Query 014172
Match_columns 429
No_of_seqs 287 out of 2567
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 02:32:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014172.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014172hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0436 Aspartate/tyrosine/aro 100.0 3.3E-63 7.2E-68 489.3 41.3 341 75-428 6-352 (393)
2 KOG0257 Kynurenine aminotransf 100.0 5.7E-59 1.2E-63 437.3 32.1 354 68-428 8-376 (420)
3 PRK07366 succinyldiaminopimela 100.0 1.5E-54 3.3E-59 431.5 40.2 347 68-428 3-352 (388)
4 PRK07681 aspartate aminotransf 100.0 6E-54 1.3E-58 428.5 40.8 345 67-428 4-350 (399)
5 PLN00175 aminotransferase fami 100.0 8E-54 1.7E-58 428.4 41.5 341 67-428 31-372 (413)
6 PRK08068 transaminase; Reviewe 100.0 2.2E-53 4.7E-58 423.2 41.0 346 67-428 4-351 (389)
7 PRK09276 LL-diaminopimelate am 100.0 4.1E-53 8.9E-58 420.8 41.1 346 67-428 3-350 (385)
8 TIGR03540 DapC_direct LL-diami 100.0 6.4E-53 1.4E-57 419.2 41.6 344 69-428 3-348 (383)
9 PRK05942 aspartate aminotransf 100.0 7.2E-53 1.6E-57 420.0 41.5 347 66-428 6-354 (394)
10 PLN02368 alanine transaminase 100.0 7.4E-54 1.6E-58 425.5 32.3 329 67-397 10-396 (407)
11 PRK13355 bifunctional HTH-doma 100.0 4.8E-53 1E-57 434.3 39.0 353 64-428 115-476 (517)
12 PRK06348 aspartate aminotransf 100.0 1.6E-52 3.4E-57 416.2 40.5 342 68-428 6-347 (384)
13 PRK08960 hypothetical protein; 100.0 2.5E-52 5.5E-57 415.3 40.4 344 67-428 4-348 (387)
14 PRK09147 succinyldiaminopimela 100.0 2.8E-52 6E-57 416.2 38.9 339 69-428 2-352 (396)
15 PTZ00377 alanine aminotransfer 100.0 1.6E-52 3.4E-57 427.0 36.9 359 67-428 9-436 (481)
16 PRK09148 aminotransferase; Val 100.0 1E-51 2.2E-56 412.8 41.2 347 69-428 4-352 (405)
17 PRK08636 aspartate aminotransf 100.0 9.7E-52 2.1E-56 413.0 40.0 347 69-428 7-362 (403)
18 PRK06107 aspartate aminotransf 100.0 1.9E-51 4.1E-56 410.8 41.6 358 67-428 5-364 (402)
19 PRK06290 aspartate aminotransf 100.0 1.6E-51 3.5E-56 411.0 40.9 340 77-428 24-368 (410)
20 PRK06855 aminotransferase; Val 100.0 6.3E-52 1.4E-56 417.2 36.6 344 80-428 17-391 (433)
21 PRK06207 aspartate aminotransf 100.0 3.4E-51 7.3E-56 408.9 39.5 320 95-428 39-364 (405)
22 PRK07337 aminotransferase; Val 100.0 4.3E-51 9.4E-56 406.6 39.5 348 67-428 2-350 (388)
23 PLN00145 tyrosine/nicotianamin 100.0 5.8E-51 1.3E-55 409.4 39.5 334 84-428 39-388 (430)
24 PRK12414 putative aminotransfe 100.0 1.2E-50 2.7E-55 402.5 40.3 319 94-428 28-347 (384)
25 TIGR03538 DapC_gpp succinyldia 100.0 8.2E-51 1.8E-55 405.2 38.5 337 71-428 3-351 (393)
26 PRK07682 hypothetical protein; 100.0 1.3E-50 2.9E-55 401.8 38.4 318 95-428 20-338 (378)
27 PRK06108 aspartate aminotransf 100.0 2.2E-50 4.7E-55 400.9 39.9 340 70-428 3-344 (382)
28 PRK09082 methionine aminotrans 100.0 1.5E-50 3.2E-55 402.4 38.0 341 68-428 8-349 (386)
29 PRK07590 L,L-diaminopimelate a 100.0 2.7E-50 5.9E-55 403.3 39.2 338 69-428 5-373 (409)
30 PRK08912 hypothetical protein; 100.0 3.1E-50 6.8E-55 400.3 39.3 341 69-428 5-346 (387)
31 PLN02187 rooty/superroot1 100.0 2.7E-50 5.9E-55 407.2 38.8 355 64-428 33-402 (462)
32 PRK08361 aspartate aminotransf 100.0 5.3E-50 1.2E-54 399.1 39.2 343 68-428 10-352 (391)
33 PRK05764 aspartate aminotransf 100.0 7E-50 1.5E-54 398.8 39.8 353 66-428 2-355 (393)
34 PRK07550 hypothetical protein; 100.0 1.2E-49 2.7E-54 395.9 40.8 345 68-428 2-348 (386)
35 PRK05957 aspartate aminotransf 100.0 3.1E-49 6.8E-54 393.1 40.9 342 66-428 2-346 (389)
36 PLN00143 tyrosine/nicotianamin 100.0 2E-49 4.3E-54 396.6 39.4 325 93-428 30-368 (409)
37 PLN02656 tyrosine transaminase 100.0 1.7E-49 3.6E-54 397.4 38.8 326 92-428 28-367 (409)
38 PRK07683 aminotransferase A; V 100.0 3.6E-49 7.8E-54 392.4 40.7 340 68-428 5-345 (387)
39 PRK08363 alanine aminotransfer 100.0 2.6E-49 5.6E-54 395.1 39.6 345 68-428 4-356 (398)
40 PRK07777 aminotransferase; Val 100.0 3.3E-49 7.3E-54 392.9 40.2 340 70-428 4-345 (387)
41 PRK07324 transaminase; Validat 100.0 3.9E-50 8.5E-55 397.1 32.6 317 87-428 18-334 (373)
42 PRK07309 aromatic amino acid a 100.0 5.2E-49 1.1E-53 391.8 39.9 342 66-428 5-350 (391)
43 PTZ00433 tyrosine aminotransfe 100.0 3.2E-49 6.8E-54 395.9 38.0 351 63-428 3-372 (412)
44 PRK07568 aspartate aminotransf 100.0 1.1E-48 2.4E-53 390.6 40.9 343 67-428 2-351 (397)
45 PRK05839 hypothetical protein; 100.0 8.3E-49 1.8E-53 387.9 38.1 324 75-428 3-334 (374)
46 PRK08175 aminotransferase; Val 100.0 1.5E-48 3.2E-53 389.2 38.8 340 73-428 7-351 (395)
47 TIGR01264 tyr_amTase_E tyrosin 100.0 1.8E-48 4E-53 389.3 38.7 337 80-428 16-363 (401)
48 TIGR03537 DapC succinyldiamino 100.0 4.2E-48 9.1E-53 379.9 37.1 310 97-428 2-315 (350)
49 PTZ00376 aspartate aminotransf 100.0 4.3E-49 9.3E-54 393.9 30.1 340 70-428 6-374 (404)
50 PRK09257 aromatic amino acid a 100.0 6E-49 1.3E-53 392.1 30.8 340 70-428 3-369 (396)
51 PRK09265 aminotransferase AlaT 100.0 1E-47 2.2E-52 384.2 39.3 349 68-428 6-363 (404)
52 PLN02231 alanine transaminase 100.0 2.2E-48 4.8E-53 397.5 34.5 328 96-428 130-488 (534)
53 KOG0259 Tyrosine aminotransfer 100.0 1.2E-47 2.6E-52 354.6 34.0 323 95-428 61-397 (447)
54 TIGR01265 tyr_nico_aTase tyros 100.0 3.5E-47 7.5E-52 380.2 39.2 339 79-428 15-365 (403)
55 PLN02450 1-aminocyclopropane-1 100.0 4.1E-48 8.9E-53 392.0 30.9 323 96-428 39-391 (468)
56 TIGR03542 DAPAT_plant LL-diami 100.0 9.9E-47 2.1E-51 376.8 38.4 336 69-428 4-366 (402)
57 PLN02397 aspartate transaminas 100.0 9.9E-48 2.1E-52 385.4 30.4 338 70-428 25-392 (423)
58 COG1167 ARO8 Transcriptional r 100.0 6.3E-47 1.4E-51 381.5 35.8 315 95-428 89-413 (459)
59 PRK09275 aspartate aminotransf 100.0 1.3E-47 2.7E-52 387.0 30.6 320 96-428 101-479 (527)
60 PRK07865 N-succinyldiaminopime 100.0 3E-46 6.5E-51 368.7 37.4 325 66-428 1-330 (364)
61 PRK15481 transcriptional regul 100.0 6.6E-47 1.4E-51 381.4 33.1 306 95-428 85-391 (431)
62 TIGR03539 DapC_actino succinyl 100.0 4.5E-46 9.8E-51 366.4 37.5 319 76-428 2-324 (357)
63 PLN02376 1-aminocyclopropane-1 100.0 6.1E-47 1.3E-51 384.8 31.1 326 96-429 47-400 (496)
64 COG1168 MalY Bifunctional PLP- 100.0 6.4E-46 1.4E-50 346.0 33.6 319 95-429 25-349 (388)
65 PRK01533 histidinol-phosphate 100.0 1.2E-46 2.6E-51 370.8 29.7 299 93-428 27-325 (366)
66 PRK02610 histidinol-phosphate 100.0 7.6E-46 1.6E-50 366.9 32.9 304 96-428 29-341 (374)
67 PLN02607 1-aminocyclopropane-1 100.0 6.1E-46 1.3E-50 373.4 31.3 324 96-429 48-399 (447)
68 TIGR03801 asp_4_decarbox aspar 100.0 1.3E-45 2.9E-50 371.8 30.6 320 96-428 95-478 (521)
69 PRK06358 threonine-phosphate d 100.0 4.2E-45 9E-50 358.9 33.4 300 94-428 18-318 (354)
70 PRK06836 aspartate aminotransf 100.0 6E-44 1.3E-48 355.7 39.6 322 80-428 16-355 (394)
71 PLN03026 histidinol-phosphate 100.0 9E-45 2E-49 359.6 31.1 322 68-428 24-347 (380)
72 PRK14809 histidinol-phosphate 100.0 3.3E-44 7.2E-49 353.3 32.2 305 83-428 18-322 (357)
73 PRK08056 threonine-phosphate d 100.0 3.9E-44 8.5E-49 352.5 32.1 307 86-428 11-318 (356)
74 PF00155 Aminotran_1_2: Aminot 100.0 3.9E-45 8.4E-50 360.7 23.6 316 96-428 2-332 (363)
75 PRK03317 histidinol-phosphate 100.0 6.6E-44 1.4E-48 352.5 31.3 302 96-428 27-332 (368)
76 PRK03158 histidinol-phosphate 100.0 4.2E-44 9.2E-49 352.8 29.8 298 95-428 29-326 (359)
77 PRK07392 threonine-phosphate d 100.0 1.6E-43 3.4E-48 348.7 33.8 298 95-428 22-322 (360)
78 PRK09440 avtA valine--pyruvate 100.0 2.2E-43 4.8E-48 354.4 34.9 314 95-428 30-366 (416)
79 PLN02672 methionine S-methyltr 100.0 1E-43 2.2E-48 378.5 34.0 329 93-429 695-1045(1082)
80 PRK09105 putative aminotransfe 100.0 1.5E-43 3.2E-48 349.6 31.1 294 95-428 43-336 (370)
81 PRK05166 histidinol-phosphate 100.0 1.1E-43 2.4E-48 351.2 29.9 301 93-428 34-336 (371)
82 COG0079 HisC Histidinol-phosph 100.0 7.9E-43 1.7E-47 338.7 30.6 296 96-428 23-318 (356)
83 PRK08153 histidinol-phosphate 100.0 1.3E-42 2.7E-47 343.2 32.6 300 93-428 29-330 (369)
84 PRK05387 histidinol-phosphate 100.0 6.8E-43 1.5E-47 343.5 30.5 294 95-428 24-318 (353)
85 PRK08637 hypothetical protein; 100.0 9E-43 2E-47 346.6 31.2 316 97-428 5-353 (388)
86 PRK02731 histidinol-phosphate 100.0 1.9E-42 4.2E-47 342.1 31.2 324 69-428 7-331 (367)
87 PRK14808 histidinol-phosphate 100.0 3.6E-42 7.8E-47 335.3 30.7 290 93-428 17-307 (335)
88 PRK06225 aspartate aminotransf 100.0 2.7E-41 6E-46 335.3 37.5 328 73-428 7-337 (380)
89 PRK14807 histidinol-phosphate 100.0 1.1E-41 2.3E-46 334.6 33.1 292 96-428 23-316 (351)
90 PRK04870 histidinol-phosphate 100.0 4.7E-42 1E-46 337.9 30.5 294 94-428 25-321 (356)
91 PRK01688 histidinol-phosphate 100.0 2.9E-42 6.2E-47 338.4 26.0 291 96-428 29-320 (351)
92 PRK04781 histidinol-phosphate 100.0 2.2E-41 4.8E-46 333.6 30.1 293 96-428 32-327 (364)
93 PRK03321 putative aminotransfe 100.0 3E-41 6.5E-46 331.7 28.8 298 96-428 23-320 (352)
94 PRK06425 histidinol-phosphate 100.0 7.5E-41 1.6E-45 326.0 28.5 280 96-428 17-296 (332)
95 KOG0634 Aromatic amino acid am 100.0 1.4E-40 3.1E-45 312.8 26.6 295 125-428 93-422 (472)
96 PRK07908 hypothetical protein; 100.0 7.5E-40 1.6E-44 321.3 33.0 290 94-428 21-310 (349)
97 PRK00950 histidinol-phosphate 100.0 3.4E-40 7.4E-45 325.3 30.7 299 87-428 26-325 (361)
98 TIGR01141 hisC histidinol-phos 100.0 2.5E-40 5.5E-45 324.4 29.6 297 95-428 19-315 (346)
99 PRK04635 histidinol-phosphate 100.0 1.1E-40 2.4E-45 327.7 26.9 289 95-428 31-320 (354)
100 PRK06959 putative threonine-ph 100.0 3E-40 6.5E-45 322.2 27.0 276 96-428 25-300 (339)
101 PRK03967 histidinol-phosphate 100.0 1.4E-39 3.1E-44 317.6 29.9 282 95-428 18-300 (337)
102 PRK05664 threonine-phosphate d 100.0 2.5E-39 5.4E-44 314.9 30.4 272 96-428 21-295 (330)
103 TIGR01140 L_thr_O3P_dcar L-thr 100.0 5.3E-39 1.1E-43 312.7 28.6 294 83-428 5-298 (330)
104 PRK13238 tnaA tryptophanase/L- 100.0 2E-38 4.3E-43 319.0 30.5 333 70-428 11-381 (460)
105 KOG0256 1-aminocyclopropane-1- 100.0 1.1E-38 2.3E-43 297.9 25.2 295 126-429 115-423 (471)
106 PRK08354 putative aminotransfe 100.0 2E-37 4.4E-42 299.1 31.0 269 96-428 9-277 (311)
107 cd00609 AAT_like Aspartate ami 100.0 4.7E-34 1E-38 279.4 36.8 314 98-428 1-316 (350)
108 cd00617 Tnase_like Tryptophana 100.0 2.6E-35 5.6E-40 292.6 27.8 317 86-428 2-356 (431)
109 KOG0258 Alanine aminotransfera 100.0 3.4E-32 7.4E-37 252.6 21.5 359 68-428 13-433 (475)
110 PRK06939 2-amino-3-ketobutyrat 100.0 3.9E-31 8.4E-36 264.0 29.6 301 93-428 40-352 (397)
111 COG3977 Alanine-alpha-ketoisov 100.0 6E-31 1.3E-35 236.6 27.0 326 82-428 18-366 (417)
112 TIGR01822 2am3keto_CoA 2-amino 100.0 7.8E-31 1.7E-35 261.6 30.8 296 93-428 36-348 (393)
113 PLN02822 serine palmitoyltrans 100.0 5.2E-31 1.1E-35 267.4 27.9 314 93-429 107-435 (481)
114 TIGR00858 bioF 8-amino-7-oxono 100.0 2.1E-30 4.6E-35 255.1 30.5 300 92-428 13-324 (360)
115 TIGR03576 pyridox_MJ0158 pyrid 100.0 5E-30 1.1E-34 250.0 32.6 274 106-428 31-307 (346)
116 TIGR01825 gly_Cac_T_rel pyrido 100.0 3.2E-30 7E-35 256.5 30.4 300 93-428 31-340 (385)
117 COG1448 TyrB Aspartate/tyrosin 100.0 1E-30 2.2E-35 244.4 24.2 336 70-428 3-369 (396)
118 PRK10534 L-threonine aldolase; 100.0 2.1E-30 4.6E-35 252.7 23.1 289 97-428 1-301 (333)
119 KOG0633 Histidinol phosphate a 100.0 1.5E-30 3.2E-35 229.9 18.1 299 93-428 39-341 (375)
120 PRK05958 8-amino-7-oxononanoat 100.0 1.5E-28 3.2E-33 244.4 30.3 299 93-428 37-346 (385)
121 PRK13392 5-aminolevulinate syn 100.0 4.7E-28 1E-32 242.8 27.5 295 94-428 45-356 (410)
122 PRK10874 cysteine sulfinate de 100.0 2.5E-27 5.4E-32 237.0 31.8 296 96-428 19-352 (401)
123 cd00613 GDC-P Glycine cleavage 100.0 1.1E-27 2.5E-32 239.2 29.1 300 95-428 20-367 (398)
124 PLN02721 threonine aldolase 100.0 7.9E-28 1.7E-32 236.4 27.3 296 97-428 7-318 (353)
125 TIGR03392 FeS_syn_CsdA cystein 100.0 2.3E-27 5E-32 237.0 30.2 296 96-428 16-349 (398)
126 cd00378 SHMT Serine-glycine hy 100.0 2.1E-27 4.6E-32 237.6 29.9 301 95-428 19-337 (402)
127 cd06454 KBL_like KBL_like; thi 100.0 2.5E-27 5.4E-32 232.4 29.1 297 96-428 2-310 (349)
128 PRK02627 acetylornithine amino 100.0 2.3E-27 4.9E-32 236.9 27.9 305 93-428 37-360 (396)
129 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 7.5E-27 1.6E-31 230.2 29.4 292 106-427 10-327 (361)
130 TIGR00707 argD acetylornithine 100.0 2.6E-27 5.5E-32 235.1 26.3 303 93-428 25-347 (379)
131 PLN02483 serine palmitoyltrans 100.0 5.4E-27 1.2E-31 238.6 28.4 299 94-428 99-425 (489)
132 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 3.7E-27 8E-32 233.0 26.4 263 135-427 54-333 (370)
133 cd06502 TA_like Low-specificit 100.0 2.6E-27 5.6E-32 231.3 24.7 268 104-397 5-284 (338)
134 TIGR01979 sufS cysteine desulf 100.0 3.4E-26 7.3E-31 229.0 31.4 295 94-428 16-355 (403)
135 PRK09295 bifunctional cysteine 100.0 3.9E-26 8.5E-31 228.7 30.4 294 96-428 23-358 (406)
136 PRK07049 methionine gamma-lyas 100.0 1.6E-26 3.4E-31 231.4 27.2 226 126-383 78-316 (427)
137 PRK07179 hypothetical protein; 100.0 3.3E-26 7.2E-31 229.2 29.6 294 93-427 52-356 (407)
138 TIGR01821 5aminolev_synth 5-am 100.0 2.8E-26 6E-31 229.4 29.0 300 94-428 44-355 (402)
139 PLN02855 Bifunctional selenocy 100.0 4.2E-26 9E-31 229.7 29.2 299 94-428 30-372 (424)
140 PRK09064 5-aminolevulinate syn 100.0 7.3E-26 1.6E-30 226.8 29.2 295 94-428 45-356 (407)
141 TIGR01976 am_tr_V_VC1184 cyste 100.0 9.3E-26 2E-30 225.3 29.8 299 97-428 18-354 (397)
142 PRK00451 glycine dehydrogenase 99.9 9.4E-26 2E-30 228.7 28.5 304 82-424 51-404 (447)
143 PLN02242 methionine gamma-lyas 99.9 3.8E-26 8.2E-31 227.8 24.9 222 130-386 74-304 (418)
144 PRK01278 argD acetylornithine 99.9 1.9E-25 4.1E-30 222.4 29.1 305 93-428 29-354 (389)
145 PRK06234 methionine gamma-lyas 99.9 7.4E-26 1.6E-30 225.2 25.8 245 103-382 28-288 (400)
146 PRK03244 argD acetylornithine 99.9 1E-25 2.2E-30 225.1 25.5 296 93-428 41-360 (398)
147 cd06451 AGAT_like Alanine-glyo 99.9 4.8E-25 1E-29 217.0 28.6 287 107-428 8-319 (356)
148 PRK08247 cystathionine gamma-s 99.9 4E-25 8.7E-30 217.8 27.5 234 126-397 47-288 (366)
149 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 7.6E-25 1.7E-29 217.7 29.6 303 96-427 19-346 (387)
150 PRK02948 cysteine desulfurase; 99.9 1.9E-25 4.1E-30 221.9 24.3 295 98-428 2-317 (381)
151 cd06453 SufS_like Cysteine des 99.9 1.1E-24 2.4E-29 215.7 28.7 281 109-428 11-333 (373)
152 PRK13393 5-aminolevulinate syn 99.9 4.4E-24 9.5E-29 213.8 31.5 299 94-428 44-355 (406)
153 PLN02409 serine--glyoxylate am 99.9 1.4E-24 3E-29 216.7 27.6 287 107-428 18-334 (401)
154 cd06450 DOPA_deC_like DOPA dec 99.9 4.6E-25 1E-29 216.1 23.5 277 110-427 12-309 (345)
155 PRK00011 glyA serine hydroxyme 99.9 6.6E-24 1.4E-28 213.3 30.1 300 95-428 25-341 (416)
156 cd00610 OAT_like Acetyl ornith 99.9 1.8E-24 3.9E-29 217.2 25.9 316 93-428 34-381 (413)
157 TIGR01437 selA_rel uncharacter 99.9 5.6E-24 1.2E-28 209.3 28.4 243 109-385 25-289 (363)
158 TIGR03403 nifS_epsilon cystein 99.9 3.1E-24 6.7E-29 213.3 26.5 286 109-429 11-319 (382)
159 TIGR01977 am_tr_V_EF2568 cyste 99.9 3.6E-24 7.8E-29 212.3 26.7 296 99-428 2-331 (376)
160 PRK13520 L-tyrosine decarboxyl 99.9 1.8E-23 3.8E-28 207.0 31.2 317 82-428 6-336 (371)
161 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 1E-23 2.2E-28 207.2 29.0 289 106-428 7-320 (355)
162 PRK06460 hypothetical protein; 99.9 3.9E-24 8.5E-29 211.2 25.8 218 130-382 43-265 (376)
163 PRK08133 O-succinylhomoserine 99.9 4.1E-24 8.8E-29 212.1 25.9 216 133-383 62-282 (390)
164 PRK05093 argD bifunctional N-s 99.9 1.1E-23 2.4E-28 210.6 29.2 300 93-428 38-366 (403)
165 PRK06767 methionine gamma-lyas 99.9 7.3E-24 1.6E-28 210.2 26.7 219 130-383 59-283 (386)
166 PRK02936 argD acetylornithine 99.9 1.2E-23 2.6E-28 208.7 27.6 304 92-428 26-345 (377)
167 TIGR02379 ECA_wecE TDP-4-keto- 99.9 3.7E-23 8E-28 204.1 30.0 194 110-329 10-208 (376)
168 PRK04073 rocD ornithine--oxo-a 99.9 1.4E-23 3.1E-28 209.3 27.4 297 93-428 38-363 (396)
169 PRK08249 cystathionine gamma-s 99.9 8.8E-24 1.9E-28 209.8 25.4 218 130-382 62-284 (398)
170 PLN03227 serine palmitoyltrans 99.9 1.5E-23 3.3E-28 208.2 26.6 256 99-377 2-280 (392)
171 PRK08045 cystathionine gamma-s 99.9 1.7E-23 3.7E-28 207.0 26.6 222 125-382 46-273 (386)
172 TIGR00713 hemL glutamate-1-sem 99.9 1.6E-23 3.4E-28 210.9 25.4 315 92-428 45-390 (423)
173 PRK07504 O-succinylhomoserine 99.9 3E-23 6.5E-28 206.3 26.4 249 96-382 30-286 (398)
174 TIGR02080 O_succ_thio_ly O-suc 99.9 2.7E-23 5.9E-28 205.3 25.7 222 125-382 45-272 (382)
175 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 1.3E-22 2.7E-27 200.9 30.5 277 111-428 11-316 (375)
176 TIGR01325 O_suc_HS_sulf O-succ 99.9 4E-23 8.6E-28 204.5 26.6 222 126-383 49-275 (380)
177 PRK07810 O-succinylhomoserine 99.9 2.6E-23 5.6E-28 206.8 25.2 222 126-383 65-292 (403)
178 COG0156 BioF 7-keto-8-aminopel 99.9 1.1E-22 2.4E-27 197.4 29.0 300 94-429 38-350 (388)
179 TIGR02326 transamin_PhnW 2-ami 99.9 6.1E-23 1.3E-27 202.6 27.7 267 134-428 33-325 (363)
180 COG0520 csdA Selenocysteine ly 99.9 3.3E-22 7.1E-27 197.7 32.5 296 94-428 20-359 (405)
181 KOG1412 Aspartate aminotransfe 99.9 1.7E-23 3.8E-28 189.5 20.5 319 93-428 28-376 (410)
182 TIGR01328 met_gam_lyase methio 99.9 3.4E-23 7.3E-28 205.4 24.4 218 130-382 57-281 (391)
183 PRK11658 UDP-4-amino-4-deoxy-L 99.9 2.4E-22 5.3E-27 199.0 30.3 277 111-428 14-320 (379)
184 PRK13479 2-aminoethylphosphona 99.9 1E-22 2.2E-27 201.4 27.1 288 107-428 14-326 (368)
185 PRK07503 methionine gamma-lyas 99.9 6.4E-23 1.4E-27 204.2 25.0 219 130-383 63-288 (403)
186 PF12897 Aminotran_MocR: Alani 99.9 5.5E-23 1.2E-27 193.0 22.6 281 125-428 61-372 (425)
187 cd00614 CGS_like CGS_like: Cys 99.9 1.1E-22 2.3E-27 201.0 26.0 218 130-382 38-261 (369)
188 TIGR03235 DNA_S_dndA cysteine 99.9 1.6E-22 3.4E-27 198.9 26.6 281 108-428 9-318 (353)
189 PRK07811 cystathionine gamma-s 99.9 1.7E-22 3.6E-27 200.4 26.9 218 130-382 59-282 (388)
190 PRK08861 cystathionine gamma-s 99.9 1.8E-22 3.8E-27 199.2 26.2 221 126-382 48-274 (388)
191 TIGR03402 FeS_nifS cysteine de 99.9 2.4E-22 5.2E-27 199.5 27.2 284 108-428 10-315 (379)
192 TIGR03812 tyr_de_CO2_Arch tyro 99.9 7.5E-22 1.6E-26 195.5 30.6 287 111-428 34-341 (373)
193 PRK00854 rocD ornithine--oxo-a 99.9 1.3E-22 2.8E-27 203.0 25.0 300 93-428 39-367 (401)
194 PRK08776 cystathionine gamma-s 99.9 2.7E-22 5.8E-27 199.5 27.0 215 133-382 61-281 (405)
195 PRK04260 acetylornithine amino 99.9 5.1E-22 1.1E-26 196.8 28.2 304 93-428 27-343 (375)
196 PRK09028 cystathionine beta-ly 99.9 3.5E-22 7.5E-27 197.0 26.2 241 106-382 34-281 (394)
197 PRK14012 cysteine desulfurase; 99.9 2.4E-22 5.2E-27 201.1 24.8 262 97-384 4-290 (404)
198 PRK08574 cystathionine gamma-s 99.9 4.3E-22 9.3E-27 197.0 25.6 217 130-382 51-273 (385)
199 KOG1411 Aspartate aminotransfe 99.9 4.7E-23 1E-27 189.2 16.6 341 69-428 28-396 (427)
200 TIGR02006 IscS cysteine desulf 99.9 7.7E-22 1.7E-26 197.3 26.4 262 97-384 4-288 (402)
201 PRK08088 4-aminobutyrate amino 99.9 5.7E-22 1.2E-26 199.4 25.6 321 92-428 38-387 (425)
202 PRK07582 cystathionine gamma-l 99.9 5.8E-22 1.3E-26 195.1 24.6 217 126-382 46-268 (366)
203 PRK07050 cystathionine beta-ly 99.9 6E-22 1.3E-26 196.6 24.4 221 126-382 60-286 (394)
204 PLN02651 cysteine desulfurase 99.9 1.4E-21 3E-26 192.9 26.4 288 100-421 3-315 (364)
205 PRK12381 bifunctional succinyl 99.9 4.4E-21 9.6E-26 191.8 28.4 307 93-428 37-365 (406)
206 PRK05939 hypothetical protein; 99.9 5.1E-21 1.1E-25 189.9 27.9 212 136-382 51-288 (397)
207 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 1.7E-21 3.8E-26 195.0 23.9 161 130-318 55-219 (418)
208 cd00616 AHBA_syn 3-amino-5-hyd 99.9 2.7E-20 5.8E-25 182.8 30.3 270 115-428 3-296 (352)
209 PRK07269 cystathionine gamma-s 99.9 7E-21 1.5E-25 186.9 25.8 233 126-394 49-286 (364)
210 TIGR03588 PseC UDP-4-keto-6-de 99.9 4.2E-20 9E-25 183.5 31.1 276 110-428 9-323 (380)
211 cd00615 Orn_deC_like Ornithine 99.9 9.6E-22 2.1E-26 188.2 18.6 221 134-375 61-292 (294)
212 PTZ00125 ornithine aminotransf 99.9 1.2E-20 2.6E-25 188.7 27.3 308 93-428 29-361 (400)
213 PRK05968 hypothetical protein; 99.9 8.7E-21 1.9E-25 188.2 25.9 216 133-384 64-285 (389)
214 PRK04366 glycine dehydrogenase 99.9 2.3E-20 5E-25 190.0 29.3 321 82-428 53-409 (481)
215 PRK07505 hypothetical protein; 99.9 3.4E-20 7.3E-25 185.5 29.3 298 93-428 44-358 (402)
216 PLN02955 8-amino-7-oxononanoat 99.9 3.4E-20 7.3E-25 184.2 28.8 290 94-429 101-421 (476)
217 TIGR03246 arg_catab_astC succi 99.9 3.6E-20 7.9E-25 184.7 28.7 300 93-428 33-361 (397)
218 COG0399 WecE Predicted pyridox 99.9 6.2E-20 1.3E-24 177.0 29.0 272 110-427 14-311 (374)
219 PRK15407 lipopolysaccharide bi 99.9 2.1E-19 4.4E-24 180.5 33.6 202 97-326 25-244 (438)
220 PRK08248 O-acetylhomoserine am 99.9 1.4E-20 3.1E-25 188.3 25.0 216 132-382 64-317 (431)
221 TIGR01324 cysta_beta_ly_B cyst 99.9 4.4E-20 9.4E-25 182.0 26.3 212 135-381 53-269 (377)
222 PRK05967 cystathionine beta-ly 99.9 2.7E-20 5.9E-25 183.2 24.7 220 132-382 60-284 (395)
223 PRK06084 O-acetylhomoserine am 99.9 2.8E-20 6E-25 186.1 25.1 216 132-382 58-312 (425)
224 COG1104 NifS Cysteine sulfinat 99.9 2.7E-20 5.9E-25 177.9 23.1 284 108-429 12-321 (386)
225 PLN02509 cystathionine beta-ly 99.9 5.7E-20 1.2E-24 184.4 26.6 224 125-382 124-353 (464)
226 PRK07671 cystathionine beta-ly 99.9 6.5E-20 1.4E-24 181.1 25.9 217 131-383 49-271 (377)
227 PRK06702 O-acetylhomoserine am 99.9 3.7E-20 8.1E-25 184.2 24.2 217 133-383 62-315 (432)
228 PLN00144 acetylornithine trans 99.9 1.2E-19 2.7E-24 179.7 26.5 305 93-428 13-345 (382)
229 PRK08064 cystathionine beta-ly 99.9 9.6E-20 2.1E-24 180.8 25.7 212 134-381 56-273 (390)
230 TIGR02618 tyr_phenol_ly tyrosi 99.9 2.8E-19 6E-24 175.4 28.4 318 83-427 17-373 (450)
231 TIGR01329 cysta_beta_ly_E cyst 99.9 1.9E-19 4E-24 178.1 26.6 222 126-381 39-266 (378)
232 PRK00062 glutamate-1-semialdeh 99.9 7.9E-20 1.7E-24 183.7 24.2 312 93-428 48-392 (426)
233 PF00266 Aminotran_5: Aminotra 99.9 2.6E-19 5.7E-24 177.2 26.1 287 108-428 10-335 (371)
234 PRK09792 4-aminobutyrate trans 99.8 6.6E-19 1.4E-23 176.6 28.3 318 92-428 37-385 (421)
235 TIGR01885 Orn_aminotrans ornit 99.8 6.1E-19 1.3E-23 176.3 26.2 302 93-428 35-368 (401)
236 PRK06176 cystathionine gamma-s 99.8 5.4E-19 1.2E-23 174.7 25.4 214 133-382 51-270 (380)
237 PRK05937 8-amino-7-oxononanoat 99.8 2.1E-18 4.5E-23 170.6 28.0 260 96-377 5-283 (370)
238 PRK06777 4-aminobutyrate amino 99.8 1.4E-18 3E-23 174.3 26.6 287 93-393 38-356 (421)
239 PF01041 DegT_DnrJ_EryC1: DegT 99.8 2.5E-18 5.3E-23 169.6 27.6 274 111-428 5-306 (363)
240 PLN02624 ornithine-delta-amino 99.8 2.1E-18 4.5E-23 175.2 27.2 303 93-428 73-410 (474)
241 TIGR03531 selenium_SpcS O-phos 99.8 4.4E-18 9.5E-23 169.2 28.8 265 134-423 103-384 (444)
242 TIGR00700 GABAtrnsam 4-aminobu 99.8 2.2E-18 4.8E-23 173.0 26.5 294 92-396 30-357 (420)
243 PRK04612 argD acetylornithine 99.8 5.9E-18 1.3E-22 168.7 28.4 308 92-428 37-369 (408)
244 PRK13237 tyrosine phenol-lyase 99.8 1.1E-17 2.4E-22 164.7 29.6 320 83-427 24-380 (460)
245 TIGR01814 kynureninase kynuren 99.8 4.3E-18 9.4E-23 170.5 26.5 295 95-428 26-372 (406)
246 PRK06918 4-aminobutyrate amino 99.8 5E-18 1.1E-22 171.8 27.1 290 93-396 52-380 (451)
247 PRK13034 serine hydroxymethylt 99.8 1.4E-17 3.1E-22 166.7 29.4 301 95-428 28-344 (416)
248 PRK05994 O-acetylhomoserine am 99.8 4.3E-18 9.3E-23 170.7 25.2 214 134-382 65-316 (427)
249 PRK08360 4-aminobutyrate amino 99.8 2.5E-17 5.4E-22 165.8 29.9 317 92-428 38-392 (443)
250 PRK08134 O-acetylhomoserine am 99.8 6.5E-18 1.4E-22 169.2 25.3 156 133-316 65-224 (433)
251 PRK08114 cystathionine beta-ly 99.8 1.9E-17 4.2E-22 163.0 24.7 215 134-382 64-284 (395)
252 KOG1549 Cysteine desulfurase N 99.8 6.1E-18 1.3E-22 162.4 20.4 204 92-318 39-257 (428)
253 COG0075 Serine-pyruvate aminot 99.8 7.2E-17 1.6E-21 155.6 27.7 287 107-428 14-325 (383)
254 PRK07812 O-acetylhomoserine am 99.8 2.3E-17 4.9E-22 165.1 24.9 215 134-382 71-321 (436)
255 PRK13580 serine hydroxymethylt 99.8 3.6E-17 7.7E-22 162.9 26.0 306 95-429 49-398 (493)
256 cd01494 AAT_I Aspartate aminot 99.8 6E-18 1.3E-22 147.7 16.9 165 135-316 3-169 (170)
257 KOG1360 5-aminolevulinate synt 99.8 2.1E-17 4.5E-22 154.8 20.9 332 61-428 126-483 (570)
258 PTZ00094 serine hydroxymethylt 99.8 1.3E-16 2.8E-21 161.6 28.2 302 95-429 34-362 (452)
259 COG2008 GLY1 Threonine aldolas 99.8 3.2E-17 7E-22 153.7 21.5 265 107-398 10-291 (342)
260 PRK07495 4-aminobutyrate amino 99.8 1.6E-16 3.6E-21 159.2 27.8 315 92-428 37-385 (425)
261 TIGR01788 Glu-decarb-GAD gluta 99.8 1.5E-16 3.3E-21 158.8 26.0 300 110-428 54-388 (431)
262 COG4992 ArgD Ornithine/acetylo 99.8 1.5E-16 3.3E-21 152.1 23.9 300 92-428 39-364 (404)
263 TIGR02407 ectoine_ectB diamino 99.8 3.3E-16 7.2E-21 156.7 27.3 312 92-428 32-376 (412)
264 PRK02769 histidine decarboxyla 99.8 9.7E-16 2.1E-20 151.0 30.2 249 134-397 63-329 (380)
265 PLN02271 serine hydroxymethylt 99.8 1.5E-15 3.2E-20 152.0 29.8 304 95-429 148-494 (586)
266 KOG1359 Glycine C-acetyltransf 99.8 1.7E-16 3.6E-21 143.3 20.7 296 94-428 66-371 (417)
267 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 7.2E-16 1.6E-20 151.6 27.2 213 135-382 58-278 (386)
268 PRK08117 4-aminobutyrate amino 99.8 5.5E-16 1.2E-20 156.4 26.9 315 93-428 41-393 (433)
269 PRK06058 4-aminobutyrate amino 99.7 9.9E-16 2.2E-20 154.7 28.3 316 92-428 53-406 (443)
270 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 2.5E-16 5.4E-21 154.2 21.1 233 135-386 69-328 (417)
271 PRK04311 selenocysteine syntha 99.7 3.8E-15 8.2E-20 149.8 30.1 250 109-378 98-376 (464)
272 PRK09264 diaminobutyrate--2-ox 99.7 1.5E-15 3.3E-20 152.6 26.9 312 93-428 37-380 (425)
273 PLN03226 serine hydroxymethylt 99.7 3.4E-15 7.5E-20 151.1 29.5 303 95-429 34-373 (475)
274 PRK05613 O-acetylhomoserine am 99.7 9.1E-16 2E-20 153.7 25.0 215 134-382 71-326 (437)
275 PRK05964 adenosylmethionine--8 99.7 2.1E-15 4.7E-20 151.6 27.0 315 93-428 40-389 (423)
276 KOG1368 Threonine aldolase [Am 99.7 6.7E-16 1.4E-20 139.8 19.4 296 97-428 23-334 (384)
277 PF00464 SHMT: Serine hydroxym 99.7 2E-15 4.3E-20 147.4 22.9 303 96-429 21-359 (399)
278 PLN03032 serine decarboxylase; 99.7 2.1E-15 4.5E-20 147.7 22.8 267 113-396 39-331 (374)
279 TIGR00474 selA seryl-tRNA(sec) 99.7 2.2E-14 4.7E-19 143.9 30.0 198 109-326 93-310 (454)
280 COG0626 MetC Cystathionine bet 99.7 9.8E-15 2.1E-19 142.0 26.2 217 131-382 62-286 (396)
281 PRK06434 cystathionine gamma-l 99.7 4.4E-15 9.6E-20 146.3 23.7 213 132-382 64-282 (384)
282 PRK03715 argD acetylornithine 99.7 1.5E-14 3.2E-19 143.9 27.5 283 93-397 34-338 (395)
283 COG0112 GlyA Glycine/serine hy 99.7 3.5E-14 7.7E-19 134.2 26.7 301 96-429 27-343 (413)
284 PLN02414 glycine dehydrogenase 99.7 1.6E-14 3.5E-19 155.3 27.1 276 126-427 555-869 (993)
285 PLN02724 Molybdenum cofactor s 99.7 1.3E-14 2.9E-19 156.3 26.4 304 97-428 35-415 (805)
286 PRK08593 4-aminobutyrate amino 99.7 4.9E-14 1.1E-18 142.2 28.8 317 93-428 40-395 (445)
287 TIGR00709 dat 2,4-diaminobutyr 99.7 4.9E-14 1.1E-18 142.3 28.8 290 92-396 36-365 (442)
288 PF01212 Beta_elim_lyase: Beta 99.7 4E-17 8.6E-22 154.6 5.2 251 109-386 7-277 (290)
289 TIGR03372 putres_am_tran putre 99.7 4.2E-14 9.1E-19 141.9 27.1 307 93-428 73-408 (442)
290 PRK06541 hypothetical protein; 99.7 3.9E-14 8.4E-19 143.3 26.9 288 93-396 50-385 (460)
291 COG0076 GadB Glutamate decarbo 99.7 6.1E-14 1.3E-18 140.6 27.2 277 109-398 74-381 (460)
292 TIGR01364 serC_1 phosphoserine 99.7 6.6E-14 1.4E-18 136.9 26.3 262 109-397 3-293 (349)
293 COG0001 HemL Glutamate-1-semia 99.7 5.9E-14 1.3E-18 135.8 25.2 311 93-428 51-396 (432)
294 KOG0053 Cystathionine beta-lya 99.6 6.9E-14 1.5E-18 134.5 24.1 216 132-382 77-298 (409)
295 cd00611 PSAT_like Phosphoserin 99.6 2.4E-14 5.1E-19 140.8 21.6 250 106-381 7-281 (355)
296 PRK11522 putrescine--2-oxoglut 99.6 2.3E-13 5.1E-18 137.4 26.7 306 93-428 80-415 (459)
297 PLN02482 glutamate-1-semialdeh 99.6 2.1E-13 4.6E-18 138.0 26.4 258 93-377 97-386 (474)
298 PF04864 Alliinase_C: Allinase 99.6 7.5E-15 1.6E-19 136.8 14.3 291 98-427 1-327 (363)
299 COG0160 GabT 4-aminobutyrate a 99.6 2.3E-13 4.9E-18 134.1 25.6 315 93-428 54-409 (447)
300 PRK13578 ornithine decarboxyla 99.6 7.4E-14 1.6E-18 145.0 23.1 156 154-318 189-370 (720)
301 PRK05355 3-phosphoserine/phosp 99.6 2.4E-13 5.2E-18 133.6 24.7 284 107-428 12-322 (360)
302 PRK03080 phosphoserine aminotr 99.6 1.9E-13 4.1E-18 135.5 23.8 279 108-428 22-335 (378)
303 PRK15029 arginine decarboxylas 99.6 1.9E-13 4.1E-18 143.3 24.5 165 135-313 208-395 (755)
304 COG2873 MET17 O-acetylhomoseri 99.6 2.2E-13 4.8E-18 127.6 21.2 219 131-384 61-317 (426)
305 PRK07482 hypothetical protein; 99.6 9.1E-13 2E-17 133.5 27.6 318 93-428 48-419 (461)
306 PRK00615 glutamate-1-semialdeh 99.6 4E-13 8.8E-18 134.7 24.6 313 92-428 50-396 (433)
307 PRK04013 argD acetylornithine/ 99.6 4.8E-13 1E-17 131.2 24.4 232 93-349 22-272 (364)
308 PRK12389 glutamate-1-semialdeh 99.6 1.4E-12 3.1E-17 131.2 28.4 243 92-349 50-317 (428)
309 KOG2862 Alanine-glyoxylate ami 99.6 9.9E-13 2.1E-17 120.2 24.1 285 110-428 29-343 (385)
310 PRK05769 4-aminobutyrate amino 99.6 1.7E-12 3.7E-17 130.9 28.3 314 92-428 51-405 (441)
311 PRK07986 adenosylmethionine--8 99.6 6.8E-13 1.5E-17 133.0 25.0 308 93-428 41-390 (428)
312 TIGR02617 tnaA_trp_ase tryptop 99.6 6.4E-13 1.4E-17 129.7 23.5 317 84-427 21-388 (467)
313 PRK07046 aminotransferase; Val 99.6 3E-12 6.5E-17 129.3 29.1 261 93-378 73-368 (453)
314 PLN02263 serine decarboxylase 99.6 3.8E-12 8.2E-17 126.8 29.0 250 133-393 130-396 (470)
315 PLN02880 tyrosine decarboxylas 99.6 1.8E-12 3.9E-17 132.0 27.0 276 111-397 97-418 (490)
316 PRK07678 aminotransferase; Val 99.6 2E-12 4.3E-17 130.8 26.4 319 93-428 45-409 (451)
317 PLN02760 4-aminobutyrate:pyruv 99.6 2.3E-12 5E-17 131.5 26.7 319 93-428 87-458 (504)
318 PRK05965 hypothetical protein; 99.5 2.9E-12 6.3E-17 129.8 26.8 320 92-428 43-413 (459)
319 PLN02590 probable tyrosine dec 99.5 5.3E-12 1.2E-16 128.8 27.5 276 111-396 145-465 (539)
320 PRK12403 putative aminotransfe 99.5 1.1E-11 2.3E-16 125.8 29.4 247 93-349 52-342 (460)
321 PRK06062 hypothetical protein; 99.5 8.8E-12 1.9E-16 126.0 28.2 247 92-349 50-332 (451)
322 PRK06173 adenosylmethionine--8 99.5 3.5E-12 7.5E-17 128.1 24.8 307 93-428 42-392 (429)
323 COG1103 Archaea-specific pyrid 99.5 1.6E-12 3.5E-17 116.6 19.8 173 134-327 63-242 (382)
324 TIGR00461 gcvP glycine dehydro 99.5 7.7E-12 1.7E-16 133.3 28.1 276 125-427 516-829 (939)
325 PRK06082 4-aminobutyrate amino 99.5 1.1E-11 2.3E-16 125.6 28.0 315 93-428 70-417 (459)
326 PRK06105 aminotransferase; Pro 99.5 8.8E-12 1.9E-16 126.4 27.3 320 92-428 45-416 (460)
327 PRK05639 4-aminobutyrate amino 99.5 1.4E-11 3.1E-16 124.5 28.6 313 93-428 51-407 (457)
328 PRK05630 adenosylmethionine--8 99.5 8.5E-12 1.8E-16 125.1 26.5 309 92-428 37-387 (422)
329 PRK06917 hypothetical protein; 99.5 2E-11 4.4E-16 123.2 29.0 319 92-428 28-396 (447)
330 PRK13360 omega amino acid--pyr 99.5 1.4E-11 3E-16 124.2 27.5 312 93-428 44-407 (442)
331 PRK15400 lysine decarboxylase 99.5 2.3E-12 4.9E-17 133.9 21.9 144 154-305 210-370 (714)
332 PRK06943 adenosylmethionine--8 99.5 2.4E-11 5.3E-16 122.8 28.9 314 92-428 51-413 (453)
333 PRK09221 beta alanine--pyruvat 99.5 2.3E-11 4.9E-16 122.9 28.2 312 93-428 47-410 (445)
334 PRK07036 hypothetical protein; 99.5 1.9E-11 4.2E-16 124.0 27.5 319 92-428 48-419 (466)
335 PRK07481 hypothetical protein; 99.5 2.5E-11 5.3E-16 122.8 28.0 319 93-428 40-412 (449)
336 TIGR00508 bioA adenosylmethion 99.5 1.6E-11 3.5E-16 123.4 26.4 307 93-428 43-393 (427)
337 PRK07480 putative aminotransfe 99.5 1.5E-11 3.3E-16 124.4 26.1 249 92-349 47-339 (456)
338 TIGR03799 NOD_PanD_pyr putativ 99.5 1.2E-11 2.6E-16 126.4 25.2 265 117-395 110-436 (522)
339 PRK05367 glycine dehydrogenase 99.5 1.1E-11 2.3E-16 134.3 26.0 316 82-427 482-837 (954)
340 PRK07483 hypothetical protein; 99.5 4E-11 8.7E-16 121.0 27.3 318 93-428 28-396 (443)
341 PRK08742 adenosylmethionine--8 99.5 3.8E-11 8.3E-16 121.7 26.9 324 92-428 61-434 (472)
342 PRK06209 glutamate-1-semialdeh 99.5 8.5E-12 1.8E-16 125.6 21.8 233 92-349 45-305 (431)
343 PRK15399 lysine decarboxylase 99.5 2E-11 4.3E-16 126.9 24.8 153 154-316 210-380 (713)
344 PRK06916 adenosylmethionine--8 99.5 4.3E-11 9.3E-16 121.3 26.6 318 92-428 53-422 (460)
345 PRK06938 diaminobutyrate--2-ox 99.5 5.6E-11 1.2E-15 120.5 27.3 249 92-349 60-345 (464)
346 PRK07030 adenosylmethionine--8 99.4 4.9E-11 1.1E-15 120.9 26.7 318 93-428 45-413 (466)
347 PRK06149 hypothetical protein; 99.4 6.4E-11 1.4E-15 130.3 29.4 315 93-428 583-934 (972)
348 PRK12566 glycine dehydrogenase 99.4 6.7E-11 1.5E-15 125.5 27.7 275 126-427 530-838 (954)
349 KOG1357 Serine palmitoyltransf 99.4 8.8E-12 1.9E-16 119.3 18.6 237 132-389 178-434 (519)
350 PRK06148 hypothetical protein; 99.4 7.9E-11 1.7E-15 129.7 28.6 314 93-428 622-974 (1013)
351 COG1982 LdcC Arginine/lysine/o 99.4 3.8E-11 8.2E-16 120.2 23.3 235 135-386 73-320 (557)
352 PF00282 Pyridoxal_deC: Pyrido 99.4 2.3E-11 5.1E-16 119.8 21.2 273 111-395 54-371 (373)
353 TIGR01366 serC_3 phosphoserine 99.4 3.6E-11 7.9E-16 118.3 22.4 278 108-428 13-322 (361)
354 PLN02994 1-aminocyclopropane-1 99.4 8.3E-13 1.8E-17 112.8 7.6 90 97-191 59-153 (153)
355 PF00202 Aminotran_3: Aminotra 99.4 1.1E-11 2.5E-16 120.8 16.7 240 93-349 14-292 (339)
356 PRK06931 diaminobutyrate--2-ox 99.4 3.2E-10 7E-15 114.9 27.6 249 92-349 55-339 (459)
357 PRK08297 L-lysine aminotransfe 99.4 2.5E-10 5.4E-15 115.2 25.3 310 93-428 43-407 (443)
358 PLN02452 phosphoserine transam 99.4 2.2E-10 4.7E-15 112.4 24.1 290 96-427 7-326 (365)
359 PF06838 Met_gamma_lyase: Meth 99.4 1.5E-10 3.3E-15 109.0 21.4 177 136-327 54-248 (403)
360 TIGR01365 serC_2 phosphoserine 99.3 1.4E-10 3E-15 113.8 21.2 279 113-428 19-335 (374)
361 KOG1401 Acetylornithine aminot 99.3 5.8E-10 1.3E-14 106.1 22.8 274 93-379 54-353 (433)
362 PLN02414 glycine dehydrogenase 99.3 7.5E-10 1.6E-14 119.7 26.0 299 82-428 89-435 (993)
363 TIGR00699 GABAtrns_euk 4-amino 99.3 3.1E-10 6.7E-15 114.4 21.4 306 92-428 55-432 (464)
364 PRK05367 glycine dehydrogenase 99.3 9.7E-10 2.1E-14 119.2 26.3 302 82-428 62-408 (954)
365 TIGR03251 LAT_fam L-lysine 6-t 99.3 8.2E-10 1.8E-14 111.3 23.9 311 93-428 36-400 (431)
366 COG3033 TnaA Tryptophanase [Am 99.3 5.9E-10 1.3E-14 104.1 20.7 322 85-428 27-392 (471)
367 KOG1358 Serine palmitoyltransf 99.3 2E-10 4.3E-15 108.3 17.0 304 93-428 92-421 (467)
368 PLN02974 adenosylmethionine-8- 99.2 3.8E-09 8.3E-14 112.8 26.8 319 96-428 366-785 (817)
369 COG1921 SelA Selenocysteine sy 99.2 4.7E-09 1E-13 101.0 24.6 230 98-349 30-268 (395)
370 COG0161 BioA Adenosylmethionin 99.2 5E-09 1.1E-13 103.1 25.2 318 93-428 42-410 (449)
371 COG3844 Kynureninase [Amino ac 99.2 3.8E-09 8.2E-14 97.7 22.4 295 93-428 28-367 (407)
372 PRK12462 phosphoserine aminotr 99.2 5.4E-09 1.2E-13 101.7 24.0 288 97-427 5-325 (364)
373 KOG1404 Alanine-glyoxylate ami 99.2 5.6E-09 1.2E-13 98.8 21.8 268 92-378 47-352 (442)
374 TIGR03811 tyr_de_CO2_Ent tyros 99.1 4.8E-08 1E-12 101.1 26.4 277 109-394 95-500 (608)
375 KOG1402 Ornithine aminotransfe 99.1 1E-08 2.2E-13 94.9 18.9 302 93-427 57-392 (427)
376 TIGR00461 gcvP glycine dehydro 99.0 8E-08 1.7E-12 103.0 25.8 298 82-428 50-397 (939)
377 KOG1383 Glutamate decarboxylas 99.0 4.5E-08 9.8E-13 94.8 20.6 308 93-427 77-409 (491)
378 PF03841 SelA: L-seryl-tRNA se 99.0 5.4E-10 1.2E-14 106.5 6.8 266 98-378 9-296 (367)
379 PF02347 GDC-P: Glycine cleava 99.0 2E-08 4.3E-13 98.9 17.6 272 82-383 51-369 (429)
380 COG4100 Cystathionine beta-lya 98.9 1.4E-07 3.1E-12 86.4 19.4 184 126-325 58-257 (416)
381 COG1003 GcvP Glycine cleavage 98.9 4.6E-07 9.9E-12 87.2 21.9 314 82-426 49-406 (496)
382 COG0403 GcvP Glycine cleavage 98.8 1.6E-06 3.5E-11 83.6 24.0 281 83-394 62-393 (450)
383 KOG2467 Glycine/serine hydroxy 98.8 1.7E-06 3.7E-11 81.5 23.1 301 97-429 42-380 (477)
384 KOG1403 Predicted alanine-glyo 98.7 7.2E-07 1.6E-11 81.8 16.1 299 110-429 63-402 (452)
385 PRK12566 glycine dehydrogenase 98.5 4.1E-05 8.8E-10 82.3 24.1 299 82-427 65-409 (954)
386 KOG0629 Glutamate decarboxylas 98.4 5E-05 1.1E-09 73.2 19.4 267 123-398 128-436 (510)
387 PF05889 SLA_LP_auto_ag: Solub 98.0 0.00026 5.7E-09 68.6 16.7 272 136-426 56-339 (389)
388 PLN02672 methionine S-methyltr 97.8 0.00099 2.2E-08 73.3 17.3 232 97-342 389-641 (1082)
389 COG1932 SerC Phosphoserine ami 97.7 0.0048 1E-07 59.0 18.9 291 97-425 6-325 (365)
390 KOG1405 4-aminobutyrate aminot 97.7 0.0015 3.3E-08 61.7 14.3 161 217-398 254-431 (484)
391 KOG0628 Aromatic-L-amino-acid/ 97.6 0.00075 1.6E-08 66.0 12.1 142 130-276 107-279 (511)
392 KOG3846 L-kynurenine hydrolase 97.4 0.017 3.7E-07 53.8 17.5 212 92-319 63-293 (465)
393 KOG3843 Predicted serine hydro 96.8 0.0045 9.8E-08 56.4 7.6 202 139-349 60-270 (432)
394 KOG2040 Glycine dehydrogenase 96.6 0.16 3.4E-06 52.2 17.4 293 82-423 104-445 (1001)
395 KOG2040 Glycine dehydrogenase 96.4 0.34 7.4E-06 49.9 18.5 169 132-322 578-767 (1001)
396 KOG2790 Phosphoserine aminotra 88.6 19 0.00041 33.9 13.7 278 95-397 6-313 (370)
397 COG2102 Predicted ATPases of P 87.1 5.5 0.00012 35.9 9.2 99 157-266 3-116 (223)
398 PLN02591 tryptophan synthase 78.7 56 0.0012 30.4 18.0 167 84-267 19-194 (250)
399 TIGR01470 cysG_Nterm siroheme 75.9 27 0.00059 31.3 9.7 96 153-270 7-103 (205)
400 PF00290 Trp_syntA: Tryptophan 74.4 76 0.0016 29.7 14.8 166 84-266 27-202 (259)
401 PF05368 NmrA: NmrA-like famil 73.9 20 0.00044 32.5 8.6 96 158-266 1-98 (233)
402 KOG1201 Hydroxysteroid 17-beta 73.2 22 0.00048 33.7 8.5 101 153-256 36-144 (300)
403 PRK13111 trpA tryptophan synth 71.7 88 0.0019 29.2 16.6 167 84-266 29-204 (258)
404 PF02662 FlpD: Methyl-viologen 69.4 16 0.00035 29.9 6.1 56 201-260 29-89 (124)
405 TIGR00290 MJ0570_dom MJ0570-re 68.0 58 0.0013 29.7 9.9 98 158-266 4-115 (223)
406 PRK08265 short chain dehydroge 67.3 58 0.0012 30.0 10.3 96 155-255 6-108 (261)
407 PRK05678 succinyl-CoA syntheta 66.7 18 0.00039 34.4 6.7 72 184-268 49-122 (291)
408 COG0159 TrpA Tryptophan syntha 65.6 1.2E+02 0.0026 28.4 17.5 167 84-266 34-209 (265)
409 TIGR03573 WbuX N-acetyl sugar 65.0 81 0.0018 30.8 11.1 109 155-278 60-176 (343)
410 TIGR00289 conserved hypothetic 63.2 65 0.0014 29.3 9.3 98 158-266 4-115 (222)
411 TIGR00262 trpA tryptophan synt 63.1 1.3E+02 0.0028 28.0 17.3 168 85-267 28-203 (256)
412 TIGR01019 sucCoAalpha succinyl 62.2 24 0.00052 33.5 6.5 74 184-270 47-122 (286)
413 CHL00200 trpA tryptophan synth 61.7 1.4E+02 0.0031 27.9 18.0 167 84-267 32-207 (263)
414 PF13460 NAD_binding_10: NADH( 60.9 41 0.00089 28.9 7.6 88 158-260 1-88 (183)
415 cd03313 enolase Enolase: Enola 60.8 57 0.0012 32.7 9.3 154 99-266 196-360 (408)
416 cd06568 GH20_SpHex_like A subg 60.6 19 0.00042 34.9 5.8 69 194-267 25-93 (329)
417 cd01563 Thr-synth_1 Threonine 60.2 1.1E+02 0.0024 29.4 11.0 53 155-208 70-124 (324)
418 COG1091 RfbD dTDP-4-dehydrorha 60.1 73 0.0016 30.2 9.3 106 216-326 37-164 (281)
419 PRK06194 hypothetical protein; 57.0 1.1E+02 0.0023 28.5 10.3 78 156-238 7-93 (287)
420 PF01902 ATP_bind_4: ATP-bindi 56.8 79 0.0017 28.7 8.7 98 158-266 4-115 (218)
421 cd00640 Trp-synth-beta_II Tryp 55.9 1.1E+02 0.0025 27.8 10.0 52 156-208 51-104 (244)
422 cd02742 GH20_hexosaminidase Be 55.4 23 0.0005 33.9 5.3 68 194-267 23-90 (303)
423 PRK06352 threonine synthase; V 53.9 1.2E+02 0.0026 29.7 10.1 105 97-208 21-130 (351)
424 COG1105 FruK Fructose-1-phosph 53.7 1.2E+02 0.0027 29.1 9.7 58 214-274 109-171 (310)
425 TIGR01137 cysta_beta cystathio 52.8 2.1E+02 0.0046 28.9 12.2 76 132-208 38-116 (454)
426 cd06570 GH20_chitobiase-like_1 52.6 29 0.00063 33.4 5.5 62 194-267 25-86 (311)
427 PRK07063 short chain dehydroge 51.9 1.5E+02 0.0032 27.1 10.1 97 154-255 6-115 (260)
428 PRK06483 dihydromonapterin red 51.4 1.6E+02 0.0035 26.3 10.2 52 157-208 4-55 (236)
429 PLN00125 Succinyl-CoA ligase [ 50.3 1.8E+02 0.004 27.8 10.4 76 183-271 52-130 (300)
430 PRK08197 threonine synthase; V 50.3 2E+02 0.0044 28.6 11.3 106 97-208 72-181 (394)
431 PRK06463 fabG 3-ketoacyl-(acyl 50.0 1.7E+02 0.0037 26.6 10.2 31 155-185 7-37 (255)
432 COG0031 CysK Cysteine synthase 49.9 1.8E+02 0.004 27.8 10.2 86 153-240 59-148 (300)
433 PRK12936 3-ketoacyl-(acyl-carr 49.7 1.6E+02 0.0034 26.4 9.9 77 156-237 7-89 (245)
434 cd06448 L-Ser-dehyd Serine deh 49.2 2.5E+02 0.0054 27.0 12.8 83 156-243 52-137 (316)
435 cd01561 CBS_like CBS_like: Thi 48.8 81 0.0018 29.8 7.9 54 156-209 54-108 (291)
436 PRK13125 trpA tryptophan synth 48.8 2.2E+02 0.0047 26.2 15.9 148 86-257 23-180 (244)
437 PRK06721 threonine synthase; R 48.1 2.8E+02 0.006 27.1 12.2 71 132-207 55-129 (352)
438 COG1648 CysG Siroheme synthase 47.8 2.1E+02 0.0046 25.8 15.9 95 153-270 10-106 (210)
439 PRK08329 threonine synthase; V 47.8 2.5E+02 0.0054 27.4 11.3 73 132-208 84-158 (347)
440 PRK08339 short chain dehydroge 47.8 1.6E+02 0.0034 27.2 9.6 34 154-187 7-40 (263)
441 PRK05638 threonine synthase; V 47.6 3E+02 0.0064 27.9 12.2 72 132-207 92-165 (442)
442 PRK12481 2-deoxy-D-gluconate 3 47.5 1.4E+02 0.0031 27.2 9.2 67 155-226 8-75 (251)
443 PRK04210 phosphoenolpyruvate c 47.4 1.8E+02 0.0039 30.4 10.2 107 134-246 10-134 (601)
444 PRK05867 short chain dehydroge 47.4 1.8E+02 0.004 26.3 9.9 67 154-225 8-77 (253)
445 cd06562 GH20_HexA_HexB-like Be 47.2 29 0.00062 34.0 4.6 64 194-267 25-88 (348)
446 PRK07424 bifunctional sterol d 47.1 1.7E+02 0.0038 29.3 10.2 95 154-255 177-271 (406)
447 PRK05876 short chain dehydroge 47.0 1.7E+02 0.0036 27.3 9.7 66 155-225 6-74 (275)
448 PRK05872 short chain dehydroge 46.9 1.7E+02 0.0037 27.5 9.9 96 154-254 8-113 (296)
449 PLN00191 enolase 46.8 62 0.0013 33.0 7.0 97 163-267 296-393 (457)
450 PRK06260 threonine synthase; V 46.5 2.3E+02 0.0049 28.3 11.0 52 156-208 116-170 (397)
451 KOG1465 Translation initiation 46.4 1.8E+02 0.004 27.7 9.3 106 153-269 160-271 (353)
452 COG0373 HemA Glutamyl-tRNA red 45.8 3.3E+02 0.0071 27.4 11.8 67 137-206 161-229 (414)
453 COG1184 GCD2 Translation initi 45.8 2.8E+02 0.006 26.6 10.7 102 153-266 117-225 (301)
454 COG2240 PdxK Pyridoxal/pyridox 45.7 1.7E+02 0.0038 27.6 9.2 38 228-272 73-114 (281)
455 TIGR00649 MG423 conserved hypo 45.7 1.5E+02 0.0032 29.8 9.6 93 156-260 287-399 (422)
456 PRK06139 short chain dehydroge 45.5 1.6E+02 0.0034 28.5 9.5 97 154-255 6-113 (330)
457 PLN00011 cysteine synthase 45.2 2.6E+02 0.0057 26.9 10.9 53 156-208 70-123 (323)
458 PRK08246 threonine dehydratase 44.8 2.6E+02 0.0055 26.8 10.7 73 132-208 49-122 (310)
459 KOG2741 Dimeric dihydrodiol de 44.7 69 0.0015 31.1 6.5 75 187-273 59-133 (351)
460 PRK04296 thymidine kinase; Pro 44.7 84 0.0018 27.6 6.8 91 164-268 16-112 (190)
461 PF00106 adh_short: short chai 44.5 97 0.0021 25.9 7.1 95 157-256 2-110 (167)
462 PF10087 DUF2325: Uncharacteri 44.5 1.4E+02 0.0031 22.9 8.6 70 188-267 11-80 (97)
463 PRK08278 short chain dehydroge 44.2 2.4E+02 0.0053 26.0 10.4 76 156-236 7-98 (273)
464 COG0505 CarA Carbamoylphosphat 44.0 71 0.0015 31.1 6.4 71 177-259 177-249 (368)
465 TIGR03679 arCOG00187 arCOG0018 43.8 1.8E+02 0.004 26.2 9.0 97 159-266 2-116 (218)
466 PRK05717 oxidoreductase; Valid 43.4 2.3E+02 0.005 25.7 10.0 56 154-209 9-64 (255)
467 TIGR02717 AcCoA-syn-alpha acet 43.3 99 0.0021 31.4 7.9 57 217-275 77-134 (447)
468 PRK13028 tryptophan synthase s 43.3 3.3E+02 0.0072 27.3 11.4 73 132-208 90-168 (402)
469 PRK06500 short chain dehydroge 43.0 2.5E+02 0.0054 25.2 10.2 54 156-209 7-60 (249)
470 COG0352 ThiE Thiamine monophos 42.9 1E+02 0.0022 27.8 7.1 99 218-326 24-122 (211)
471 PRK07231 fabG 3-ketoacyl-(acyl 42.8 2.2E+02 0.0047 25.6 9.6 80 154-238 4-91 (251)
472 PRK07067 sorbitol dehydrogenas 42.7 2.1E+02 0.0045 26.0 9.6 76 156-236 7-88 (257)
473 PRK08589 short chain dehydroge 42.6 2.3E+02 0.0049 26.2 9.9 54 155-209 6-62 (272)
474 PRK05884 short chain dehydroge 42.0 1.2E+02 0.0027 27.1 7.8 69 158-233 3-74 (223)
475 PRK06841 short chain dehydroge 41.8 2.5E+02 0.0054 25.4 9.9 78 154-236 14-97 (255)
476 PRK07791 short chain dehydroge 41.4 2.7E+02 0.0059 26.0 10.3 32 155-186 6-37 (286)
477 PRK07523 gluconate 5-dehydroge 41.3 2.5E+02 0.0055 25.4 9.9 68 154-226 9-79 (255)
478 PRK08638 threonine dehydratase 41.2 1.3E+02 0.0027 29.3 8.0 52 156-207 76-128 (333)
479 cd01994 Alpha_ANH_like_IV This 41.2 1.7E+02 0.0037 25.9 8.3 98 158-266 3-118 (194)
480 PRK07097 gluconate 5-dehydroge 41.0 2.6E+02 0.0056 25.6 9.9 97 154-255 9-116 (265)
481 KOG1252 Cystathionine beta-syn 40.9 2.2E+02 0.0047 27.7 9.1 47 162-209 111-159 (362)
482 PF02571 CbiJ: Precorrin-6x re 40.4 1.5E+02 0.0032 27.6 7.9 93 157-266 2-97 (249)
483 PRK08277 D-mannonate oxidoredu 40.3 2.8E+02 0.0062 25.5 10.2 56 154-209 9-67 (278)
484 PRK07792 fabG 3-ketoacyl-(acyl 39.9 3.3E+02 0.0072 25.7 11.0 97 154-255 11-118 (306)
485 PRK07478 short chain dehydroge 39.5 2.3E+02 0.005 25.7 9.3 95 156-255 7-113 (254)
486 PLN02556 cysteine synthase/L-3 39.5 2.9E+02 0.0062 27.3 10.3 107 132-242 86-197 (368)
487 PRK06128 oxidoreductase; Provi 39.4 3E+02 0.0066 25.8 10.3 97 155-256 55-165 (300)
488 cd01562 Thr-dehyd Threonine de 39.3 1.9E+02 0.0042 27.3 9.0 52 156-208 66-119 (304)
489 PRK07825 short chain dehydroge 39.0 2.4E+02 0.0051 26.0 9.4 31 156-186 6-36 (273)
490 PRK06935 2-deoxy-D-gluconate 3 39.0 2.8E+02 0.006 25.2 9.8 76 154-235 14-98 (258)
491 PF04748 Polysacc_deac_2: Dive 38.9 2.4E+02 0.0052 25.5 8.9 119 135-266 74-206 (213)
492 cd00532 MGS-like MGS-like doma 38.6 2E+02 0.0043 22.8 10.9 93 164-269 10-106 (112)
493 TIGR01832 kduD 2-deoxy-D-gluco 38.5 2.8E+02 0.0061 24.9 9.7 67 154-225 4-71 (248)
494 cd01075 NAD_bind_Leu_Phe_Val_D 38.2 2.3E+02 0.0051 25.1 8.7 104 150-268 23-138 (200)
495 PRK12367 short chain dehydroge 38.2 3.2E+02 0.0068 25.0 10.2 92 156-256 15-106 (245)
496 cd06569 GH20_Sm-chitobiase-lik 38.1 61 0.0013 32.9 5.4 73 194-267 29-115 (445)
497 PLN03013 cysteine synthase 38.0 3.5E+02 0.0075 27.4 10.6 77 130-208 148-229 (429)
498 PRK07109 short chain dehydroge 37.2 2.4E+02 0.0052 27.2 9.4 66 155-225 8-76 (334)
499 PRK06182 short chain dehydroge 37.1 2.8E+02 0.006 25.5 9.5 79 156-242 4-88 (273)
500 PRK08535 translation initiatio 37.1 3.6E+02 0.0077 25.9 10.3 117 135-267 104-227 (310)
No 1
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-63 Score=489.31 Aligned_cols=341 Identities=43% Similarity=0.714 Sum_probs=308.0
Q ss_pred cCCchhHHHHHHHHHHHhcC--CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCC
Q 014172 75 VKPSKTVAITDQATALAQAG--VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLS 152 (429)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~g--~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~ 152 (429)
..++....+...+.+..+.. .++|+|++|+|++++|+.+.+++.+++.++...|++..|.++||++|++++.+.+|+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~ 85 (393)
T COG0436 6 VLPSYTFAVLAEAKAAAELKGKEDVIDLSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLD 85 (393)
T ss_pred cCcchhHHHHhHHHHHHHhcCCCCEEEeCCCCCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 34444445555333333332 4699999999999999999999999988754378899999999999999999999998
Q ss_pred CCCCc-EEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCC-CCCCCCHHHHHhhcccCCc
Q 014172 153 YTPDQ-ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRIS-ENFLLDPKVLESKLTEKSR 230 (429)
Q Consensus 153 ~~~~~-i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~e~l~~~l~~~~~ 230 (429)
+++++ |++|+|+++++.+++.++++|||+|++++|.|+.|...++.+|++++.++++.+ ++|.+|+++|++++++++|
T Consensus 86 ~~~~~eiivt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk 165 (393)
T COG0436 86 VDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTK 165 (393)
T ss_pred CCCCCeEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccce
Confidence 88876 999999999999999999999999999999999999999999999999998665 4899999999999999999
Q ss_pred EEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccce
Q 014172 231 LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWR 310 (429)
Q Consensus 231 ~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R 310 (429)
+|++++||||||++++++++++|+++|++| |++||+||+|.++.|++..+.++.++....+++|+++||||.|+|+|||
T Consensus 166 ~i~ln~P~NPTGav~~~~~l~~i~~~a~~~-~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwR 244 (393)
T COG0436 166 AIILNSPNNPTGAVYSKEELKAIVELAREH-DIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWR 244 (393)
T ss_pred EEEEeCCCCCcCcCCCHHHHHHHHHHHHHc-CeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccc
Confidence 999999999999999999999999999999 9999999999999999876778888776578999999999999999999
Q ss_pred eeEEEcC-HHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeec-CCc
Q 014172 311 LGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-PQG 388 (429)
Q Consensus 311 ~G~v~~~-~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~-p~~ 388 (429)
+||++++ +++++.+.+++....+|++.++|.++.++|+.... ..+++.+++.|++||+.+.+.|.+++|+.+.. |+|
T Consensus 245 vG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~-~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~G 323 (393)
T COG0436 245 IGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQS-DEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEG 323 (393)
T ss_pred eeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccc-hHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCe
Confidence 9999999 88999999999999999999999999999997322 45788888999999999999999998899988 899
Q ss_pred eEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 389 AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 389 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+||+|++++.. .++.+|+.+|++++||+|
T Consensus 324 a~Y~~~~i~~~-----------~d~~~f~~~Ll~~~gV~v 352 (393)
T COG0436 324 AFYLFPKIPEL-----------LDSEEFAKKLLEEAGVAV 352 (393)
T ss_pred eEEEEeecCCC-----------CCHHHHHHHHHHhCCEEE
Confidence 99999999864 389999999999999987
No 2
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=5.7e-59 Score=437.35 Aligned_cols=354 Identities=38% Similarity=0.639 Sum_probs=312.9
Q ss_pred CcccccccCCchhHHHHHHHHHHHhcCCCeEE-cCCCCCCCCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHH
Q 014172 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIR-LAAGEPDFDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKL 145 (429)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~-L~~g~~~~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l 145 (429)
.+.++...+++.+.++..++.+.. ..+ |+.|.|++++|+.+.+++.+++... .++|++..|.++|+++|++.+
T Consensus 8 ~~~~l~~~~~~vw~e~~~la~e~~-----~~~~LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~ 82 (420)
T KOG0257|consen 8 RNRNLSTSKPYVWTEINRLAAEHK-----VPNPLGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAY 82 (420)
T ss_pred ccccccccCCcHHHHHHHHHHhcC-----CCCcccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHH
Confidence 355666667777777766665432 233 9999999999999999999998774 789999999999999999999
Q ss_pred HhhcCCCCCC-CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCC------CCCCCCCCH
Q 014172 146 KEENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR------ISENFLLDP 218 (429)
Q Consensus 146 ~~~~g~~~~~-~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~------~~~~~~~d~ 218 (429)
+..+|....+ ++|+||.|+.++|..++++++++||+|++.+|+|..|....+++|++++.+++. ..++|.+|.
T Consensus 83 se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~ 162 (420)
T KOG0257|consen 83 SEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDP 162 (420)
T ss_pred HHHhccccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCCh
Confidence 9988877666 579999999999999999999999999999999999999999999999999998 456799999
Q ss_pred HHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEe
Q 014172 219 KVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVN 298 (429)
Q Consensus 219 e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~ 298 (429)
++++.+++++||+|++|+||||||.++++++|++|+++|++| |++||+||+|..++|++..+..+.+++++++++|.++
T Consensus 163 ~~le~~~t~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~-~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvg 241 (420)
T KOG0257|consen 163 EELESKITEKTKAIILNTPHNPTGKVFSREELERIAELCKKH-GLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVG 241 (420)
T ss_pred HHHHhhccCCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHC-CEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEec
Confidence 999999999999999999999999999999999999999999 9999999999999999998999999999999999999
Q ss_pred ccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCC-----hHHHHHHHHHHHHHHHHHHH
Q 014172 299 GFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAG-----GEVVSKMVKAFRERRDFLVK 373 (429)
Q Consensus 299 S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~-----~~~~~~~~~~~~~~r~~l~~ 373 (429)
||||+||++|||+||+++++.++..+..+........+++.|.|..+++..+..+ ..++.++.+.|+++|+.+.+
T Consensus 242 S~gKtf~~TGWrlGW~igp~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k 321 (420)
T KOG0257|consen 242 SFGKTFGVTGWRLGWAIGPKHLYSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAK 321 (420)
T ss_pred cccceeeeeeeeeeeeechHHhhhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988864310 14566699999999999999
Q ss_pred HhccCCCceeecCCceEEEEEecCCc-cCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 374 SFGELEGVKMSEPQGAFYLFIDFSTY-YGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 374 ~L~~l~g~~~~~p~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.|+++ |+++..|+|++|+|++++.. ..+..++.....++..++..|+++.||++
T Consensus 322 ~L~~l-g~~v~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~ 376 (420)
T KOG0257|consen 322 ALEEL-GLKVTGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVV 376 (420)
T ss_pred HHHhc-CCccccCCCceEEEEeccccccCCcchhhccCCCceeeehhhhccCcEEE
Confidence 99999 99999999999999999821 11222333333467789999999999874
No 3
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=1.5e-54 Score=431.46 Aligned_cols=347 Identities=21% Similarity=0.366 Sum_probs=302.6
Q ss_pred CcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHH
Q 014172 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLK 146 (429)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~ 146 (429)
+++++..++.+.+..+....+..+..|.++|+|+.|+|++++|+.+.+++.+.+... ..+|++..|.++||++|++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~ 82 (388)
T PRK07366 3 FAQRLQPLQSNVFADMDRAKAQARAAGKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYE 82 (388)
T ss_pred hhhhhhcCCccHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHH
Confidence 567777777777767767777777788899999999999999999999999887543 4679888999999999999999
Q ss_pred hhcCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhc
Q 014172 147 EENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL 225 (429)
Q Consensus 147 ~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l 225 (429)
+.+|+.++++ +|++|+|+++++.+++++++++||+|++++|+|+.|...++..|++++.+|++.++++.+|++++++.+
T Consensus 83 ~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~ 162 (388)
T PRK07366 83 QRFGLAVDPETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEV 162 (388)
T ss_pred HhhCCcCCCcCeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhh
Confidence 9999888998 799999999999999999999999999999999999999999999999999987777889999998888
Q ss_pred ccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCC-CCccccCCCCCCceEEEeccChhc
Q 014172 226 TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT-HTSFASLPGMWERTLTVNGFSKAF 304 (429)
Q Consensus 226 ~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~ 304 (429)
.+++|++++++||||||.+++.+++++|+++|++| +++||+||+|.++.|++.. .+++.+++...+++|+++||||.|
T Consensus 163 ~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~-~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~ 241 (388)
T PRK07366 163 LAQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQH-DLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSY 241 (388)
T ss_pred cccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHc-CeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeeccccc
Confidence 77899999999999999999999999999999999 9999999999999987643 455666655456789999999999
Q ss_pred ccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceee
Q 014172 305 AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (429)
Q Consensus 305 ~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~ 384 (429)
|++|+|+||+++++++++.+.+.......+.....+.++.+++.. .++++++.++.|+++|+.+.+.|+++ |+.+.
T Consensus 242 g~~GlRiG~~v~~~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~---~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~~~ 317 (388)
T PRK07366 242 NMGGFRIGFAIGNAQLIQALRQVKAVVDFNQYRGILNGAIAALTG---PQATVQQTVQIFRQRRDAFINALHQI-GWPVP 317 (388)
T ss_pred CCcchhheehcCCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc
Confidence 999999999999999999999887766666545555666666654 37899999999999999999999988 88878
Q ss_pred cCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 385 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 385 ~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.|++|+|+|++++..+. .++.+++++|++++||.|
T Consensus 318 ~p~~g~f~~~~~~~~~~---------~~~~~~~~~l~~~~gv~v 352 (388)
T PRK07366 318 LPEATMYVWAKLPEPWQ---------GNSVEFCTQLVAQTGVAA 352 (388)
T ss_pred CCCeeEEEEEECCcccC---------CCHHHHHHHHHHhCCEEE
Confidence 89999999999985311 247889999988889976
No 4
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6e-54 Score=428.50 Aligned_cols=345 Identities=25% Similarity=0.453 Sum_probs=307.4
Q ss_pred cCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHH
Q 014172 67 SLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKL 145 (429)
Q Consensus 67 ~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l 145 (429)
++++++..+.++.+.++...+.+.+..+.++|+|+.|+|++++|+.+.+++.+.+... ...|. ..|..+||++|++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~ 82 (399)
T PRK07681 4 TLATRMKAFQSSIFSELGAYKKEKIAAGHKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYY 82 (399)
T ss_pred cHhHHHhhcCccHHHHHHHHHHHhhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHH
Confidence 4577888788888888777777766677889999999999988999999998877542 34453 579999999999999
Q ss_pred HhhcCCCCCC-CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhh
Q 014172 146 KEENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESK 224 (429)
Q Consensus 146 ~~~~g~~~~~-~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~ 224 (429)
.+.+|+.+++ ++|++|+|+++++.+++.+++++||+|++++|+|+.|...++..|++++.+|++++++|.+|++.+++.
T Consensus 83 ~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~ 162 (399)
T PRK07681 83 NNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEE 162 (399)
T ss_pred HHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHh
Confidence 9999998998 899999999999999999999999999999999999999999999999999998777788999999999
Q ss_pred cccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhc
Q 014172 225 LTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF 304 (429)
Q Consensus 225 l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 304 (429)
+.+++++|++++||||||.+++.+++++|+++|++| +++||+||+|.++.|++....++.+++...+++|+++||||.|
T Consensus 163 ~~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 241 (399)
T PRK07681 163 IADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKH-NIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSY 241 (399)
T ss_pred ccccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHc-CeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeeccccc
Confidence 888899999999999999999999999999999999 9999999999999987655556666655567899999999999
Q ss_pred ccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceee
Q 014172 305 AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (429)
Q Consensus 305 ~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~ 384 (429)
|++|+|+||+++++++++.+.........+++.+.|.++..+|.. ..+++++.++.|+++++.+.+.|+++ |+++.
T Consensus 242 ~~~GlRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 317 (399)
T PRK07681 242 SLAGSRIGYMIGNEEIVRALTQFKSNTDYGVFLPIQKAACAALRN---GAAFCEKNRGIYQERRDTLVDGFRTF-GWNVD 317 (399)
T ss_pred CCccceeEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc
Confidence 999999999999999999998887766678999999999999987 45789999999999999999999998 88888
Q ss_pred cCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 385 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 385 ~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.|++|+|+|++++.. .++.+++.+|++++||.|
T Consensus 318 ~p~~g~f~~~~l~~~-----------~~~~~~~~~l~~~~gv~v 350 (399)
T PRK07681 318 KPAGSMFVWAEIPKG-----------WTSLSFAYALMDRANVVV 350 (399)
T ss_pred CCCeeeEEEEECCCC-----------CCHHHHHHHHHHhCCEEE
Confidence 899999999999753 367899999999789976
No 5
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=8e-54 Score=428.42 Aligned_cols=341 Identities=31% Similarity=0.610 Sum_probs=304.6
Q ss_pred cCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHH
Q 014172 67 SLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLK 146 (429)
Q Consensus 67 ~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~ 146 (429)
.+++++..+..+.+..+.+.+. +.++|+|+.|.|++++|+.+.+++.+.+.++..+|++..|.++||+++++++.
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~ 105 (413)
T PLN00175 31 QVAKRLEKFKTTIFTQMSSLAI-----KHGAINLGQGFPNFDGPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFK 105 (413)
T ss_pred chhHHhhcCCCCHHHHHHHHhh-----cCCeEecCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHH
Confidence 4678888888887766655442 24699999999999999999999999887666789999999999999999999
Q ss_pred hhcCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhc
Q 014172 147 EENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL 225 (429)
Q Consensus 147 ~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l 225 (429)
+.+|++++++ +|++|+|+++++.+++.+++++||+|++++|+|+.|...++..|++++.+++++++ +.+|++.|++.+
T Consensus 106 ~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~~~~l~~~~ 184 (413)
T PLN00175 106 KDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPD-FAVPEDELKAAF 184 (413)
T ss_pred HHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCccc-CCCCHHHHHHhc
Confidence 9999888887 79999999999999999999999999999999999999999999999999987544 789999999999
Q ss_pred ccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcc
Q 014172 226 TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 305 (429)
Q Consensus 226 ~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 305 (429)
.+++|+|++++||||||.+++.+++++|+++|++| +++||+||+|.++.|++ .+.++.++++..+++|+++||||.|+
T Consensus 185 ~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~-~~~ii~De~Y~~l~~~~-~~~s~~~~~~~~~~vi~i~SfSK~~~ 262 (413)
T PLN00175 185 TSKTRAILINTPHNPTGKMFTREELELIASLCKEN-DVLAFTDEVYDKLAFEG-DHISMASLPGMYERTVTMNSLGKTFS 262 (413)
T ss_pred CcCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHc-CcEEEEecccCccccCC-cccChhhCCCCcCcEEEEecchhhcc
Confidence 88999999999999999999999999999999999 99999999999999865 34466666665689999999999999
Q ss_pred cccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeec
Q 014172 306 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 385 (429)
Q Consensus 306 ~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~ 385 (429)
++|||+||+++++++++.+.........+++.+.|.++..+|+. .+.++++.++.|+++|+.+.+.|++. |+++..
T Consensus 263 ~~G~RiG~~v~~~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 338 (413)
T PLN00175 263 LTGWKIGWAIAPPHLTWGVRQAHSFLTFATATPMQWAAVAALRA---PESYYEELKRDYSAKKDILVEGLKEV-GFKVYP 338 (413)
T ss_pred CcchheeeeEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecC
Confidence 99999999999999999998888777788999999999999986 46789999999999999999999998 899999
Q ss_pred CCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 386 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 386 p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|+||||+|++++.. + ..++.+|+++|++++||.+
T Consensus 339 p~g~~f~~~~~~~~-~--------~~~~~~~~~~ll~~~gV~v 372 (413)
T PLN00175 339 SSGTYFVMVDHTPF-G--------FENDIAFCEYLIEEVGVAA 372 (413)
T ss_pred CCeeEEEEEecccc-C--------CCCHHHHHHHHHHhCCEEE
Confidence 99999999998531 0 1257899999998889975
No 6
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=2.2e-53 Score=423.23 Aligned_cols=346 Identities=26% Similarity=0.431 Sum_probs=305.2
Q ss_pred cCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHH
Q 014172 67 SLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKL 145 (429)
Q Consensus 67 ~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l 145 (429)
.+++++....++.+..+...+.+....++++|+|+.|+|++++++.+.+++.+.+... ..+|+|..|.++||+++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~ 83 (389)
T PRK08068 4 EPSELLKQLPKQFFASLVAKVNKKVAEGHDVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFY 83 (389)
T ss_pred chhhHhhhcCccHHHHHHHHHHHHHhcCCCeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 4667777778887777777777666677789999999999888888999998887643 467988999999999999999
Q ss_pred HhhcCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhh
Q 014172 146 KEENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESK 224 (429)
Q Consensus 146 ~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~ 224 (429)
.+.+|..++++ +|++|+|+++++..++.+++++||+|++++|+|..|...++..|++++.+|++.++++.+|++++++.
T Consensus 84 ~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~ 163 (389)
T PRK08068 84 KREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEE 163 (389)
T ss_pred HHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHh
Confidence 98889888888 89999999999999999999999999999999999999999999999999997666788999999999
Q ss_pred cccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhc
Q 014172 225 LTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF 304 (429)
Q Consensus 225 l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 304 (429)
+.+++++|++++||||||.+++.+++++|+++|++| +++||+||+|.++.|++....++....+..+++++++||||.|
T Consensus 164 ~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~-~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~ 242 (389)
T PRK08068 164 VAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKH-NIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTF 242 (389)
T ss_pred ccccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHc-CeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhcc
Confidence 988899999999999999999999999999999999 9999999999998887544445444444457899999999999
Q ss_pred ccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceee
Q 014172 305 AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (429)
Q Consensus 305 ~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~ 384 (429)
|++|+|+||+++++++++.+.+....+..+.+.+.|.++..++.. ..++++.+++.|+++|+.+.+.|+++ |+.+.
T Consensus 243 g~~GlRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~ 318 (389)
T PRK08068 243 NMAGWRVAFAVGNESVIEAINLLQDHLFVSLFGAIQDAAIEALLS---DQSCVAELVARYESRRNAFISACREI-GWEVD 318 (389)
T ss_pred CCccceeEeEecCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc
Confidence 999999999999999999998887776666777788888888865 46889999999999999999999998 88888
Q ss_pred cCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 385 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 385 ~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+|+||||+|++++.. .++.+++++|++++||.|
T Consensus 319 ~~~g~~~~~v~~~~~-----------~~~~~~~~~l~~~~gi~v 351 (389)
T PRK08068 319 APKGSFFAWMPVPKG-----------YTSEQFADLLLEKAHVAV 351 (389)
T ss_pred CCCeeEEEEEECCCC-----------CCHHHHHHHHHHhCCEEE
Confidence 999999999999853 368899999998889986
No 7
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=4.1e-53 Score=420.80 Aligned_cols=346 Identities=31% Similarity=0.540 Sum_probs=309.2
Q ss_pred cCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHH
Q 014172 67 SLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKL 145 (429)
Q Consensus 67 ~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l 145 (429)
++++++..+.++....+...++++...++++|+|+.|+|++++|+.+.+++.+.+.. ....|++..|.++||+++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~ 82 (385)
T PRK09276 3 KLADRIKNLPPYLFAEIDKKKAEKIARGVDVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWY 82 (385)
T ss_pred chhhHhhhCCccHHHHHHHHHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHH
Confidence 356777788888777777778888778889999999999999899999999988754 3467988889999999999999
Q ss_pred HhhcCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhh
Q 014172 146 KEENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESK 224 (429)
Q Consensus 146 ~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~ 224 (429)
++.+|.+++++ +|++|+|+++++..++..++++||+|++++|+|+.|...++..|++++.++++.++++.+|++++++.
T Consensus 83 ~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~ 162 (385)
T PRK09276 83 KRRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPED 162 (385)
T ss_pred HHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHh
Confidence 98889888887 59999999999999999999999999999999999999999999999999997666788999999998
Q ss_pred cccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhc
Q 014172 225 LTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF 304 (429)
Q Consensus 225 l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 304 (429)
+.+++++|++++||||||.+++.+++++|+++|++| +++||+||+|.++.|++....++..++...+++|+++||||.|
T Consensus 163 ~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 241 (385)
T PRK09276 163 VAKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKY-DIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTY 241 (385)
T ss_pred ccccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHC-CcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhc
Confidence 888899999999999999999999999999999999 9999999999999887655666666655457889999999999
Q ss_pred ccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceee
Q 014172 305 AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (429)
Q Consensus 305 ~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~ 384 (429)
|++|+|+||+++++++++.+.+.......+.+.+.|.++..+|.. .+.|++++++.++++|+.+.+.|+++ |+++.
T Consensus 242 g~~GlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~ 317 (385)
T PRK09276 242 NMTGWRIGFAVGNADLIAGLGKVKSNVDSGVFQAIQEAGIAALNG---PQEVVEELRKIYQERRDILVEGLRKL-GLEVE 317 (385)
T ss_pred CCcchhheeeeCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcC---cHHHHHHHHHHHHHHHHHHHHHHHhC-CCccc
Confidence 999999999999999999998887766677888899999999975 47889999999999999999999998 88888
Q ss_pred cCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 385 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 385 ~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.|++|||+|++++.. .++.+++++|++++||.|
T Consensus 318 ~~~~~~~~~v~~~~~-----------~~~~~l~~~ll~~~gi~v 350 (385)
T PRK09276 318 PPKATFYVWAPVPKG-----------YTSAEFATLLLDKAGVVV 350 (385)
T ss_pred CCCcceEEEEECCCC-----------CCHHHHHHHHHHhCCEEE
Confidence 899999999999853 368899999998889976
No 8
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=6.4e-53 Score=419.16 Aligned_cols=344 Identities=28% Similarity=0.503 Sum_probs=305.5
Q ss_pred cccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHHh
Q 014172 69 SPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKE 147 (429)
Q Consensus 69 s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~ 147 (429)
++++..+..+.+..+.+.+.+.+..|+++++|+.|+|++++|+.+.+++.+.+.. ...+|++..|.++||+++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~ 82 (383)
T TIGR03540 3 ADRIENLPPYLFAEIDKKKAEKKAEGVDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKR 82 (383)
T ss_pred chhhccCChhHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 4556666666666677777777778889999999999999899999999987754 357899889999999999999998
Q ss_pred hcCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 148 ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 148 ~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
.+|.+++++ +|++|+|+++++..++++++++||.|++++|+|+.|...++..|++++.+|++.++++.+|++++++.+.
T Consensus 83 ~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~ 162 (383)
T TIGR03540 83 RFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIA 162 (383)
T ss_pred hhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhcc
Confidence 889877776 6999999999999999999999999999999999999999999999999999877778889999999988
Q ss_pred cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccc
Q 014172 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (429)
Q Consensus 227 ~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 306 (429)
+++++|++++||||||.+++.+++++|+++|++| +++||+||+|.++.|++....++..+....+++|+++||||.||+
T Consensus 163 ~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~ 241 (383)
T TIGR03540 163 KKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEY-NIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNM 241 (383)
T ss_pred ccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHc-CEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCC
Confidence 8999999999999999999999999999999999 999999999999988765566666665445788999999999999
Q ss_pred ccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC
Q 014172 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (429)
Q Consensus 307 ~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p 386 (429)
+|+|+||+++++++++.+.........+++.+.|.++..++.. ..+|++++++.++++++.+.+.|+++ |+.+..|
T Consensus 242 ~GlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~ 317 (383)
T TIGR03540 242 TGWRIGMAVGNADLIAGLGKVKTNVDSGVFQAIQYAAIAALNG---PQDVVKEIRKIYQRRRDLLLEALKKI-GIDVEKP 317 (383)
T ss_pred ccceeeEEeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHhC-CCEecCC
Confidence 9999999999999999998877766677888999999999986 47889999999999999999999998 8999899
Q ss_pred CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 387 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++|+|+|++++.. .++.+|+++|++++||.|
T Consensus 318 ~~~~~~~~~l~~~-----------~~~~~~~~~ll~~~gi~v 348 (383)
T TIGR03540 318 KATFYVWVPVPEG-----------YTSAEFAARLLEETGVVV 348 (383)
T ss_pred CcceEEEEECCCC-----------CCHHHHHHHHHHHCCEEE
Confidence 9999999999753 368899999998889976
No 9
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.2e-53 Score=420.05 Aligned_cols=347 Identities=26% Similarity=0.477 Sum_probs=305.5
Q ss_pred ccCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHH
Q 014172 66 VSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHK 144 (429)
Q Consensus 66 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~ 144 (429)
+.+++++.++.++.+..+.+.+.+.+..|+++|+|+.|+|+.++|+.+.+++.+.+... ...|++..|.++||++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~ 85 (394)
T PRK05942 6 ITPADRLQALPPYVFARLDELKARAREQGLDLIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDW 85 (394)
T ss_pred cchhhhhccCCCcHHHHHHHHHHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHH
Confidence 34677787878776666666676777788889999999999877777888877776533 46899889999999999999
Q ss_pred HHhhcCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHh
Q 014172 145 LKEENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLES 223 (429)
Q Consensus 145 l~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~ 223 (429)
+++.+|.+++++ +|++|+|+++++..++.+++++||+|++++|+|+.+...+...|++++.++++.+++|.+|++++++
T Consensus 86 ~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 165 (394)
T PRK05942 86 YHRRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPE 165 (394)
T ss_pred HHHHHCCCcCCCCeEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHH
Confidence 999889888887 5999999999999999999999999999999999999999999999999999876778899999999
Q ss_pred hcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChh
Q 014172 224 KLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKA 303 (429)
Q Consensus 224 ~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 303 (429)
.+.+++|+|++++||||||.+++.+++++|+++|++| +++||+||+|.++.|++....++.+++...+++|+++||||.
T Consensus 166 ~~~~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~ 244 (394)
T PRK05942 166 EVAQQAKILYFNYPSNPTTATAPREFFEEIVAFARKY-EIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKT 244 (394)
T ss_pred hccccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHc-CeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhc
Confidence 9988999999999999999999999999999999999 999999999999988765555666665445678999999999
Q ss_pred cccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCcee
Q 014172 304 FAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM 383 (429)
Q Consensus 304 ~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~ 383 (429)
||++|+|+||+++++++++.+.........+++.++|.++..+|+. .++++++.++.|+++++++.+.|+++ |+.+
T Consensus 245 ~~~~GlRiG~i~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~ 320 (394)
T PRK05942 245 YNMAGWRVGFVVGNRHIIQGLRTLKTNLDYGIFSALQKAAETALQL---PDSYLQQVQERYRTRRDFLIQGLGEL-GWNI 320 (394)
T ss_pred cCChhhheeeeecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHC-CCee
Confidence 9999999999999999999999887766667889999999999975 47789999999999999999999987 8888
Q ss_pred ecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 384 SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 384 ~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+|++|+|+|++++.. .++.+++.++++++||.|
T Consensus 321 ~~~~~~~f~~~~~~~~-----------~~~~~~~~~~l~~~gV~v 354 (394)
T PRK05942 321 PPTKATMYLWVPCPVG-----------MGSTDFALNVLQKTGVVV 354 (394)
T ss_pred cCCCeeeEEEEECCCC-----------CCHHHHHHHHHHHCCEEE
Confidence 8899999999999853 267889998998889986
No 10
>PLN02368 alanine transaminase
Probab=100.00 E-value=7.4e-54 Score=425.48 Aligned_cols=329 Identities=23% Similarity=0.353 Sum_probs=282.4
Q ss_pred cCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCC--------CC----------------------ChHHHHHH
Q 014172 67 SLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPD--------FD----------------------TPVLIAEA 116 (429)
Q Consensus 67 ~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~--------~~----------------------~p~~v~~a 116 (429)
.+++++..++.+.+..+..++.++++.|.++|+|++|+|+ +. +|+.+.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a 89 (407)
T PLN02368 10 SLNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARA 89 (407)
T ss_pred hcCHHHHhhhhhcCCHHHHHHHHHHHHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHH
Confidence 4788899999998888889999998899999999999997 31 45566666
Q ss_pred HHHHHH--cCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhc-CCCCEEEEcCCCCCChH
Q 014172 117 GINAIR--EGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC-SPGDEVIIPAPFWVSYP 193 (429)
Q Consensus 117 ~~~~~~--~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~-~~gd~Vlv~~p~y~~~~ 193 (429)
+..... .+..+|++..|.++||++|++++.+.+|+.+++++|++|+|+++++..++.+++ ++||+|++++|+|+.|.
T Consensus 90 ~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~ 169 (407)
T PLN02368 90 KHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYS 169 (407)
T ss_pred HHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHH
Confidence 544221 235789999999999999999999988988999999999999999999999997 79999999999999999
Q ss_pred HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEE
Q 014172 194 EMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 267 (429)
Q Consensus 194 ~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~ 267 (429)
..++..|++++.++++.+++|.+|++.+++.+++ ++|++++++||||||.+++.+++++|+++|++| |++||+
T Consensus 170 ~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~-~~~II~ 248 (407)
T PLN02368 170 ATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQE-RLVLLG 248 (407)
T ss_pred HHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHc-CCEEEE
Confidence 9999999999999998777899999999998864 689999999999999999999999999999999 999999
Q ss_pred ccCCcccccCCC-CCCccccC----CC---CCCceEEEeccChhc-ccccceeeEEE---cCHHHHHHHHHHhhcccCCC
Q 014172 268 DEIYEHIIYAPA-THTSFASL----PG---MWERTLTVNGFSKAF-AMTGWRLGYIA---GPKHFVAACNKIQSQFTSGA 335 (429)
Q Consensus 268 Deay~~~~~~~~-~~~~~~~~----~~---~~~~~i~~~S~SK~~-~~~G~R~G~v~---~~~~~~~~l~~~~~~~~~~~ 335 (429)
||+|.++.|++. .+.++..+ .. ..+++|+++||||.| ||+|||+||++ +++++++.+.+... ...++
T Consensus 249 DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~-~~~~~ 327 (407)
T PLN02368 249 DEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVAS-IALSP 327 (407)
T ss_pred EccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhc-ccCCC
Confidence 999999999764 34454432 11 135899999999999 89999999999 58899999888743 45678
Q ss_pred chHHHHHHHHHHhcCCCC----hHHH---HHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecC
Q 014172 336 SSISQKAGVAALGLGYAG----GEVV---SKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFS 397 (429)
Q Consensus 336 ~~~~q~aa~~~l~~~~~~----~~~~---~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~ 397 (429)
+.++|.++.++|+..... ..+. +++++.|++||+++.+.|++++|+.+..|+|+||+|++++
T Consensus 328 ~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i~ 396 (407)
T PLN02368 328 NVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQIK 396 (407)
T ss_pred CcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCCC
Confidence 999999999999753100 1233 4578999999999999999999999999999999998775
No 11
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=4.8e-53 Score=434.27 Aligned_cols=353 Identities=25% Similarity=0.413 Sum_probs=299.7
Q ss_pred ccccCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCC---CCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHH
Q 014172 64 VDVSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP---DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSA 140 (429)
Q Consensus 64 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~---~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ 140 (429)
+.+.+|+++.++.++....+...+++++..|.++|+|+.|+| ++++|+.+.+++.+.+.. ..+|++..|..+||++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~-~~~Y~~~~G~~~lRea 193 (517)
T PRK13355 115 RTFKKSHKLDNVLYDVRGPVVDEANRMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTD-TEGYSDSKGLFSARKA 193 (517)
T ss_pred cCCChhHHhhccCccHHHHHHHHHHHHHHcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhc-CCCCCCCcChHHHHHH
Confidence 346789999999999888888889988888999999999998 577899999999988764 4679999999999999
Q ss_pred HHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHH
Q 014172 141 ICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKV 220 (429)
Q Consensus 141 ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~ 220 (429)
|++++.+.++..+++++|++|+|+++++.+++.+++++||+|++++|+|+.|...++..|++++.++++++++|.+|+++
T Consensus 194 ia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~ 273 (517)
T PRK13355 194 IMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDD 273 (517)
T ss_pred HHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHH
Confidence 99999887766688999999999999999999999999999999999999999999999999999999877789999999
Q ss_pred HHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEecc
Q 014172 221 LESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGF 300 (429)
Q Consensus 221 l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 300 (429)
+++++++++++|++++||||||.+++.+++++|+++|++| +++||+||+|.++.|++..+.++..+.. ...+++++||
T Consensus 274 l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~-~~~ii~DE~Y~~~~~~~~~~~s~~~~~~-~~~vi~~~S~ 351 (517)
T PRK13355 274 IRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREH-QLIIFSDEIYDRLVMDGLEHTSIASLAP-DLFCVTFSGL 351 (517)
T ss_pred HHHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHc-CcEEEEehhhhhhcCCCCCcccHHHhCC-CCeEEEEecc
Confidence 9999999999999999999999999999999999999999 9999999999999998765666666543 2357888999
Q ss_pred ChhcccccceeeEEEc--CHHH----HHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHH
Q 014172 301 SKAFAMTGWRLGYIAG--PKHF----VAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKS 374 (429)
Q Consensus 301 SK~~~~~G~R~G~v~~--~~~~----~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~ 374 (429)
||.|+++|||+||+++ ++++ ++.+... .....+++.++|.++..+|.......+++....+ +.++|+++.+.
T Consensus 352 SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~-~~~~r~~l~~~ 429 (517)
T PRK13355 352 SKSHMIAGYRIGWMILSGNKRIAKDYIEGLNML-ANMRLCSNVPAQSIVQTALGGHQSVKDYLVPGGR-VYEQRELVYNA 429 (517)
T ss_pred hhhccCcccceEEEEeeCchhhHHHHHHHHHHH-hcCcCCcChHHHHHHHHHhcCCccHHHHHHHHHH-HHHHHHHHHHH
Confidence 9999999999999995 4543 3444332 3344578899999999999642112456665544 44568999999
Q ss_pred hccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 375 FGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 375 L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|++++|+++.+|+|+||+|++++... -++.++.+++.+|+++.||+|
T Consensus 430 L~~~~g~~~~~p~g~fy~~~~l~~~~-------~~~~~~~~~~~~ll~~~gV~v 476 (517)
T PRK13355 430 LNAIPGISAVKPKAAFYIFPKIDVKK-------FNIHDDEQFALDLLHDKKVLI 476 (517)
T ss_pred HhcCCCcccCCCCeeeEEEeecCccc-------CCCCCHHHHHHHHHHhCCEEE
Confidence 99998999999999999999987420 011357789999998889986
No 12
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-52 Score=416.22 Aligned_cols=342 Identities=32% Similarity=0.577 Sum_probs=299.8
Q ss_pred CcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHh
Q 014172 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 147 (429)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~ 147 (429)
+++++..+....+.++.+..+ ...++|+|+.|+|++++++.+.+++.+.......+|++..|.++||+++++++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~----~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~ 81 (384)
T PRK06348 6 LAKKYQQMEVNIMAEIATLAK----KFPDIIDLSLGDPDLITDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSK 81 (384)
T ss_pred HHHHHhcCCccHHHHHHHHHH----hcCCcEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHH
Confidence 466666666665555544432 2346899999999998888888877766655667899999999999999999999
Q ss_pred hcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc
Q 014172 148 ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 227 (429)
Q Consensus 148 ~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~ 227 (429)
.+|+.+++++|++|+|+++++.+++.+++++||+|++++|+|..|...++..|++++.+++.++++|.+|++.+++.+++
T Consensus 82 ~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~ 161 (384)
T PRK06348 82 NYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITS 161 (384)
T ss_pred HhCCCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCc
Confidence 99998999999999999999999999999999999999999999999999999999999986666788999999999988
Q ss_pred CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccc
Q 014172 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 307 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 307 (429)
++++|++++||||||.+++.+++++|+++|++| +++||+||+|.++.|++ ...++..+....+++|+++||||.+|++
T Consensus 162 ~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~-~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~vi~~~SfSK~~~l~ 239 (384)
T PRK06348 162 KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEY-DLFIISDEVYDGFSFYE-DFVPMATLAGMPERTITFGSFSKDFAMT 239 (384)
T ss_pred CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHC-CeEEEEecccccceeCC-CccchhhcCCCcCcEEEEecchhccCCc
Confidence 999999999999999999999999999999999 99999999999998865 3445556654468999999999999999
Q ss_pred cceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCC
Q 014172 308 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 387 (429)
Q Consensus 308 G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~ 387 (429)
|+|+||+++++++++.+.........+++.+.|.++..++.. .+++++++++.|+++++.+.+.|++++++++.+|+
T Consensus 240 GlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~ 316 (384)
T PRK06348 240 GWRIGYVIAPDYIIETAKIINEGICFSAPTISQRAAIYALKH---RDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPK 316 (384)
T ss_pred cccceeeecCHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCC
Confidence 999999999999999998887777778899999999999975 47789999999999999999999988788888999
Q ss_pred ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 388 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
||||+|++++.. + .++.+++++|++++||.|
T Consensus 317 gg~~~~~~~~~~-~---------~~~~~l~~~l~~~~gv~v 347 (384)
T PRK06348 317 GSIYAFINIKKT-G---------LSSVEFCEKLLKEAHVLV 347 (384)
T ss_pred eeEEEEEecccC-C---------CCHHHHHHHHHHhCCEEE
Confidence 999999999742 0 268899999998889976
No 13
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=2.5e-52 Score=415.25 Aligned_cols=344 Identities=30% Similarity=0.523 Sum_probs=307.6
Q ss_pred cCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHH
Q 014172 67 SLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLK 146 (429)
Q Consensus 67 ~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~ 146 (429)
.++++++++.++.+.++...+++....++++|+|+.|+|++++|+.+.+++.+.+..+...|++..|.++||+++++++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~ 83 (387)
T PRK08960 4 GYSRRSRDIEPFHVMALLARANELEAAGHDVIHLEIGEPDFTTAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYA 83 (387)
T ss_pred chhhHHHhCCchHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHH
Confidence 45778888889988898888888877888999999999999999999999999887666789999999999999999999
Q ss_pred hhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 147 EENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 147 ~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
+.+|+.+++++|++|+|+++++..++.+++++||+|++++|+|+.+...++..|++++.++++.+++|.+|++.+++.++
T Consensus 84 ~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~ 163 (387)
T PRK08960 84 QRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWN 163 (387)
T ss_pred HHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhC
Confidence 98998899999999999999999999999999999999999999999999999999999999776678899999999999
Q ss_pred cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccc
Q 014172 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (429)
Q Consensus 227 ~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 306 (429)
++++++++++||||||.+++.+++++|+++|++| |++||+||+|.++.|++. ..++..+ .+++++++||||.||+
T Consensus 164 ~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~-~~~li~De~Y~~~~~~~~-~~~~~~~---~~~vi~~~S~SK~~g~ 238 (387)
T PRK08960 164 ADTVGALVASPANPTGTLLSRDELAALSQALRAR-GGHLVVDEIYHGLTYGVD-AASVLEV---DDDAFVLNSFSKYFGM 238 (387)
T ss_pred ccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHc-CCEEEEEccccccccCCC-CCChhhc---cCCEEEEeecccccCC
Confidence 8899999999999999999999999999999999 999999999999888643 3344333 4689999999999999
Q ss_pred ccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCcee-ec
Q 014172 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM-SE 385 (429)
Q Consensus 307 ~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~-~~ 385 (429)
+|+|+||+++++++++.+.+.......+++.+.|.++..+|... ..+++.+.++.|+++|+.+.+.|+++ |+.+ ..
T Consensus 239 ~GlRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~ 315 (387)
T PRK08960 239 TGWRLGWLVAPPAAVPELEKLAQNLYISASTPAQHAALACFEPE--TLAILEARRAEFARRRDFLLPALREL-GFGIAVE 315 (387)
T ss_pred cccEEEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhhcC--cHHHHHHHHHHHHHHHHHHHHHHHhc-CCcCCcC
Confidence 99999999999999999988887777788999999999998742 25789999999999999999999987 7664 47
Q ss_pred CCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 386 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 386 p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|+||+|+|++++... .++.+|+++|++++||.|
T Consensus 316 p~g~~f~~~~~~~~~----------~~~~~~~~~ll~~~gi~v 348 (387)
T PRK08960 316 PQGAFYLYADISAFG----------GDAFAFCRHFLETEHVAF 348 (387)
T ss_pred CCeeEEEEEeccccC----------CCHHHHHHHHHHhCCEEE
Confidence 999999999998520 267899999998889986
No 14
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=2.8e-52 Score=416.24 Aligned_cols=339 Identities=25% Similarity=0.422 Sum_probs=295.7
Q ss_pred cccccccCCchhHHHHHHHHHH-HhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHh
Q 014172 69 SPRVNAVKPSKTVAITDQATAL-AQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 147 (429)
Q Consensus 69 s~~~~~~~~~~~~~~~~~~~~~-~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~ 147 (429)
++++.+++++.+..+.+.+.++ ...|+++|+|+.|+|++++|+.+.+++.+.+. ...+|++..|.++||++|++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~ 80 (396)
T PRK09147 2 NPRLDRLQPYPFEKLRALFAGVTPPADLPPISLSIGEPKHPTPAFIKDALAANLD-GLASYPTTAGLPALREAIAAWLER 80 (396)
T ss_pred cchhhcCCcchHHHHHHHHHhhhhccCCCeEecCCCCCCCCCCHHHHHHHHHHhh-hhcCCCCCCCCHHHHHHHHHHHHH
Confidence 3566777788888888877776 44688999999999999999999999988765 467899899999999999999999
Q ss_pred hcCCC-CCCC-cEEEecChHHHHHHHHHHhcCC---CCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHH
Q 014172 148 ENGLS-YTPD-QILVSNGAKQSILQAVLAVCSP---GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLE 222 (429)
Q Consensus 148 ~~g~~-~~~~-~i~~t~G~~~al~~~l~~l~~~---gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~ 222 (429)
.+|++ ++++ +|++|+|+++++.+++++++++ ||.|++++|+|..|...++..|++++.+|++++++|.+|++.++
T Consensus 81 ~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~ 160 (396)
T PRK09147 81 RYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVP 160 (396)
T ss_pred HhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHH
Confidence 89988 8885 8999999999999999999999 89999999999999999999999999999987777899999999
Q ss_pred hhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCC-CCCccc----cCC-CCCCceEE
Q 014172 223 SKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA-THTSFA----SLP-GMWERTLT 296 (429)
Q Consensus 223 ~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~-~~~~~~----~~~-~~~~~~i~ 296 (429)
+.+.+++|++++|+||||||.+++.+++++|+++|++| +++||+||+|.++.|++. ...+.. .+. ...+++|+
T Consensus 161 ~~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ 239 (396)
T PRK09147 161 AEVWARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRY-GFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVV 239 (396)
T ss_pred HHHhhccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHc-CeEEEeeccccccccCCCCCCchhhhhccccCccccccEEE
Confidence 88877899999999999999999999999999999999 999999999999988753 121211 111 12579999
Q ss_pred EeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhc
Q 014172 297 VNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG 376 (429)
Q Consensus 297 ~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~ 376 (429)
++||||.|+++|+|+||+++++++++.+.+.......+++.+.|.++.+++.. .+++.+.++.|+++|+.+.+.|+
T Consensus 240 ~~S~SK~~~~~GlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~----~~~~~~~~~~~~~~~~~~~~~L~ 315 (396)
T PRK09147 240 FHSLSKRSNVPGLRSGFVAGDAALLKKFLLYRTYHGCAMPPAVQAASIAAWND----EAHVRENRALYREKFDAVTPILA 315 (396)
T ss_pred EeccccccCCccceeeeecCCHHHHHHHHHHhhhcccCCCHHHHHHHHHHhcc----hhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998777656667889999998888863 67899999999999999999998
Q ss_pred cCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 377 ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 377 ~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+. +.+..|++|+|+|++++ . ++.+++++|++++||.+
T Consensus 316 ~~--~~~~~p~~g~f~~~~~~-~------------~~~~~~~~ll~~~gv~v 352 (396)
T PRK09147 316 PV--LDVQLPDAGFYLWAKVP-G------------DDTEFARRLYADYNVTV 352 (396)
T ss_pred Hh--cCCCCCCeeEEEEEECC-C------------CHHHHHHHHHHhCCEEE
Confidence 74 56668999999999997 2 57899999998889976
No 15
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=1.6e-52 Score=427.04 Aligned_cols=359 Identities=21% Similarity=0.348 Sum_probs=296.5
Q ss_pred cCcccccccCCchhHHHHHHHHHHHh---------cCCCeEEcCCCCCC----------------CCCh-----------
Q 014172 67 SLSPRVNAVKPSKTVAITDQATALAQ---------AGVSVIRLAAGEPD----------------FDTP----------- 110 (429)
Q Consensus 67 ~~s~~~~~~~~~~~~~~~~~~~~~~~---------~g~~~i~L~~g~~~----------------~~~p----------- 110 (429)
.+++++.+++++....+..++++++. +|.++|+|++|+|+ +.+|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~ 88 (481)
T PTZ00377 9 DINPRVVAAEYAVRGLVPARAAEIKEELKTGKGKYPFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSL 88 (481)
T ss_pred ccCHHHhhhhhhcCChHHHHHHHHHHHHhcCCccCCcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCcccccc
Confidence 48999999999988888888888876 55799999999996 7764
Q ss_pred --HHHHHHHHHHHHc---CCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhc-CCCCEEEE
Q 014172 111 --VLIAEAGINAIRE---GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC-SPGDEVII 184 (429)
Q Consensus 111 --~~v~~a~~~~~~~---~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~-~~gd~Vlv 184 (429)
..+++++.+.+.. ....|++..|.++||++|++++.+.+|+++++++|++|+|+++++.+++++++ ++||+|++
T Consensus 89 ~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv 168 (481)
T PTZ00377 89 FPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMI 168 (481)
T ss_pred CCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEE
Confidence 3778877766654 24679999999999999999999999999999999999999999999999998 79999999
Q ss_pred cCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------CCcEEEEcCCCCCccCCCCHHHHHHHHHHHH
Q 014172 185 PAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVA 258 (429)
Q Consensus 185 ~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~ 258 (429)
+.|+|+.|...++..|++++.++++++++|.+|++.+++++++ ++|++++++||||||.+++.+++++|+++|+
T Consensus 169 ~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~ 248 (481)
T PTZ00377 169 PIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCY 248 (481)
T ss_pred CCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHH
Confidence 9999999999999999999999998778899999999999874 7899999999999999999999999999999
Q ss_pred hCCCeEEEEccCCcccccCC-CCCCcccc----CCCC---CCceEEEeccChh-cccccceeeEEEc---CHHHHHHHHH
Q 014172 259 KHPRLLVLSDEIYEHIIYAP-ATHTSFAS----LPGM---WERTLTVNGFSKA-FAMTGWRLGYIAG---PKHFVAACNK 326 (429)
Q Consensus 259 ~~~~i~vi~Deay~~~~~~~-~~~~~~~~----~~~~---~~~~i~~~S~SK~-~~~~G~R~G~v~~---~~~~~~~l~~ 326 (429)
+| +++||+||+|.++.|++ ..+.++.. +... ..++|+++||||. ++|+|||+||+++ ++++++.+.+
T Consensus 249 ~~-~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~ 327 (481)
T PTZ00377 249 EK-GIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYK 327 (481)
T ss_pred HC-CCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHH
Confidence 99 99999999999999953 33444432 2221 1368999999997 5999999999986 8999999988
Q ss_pred HhhcccCCCchHHHHHHHHHHhcCCC----ChHH---HHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCC-
Q 014172 327 IQSQFTSGASSISQKAGVAALGLGYA----GGEV---VSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFST- 398 (429)
Q Consensus 327 ~~~~~~~~~~~~~q~aa~~~l~~~~~----~~~~---~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~- 398 (429)
... ...+++.++|.++..+|+.... .+.+ ++++++.|+++|+.+.+.|++++|+++..|+||||+|++++.
T Consensus 328 ~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~~~l~ 406 (481)
T PTZ00377 328 LAS-INLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPRIELP 406 (481)
T ss_pred Hhh-eecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEeeccCc
Confidence 764 3446899999999999964211 1223 344455689999999999999889999999999999987642
Q ss_pred -ccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 399 -YYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 399 -~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.......+ ..+.++.+++.+|++++||.|
T Consensus 407 ~~~~~~~~~-~~~~~~~~~~~~ll~~~gV~v 436 (481)
T PTZ00377 407 EKAIQEAKE-RGLAPDVLYCLELLESTGIVV 436 (481)
T ss_pred hhhHHHHHh-cCCCcHHHHHHHHHHHcCEEE
Confidence 10000000 011245678889999999986
No 16
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=1e-51 Score=412.77 Aligned_cols=347 Identities=26% Similarity=0.428 Sum_probs=300.6
Q ss_pred cccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHHh
Q 014172 69 SPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKE 147 (429)
Q Consensus 69 s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~ 147 (429)
++++..+.++.+.++.+.++..+..|+++|+|+.|+|++++|+.+.+++.+.+.. ...+|++..|.++||+++++++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~ 83 (405)
T PRK09148 4 FHRIRRLPPYVFEQVNRLKAAARAAGADIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYAR 83 (405)
T ss_pred hhhhhcCCccHHHHHHHHHHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHH
Confidence 4667777788777777777777778889999999999998888899988887653 346899989999999999999998
Q ss_pred hcCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 148 ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 148 ~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
.+|..++++ +|++|+|+++++..++.+++++||+|++++|+|+.|...++..|++++.++++.++++..+++++.+...
T Consensus 84 ~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~ 163 (405)
T PRK09148 84 RFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSI 163 (405)
T ss_pred HhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhcc
Confidence 889888887 8999999999999999999999999999999999999999999999999999766656556666555455
Q ss_pred cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccc
Q 014172 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (429)
Q Consensus 227 ~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 306 (429)
++++++++++||||||.+++.+++++|+++|++| +++||+||+|.++.|++....++..++...+++|+++||||.+|+
T Consensus 164 ~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~-~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~ 242 (405)
T PRK09148 164 PKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKH-DIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSM 242 (405)
T ss_pred ccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHc-CeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCC
Confidence 6889999999999999999999999999999999 999999999999988765445566555445678999999999999
Q ss_pred ccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC
Q 014172 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (429)
Q Consensus 307 ~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p 386 (429)
+|+|+||+++++++++.+.+.......+++.+.|.++..+|.. .+++++++++.|+++|+.+.+.|+++ |+.+..|
T Consensus 243 pGlR~G~~v~~~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~---~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p 318 (405)
T PRK09148 243 AGWRMGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATAALNG---PQDCIAEMRELYKKRRDVLVESFGRA-GWDIPPP 318 (405)
T ss_pred cchheeeeeCCHHHHHHHHHHHHHhccCCChHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHc-CCccCCC
Confidence 9999999999999999999887776777889999999999975 36789999999999999999999987 7887789
Q ss_pred CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 387 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++|+|+|+++|..+. ..++.+++++|+++.||.|
T Consensus 319 ~~g~f~~~~l~~~~~--------~~~~~~~~~~ll~~~gV~v 352 (405)
T PRK09148 319 AASMFAWAPIPEAFR--------HLGSLEFSKLLVEKADVAV 352 (405)
T ss_pred CeeEEEEEECCCccC--------CCCHHHHHHHHHHhCCEEE
Confidence 999999999985321 0246899999998789976
No 17
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.7e-52 Score=413.01 Aligned_cols=347 Identities=24% Similarity=0.434 Sum_probs=299.5
Q ss_pred cccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHHh
Q 014172 69 SPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKE 147 (429)
Q Consensus 69 s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~ 147 (429)
++++.++.++.+..+...+++.++.+.++++|+.|+|+.++|+.+.+++.+.+.. ....|++..|..+||+++|+++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~ 86 (403)
T PRK08636 7 FNKIKRLPKYVFAEVNELKMAARRAGEDIIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKR 86 (403)
T ss_pred HHHHHhCCccHHHHHHHHHHHHHhcCCCEEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHH
Confidence 3456667777777888888888888888999999999988888788887776654 367899999999999999999999
Q ss_pred hcCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHH----H
Q 014172 148 ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVL----E 222 (429)
Q Consensus 148 ~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l----~ 222 (429)
.+|+.++++ +|++|+|+++++.+++++++++||.|++++|+|+.|...++..|++++.++++.++++.+|++.+ +
T Consensus 87 ~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 166 (403)
T PRK08636 87 KYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLE 166 (403)
T ss_pred HhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHH
Confidence 999888887 79999999999999999999999999999999999999999999999999986556688998754 5
Q ss_pred hhcc---cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEec
Q 014172 223 SKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNG 299 (429)
Q Consensus 223 ~~l~---~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S 299 (429)
++++ ++++++++++||||||.+++.+++++|+++|++| +++||+||+|.++.|++...+++..++...+++|+++|
T Consensus 167 ~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~-~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S 245 (403)
T PRK08636 167 KALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKE-RFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYT 245 (403)
T ss_pred HHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHc-CcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEe
Confidence 5553 4788999999999999999999999999999999 99999999999999876555666776554567888999
Q ss_pred cChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC
Q 014172 300 FSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE 379 (429)
Q Consensus 300 ~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~ 379 (429)
|||.||++|+|+||+++++++++.+.+.......+++.+.|.++..+++. ..++++++++.|+++++.+.+.|++.
T Consensus 246 ~SK~~~~~GlRiG~iv~~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~L~~~- 321 (403)
T PRK08636 246 LSKSYNMAGWRVGFVVGNKKLVGALKKIKSWLDYGMFTPIQVAATIALDG---DQSCVEEIRETYRKRRDVLIESFANA- 321 (403)
T ss_pred cccccCCccceeeeeeCCHHHHHHHHHHHHHhcccCChHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHC-
Confidence 99999999999999999999999998877655567788899888877764 36789999999999999999999997
Q ss_pred CceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 380 GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 380 g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|+.+..|++|+|+|++++.... ..++.+++.+|++++||.|
T Consensus 322 ~~~~~~p~~g~~~~~~l~~~~~--------~~~~~~l~~~ll~~~gV~v 362 (403)
T PRK08636 322 GWELQKPRASMFVWAKIPEPAR--------HLGSLEFSKQLLTEAKVAV 362 (403)
T ss_pred CCcccCCCcceEEEEECCCccC--------CCCHHHHHHHHHHhCCEEE
Confidence 7888899999999999985311 0247899999998889986
No 18
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-51 Score=410.80 Aligned_cols=358 Identities=43% Similarity=0.727 Sum_probs=311.6
Q ss_pred cCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHH
Q 014172 67 SLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLK 146 (429)
Q Consensus 67 ~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~ 146 (429)
.+++|+..+.++.+..+.+.+++....+.++|+|+.|.|++++|+.+.+++.+.+.....+|++..|.++||++++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~ 84 (402)
T PRK06107 5 VPAARVSRIKPSPSTAAAARARELRAAGRSIVDLTVGEPDFDTPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLE 84 (402)
T ss_pred hhhHHhhhcCccHHHHHHHHHHHHHhccCCEEEcCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 47778887777777777777887777788899999999999988999999999887666789999999999999999999
Q ss_pred hhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 147 EENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 147 ~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
+.+|..+++++|++|+|+++++..++.+++++||+|++++|+|..|...+...|++++.++++.+++|.+|++.+++.+.
T Consensus 85 ~~~g~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~ 164 (402)
T PRK06107 85 RRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAIT 164 (402)
T ss_pred HhcCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcC
Confidence 98898889999999999999999999999999999999999999999999999999999998666678899999999998
Q ss_pred cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCC-CCCCceEEEeccChhcc
Q 014172 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP-GMWERTLTVNGFSKAFA 305 (429)
Q Consensus 227 ~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~~ 305 (429)
++++++++++|+||||.+++.+++++|+++|++|++++||+||+|.++.|.+...+++..+. +..+++++++||||.|+
T Consensus 165 ~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 244 (402)
T PRK06107 165 PRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYA 244 (402)
T ss_pred cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhc
Confidence 89999999999999999999999999999999964799999999999988765555555553 23578999999999999
Q ss_pred cccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeec
Q 014172 306 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 385 (429)
Q Consensus 306 ~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~ 385 (429)
++|+|+||+++++++++.+.........+++.+.|.++..+|.. ...++++.++.|+++++.+.+.|++++|+++.+
T Consensus 245 ~pGlRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~ 321 (402)
T PRK06107 245 MTGWRIGYAAGPADLIAAINKLQSQSSSCPSSISQAAAAAALNG---DQSFVTESVAVYKQRRDYALALLNAIPGLSCLV 321 (402)
T ss_pred CcccceeeeecCHHHHHHHHHHHHhcccCCChHHHHHHHHHhcC---ChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccC
Confidence 99999999999999999999988777788999999999999975 367899999999999999999999887899889
Q ss_pred CCceEEEEEecCCccCCc-ccCCCCCCChHHHHHHHHHhCCeec
Q 014172 386 PQGAFYLFIDFSTYYGSE-AEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 386 p~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|+||||+|++++...+.. .++ ....++.+++++|++++||.+
T Consensus 322 p~gg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~gv~v 364 (402)
T PRK06107 322 PDGAFYLYVNCAGLIGKTTPEG-KVLETDQDVVLYLLDSAGVAV 364 (402)
T ss_pred CCcceEEeeecccccccccccc-cCCCCHHHHHHHHHHhCCEEE
Confidence 999999999985321100 000 011257899999999889986
No 19
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-51 Score=410.98 Aligned_cols=340 Identities=27% Similarity=0.441 Sum_probs=293.1
Q ss_pred CchhHHHHHHHHHHHh--cCCCeEEcCCCCCCCCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHhhcCCC-
Q 014172 77 PSKTVAITDQATALAQ--AGVSVIRLAAGEPDFDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLS- 152 (429)
Q Consensus 77 ~~~~~~~~~~~~~~~~--~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~- 152 (429)
.+.+..+....+.++. +|.++|+|+.|+|++.+++.+.+++.+.+... ...|+ ..|..+||+++++++.+.+|+.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~-~~G~~~lr~aia~~~~~~~g~~~ 102 (410)
T PRK06290 24 IYKFEKIKRAKRAAKEKHPDMELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYA-DNGIQEFKEAAARYMEKVFGVKD 102 (410)
T ss_pred hhHHHHHHHHHHHHhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC-CCCcHHHHHHHHHHHHHHcCCCc
Confidence 4455555555555543 36679999999999999999999988876543 45685 5899999999999999988987
Q ss_pred CCCC-cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcE
Q 014172 153 YTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRL 231 (429)
Q Consensus 153 ~~~~-~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~ 231 (429)
++++ +|++|+|+++++..++.+++++||.|+++.|+|+.|...++..|++++.++++.+++|.+|++.+++.+.+++++
T Consensus 103 ~~~~~~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~ 182 (410)
T PRK06290 103 IDPVTEVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKL 182 (410)
T ss_pred CCCcceEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceE
Confidence 8886 799999999999999999999999999999999999999999999999999987777889999999998888999
Q ss_pred EEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccccccee
Q 014172 232 LILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRL 311 (429)
Q Consensus 232 i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~ 311 (429)
|++++||||||.+++.+++++|+++|++| +++||+||+|.++.|++ .+.++.++....+++|+++||||.+|++|+|+
T Consensus 183 i~l~nP~NPTG~v~s~e~l~~l~~la~~~-~~~iI~DEaY~~~~~~~-~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRi 260 (410)
T PRK06290 183 LYLNYPNNPTGAVATKEFYEEVVDFAKEN-NIIVVQDAAYAALTFDG-KPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRL 260 (410)
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHHHHc-CeEEEEecchhhceeCC-CCcChhcCCCccccEEEEeechhhcCCchhhe
Confidence 99999999999999999999999999999 99999999999998865 33455555544578899999999999999999
Q ss_pred eEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEE
Q 014172 312 GYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY 391 (429)
Q Consensus 312 G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~ 391 (429)
||+++++++++.+......+..+.+.++|.++..+|++ .+++++.++.|+++++.+.+.|+++ |+.+.+|+||||
T Consensus 261 G~ii~~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~g~f~ 335 (410)
T PRK06290 261 AFVVGNELIVKAFATVKDNNDSGQFIAIQKAGIYALDH----PEITEKIREKYSRRLDKLVKILNEV-GFKAEMPGGTFY 335 (410)
T ss_pred EeEEeCHHHHHHHHHHHhccccCCcHHHHHHHHHHhhC----cHHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCeeeE
Confidence 99999999999999888777777888999999999986 4688899999999999999999998 899889999999
Q ss_pred EEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 392 LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 392 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+|+++|.... .+. ...++.+++++|+++++|.+
T Consensus 336 l~v~lp~~~~---~~~-~~~~~~~~~~~Ll~~~~v~~ 368 (410)
T PRK06290 336 LYVKAPKGTK---SGI-KFENAEEFSQYLIKEKLIST 368 (410)
T ss_pred EEEECCCccc---cCC-CCCCHHHHHHHHHHhCCEEE
Confidence 9999985310 000 00268899999999977753
No 20
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=6.3e-52 Score=417.22 Aligned_cols=344 Identities=23% Similarity=0.369 Sum_probs=283.5
Q ss_pred hHHHHHHHHHHHhcCCCeEEcCCCCC---CCCChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCC
Q 014172 80 TVAITDQATALAQAGVSVIRLAAGEP---DFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGLSYTP 155 (429)
Q Consensus 80 ~~~~~~~~~~~~~~g~~~i~L~~g~~---~~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~ 155 (429)
+..+...++++...|.++++|+.|+| ++++|+.+.+++.+.+.. ...+|++..|.++||+++++|+++.+|+.+++
T Consensus 17 ~~~~~~~~~~~~~~g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~ 96 (433)
T PRK06855 17 IRNIVAVAKKLEKLGVKITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITP 96 (433)
T ss_pred HHHHHHHHHHHHhccccccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCH
Confidence 34555566666667888999999999 678899999998887754 45689999999999999999999989999999
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHH-HHcCCEEEEecCCCCCCCCCCHHHHHhhcc--cCCcEE
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA-RIADATPVILPTRISENFLLDPKVLESKLT--EKSRLL 232 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~-~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~--~~~~~i 232 (429)
++|++|+|++++|.+++. ++++||.|++++|+|+.|.... ...|++++.++++++++|.+|+++|++++. ++++++
T Consensus 97 ~~I~it~G~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i 175 (433)
T PRK06855 97 DDIIFFNGLGDAIAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGI 175 (433)
T ss_pred hHEEEcCcHHHHHHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEE
Confidence 999999999999998875 7899999999999999987653 456999999998876778999999999986 467899
Q ss_pred EEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceee
Q 014172 233 ILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLG 312 (429)
Q Consensus 233 ~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G 312 (429)
++++||||||.+++.+++++|+++|++| |++||+||+|.++.|.+..++++.++.. ..++|+++||||.|+++|||+|
T Consensus 176 ~l~~P~NPTG~~~s~~~~~~l~~~a~~~-~~~II~De~Y~~l~~~~~~~~sl~~~~~-~~~~I~~~S~SK~~~~pGlRiG 253 (433)
T PRK06855 176 LLINPDNPTGAVYPKEILREIVDIAREY-DLFIICDEIYNNIVYNGKKTVPLSEVIG-DVPGIALKGISKELPWPGSRCG 253 (433)
T ss_pred EEECCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccccccCCCCCCCHHHHcC-cCCeEEEecCccccCCCcceEE
Confidence 9999999999999999999999999999 9999999999999997655566666643 2468999999999999999999
Q ss_pred EEEcC-----H---HHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceee
Q 014172 313 YIAGP-----K---HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (429)
Q Consensus 313 ~v~~~-----~---~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~ 384 (429)
|++++ + ++++.+..... ...+++.+.|.++..+++++.. +++++++++.|++|++.+.+.|++++|+.+.
T Consensus 254 ~ii~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~-~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~ 331 (433)
T PRK06855 254 WIEVYNADKDEVFKKYINSILNAKM-IEVCSTTLPQMAIPRIMSHPEY-KNYLKERNKRYEKRSNIAYEKLKDVPGLKVN 331 (433)
T ss_pred EEEEeCCchhhHHHHHHHHHHHhhc-cccCCChHHHHHHHHhhcCCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCCeecc
Confidence 99973 2 23333333322 2446789999999999986432 6889999999999999999999988788888
Q ss_pred cCCceEEEEEecCCccCCcccCC----------------CCCCChHHHHHHHHHhCCeec
Q 014172 385 EPQGAFYLFIDFSTYYGSEAEGF----------------GKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 385 ~p~~~~~~~~~l~~~~~~~~~~~----------------~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+|+||||+|+++|+.......+. +...++.+|+.+|+++.||.+
T Consensus 332 ~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v 391 (433)
T PRK06855 332 RTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICV 391 (433)
T ss_pred CCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEE
Confidence 99999999999986321000000 001247789999999999986
No 21
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.4e-51 Score=408.89 Aligned_cols=320 Identities=22% Similarity=0.342 Sum_probs=284.5
Q ss_pred CCeEEcCCCCCC-CCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCC-CcEEEecChHHHHHHH
Q 014172 95 VSVIRLAAGEPD-FDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLSYTP-DQILVSNGAKQSILQA 171 (429)
Q Consensus 95 ~~~i~L~~g~~~-~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-~~i~~t~G~~~al~~~ 171 (429)
.+.|+|+.|+|+ +++|+.+.+++.+.+... ...|++..|.++||++|++++++.+|.++++ ++|++|+|+++++..+
T Consensus 39 ~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~ 118 (405)
T PRK06207 39 GRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFLA 118 (405)
T ss_pred CCceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHH
Confidence 468999999987 456788888888887653 4679888999999999999999999988888 8999999999999999
Q ss_pred HHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCC---CCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHH
Q 014172 172 VLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR---ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKN 248 (429)
Q Consensus 172 l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~ 248 (429)
+.+++++||+|++++|+|+.|...++..|++++.++++ .++++.+|++.|+++++++++++++++||||||.+++.+
T Consensus 119 ~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~e 198 (405)
T PRK06207 119 VAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVYSAE 198 (405)
T ss_pred HHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCCCCcCCCHH
Confidence 99999999999999999999999999999999999985 234688999999999988899999999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHh
Q 014172 249 LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ 328 (429)
Q Consensus 249 ~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~ 328 (429)
++++|+++|++| |++||+||+|.++.|++..+.++..+....+++|+++||||.|+++|+|+||+++++++++.+....
T Consensus 199 ~l~~l~~~a~~~-~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~~l~~~~~~~~ 277 (405)
T PRK06207 199 EIAQIAALARRY-GATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSPAIIDRMEKLQ 277 (405)
T ss_pred HHHHHHHHHHHc-CCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCHHHHHHHHHHH
Confidence 999999999999 9999999999999997755555555544468999999999999999999999999999999999888
Q ss_pred hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCC
Q 014172 329 SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFG 408 (429)
Q Consensus 329 ~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~ 408 (429)
.....+.+.+.|.++..+|+. ...++++..+.++++|+.+.+.|++++++++.+|++|+|+|++++.. .
T Consensus 278 ~~~~~~~~~~~q~a~~~~l~~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~l~~~-~------- 346 (405)
T PRK06207 278 AIVSLRAAGYSQAVLRTWFSE---PDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSYLFPRLPRL-A------- 346 (405)
T ss_pred hHhccCCCHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEeCccc-C-------
Confidence 777778888999999999975 35678888889999999999999988789988899999999999752 0
Q ss_pred CCCChHHHHHHHHHhCCeec
Q 014172 409 KIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 409 ~~~~~~~~~~~Ll~~~gV~v 428 (429)
.++.+++++|++++||.|
T Consensus 347 --~~~~~~~~~l~~~~gV~v 364 (405)
T PRK06207 347 --VSLHDFVKILRLQAGVIV 364 (405)
T ss_pred --CCHHHHHHHHHHhcCEEE
Confidence 267899999987789986
No 22
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=4.3e-51 Score=406.63 Aligned_cols=348 Identities=34% Similarity=0.568 Sum_probs=303.9
Q ss_pred cCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHH
Q 014172 67 SLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLK 146 (429)
Q Consensus 67 ~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~ 146 (429)
.+++++.++.++.+..+...+.+++..++++|+|+.|+|++++|+.+.+++.+.+......|++..|.++||+++|++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~ 81 (388)
T PRK07337 2 RLAARVDAIEPFYVMELAKEAQALERAGRDIIHMGIGEPDFTAPEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYA 81 (388)
T ss_pred chhhHhHhcCchHHHHHHHHHHHHHhcCCCEEEeCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 46778888788878888888877777788899999999999888999999998887666789888999999999999999
Q ss_pred hhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 147 EENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 147 ~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
+.+|..+++++|++|+|+++++..++.+++++||+|++++|+|+.+...++..|++++.+|++.+++|.+|++++++.++
T Consensus 82 ~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (388)
T PRK07337 82 RRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWG 161 (388)
T ss_pred HHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcC
Confidence 98998889999999999999999999999999999999999999999999999999999999766678899999999999
Q ss_pred cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccc
Q 014172 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (429)
Q Consensus 227 ~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 306 (429)
+++++|++++||||||.+++.+++++|+++|++| +++||+||+|.++.|.+. ..+...+ .+++|+++||||.||+
T Consensus 162 ~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~~-~~~~~~~---~~~vi~~~S~SK~~~~ 236 (388)
T PRK07337 162 ERTRGVLLASPSNPTGTSIAPDELRRIVEAVRAR-GGFTIVDEIYQGLSYDAA-PVSALSL---GDDVITINSFSKYFNM 236 (388)
T ss_pred ccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHC-CCEEEEeccccccccCCC-CcChhhc---cCCEEEEEechhhcCC
Confidence 9999999999999999999999999999999999 999999999999887653 3333332 4679999999999999
Q ss_pred ccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCcee-ec
Q 014172 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM-SE 385 (429)
Q Consensus 307 ~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~-~~ 385 (429)
+|+|+||+++++++++.+.+.......+.+.+.|.++..++..+. .+++++.++.|+++|+++.+.|+++ |+.+ ..
T Consensus 237 ~G~RiG~~~~~~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~~~ 313 (388)
T PRK07337 237 TGWRLGWLVVPEALVGTFEKLAQNLFICASALAQHAALACFEPDT--LAIYERRRAEFKRRRDFIVPALESL-GFKVPVM 313 (388)
T ss_pred chhheeeeecCHHHHHHHHHHHHHhccCCChHHHHHHHHHhccCc--hHHHHHHHHHHHHHHHHHHHHHHhc-CCccccC
Confidence 999999999999999999888777777789999999999987532 3557888999999999999999997 7664 47
Q ss_pred CCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 386 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 386 p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|++|+|+|++++.... ....++.+|+.+|++++||.|
T Consensus 314 p~~g~f~~~~~~~~~~------~~~~~~~~~~~~ll~~~gv~v 350 (388)
T PRK07337 314 PDGAFYVYADCRGVAH------PAAGDSAALTQAMLHDAGVVL 350 (388)
T ss_pred CCeeEEEEEecccccC------CCCCCHHHHHHHHHHhCCEEE
Confidence 8999999999975210 011367899999998889986
No 23
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=5.8e-51 Score=409.37 Aligned_cols=334 Identities=22% Similarity=0.403 Sum_probs=284.7
Q ss_pred HHHHHHHHhc--CCCeEEcCCCCCC----CCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCC
Q 014172 84 TDQATALAQA--GVSVIRLAAGEPD----FDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLSYTPD 156 (429)
Q Consensus 84 ~~~~~~~~~~--g~~~i~L~~g~~~----~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~ 156 (429)
...+..+... |+++|+|+.|+|+ +++|+++.+++.+++..+ ...|++..|.++||+++++++.+.+|.+++++
T Consensus 39 ~~~~~~~~~~~~~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~ 118 (430)
T PLN00145 39 NRVKACVDAGGGPRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTD 118 (430)
T ss_pred HHHHHhhhcccCCCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChh
Confidence 3444444333 7789999999985 777899999999988764 45799889999999999999999899889999
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcC
Q 014172 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS 236 (429)
Q Consensus 157 ~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~ 236 (429)
+|++|+|++++|.+++.+++++||+|++++|+|+.|...+...|++++.+++.++++|.+|++.+++.++++++++++++
T Consensus 119 ~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~ 198 (430)
T PLN00145 119 DIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENTVAMVIIN 198 (430)
T ss_pred hEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcCceEEEEeC
Confidence 99999999999999999999999999999999999999999999999999987777899999999999999999999999
Q ss_pred CCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEc
Q 014172 237 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG 316 (429)
Q Consensus 237 p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~ 316 (429)
||||||.+++.+++++|+++|++| +++||+||+|.++.|++....++..+.. .+++|+++||||.|+++|||+||+++
T Consensus 199 P~NPtG~v~~~~~l~~i~~~a~~~-~i~ii~De~Y~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~~pG~RlG~iv~ 276 (430)
T PLN00145 199 PNNPCGSVYSYEHLAKIAETARKL-GILVIADEVYDHLTFGSKPFVPMGVFGE-VAPVLTLGSISKRWVVPGWRLGWIAT 276 (430)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHc-CCEEEEeccchhhccCCCCccchhhhcc-cCcEEEEeccccccCCCCeeEEEEEE
Confidence 999999999999999999999999 9999999999999987655556655554 57899999999999999999999997
Q ss_pred --CHHHHH------HHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCcee-ecCC
Q 014172 317 --PKHFVA------ACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM-SEPQ 387 (429)
Q Consensus 317 --~~~~~~------~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~-~~p~ 387 (429)
++.+++ .+.... ....+++.+.|.++..+|... .++++++.++.++++|+.+.+.|++++|+.+ ..|+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Q~a~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ 353 (430)
T PLN00145 277 CDPNGILKETKVVDSIRNYL-NISTDPATFVQGAIPQIIANT--KEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPE 353 (430)
T ss_pred ecchhhhhhhHHHHHHHHHh-cccCCCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCC
Confidence 444433 333332 334467899999999999852 2678999999999999999999999888876 4799
Q ss_pred ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 388 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|+||+|++++.... ....++.+|+.+|++++||.+
T Consensus 354 ga~y~~v~l~~~~~------~~~~~~~~~~~~ll~~~gV~v 388 (430)
T PLN00145 354 GSMFVMVKLDLSCL------SGIKDDMDFCCKLAKEESVVV 388 (430)
T ss_pred eeeEEEeccChhhc------CCCCCHHHHHHHHHHhCCEEE
Confidence 99999999973100 011257889999999989976
No 24
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=1.2e-50 Score=402.51 Aligned_cols=319 Identities=27% Similarity=0.513 Sum_probs=282.4
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCC-CcEEEecChHHHHHHHH
Q 014172 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTP-DQILVSNGAKQSILQAV 172 (429)
Q Consensus 94 g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-~~i~~t~G~~~al~~~l 172 (429)
++++|+|+.|+|++++++.+.+++.+.+.....+|++..|.++||+++++++++.+|.++++ ++|++|+|+++++..++
T Consensus 28 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~ 107 (384)
T PRK12414 28 QHDALNLSQGAPNFAPDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAI 107 (384)
T ss_pred hCCeEEcCCCCCCCCCCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHH
Confidence 35699999999999989999999998877666789999999999999999999999987766 68999999999999999
Q ss_pred HHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHH
Q 014172 173 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 252 (429)
Q Consensus 173 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~ 252 (429)
++++++||+|++++|+|..|...++..|++++.++++. +++.+|++.+++.+++++++|++++||||||.+++.+++++
T Consensus 108 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~~~~~~ 186 (384)
T PRK12414 108 SALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSP-EDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSAADLAR 186 (384)
T ss_pred HHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCc-cccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCHHHHHH
Confidence 99999999999999999999999999999999999864 35789999999999889999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhccc
Q 014172 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFT 332 (429)
Q Consensus 253 I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~ 332 (429)
|+++|++| +++||+||+|.++.|++....++..++...+++|+++||||.||++|+|+||+++++++++.+.+......
T Consensus 187 i~~~a~~~-~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~l~~~l~~~~~~~~ 265 (384)
T PRK12414 187 LAQLTRNT-DIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAELMDEIRKVHQFMV 265 (384)
T ss_pred HHHHHHHC-CeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCHHHHHHHHHHHhhee
Confidence 99999999 99999999999999876544455555544578999999999999999999999999999999988877667
Q ss_pred CCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCC
Q 014172 333 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN 412 (429)
Q Consensus 333 ~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~ 412 (429)
.+++.+.|.++..+|.. ..+..+.++.|+++|+.+.+.|++. |+++.+|+||||+|++++.... .+
T Consensus 266 ~~~s~~~q~a~~~~l~~----~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~gg~~~~~~~~~~~~---------~~ 331 (384)
T PRK12414 266 FSADTPMQHAFAEALAE----PASYLGLGAFYQRKRDLLARELAGS-RFELLPSEGSFFMLARFRHFSD---------ES 331 (384)
T ss_pred cCCCcHHHHHHHHHhcC----ChHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCcceEEEEcccccCC---------CC
Confidence 78899999999999976 2334467889999999999999998 8888899999999999875211 25
Q ss_pred hHHHHHHHHHhCCeec
Q 014172 413 SESLCRYLLDKAQVLL 428 (429)
Q Consensus 413 ~~~~~~~Ll~~~gV~v 428 (429)
+.+++.++++++||.|
T Consensus 332 ~~~~~~~~l~~~gV~v 347 (384)
T PRK12414 332 DSDFVLRLIRDARVAT 347 (384)
T ss_pred HHHHHHHHHHhCCEEE
Confidence 6788888888889976
No 25
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=8.2e-51 Score=405.23 Aligned_cols=337 Identities=25% Similarity=0.451 Sum_probs=292.0
Q ss_pred cccccCCchhHHHHHHHHHHH-hcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhc
Q 014172 71 RVNAVKPSKTVAITDQATALA-QAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEEN 149 (429)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~-~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~ 149 (429)
++..++.+.+.++.+.+.+.. .+|+++|+|+.|+|++++|+.+.+++.+.+. ....|++..|.++||+++|+++++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~ 81 (393)
T TIGR03538 3 NLSRLQPYPFEKLAALLAGVTPPASKPPIALSIGEPKHPTPAFVLEALRENLH-GLSTYPTTKGLPELRQAIARWLERRF 81 (393)
T ss_pred hhhhCCccHHHHHHHHHHhhhhhcCCCeEEecCCCCCCCCCHHHHHHHHHHhh-ccCCCCCCCCCHHHHHHHHHHHHHhh
Confidence 455566677777777776654 3678999999999999999999999998765 46789999999999999999999988
Q ss_pred CCC--CCCC-cEEEecChHHHHHHHHHHhcCCCCE--EEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhh
Q 014172 150 GLS--YTPD-QILVSNGAKQSILQAVLAVCSPGDE--VIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESK 224 (429)
Q Consensus 150 g~~--~~~~-~i~~t~G~~~al~~~l~~l~~~gd~--Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~ 224 (429)
|++ ++++ +|++|+|+++++.+++++++++||. |++++|+|..|...++..|++++.++++++++|.+|++++++.
T Consensus 82 ~~~~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 161 (393)
T TIGR03538 82 DLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPES 161 (393)
T ss_pred CCcccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHH
Confidence 876 6785 8999999999999999999999986 9999999999999999999999999998777789999999998
Q ss_pred cccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCC-CCCccc-c---CC-CCCCceEEEe
Q 014172 225 LTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA-THTSFA-S---LP-GMWERTLTVN 298 (429)
Q Consensus 225 l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~-~~~~~~-~---~~-~~~~~~i~~~ 298 (429)
+.+++|+|++++||||||.+++.+++++|+++|++| +++||+||+|.++.|++. ...+.. . .. ...+++|+++
T Consensus 162 ~~~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~-~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~ 240 (393)
T TIGR03538 162 VWRRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQY-GFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFH 240 (393)
T ss_pred HhhcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHC-CEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEe
Confidence 877899999999999999999999999999999999 999999999999888642 222221 1 11 1257899999
Q ss_pred ccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC
Q 014172 299 GFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL 378 (429)
Q Consensus 299 S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l 378 (429)
||||.|+++|+|+||+++++++++.+.+.......+++.+.|.++...+.. ++++++.++.|+++++.+.+.|+++
T Consensus 241 S~SK~~~~~GlRvG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~L~~~ 316 (393)
T TIGR03538 241 SLSKRSNLPGLRSGFVAGDAEILKAFLRYRTYHGCAMPIPTQLASIAAWND----EQHVRENRALYREKFAAVLEILGQV 316 (393)
T ss_pred cchhhcCCcccceEEEecCHHHHHHHHHHHHhhccCcCHHHHHHHHHHhcC----hHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999998877666667889999998888864 6789999999999999999999875
Q ss_pred CCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 379 EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 379 ~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.+..|++|+|+|++++ . ++.+++++|++++||.|
T Consensus 317 --~~~~~p~gg~f~~~~~~-~------------~~~~~~~~l~~~~gV~v 351 (393)
T TIGR03538 317 --LDLELPDAGFYLWPKVP-G------------DDEAFARALYEEENVTV 351 (393)
T ss_pred --CcccCCCeeEEEEEECC-C------------CHHHHHHHHHHHCCEEE
Confidence 45668999999999997 2 57889999998889986
No 26
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=1.3e-50 Score=401.78 Aligned_cols=318 Identities=45% Similarity=0.735 Sum_probs=284.3
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCC-cEEEecChHHHHHHHHH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPD-QILVSNGAKQSILQAVL 173 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~-~i~~t~G~~~al~~~l~ 173 (429)
+++|+|+.|+|++++++.+.+++.+.+.....+|++..|.++||+++++++.+.+|+.++++ +|++|+|+++++.++++
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~ 99 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMR 99 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence 46899999999998888888988888766667898889999999999999999989888886 89999999999999999
Q ss_pred HhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHH
Q 014172 174 AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEI 253 (429)
Q Consensus 174 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I 253 (429)
+++++||+|++++|+|+.|...++..|++++.++++.++++.+|++.+++++.++++++++++||||||.+++.+++++|
T Consensus 100 ~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~~~~~l 179 (378)
T PRK07682 100 AIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSELEEI 179 (378)
T ss_pred HhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHHHHHHH
Confidence 99999999999999999999999999999999998766678899999999998899999999999999999999999999
Q ss_pred HHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccC
Q 014172 254 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS 333 (429)
Q Consensus 254 ~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~ 333 (429)
+++|++| +++||+||+|.++.|++. ..++..+....+++++++||||.|+++|+|+||+++++++++.+.........
T Consensus 180 ~~~~~~~-~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~i~~l~~~~~~~~~ 257 (378)
T PRK07682 180 AVIVEKH-DLIVLSDEIYAELTYDEA-YTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVYFSEAMLKIHQYSMM 257 (378)
T ss_pred HHHHHHc-CcEEEEehhhhhcccCCC-CCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHHHHHHHHHHHHhhcc
Confidence 9999999 999999999999998753 33455555445789999999999999999999999999999999887665566
Q ss_pred CCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCCh
Q 014172 334 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 413 (429)
Q Consensus 334 ~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~ 413 (429)
+++.+.|.++..+|+. .+.+++++++.|+++|+.+.+.|+++ |+++..|+|+||+|++++.. + .++
T Consensus 258 ~~~~~~q~a~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~g~~~~~~~~~~~-~---------~~~ 323 (378)
T PRK07682 258 CAPTMAQFAALEALRA---GNDDVIRMRDSYRKRRNFFVTSFNEI-GLTCHVPGGAFYAFPSISST-G---------LSS 323 (378)
T ss_pred CCCHHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHHHC-CCccCCCCeeEEEEEeccCC-C---------CCH
Confidence 7889999999999986 45678899999999999999999998 88888999999999998531 0 268
Q ss_pred HHHHHHHHHhCCeec
Q 014172 414 ESLCRYLLDKAQVLL 428 (429)
Q Consensus 414 ~~~~~~Ll~~~gV~v 428 (429)
.+++++|++++||.|
T Consensus 324 ~~~~~~ll~~~gv~v 338 (378)
T PRK07682 324 EEFAEQLLLEEKVAV 338 (378)
T ss_pred HHHHHHHHHhCCEEE
Confidence 899999998779986
No 27
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-50 Score=400.93 Aligned_cols=340 Identities=33% Similarity=0.528 Sum_probs=296.2
Q ss_pred ccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhc
Q 014172 70 PRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEEN 149 (429)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~ 149 (429)
+++.++.++.+.++...+. ..+++|+|+.|+|++++|+.+.+++.+.+.+....|++..|.++||+++++++.+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~----~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~ 78 (382)
T PRK06108 3 PAARALPESGIREVANAGR----GREGVLPLWFGESDLPTPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLH 78 (382)
T ss_pred hhhhhCCchHHHHHHHHHh----ccCCeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHh
Confidence 3444555555555544332 224689999999999999999999999887766679999999999999999999888
Q ss_pred CCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCC-CCCCCCHHHHHhhcccC
Q 014172 150 GLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRIS-ENFLLDPKVLESKLTEK 228 (429)
Q Consensus 150 g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~e~l~~~l~~~ 228 (429)
|..+++++|++|+|+++++..++.+++++||+|++++|+|..|...++..|++++.+|++.+ ++|.+|++.+++.++++
T Consensus 79 ~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~ 158 (382)
T PRK06108 79 GVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPR 158 (382)
T ss_pred CCCcCcceEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCcc
Confidence 98889999999999999999999999999999999999999999999999999999998753 46789999999999888
Q ss_pred CcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccC-CCCCCccccCCCCCCceEEEeccChhcccc
Q 014172 229 SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA-PATHTSFASLPGMWERTLTVNGFSKAFAMT 307 (429)
Q Consensus 229 ~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 307 (429)
++++++++||||||.+++.+++++|+++|++| +++||+||+|.++.|+ +...+++..+....+++++++||||.||++
T Consensus 159 ~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~-~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 237 (382)
T PRK06108 159 TRALFINSPNNPTGWTASRDDLRAILAHCRRH-GLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMT 237 (382)
T ss_pred ceEEEEECCCCCCCcccCHHHHHHHHHHHHHC-CcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCc
Confidence 99999999999999999999999999999999 9999999999999886 333445455544357899999999999999
Q ss_pred cceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCC
Q 014172 308 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 387 (429)
Q Consensus 308 G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~ 387 (429)
|+|+||+++++++++.+.+.......+++.+.|.++..+|.. ..+++++++++++++++.+.+.|++++|+++..|+
T Consensus 238 G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~ 314 (382)
T PRK06108 238 GWRLGWLVAPPALGQVLEKLIEYNTSCVAQFVQRAAVAALDE---GEDFVAELVARLRRSRDHLVDALRALPGVEVAKPD 314 (382)
T ss_pred ccceeeeeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCC
Confidence 999999999999999988776555677899999999999986 46788999999999999999999988889998999
Q ss_pred ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 388 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+|+|+|++++.. .++.+++++|++++||.|
T Consensus 315 ~g~~~~~~l~~~-----------~~~~~~~~~ll~~~gV~v 344 (382)
T PRK06108 315 GAMYAFFRIPGV-----------TDSLALAKRLVDEAGLGL 344 (382)
T ss_pred eeEEEEEeCCCC-----------CCHHHHHHHHHHhCCEEE
Confidence 999999999753 367899999998889986
No 28
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=1.5e-50 Score=402.36 Aligned_cols=341 Identities=28% Similarity=0.485 Sum_probs=298.4
Q ss_pred CcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHh
Q 014172 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 147 (429)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~ 147 (429)
+++++.++..+.+..+...+ ++.++|+|+.|.|++++++.+.+++.+.+......|++..|.++||+++++++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~-----~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~ 82 (386)
T PRK09082 8 PQSKLPNVGTTIFTVMSALA-----AEHGAINLSQGFPDFDGPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTAR 82 (386)
T ss_pred hhhHhhccCccHHHHHHHHH-----hhCCEEEecCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHH
Confidence 44556666666444443222 2346899999999998888999999988876667899999999999999999999
Q ss_pred hcCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 148 ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 148 ~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
.+|.+.+++ +|++|+|+++++..++.+++++||+|++++|+|..+...++..|++++.++++. .++.+|++++++.++
T Consensus 83 ~~~~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~ 161 (386)
T PRK09082 83 LYGRQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQP-PDFRVDWQRFAAAIS 161 (386)
T ss_pred HhCCCCCCCCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccccCCHHHHHHhcC
Confidence 889877775 899999999999999999999999999999999999999999999999999864 358899999999999
Q ss_pred cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccc
Q 014172 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (429)
Q Consensus 227 ~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 306 (429)
++++++++++||||||.+++.+++++|+++|++| ++++|+||+|.++.|++....++.++....+++++++||||.||+
T Consensus 162 ~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~-~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~ 240 (386)
T PRK09082 162 PRTRLIILNTPHNPSGTVWSAADMRALWQLIAGT-DIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHV 240 (386)
T ss_pred ccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHC-CEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccc
Confidence 8999999999999999999999999999999999 999999999999999765556676666556899999999999999
Q ss_pred ccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC
Q 014172 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (429)
Q Consensus 307 ~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p 386 (429)
+|+|+||+++++++++.+.+.......+++.+.|.++..++.. .+++++++++.|+++++.+.+.|++. |+++.+|
T Consensus 241 ~G~RiG~iv~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~ 316 (386)
T PRK09082 241 TGWKVGYCVAPAALSAEFRKVHQYNTFTVNTPAQLALADYLRA---EPEHYLELPAFYQAKRDRFRAALANS-RFKLLPC 316 (386)
T ss_pred hhhhhhhhhCCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCC
Confidence 9999999999999999999887767778999999999998874 36789999999999999999999986 8899899
Q ss_pred CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 387 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+||||+|+++++..+ .++.+|+++|++++||.+
T Consensus 317 ~g~~~~~~~~~~~~~---------~~~~~~~~~l~~~~~v~v 349 (386)
T PRK09082 317 EGTYFQLVDYSAISD---------LDDVEFCQWLTREHGVAA 349 (386)
T ss_pred CeeEEEEEeccccCC---------CCHHHHHHHHHHhCCEEE
Confidence 999999999974201 268899999998989986
No 29
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=2.7e-50 Score=403.32 Aligned_cols=338 Identities=26% Similarity=0.371 Sum_probs=282.1
Q ss_pred cccccccCC-chhHHHHHHHHHHHhc--CCCeEEcCCCCCCCCChHHHHHHHHHHHHc-----CCCCCCCCCCCHHHHHH
Q 014172 69 SPRVNAVKP-SKTVAITDQATALAQA--GVSVIRLAAGEPDFDTPVLIAEAGINAIRE-----GFTRYTPNAGTLELRSA 140 (429)
Q Consensus 69 s~~~~~~~~-~~~~~~~~~~~~~~~~--g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~-----~~~~Y~~~~G~~~lr~~ 140 (429)
+..+.+++. +.+.++..+.++.+.. ++++|+|+.|+|++++|+.+.+++.+++.+ ....|++..|.++||++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~a 84 (409)
T PRK07590 5 NENYLKLKAGYLFPEIARRVNAFREANPEAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREK 84 (409)
T ss_pred ccccCccCCcchHHHHHHHHHHHhhhcCCCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHH
Confidence 333444443 4555666666666554 567999999999999999999999988764 34689999999999999
Q ss_pred HHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCE-----------EEEecCC
Q 014172 141 ICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADAT-----------PVILPTR 209 (429)
Q Consensus 141 ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~-----------~~~v~~~ 209 (429)
|++++.+.+|+.+++++|++|+|+++++.++ ..++++||+|++++|+|+.|...++..|.+ ++.++++
T Consensus 85 ia~~~~~~~g~~~~~~~I~it~Ga~~al~~l-~~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~ 163 (409)
T PRK07590 85 IAENDYQARGCDISADEIFISDGAKCDTGNI-LDIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCT 163 (409)
T ss_pred HHHHHHHhcCCcCChhhEEECCCHHHHHHHH-HHhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecc
Confidence 9999988899999999999999999999975 456789999999999999999999999997 8999987
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCC
Q 014172 210 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 289 (429)
Q Consensus 210 ~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~ 289 (429)
.++++.+|.+. +++|+|++|+||||||.+++.+++++|+++|++| +++||+||+|.++.+++..+.++..++.
T Consensus 164 ~~~~~~~d~~~------~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~-~~~iI~De~Y~~~~~~~~~~~~~~~~~~ 236 (409)
T PRK07590 164 AENNFVPELPE------EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKEN-GSLILFDAAYEAFISDPSLPHSIYEIEG 236 (409)
T ss_pred cccCCcccCcc------cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHc-CeEEEEEccchhhccCCCCCcchhhCCC
Confidence 66666666432 5789999999999999999999999999999999 9999999999999887654456666655
Q ss_pred CCCceEEEeccChhcccccceeeEEEcCHHHHHHH------------HHHhhcccCCCchHHHHHHHHHHhcCCCChHHH
Q 014172 290 MWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC------------NKIQSQFTSGASSISQKAGVAALGLGYAGGEVV 357 (429)
Q Consensus 290 ~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l------------~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~ 357 (429)
..+++|+++||||.||++|+|+||+++++++++.+ .........+++.+.|.++..++... ..+|+
T Consensus 237 ~~~~vi~~~SfSK~~~~pGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~--~~~~~ 314 (409)
T PRK07590 237 ARECAIEFRSFSKTAGFTGTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPE--GKAQI 314 (409)
T ss_pred cccceEEEecCccccCCcCceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCC--cHHHH
Confidence 45689999999999999999999999999988732 11122222357899999998888742 35789
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 358 SKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 358 ~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+++++.|+++|+.+.+.|+++ |+++..|++++|+|++++.. .++.+++.+|++++||.+
T Consensus 315 ~~~~~~~~~~r~~l~~~L~~~-~~~~~~~~g~~f~wi~~~~~-----------~~~~~~~~~l~~~~gv~v 373 (409)
T PRK07590 315 KELIDYYMENAKIIREGLESA-GFEVYGGVNAPYIWVKTPDG-----------MSSWDFFDKLLQEANVVG 373 (409)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-CCceecCCcceEEEEECCCC-----------CCHHHHHHHHHHHCCEEE
Confidence 999999999999999999998 88888899999999999853 267899999998889976
No 30
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=3.1e-50 Score=400.32 Aligned_cols=341 Identities=26% Similarity=0.492 Sum_probs=295.8
Q ss_pred cccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhh
Q 014172 69 SPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEE 148 (429)
Q Consensus 69 s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~ 148 (429)
++++.+++++.+..+..... ..++|+|+.|.|+.+.|+.+.+++.+.+.....+|++..|.++||+++++++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~-----~~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~ 79 (387)
T PRK08912 5 NPVFADLPTTIFEVMSQLAR-----EHGAINLGQGFPDDPGPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARF 79 (387)
T ss_pred hHHHhhCCCCHHHHHHHHHh-----hCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHH
Confidence 46666777776555544332 2468999999999888888999888877666678999999999999999999988
Q ss_pred cCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc
Q 014172 149 NGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 227 (429)
Q Consensus 149 ~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~ 227 (429)
+|+.++++ +|++|+|+++++.+++.+++++||+|++++|+|+.|...++..|++++.++++. +++.+|++.+++.+.+
T Consensus 80 ~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~ 158 (387)
T PRK08912 80 QGLDLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEP-PHWRLPRAALAAAFSP 158 (387)
T ss_pred hCCCCCCcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccCcCCHHHHHHHhCc
Confidence 89888998 999999999999999999999999999999999999999999999999999864 3578999999999988
Q ss_pred CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccc
Q 014172 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 307 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 307 (429)
+++++++++||||||.+++.+++++|+++|++| +++||+||+|.++.|++....++..+.+..+++++++||||.||++
T Consensus 159 ~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 237 (387)
T PRK08912 159 RTKAVLLNNPLNPAGKVFPREELALLAEFCQRH-DAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLT 237 (387)
T ss_pred cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHC-CeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCc
Confidence 999999999999999999999999999999999 9999999999999887654555655554457899999999999999
Q ss_pred cceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCC
Q 014172 308 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 387 (429)
Q Consensus 308 G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~ 387 (429)
|+|+||+++++++++.+.........+.+...|.++..++.. .++++++.++.++++++.+.+.|+++ |+++.+|+
T Consensus 238 GlRiG~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 313 (387)
T PRK08912 238 GWKVGFVCAAPPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGK---PDDYFEGMRADLARSRDRLAAGLRRI-GFPVLPSQ 313 (387)
T ss_pred CceeEEEecCHHHHHHHHHHHhhccccCChHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCC
Confidence 999999999999999998877666666777788888888864 46788999999999999999999998 88888999
Q ss_pred ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 388 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|+||+|++++... ...++.+++++|++++||.|
T Consensus 314 g~~~l~~~l~~~~--------~~~~~~~~~~~l~~~~gV~v 346 (387)
T PRK08912 314 GTYFLTVDLAPLG--------LAEDDVAFCRRLVEEAGVAA 346 (387)
T ss_pred cceEEEecccccC--------CCCCHHHHHHHHHhcCCEEE
Confidence 9999999997520 01368899999998889976
No 31
>PLN02187 rooty/superroot1
Probab=100.00 E-value=2.7e-50 Score=407.23 Aligned_cols=355 Identities=20% Similarity=0.363 Sum_probs=289.6
Q ss_pred ccccCcccccccCCchhHHHHHHH-HHH-HhcCCCeEEcCCCCCC----CCChHHHHHHHHHHHHcC-CCCCCCCCCCHH
Q 014172 64 VDVSLSPRVNAVKPSKTVAITDQA-TAL-AQAGVSVIRLAAGEPD----FDTPVLIAEAGINAIREG-FTRYTPNAGTLE 136 (429)
Q Consensus 64 ~~~~~s~~~~~~~~~~~~~~~~~~-~~~-~~~g~~~i~L~~g~~~----~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~ 136 (429)
|.+.-++.+..-....++.+.... ... +..++++|+|+.|+|+ +.+|+++.+++.++++.+ ...|++..|.++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~ 112 (462)
T PLN02187 33 WRFGGSDKAAKASTVTLRGVIYMLFDNCGKDVNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILP 112 (462)
T ss_pred cccCcchhhhhhhhchHhhHHHHHHhhcccCCCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHH
Confidence 544444444433323333333222 222 2346689999999988 566789999999988754 367999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCC
Q 014172 137 LRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLL 216 (429)
Q Consensus 137 lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 216 (429)
||++||+++.+.+|..+++++|++|+|++++|.+++.++++|||+|++++|+|+.|...++..|++++.+++.++++|.+
T Consensus 113 lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~ 192 (462)
T PLN02187 113 ARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEI 192 (462)
T ss_pred HHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCcc
Confidence 99999999998889889999999999999999999999999999999999999999999999999999999876678999
Q ss_pred CHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEE
Q 014172 217 DPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLT 296 (429)
Q Consensus 217 d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~ 296 (429)
|++.++++++++++++++++||||||.+++.+++++|+++|++| +++||+||+|.++.|++..+.++..+.. ..++|+
T Consensus 193 d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~-~i~iI~DE~Y~~l~f~~~~~~s~~~~~~-~~~vi~ 270 (462)
T PLN02187 193 DLEGIEAIADENTVAMVVINPNNPCGNVYSHDHLKKVAETARKL-GIMVISDEVYDRTIFGDNPFVSMGKFAS-IVPVLT 270 (462)
T ss_pred CHHHHHHhcCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHC-CCEEEEeccccccccCCCCceeHHHhcc-CCcEEE
Confidence 99999999988999999999999999999999999999999999 9999999999999997655555655544 257999
Q ss_pred EeccChhcccccceeeEEEcC-H-H---HHHHHHHHhhcccC--CCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Q 014172 297 VNGFSKAFAMTGWRLGYIAGP-K-H---FVAACNKIQSQFTS--GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRD 369 (429)
Q Consensus 297 ~~S~SK~~~~~G~R~G~v~~~-~-~---~~~~l~~~~~~~~~--~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~ 369 (429)
++||||.|+++|||+||++++ + . +++.+......+.. +++.+.|.++.++|+.. ..+|++++++.|+++|+
T Consensus 271 l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~--~~~~l~~~~~~l~~~r~ 348 (462)
T PLN02187 271 LAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKA--DKNFFAKKNKILKHNVD 348 (462)
T ss_pred EecchhhcCCccceeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHH
Confidence 999999999999999999983 3 3 33456565555443 56899999999999752 36899999999999999
Q ss_pred HHHHHhccCCCce-eecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 370 FLVKSFGELEGVK-MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 370 ~l~~~L~~l~g~~-~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+.+.|++++++. +..|+||+|+|++++.... .++.++.+++.+|+++.||.|
T Consensus 349 ~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~~------~~~~~~~~~~~~ll~~~gV~v 402 (462)
T PLN02187 349 LVCDRLKDIPCVVCPKKPESCTYLLTKLELSLM------DNIKDDIDFCVKLAREENLVF 402 (462)
T ss_pred HHHHHHhhCCCCcCCCCCCEeEEEEeecChhhC------CCCCCHHHHHHHHHhhCCEEE
Confidence 9999999986554 3479999999998863100 011256789999988889976
No 32
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.3e-50 Score=399.12 Aligned_cols=343 Identities=38% Similarity=0.633 Sum_probs=298.6
Q ss_pred CcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHh
Q 014172 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 147 (429)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~ 147 (429)
++.++.......+..+.+..+ ...++|+|+.|+|++++|+.+.+++.+++......|++..|.++||+++++++.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~----~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~ 85 (391)
T PRK08361 10 IAGRINLIQRSKIRELFERAS----KMENVISLGIGEPDFDTPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKK 85 (391)
T ss_pred hhHHHHhCCccHHHHHHHHHH----hhcCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHH
Confidence 466666666665555544332 2246899999999998899999999998876667898999999999999999998
Q ss_pred hcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc
Q 014172 148 ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 227 (429)
Q Consensus 148 ~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~ 227 (429)
.+|..+++++|++|+|+++++.+++.+++++||+|++++|+|..+...++..|++++.++++.+++|.+|++.+++.+++
T Consensus 86 ~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 165 (391)
T PRK08361 86 FYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITK 165 (391)
T ss_pred HhCCCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhccc
Confidence 88888899999999999999999999999999999999999999999999999999999998777788999999999998
Q ss_pred CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccc
Q 014172 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 307 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 307 (429)
+++++++++||||||.+++.+++++|+++|+++ +++||+||+|.++.|++....++..+. .+++++++||||.||++
T Consensus 166 ~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~--~~~~i~~~s~SK~~~~~ 242 (391)
T PRK08361 166 RTRMIVINYPNNPTGATLDKEVAKAIADIAEDY-NIYILSDEPYEHFLYEGAKHYPMIKYA--PDNTILANSFSKTFAMT 242 (391)
T ss_pred ccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHc-CeEEEEEcccccceeCCCCCCCHhhcC--CCCEEEEecCchhcCCc
Confidence 999999999999999999999999999999999 999999999999988654444554442 46899999999999999
Q ss_pred cceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCC
Q 014172 308 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 387 (429)
Q Consensus 308 G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~ 387 (429)
|+|+||+++++++++.+.+.......+++.+.|.++..+|.++.. .+++++.++.++++++.+.+.|++++|+++..|+
T Consensus 243 GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~ 321 (391)
T PRK08361 243 GWRLGFVIAPEQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKES-WKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPK 321 (391)
T ss_pred HhhhhhhccCHHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcc-cHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCC
Confidence 999999999999999988776655667889999999999986432 3578999999999999999999998889999999
Q ss_pred ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 388 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
||||+|++++.. + .++.+++++|++++||.|
T Consensus 322 g~~~~~~~l~~~-~---------~~~~~l~~~l~~~~gv~v 352 (391)
T PRK08361 322 GAFYVFANIDET-G---------MSSEDFAEWLLEKARVVV 352 (391)
T ss_pred EEEEEEEECCCC-C---------CCHHHHHHHHHHhCCEEE
Confidence 999999999742 0 268899999988889986
No 33
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7e-50 Score=398.78 Aligned_cols=353 Identities=51% Similarity=0.815 Sum_probs=313.4
Q ss_pred ccCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHH
Q 014172 66 VSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKL 145 (429)
Q Consensus 66 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l 145 (429)
|++|+++.++.++.+.++...+.++...+.++|+|+.|+|++++++.+.+++.+.+.+....|++..|..+||+++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~ 81 (393)
T PRK05764 2 MKLSKRVSRVTPSATLAVTAKAKELKAQGRDVISLGAGEPDFDTPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKL 81 (393)
T ss_pred cchhhhhhhcCchHHHHHHHHHHHHHhccCCEEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHH
Confidence 34799999999999988888888777778899999999999998899999999888766678999999999999999999
Q ss_pred HhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhc
Q 014172 146 KEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL 225 (429)
Q Consensus 146 ~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l 225 (429)
.+.+|..+++++|++|+|+++++..++.+++++||.|++++|+|..|..+++..|++++.+++++++++.+|++.+++.+
T Consensus 82 ~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 161 (393)
T PRK05764 82 KRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAI 161 (393)
T ss_pred HHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhh
Confidence 99888878899999999999999999999999999999999999999999999999999999986677889999999999
Q ss_pred ccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccC-CCCCCceEEEeccChhc
Q 014172 226 TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL-PGMWERTLTVNGFSKAF 304 (429)
Q Consensus 226 ~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~-~~~~~~~i~~~S~SK~~ 304 (429)
+++++++++++|+||||.+++.+++++|+++|++| ++++|+||+|.++.|++....++..+ ....+++++++||||.+
T Consensus 162 ~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~ 240 (393)
T PRK05764 162 TPKTKALILNSPSNPTGAVYSPEELEAIADVAVEH-DIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAY 240 (393)
T ss_pred CccceEEEEECCCCCCCcccCHHHHHHHHHHHHHC-CcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccc
Confidence 88899999999999999999999999999999999 99999999999998866444455554 33457899999999999
Q ss_pred ccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceee
Q 014172 305 AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (429)
Q Consensus 305 ~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~ 384 (429)
+++|+|+||+++++++++.+.........+++.+.|.++..+|+. ..++++++++.++++++.+.+.|++++|+.+.
T Consensus 241 ~~~G~RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 317 (393)
T PRK05764 241 AMTGWRLGYAAGPKELIKAMSKLQSHSTSNPTSIAQYAAVAALNG---PQDEVEEMRQAFEERRDLMVDGLNEIPGLECP 317 (393)
T ss_pred cCccceeEEEecCHHHHHHHHHHHhhcccCCChHHHHHHHHHHcC---ChHHHHHHHHHHHHHHHHHHHHHhhCCCCccc
Confidence 999999999999999999998887777778899999999999974 36888999999999999999999998889988
Q ss_pred cCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 385 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 385 ~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+|+|++|+|++++..... .+ .++.+++++|++++||.+
T Consensus 318 ~~~g~~~~~~~~~~~~~~--~~----~~~~~~~~~l~~~~gi~v 355 (393)
T PRK05764 318 KPEGAFYVFPNVSKLLGK--SI----TDSLEFAEALLEEAGVAV 355 (393)
T ss_pred CCCcceEEEEeccccccc--cc----CCHHHHHHHHHHhCCEEE
Confidence 999999999999753110 00 135899999998889986
No 34
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-49 Score=395.92 Aligned_cols=345 Identities=25% Similarity=0.395 Sum_probs=303.8
Q ss_pred CcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHH
Q 014172 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLK 146 (429)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~ 146 (429)
+++|+..+.++.+.++.+.+.+....+.+.|+|+.|+|++.+++.+.+++.+.+.. ....|++..|.++||+++++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~ 81 (386)
T PRK07550 2 LNPLIAALFPPPIPEVRAWLAGYDGADGPLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYS 81 (386)
T ss_pred cchhhhhcCChHHHHHHHHHHHHhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHH
Confidence 56777777888888888888888778888999999999988888999998887653 34679888999999999999999
Q ss_pred hhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 147 EENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 147 ~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
+.+|..+++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|++++.+++++++++.+|++.++++++
T Consensus 82 ~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~ 161 (386)
T PRK07550 82 RLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALIT 161 (386)
T ss_pred HHhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhc
Confidence 99998889999999999999999999999999999999999999999999999999999999866778899999999999
Q ss_pred cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccc
Q 014172 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (429)
Q Consensus 227 ~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 306 (429)
++++++++++||||||.+++.+++++|+++|++| +++||+||+|.++.+++....++.......+++++++||||.+|+
T Consensus 162 ~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~-~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~ 240 (386)
T PRK07550 162 PRTRAIALVTPNNPTGVVYPPELLHELYDLARRH-GIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYAL 240 (386)
T ss_pred ccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHc-CeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccC
Confidence 8999999999999999999999999999999999 999999999999876543333333322235689999999999999
Q ss_pred ccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC
Q 014172 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (429)
Q Consensus 307 ~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p 386 (429)
+|+|+||+++++++++.+.+.......+++.++|.++..++.. .++|+++.++.++++++.+.+.|.+++++.+ .+
T Consensus 241 ~G~RiG~i~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~ 316 (386)
T PRK07550 241 TGHRVGAVVASPARIAEIEKFMDTVAICAPRIGQIAVAWGLPN---LADWRAGNRAEIARRRDAFRAVFARLPGWEL-LA 316 (386)
T ss_pred cccceEeeecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHHhCCCcee-CC
Confidence 9999999999999999998887777778899999999999975 4788899999999999999999998766655 47
Q ss_pred CceEEEEEecCC-ccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 387 QGAFYLFIDFST-YYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 387 ~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+++|+|++++. . .++.+++++|++++||.|
T Consensus 317 ~g~~~~~~~~~~~~-----------~~~~~l~~~l~~~~gv~v 348 (386)
T PRK07550 317 SGAYFAYVRHPFPD-----------RPSREVARRLAKEAGILC 348 (386)
T ss_pred CceEEEEecCCCCC-----------CCHHHHHHHHHHhcCEEE
Confidence 799999999974 2 378899999998889976
No 35
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-49 Score=393.12 Aligned_cols=342 Identities=30% Similarity=0.537 Sum_probs=295.5
Q ss_pred ccCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHH
Q 014172 66 VSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHK 144 (429)
Q Consensus 66 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~ 144 (429)
|++++++..+.+..+..+.+... ...+.++|+.|+|++++|+.+.+++.+.+... ...|.+..|.+++|++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~ 77 (389)
T PRK05957 2 TQFTSRMDAVQSPIIPVVGQLIR----ENPGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQK 77 (389)
T ss_pred chhhHHHHhcCCcHHHHHHHHHH----hCCCeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHH
Confidence 34677777777665544433332 23568999999999999999999998877542 35799999999999999999
Q ss_pred HHhhcCCCCC-CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHh
Q 014172 145 LKEENGLSYT-PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLES 223 (429)
Q Consensus 145 l~~~~g~~~~-~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~ 223 (429)
+.+.+|.+++ +++|++|+|+++++..++.+++++||+|++++|+|..+...++..|++++.++.+ +++.+|++++++
T Consensus 78 l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~ 155 (389)
T PRK05957 78 LQQDNGIELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTD--DNYQLQPEAIEQ 155 (389)
T ss_pred HHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecC--CCCCcCHHHHHH
Confidence 9998898777 6799999999999999999999999999999999999999999999999999874 457799999999
Q ss_pred hcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChh
Q 014172 224 KLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKA 303 (429)
Q Consensus 224 ~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 303 (429)
++++++|+|++++||||||.+++.+++++|+++|++| |++||+||+|.++.|++....+...+....+++|+++||||.
T Consensus 156 ~i~~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~-~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 234 (389)
T PRK05957 156 AITPKTRAIVTISPNNPTGVVYPEALLRAVNQICAEH-GIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKA 234 (389)
T ss_pred hcCcCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHc-CcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhh
Confidence 9998999999999999999999999999999999999 999999999999988754333444444445789999999999
Q ss_pred cccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCc-e
Q 014172 304 FAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV-K 382 (429)
Q Consensus 304 ~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~-~ 382 (429)
||++|+|+||+++++++++.+.........+++.+.|.++..+|+. ..+++++.++.++++|+.+.+.|++++++ .
T Consensus 235 ~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~ 311 (389)
T PRK05957 235 YGFASWRIGYMVIPIHLLEAIKKIQDTILICPPVVSQYAALGALQV---GKSYCQQHLPEIAQVRQILLKSLGQLQDRCT 311 (389)
T ss_pred ccCccceeEEEecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 9999999999999999999999887777778899999999999986 45788888899999999999999988774 7
Q ss_pred eecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 383 MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 383 ~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.+|+||||+|++++.. .++.+++++|++++||.|
T Consensus 312 ~~~~~gg~~~~~~~~~~-----------~~~~~~~~~l~~~~gv~v 346 (389)
T PRK05957 312 LHPANGAFYCFLKVNTD-----------LNDFELVKQLIREYRVAV 346 (389)
T ss_pred ccCCCeeEEEEEeCCCC-----------CChHHHHHHHHHHCCEEE
Confidence 77899999999999743 378899999998789986
No 36
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=2e-49 Score=396.63 Aligned_cols=325 Identities=22% Similarity=0.398 Sum_probs=276.0
Q ss_pred cCCCeEEcCCCCCC----CCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHH
Q 014172 93 AGVSVIRLAAGEPD----FDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (429)
Q Consensus 93 ~g~~~i~L~~g~~~----~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~a 167 (429)
.++++|+|+.|+|+ +++|+.+.+++.+++... ..+|++..|.++||++|++++.+.+|..+++++|++|+|++++
T Consensus 30 ~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~a 109 (409)
T PLN00143 30 DHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHA 109 (409)
T ss_pred CCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHH
Confidence 56789999999998 899999999999988754 4679999999999999999999998988999999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCH
Q 014172 168 ILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPK 247 (429)
Q Consensus 168 l~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~ 247 (429)
+.+++++++++||.|++++|+|+.|...++..|++++.+++.++++|.+|++.++++++++++++++++||||||.+++.
T Consensus 110 l~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~nP~NPTG~~~s~ 189 (409)
T PLN00143 110 AEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAMVIINPGNPCGSVYSY 189 (409)
T ss_pred HHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCCEEEEEECCCCCCCCccCH
Confidence 99999999999999999999999999999999999999998766778899999999988889999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEc--CHHHH----
Q 014172 248 NLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG--PKHFV---- 321 (429)
Q Consensus 248 ~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~--~~~~~---- 321 (429)
+++++|+++|++| +++||+||+|.++.|++....++..+.. .+++|+++||||.|+++|+|+||+++ ++.++
T Consensus 190 ~~~~~l~~~a~~~-~~~ii~De~Y~~l~~~~~~~~~~~~~~~-~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~ 267 (409)
T PLN00143 190 EHLNKIAETARKL-GILVIADEVYGHIVFGSKPFVPMGLFAS-IVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICE 267 (409)
T ss_pred HHHHHHHHHHHHc-CCeEEEEccccccccCCCCCcchhhhcc-cCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHH
Confidence 9999999999999 9999999999999987644344444432 46899999999999999999999998 33343
Q ss_pred --HHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCce-eecCCceEEEEEecCC
Q 014172 322 --AACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFST 398 (429)
Q Consensus 322 --~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~-~~~p~~~~~~~~~l~~ 398 (429)
+.+.+.... ...++.+.|.++..+|+.+ ...++++.++.++++++.+.+.|+++++.. +..|+||||+|++++.
T Consensus 268 ~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~~ 344 (409)
T PLN00143 268 IADSIKKALNP-APFPPTFIQAAIPEILEKT--TEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLNL 344 (409)
T ss_pred HHHHHHHHHhc-cCCCCchHHHHHHHHHhcC--hHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecch
Confidence 333333322 2335789999999999752 267899999999999999999999885544 3478999999999974
Q ss_pred ccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 399 YYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
... .+..++.+++.+|+++.||.+
T Consensus 345 ~~~------~~~~~~~~~~~~ll~~~gV~v 368 (409)
T PLN00143 345 LLL------EDIEDDMEFCLKLAKEESLII 368 (409)
T ss_pred hhc------CCCCCHHHHHHHHHHhCCEEE
Confidence 200 011257889988988889986
No 37
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=1.7e-49 Score=397.36 Aligned_cols=326 Identities=22% Similarity=0.416 Sum_probs=282.1
Q ss_pred hcCCCeEEcCCCCCC----CCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHH
Q 014172 92 QAGVSVIRLAAGEPD----FDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (429)
Q Consensus 92 ~~g~~~i~L~~g~~~----~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~ 166 (429)
..|+++|+|+.|+|+ +++|+.+.+++.+++... ..+|++..|.++||+++++++.+.+|..+++++|++|+|+++
T Consensus 28 ~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 107 (409)
T PLN02656 28 ENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQ 107 (409)
T ss_pred ccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHH
Confidence 467899999999998 788999999999988754 568999999999999999999998898899999999999999
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCC
Q 014172 167 SILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYP 246 (429)
Q Consensus 167 al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~ 246 (429)
++.+++.+++++||+|++++|+|+.|...++..|++++.+++.++++|.+|++.+++.++++++++++++||||||.+++
T Consensus 108 al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~s 187 (409)
T PLN02656 108 AIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVALVIINPGNPCGNVYS 187 (409)
T ss_pred HHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceEEEEECCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999976667889999999999888999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcC--------H
Q 014172 247 KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP--------K 318 (429)
Q Consensus 247 ~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~--------~ 318 (429)
.+++++|+++|++| +++||+||+|.++.|++....++..+.. .+++|+++||||.|+++|+|+||++++ +
T Consensus 188 ~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~ 265 (409)
T PLN02656 188 YQHLKKIAETAEKL-KILVIADEVYGHLAFGSNPFVPMGVFGS-IVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDP 265 (409)
T ss_pred HHHHHHHHHHHHHc-CCEEEEehhhhhcccCCCCcccHHHhcc-cCcEEEEcccchhccCcceeEEEEEEeCcccccccH
Confidence 99999999999999 9999999999999997754445544433 478999999999999999999999984 5
Q ss_pred HHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCce-eecCCceEEEEEecC
Q 014172 319 HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFS 397 (429)
Q Consensus 319 ~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~-~~~p~~~~~~~~~l~ 397 (429)
++++.+.+.... ..+++.+.|.++..+|+.+ .++++++.++.++++|+.+.+.|++++++. +.+|+||||+|++++
T Consensus 266 ~~~~~~~~~~~~-~~~~s~~~q~a~~~~l~~~--~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~ 342 (409)
T PLN02656 266 KIVERIKKYFDI-LGGPATFIQAAVPTILEQT--DESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLN 342 (409)
T ss_pred HHHHHHHHHHhh-hcCCCHHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEEEEEecc
Confidence 788888776554 3467899999999999752 257899999999999999999999886554 357999999999997
Q ss_pred CccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 398 TYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.... ....++.+++.+++++.||.|
T Consensus 343 ~~~~------~~~~~~~~~~~~~l~~~gV~v 367 (409)
T PLN02656 343 LSLL------EDISDDIDFCFKLAREESVII 367 (409)
T ss_pred hhhc------CCCCCHHHHHHHHHHhCCEEE
Confidence 3200 001246678878888889986
No 38
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=3.6e-49 Score=392.42 Aligned_cols=340 Identities=37% Similarity=0.643 Sum_probs=296.9
Q ss_pred CcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHh
Q 014172 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 147 (429)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~ 147 (429)
+++++..+.++.+......+ ...+++|+|+.|.|++++++.+.+++.+.+......|++..|..+||+++++++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~----~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~ 80 (387)
T PRK07683 5 INPRVKDIQISGIRQFSNMV----QNYDNLISLTIGQPDFPTPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKD 80 (387)
T ss_pred hhHHHHhCCccHHHHHHHHH----HhcCCeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 46778777777665554443 23457899999999988888999999998876667898899999999999999998
Q ss_pred hcCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 148 ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 148 ~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
.+|+.++++ +|++|+|+++++.+++.+++++||+|++++|+|..|...++..|++++.++.+. +++.+|++.+++.++
T Consensus 81 ~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~~~~~ 159 (387)
T PRK07683 81 KYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRS-TGFRLTAEALENAIT 159 (387)
T ss_pred HhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCc-ccCCCCHHHHHHhcC
Confidence 889888898 999999999999999999999999999999999999999999999999999864 567889999999998
Q ss_pred cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccc
Q 014172 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (429)
Q Consensus 227 ~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 306 (429)
++++++++++||||||.+++.+++++|+++|+++ +++||+||+|.++.|++. ..++.++.+..+++++++||||.||+
T Consensus 160 ~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~-~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~vi~~~s~SK~~~~ 237 (387)
T PRK07683 160 EKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDK-NIFVLSDEIYSELVYEQP-HTSIAHFPEMREKTIVINGLSKSHSM 237 (387)
T ss_pred cCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHc-CeEEEEecccccceeCCC-cCChhhccCCcCCeEEEeeccccccC
Confidence 8999999999999999999999999999999999 999999999999988653 34556654446789999999999999
Q ss_pred ccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC
Q 014172 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (429)
Q Consensus 307 ~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p 386 (429)
+|+|+||+++++++++.+.+.......+++.+.|.++..+|.. ...+++..++.|+++++.+.+.|+++ |+.+.+|
T Consensus 238 pGlRiG~i~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~ 313 (387)
T PRK07683 238 TGWRIGFLFAPSYLAKHILKVHQYNVTCASSISQYAALEALTA---GKDDAKMMRHQYKKRRDYVYNRLISM-GLDVEKP 313 (387)
T ss_pred ccceeEEEEcCHHHHHHHHHHHHhccCCCChHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCC
Confidence 9999999999999999988776544566788999999999986 45678889999999999999999987 8888899
Q ss_pred CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 387 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+||||+|+.++.. + .++.+++.+|++++||.|
T Consensus 314 ~~~~~~~~~~~~~-~---------~~~~~~~~~ll~~~gI~v 345 (387)
T PRK07683 314 TGAFYLFPSIGHF-T---------MSSFDFALDLVEEAGLAV 345 (387)
T ss_pred CeeEEEEEecccC-C---------CCHHHHHHHHHHhCCEEE
Confidence 9999999998752 0 267789999888889976
No 39
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=2.6e-49 Score=395.07 Aligned_cols=345 Identities=33% Similarity=0.539 Sum_probs=292.4
Q ss_pred CcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCC---CCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHH
Q 014172 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP---DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHK 144 (429)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~---~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~ 144 (429)
+++++..++ +.+.++....++.+.+|.++|+|+.|.| ++++|+.+.+++.+.+......|++..|..+||++++++
T Consensus 4 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~ 82 (398)
T PRK08363 4 ASERAMGVE-YAIRDVVLPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKR 82 (398)
T ss_pred hhHHHHhcc-HHHHHHHHHHHHHHhcCCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHH
Confidence 445555554 3455666666666677889999999999 788889999999998876556798899999999999999
Q ss_pred HHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhh
Q 014172 145 LKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESK 224 (429)
Q Consensus 145 l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~ 224 (429)
+.+.+|+.+++++|++|+|+++++.+++.+++++||+|++++|+|..|...++..|++++.++...++++.+|++.+++.
T Consensus 83 ~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~ 162 (398)
T PRK08363 83 EKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKK 162 (398)
T ss_pred HHHhcCCCCChhhEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhh
Confidence 99989988999999999999999999999999999999999999999999999999999988433345678999999999
Q ss_pred cccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhc
Q 014172 225 LTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF 304 (429)
Q Consensus 225 l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 304 (429)
++++++++++++||||||.+++.+++++|+++|++| +++||+||+|.++.|.+. ..++.++.. ..++++++||||.|
T Consensus 163 ~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~-~~~li~Deay~~~~~~~~-~~~~~~~~~-~~~vi~~~SfSK~~ 239 (398)
T PRK08363 163 ITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEH-DLPVISDEIYDLMTYEGK-HVSPGSLTK-DVPVIVMNGLSKVY 239 (398)
T ss_pred CCcceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHc-CeEEEEhhhhhhhccCCc-ccCHHHcCc-CCcEEEEecchhcc
Confidence 988999999999999999999999999999999999 999999999999888653 334555543 46899999999999
Q ss_pred ccccceeeEEEc--CHHHHHHHHHHhhc---ccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC
Q 014172 305 AMTGWRLGYIAG--PKHFVAACNKIQSQ---FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE 379 (429)
Q Consensus 305 ~~~G~R~G~v~~--~~~~~~~l~~~~~~---~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~ 379 (429)
+++|+|+||+++ ++++++.+...... ...+++.+.|.++..+|.. ..+++++.++.++++|+.+.+.|.+++
T Consensus 240 ~~~GlRiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~---~~~~l~~~~~~~~~~~~~l~~~L~~~~ 316 (398)
T PRK08363 240 FATGWRLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTG---PMDYLEEYMKKLKERRDYIYKRLNEIP 316 (398)
T ss_pred CCccceEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999997 77777666544321 2356899999999999975 478999999999999999999999988
Q ss_pred CceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 380 GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 380 g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++.+..|+||||+|++++... ..++.+++.++++++||.|
T Consensus 317 ~~~~~~p~g~~~~~~~l~~~~---------~~~~~~~~~~~l~~~gV~v 356 (398)
T PRK08363 317 GISTTKPQGAFYIFPRIEEGP---------WKDDKEFVLDVLHEAHVLF 356 (398)
T ss_pred CCEecCCCeEEEEEEEeccCC---------CCCHHHHHHHHHHhCCEEE
Confidence 888889999999999997520 0256788888888889976
No 40
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=3.3e-49 Score=392.93 Aligned_cols=340 Identities=33% Similarity=0.580 Sum_probs=296.1
Q ss_pred ccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhc
Q 014172 70 PRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEEN 149 (429)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~ 149 (429)
++++.++++.+.++...+.+ .++|+|+.|.|+.+.|+.+.+++.+.+.....+|++..|.++||+++++++.+.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~-----~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~ 78 (387)
T PRK07777 4 SRLRPFGTTIFAEMSALAVR-----TGAVNLGQGFPDEDGPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRY 78 (387)
T ss_pred hhhhhcCccHHHHHHHHHhh-----CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHh
Confidence 45666777766666555532 3689999999998888888888888877666789988999999999999999989
Q ss_pred CCCCCCC-cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCC-CCCCCCHHHHHhhccc
Q 014172 150 GLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRIS-ENFLLDPKVLESKLTE 227 (429)
Q Consensus 150 g~~~~~~-~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~e~l~~~l~~ 227 (429)
|.+++++ +|++|+|+++++.+++.+++++||+|+++.|+|..|...++..|++++.++++++ ++|.+|++++++.+.+
T Consensus 79 g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~ 158 (387)
T PRK07777 79 GLEYDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTP 158 (387)
T ss_pred CCCCCCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCc
Confidence 9888786 7999999999999999999999999999999999999999999999999998765 4688999999999988
Q ss_pred CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccc
Q 014172 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 307 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 307 (429)
++++|++++||||||.+++.+++++|+++|++| ++++|+||+|.++.|++..+.++..+++..+++++++||||.||++
T Consensus 159 ~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~-~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 237 (387)
T PRK07777 159 RTRALIVNSPHNPTGTVLTAAELAAIAELAVEH-DLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVT 237 (387)
T ss_pred ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhc-CcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCc
Confidence 999999999999999999999999999999999 9999999999999987655555655554467899999999999999
Q ss_pred cceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCC
Q 014172 308 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 387 (429)
Q Consensus 308 G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~ 387 (429)
|+|+||+++++++++.+.........+.+.+.|.++..++.. .+.|++.+++.++++++.+.+.|+++ |+++.+|+
T Consensus 238 GlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~ 313 (387)
T PRK07777 238 GWKIGWACGPAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDH---EDAWVAALRDSLQAKRDRLAAGLAEA-GFEVHDSA 313 (387)
T ss_pred CceeEEEecCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhC---CcHHHHHHHHHHHHHHHHHHHHHHhC-CCCccCCC
Confidence 999999999999999988877656666788899888888876 46889999999999999999999997 88888999
Q ss_pred ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 388 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|+||+|++++.. + ..++.+|+++|++++||.|
T Consensus 314 g~~~~~~~~~~~-~--------~~~~~~~~~~l~~~~gv~v 345 (387)
T PRK07777 314 GTYFLCADPRPL-G--------YDDGTEFCRALPERVGVAA 345 (387)
T ss_pred cceEEEeccccc-C--------CCCHHHHHHHHHHhCCEEE
Confidence 999999998632 0 1267899999998889986
No 41
>PRK07324 transaminase; Validated
Probab=100.00 E-value=3.9e-50 Score=397.13 Aligned_cols=317 Identities=22% Similarity=0.295 Sum_probs=283.5
Q ss_pred HHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHH
Q 014172 87 ATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (429)
Q Consensus 87 ~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~ 166 (429)
+.++...+.++++|+.|+|++.+|+.+ +++.+++.+...+|++..|.++||++|++++. + +++++|++|+|+++
T Consensus 18 ~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~---~--~~~~~vi~t~G~~~ 91 (373)
T PRK07324 18 SATYDIAESCIDSLTLEELLALAGKNP-EAFYQELGQKKLTYGWIEGSPEFKEAVASLYQ---N--VKPENILQTNGATG 91 (373)
T ss_pred cCccccccCCCCCCcHHHHHhccCcch-HHHHHHHhcCCccCCCCCCCHHHHHHHHHHhc---C--CChhhEEEcCChHH
Confidence 334444677899999999999998888 88888888777899999999999999999984 2 57899999999999
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCC
Q 014172 167 SILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYP 246 (429)
Q Consensus 167 al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~ 246 (429)
++.+++.+++++||+|+++.|+|..+...++..|++++.+|++.+++|.+|++++++.+++++|++++++||||||.+++
T Consensus 92 al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~ 171 (373)
T PRK07324 92 ANFLVLYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMD 171 (373)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999987778889999999999899999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHH
Q 014172 247 KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK 326 (429)
Q Consensus 247 ~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~ 326 (429)
.+++++|+++|++| |++||+||+|.++.+++. ..++... .+++|+++||||.||++|+|+||+++++++++.+.+
T Consensus 172 ~~~l~~i~~~a~~~-~~~ii~De~y~~l~~~~~-~~s~~~~---~~~~I~~~s~SK~~~~~G~RiG~i~~~~~li~~~~~ 246 (373)
T PRK07324 172 RAYLEEIVEIARSV-DAYVLSDEVYRPLDEDGS-TPSIADL---YEKGISTNSMSKTYSLPGIRVGWIAANEEVIDILRK 246 (373)
T ss_pred HHHHHHHHHHHHHC-CCEEEEEccccccccCCC-CCChhhc---cCCEEEEecchhhcCCccceeEEEecCHHHHHHHHH
Confidence 99999999999999 999999999999888643 3344333 478899999999999999999999999999999999
Q ss_pred HhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccC
Q 014172 327 IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEG 406 (429)
Q Consensus 327 ~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~ 406 (429)
.+.....+++.++|.++..+|+. .+.+++++++.++++++.+.+.|++.+++.+..|++|+|+|+.++..
T Consensus 247 ~~~~~~~~~~~~~q~~a~~~l~~---~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~~~~------- 316 (373)
T PRK07324 247 YRDYTMICAGVFDDMLASLALEH---RDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDVD------- 316 (373)
T ss_pred HhCcEEecCChHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEeCCC-------
Confidence 88777778899999999998875 46788999999999999999999988788999999999999988742
Q ss_pred CCCCCChHHHHHHHHHhCCeec
Q 014172 407 FGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 407 ~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.++.+|+++|++++||.|
T Consensus 317 ----~~~~~~~~~ll~~~gv~v 334 (373)
T PRK07324 317 ----MPSEDFCLKLLKETGVLL 334 (373)
T ss_pred ----CCHHHHHHHHHHhcCEEE
Confidence 378899999998889976
No 42
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=5.2e-49 Score=391.76 Aligned_cols=342 Identities=33% Similarity=0.571 Sum_probs=291.7
Q ss_pred ccCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHH
Q 014172 66 VSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKL 145 (429)
Q Consensus 66 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l 145 (429)
..+++++..........+.+.. ...+++|+|+.|+|++.+|+.+.+++.+.+......|++..|.++||+++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~ 80 (391)
T PRK07309 5 KRFNKQLDKIEVSLIRQFDQSI----SDIPGILKLTLGEPDFTTPDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFV 80 (391)
T ss_pred hHHHhhhhhcCccHHHHHHHHH----HhcCCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHH
Confidence 3456777776666554444322 222569999999999998999999999888765667999999999999999999
Q ss_pred HhhcCCCCCC-CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhh
Q 014172 146 KEENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESK 224 (429)
Q Consensus 146 ~~~~g~~~~~-~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~ 224 (429)
.+.+|+.+.+ ++|++|+|+++++.+++++++++||+|++++|+|..|...++..|++++.++.+. +++.+|++.++++
T Consensus 81 ~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~ 159 (391)
T PRK07309 81 KEKYNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTE-NDFVLTPEMLEKA 159 (391)
T ss_pred HHHhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCC-cCCcCCHHHHHHH
Confidence 9888987775 7999999999999999999999999999999999999999999999999999753 4578999999998
Q ss_pred ccc---CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccC
Q 014172 225 LTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFS 301 (429)
Q Consensus 225 l~~---~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 301 (429)
++. +++++++++||||||.+++.+++++|+++|++| |++||+||+|.++.|++..+.++..+. .+++|+++|||
T Consensus 160 ~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~-~~~ii~D~~y~~~~~~~~~~~~~~~~~--~~~~i~~~S~S 236 (391)
T PRK07309 160 ILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKY-DIFVISDEVYSELTYTGEPHVSIAEYL--PDQTILINGLS 236 (391)
T ss_pred hhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHc-CcEEEEEccccceeeCCCCCCCHHHhc--cCCEEEEecCh
Confidence 863 689999999999999999999999999999999 999999999999998665455555443 47899999999
Q ss_pred hhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCc
Q 014172 302 KAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV 381 (429)
Q Consensus 302 K~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~ 381 (429)
|.||++|+|+||+++++++++.+.........+++.+.|.++..+|++ ...+....++.|+++|+.+.+.|++. |+
T Consensus 237 K~~g~~GlRvG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~l~~~-~~ 312 (391)
T PRK07309 237 KSHAMTGWRIGLIFAPAEFTAQLIKSHQYLVTAATTMAQFAAVEALTN---GKDDALPMKKEYIKRRDYIIEKMTDL-GF 312 (391)
T ss_pred hhccCccceeEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhC---ChhHHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 999999999999999999999998776555567899999999999986 34455678889999999999999988 89
Q ss_pred eeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 382 KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 382 ~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+..|++|||+|+++|.... .++.+++++|+++.||.|
T Consensus 313 ~~~~p~gg~~~~~~l~~~~~---------~~~~~~~~~l~~~~gv~v 350 (391)
T PRK07309 313 KIIKPDGAFYIFAKIPAGYN---------QDSFKFLQDFARKKAVAF 350 (391)
T ss_pred eecCCCeeEEEEEECCCCCC---------CCHHHHHHHHHHhCCEEE
Confidence 99899999999999985311 257889999888889986
No 43
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=3.2e-49 Score=395.86 Aligned_cols=351 Identities=25% Similarity=0.432 Sum_probs=290.0
Q ss_pred cccccCcccccccCCchhHHHHHHHHHHH--hcCCCeEEcCCCCCC----CCChHHHHHHHHHHHHc-CCCCCCCCCCCH
Q 014172 63 QVDVSLSPRVNAVKPSKTVAITDQATALA--QAGVSVIRLAAGEPD----FDTPVLIAEAGINAIRE-GFTRYTPNAGTL 135 (429)
Q Consensus 63 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~g~~~i~L~~g~~~----~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~ 135 (429)
+|+...+.+........... ..++. ..++++|+|+.|.|+ +.+|+.+.+++.+.+.. ...+|++..|.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~ 78 (412)
T PTZ00433 3 FWDVSMSKHAGRVFNPLRTV----TDNAKPSPSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSP 78 (412)
T ss_pred cccccccHHHHhhhccHHHH----HHhhccCCCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcH
Confidence 35555566665544332222 22333 367789999999987 45788999999888764 347898888999
Q ss_pred HHHHHHHHHHHhhc------CCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCC
Q 014172 136 ELRSAICHKLKEEN------GLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR 209 (429)
Q Consensus 136 ~lr~~ia~~l~~~~------g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~ 209 (429)
+||++|++++++.+ |..+++++|++|+|+++++.+++.+++++||+|+++.|+|..|...++..|++++.++++
T Consensus 79 ~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~ 158 (412)
T PTZ00433 79 EAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCR 158 (412)
T ss_pred HHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecC
Confidence 99999999998765 456889999999999999999999999999999999999999999999999999999997
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCC
Q 014172 210 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 289 (429)
Q Consensus 210 ~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~ 289 (429)
++++|.+|++++++.+++++++|++++||||||.+++.+++++|+++|++| |++||+||+|.++.|++....++..+..
T Consensus 159 ~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~ 237 (412)
T PTZ00433 159 PEKDWEADLDEIRRLVDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEEL-RLPLISDEIYAGMVFNGATFTSVADFDT 237 (412)
T ss_pred ccccCcCCHHHHHHHhccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHc-CCeEEEeccccccccCCCCccchhhccC
Confidence 666788999999999988999999999999999999999999999999999 9999999999999987654455666643
Q ss_pred CCCceEEEeccChhcccccceeeEEEc--C----HHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHH
Q 014172 290 MWERTLTVNGFSKAFAMTGWRLGYIAG--P----KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (429)
Q Consensus 290 ~~~~~i~~~S~SK~~~~~G~R~G~v~~--~----~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~ 363 (429)
..++|+++||||.||++|+|+||+++ + +++++.+.+... ...+++.+.|.++..++... .+.++++.++.
T Consensus 238 -~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~ 313 (412)
T PTZ00433 238 -TVPRVILGGTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGM-LVCGPCSVVQAALGEALLNT--PQEHLEQIVAK 313 (412)
T ss_pred -CCceEEEccchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHhh-ccCCCChHHHHHHHHHHhcC--cHHHHHHHHHH
Confidence 24689999999999999999999997 2 457777766543 23468999999999999752 36889999999
Q ss_pred HHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 364 FRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 364 ~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++++|+.+.+.|+++.|+.+..|++|+|+|++++... .....++.+++++|++++||.|
T Consensus 314 ~~~~r~~l~~~L~~~~~~~~~~p~gg~f~~~~l~~~~------~~~~~~~~~~~~~ll~~~gV~v 372 (412)
T PTZ00433 314 LEEGAMVLYNHIGECIGLSPTMPRGSMFLMSRLDLEK------FRDIKSDVEFYEKLLEEENVQV 372 (412)
T ss_pred HHHHHHHHHHHHhcCCCCcccCCCeeEEEEEEechhh------cCCCCCHHHHHHHHHHhcCEEE
Confidence 9999999999999866888889999999999997410 0001257899999998779976
No 44
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-48 Score=390.62 Aligned_cols=343 Identities=31% Similarity=0.555 Sum_probs=295.7
Q ss_pred cCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHH
Q 014172 67 SLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLK 146 (429)
Q Consensus 67 ~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~ 146 (429)
++++++..+.++.+.++...+.+....|.++|+|+.|.|++++|+.+.+++.+... ....|++..|.+++|+++++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~ 80 (397)
T PRK07568 2 KISKRVLNMPASPIRKLVPYADEAKKRGIKVYHLNIGQPDIKTPEVFFEAIKNYDE-EVLAYSHSQGIPELREAFAKYYK 80 (397)
T ss_pred chhhHhhhCCcchHHHHHHHHHHHHhhCCCEEEecCCCCCCCCCHHHHHHHHHHhc-CCcCcCCCCCCHHHHHHHHHHHH
Confidence 46677777777777777666555445567799999999999889999998877653 45789999999999999999998
Q ss_pred hhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCC-CHHHHHhhc
Q 014172 147 EENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLL-DPKVLESKL 225 (429)
Q Consensus 147 ~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-d~e~l~~~l 225 (429)
.+|..+++++|++|+|+++++..++.+++++||+|++++|+|..|...++..|++++.++++.++++.+ +++.+++++
T Consensus 81 -~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~ 159 (397)
T PRK07568 81 -KWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLI 159 (397)
T ss_pred -HhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhc
Confidence 578778899999999999999999999999999999999999999999999999999999875555553 689999999
Q ss_pred ccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcc
Q 014172 226 TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 305 (429)
Q Consensus 226 ~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 305 (429)
++++++|++++||||||.+++.+++++|+++|+++ +++||+||+|.++.|++....++.++....+++++++||||.||
T Consensus 160 ~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~-~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~ 238 (397)
T PRK07568 160 TPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKH-DLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYS 238 (397)
T ss_pred CccceEEEEECCCCCCCccCCHHHHHHHHHHHHHC-CcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhcc
Confidence 88999999999999999999999999999999999 99999999999998876555566666554689999999999999
Q ss_pred cccceeeEEEcC-HHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceee
Q 014172 306 MTGWRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (429)
Q Consensus 306 ~~G~R~G~v~~~-~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~ 384 (429)
++|+|+||++++ +++++.+.+.... ..+++.+.|.++..+|+. .+++++++++.|+++++.+.+.|++++|+.+.
T Consensus 239 ~~G~R~G~~~~~~~~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 314 (397)
T PRK07568 239 ACGARIGCLISKNKELIAAAMKLCQA-RLSPPTLEQIGAAALLDT---PESYFDEVREEYKKRRDILYEELNKIPGVVCE 314 (397)
T ss_pred CCCcceEEEecCCHHHHHHHHHHhhc-cCCCCcHHHHHHHHHhhC---CHHHHHHHHHHHHHHHHHHHHHHhcCCCceec
Confidence 999999999985 6888887665443 457899999999999986 47889999999999999999999998788888
Q ss_pred cCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHh-----CCeec
Q 014172 385 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDK-----AQVLL 428 (429)
Q Consensus 385 ~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~-----~gV~v 428 (429)
.|+||||+|++++.. ++.+++++|+++ .||.+
T Consensus 315 ~p~g~~~~~~~l~~~------------~~~~~~~~l~~~~~~~~~gv~v 351 (397)
T PRK07568 315 KPKGAFYIIAKLPVD------------DAEDFAKWLLTDFNYNGETVMV 351 (397)
T ss_pred CCCcceEEEEecCCC------------CHHHHHHHHHhhcccccceEEE
Confidence 999999999999742 678999999875 57765
No 45
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=8.3e-49 Score=387.95 Aligned_cols=324 Identities=22% Similarity=0.346 Sum_probs=277.1
Q ss_pred cCCchhHHHHHHHHHHHhc-CCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCC
Q 014172 75 VKPSKTVAITDQATALAQA-GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSY 153 (429)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~-g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~ 153 (429)
+.++.+.++.+.+.++..+ |.++|+|+.|+|++++|+.+.+++.+... ....|++..|..+||+++++++++.+|.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~-~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~ 81 (374)
T PRK05839 3 FEPYPFEKLRELLKEITPNKEYKGLDLTIGEPQFETPKFIQDALKNNAH-LLNKYPKSAGEESLREAQRGFFKRRFKIEL 81 (374)
T ss_pred CCcchHHHHHHHHHHhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHhh-ccCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Confidence 3556777887888888777 77999999999999999888888887653 357898889999999999999999999888
Q ss_pred CCCcEEEecChHHHHHHHHHHhc--CCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcE
Q 014172 154 TPDQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRL 231 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~--~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~ 231 (429)
++++|++|+|+++++..++.+++ ++||.|+++.|+|+.|...++..|++++.++++.+++|.+|++..+ + +++|+
T Consensus 82 ~~~~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~~~k~ 158 (374)
T PRK05839 82 KENELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-QEVDL 158 (374)
T ss_pred CcceEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-ccccE
Confidence 99999999999999998888775 4789999999999999999999999999999987777878776543 2 46899
Q ss_pred EEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccC-----CCCCCceEEEeccChhccc
Q 014172 232 LILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL-----PGMWERTLTVNGFSKAFAM 306 (429)
Q Consensus 232 i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~-----~~~~~~~i~~~S~SK~~~~ 306 (429)
|++++||||||.+++.+++++|+++|++| |++||+||+|.++.+++ ..+++... ....+++|+++||||.|++
T Consensus 159 v~i~nP~NPTG~~~s~~~l~~i~~~~~~~-~~~ii~DE~Y~~~~~~~-~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~ 236 (374)
T PRK05839 159 VILNSPNNPTGRTLSLEELIEWVKLALKH-DFILINDECYSEIYENT-PPPSLLEASILVGNESFKNVLVINSISKRSSA 236 (374)
T ss_pred EEEeCCCCCcCcccCHHHHHHHHHHHHHc-CCEEEeccchhhcccCC-CCCCHhhhhcccCccccCcEEEEeccccccCC
Confidence 99999999999999999999999999999 99999999999976543 23343322 1234799999999999999
Q ss_pred ccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC
Q 014172 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (429)
Q Consensus 307 ~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p 386 (429)
+|+|+||+++++++++.+.+.......+.+.+.|.++..++.. ++++++.++.++++|+.+.+.| ++. .|
T Consensus 237 ~GlRiG~ii~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~l----~~~--~p 306 (374)
T PRK05839 237 PGLRSGFIAGDASILKKYKAYRTYLGCASPLPLQKAAAVAWLD----DEHAEFFRNIYAKNLKLAREIL----GIT--IP 306 (374)
T ss_pred ccceeEEEecCHHHHHHHHHHHhhcCCCCChHHHHHHHHHhcc----chHHHHHHHHHHHHHHHHHHhc----CCC--CC
Confidence 9999999999999999998877666667899999999888864 6788999999999999888765 333 68
Q ss_pred CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 387 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++|+|+|++++ +..+++++|++++||.|
T Consensus 307 ~gg~fi~~~~~--------------~~~~~~~~l~~~~gi~v 334 (374)
T PRK05839 307 PATFYVWLPVD--------------NDEEFTKKLYQNEGIKV 334 (374)
T ss_pred CeeEEEEEeCC--------------ChHHHHHHHHHHCCEEE
Confidence 99999999986 45789999998789976
No 46
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=1.5e-48 Score=389.16 Aligned_cols=340 Identities=26% Similarity=0.410 Sum_probs=290.7
Q ss_pred cccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHHhhcCC
Q 014172 73 NAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGL 151 (429)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~ 151 (429)
..+.++.+..+.+.+...++.|+++++|+.|+|+..+|+.+.+++.+.+.. ....|++..|.++||+++++++.+.+|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~ 86 (395)
T PRK08175 7 DRLPPYVFNITAELKMAARRRGEDIIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDV 86 (395)
T ss_pred hcCCchHHHHHHHHHHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 334444443444555666667889999999999988888888888776643 3578999999999999999999998898
Q ss_pred CCCCC-cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc---c
Q 014172 152 SYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT---E 227 (429)
Q Consensus 152 ~~~~~-~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~---~ 227 (429)
.++++ +|++|+|+++++.+++..++++||+|++++|+|+.+...++..|++++.++++.+++ +++.++++++ +
T Consensus 87 ~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~---~~~~l~~~l~~~~~ 163 (395)
T PRK08175 87 DIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVD---FFNELERAIRESYP 163 (395)
T ss_pred CCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCCC---cHHHHHHHHhhccC
Confidence 88887 899999999999999999999999999999999999999999999999999876543 4778877775 4
Q ss_pred CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccc
Q 014172 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 307 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 307 (429)
+++++++++||||||.+++.+++++|+++|++| |++||+||+|.++.|++....++.+++...+++++++||||.||++
T Consensus 164 ~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~-~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~p 242 (395)
T PRK08175 164 KPKMMILGFPSNPTAQCVELEFFEKVVALAKRY-DVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMA 242 (395)
T ss_pred CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHc-CcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCc
Confidence 789999999999999999999999999999999 9999999999999887655566666654457889999999999999
Q ss_pred cceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCC
Q 014172 308 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 387 (429)
Q Consensus 308 G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~ 387 (429)
|+|+||+++++++++.+.+.......+++.+.|.++..++.. .+++++.+++.|+++++++.+.|+++ |+.+..|+
T Consensus 243 GlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~ 318 (395)
T PRK08175 243 GWRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEG---DQQCVRDIAEQYKRRRDVLVKGLHEA-GWMVEMPK 318 (395)
T ss_pred chhheeeeCCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCC
Confidence 999999999999999998887766777888899999999975 46789999999999999999999998 88888899
Q ss_pred ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 388 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+|+|+|++++..+. ..++.+++.+|++++||.|
T Consensus 319 ~g~~i~i~l~~~~~--------~~~~~~~~~~l~~~~gv~v 351 (395)
T PRK08175 319 ASMYVWAKIPEPYA--------AMGSLEFAKKLLNEAKVCV 351 (395)
T ss_pred EEEEEEEECCcccC--------CCCHHHHHHHHHHhCCEEE
Confidence 99999999986311 0257899999998889986
No 47
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=1.8e-48 Score=389.31 Aligned_cols=337 Identities=24% Similarity=0.406 Sum_probs=283.4
Q ss_pred hHHHHHHHHHHHhcCCCeEEcCCCCCC----CCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHhhcCCCCC
Q 014172 80 TVAITDQATALAQAGVSVIRLAAGEPD----FDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLSYT 154 (429)
Q Consensus 80 ~~~~~~~~~~~~~~g~~~i~L~~g~~~----~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~ 154 (429)
+..+.+........++++|+|+.|+|+ +++++.+.+++.+.+... ...|++..|..+||+++++++.+. +..++
T Consensus 16 ~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~-~~~~~ 94 (401)
T TIGR01264 16 IRAIVDNMKVKPNPEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNP-DGPIE 94 (401)
T ss_pred HHHHHHHHHhhhhcCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhc-CCCCC
Confidence 344555555555567789999999985 777899999998887654 457999999999999999999864 55688
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEE
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLIL 234 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l 234 (429)
+++|++|+|+++++.+++.+++++||+|++++|+|..|...++..|++++.++++.++++.+|++.+++.++++++++++
T Consensus 95 ~~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~ 174 (401)
T TIGR01264 95 ADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALIV 174 (401)
T ss_pred HHHEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccCceEEEE
Confidence 99999999999999999999999999999999999999999999999999999876667889999999998888999999
Q ss_pred cCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEE
Q 014172 235 CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYI 314 (429)
Q Consensus 235 ~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v 314 (429)
++||||||.+++.+++++|+++|+++ +++||+||+|.+|.|++....++..+.. ..++|+++||||.|+++|+|+||+
T Consensus 175 ~~p~NPtG~~~~~~~~~~l~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~SfSK~~~~~GlRiG~i 252 (401)
T TIGR01264 175 NNPSNPCGSVFSRQHLEEILAVAERQ-CLPIIADEIYGDMVFSGATFEPLASLSS-TVPILSCGGLAKRWLVPGWRLGWI 252 (401)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEEhhhhhhccCCcccccHHHcCC-CCcEEEEccCcccCCCccceEEEE
Confidence 99999999999999999999999999 9999999999999987654556666543 346899999999999999999999
Q ss_pred EcCH------HHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCc
Q 014172 315 AGPK------HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG 388 (429)
Q Consensus 315 ~~~~------~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~ 388 (429)
++++ ++++.+..... ...+++.+.|.++..+|.+. .++++++.++.++++|+.+.+.|++++|+.+..|++
T Consensus 253 v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~--~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~ 329 (401)
T TIGR01264 253 IIHDRRGILRDIRDGLVKLSQ-RILGPCTIVQGALPSILLRT--PQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSG 329 (401)
T ss_pred EecCcchhHHHHHHHHHHHhh-ccCCCCcHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCe
Confidence 9874 34444444432 23567899999999999752 368899999999999999999999987888888999
Q ss_pred eEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 389 AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 389 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|+|+|++++... .....++.+++++|++++||.|
T Consensus 330 g~f~~~~~~~~~------~~~~~~~~~~~~~l~~~~gI~v 363 (401)
T TIGR01264 330 AMYMMVGIEMEH------FPEFKNDVEFTERLVAEQSVFC 363 (401)
T ss_pred eeEEEEEecccc------cCCCCCHHHHHHHHHHhCCEEE
Confidence 999999986410 0001257899999998889986
No 48
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=4.2e-48 Score=379.88 Aligned_cols=310 Identities=27% Similarity=0.477 Sum_probs=276.8
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCC-cEEEecChHHHHHHHHHHh
Q 014172 97 VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPD-QILVSNGAKQSILQAVLAV 175 (429)
Q Consensus 97 ~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l 175 (429)
+++|+.|+|++++|+++.+++.+... ...+|++..|..+||+++++++.+.+|+.++++ +|++|+|+++++..++.++
T Consensus 2 ~~~~~~g~p~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~ 80 (350)
T TIGR03537 2 LFDFGTGDPKEPTPPFIRKALIDAVP-EVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVF 80 (350)
T ss_pred eEeccCCCCCCCCCHHHHHHHHHHHh-ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHH
Confidence 68999999999989999999988764 456898889999999999999999999988887 9999999999999999999
Q ss_pred cCCC---CEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHH
Q 014172 176 CSPG---DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 252 (429)
Q Consensus 176 ~~~g---d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~ 252 (429)
+++| |+|+++.|+|+.|...++..|++++.++++.+++|.+|++.+++++.++++++++++||||||.+++.+++++
T Consensus 81 ~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~ 160 (350)
T TIGR03537 81 IDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPRSYLKE 160 (350)
T ss_pred cCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCHHHHHH
Confidence 9887 6999999999999999999999999999976677889999999999889999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhccc
Q 014172 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFT 332 (429)
Q Consensus 253 I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~ 332 (429)
|+++|++| |++||+||+|.++.+++ ...++..+. .+++|+++||||.+|++|+|+||+++++++++.+......+.
T Consensus 161 l~~~a~~~-~~~ii~De~y~~~~~~~-~~~~~~~~~--~~~~i~~~s~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~ 236 (350)
T TIGR03537 161 TIAMCREH-GIILCSDECYTEIYFGE-PPHSALEVG--IENVLAFHSLSKRSGMTGYRSGFVAGDEKLISFLRKLRANFG 236 (350)
T ss_pred HHHHHHHc-CcEEEEeccccccccCC-CCCchhhcC--cCCEEEEeecccccCCccccceeeecCHHHHHHHHHHHHhhc
Confidence 99999999 99999999999887754 333444432 478999999999999999999999999999999998877777
Q ss_pred CCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCC
Q 014172 333 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN 412 (429)
Q Consensus 333 ~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~ 412 (429)
.+.+.+.|.++..++.. ++++++.++.++++++.+.+.|++. |+++.+|++|||+|++++.. .+
T Consensus 237 ~~~~~~~q~~~~~~l~~----~~~~~~~r~~l~~~~~~~~~~l~~~-g~~~~~~~g~~~~~~~~~~~-----------~~ 300 (350)
T TIGR03537 237 VASPDFVQAAAKAAWSD----DNHVLERRKIFKRKRDLFIEFFNKV-GLEYLYPDATFYLWVKVPSG-----------ID 300 (350)
T ss_pred cCCCHHHHHHHHHHhCC----cHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeEEEEEEECCCC-----------CC
Confidence 77777888888888764 6788899999999999999999988 88888999999999999853 36
Q ss_pred hHHHHHHHHHhCCeec
Q 014172 413 SESLCRYLLDKAQVLL 428 (429)
Q Consensus 413 ~~~~~~~Ll~~~gV~v 428 (429)
+.++++.|+++ ||.|
T Consensus 301 ~~~l~~~L~~~-gv~v 315 (350)
T TIGR03537 301 AKDYALRLLEN-GIVV 315 (350)
T ss_pred HHHHHHHHHHC-CEEE
Confidence 78999999875 8876
No 49
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.3e-49 Score=393.90 Aligned_cols=340 Identities=17% Similarity=0.161 Sum_probs=267.3
Q ss_pred ccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCC-CCCChHHHHHHHHHHH----H-cCCCCCCCCCCCHHHHHHHHH
Q 014172 70 PRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP-DFDTPVLIAEAGINAI----R-EGFTRYTPNAGTLELRSAICH 143 (429)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~-~~~~p~~v~~a~~~~~----~-~~~~~Y~~~~G~~~lr~~ia~ 143 (429)
.++...+++.++.+.+.+++ ..++++|+|+.|.| ++++|....+++.+++ . ...++|++..|.++||+++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~ 83 (404)
T PTZ00376 6 SQVPLGPPDPILGLAAAFKA--DPSPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQK 83 (404)
T ss_pred hcCCcCCCChHHHHHHHHhh--cCCcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHH
Confidence 44555666666565555542 22357899999996 5666555555555554 2 234789999999999999999
Q ss_pred HHHhhcCCCCCCCcEE--EecChHHHHHHHHH---HhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCH
Q 014172 144 KLKEENGLSYTPDQIL--VSNGAKQSILQAVL---AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDP 218 (429)
Q Consensus 144 ~l~~~~g~~~~~~~i~--~t~G~~~al~~~l~---~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 218 (429)
|+.+..+..+++++|+ .|.|+++++.+++. +++++||+|++++|+|+.|...++..|++++.+|+.+++++++|+
T Consensus 84 ~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~ 163 (404)
T PTZ00376 84 LLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDF 163 (404)
T ss_pred HhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCH
Confidence 9976666667889998 58999999987765 668999999999999999999999999999999996555688999
Q ss_pred HHHHhhcc---cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCC--CCCccccCCCCCCc
Q 014172 219 KVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA--THTSFASLPGMWER 293 (429)
Q Consensus 219 e~l~~~l~---~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~--~~~~~~~~~~~~~~ 293 (429)
+.+++.+. ++++++++++||||||.+++.+++++|+++|++| +++||+||+|.++.|++. .+.++..+....++
T Consensus 164 ~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~-~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~ 242 (404)
T PTZ00376 164 DGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRK-NLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVE 242 (404)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhC-CcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCc
Confidence 99999884 3456777899999999999999999999999999 999999999999988641 22234444433568
Q ss_pred eEEEeccChhcccccceeeEE---EcCHHHHHHH----HHHhhcccCCCchHHHHHHHHHHhcCCCCh---HHHHHHHHH
Q 014172 294 TLTVNGFSKAFAMTGWRLGYI---AGPKHFVAAC----NKIQSQFTSGASSISQKAGVAALGLGYAGG---EVVSKMVKA 363 (429)
Q Consensus 294 ~i~~~S~SK~~~~~G~R~G~v---~~~~~~~~~l----~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~---~~~~~~~~~ 363 (429)
+|+++||||.|+++|||+||+ ++++++++.+ .+.......+++.++|.++..+|+++...+ +++++.+++
T Consensus 243 vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 322 (404)
T PTZ00376 243 FLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGR 322 (404)
T ss_pred EEEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998 5788765544 333334445678899999999997621112 335667789
Q ss_pred HHHHHHHHHHHhccCC---CceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 364 FRERRDFLVKSFGELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 364 ~~~~r~~l~~~L~~l~---g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|+++|+.+.+.|+++. ++.+..|+||||+|++++ .+++++|++++||.+
T Consensus 323 ~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~~----------------~~~~~~L~~~~~v~v 374 (404)
T PTZ00376 323 IQNMRQLLYDELKALGSPGDWEHIINQIGMFSFTGLT----------------KEQVERLIEKYHIYL 374 (404)
T ss_pred HHHHHHHHHHHHHhcCCCCcccccccCceEEEecCCC----------------HHHHHHHHHhCCEee
Confidence 9999999999999862 255668999999999873 378999999999985
No 50
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=6e-49 Score=392.08 Aligned_cols=340 Identities=15% Similarity=0.174 Sum_probs=269.6
Q ss_pred ccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCC---CCCCCh--HHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHH
Q 014172 70 PRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGE---PDFDTP--VLIAEAGINAIRE-GFTRYTPNAGTLELRSAICH 143 (429)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~---~~~~~p--~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~ 143 (429)
+++..++++.+..+...+++.. .+++|+|+.|. |++.+| +.+.+++.+.++. ...+|++..|.++||+++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~ 80 (396)
T PRK09257 3 EHLEAAPADPILGLMEAFRADP--RPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQE 80 (396)
T ss_pred ccCCCCCCChHHHHHHHHhhCC--CcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHH
Confidence 4456667776666555444322 24689999996 444445 6788888877654 34579999999999999999
Q ss_pred HHHhhcCCCCCCCcE--EEecChHHHHHHHHHHh--cCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHH
Q 014172 144 KLKEENGLSYTPDQI--LVSNGAKQSILQAVLAV--CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPK 219 (429)
Q Consensus 144 ~l~~~~g~~~~~~~i--~~t~G~~~al~~~l~~l--~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e 219 (429)
++.+..+..+++++| ++|+|+++++.++++++ ++|||+|++++|+|+.|...++..|++++.+|+..++++++|++
T Consensus 81 ~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~ 160 (396)
T PRK09257 81 LLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFD 160 (396)
T ss_pred HhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHH
Confidence 998766655678887 99999999999998766 58999999999999999999999999999999844455789999
Q ss_pred HHHhhcc---cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCC-CCCCccccCCCCCCceE
Q 014172 220 VLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP-ATHTSFASLPGMWERTL 295 (429)
Q Consensus 220 ~l~~~l~---~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~-~~~~~~~~~~~~~~~~i 295 (429)
.+++.+. ++++++++++||||||.+++.+++++|+++|++| +++||+||+|.++.|+. ....++..+....+++|
T Consensus 161 ~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~-~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi 239 (396)
T PRK09257 161 AMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKER-GLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELL 239 (396)
T ss_pred HHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhC-CcEEEEeccccccccchHHHHHHHHHHHhcCCcEE
Confidence 9998875 3345566799999999999999999999999999 99999999999988752 22344444444457899
Q ss_pred EEeccChhcccccceeeEEEc---CHH----HHHHHHHHhhcccCCCchHHHHHHHHHHhcCCC---ChHHHHHHHHHHH
Q 014172 296 TVNGFSKAFAMTGWRLGYIAG---PKH----FVAACNKIQSQFTSGASSISQKAGVAALGLGYA---GGEVVSKMVKAFR 365 (429)
Q Consensus 296 ~~~S~SK~~~~~G~R~G~v~~---~~~----~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~---~~~~~~~~~~~~~ 365 (429)
+++||||.|+++|||+||+++ +++ ++..+.........+++.+.|.++..+|..+.. ..++++++++.|+
T Consensus 240 ~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~ 319 (396)
T PRK09257 240 VASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIK 319 (396)
T ss_pred EEEEcCCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999973 444 344444444445556789999999999976321 0456788999999
Q ss_pred HHHHHHHHHhccCC---CceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 366 ERRDFLVKSFGELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 366 ~~r~~l~~~L~~l~---g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++|+.+.+.|+++. ++++..|+||||+|++++ .+++.+|++++||.+
T Consensus 320 ~rr~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~----------------~~~~~~l~~~~~V~~ 369 (396)
T PRK09257 320 AMRQLLVEALKAKGPSRDFDFIARQRGMFSYSGLT----------------PEQVDRLREEFGVYA 369 (396)
T ss_pred HHHHHHHHHHHhcCCCCCcccccccceEEEecCCC----------------HHHHHHHHHcCCEEE
Confidence 99999999999862 377889999999999874 257788889999975
No 51
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=1e-47 Score=384.22 Aligned_cols=349 Identities=28% Similarity=0.438 Sum_probs=284.2
Q ss_pred CcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCC---CCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHH
Q 014172 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP---DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHK 144 (429)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~---~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~ 144 (429)
.++++..+.++.+..+...+++....|+++|+|+.|+| ++++|+.+.+++.+.+.. ...|++..|.++||+++|++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~ 84 (404)
T PRK09265 6 KSSKLENVCYDIRGPVLKEAKRLEEEGHKILKLNIGNPAPFGFEAPDEILRDVIRNLPT-AQGYSDSKGLFSARKAIMQY 84 (404)
T ss_pred hhHHHHhcCcchhHHHHHHHHHHHHcCCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhc-CCCCCCCCCcHHHHHHHHHH
Confidence 45566667777777777788777777889999999998 566788888888877653 56899999999999999999
Q ss_pred HHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhh
Q 014172 145 LKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESK 224 (429)
Q Consensus 145 l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~ 224 (429)
+.+..+..+++++|++|+|+++++..++++++++||+|++++|+|..|...++..|++++.++++.++++.+|++++++.
T Consensus 85 ~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~ 164 (404)
T PRK09265 85 YQQKGIPDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSK 164 (404)
T ss_pred HhccCCCCCCcccEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHh
Confidence 98655446889999999999999999999999999999999999999999999999999999887666788999999999
Q ss_pred cccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhc
Q 014172 225 LTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF 304 (429)
Q Consensus 225 l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 304 (429)
+++++++|++++||||||.+++.+++++|+++|++| |++||+||+|.++.|++....++..+.. ..++++++||||.|
T Consensus 165 ~~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~ 242 (404)
T PRK09265 165 ITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQH-NLIIFADEIYDKILYDGAVHISIASLAP-DLLCVTFNGLSKAY 242 (404)
T ss_pred ccccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHC-CCEEEEehhhhhccCCCCCcCCHHHcCC-CceEEEEecchhhc
Confidence 988999999999999999999999999999999999 9999999999999987655556666543 34789999999999
Q ss_pred ccccceeeEEEc--CHHH----HHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC
Q 014172 305 AMTGWRLGYIAG--PKHF----VAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL 378 (429)
Q Consensus 305 ~~~G~R~G~v~~--~~~~----~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l 378 (429)
|++|+|+||+++ ++++ ++.+... .....+++.++|.++..+|..... .+.+....+.++++|+.+.+.|+++
T Consensus 243 ~~pGlRiG~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~r~~~~~~L~~~ 320 (404)
T PRK09265 243 RVAGFRVGWMVLSGPKKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALGGYQS-INELILPGGRLYEQRDRAWELLNAI 320 (404)
T ss_pred cCcccceEEEEEeCchHHHHHHHHHHHHH-hccccCCCcHHHHHHHHHhcCchh-HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999995 4443 3333322 234467889999999999964110 1112222356788899999999988
Q ss_pred CCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 379 EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 379 ~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+|+++.+|++|||+|++++.... +..++.+++.++++++||.|
T Consensus 321 ~~~~~~~p~~g~~l~~~~~~~~~-------~~~~~~~~~~~~l~~~gv~v 363 (404)
T PRK09265 321 PGVSCVKPKGALYAFPKLDPKVY-------PIHDDEQFVLDLLLQEKVLL 363 (404)
T ss_pred CCCcccCCCcceEEEEEeccccc-------CCCCHHHHHHHHHHhCCEEE
Confidence 88998999999999999975210 01245666667777889986
No 52
>PLN02231 alanine transaminase
Probab=100.00 E-value=2.2e-48 Score=397.51 Aligned_cols=328 Identities=21% Similarity=0.328 Sum_probs=265.0
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHc--C--CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIRE--G--FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 171 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~--~--~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~ 171 (429)
++|+|+.+.+.|+. ++++.+.+.+.+ + ..+|+++.|.++||++||+++.+++|+++++++|++|+|+++++.++
T Consensus 130 ~~i~~~~~~~~fp~--~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~ 207 (534)
T PLN02231 130 SLLDKSETHGLFSA--DAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMM 207 (534)
T ss_pred ccCCCCCccccCCH--HHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHH
Confidence 46666665555543 555555566653 2 46799999999999999999999899999999999999999999999
Q ss_pred HHHhcC-CCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------CCcEEEEcCCCCCccCC
Q 014172 172 VLAVCS-PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSV 244 (429)
Q Consensus 172 l~~l~~-~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~~~~i~l~~p~NPtG~~ 244 (429)
+++++. +||.|+++.|+|+.|...++..|++++.++++++++|.+|+++|++.+++ ++|+++++|||||||.+
T Consensus 208 ~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~v 287 (534)
T PLN02231 208 MQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQV 287 (534)
T ss_pred HHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcC
Confidence 999984 89999999999999999999999999999998777899999999998864 68999999999999999
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCC-CCCCccccCCC------CCCceEEEeccChhc-ccccceeeEEEc
Q 014172 245 YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP-ATHTSFASLPG------MWERTLTVNGFSKAF-AMTGWRLGYIAG 316 (429)
Q Consensus 245 ~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~-~~~~~~~~~~~------~~~~~i~~~S~SK~~-~~~G~R~G~v~~ 316 (429)
++.+++++|+++|++| |++||+||+|.+++|++ ..+.++..+.. ...++|+++||||.+ |++|+|+||+++
T Consensus 288 ls~e~l~~Iv~~a~~~-~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~ 366 (534)
T PLN02231 288 LAEENQRDIVEFCKQE-GLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 366 (534)
T ss_pred CCHHHHHHHHHHHHHc-CCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEE
Confidence 9999999999999999 99999999999999963 44555554421 123689999999976 899999999986
Q ss_pred ---CHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCC----CChH---HHHHHHHHHHHHHHHHHHHhccCCCceeecC
Q 014172 317 ---PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGY----AGGE---VVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (429)
Q Consensus 317 ---~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~----~~~~---~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p 386 (429)
++++++.+.+... ...+++.+.|.++..+++.+. ..++ +.+.+++.|+++++.+.+.|++++|+++.+|
T Consensus 367 ~~~~~~l~~~l~k~~~-~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p 445 (534)
T PLN02231 367 TGFTSDVREQIYKVAS-VNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNKA 445 (534)
T ss_pred ecCCHHHHHHHHHHHh-hhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC
Confidence 6889999887765 456788899999888886421 0123 3445688999999999999999989999999
Q ss_pred CceEEEEEec--CCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 387 QGAFYLFIDF--STYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 387 ~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+||||+|+++ |...-..++.. +..++..++.+|++++||++
T Consensus 446 ~Ggfylw~~l~lp~~~~~~~~~~-~~~~d~~~~~~Ll~~~GV~v 488 (534)
T PLN02231 446 EGAMYLFPRIHLPQKAIKAAEAA-KTAPDAFYCKRLLNATGIVV 488 (534)
T ss_pred CeeeEEeccccCcHHHHHHHhhc-CCCcHHHHHHHHHHhcCEEE
Confidence 9999999665 32100000000 01235567899999999986
No 53
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-47 Score=354.59 Aligned_cols=323 Identities=24% Similarity=0.436 Sum_probs=289.2
Q ss_pred CCeEEcCCCCCC----CCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 95 VSVIRLAAGEPD----FDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 95 ~~~i~L~~g~~~----~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
+++|.|+.|+|. +++.++..+|+.++++.+ .+.|+|+.|....|+++|+|+.+.....+++++|++|+|++++|+
T Consensus 61 k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe 140 (447)
T KOG0259|consen 61 KPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIE 140 (447)
T ss_pred ceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHH
Confidence 489999999974 566789999999999875 578999999999999999999887777789999999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHH
Q 014172 170 QAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNL 249 (429)
Q Consensus 170 ~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~ 249 (429)
.++.++.+||..||+|.|+|+-|...+...|.+++.+++-++.+|++|++.++..++++|.+++++||+||+|.+++.+.
T Consensus 141 ~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~AivviNP~NPcGnVys~~H 220 (447)
T KOG0259|consen 141 LAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVVINPNNPCGNVYSEDH 220 (447)
T ss_pred HHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhccCeeEEEEeCCCCCCcccccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCH--------HHH
Q 014172 250 LDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK--------HFV 321 (429)
Q Consensus 250 l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~--------~~~ 321 (429)
+++|+++|+++ +++||.||+|.+++|++.++.++..+.. ---++.++|+||.|-.||||+||++..+ .++
T Consensus 221 L~kiae~A~kl-gi~vIaDEVY~~~vfg~~pfvpmg~fss-iVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~ 298 (447)
T KOG0259|consen 221 LKKIAETAKKL-GIMVIADEVYGHTVFGDKPFVPMGKFSS-IVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVV 298 (447)
T ss_pred HHHHHHHHHHh-CCeEEehhhcceeecCCCCccchhhccc-cCceEeecccccccccCCceeeeEEEecccccccchHHH
Confidence 99999999999 9999999999999999998888887754 3567999999999999999999998743 345
Q ss_pred HHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCce-eecCCceEEEEEecCCcc
Q 014172 322 AACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFSTYY 400 (429)
Q Consensus 322 ~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~-~~~p~~~~~~~~~l~~~~ 400 (429)
+.+.+... ...++.++.|.|.-..|... .++++......++.+.++.++.|+++|++. ..+|+|.||+|++++-.
T Consensus 299 q~~~~~~~-~~~~p~TiiQ~AlP~IL~kT--p~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s- 374 (447)
T KOG0259|consen 299 QGIKNFLD-IIPGPATIIQGALPDILEKT--PEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLS- 374 (447)
T ss_pred HHHHHHHh-ccCCccHhHHHHhHHHHHhC--hHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchh-
Confidence 66666654 45679999999999999863 478899999999999999999999999998 56899999999988631
Q ss_pred CCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 401 GSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
-+..+.|+.+||.+|.+|..|.+
T Consensus 375 -----~~~~~~dD~dFc~kL~~Eesv~~ 397 (447)
T KOG0259|consen 375 -----LFPDIEDDVDFCQKLAREESVIC 397 (447)
T ss_pred -----hhccccccHHHHHHHhhhcceEE
Confidence 12345689999999999887653
No 54
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=3.5e-47 Score=380.15 Aligned_cols=339 Identities=25% Similarity=0.448 Sum_probs=287.1
Q ss_pred hhHHHHHHHHHHHhcCCCeEEcCCCCCC----CCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHhhcCCCC
Q 014172 79 KTVAITDQATALAQAGVSVIRLAAGEPD----FDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLSY 153 (429)
Q Consensus 79 ~~~~~~~~~~~~~~~g~~~i~L~~g~~~----~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~ 153 (429)
.+.++...+.+...+|.++|+|+.|+|. +++++.+.+++.+.+... ...|++..|..++|+++++++...+|..+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~ 94 (403)
T TIGR01265 15 PIRAIVDNLKVKPNPEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKL 94 (403)
T ss_pred HHHHHHHHHHHHHhcCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCC
Confidence 4556666666655568899999999984 677899999999888654 35798999999999999999998778888
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEE
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLI 233 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~ 233 (429)
++++|++|+|+++++.+++++++++||+|++++|+|..|...++..|++++.+++++++++.+|++.+++.+.+++++++
T Consensus 95 ~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~ 174 (403)
T TIGR01265 95 TADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADEKTVAIV 174 (403)
T ss_pred CHHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCcCccEEE
Confidence 89999999999999999999999999999999999999999999999999999987666788999999999988999999
Q ss_pred EcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeE
Q 014172 234 LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY 313 (429)
Q Consensus 234 l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~ 313 (429)
+++||||||.+++.+++++|+++|+++ |++||+||+|.++.|++....++.++.. ..++|+++||||.|+++|+|+||
T Consensus 175 i~~p~NPtG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~~pGlRiG~ 252 (403)
T TIGR01265 175 VINPSNPCGSVFSRDHLQKIAEVARKL-GIPIIADEIYGHMVFGDAPFIPMASFAS-IVPVLSLGGISKRWVVPGWRLGW 252 (403)
T ss_pred EecCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEEccccccccCCCCccchhhhcc-CCcEEEEeecccccCCCcceEEE
Confidence 999999999999999999999999999 9999999999999987655556666654 35799999999999999999999
Q ss_pred EEcC--HH-----HHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC
Q 014172 314 IAGP--KH-----FVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (429)
Q Consensus 314 v~~~--~~-----~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p 386 (429)
++++ ++ +++.+..... ...+++.+.|.++..+|... .+.++++.+++++++|+.+.+.|+.++|+.+..|
T Consensus 253 ~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p 329 (403)
T TIGR01265 253 IIIHDPHGIFRDTVLQGLKNLLQ-RILGPATIVQGALPDILENT--PQEFFDGKISVLKSNAELCYEELKDIPGLVCPKP 329 (403)
T ss_pred EEEeCchhhhHHHHHHHHHHHhh-hhcCCChHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC
Confidence 9983 23 3344444332 24568999999999999752 3678999999999999999999998878888889
Q ss_pred CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 387 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++|+|+|++++... .....++.+++++|++++||.|
T Consensus 330 ~~g~f~~~~~~~~~------~~~~~~~~~~~~~l~~~~gv~v 365 (403)
T TIGR01265 330 EGAMYLMVKLELEL------FPEIKDDVDFCEKLVREESVIC 365 (403)
T ss_pred CceeEEEEeccccc------cCCCCCHHHHHHHHHHhCCEEE
Confidence 99999999997420 0011267899999888889976
No 55
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=4.1e-48 Score=391.97 Aligned_cols=323 Identities=19% Similarity=0.342 Sum_probs=266.8
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHH------------cCCCCCCCCCCCHHHHHHHHHHHHhhcCCC--CCCCcEEEe
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIR------------EGFTRYTPNAGTLELRSAICHKLKEENGLS--YTPDQILVS 161 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~------------~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~--~~~~~i~~t 161 (429)
.+|+|+.++|.+.. +.+.+.+..... .....|++..|.++||++||+++.+.+|.. +++++|++|
T Consensus 39 g~i~L~~~En~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit 117 (468)
T PLN02450 39 GIIQMGLAENQLSF-DLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVLT 117 (468)
T ss_pred eeEEeehhHhHhhH-HHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEEc
Confidence 58999999998765 555555544311 123458888899999999999999887744 689999999
Q ss_pred cChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHH-HcCCEEEEecCCCCCCCCCCHHHHHhhccc------CCcEEEE
Q 014172 162 NGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR-IADATPVILPTRISENFLLDPKVLESKLTE------KSRLLIL 234 (429)
Q Consensus 162 ~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~~~~i~l 234 (429)
+|+++++..++.++++|||.|++++|+|+.|...+. ..|++++.++++.+++|.+|++.+++++.+ ++|+|++
T Consensus 118 ~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l 197 (468)
T PLN02450 118 AGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLI 197 (468)
T ss_pred cChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEE
Confidence 999999999999999999999999999999988888 589999999987677888999999988753 7899999
Q ss_pred cCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCC--------CCCCceEEEeccChhccc
Q 014172 235 CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP--------GMWERTLTVNGFSKAFAM 306 (429)
Q Consensus 235 ~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~--------~~~~~~i~~~S~SK~~~~ 306 (429)
++||||||.+++.+++++|+++|++| +++||+||+|.++.|++....++.++. ...+++++++||||.|++
T Consensus 198 ~nP~NPTG~~~s~e~l~~ll~~a~~~-~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l 276 (468)
T PLN02450 198 TNPSNPLGTTTTRTELNLLVDFITAK-NIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGL 276 (468)
T ss_pred ecCCCCCCcccCHHHHHHHHHHHHHC-CcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCC
Confidence 99999999999999999999999999 999999999999988764444443321 125799999999999999
Q ss_pred ccceeeEEEcCHH-HHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeec
Q 014172 307 TGWRLGYIAGPKH-FVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 385 (429)
Q Consensus 307 ~G~R~G~v~~~~~-~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~ 385 (429)
+|+|+||++++++ +++.+.+... + .+++.++|.++..+|+++.....++++.+++|+++|+.+.+.|+++ |+.+.+
T Consensus 277 ~GlRiG~li~~~~~l~~~~~~~~~-~-~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~~~~ 353 (468)
T PLN02450 277 PGFRVGAIYSNDEMVVSAATKMSS-F-GLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-GIKCLK 353 (468)
T ss_pred CCccEEEEEECCHHHHHHHHHHhh-c-CCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccC
Confidence 9999999999854 5666665532 2 3478999999999998743323578889999999999999999998 898889
Q ss_pred CCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 386 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 386 p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|++|||+|++++..... . ...+..+++++|++++||.|
T Consensus 354 ~~~g~flwi~l~~~~~~--~---~~~~~~~l~~~ll~~~gV~v 391 (468)
T PLN02450 354 SNAGLFCWVDMRHLLKS--N---TFEAEMELWKKIVYEVKLNI 391 (468)
T ss_pred CCceEEEEEEchHhcCc--C---CchHHHHHHHHHHHhCCEEE
Confidence 99999999999753210 0 11234678999999889986
No 56
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=9.9e-47 Score=376.77 Aligned_cols=336 Identities=27% Similarity=0.383 Sum_probs=273.6
Q ss_pred cccccccCCc-hhHHHHHHHHHHHh--cCCCeEEcCCCCCCCCChHHHHHHHHHHHHcC-----CCCCCCCCCCHHHHHH
Q 014172 69 SPRVNAVKPS-KTVAITDQATALAQ--AGVSVIRLAAGEPDFDTPVLIAEAGINAIREG-----FTRYTPNAGTLELRSA 140 (429)
Q Consensus 69 s~~~~~~~~~-~~~~~~~~~~~~~~--~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~-----~~~Y~~~~G~~~lr~~ 140 (429)
++.+.+++++ .+.++..++.+.+. .+.++|+|+.|+|++++|+.+.+++.+.+.+. ...|+|..|.++||++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~a 83 (402)
T TIGR03542 4 NPHFLKLKSSYLFSEINRRVNEFRKKHPSADIIRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREA 83 (402)
T ss_pred CCCccccCcchHHHHHHHHHHHHHhccCCCCeEEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHH
Confidence 4555666665 45566666666654 35689999999999999999999999887642 3569899999999999
Q ss_pred HHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCC-----------EEEEecCC
Q 014172 141 ICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA-----------TPVILPTR 209 (429)
Q Consensus 141 ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~-----------~~~~v~~~ 209 (429)
+|+++.+. + +++++|++|+|+++++..+ ..++.+||+|++++|+|..|...++..|+ +++.++++
T Consensus 84 ia~~~~~~-~--~~~d~I~it~Ga~~al~~l-~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~ 159 (402)
T TIGR03542 84 IAENDYRG-R--IDPEEIFISDGAKCDVFRL-QSLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCT 159 (402)
T ss_pred HHHHHHhc-C--CCHHHEEECCCcHHHHHHH-HHhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecc
Confidence 99986422 2 7889999999999999975 56678999999999999999999999999 99999987
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCC
Q 014172 210 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 289 (429)
Q Consensus 210 ~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~ 289 (429)
.++++.+|++. .+++++|++++||||||.+++.+++++|+++|++| +++||+||+|.+|.+++..+.++..++.
T Consensus 160 ~~~~~~~~~~~-----~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~ 233 (402)
T TIGR03542 160 KENNFIPDLPE-----EPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEH-GSLILFDAAYSAFISDPSLPHSIFEIPG 233 (402)
T ss_pred hhhCCCCCccc-----cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHc-CeEEEEEchhhhhccCCCCCcchhhCCC
Confidence 66666666432 14789999999999999999999999999999999 9999999999999886644445555555
Q ss_pred CCCceEEEeccChhcccccceeeEEEcCHHHH--------HHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHH
Q 014172 290 MWERTLTVNGFSKAFAMTGWRLGYIAGPKHFV--------AACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 361 (429)
Q Consensus 290 ~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~--------~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~ 361 (429)
..+++|+++||||.||++|+|+||++++++++ ..+.........+++.+.|.++..++..+. .+++.+.+
T Consensus 234 ~~~~vi~~~SfSK~~g~pGlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~--~~~~~~~~ 311 (402)
T TIGR03542 234 AKECAIEFRSFSKTAGFTGVRLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEG--LQPILEAI 311 (402)
T ss_pred CcccEEEEecCccccCCCCcceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcc--hhHHHHHH
Confidence 45789999999999999999999999999876 222222222333578899999888887532 35677788
Q ss_pred HHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 362 KAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 362 ~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.|+++|+.+.+.|++. |+++..|.+++|+|++++.. .++.+++++|++++||.|
T Consensus 312 ~~~~~~~~~~~~~L~~~-~~~~~~~~~~~f~~v~l~~~-----------~~~~~l~~~l~~~~gv~v 366 (402)
T TIGR03542 312 SYYMENARILRKALEAA-GFKVYGGEHAPYLWVKTPEG-----------ISSWDFFDFLLYQYHVVG 366 (402)
T ss_pred HHHHHHHHHHHHHHHhc-CceecCCCceeEEEEECCCC-----------CCHHHHHHHHHHhCCEEE
Confidence 99999999999999987 78888888999999999853 367899999998889976
No 57
>PLN02397 aspartate transaminase
Probab=100.00 E-value=9.9e-48 Score=385.41 Aligned_cols=338 Identities=16% Similarity=0.182 Sum_probs=255.6
Q ss_pred ccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCC-CCCCChHHHHHHHHHH----HHcC-CCCCCCCCCCHHHHHHHHH
Q 014172 70 PRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGE-PDFDTPVLIAEAGINA----IREG-FTRYTPNAGTLELRSAICH 143 (429)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~-~~~~~p~~v~~a~~~~----~~~~-~~~Y~~~~G~~~lr~~ia~ 143 (429)
.++...+...+..+.+.++. ..+...|+|+.|. |+...++.+.+++.++ +..+ ..+|++..|.++||+++++
T Consensus 25 ~~~~~~~~~~i~~~~~~~~~--~~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~ 102 (423)
T PLN02397 25 EHVEPAPPDPILGVTEAFLA--DPSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAK 102 (423)
T ss_pred HcCCcCCCChHHHHHHHHhh--CCCcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHH
Confidence 44555566666565554433 2345689999996 6665555444444443 3333 3479999999999999999
Q ss_pred HHHhhcCCCCCCCcE-----EEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCH
Q 014172 144 KLKEENGLSYTPDQI-----LVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDP 218 (429)
Q Consensus 144 ~l~~~~g~~~~~~~i-----~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 218 (429)
|+.+.++...++++| +.++|+. .+...+..++.|||+|++++|+|+.|...++..|++++.+++..++++.+|+
T Consensus 103 ~~~~~~~~~~~~~~i~~~~i~~g~Ga~-~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~ 181 (423)
T PLN02397 103 LAYGADSPAIKENRVATVQCLSGTGSL-RLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDF 181 (423)
T ss_pred HHcCCCCchhhcCeeEeeecccchHHH-HHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCH
Confidence 997654433333444 3333333 3444555666799999999999999999999999999999985444588999
Q ss_pred HHHHhhcc---cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCC--CCCccccCCCCCCc
Q 014172 219 KVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA--THTSFASLPGMWER 293 (429)
Q Consensus 219 e~l~~~l~---~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~--~~~~~~~~~~~~~~ 293 (429)
+.+++.+. ++++++++++||||||.+++.+++++|+++|++| |++||+||+|.+|.|++. .+.++..+....++
T Consensus 182 ~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~-~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~ 260 (423)
T PLN02397 182 DGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSK-NHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHE 260 (423)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhC-CcEEEEecccCCccCCchhhhhHHHHHHHhcCCc
Confidence 98887764 5678888999999999999999999999999999 999999999999998641 23344344333467
Q ss_pred eEEEeccChhcccccceeeEEE--c-CHHHHH----HHHHHhhcccCCCchHHHHHHHHHHhcCCCChHH---HHHHHHH
Q 014172 294 TLTVNGFSKAFAMTGWRLGYIA--G-PKHFVA----ACNKIQSQFTSGASSISQKAGVAALGLGYAGGEV---VSKMVKA 363 (429)
Q Consensus 294 ~i~~~S~SK~~~~~G~R~G~v~--~-~~~~~~----~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~---~~~~~~~ 363 (429)
+|+++||||.|+|+|||+||++ + ++++++ .+.+.......+++.+.|.++..+|+.+...++| ++++++.
T Consensus 261 vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~ 340 (423)
T PLN02397 261 ILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADR 340 (423)
T ss_pred EEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999984 3 565544 4444444556678889999999889762111233 6788999
Q ss_pred HHHHHHHHHHHhccCCC----ceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 364 FRERRDFLVKSFGELEG----VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 364 ~~~~r~~l~~~L~~l~g----~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|+++|+.+.+.|+++ | +++..|+||||+|++++ .+|+++|++++||+|
T Consensus 341 ~~~rr~~l~~~L~~~-~~~~~~~~~~p~gg~fl~~~l~----------------~~~~~~Ll~~~~V~v 392 (423)
T PLN02397 341 IISMRQKLYDALEAR-GSPGDWSHITKQIGMFSFTGLN----------------KEQVDRMTKEYHIYM 392 (423)
T ss_pred HHHHHHHHHHHHHhc-CCCCCCCcccCCceEEEecCCC----------------HHHHHHHHHhCCEEE
Confidence 999999999999998 5 77788999999999873 359999999999986
No 58
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=6.3e-47 Score=381.51 Aligned_cols=315 Identities=26% Similarity=0.434 Sum_probs=282.4
Q ss_pred CCeEEcCCCCCCCCC-h-HHHHHHHHHHHHc---C-CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 95 VSVIRLAAGEPDFDT-P-VLIAEAGINAIRE---G-FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~-p-~~v~~a~~~~~~~---~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
...|+|+.|.|+... | ..+.+++.+.++. . ...|++..|.++||++|++++....|+.+++++|++|+|+++++
T Consensus 89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al 168 (459)
T COG1167 89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQAL 168 (459)
T ss_pred CceecCCCCCCCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHH
Confidence 578999999977654 3 4566666666542 2 46788889999999999999998899999999999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-CCcEEEE-cCCCCCccCCCC
Q 014172 169 LQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLIL-CSPSNPTGSVYP 246 (429)
Q Consensus 169 ~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l-~~p~NPtG~~~~ 246 (429)
+++++.+++|||+|++++|+|.....+++..|++++.||++.++ +|+|.+++.+.. ++|++|+ ++-|||||.+|+
T Consensus 169 ~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~G---~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms 245 (459)
T COG1167 169 DLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVDEDG---IDPEALEEALAQWKPKAVYVTPTFQNPTGVTMS 245 (459)
T ss_pred HHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCCCC---CCHHHHHHHHhhcCCcEEEECCCCCCCCCCccC
Confidence 99999999999999999999999999999999999999997433 899999999875 7899885 777999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHH
Q 014172 247 KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK 326 (429)
Q Consensus 247 ~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~ 326 (429)
.++.++|+++|++| |++||+||.|++|.|++...+++..++. .++||+++||||+++ ||+|+||+++++++++.+..
T Consensus 246 ~~rR~~Ll~lA~~~-~~~IIEDD~y~el~~~~~p~~~l~~ld~-~~rViy~gSFSK~l~-PglRlG~vv~p~~~~~~~~~ 322 (459)
T COG1167 246 LERRKALLALAEKY-DVLIIEDDYYGELRYDGPPPPPLKALDA-PGRVIYLGSFSKTLA-PGLRLGYVVAPPELIEKLLR 322 (459)
T ss_pred HHHHHHHHHHHHHc-CCeEEeeCcchhhhcCCCCCCChHhhCC-CCCEEEEeeehhhcc-cccceeeeeCCHHHHHHHHH
Confidence 99999999999999 9999999999999999877777777765 699999999999997 99999999999999999999
Q ss_pred HhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC-C-CceeecCCceEEEEEecCCccCCcc
Q 014172 327 IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL-E-GVKMSEPQGAFYLFIDFSTYYGSEA 404 (429)
Q Consensus 327 ~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l-~-g~~~~~p~~~~~~~~~l~~~~~~~~ 404 (429)
.+.....+++.+.|.++...+..+.+ ++|++++++.|++||+.+.++|++. + +++|..|.||||+|+++|..
T Consensus 323 ~k~~~~~~~s~~~Q~~la~~l~~G~~-~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~----- 396 (459)
T COG1167 323 LKQAADLGPSSLSQAALAAFLLSGHY-DRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEG----- 396 (459)
T ss_pred HHHHhcCCCChHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCC-----
Confidence 99999999999999999999997554 8999999999999999999999995 4 58899999999999999975
Q ss_pred cCCCCCCChHHHHHHHHHhCCeec
Q 014172 405 EGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 405 ~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.++.++..+++++ ||.+
T Consensus 397 ------~~~~~l~~~a~~~-gv~i 413 (459)
T COG1167 397 ------IDARELLAAALEK-GVVV 413 (459)
T ss_pred ------CCHHHHHHHHHHC-CCEE
Confidence 3788999999887 6654
No 59
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-47 Score=387.00 Aligned_cols=320 Identities=22% Similarity=0.322 Sum_probs=253.8
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHh-hcCCCC-C--CCcEEEecChHHHHHHH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE-ENGLSY-T--PDQILVSNGAKQSILQA 171 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~-~~g~~~-~--~~~i~~t~G~~~al~~~ 171 (429)
++|+|+.|+|++++|+.+.++. +++.. .+|+++.|.++||++|++++.+ .++... . .++|++|+|+++++..+
T Consensus 101 ~~i~l~~g~p~~~~~~~v~e~~-~~~~~--~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~ 177 (527)
T PRK09275 101 DAVSYVRDQLGFDADEFVYELV-DGIIG--DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYI 177 (527)
T ss_pred HHHhhcCCCCCCCCCHHHHHHH-HHHhc--CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHH
Confidence 4799999999999998888844 44433 3599999999999999985544 333222 2 34999999999999999
Q ss_pred HHH-----hcCCCCEEEEcCCCCCChHHHHHHcC--CEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCC
Q 014172 172 VLA-----VCSPGDEVIIPAPFWVSYPEMARIAD--ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSV 244 (429)
Q Consensus 172 l~~-----l~~~gd~Vlv~~p~y~~~~~~~~~~g--~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~ 244 (429)
+.+ +++|||+|++++|+|+.|...+++.| ++++.++.+++++|.+|++++++++++++|+|++++||||||.+
T Consensus 178 ~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v 257 (527)
T PRK09275 178 FDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSIKALFLVNPSNPPSVA 257 (527)
T ss_pred HHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCCEEEEeCCcCCcCCC
Confidence 886 68999999999999999999998885 55566666566789999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhC-CCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHH----
Q 014172 245 YPKNLLDEIARIVAKH-PRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH---- 319 (429)
Q Consensus 245 ~~~~~l~~I~~~a~~~-~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~---- 319 (429)
++.+++++|+++|+++ ++++||+||+|.++.+ .+.++... ..+++|+++||||.|||+|||+||++++++
T Consensus 258 ~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~s~~~~--~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~ 332 (527)
T PRK09275 258 MSDESLEKIADIVNEKRPDLMIITDDVYGTFVD---DFRSLFAV--LPYNTILVYSFSKYFGATGWRLGVIALHEDNVFD 332 (527)
T ss_pred CCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc---cccCHHHh--CCCCEEEEeehhhhccCcHhHHhhhhcCchhHHH
Confidence 9999999999999542 2899999999999764 23344333 247999999999999999999999999876
Q ss_pred -HHHHH--------------------------------HHHhhcccCCCchHHHHHH-----HHHHhcCCCChHHHHHHH
Q 014172 320 -FVAAC--------------------------------NKIQSQFTSGASSISQKAG-----VAALGLGYAGGEVVSKMV 361 (429)
Q Consensus 320 -~~~~l--------------------------------~~~~~~~~~~~~~~~q~aa-----~~~l~~~~~~~~~~~~~~ 361 (429)
+++.+ +++....+.|++.+.|.++ .++|+. .+++++.++
T Consensus 333 ~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~---~~~~~~~~~ 409 (527)
T PRK09275 333 KLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDE---EDAYKKAMK 409 (527)
T ss_pred HHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhC---chHHHHHHH
Confidence 33333 4666777889999999872 344554 467899999
Q ss_pred HHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCcc----CC-cccCCCCCCChHHHHHHHHHhCCeec
Q 014172 362 KAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYY----GS-EAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 362 ~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~----~~-~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.|++||+.+.+.|. + ++...+|+|+||+|++++... +. .+.-.....++.+|+.+|++++||++
T Consensus 410 ~~~~~Rr~~l~~~Lg-~-~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v 479 (527)
T PRK09275 410 DIIRRRYKALYEGLG-L-PEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVL 479 (527)
T ss_pred HHHHHHHHHHHHHcC-C-CCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEE
Confidence 999999999999983 2 344457999999999997531 10 00000011268899999999999986
No 60
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=3e-46 Score=368.73 Aligned_cols=325 Identities=26% Similarity=0.352 Sum_probs=269.9
Q ss_pred ccCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHH
Q 014172 66 VSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKL 145 (429)
Q Consensus 66 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l 145 (429)
|.+|.+++...... +...+......+.++|+|+.|+|..+.++.+.+++.+... ..+|++..|.++||+++++++
T Consensus 1 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~l 75 (364)
T PRK07865 1 MPVSARLPDFPWDT---LAPAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAAD--APGYPTTAGTPELREAIVGWL 75 (364)
T ss_pred CCccccCCCccHHH---HHHHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHh--hCCCCCccCCHHHHHHHHHHH
Confidence 45667776665543 3333333445566799999999987778888888876643 358988899999999999999
Q ss_pred HhhcCCC-CCCCcEEEecChHHHHHHHHHHh-cCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHh
Q 014172 146 KEENGLS-YTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLES 223 (429)
Q Consensus 146 ~~~~g~~-~~~~~i~~t~G~~~al~~~l~~l-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~ 223 (429)
.+.+|++ +++++|++|+|+++++..++..+ +++||.|++++|+|+.|...++..|++++.++. ++++..
T Consensus 76 ~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~---------~~~l~~ 146 (364)
T PRK07865 76 ARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRADS---------LTELGP 146 (364)
T ss_pred HHHcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecCC---------hhhCCc
Confidence 9998986 88999999999999999888888 799999999999999999999999999988752 233322
Q ss_pred hcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccC---CCCCCceEEEecc
Q 014172 224 KLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL---PGMWERTLTVNGF 300 (429)
Q Consensus 224 ~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~---~~~~~~~i~~~S~ 300 (429)
+++++|++++||||||.+++.+++++|+++|++| |++||+||+|.++.|++.. .+.... ....+++|+++||
T Consensus 147 ---~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~S~ 221 (364)
T PRK07865 147 ---QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARER-GAVVASDECYLELGWDAEP-VSILDPRVCGGDHTGLLAVHSL 221 (364)
T ss_pred ---ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHc-CCEEEEecchhhhccCCCC-CccccccccCCccceEEEEeec
Confidence 5789999999999999999999999999999999 9999999999998886532 222111 1234789999999
Q ss_pred ChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCC
Q 014172 301 SKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG 380 (429)
Q Consensus 301 SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g 380 (429)
||.|+++|+|+||+++++++++.+.........+++.+.|.++..+|.. .+++++.++.|+++++.+.+.|++. |
T Consensus 222 SK~~~~~GlRiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g 296 (364)
T PRK07865 222 SKQSNLAGYRAGFVAGDPALVAELLEVRKHAGMMVPAPVQAAMVAALGD----DAHVREQRERYARRRAVLRPALEAA-G 296 (364)
T ss_pred hhccCCCceeeEEEecCHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHHHHc-C
Confidence 9999999999999999999999998877666677899999999998875 6788899999999999999999987 8
Q ss_pred ceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 381 VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 381 ~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.+..|++|||+|++++. +..++++.|.+ .||.|
T Consensus 297 ~~~~~~~~~~~~~~~~~~-------------~~~~~~~~l~~-~gv~v 330 (364)
T PRK07865 297 FRVDHSEAGLYLWATRGE-------------DCWDTVAWLAE-RGILV 330 (364)
T ss_pred CcccCCCccEEEEEeCCC-------------CHHHHHHHHHH-CCEEE
Confidence 888889999999998842 46678877655 59976
No 61
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=6.6e-47 Score=381.41 Aligned_cols=306 Identities=21% Similarity=0.258 Sum_probs=264.0
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 174 (429)
...++|+.|.|+.++++.+.+++.+.... ...|++..|..+||+++++++.+..+ .+++|++|+|++++|.+++++
T Consensus 85 ~~~i~L~~g~p~~~~~p~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iiit~G~~~al~~~~~~ 160 (431)
T PRK15481 85 TPLHDLAGGNPDPQRLPDLSRYFARLSRT-PRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDLTSGAIDAIERLLCA 160 (431)
T ss_pred chhhhhhcCCCChhHhHHHHHHHHHhhhh-hhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEEecCcHHHHHHHHHH
Confidence 45799999999988877788887775543 45799999999999999999875432 356999999999999999999
Q ss_pred hcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEc-CCCCCccCCCCHHHHHHH
Q 014172 175 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC-SPSNPTGSVYPKNLLDEI 253 (429)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~-~p~NPtG~~~~~~~l~~I 253 (429)
+++|||+|++++|+|..|...++..|++++.+|++.+ .+|++.+++++++++|+++++ +||||||.+++.+++++|
T Consensus 161 l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~---g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~~~~~~l 237 (431)
T PRK15481 161 HLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAE---GMQPEKLERALAQGARAVILTPRAHNPTGCSLSARRAAAL 237 (431)
T ss_pred hCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCC---CCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCHHHHHHH
Confidence 9999999999999999999999999999999998643 389999999998889999886 999999999999999999
Q ss_pred HHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccC
Q 014172 254 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS 333 (429)
Q Consensus 254 ~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~ 333 (429)
+++|++|++++||+||+|.++.+.+. .+.... ..+++|+++||||.|+ +|+|+||+++++++++.+.........
T Consensus 238 ~~la~~~~~~~ii~De~Y~~~~~~~~--~~~~~~--~~~~vi~~~SfSK~~~-~GlRiG~~i~~~~~~~~~~~~~~~~~~ 312 (431)
T PRK15481 238 RNLLARYPQVLVIIDDHFALLSSSPY--HSVIPQ--TTQRWALIRSVSKALG-PDLRLAFVASDSATSARLRLRLNSGTQ 312 (431)
T ss_pred HHHHHhcCCceEEecCchhhhccCCC--CCCCcC--CCCCEEEEeeeccccC-CCceeEEEeCCHHHHHHHHHHHhcccc
Confidence 99999986899999999999876542 222222 3479999999999999 999999999999999999876666556
Q ss_pred CCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCCh
Q 014172 334 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 413 (429)
Q Consensus 334 ~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~ 413 (429)
+++.+.|.++..+|+++.. .+|++++++.|+++|+.+.+.|++. |+++..|++|||+|++++. ++
T Consensus 313 ~~s~~~q~a~~~~l~~~~~-~~~l~~~~~~~~~~r~~~~~~L~~~-~~~~~~p~gg~f~~~~l~~-------------~~ 377 (431)
T PRK15481 313 WVSHLLQDLVYACLTDPEY-QARLAQARLFYAQRRQKLARALQQY-GIAIPSPGDGLNLWLPLDT-------------DS 377 (431)
T ss_pred CCCHHHHHHHHHHHhCccH-HHHHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCeEEEEEECCC-------------CH
Confidence 7899999999999987432 5678999999999999999999998 8888789999999999973 46
Q ss_pred HHHHHHHHHhCCeec
Q 014172 414 ESLCRYLLDKAQVLL 428 (429)
Q Consensus 414 ~~~~~~Ll~~~gV~v 428 (429)
.+++++|.+ +||.|
T Consensus 378 ~~~~~~l~~-~gV~v 391 (431)
T PRK15481 378 QATALTLAK-SGWLV 391 (431)
T ss_pred HHHHHHHHH-CCcEE
Confidence 789998875 59876
No 62
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=4.5e-46 Score=366.37 Aligned_cols=319 Identities=26% Similarity=0.332 Sum_probs=271.9
Q ss_pred CCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCC-CC
Q 014172 76 KPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLS-YT 154 (429)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~-~~ 154 (429)
++.+++.+...+++.++.+.++|+|+.|+|+.++++.+.+++.+... ...|++..|.++||+++++++++.+|++ ++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~ 79 (357)
T TIGR03539 2 PDFPWDSLAPYKAKAASHPDGIVDLSVGTPVDPVPPLIRAALAAAAD--APGYPQTWGTPELREAIVDWLERRRGVPGLD 79 (357)
T ss_pred CcchHHHHHHHHHHhhhCCCCeEEccCCCCCCCCCHHHHHHHHHHHh--hCCCCcccCCHHHHHHHHHHHHHhcCCCCCC
Confidence 45667788888888888888899999999988888888888877653 4679888999999999999999988987 99
Q ss_pred CCcEEEecChHHHHHHHHHHh-cCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEE
Q 014172 155 PDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLI 233 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~ 233 (429)
+++|++|+|+++++..++..+ +++||.|++++|+|+.|...++..|++++.++ +++.+. .+++++|+
T Consensus 80 ~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~---------~~~~l~---~~~~~~v~ 147 (357)
T TIGR03539 80 PTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD---------DPTELD---PVGPDLIW 147 (357)
T ss_pred cCeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC---------ChhhcC---ccCccEEE
Confidence 999999999999999988888 79999999999999999999999999988874 223332 24789999
Q ss_pred EcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCcccc--CCCCCCceEEEeccChhccccccee
Q 014172 234 LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS--LPGMWERTLTVNGFSKAFAMTGWRL 311 (429)
Q Consensus 234 l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~--~~~~~~~~i~~~S~SK~~~~~G~R~ 311 (429)
+++|+||||.+++.+++++|+++|++| |++||+||+|.++.|++.....+.. .+...+++|+++||||.|+++|+|+
T Consensus 148 ~~~p~NPtG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~ 226 (357)
T TIGR03539 148 LNSPGNPTGRVLSVDELRAIVAWARER-GAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRA 226 (357)
T ss_pred EeCCCCCcCccCCHHHHHHHHHHHHHc-CeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeE
Confidence 999999999999999999999999999 9999999999998886532111111 1223468999999999999999999
Q ss_pred eEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEE
Q 014172 312 GYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY 391 (429)
Q Consensus 312 G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~ 391 (429)
||+++++++++.+.+.......+++.+.|.++..+|.. ..++++.++.|+++++.+.+.|++. |+.+.+|++|+|
T Consensus 227 G~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~p~~~~~ 301 (357)
T TIGR03539 227 GFVAGDPALVAELLTVRKHAGLMVPAPVQAAMVAALGD----DGHVAEQKARYAARRAQLKPALEKA-GFRIDHSEAGLY 301 (357)
T ss_pred EEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHcCC----HHHHHHHHHHHHHHHHHHHHHHHHc-CCCCcCCCccEE
Confidence 99999999999998877666678899999999999874 6778889999999999999999987 888889999999
Q ss_pred EEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 392 LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 392 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+|++++. +..+++++|. ++||.|
T Consensus 302 ~~~~~~~-------------~~~~~~~~l~-~~gV~v 324 (357)
T TIGR03539 302 LWATRGE-------------DAWDTVDRLA-ELGILV 324 (357)
T ss_pred EEEECCC-------------CHHHHHHHHH-hCCEEE
Confidence 9999852 5667887775 559976
No 63
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=6.1e-47 Score=384.79 Aligned_cols=326 Identities=20% Similarity=0.360 Sum_probs=265.1
Q ss_pred CeEEcCCCCCCC--CC-hHHHHHHHHHHHHc--------CCCCCCCCCCCHHHHHHHHHHHHhhcC--CCCCCCcEEEec
Q 014172 96 SVIRLAAGEPDF--DT-PVLIAEAGINAIRE--------GFTRYTPNAGTLELRSAICHKLKEENG--LSYTPDQILVSN 162 (429)
Q Consensus 96 ~~i~L~~g~~~~--~~-p~~v~~a~~~~~~~--------~~~~Y~~~~G~~~lr~~ia~~l~~~~g--~~~~~~~i~~t~ 162 (429)
.+|+|+.+++.+ +. ++.+.+.....+.. ....|++..|.++||++||+++++.+| +++++++|++|+
T Consensus 47 g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~ 126 (496)
T PLN02376 47 GIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSG 126 (496)
T ss_pred ceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEcc
Confidence 589999999987 44 45555544432111 134688889999999999999999888 668999999999
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHH-HcCCEEEEecCCCCCCCCCCHHHHHhhc------ccCCcEEEEc
Q 014172 163 GAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR-IADATPVILPTRISENFLLDPKVLESKL------TEKSRLLILC 235 (429)
Q Consensus 163 G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~e~l~~~l------~~~~~~i~l~ 235 (429)
|+++++..+++++++|||.|++++|+|+.|...++ ..|++++.++++.+++|.+|++.+++++ ..++|+|+++
T Consensus 127 Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~ 206 (496)
T PLN02376 127 GATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILT 206 (496)
T ss_pred chHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEc
Confidence 99999999999999999999999999999998887 5899999999976677889999997653 2478999999
Q ss_pred CCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCC-------CCceEEEeccChhccccc
Q 014172 236 SPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM-------WERTLTVNGFSKAFAMTG 308 (429)
Q Consensus 236 ~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~-------~~~~i~~~S~SK~~~~~G 308 (429)
+||||||.+++.+++++|+++|++| +++||+||+|.++.|++..+.++.++... .+++++++||||.||++|
T Consensus 207 nP~NPTG~~~s~e~l~~L~~~a~~~-~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpG 285 (496)
T PLN02376 207 NPSNPLGTMLDKDTLTNLVRFVTRK-NIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPG 285 (496)
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHc-CCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCc
Confidence 9999999999999999999999999 99999999999999887656666555221 246778999999999999
Q ss_pred ceeeEEEcC-HHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCC
Q 014172 309 WRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 387 (429)
Q Consensus 309 ~R~G~v~~~-~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~ 387 (429)
+|+||++++ +.+++.+...... ..++.+.|.++..+|.++...++++.+.++.|+++++.+.+.|++. |+++.+|+
T Consensus 286 lRvG~li~~~~~l~~~~~~~~~~--~~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~-gi~~~~~~ 362 (496)
T PLN02376 286 FRVGIVYSFNDSVVSCARKMSSF--GLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA-DIACLTSN 362 (496)
T ss_pred ceEEEEEECCHHHHHHHHHHhhc--CCCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCC
Confidence 999999985 5566655544332 2478999999999998633224567778999999999999999987 88888999
Q ss_pred ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 388 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
||+|+|++++..... . ....++.+++++|+++.||.|+
T Consensus 363 aG~flwi~l~~~~~~-~---~~~~~e~~l~~~ll~~~gV~v~ 400 (496)
T PLN02376 363 AGLFAWMDLRHLLRD-R---NSFESEIELWHIIIDKVKLNVS 400 (496)
T ss_pred ceEEEEEEchhhhcc-C---CchhHHHHHHHHHHHcCCEEEe
Confidence 999999999753210 0 0112357899999998899874
No 64
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=6.4e-46 Score=346.00 Aligned_cols=319 Identities=28% Similarity=0.483 Sum_probs=291.0
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 174 (429)
.+++.|++.+.||++||++++++.+.+..+..+|+ .+..++.++|++|.+++++..+.++.|++++|.-.++..++++
T Consensus 25 ~DvlPmWVADMDf~~pp~i~~Al~~rvdhGvfGY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~ 102 (388)
T COG1168 25 EDVLPMWVADMDFPTPPEIIEALRERVDHGVFGYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRA 102 (388)
T ss_pred CCcceeeeecccCCCCHHHHHHHHHHHhcCCCCCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHH
Confidence 57999999999999999999999999999888885 6788999999999999999999999999999999999999999
Q ss_pred hcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCC-CCCCCCCHHHHHhhccc-CCcEEEEcCCCCCccCCCCHHHHHH
Q 014172 175 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRI-SENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDE 252 (429)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~~d~e~l~~~l~~-~~~~i~l~~p~NPtG~~~~~~~l~~ 252 (429)
+.++||.|++..|.|+++....+..|.+++..|+.. ++.|.+|.++|++++.+ ++|++++||||||||.+.++|++.+
T Consensus 103 ~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~ 182 (388)
T COG1168 103 LTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRK 182 (388)
T ss_pred hCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHHH
Confidence 999999999999999999999999999999999874 45588899999998865 5699999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCC-CCceEEEeccChhcccccceeeEEEcC-HHHHHH-HHHHhh
Q 014172 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM-WERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAA-CNKIQS 329 (429)
Q Consensus 253 I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~R~G~v~~~-~~~~~~-l~~~~~ 329 (429)
|.++|.+| |+.||+||+|+++++.|+.+.++.++... .++.|++.|-||+|+++|+++++++.+ +++..+ ++++..
T Consensus 183 i~elc~kh-~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~ 261 (388)
T COG1168 183 IAELCLRH-GVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLKR 261 (388)
T ss_pred HHHHHHHc-CCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHHHHH
Confidence 99999999 99999999999999999888888876543 588999999999999999999998864 555444 445566
Q ss_pred cccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc-CCCceeecCCceEEEEEecCCccCCcccCCC
Q 014172 330 QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFG 408 (429)
Q Consensus 330 ~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~ 408 (429)
....++|.++..|..++++. ++.|++++.+.++.+++++.+.+.+ +|++++..|+|.|.+|+++.++ +
T Consensus 262 ~~~~~~n~lg~~A~~aAY~~---G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r~l-~------- 330 (388)
T COG1168 262 NGLHGPSALGIIATEAAYNQ---GEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAWLDCREL-G------- 330 (388)
T ss_pred hcCCCCchHHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCCCceeeeeecccc-C-------
Confidence 67778999999999999998 7999999999999999999999998 6999999999999999999876 2
Q ss_pred CCCChHHHHHHHHHhCCeecC
Q 014172 409 KIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 409 ~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
.+..++.+.|+++.+|+++
T Consensus 331 --l~d~~l~~~ll~~akVal~ 349 (388)
T COG1168 331 --LDDSELAEFLLEEAKVALS 349 (388)
T ss_pred --CChHHHHHHHHHhhcEecc
Confidence 3668999999999999875
No 65
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.2e-46 Score=370.81 Aligned_cols=299 Identities=21% Similarity=0.346 Sum_probs=257.0
Q ss_pred cCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHH
Q 014172 93 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 172 (429)
Q Consensus 93 ~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l 172 (429)
.+.++|+|+.|+|++++|+.+++++.+.+.. ...| |..|..+||++|++++. +++++|++|+|+++++.+++
T Consensus 27 ~~~~~i~l~~nen~~~~~~~v~~a~~~~~~~-~~~Y-p~~g~~~Lr~aia~~~~------~~~~~I~vt~Gs~e~i~~~~ 98 (366)
T PRK01533 27 GDHSFVKLASNENPFGCSPRVLDELQKSWLD-HALY-PDGGATTLRQTIANKLH------VKMEQVLCGSGLDEVIQIIS 98 (366)
T ss_pred CCCceEEeCCCCCCCCCCHHHHHHHHHHHHh-cCcC-CCCCHHHHHHHHHHHhC------CCcceEEECCCHHHHHHHHH
Confidence 3457999999999999999999999887654 3346 77899999999999973 68899999999999999999
Q ss_pred HHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHH
Q 014172 173 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 252 (429)
Q Consensus 173 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~ 252 (429)
++++++||+|++++|+|+.|...++..|++++.++++ ++.+|++.++++++++++++++|+||||||.+++.+++++
T Consensus 99 ~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~---~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~~~l~~ 175 (366)
T PRK01533 99 RAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN---NGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDRKLTQ 175 (366)
T ss_pred HHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC---CCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCHHHHHH
Confidence 9999999999999999999999999999999999984 3458999999999889999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhccc
Q 014172 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFT 332 (429)
Q Consensus 253 I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~ 332 (429)
|+++|+++ ++ +|+||+|.++.+.+... +........+++|+++||||.||++|+|+||+++++++++.+.+... .
T Consensus 176 l~~~~~~~-~~-~iiDe~y~~~~~~~~~~-~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~~~~l~~~~~--~ 250 (366)
T PRK01533 176 FIEGISEN-TL-IVIDEAYYEYVTAKDFP-ETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHEELIEKLNVVRL--P 250 (366)
T ss_pred HHHhCCCC-CE-EEEEccHHHhhccccCc-chhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCHHHHHHHHHhcC--C
Confidence 99999887 65 56699999887654222 22222223579999999999999999999999999999999988754 3
Q ss_pred CCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCC
Q 014172 333 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN 412 (429)
Q Consensus 333 ~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~ 412 (429)
.+++.++|.++.++|++ .+|+++.++.++++|+.+.+.++.+ |+++.+|+++ |+|++++ +
T Consensus 251 ~~~~~~~q~aa~~~l~~----~~~~~~~~~~~~~~r~~~~~~l~~~-g~~~~~~~~n-f~~~~~~--------------~ 310 (366)
T PRK01533 251 FNVSSLAQKAATIAFGD----DEFIEEIVRVNTEGLRQYESFCKEN-EIPFYQSQTN-FIFLPVE--------------N 310 (366)
T ss_pred CCcCHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHHHhC-CCccCCCcCc-EEEEeCC--------------C
Confidence 57899999999999974 7888889999999999999999888 8888777655 6999885 3
Q ss_pred hHHHHHHHHHhCCeec
Q 014172 413 SESLCRYLLDKAQVLL 428 (429)
Q Consensus 413 ~~~~~~~Ll~~~gV~v 428 (429)
+.++.+.|+++ ||.|
T Consensus 311 ~~~~~~~l~~~-GI~V 325 (366)
T PRK01533 311 GGEIYEACAHA-GFII 325 (366)
T ss_pred HHHHHHHHHHC-CcEE
Confidence 56888888764 9876
No 66
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.6e-46 Score=366.93 Aligned_cols=304 Identities=24% Similarity=0.374 Sum_probs=255.4
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcC--CCCCCCCCCCHHHHHHHHHHHHhhc--CCCCCCCcEEEecChHHHHHHH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREG--FTRYTPNAGTLELRSAICHKLKEEN--GLSYTPDQILVSNGAKQSILQA 171 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~l~~~~--g~~~~~~~i~~t~G~~~al~~~ 171 (429)
.+++|+.|+|++++|+.+.+++.+++..+ ...| |..|..+||++||+++++.+ |+.+++++|++|+|+++++..+
T Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y-~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~ 107 (374)
T PRK02610 29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRY-PDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSL 107 (374)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhcccccCC-CCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHH
Confidence 48999999999999999999999887654 3568 56799999999999998776 5668899999999999999988
Q ss_pred HHHhcCCCC-EEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc----cCCcEEEEcCCCCCccCCCC
Q 014172 172 VLAVCSPGD-EVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSNPTGSVYP 246 (429)
Q Consensus 172 l~~l~~~gd-~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~----~~~~~i~l~~p~NPtG~~~~ 246 (429)
+.+++.+|| .|++++|+|..|...++..|++++.++++. +++++|+++++++++ .++|+|++++||||||.+++
T Consensus 108 ~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s 186 (374)
T PRK02610 108 LIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDP-ETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLT 186 (374)
T ss_pred HHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCc-ccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCC
Confidence 888888886 899999999999999999999999999853 458899999999886 48999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHH
Q 014172 247 KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK 326 (429)
Q Consensus 247 ~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~ 326 (429)
.+++++|.++| + +++||+||+|.+|.+.. .+..+.. .+++|+++||||.||++|+|+||+++++++++.+.+
T Consensus 187 ~~~l~~l~~~~--~-~~~iI~De~Y~~~~~~~----~~~~~~~-~~~~ivi~SfSK~~g~~GlRiG~~v~~~~l~~~l~~ 258 (374)
T PRK02610 187 AAELEWLRSLP--E-DILVVIDEAYFEFSQTT----LVGELAQ-HPNWVILRTFSKAFRLAAHRVGYAIGHPELIAVLEK 258 (374)
T ss_pred HHHHHHHHhcc--C-CcEEEEeccccccCccc----hHHHHhc-CCCEEEEEecchhccCcccceeeeecCHHHHHHHHH
Confidence 99999999886 5 89999999999875421 1222222 467899999999999999999999999999999988
Q ss_pred HhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccC
Q 014172 327 IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEG 406 (429)
Q Consensus 327 ~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~ 406 (429)
.... .+.+.+.|.++..++.. .+.+.+.+++.++ +|+.+.+.|++++++.+ .|++|+|+|++++..
T Consensus 259 ~~~~--~~~~~~~q~a~~~~l~~---~~~~~~~~~~~~~-~r~~l~~~L~~~~~~~~-~p~~g~f~~~~l~~~------- 324 (374)
T PRK02610 259 VRLP--YNLPSFSQLAAQLALEH---RQELLAAIPEILQ-ERDRLYQALQELPQLRV-WPSAANFLYLRLSQD------- 324 (374)
T ss_pred hcCC--CCCCHHHHHHHHHHhcC---HHHHHHHHHHHHH-HHHHHHHHHHhCCCcEe-CCCcceEEEEeCCCC-------
Confidence 7643 45789999999999875 3566666666655 47778899988878875 488899999999753
Q ss_pred CCCCCChHHHHHHHHHhCCeec
Q 014172 407 FGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 407 ~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.++.++++.|. ++||.|
T Consensus 325 ----~~~~~~~~~l~-~~gi~v 341 (374)
T PRK02610 325 ----AALAALHQALK-AQGTLV 341 (374)
T ss_pred ----CCHHHHHHHHH-HCCEEE
Confidence 26788988875 458876
No 67
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=6.1e-46 Score=373.43 Aligned_cols=324 Identities=21% Similarity=0.370 Sum_probs=268.4
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHH------------cCCCCCCCCCCCHHHHHHHHHHHHhhcCC--CCCCCcEEEe
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIR------------EGFTRYTPNAGTLELRSAICHKLKEENGL--SYTPDQILVS 161 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~------------~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~--~~~~~~i~~t 161 (429)
.+|+|+..++.+. .+++.+.+.+... +....|.+..|.++||+++|+++++.+|. ++++++|++|
T Consensus 48 g~i~l~~aeN~l~-~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit 126 (447)
T PLN02607 48 GVIQMGLAENQVS-FDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIVLT 126 (447)
T ss_pred ceEEEechhhhhh-HHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEc
Confidence 4899999998763 4556665555322 11245878889999999999999988773 5889999999
Q ss_pred cChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHH-HcCCEEEEecCCCCCCCCCCHHHHHhhccc------CCcEEEE
Q 014172 162 NGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR-IADATPVILPTRISENFLLDPKVLESKLTE------KSRLLIL 234 (429)
Q Consensus 162 ~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~~~~i~l 234 (429)
+|+++++.+++.++++|||.|+++.|+|+.+...+. ..|++++.|+++.+++|.+|++.++++++. ++|+|++
T Consensus 127 ~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll 206 (447)
T PLN02607 127 AGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLI 206 (447)
T ss_pred CChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEE
Confidence 999999999999999999999999999999998777 579999999988777788999999998863 7899999
Q ss_pred cCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCC------CCCCceEEEeccChhccccc
Q 014172 235 CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP------GMWERTLTVNGFSKAFAMTG 308 (429)
Q Consensus 235 ~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~------~~~~~~i~~~S~SK~~~~~G 308 (429)
+|||||||.+++++++++|+++|++| +++||+||+|..+.|++....++.++. ...+++++++||||.||++|
T Consensus 207 ~nP~NPtG~~~s~e~l~~l~~~~~~~-~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~G 285 (447)
T PLN02607 207 TNPSNPLGATVQRSVLEDILDFVVRK-NIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPG 285 (447)
T ss_pred eCCCCCcCcccCHHHHHHHHHHHHHC-CCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCc
Confidence 99999999999999999999999999 999999999999988765555665431 12578999999999999999
Q ss_pred ceeeEEEc-CHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCC
Q 014172 309 WRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 387 (429)
Q Consensus 309 ~R~G~v~~-~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~ 387 (429)
+|+||+++ ++++++.+...... .+++.+.|.++..+|.+....+.++...+++++++++.+.+.|++. |+.+.+++
T Consensus 286 lRvG~ivs~n~~l~~~~~~~~~~--~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~~~~~~ 362 (447)
T PLN02607 286 FRVGTIYSYNDKVVTTARRMSSF--TLVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIECLKGN 362 (447)
T ss_pred ceEEEEEEcCHHHHHHHHHHhhc--CCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcccCC
Confidence 99999998 67777777655322 2468889999999998744334678889999999999999999997 88888999
Q ss_pred ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 388 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
+|+|+|++++...... ....+.+++++|++++||.|.
T Consensus 363 ag~fvw~~L~~~~~~~-----~~~~e~~l~~~ll~~~gV~v~ 399 (447)
T PLN02607 363 AGLFCWMNLSPLLETP-----TREGELALWDSILREVKLNIS 399 (447)
T ss_pred eeEEEEEEchHhhcCC-----CchhHHHHHHHHHHhCCEEEc
Confidence 9999999998642100 012356889999998899863
No 68
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=1.3e-45 Score=371.83 Aligned_cols=320 Identities=22% Similarity=0.323 Sum_probs=247.6
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHH-HHHHhhcCCCC-CCC--cEEEecChHHHHHHH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAIC-HKLKEENGLSY-TPD--QILVSNGAKQSILQA 171 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia-~~l~~~~g~~~-~~~--~i~~t~G~~~al~~~ 171 (429)
++|+|+.|+|++++| +++.++.+.+.. . +|+++.|..+++++++ +++.+.++... .++ +|++|+|+++++..+
T Consensus 95 ~~i~l~~g~p~~~~~-~~~~~~~~~~~~-~-~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~ 171 (521)
T TIGR03801 95 DIISYVIDQLGFDPD-AFLYEMCDGIIG-D-NYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYI 171 (521)
T ss_pred HHHhhcCCCCCCCCC-HHHHHHHHHhhc-C-CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHH
Confidence 479999999999965 444666665432 2 5877778888888877 56666654333 333 899999999999998
Q ss_pred HHH-----hcCCCCEEEEcCCCCCChHHHHHHc--CCEEEEecCCCCCC-----CCCCHHHHHhhcccCCcEEEEcCCCC
Q 014172 172 VLA-----VCSPGDEVIIPAPFWVSYPEMARIA--DATPVILPTRISEN-----FLLDPKVLESKLTEKSRLLILCSPSN 239 (429)
Q Consensus 172 l~~-----l~~~gd~Vlv~~p~y~~~~~~~~~~--g~~~~~v~~~~~~~-----~~~d~e~l~~~l~~~~~~i~l~~p~N 239 (429)
+.+ +++|||+|++++|+|+.|...++.. |++++.++.+++++ |.+|++++++++++++|+|++++|||
T Consensus 172 ~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~kai~l~nP~N 251 (521)
T TIGR03801 172 FDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIKALFVVNPSN 251 (521)
T ss_pred HHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCcEEEEeCCCC
Confidence 887 7899999999999999999998876 67888888765443 89999999999889999999999999
Q ss_pred CccCCCCHHHHHHHHHHHHhC-CCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCH
Q 014172 240 PTGSVYPKNLLDEIARIVAKH-PRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK 318 (429)
Q Consensus 240 PtG~~~~~~~l~~I~~~a~~~-~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~ 318 (429)
|||.+++.+++++|+++|++| ++++||+||+|..|.+ .+.++... ..+++|+++||||.||++|||+||+++++
T Consensus 252 PTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~sl~~~--~~~~vI~v~SfSK~fg~~G~RlG~i~~~~ 326 (521)
T TIGR03801 252 PPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD---DFRSLFAE--LPYNTIGVYSFSKYFGATGWRLGTIALHK 326 (521)
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc---cccchhhh--CCCCEEEEEcchhhccCchhhhhhhhcCc
Confidence 999999999999999999974 4899999999999875 23344443 24799999999999999999999999976
Q ss_pred H-----HHH--------HH------------------------HHHhhcccCCCchHHHH-----HHHHHHhcCCCChHH
Q 014172 319 H-----FVA--------AC------------------------NKIQSQFTSGASSISQK-----AGVAALGLGYAGGEV 356 (429)
Q Consensus 319 ~-----~~~--------~l------------------------~~~~~~~~~~~~~~~q~-----aa~~~l~~~~~~~~~ 356 (429)
+ +++ .+ +++....+.+.+.+.|. ++.++++. ..++
T Consensus 327 ~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~---~~~y 403 (521)
T TIGR03801 327 DNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDK---ENAY 403 (521)
T ss_pred hHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhcc---chhH
Confidence 4 221 11 34555666778888776 34445554 4678
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCC-cccCC----CCCCChHHHHHHHHHhCCeec
Q 014172 357 VSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGS-EAEGF----GKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 357 ~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~-~~~~~----~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++++++.|++||+.+.+.| .+ .+...+|+|+||+|++++..... ....| ....++.+|+.+|++++||++
T Consensus 404 ~~~~~~~~~~R~~~l~~~L-g~-~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v 478 (521)
T TIGR03801 404 KAETKDICRRREKLLFRGL-GL-PLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVL 478 (521)
T ss_pred HHHHHHHHHHHHHHHHHhc-CC-CCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEE
Confidence 9999999999999999998 22 23345799999999999853100 00000 001257899999999999986
No 69
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=4.2e-45 Score=358.89 Aligned_cols=300 Identities=23% Similarity=0.422 Sum_probs=256.7
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHH
Q 014172 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (429)
Q Consensus 94 g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~ 173 (429)
+.++++|+.|+|++++|+.+.+++.+.+.. ..+| |..+..+||+++++++. +++++|++|+|+++++..+++
T Consensus 18 ~~~~~~l~~~~~~~~~p~~~~~a~~~~~~~-~~~Y-~~~~~~~lr~~ia~~~~------~~~~~i~it~Ga~~~l~~~~~ 89 (354)
T PRK06358 18 KNMILDFSANINPLGVPESLKQAITENLDK-LVEY-PDPDYLELRKRIASFEQ------LDLENVILGNGATELIFNIVK 89 (354)
T ss_pred ccceEEecCCCCCCCCCHHHHHHHHHHHHh-hhcC-CCccHHHHHHHHHHHhC------CChhhEEECCCHHHHHHHHHH
Confidence 345799999999988899999999987753 5678 45678999999999973 688999999999999999988
Q ss_pred HhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHH
Q 014172 174 AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEI 253 (429)
Q Consensus 174 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I 253 (429)
++ .+ +.|++++|+|+.|...++..|++++.++++.+++|.+| +++.+.+.++++++++++||||||.+++.+++++|
T Consensus 90 ~~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~l 166 (354)
T PRK06358 90 VT-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLISKEEMKKI 166 (354)
T ss_pred Hh-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCCccCHHHHHHH
Confidence 86 44 68999999999999999999999999999766778899 66666677789999999999999999999999999
Q ss_pred HHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcC-HHHHHHHHHHhhccc
Q 014172 254 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQFT 332 (429)
Q Consensus 254 ~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~-~~~~~~l~~~~~~~~ 332 (429)
+++|++| +++||+||+|.+|.+++.....+..++ ..+++|+++||||.||++|+|+||++++ +++++.+.+....
T Consensus 167 ~~~a~~~-~~~ii~De~Y~~~~~~~~~~~~~~~~~-~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~~-- 242 (354)
T PRK06358 167 LDKCEKR-NIYLIIDEAFMDFLEENETISMINYLE-NFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMREP-- 242 (354)
T ss_pred HHHHHhc-CCEEEEeCcccccCCCccchhHHHhcc-CCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCC--
Confidence 9999999 999999999999988764332233333 3589999999999999999999999985 6788888877653
Q ss_pred CCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCC
Q 014172 333 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN 412 (429)
Q Consensus 333 ~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~ 412 (429)
.+.+.+.|.++..+|+. .+++++.++.++++|+.+.+.|++++|+++.+|+|+ |+|++++ +
T Consensus 243 ~~~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~-f~~~~~~--------------~ 303 (354)
T PRK06358 243 WSINTFADLAGQTLLDD----KEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSVN-FIFFKLE--------------K 303 (354)
T ss_pred CcchHHHHHHHHHHhcc----HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCcce-EEEEEcC--------------c
Confidence 45789999999999974 678889999999999999999999888888888776 7899987 3
Q ss_pred hHHHHHHHHHhCCeec
Q 014172 413 SESLCRYLLDKAQVLL 428 (429)
Q Consensus 413 ~~~~~~~Ll~~~gV~v 428 (429)
..+|+++|+++ ||.|
T Consensus 304 ~~~~~~~l~~~-gI~v 318 (354)
T PRK06358 304 PIDLRKELLKK-GILI 318 (354)
T ss_pred hHHHHHHHHHC-CeEE
Confidence 47899998875 8876
No 70
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6e-44 Score=355.75 Aligned_cols=322 Identities=30% Similarity=0.482 Sum_probs=267.4
Q ss_pred hHHHHHHHHHHHhc--CCCeEEcCCCCCCCCChHHHHHHHHHHHHcC---CCCCCCCCCCHHHHHHHHHHHHhhcCCCCC
Q 014172 80 TVAITDQATALAQA--GVSVIRLAAGEPDFDTPVLIAEAGINAIREG---FTRYTPNAGTLELRSAICHKLKEENGLSYT 154 (429)
Q Consensus 80 ~~~~~~~~~~~~~~--g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~ 154 (429)
++.+.+.+..+... ..++++|+.|.|++++|+.+.+++.+.++.. ..+|++..|.+++|+++++++.+.++..++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~ 95 (394)
T PRK06836 16 IRKMFEEGARLKAEYGADNVFDFSLGNPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLT 95 (394)
T ss_pred HHHHHHHHHHHHhhcCCCCeEEecCcCCCCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence 34444444443322 3468999999998888899999998877642 467988999999999999999998888889
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEE
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLIL 234 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l 234 (429)
+++|++|+|+++++..+++.++++||.|++++|+|..|...++..|++++.++++++ ++.+|+++++++++++++++++
T Consensus 96 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~~~~~~~~v~~ 174 (394)
T PRK06836 96 ADHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTD-TFQPDLDALEAAITPKTKAVII 174 (394)
T ss_pred cCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCc-cCcCCHHHHHhhcCcCceEEEE
Confidence 999999999999999999999999999999999999999999999999999998753 4679999999999989999999
Q ss_pred cCCCCCccCCCCHHHHHHHHHHHHh------CCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccccc
Q 014172 235 CSPSNPTGSVYPKNLLDEIARIVAK------HPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG 308 (429)
Q Consensus 235 ~~p~NPtG~~~~~~~l~~I~~~a~~------~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 308 (429)
++||||||.+++.+++++|+++|++ | |++||+||+|.++.|++....++.. ..+++++++||||.||++|
T Consensus 175 ~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~---~~~~~i~~~S~SK~~~~pG 250 (394)
T PRK06836 175 NSPNNPTGVVYSEETLKALAALLEEKSKEYGR-PIYLISDEPYREIVYDGAEVPYIFK---YYDNSIVVYSFSKSLSLPG 250 (394)
T ss_pred eCCCCCCCcCCCHHHHHHHHHHHHHhhhccCC-CeEEEEeccccccccCCCCCCChHH---ccCcEEEEecchhhccCcc
Confidence 9999999999999999999999999 8 9999999999999887543333332 2578999999999999999
Q ss_pred ceeeEEEcCHHHHHH---HHH---Hhhc-ccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCc
Q 014172 309 WRLGYIAGPKHFVAA---CNK---IQSQ-FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV 381 (429)
Q Consensus 309 ~R~G~v~~~~~~~~~---l~~---~~~~-~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~ 381 (429)
+|+||+++++++.+. +.. .... ...+++.+.|.++..++.. . ..++.|+++|+.+.+.|+++ |+
T Consensus 251 lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~----~~~~~~~~~r~~l~~~L~~~-g~ 321 (394)
T PRK06836 251 ERIGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDA----T----VDVSIYKRNRDLLYDGLTEL-GF 321 (394)
T ss_pred eeeEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCC----h----HHHHHHHHHHHHHHHHHHhC-CC
Confidence 999999998876432 111 1121 1235788899998888875 1 13567889999999999998 89
Q ss_pred eeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 382 KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 382 ~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++..|++|||+|++++.. +..++++.|. ++||.|
T Consensus 322 ~~~~~~gg~~~~~~~~~~------------~~~~~~~~l~-~~gv~v 355 (394)
T PRK06836 322 ECVKPQGAFYLFPKSPEE------------DDVAFCEKAK-KHNLLL 355 (394)
T ss_pred EeecCCceEEEEEeCCCC------------CHHHHHHHHH-hCCEEE
Confidence 988999999999998752 6788987765 559875
No 71
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=9e-45 Score=359.59 Aligned_cols=322 Identities=23% Similarity=0.310 Sum_probs=261.8
Q ss_pred CcccccccCCc-hhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHH
Q 014172 68 LSPRVNAVKPS-KTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLK 146 (429)
Q Consensus 68 ~s~~~~~~~~~-~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~ 146 (429)
+.+.+.++.++ ....+...++++...+.++|+|+.|+|++++|+.+.+++.+.. ....| |..+..+||++|+++++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~n~~p~~~~~~v~~a~~~~~--~~~~Y-p~~~~~~lr~~ia~~~~ 100 (380)
T PLN03026 24 IRKHILQLAPYQPILPFEVLSAQLGRKPEDIVKLDANENPYGPPPEVLEALGNMK--FPYVY-PDPESRRLRAALAEDSG 100 (380)
T ss_pred hhHHhhcCCCCCCCCChHHHHHHhCCCccceEEccCCCCCCCCCHHHHHHHHhhH--hhccC-CCCCHHHHHHHHHHHhC
Confidence 44555555554 2223334444444445689999999999999888888876531 12456 55678999999999974
Q ss_pred hhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhc-
Q 014172 147 EENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL- 225 (429)
Q Consensus 147 ~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l- 225 (429)
+++++|++|+|+++++..++.+++++||+|++++|+|..|...++..|++++.++.+ ++|.+|++.+++.+
T Consensus 101 ------~~~~~I~~t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~ 172 (380)
T PLN03026 101 ------LESENILVGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRT--PDFSLDVPRIVEAVE 172 (380)
T ss_pred ------cChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHHHHHHHHh
Confidence 578999999999999999999999999999999999999999999999999999985 35779999999998
Q ss_pred ccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcc
Q 014172 226 TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 305 (429)
Q Consensus 226 ~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 305 (429)
++++++|++++||||||.+++.+++++|++. .++||+||+|.+|.+.+. ........+++|+++||||.||
T Consensus 173 ~~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~-----~~~vi~DeaY~~~~~~~~----~~~~~~~~~~viv~~SfSK~~g 243 (380)
T PLN03026 173 THKPKLLFLTSPNNPDGSIISDDDLLKILEL-----PILVVLDEAYIEFSTQES----RMKWVKKYDNLIVLRTFSKRAG 243 (380)
T ss_pred ccCCcEEEEeCCCCCCCCCCCHHHHHHHHhc-----CCEEEEECcchhhcCCcc----hHHHHHhCCCEEEEecchHhhc
Confidence 6789999999999999999997777766653 379999999999876432 1122223589999999999999
Q ss_pred cccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeec
Q 014172 306 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 385 (429)
Q Consensus 306 ~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~ 385 (429)
++|+|+||+++++++++.+.+.... .+.+.++|.++.++|++ .+++++.++.++++|+.+.+.|++++++.+ .
T Consensus 244 laGlRiGy~~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~aL~~----~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~ 316 (380)
T PLN03026 244 LAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALSN----PKYLEDVKNALVEERERLFGLLKEVPFLEP-Y 316 (380)
T ss_pred CccccceeeecCHHHHHHHHHhcCC--CCCCHHHHHHHHHHhhC----HHHHHHHHHHHHHHHHHHHHHHHHCCCCeE-C
Confidence 9999999999999999999887654 45789999999999975 678999999999999999999999855554 5
Q ss_pred CCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 386 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 386 p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|.+++|+|++++.. .++.+++++|++ +||.|
T Consensus 317 p~~~~f~~~~~~~~-----------~~~~~~~~~l~~-~gI~v 347 (380)
T PLN03026 317 PSDANFILCRVTSG-----------RDAKKLKEDLAK-MGVMV 347 (380)
T ss_pred CCCCeEEEEECCCC-----------CCHHHHHHHHHH-CCeEE
Confidence 78889999998742 267899999985 59876
No 72
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.3e-44 Score=353.26 Aligned_cols=305 Identities=23% Similarity=0.380 Sum_probs=255.7
Q ss_pred HHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEec
Q 014172 83 ITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSN 162 (429)
Q Consensus 83 ~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~ 162 (429)
+.+.++.+...+.++|+|+.|++++++|+.+.+++.+.+.. ...|+ ..|..+||++|++++. +++++|++|+
T Consensus 18 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~-~~~~~~lr~~ia~~~~------~~~~~I~it~ 89 (357)
T PRK14809 18 IEEVARELGLDPDDLVKLSSNENPHGPSPAAVEAIREAAER-VHSYP-KASHADLTAALADRWD------VSPEQVWLAN 89 (357)
T ss_pred HHHHHHHhCCCccceeEecCCCCCCCCCHHHHHHHHHHHhh-hhcCC-CCCHHHHHHHHHHHhC------CCcceEEECC
Confidence 33445555445668999999999999999999998887653 56784 5789999999999973 6889999999
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCcc
Q 014172 163 GAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTG 242 (429)
Q Consensus 163 G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG 242 (429)
|+++++.+++++++++||.|++++|+|..|...++..|++++.++++.++++.++++.+++.. +++++|++++||||||
T Consensus 90 G~~~al~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPTG 168 (357)
T PRK14809 90 GGDGALDYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNPTG 168 (357)
T ss_pred CHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCCC
Confidence 999999999999999999999999999999999999999999999876667888999888765 4689999999999999
Q ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHH
Q 014172 243 SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVA 322 (429)
Q Consensus 243 ~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~ 322 (429)
.+++.+++++|+++|+ + +++||+||+|.++.+.+. .+..+ ...+++++++||||.||++|+|+||+++++++++
T Consensus 169 ~~~s~~~~~~l~~~~~-~-~~~iI~De~y~~~~~~~~---~~~~~-~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~ 242 (357)
T PRK14809 169 SEIPLDEVEALAERTD-E-ETLVVVDEAYGEFAERPS---AVALV-EERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWAD 242 (357)
T ss_pred cCCCHHHHHHHHHhCc-c-CcEEEEechhhhccCCch---hHHHH-hhCCCEEEEecchhHhcCcchhheeeecCHHHHH
Confidence 9999999999999986 4 578999999999876431 11112 2357899999999999999999999999999999
Q ss_pred HHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCC
Q 014172 323 ACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGS 402 (429)
Q Consensus 323 ~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~ 402 (429)
.+.+... ..+.+.++|.++..+|.. .+++++.++.++++|+.+.+.|+.. + .|.+|+|+|++++
T Consensus 243 ~~~~~~~--~~~~~~~~~~~a~~~l~~----~~~~~~~~~~~~~~r~~l~~~L~~~-~----~~~~g~f~~~~~~----- 306 (357)
T PRK14809 243 AYARVNT--PFAASELACRAGLAALDD----DEHVERTVETARWAREYIREELDAP-T----WESAGNFVLAEVG----- 306 (357)
T ss_pred HHHHhCC--CCCCCHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHhcCc-c----CCCCCCEEEEECC-----
Confidence 9887653 456789999999999874 7889999999999999999999753 2 2577889999884
Q ss_pred cccCCCCCCChHHHHHHHHHhCCeec
Q 014172 403 EAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 403 ~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++.+|++.|. ++||.|
T Consensus 307 ---------~~~~~~~~l~-~~gv~v 322 (357)
T PRK14809 307 ---------DASAVAEAAQ-ERGVIV 322 (357)
T ss_pred ---------CHHHHHHHHH-HCCEEE
Confidence 4678998875 559876
No 73
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=3.9e-44 Score=352.47 Aligned_cols=307 Identities=22% Similarity=0.289 Sum_probs=254.3
Q ss_pred HHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChH
Q 014172 86 QATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAK 165 (429)
Q Consensus 86 ~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~ 165 (429)
.++++...+.++|+|+.|+|++++|+.+++++.+.+.. ...|+ ..+..+||++||+++. +++++|++|+|++
T Consensus 11 ~~~~~~~~~~~~i~l~~~~~~~~~p~~~~~a~~~~~~~-~~~y~-~~~~~~lr~~ia~~~~------~~~~~i~it~Ga~ 82 (356)
T PRK08056 11 AATVLGISPDQLLDFSANINPLGMPVSLKRAIIDNLDC-AERYP-DVEYRHLHQALARHHQ------VPASWILAGNGET 82 (356)
T ss_pred HHHHhCCChhhEEEeccccCCCCCCHHHHHHHHHHHHh-cccCc-CccHHHHHHHHHHHhC------cChhhEEECCCHH
Confidence 34444444567999999999999999999999887754 34674 4578999999999973 5789999999999
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCC
Q 014172 166 QSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVY 245 (429)
Q Consensus 166 ~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~ 245 (429)
+++..+++++ .+|+ +++++|+|..|...++..|++++.+|+++++++.+| +++++.+.+++|+|++++||||||.++
T Consensus 83 ~~l~~~~~~l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~NPTG~~~ 159 (356)
T PRK08056 83 ESIFAVVSGL-KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLP 159 (356)
T ss_pred HHHHHHHHHh-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccCCCCEEEEeCCcCCCCCCC
Confidence 9999998876 6776 677899999999999999999999999766677777 455566778899999999999999999
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEc-CHHHHHHH
Q 014172 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAAC 324 (429)
Q Consensus 246 ~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~-~~~~~~~l 324 (429)
+.+++++|+++|++| +++||+||+|.++.+++....+. +. ..+++++++||||.||++|+|+||+++ ++++++.+
T Consensus 160 ~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~--~~-~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l 235 (356)
T PRK08056 160 ERQLLQAIAERCKSL-NIALILDEAFIDFIPDETGFIPQ--LA-DNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARM 235 (356)
T ss_pred CHHHHHHHHHHHHhc-CCEEEEecchhccCCcchHHHHH--hc-cCCCEEEEEechhhccCcchhheeeecCCHHHHHHH
Confidence 999999999999999 99999999999988754322222 22 246899999999999999999999998 46787877
Q ss_pred HHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcc
Q 014172 325 NKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEA 404 (429)
Q Consensus 325 ~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~ 404 (429)
.+... ..+++.+.|.++..+++. .+++++.++.++++|+.+.+.|++++|+.+.++ +++|+|++++.
T Consensus 236 ~~~~~--~~~~~~~~~~~a~~~l~~----~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~------ 302 (356)
T PRK08056 236 RRQQM--PWSINAFAALAGEVILQD----RAYQQATWQWLAEEGARFYQALCALPLLTVWPG-RANYLFLRCER------ 302 (356)
T ss_pred HHhCC--CCchhHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC-CCcEEEEEcCC------
Confidence 76543 345778889888888863 678888899999999999999998888877655 67889999873
Q ss_pred cCCCCCCChHHHHHHHHHhCCeec
Q 014172 405 EGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 405 ~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++.+++++|++ +||.|
T Consensus 303 -------~~~~~~~~l~~-~gI~v 318 (356)
T PRK08056 303 -------PDIDLQRALLT-QRILI 318 (356)
T ss_pred -------ChHHHHHHHHH-CCeEE
Confidence 46789999886 49876
No 74
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=3.9e-45 Score=360.72 Aligned_cols=316 Identities=30% Similarity=0.539 Sum_probs=273.9
Q ss_pred CeEEcCCCCCCCC----ChHHHHHHHHH--HHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCC-cEEEecChHHHH
Q 014172 96 SVIRLAAGEPDFD----TPVLIAEAGIN--AIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPD-QILVSNGAKQSI 168 (429)
Q Consensus 96 ~~i~L~~g~~~~~----~p~~v~~a~~~--~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~-~i~~t~G~~~al 168 (429)
++|+|+.|+++.. +++++.+++.+ ........|++..|.++||+++++++.+..|++++++ +|++++|+.+++
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~ 81 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL 81 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence 5899999998887 56667777665 3334578999999999999999999998889889999 999999999999
Q ss_pred HHHHHHh-cCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------CCcEEEEcCCCCCc
Q 014172 169 LQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPT 241 (429)
Q Consensus 169 ~~~l~~l-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~~~~i~l~~p~NPt 241 (429)
..++..+ .++||+|++++|+|+.|...++..|++++.++++.++++.+|++.+++.+++ +++++++++|||||
T Consensus 82 ~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPt 161 (363)
T PF00155_consen 82 FLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPT 161 (363)
T ss_dssp HHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTT
T ss_pred hhhhhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccccccc
Confidence 9999999 8899999999999999999999999999999988778889999999999887 57899999999999
Q ss_pred cCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCc-cccCCCCCCceEEEeccChhcccccceeeEEEcCHHH
Q 014172 242 GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS-FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF 320 (429)
Q Consensus 242 G~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~-~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~ 320 (429)
|.+++.+++++|+++|++| +++||+||+|.++.++.....+ ...+.. ..+++++.||||.||++|+|+||+++++++
T Consensus 162 G~~~~~~~l~~l~~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~ 239 (363)
T PF00155_consen 162 GSVLSLEELRELAELAREY-NIIIIVDEAYSDLIFGDPDFGPIRSLLDE-DDNVIVVGSLSKSFGLPGLRVGYIVAPPEL 239 (363)
T ss_dssp TBB--HHHHHHHHHHHHHT-TSEEEEEETTTTGBSSSSHTHHHHGHHTT-TSTEEEEEESTTTTTSGGGTEEEEEEEHHH
T ss_pred ccccccccccchhhhhccc-ccceeeeeceeccccCCCccCcccccccc-cccceeeeeccccccccccccccccchhhh
Confidence 9999999999999999999 9999999999999887543322 222332 455999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCcc
Q 014172 321 VAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYY 400 (429)
Q Consensus 321 ~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~ 400 (429)
++.+......+.. +.+.|.++..++.......++++++++.++++++++.+.|++. |+.+.++++|+|+|+.++..
T Consensus 240 ~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~- 315 (363)
T PF00155_consen 240 IERLRRFQRSGLS--SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVLPPEAGFFLWVRLDPN- 315 (363)
T ss_dssp HHHHHHHHHHTTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHSBSSEEEEEESHH-
T ss_pred hhhhhhccccccc--cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhheeeccCccEEEEEcccc-
Confidence 9999988776654 8888888888887621112388999999999999999999998 99999999999999999753
Q ss_pred CCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 401 GSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++.+++++|++++||.+
T Consensus 316 -----------~~~~l~~~L~~~~gi~v 332 (363)
T PF00155_consen 316 -----------DAEELAQELLEEYGILV 332 (363)
T ss_dssp -----------HHHHHHHHHHHHHTEEE
T ss_pred -----------hHHHHHHHHHHhCCEEE
Confidence 57899999999988875
No 75
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.6e-44 Score=352.54 Aligned_cols=302 Identities=27% Similarity=0.413 Sum_probs=256.1
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHc---CCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIRE---GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 172 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~---~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l 172 (429)
..|+|+.|+|++++|+.+.+++.+.+.. ....| |..|.++||++|++|+++.+|.++++++|++|+|+++++.+++
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y-~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~ 105 (368)
T PRK03317 27 VPVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRY-PDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLL 105 (368)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccC-CCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHH
Confidence 4699999999999999999999988753 34678 5678999999999999999998899999999999999999999
Q ss_pred HHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc-cCCcEEEEcCCCCCccCCCCHHHHH
Q 014172 173 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLD 251 (429)
Q Consensus 173 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~-~~~~~i~l~~p~NPtG~~~~~~~l~ 251 (429)
++++++||.|+++.|+|..|...++..|.+++.++.. +++.+|++.+++++. .++++|++++||||||.+++.++++
T Consensus 106 ~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~ 183 (368)
T PRK03317 106 QAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPRA--ADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVE 183 (368)
T ss_pred HHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEcccC--CCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHH
Confidence 9999999999999999999999999999999888763 457899999999986 4789999999999999999977776
Q ss_pred HHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcc
Q 014172 252 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 331 (429)
Q Consensus 252 ~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~ 331 (429)
+|+++| ++++|+||+|.+|.+.+. .+...+....+++++++||||.||++|+|+||+++++++++.+.....
T Consensus 184 ~l~~~~----~~~lI~DE~y~~~~~~~~--~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~~~~l~~~~~-- 255 (368)
T PRK03317 184 AILDAA----PGIVVVDEAYAEFRRSGT--PSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPAVVDALRLVRL-- 255 (368)
T ss_pred HHHHHC----CceEEEeCCchhhcccCC--cCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCHHHHHHHHhcCC--
Confidence 666655 689999999999876552 222333222468999999999999999999999999999999887653
Q ss_pred cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCC
Q 014172 332 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 411 (429)
Q Consensus 332 ~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~ 411 (429)
..+.+.++|.++.++|+. .+++.+.++.++++|+.+.+.|++. |+++.+|+++|++|.+++
T Consensus 256 ~~~~s~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~-------------- 316 (368)
T PRK03317 256 PYHLSAVTQAAARAALRH----ADELLASVAALRAERDRVVAWLREL-GLRVAPSDANFVLFGRFA-------------- 316 (368)
T ss_pred CCCCCHHHHHHHHHHhhC----HHHHHHHHHHHHHHHHHHHHHHHHC-CCEeCCCCCcEEEEeccC--------------
Confidence 446889999999999975 3445566677899999999999987 888888999999887663
Q ss_pred ChHHHHHHHHHhCCeec
Q 014172 412 NSESLCRYLLDKAQVLL 428 (429)
Q Consensus 412 ~~~~~~~~Ll~~~gV~v 428 (429)
++.++++.|+++ ||.|
T Consensus 317 ~~~~~~~~l~~~-Gv~v 332 (368)
T PRK03317 317 DRHAVWQGLLDR-GVLI 332 (368)
T ss_pred CHHHHHHHHHHC-CEEE
Confidence 467888888765 9876
No 76
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.2e-44 Score=352.85 Aligned_cols=298 Identities=22% Similarity=0.349 Sum_probs=256.6
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 174 (429)
.++|+|+.|+|++++++.+.+++.+.+.. ..|.|..|..++|+++++++. +++++|++|+|+++++..++++
T Consensus 29 ~~~i~l~~n~~~~~~~~~v~~a~~~~~~~--~~~~p~~g~~~lr~~ia~~~~------~~~~~i~~t~G~~~~l~~~~~~ 100 (359)
T PRK03158 29 EKIVKLASNENPYGPSPKVKEAIAAHLDE--LALYPDGYAPELRTKVAKHLG------VDEEQLLFGAGLDEVIQMISRA 100 (359)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHH--hhcCCCCcHHHHHHHHHHHhC------CCHHHEEECCCHHHHHHHHHHH
Confidence 36899999999998888999999887754 456688899999999999983 5788999999999999999999
Q ss_pred hcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHH
Q 014172 175 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 254 (429)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~ 254 (429)
++++||.|++++|+|+.|...+...|++++.+|++ ++.+|++.+++.++++++++++++||||||.+++.+++.+|+
T Consensus 101 ~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~~~ 177 (359)
T PRK03158 101 LLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEELLSFL 177 (359)
T ss_pred HhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999985 356899999999988999999999999999999999888888
Q ss_pred HHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCC
Q 014172 255 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG 334 (429)
Q Consensus 255 ~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~ 334 (429)
+.|+ + +++||+||+|.++.+++.....+..+ ...+++++++||||.||++|+|+||+++++++++.+.+.... .+
T Consensus 178 ~~~~-~-~~~ii~De~y~~~~~~~~~~~~~~~~-~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~~--~~ 252 (359)
T PRK03158 178 ESVP-S-HVLVVLDEAYYEYVTAEDYPDTLPLL-EKYENLIVLRTFSKAYGLAALRVGYGIASEELIEKLNIARPP--FN 252 (359)
T ss_pred HhCC-C-CcEEEEECchHhhcCCcccccHHHHH-HhcCCEEEEEechHhhcCcchhhehhcCCHHHHHHHHHhcCC--CC
Confidence 8774 7 89999999999988765322222222 235789999999999999999999999999999999877653 46
Q ss_pred CchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChH
Q 014172 335 ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSE 414 (429)
Q Consensus 335 ~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 414 (429)
++.++|.++..+|+. .+|+++.++.++++|+.+.+.|+++ |+.+. |.+|+|+|++++. ++.
T Consensus 253 ~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~~~g~~i~~~~~~-------------~~~ 313 (359)
T PRK03158 253 TTRIAQYAAIAALED----QAFLKECVEKNAEGLEQYYAFCKEY-GLFYY-PSQTNFIFVDTGR-------------DAN 313 (359)
T ss_pred CCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHHC-CCeeC-CCcCcEEEEECCC-------------CHH
Confidence 899999999999974 6788888999999999999999988 88776 4456789998852 578
Q ss_pred HHHHHHHHhCCeec
Q 014172 415 SLCRYLLDKAQVLL 428 (429)
Q Consensus 415 ~~~~~Ll~~~gV~v 428 (429)
+++++|+++ ||.|
T Consensus 314 ~~~~~l~~~-gv~v 326 (359)
T PRK03158 314 ELFEALLKK-GYIV 326 (359)
T ss_pred HHHHHHHHC-CeEE
Confidence 999999865 8876
No 77
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=1.6e-43 Score=348.74 Aligned_cols=298 Identities=21% Similarity=0.312 Sum_probs=248.5
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 174 (429)
.++|+|+.|++++++|+.+.+++.+.+.. ..+|++ .+..+||++||+++ + +++++|++|+|++++|.+++++
T Consensus 22 ~~~i~l~~~~n~~~~~~~~~~a~~~~~~~-~~~Y~~-~~~~~Lr~aia~~~----~--v~~~~I~it~G~~~~i~~~~~~ 93 (360)
T PRK07392 22 DAILDFSASINPLGPPESVIAAIQSALSA-LRHYPD-PDYRELRLALAQHH----Q--LPPEWILPGNGAAELLTWAGRE 93 (360)
T ss_pred ccEEEeCCcCCCCCCCHHHHHHHHHHHHH-hhcCCC-cCHHHHHHHHHHHh----C--cChhhEEECCCHHHHHHHHHHH
Confidence 36899999999999999999998887764 567865 45689999999998 3 6889999999999999999888
Q ss_pred hcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCC---CCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHH
Q 014172 175 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENF---LLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLD 251 (429)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~---~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~ 251 (429)
+. +||.|++++|+|..|...++..|++++.++++.++++ ..+++.+++.. ++++++++++||||||.+++++
T Consensus 94 l~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~NPTG~~~~~~--- 168 (360)
T PRK07392 94 LA-QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHNPTGKLWSRE--- 168 (360)
T ss_pred hC-CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCCCCCCCcCHH---
Confidence 65 7899999999999999999999999999999765554 35677776654 4688999999999999999954
Q ss_pred HHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcc
Q 014172 252 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 331 (429)
Q Consensus 252 ~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~ 331 (429)
+|.++++++ ++ +|+||+|.+|.+++. ..++.......+++|+++||||.||++|+|+||+++++++++.+.+...
T Consensus 169 ~l~~l~~~~-~~-~IiDE~y~~~~~~~~-~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~~~~~~-- 243 (360)
T PRK07392 169 AILPLLEQF-AL-VVVDEAFMDFLPPDA-EQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRWQQWRD-- 243 (360)
T ss_pred HHHHHHHHC-CE-EEEECchhhhccCcc-ccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHHHHHHHhhCC--
Confidence 566667788 86 555999999987653 2333332233578999999999999999999999999999988876553
Q ss_pred cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCC
Q 014172 332 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 411 (429)
Q Consensus 332 ~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~ 411 (429)
..+++.++|.++..+|++ .++.++.++.++++|+.+.+.|++++|+.+. |.+++|+|++++.
T Consensus 244 ~~~~s~~~q~~~~~~l~~----~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~~fl~~~~~~------------- 305 (360)
T PRK07392 244 PWPVNGLAAAAAIAALAD----RDFQQQTWAWLPPAREALFQGLASLPGLTPL-PSAANFLLVQSQG------------- 305 (360)
T ss_pred CCCCCHHHHHHHHHHhcc----HHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCCEEEEEcCC-------------
Confidence 356899999999999975 5677888888999999999999988888875 5788999999863
Q ss_pred ChHHHHHHHHHhCCeec
Q 014172 412 NSESLCRYLLDKAQVLL 428 (429)
Q Consensus 412 ~~~~~~~~Ll~~~gV~v 428 (429)
++.+++++|++++||.|
T Consensus 306 ~~~~l~~~ll~~~gv~v 322 (360)
T PRK07392 306 SALQLQEKLLQQHRILI 322 (360)
T ss_pred CHHHHHHHHHhhCCEEE
Confidence 57899999888889986
No 78
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=2.2e-43 Score=354.40 Aligned_cols=314 Identities=18% Similarity=0.314 Sum_probs=249.4
Q ss_pred CCeEEcCCCCCCCCC-h-HHHHHHHHHHHHcC-----CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHH
Q 014172 95 VSVIRLAAGEPDFDT-P-VLIAEAGINAIREG-----FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~-p-~~v~~a~~~~~~~~-----~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~a 167 (429)
.++|+|+.|.|+..+ | +.+.+++.+.+... ..+|++..|.++||++|++++.+.+|+.+++++|++|+|++++
T Consensus 30 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~a 109 (416)
T PRK09440 30 PGAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSA 109 (416)
T ss_pred CCceeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHH
Confidence 468999999987544 3 45667776666432 2579999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcC-----CCCEEEE-cCCCCCChHHHHHHcCC----EEEEecCCCCC-CCCCCHHHHHhhcccCCcEEEEcC
Q 014172 168 ILQAVLAVCS-----PGDEVII-PAPFWVSYPEMARIADA----TPVILPTRISE-NFLLDPKVLESKLTEKSRLLILCS 236 (429)
Q Consensus 168 l~~~l~~l~~-----~gd~Vlv-~~p~y~~~~~~~~~~g~----~~~~v~~~~~~-~~~~d~e~l~~~l~~~~~~i~l~~ 236 (429)
+.++++++++ +||.|++ ++|+|+.|...+...|. .+..+++..++ ++.+|++.++ +.++++++++++
T Consensus 110 l~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~i~l~~ 187 (416)
T PRK09440 110 FFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDEDTGAICVSR 187 (416)
T ss_pred HHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCCCceEEEEec
Confidence 9999999985 6899999 79999999986654442 22233332221 4679999997 456789999999
Q ss_pred CCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccC-CCCCCceEEEeccChhcccccceeeEEE
Q 014172 237 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL-PGMWERTLTVNGFSKAFAMTGWRLGYIA 315 (429)
Q Consensus 237 p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~-~~~~~~~i~~~S~SK~~~~~G~R~G~v~ 315 (429)
||||||.+++.+++++|+++|++| |++||+||+|..+... ..+... +...+++|+++||||. +++|+|+||++
T Consensus 188 P~NPTG~~~s~~~~~~l~~~a~~~-~~~iI~De~Y~~~~~~----~~~~~~~~~~~~~vI~~~SfSK~-~~pGlRiG~~i 261 (416)
T PRK09440 188 PTNPTGNVLTDEELEKLDALARQH-NIPLLIDNAYGPPFPG----IIFSEATPLWNPNIILCMSLSKL-GLPGVRCGIVI 261 (416)
T ss_pred CCCCCCccCCHHHHHHHHHHHHHc-CCcEEEeCCccccCCC----cchhhcCccccCCeEEEeccccc-CCCcceEEEEe
Confidence 999999999999999999999999 9999999999753211 011111 1124789999999996 89999999999
Q ss_pred cCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHH-HHHHHHHHHHHHHHHhcc-CC--CceeecCCceEE
Q 014172 316 GPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK-MVKAFRERRDFLVKSFGE-LE--GVKMSEPQGAFY 391 (429)
Q Consensus 316 ~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~-~~~~~~~~r~~l~~~L~~-l~--g~~~~~p~~~~~ 391 (429)
+++++++.+.........+++.+.|.++..++.++.. ..++.+ +++.|+++++.+.+.|.+ ++ ++.+..|+||+|
T Consensus 262 ~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~f 340 (416)
T PRK09440 262 ADEEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDL-LRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIF 340 (416)
T ss_pred CCHHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceE
Confidence 9999999999888777778999999999999987432 344444 678899999999998876 33 356678999999
Q ss_pred EEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 392 LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 392 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+|++++.. + .++.++++.|. ++||.|
T Consensus 341 iw~~~~~~-~---------~~~~~~~~~l~-~~gV~v 366 (416)
T PRK09440 341 LWLWFKDL-P---------ITTEELYQRLK-ARGVLV 366 (416)
T ss_pred EEEECCCC-C---------CCHHHHHHHHH-HCCEEE
Confidence 99999852 0 25788998775 569876
No 79
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=1e-43 Score=378.46 Aligned_cols=329 Identities=19% Similarity=0.266 Sum_probs=263.8
Q ss_pred cCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCC-CcEEEecChHHHHHHH
Q 014172 93 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTP-DQILVSNGAKQSILQA 171 (429)
Q Consensus 93 ~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-~~i~~t~G~~~al~~~ 171 (429)
+|.++|+|+.|+|++++|+.+.+++.+++... .+ ..|.+++++++++++++.+|++.++ ++|++|+|+++++..+
T Consensus 695 ~g~~vI~LsinE~d~ppPp~V~eAi~eal~~~--~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~ll 770 (1082)
T PLN02672 695 QESSLIHMDVDESFLPVPSAVKASIFESFVRQ--NI--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKL 770 (1082)
T ss_pred CCCCEEEEeCCCCCCCCCHHHHHHHHHHHhhc--CC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHH
Confidence 46789999999999999999999999887542 22 3467889999999999999988765 5899999999999999
Q ss_pred HHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-CCcEEEEcCCC-CCccCCCCHHH
Q 014172 172 VLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPS-NPTGSVYPKNL 249 (429)
Q Consensus 172 l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~p~-NPtG~~~~~~~ 249 (429)
+++++++||.|+++.|+|+.|...++..|++++.+|++++++|.+|++.+++++++ +.++|++++|| ||||.+++.++
T Consensus 771 l~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~ee 850 (1082)
T PLN02672 771 VLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSE 850 (1082)
T ss_pred HHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHH
Confidence 99999999999999999999999999999999999997777899999999999876 45689999997 99999999999
Q ss_pred HHHHHHHHHhCCCeEEEEccCCcccccCCCCC--Cccc----cCCCC--CCceEEEeccChhcccccceeeEEEcCH-HH
Q 014172 250 LDEIARIVAKHPRLLVLSDEIYEHIIYAPATH--TSFA----SLPGM--WERTLTVNGFSKAFAMTGWRLGYIAGPK-HF 320 (429)
Q Consensus 250 l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~--~~~~----~~~~~--~~~~i~~~S~SK~~~~~G~R~G~v~~~~-~~ 320 (429)
+++|+++|++| |++||+||+|.++.|++... .++. .+... ..++++++||||.|+++|||+||+++++ ++
T Consensus 851 Le~Llela~k~-di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eL 929 (1082)
T PLN02672 851 IEEILSVCAKY-GARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVL 929 (1082)
T ss_pred HHHHHHHHHHc-CCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHH
Confidence 99999999999 99999999999999976421 1111 11111 2479999999999999999999999865 58
Q ss_pred HHHHHHHhhcccCCCchHHHHHHHHHHh----cCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEec
Q 014172 321 VAACNKIQSQFTSGASSISQKAGVAALG----LGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDF 396 (429)
Q Consensus 321 ~~~l~~~~~~~~~~~~~~~q~aa~~~l~----~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l 396 (429)
++.+.+..... ++....|.++.+++. ......+++.+.++.|+++|+++.+.|+++ |+++.+|+||||+|+++
T Consensus 930 i~~l~~~~~~s--~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~-Gi~v~~PeGGFfLwl~l 1006 (1082)
T PLN02672 930 IDAFHSAPGLS--RPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC-GWDVLEPQGGISMVAKP 1006 (1082)
T ss_pred HHHHHHhhhhc--CCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEecCCcEEEEEEEc
Confidence 88887754322 233344544444442 110013567788888999999999999998 89999999999999988
Q ss_pred CCccCCcc--cCC----CCCCChHHHHHHHHHhCCeecC
Q 014172 397 STYYGSEA--EGF----GKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 397 ~~~~~~~~--~~~----~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
+.+.+... ... +...++.+|+++|++++||.|.
T Consensus 1007 ~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~ 1045 (1082)
T PLN02672 1007 SAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCIN 1045 (1082)
T ss_pred cccccccccccccccccccCCCHHHHHHHHHHcCCEEEe
Confidence 64322100 000 0013688999999999999863
No 80
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=1.5e-43 Score=349.55 Aligned_cols=294 Identities=21% Similarity=0.291 Sum_probs=252.2
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 174 (429)
++.|+|+.|+|++++|+.+.+++.+.+.. ...|++. +..+||++|++++ | +++++|++|+|+++++..++.+
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~~~Y~~~-~~~~Lr~aia~~~----~--v~~e~I~it~Gs~~ai~~~~~~ 114 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSAAL-SGRYDLE-LEDDLRTLFAAQE----G--LPADHVMAYAGSSEPLNYAVLA 114 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHHHH-hcCCCCc-hHHHHHHHHHHHh----C--cChhhEEEcCChHHHHHHHHHH
Confidence 46899999999999999999999887753 3468554 5899999999876 4 5889999999999999999999
Q ss_pred hcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHH
Q 014172 175 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 254 (429)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~ 254 (429)
++++||+|++++|+|..|...++..|++++.++++. ++.+|++.+++. .++++++++|+||||||.+++.+++++|+
T Consensus 115 l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~~l~~l~ 191 (370)
T PRK09105 115 FTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRA--DGAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPRADIEWLL 191 (370)
T ss_pred HcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCHHHHHHHH
Confidence 999999999999999999999999999999999863 467899999887 56789999999999999999999999999
Q ss_pred HHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCC
Q 014172 255 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG 334 (429)
Q Consensus 255 ~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~ 334 (429)
+.+ ++ +++||+||+|.+|... ++..++....+++++++||||.||++|+|+||+++++++++.+... . ...
T Consensus 192 ~~~-~~-~~~lIvDEaY~~f~~~----~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i~~l~~~-~--~~~ 262 (370)
T PRK09105 192 ANK-PA-GSVLLVDEAYIHFSDA----PSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLLAKLARF-G--HNP 262 (370)
T ss_pred HhC-CC-CcEEEEECchHHhccC----cchHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHHHHHHHhc-C--CCC
Confidence 875 46 7999999999875421 2334443446889999999999999999999999999999988776 2 334
Q ss_pred CchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChH
Q 014172 335 ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSE 414 (429)
Q Consensus 335 ~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 414 (429)
++.+.|.++.++|.+ .+|+++.++.++++|+.+.+.|+++ |+++.+|+++|| |++++. +..
T Consensus 263 ~~~~~~~aa~~~L~~----~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~~f~-~~~~~~-------------~~~ 323 (370)
T PRK09105 263 LPVPAAAAGLASLRD----PKLVPQRRAENAAVREDTIAWLKKK-GYKCTPSQANCF-MVDVKR-------------PAK 323 (370)
T ss_pred cCHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHHHHHHHHC-CCCcCCCCCcEE-EEeCCC-------------CHH
Confidence 788899999999975 6789999999999999999999998 888888888887 577752 678
Q ss_pred HHHHHHHHhCCeec
Q 014172 415 SLCRYLLDKAQVLL 428 (429)
Q Consensus 415 ~~~~~Ll~~~gV~v 428 (429)
+++++|+++ ||.|
T Consensus 324 ~l~~~L~~~-gI~v 336 (370)
T PRK09105 324 AVADAMAKQ-GVFI 336 (370)
T ss_pred HHHHHHHHC-CcEE
Confidence 999999877 9876
No 81
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-43 Score=351.23 Aligned_cols=301 Identities=23% Similarity=0.332 Sum_probs=254.9
Q ss_pred cCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHH
Q 014172 93 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 172 (429)
Q Consensus 93 ~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l 172 (429)
.+.++|+|+.|+|++.+|+.+.+++.+... ...+|++..| .+||+++++++ | +++++|++|+|+++++..++
T Consensus 34 ~~~~~i~l~~~~~~~~~~~~~~~al~~~~~-~~~~Y~~~~g-~~lr~~ia~~~----~--~~~~~i~~t~G~~~~l~~~~ 105 (371)
T PRK05166 34 GVPRIAKLGSNENPLGPSPAVRRAFADIAE-LLRLYPDPQG-RALREAIAART----G--VPADRIILGNGSEDLIAVIC 105 (371)
T ss_pred CCcceEEcCCCCCCCCCCHHHHHHHHHHHH-HhhcCCCCcH-HHHHHHHHHHh----C--cCHHHEEEcCCHHHHHHHHH
Confidence 345799999999999888899998887543 3567988788 59999999986 3 57889999999999999999
Q ss_pred HHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHH
Q 014172 173 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 252 (429)
Q Consensus 173 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~ 252 (429)
.+++++||.|+++.|+|+.+...++..|++++.++++. ++.+|++++++.++++++++++++||||||.+++.+++++
T Consensus 106 ~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~ 183 (371)
T PRK05166 106 RAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTP--DLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTADQLAR 183 (371)
T ss_pred HHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCC--CCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999864 3568999999999888999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEccCCcccccCCCCCCcccc-CCCCCCceEEEeccChhcccccceeeEEEc-CHHHHHHHHHHhhc
Q 014172 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS-LPGMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQ 330 (429)
Q Consensus 253 I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~-~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~-~~~~~~~l~~~~~~ 330 (429)
|+++|+ + +++||+||+|.++.+++. .++... +....+++|+++||||.||++|+|+||+++ ++++++.+.+...
T Consensus 184 l~~~~~-~-~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~~~- 259 (371)
T PRK05166 184 VLDATP-P-ETLIVVDEAYAEYAAGDD-YPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRVRT- 259 (371)
T ss_pred HHHhCC-C-CcEEEEECcHHHhcCCcC-cccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHHHHHHhcc-
Confidence 999986 4 688999999999886542 223322 222346899999999999999999999875 7888888876653
Q ss_pred ccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCC
Q 014172 331 FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKI 410 (429)
Q Consensus 331 ~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~ 410 (429)
..+++.++|.++.++|.. .+++++.++.++++|+.+.+.|++. |+.+. |.+|+|+|++++.
T Consensus 260 -~~~~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-p~~g~fl~~~~~~------------ 320 (371)
T PRK05166 260 -PFNVNGAAQAAALAALDD----EEHLAKGVALALAERERLKKELAEM-GYRIA-PSRANFLFFDARR------------ 320 (371)
T ss_pred -CCCCCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHHC-cCeeC-CCcCCEEEEeCCC------------
Confidence 345789999888888874 6789999999999999999999988 88764 6667889999752
Q ss_pred CChHHHHHHHHHhCCeec
Q 014172 411 ENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 411 ~~~~~~~~~Ll~~~gV~v 428 (429)
++.++++.|+++ ||.+
T Consensus 321 -~~~~l~~~l~~~-gi~v 336 (371)
T PRK05166 321 -PASAVAEALLRQ-GVIV 336 (371)
T ss_pred -CHHHHHHHHHHC-CeEE
Confidence 578999999876 8876
No 82
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.9e-43 Score=338.71 Aligned_cols=296 Identities=31% Similarity=0.489 Sum_probs=258.4
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 175 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l 175 (429)
++++|+.|++++++|+.+.+++.+.+. ..++| |.+...+|+++++++++. .++++|++++|+++.|..+++++
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~~~~-~~~rY-Pd~~~~~l~~a~a~~~~~-----~~~~~V~~gnGsde~i~~l~~~~ 95 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRAALD-KLNRY-PDPDYRELRAALAEYYGV-----VDPENVLVGNGSDELIELLVRAF 95 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHHHHHHH-hhccC-CCCcHHHHHHHHHHHhCC-----CCcceEEEcCChHHHHHHHHHHh
Confidence 589999999999999999999988876 46778 666889999999999742 47789999999999999999999
Q ss_pred cCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHH
Q 014172 176 CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIAR 255 (429)
Q Consensus 176 ~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~ 255 (429)
+.+||+|+++.|+|..|...++..|++++.++..+ |.+|++.+.+.+.+++++|++||||||||..++.++++++++
T Consensus 96 ~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~---~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~ 172 (356)
T COG0079 96 VEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE---FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELRALLE 172 (356)
T ss_pred hcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc---cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999864 889999999999989999999999999999999999999999
Q ss_pred HHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCC
Q 014172 256 IVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGA 335 (429)
Q Consensus 256 ~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~ 335 (429)
.+.+ +.+||+||+|.+|.- .+...+...+++++++.||||.||++|+|+||+++++++++.+.+++.+|+ .
T Consensus 173 ~~~~--~~~vVvDEAY~eF~~-----~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i~~l~~vr~p~~--v 243 (356)
T COG0079 173 ALPE--GGLVVIDEAYIEFSP-----ESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPELIAALNKVRPPFN--V 243 (356)
T ss_pred hCCC--CcEEEEeCchhhcCC-----chhhhhccCCCCEEEEEecHHhhhcchhceeeccCCHHHHHHHHHhcCCCC--C
Confidence 8876 478888999999753 222222224678999999999999999999999999999999999998876 7
Q ss_pred chHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHH
Q 014172 336 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSES 415 (429)
Q Consensus 336 ~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 415 (429)
+.+++.++.++|.+ .+++++.++.....|+++.+.|+++ |+.-+.|..+.|++++++.. . ...
T Consensus 244 ~~~a~~aa~aal~~----~~~~~~~~~~~~~~r~rl~~~l~~~-~~~~v~pS~aNFvlv~~~~~-----------~-~~~ 306 (356)
T COG0079 244 SSPALAAAIAALRD----ADYLEESVERIREERERLYAALKAL-GLFGVFPSQANFVLVRVPDA-----------E-AAA 306 (356)
T ss_pred CHHHHHHHHHHccc----HHHHHHHHHHHHHHHHHHHHHHHhC-CCCeecCCCCcEEEEECCCc-----------c-HHH
Confidence 89999999999996 6899999999999999999999998 45523455577799999742 2 567
Q ss_pred HHHHHHHhCCeec
Q 014172 416 LCRYLLDKAQVLL 428 (429)
Q Consensus 416 ~~~~Ll~~~gV~v 428 (429)
+.++|+++ ||.|
T Consensus 307 l~~~L~~~-giiv 318 (356)
T COG0079 307 LAEALLKK-GILV 318 (356)
T ss_pred HHHHHHHC-CEEE
Confidence 88888877 8875
No 83
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-42 Score=343.20 Aligned_cols=300 Identities=23% Similarity=0.297 Sum_probs=254.7
Q ss_pred cCCC-eEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHH
Q 014172 93 AGVS-VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 171 (429)
Q Consensus 93 ~g~~-~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~ 171 (429)
.|.+ .|+|+.|+|++++|+.+.+++.+.+.. ...|++. +..+||++||+++ + +++++|++|+|+++++..+
T Consensus 29 ~g~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~-~~~Y~~~-~~~~Lr~~ia~~~----~--~~~~~I~it~G~~~~l~~~ 100 (369)
T PRK08153 29 RGRPFRARIGANESGFGPSPSVIAAMREAAAE-IWKYGDP-ENHDLRHALAAHH----G--VAPENIMVGEGIDGLLGLI 100 (369)
T ss_pred cCCcceeEecCCCCCCCCCHHHHHHHHHHHHH-hhcCCCC-ccHHHHHHHHHHh----C--CCHHHEEEcCCHHHHHHHH
Confidence 5665 469999999999999999999887643 4578654 6899999999997 3 6789999999999999999
Q ss_pred HHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhc-ccCCcEEEEcCCCCCccCCCCHHHH
Q 014172 172 VLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL-TEKSRLLILCSPSNPTGSVYPKNLL 250 (429)
Q Consensus 172 l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l-~~~~~~i~l~~p~NPtG~~~~~~~l 250 (429)
+.+++++||.|++++|+|+.+...++..|++++.+|++.+ .+|++.+++.+ ..+++++++++||||||.+++.+++
T Consensus 101 ~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~---~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l 177 (369)
T PRK08153 101 VRLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDD---REDLDALLDAARRENAPLVYLANPDNPMGSWHPAADI 177 (369)
T ss_pred HHHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCC---CCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHH
Confidence 9999999999999999999999999999999999998532 47999998766 4678999999999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhc
Q 014172 251 DEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ 330 (429)
Q Consensus 251 ~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~ 330 (429)
++|+++|+ + +++||+||+|.++.+++. ..+ +....+++|+++||||.||++|+|+||+++++++++.+.+....
T Consensus 178 ~~l~~~~~-~-~~~lI~DE~y~~~~~~~~-~~~---~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~~~~ 251 (369)
T PRK08153 178 VAFIEALP-E-TTLLVLDEAYCETAPAGA-APP---IDTDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKVRNH 251 (369)
T ss_pred HHHHHhCC-C-CcEEEEeCchhhhcCccc-chh---hhhcCCCEEEEecchHhccCcchheeeeecCHHHHHHHHHhhcC
Confidence 99999886 5 789999999999877542 222 22235789999999999999999999999999999998877654
Q ss_pred ccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCC
Q 014172 331 FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKI 410 (429)
Q Consensus 331 ~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~ 410 (429)
.+.+.++|.++..+|++ .+++++.++.++++|+.+.+.|++. |+.+. |.+++|+|++++.. .
T Consensus 252 --~~~s~~~q~~~~~~l~~----~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~-p~~~~f~~~~~~~~----------~ 313 (369)
T PRK08153 252 --FGMNRIAQAAALAALKD----QAYLAEVVGKIAAARDRIAAIARAN-GLTPL-PSATNFVAIDCGRD----------G 313 (369)
T ss_pred --CCCCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCcCcEEEEECCCC----------c
Confidence 46899999999999974 6789999999999999999999987 77654 78889999998631 0
Q ss_pred CChHHHHHHHHHhCCeec
Q 014172 411 ENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 411 ~~~~~~~~~Ll~~~gV~v 428 (429)
....++.++|+++ ||.+
T Consensus 314 ~~a~~l~~~l~~~-Gi~v 330 (369)
T PRK08153 314 AFARAVLDGLIAR-DIFV 330 (369)
T ss_pred ccHHHHHHHHHHC-CeEE
Confidence 2477888888765 9876
No 84
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.8e-43 Score=343.51 Aligned_cols=294 Identities=21% Similarity=0.356 Sum_probs=249.1
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 174 (429)
.++|+|+.|+|++++|+.+.+++.+.+......|+ ..|..+||++||++++ +++++|++|+|+++++.+++++
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~y~-~~~~~~lr~aia~~~~------~~~~~I~it~G~~~al~~~~~~ 96 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRAALGDDLRLYP-DPNADALRQAIAAYYG------LDPEQVFVGNGSDEVLAHAFLA 96 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHhhhhhhcCC-CCcHHHHHHHHHHHhC------CCHHHEEEcCCHHHHHHHHHHH
Confidence 46899999999999899999999988765567784 5577999999999974 6889999999999999999999
Q ss_pred hcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHH
Q 014172 175 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 254 (429)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~ 254 (429)
++++||+|++++|+|+.|...++..|++++.++++ +++.+|++.+++ +++++++++||||||.+++.+++++|+
T Consensus 97 l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~----~~~~v~~~~P~NPtG~~~~~~~~~~l~ 170 (353)
T PRK05387 97 FFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLD--DDFSIDVEDYLR----PNGGIIFPNPNAPTGIALPLAEIERIL 170 (353)
T ss_pred hcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecC--CCCCCCHHHHHh----cCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999985 357799999874 467889999999999999988888888
Q ss_pred HHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcc-cC
Q 014172 255 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF-TS 333 (429)
Q Consensus 255 ~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~-~~ 333 (429)
+.+ + +++||+||+|.++ ++....++ ....+++++++||||.||++|+|+||+++++++++.+....... ..
T Consensus 171 ~~~--~-~~~livDe~y~~~--~~~~~~~~---~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~~~~~~~ 242 (353)
T PRK05387 171 AAN--P-DSVVVIDEAYVDF--GGESAIPL---IDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPELIEALNRVKNSFNSY 242 (353)
T ss_pred HhC--C-CcEEEEeCccccc--CCcchHHH---HhhCCCEEEEEehhHhhcchhhhceeeecCHHHHHHHHHhhccCCCC
Confidence 754 3 7999999999874 33222222 22357899999999999999999999999999999988776543 34
Q ss_pred CCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCCh
Q 014172 334 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 413 (429)
Q Consensus 334 ~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~ 413 (429)
+++.+.|.++..++.. .+++++.++.++++|+.+.+.|+++ |+++. |.+++|+|++++.. ++
T Consensus 243 ~~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~------------~~ 304 (353)
T PRK05387 243 PLDRLAQAGAIAAIED----EAYFEETRAKVIATRERLVEELEAL-GFEVL-PSKANFVFARHPSH------------DA 304 (353)
T ss_pred CcCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHHC-CCeEC-CCcCcEEEEECCCC------------CH
Confidence 6789999999998874 6778889999999999999999998 88764 66778899998742 68
Q ss_pred HHHHHHHHHhCCeec
Q 014172 414 ESLCRYLLDKAQVLL 428 (429)
Q Consensus 414 ~~~~~~Ll~~~gV~v 428 (429)
.+++++|.++ ||.|
T Consensus 305 ~~~~~~l~~~-gi~v 318 (353)
T PRK05387 305 AELAAKLRER-GIIV 318 (353)
T ss_pred HHHHHHHHHC-CEEE
Confidence 8999998655 9876
No 85
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=9e-43 Score=346.61 Aligned_cols=316 Identities=19% Similarity=0.233 Sum_probs=244.3
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHH----cCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCC---CCcEEEecChHHHHH
Q 014172 97 VIRLAAGEPDFDTPVLIAEAGINAIR----EGFTRYTPNAGTLELRSAICHKLKEENGLSYT---PDQILVSNGAKQSIL 169 (429)
Q Consensus 97 ~i~L~~g~~~~~~p~~v~~a~~~~~~----~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~---~~~i~~t~G~~~al~ 169 (429)
.++.++|.-.-+..+.+.+++.+.+. ....+|++..|.++||+++++++.+..+ .+. .++|++|+|+++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~~~I~it~G~~~al~ 83 (388)
T PRK08637 5 KYNATIGMATEKGGPMYLSSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTNALTHGLS 83 (388)
T ss_pred ceecceeeEecCCCcchHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCc-cccccccceeeEccchHHHHH
Confidence 45666665221112244444444333 2467899999999999999999877553 233 268999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCCCChHHHHH-HcCCEEEEecCCCCCCCCCCHHHHHhhcc----cCCcEEEEcCCCCCccCC
Q 014172 170 QAVLAVCSPGDEVIIPAPFWVSYPEMAR-IADATPVILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSNPTGSV 244 (429)
Q Consensus 170 ~~l~~l~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~e~l~~~l~----~~~~~i~l~~p~NPtG~~ 244 (429)
+++.+++++||.|++++|+|+.|...+. ..|++++.+|+..+ ++++|++.+++.++ +..+++++++||||||.+
T Consensus 84 ~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~-~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~ 162 (388)
T PRK08637 84 LVADLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDE-DGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYT 162 (388)
T ss_pred HHHHHhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccCC-CCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCC
Confidence 9999999999999999999999998764 68999999998422 34589999998876 344566789999999999
Q ss_pred CCHHHHHHHHHHHHh-----CCCeEEEEccCCcccccCCCCCCcc-ccCCCCCCce--EEEeccChhcccccceeeEEEc
Q 014172 245 YPKNLLDEIARIVAK-----HPRLLVLSDEIYEHIIYAPATHTSF-ASLPGMWERT--LTVNGFSKAFAMTGWRLGYIAG 316 (429)
Q Consensus 245 ~~~~~l~~I~~~a~~-----~~~i~vi~Deay~~~~~~~~~~~~~-~~~~~~~~~~--i~~~S~SK~~~~~G~R~G~v~~ 316 (429)
++.+++++|+++|++ | +++||+||+|.++.|++....++ ..+....+++ ++++||||.++++|+|+||+++
T Consensus 163 ~s~~~~~~l~~~~~~~~~~~~-~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~ 241 (388)
T PRK08637 163 PTEKEATAIVEAIKELADAGT-KVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITF 241 (388)
T ss_pred CCHHHHHHHHHHHHHHHhcCC-cEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEE
Confidence 999999999999875 8 99999999999999977544443 2333334674 4567999999999999999985
Q ss_pred C------HHHHHHHHHHh----hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC---CCcee
Q 014172 317 P------KHFVAACNKIQ----SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL---EGVKM 383 (429)
Q Consensus 317 ~------~~~~~~l~~~~----~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l---~g~~~ 383 (429)
+ +++++.+.+.. .....+++.+.|.++..+|.++.. ..++++.+..++++++.+.+.|+.. +++.+
T Consensus 242 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~-~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~ 320 (388)
T PRK08637 242 GTKAGSSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPEF-DKEKQEKFQILKERYEKTKEVLYDGKYDDAWQA 320 (388)
T ss_pred ccccCCcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccc
Confidence 4 67777776421 223346899999999999976322 3456667778999999999988764 26788
Q ss_pred ecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 384 SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 384 ~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+|++|||+|++++.. ++.+|+++|++++||.+
T Consensus 321 ~~~~~g~~~~~~l~~~------------~~~~l~~~l~~~~gv~~ 353 (388)
T PRK08637 321 YPFNSGYFMCLKLKGV------------DAEELRVHLLEKYGIGT 353 (388)
T ss_pred ccccceEEEEecCChH------------HHHHHHHHHhhhcceEE
Confidence 8899999999999742 67899999988889875
No 86
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.9e-42 Score=342.07 Aligned_cols=324 Identities=25% Similarity=0.426 Sum_probs=265.5
Q ss_pred cccccccCCchh-HHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHh
Q 014172 69 SPRVNAVKPSKT-VAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 147 (429)
Q Consensus 69 s~~~~~~~~~~~-~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~ 147 (429)
++++.++.++.. ..+...++++ .+.++|+|+.|+|++++|+.+.+++.+.+.. ...|++. +..+||+++|++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~~~y~~~-~~~~lr~~ia~~~~- 81 (367)
T PRK02731 7 NPGILDIAPYVPGKPIEELVREY--GIADIIKLASNENPLGPSPKAIEAIRAAADE-LHRYPDG-SGFELKAALAEKFG- 81 (367)
T ss_pred hhhhcccCCcCCCCCHHHHHHhc--CCCceEEecCCCCCCCCCHHHHHHHHHHHHh-hcCCCCC-cHHHHHHHHHHHhC-
Confidence 344445554422 2233334443 5667999999999998888999999888754 5678654 45799999999973
Q ss_pred hcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc
Q 014172 148 ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 227 (429)
Q Consensus 148 ~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~ 227 (429)
+++++|++|+|+++++..++.+++++||+|++++|+|..|...++..|++++.++. +++.+|++.+++.+++
T Consensus 82 -----~~~~~i~~t~G~~~~l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~~ 153 (367)
T PRK02731 82 -----VDPERIILGNGSDEILELLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA---KDYGHDLDAMLAAVTP 153 (367)
T ss_pred -----cCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc---cCCCCCHHHHHHHhCC
Confidence 57789999999999999999999999999999999999999889999999999987 3467899999999988
Q ss_pred CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccc
Q 014172 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 307 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 307 (429)
++++|++++||||||.+++.+++++|++.|+ + ++++|+||+|.++.+++....++..+ ...+++++++||||.||++
T Consensus 154 ~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~-~~~li~De~y~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~g~~ 230 (367)
T PRK02731 154 RTRLVFIANPNNPTGTYLPAEEVERFLAGVP-P-DVLVVLDEAYAEYVRRKDYEDGLELV-AKFPNVVVTRTFSKAYGLA 230 (367)
T ss_pred CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCC-C-CcEEEEECcHHHhccCcCcccHHHHH-hhcCCEEEEeeehHhhcCc
Confidence 9999999999999999999999999988874 6 89999999999988765433333222 2357899999999999999
Q ss_pred cceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCC
Q 014172 308 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 387 (429)
Q Consensus 308 G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~ 387 (429)
|+|+||+++++++++.+.+....+ +.+.++|.++..++++ .+++++.++.++++++.+.+.|+++ |+.+. |.
T Consensus 231 G~RiG~l~~~~~~~~~l~~~~~~~--~~~~~~~~~a~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~ 302 (367)
T PRK02731 231 GLRVGYGIAPPEIIDALNRVRQPF--NVNSLALAAAVAALDD----DAFVEKSRALNAEGMAWLTEFLAEL-GLEYI-PS 302 (367)
T ss_pred ccceeeeeCCHHHHHHHHHccCCC--CCCHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CC
Confidence 999999999999999988765543 4678999999999974 6788899999999999999999998 88776 45
Q ss_pred ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 388 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+|+|+|++++.. .++.+++++|.++ ||.|
T Consensus 303 ~g~~~~i~~~~~-----------~~~~~~~~~L~~~-gI~v 331 (367)
T PRK02731 303 VGNFILVDFDDG-----------KDAAEAYQALLKR-GVIV 331 (367)
T ss_pred CceEEEEECCCC-----------CCHHHHHHHHHHC-CEEE
Confidence 678899999643 3688999998765 9876
No 87
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.6e-42 Score=335.31 Aligned_cols=290 Identities=22% Similarity=0.346 Sum_probs=236.7
Q ss_pred cCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHH
Q 014172 93 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGF-TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 171 (429)
Q Consensus 93 ~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~ 171 (429)
.+.++|+|+.|+|++++|+.+.+++.+++..+. ..| +..|..+||+++++++++.+ +++++|++|+|++++|.++
T Consensus 17 ~~~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y-~~~~~~~Lr~aia~~~~~~~---~~~~~i~it~Ga~~~i~~~ 92 (335)
T PRK14808 17 EKRDRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIY-YDSPDEELIEKILSYLDTDF---LSKNNVSVGNGADEIIYVM 92 (335)
T ss_pred CCCceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcC-CCCChHHHHHHHHHHhCCCC---CCcceEEEcCCHHHHHHHH
Confidence 345799999999999999999999988775443 336 45589999999999997542 6789999999999999999
Q ss_pred HHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHH
Q 014172 172 VLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLD 251 (429)
Q Consensus 172 l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~ 251 (429)
++++ |.|++++|+|+.|...++..|++++.+|++.+ +.++.+. + .+++++++++||||||.+++.++++
T Consensus 93 ~~~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~----~-~~~~~i~i~nP~NPTG~~~s~~~l~ 161 (335)
T PRK14808 93 MLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKD--LRIPEVN----V-GEGDVVFIPNPNNPTGHVFEREEIE 161 (335)
T ss_pred HHHh----CcEEECCCCHHHHHHHHHHcCCeEEEecCCCc--CCCChhH----c-cCCCEEEEeCCCCCCCCCcCHHHHH
Confidence 9887 67999999999999999999999999998643 4444332 2 3568999999999999999988877
Q ss_pred HHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcc
Q 014172 252 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 331 (429)
Q Consensus 252 ~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~ 331 (429)
+|+ ++ +++||+||+|.+|. +....+ +....+++++++||||.||++|+|+||+++++++++.+.+.+..
T Consensus 162 ~l~----~~-~~~ii~DE~Y~~f~--~~~~~~---~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~~~~- 230 (335)
T PRK14808 162 RIL----KT-GAFVALDEAYYEFH--GESYVD---LLKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRVRLP- 230 (335)
T ss_pred HHH----hc-CCEEEEECchhhhc--CCchHH---HHHhCCCEEEEEechhhccCcccceEEEEeCHHHHHHHHHhcCC-
Confidence 775 47 89999999999864 221112 11234789999999999999999999999999999999876633
Q ss_pred cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCC
Q 014172 332 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 411 (429)
Q Consensus 332 ~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~ 411 (429)
.+.+.++|.++..+++. .++..+..+.++++|+.+.+.|+++ |+++.+|+|+ |+|+.++..
T Consensus 231 -~~~~~~~q~a~~~~l~~----~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~g~-f~~~~l~~~------------ 291 (335)
T PRK14808 231 -FNVSYVSQMFAKVALDH----REIFEERTKFIVEERERMKSALREM-GYRITDSRGN-FVFIFMEKE------------ 291 (335)
T ss_pred -CCCCHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCe-EEEEeCCCc------------
Confidence 45788999999888874 4677788888889999999999998 8888877665 579999742
Q ss_pred ChHHHHHHHHHhCCeec
Q 014172 412 NSESLCRYLLDKAQVLL 428 (429)
Q Consensus 412 ~~~~~~~~Ll~~~gV~v 428 (429)
+..++.++|.++ ||.|
T Consensus 292 ~~~~~~~~l~~~-Gi~V 307 (335)
T PRK14808 292 EKERLLEHLRAK-NIAV 307 (335)
T ss_pred cHHHHHHHHHHC-CeEE
Confidence 567888877665 9876
No 88
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-41 Score=335.29 Aligned_cols=328 Identities=27% Similarity=0.422 Sum_probs=271.3
Q ss_pred cccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHhhcCC
Q 014172 73 NAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGL 151 (429)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~ 151 (429)
.++++..+..+........ ++.++|+|+.|++.+++++.+.+++.+.+..+ ...|.+..|..+||++++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~----- 80 (380)
T PRK06225 7 AKVPPSGFKTSNEFFDYVF-KDKEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLG----- 80 (380)
T ss_pred cccCcchhhhHHHHHHHHh-hcCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhcC-----
Confidence 3455555555555454443 34579999999999999999999999988753 4668888899999999999973
Q ss_pred CCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCC-CCCCCCCHHHHHhhcccCCc
Q 014172 152 SYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRI-SENFLLDPKVLESKLTEKSR 230 (429)
Q Consensus 152 ~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~~d~e~l~~~l~~~~~ 230 (429)
+++++|++|+|+++++..++++++.+||+|++++|+|..+...++..|++++.++++. +++|.+|++.+++.++++++
T Consensus 81 -~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~ 159 (380)
T PRK06225 81 -LDDDEALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTR 159 (380)
T ss_pred -CCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCce
Confidence 5778999999999999999999999999999999999999999999999999999743 34678999999999998999
Q ss_pred EEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccce
Q 014172 231 LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWR 310 (429)
Q Consensus 231 ~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R 310 (429)
++++++|+||||.+++.+++++|+++|++| |+++|+||+|.++.++. .+...+. .++++++.||||.+|++|+|
T Consensus 160 ~v~l~~p~NptG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~---~~~~~~~--~~~~i~~~s~SK~~g~~G~R 233 (380)
T PRK06225 160 LIYLIDPLNPLGSSYTEEEIKEFAEIARDN-DAFLLHDCTYRDFAREH---TLAAEYA--PEHTVTSYSFSKIFGMAGLR 233 (380)
T ss_pred EEEEeCCCCCCCcCCCHHHHHHHHHHHHHC-CcEEEEehhHHHHhccC---CchhhcC--CCCEEEEeechhhcCCccce
Confidence 999999999999999999999999999999 99999999998765321 2222222 47889999999999999999
Q ss_pred eeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCcee-ecCCce
Q 014172 311 LGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM-SEPQGA 389 (429)
Q Consensus 311 ~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~-~~p~~~ 389 (429)
+||+++++++++.+..... ...+.+.++|.++..++.. ..+++++.++.++++++.+.+.|++++|+.+ ..|.+|
T Consensus 234 iG~i~~~~~l~~~~~~~~~-~~~~~~~~~~~~a~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g 309 (380)
T PRK06225 234 IGAVVATPDLIEVVKSIVI-NDLGTNVIAQEAAIAGLKV---KDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHG 309 (380)
T ss_pred eEEEecCHHHHHHHHHHHh-cccCCCHHHHHHHHHHHhc---chHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCC
Confidence 9999999999998877643 3456788999998888875 3677888888899999999999998767543 246667
Q ss_pred EEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 390 FYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 390 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+|+|++++.. + .+..+++++|.+ +||.+
T Consensus 310 ~~~~~~~~~~-~---------~~~~~l~~~l~~-~gi~v 337 (380)
T PRK06225 310 NMMVIDISEA-G---------IDPEDLVEYLLE-RKIFV 337 (380)
T ss_pred eEEEEEcccc-c---------CCHHHHHHHHHH-CCEEE
Confidence 7889998642 0 267899999885 48875
No 89
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-41 Score=334.58 Aligned_cols=292 Identities=25% Similarity=0.457 Sum_probs=243.1
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 174 (429)
..++|+.|+|++++|+.+.+++.+.+.. ...+|++ .+..+||+++|+++. +++++|++|+|+++++..++.+
T Consensus 23 ~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~~-~~~~~lr~~ia~~~~------~~~~~i~it~G~~~~l~~~~~~ 95 (351)
T PRK14807 23 YKYKMDANETPFELPEEVIKNIQEIVKSSQVNIYPD-PTAEKLREELARYCS------VVPTNIFVGNGSDEIIHLIMLA 95 (351)
T ss_pred ceeEccCCCCCCCCCHHHHHHHHHHhhcCcccCCCC-ccHHHHHHHHHHHhC------CCcccEEEecCHHHHHHHHHHH
Confidence 4799999999999999999999887764 3466854 457899999999973 5789999999999999999999
Q ss_pred hcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-CCcEEEEcCCCCCccCCCCHHHHHHH
Q 014172 175 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEI 253 (429)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~p~NPtG~~~~~~~l~~I 253 (429)
++++||+|++++|+|..|...++..|++++.++++ +++.+|++.+++++++ ++|+|++++||||||.+++.+++
T Consensus 96 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l--- 170 (351)
T PRK14807 96 FINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLK--EDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDI--- 170 (351)
T ss_pred hcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHH---
Confidence 99999999999999999999999999999999985 3467999999999975 89999999999999999995555
Q ss_pred HHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccC
Q 014172 254 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS 333 (429)
Q Consensus 254 ~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~ 333 (429)
.++|+++ +.++|+||+|.++ + +....+. + ...+++|+++||||.||++|+|+||+++++++++.+...... .
T Consensus 171 ~~l~~~~-~~~~ivDe~y~~~-~-~~~~~~~--~-~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~~~~~~~--~ 242 (351)
T PRK14807 171 IKIIEKS-RGIVVVDEAYFEF-Y-GNTIVDV--I-NEFENLIVLRTLSKAFGLAGLRVGYAVANENILKYLNLVKSP--Y 242 (351)
T ss_pred HHHHHhC-CCEEEEeCcchhh-c-ccchHHH--h-hhCCCEEEEecchHhcccchhceeeeecCHHHHHHHHHccCC--C
Confidence 4555566 6788899999886 3 2222222 1 235789999999999999999999999999999999876553 4
Q ss_pred CCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCCh
Q 014172 334 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 413 (429)
Q Consensus 334 ~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~ 413 (429)
+.+.++|.++..+++. .++++..+.++++|+.+.+.|++++|+.+. |.+|+|+|++++ ++
T Consensus 243 ~~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~-~~~~~~~~i~~~--------------~~ 302 (351)
T PRK14807 243 NINSLSQVIALKVLRT-----GVLKERVNYILNERERLIKELSKIPGIKVY-PSKTNFILVKFK--------------DA 302 (351)
T ss_pred CcCHHHHHHHHHHHhH-----HHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-cCCccEEEEEcC--------------CH
Confidence 4788999999999874 356777788899999999999888888875 555678999986 46
Q ss_pred HHHHHHHHHhCCeec
Q 014172 414 ESLCRYLLDKAQVLL 428 (429)
Q Consensus 414 ~~~~~~Ll~~~gV~v 428 (429)
.++++.|+++ ||.|
T Consensus 303 ~~~~~~l~~~-gV~v 316 (351)
T PRK14807 303 DYVYQGLLER-GILV 316 (351)
T ss_pred HHHHHHHHHC-CEEE
Confidence 7888887765 8876
No 90
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.7e-42 Score=337.91 Aligned_cols=294 Identities=24% Similarity=0.404 Sum_probs=247.6
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCC-CcEEEecChHHHHHHH
Q 014172 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGLSYTP-DQILVSNGAKQSILQA 171 (429)
Q Consensus 94 g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-~~i~~t~G~~~al~~~ 171 (429)
+.++|+|+.|+|++++|+.+++++.+.+.. ...+|++ .|..+||++++++++ +.+ ++|++|+|+++++..+
T Consensus 25 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~~------~~~~~~I~~t~G~~~~i~~~ 97 (356)
T PRK04870 25 ATGMVKLDAMENPYRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAMG------VPAGADVLLGNGSDELIQLL 97 (356)
T ss_pred CCCceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHhC------cCCCCcEEEcCCHHHHHHHH
Confidence 347999999999999999999999998864 3567865 788999999999974 233 5899999999999999
Q ss_pred HHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc-cCCcEEEEcCCCCCccCCCCHHHH
Q 014172 172 VLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLL 250 (429)
Q Consensus 172 l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~-~~~~~i~l~~p~NPtG~~~~~~~l 250 (429)
+++++++||+|++++|+|..|...++..|++++.++++ +++.+|++.+++++. .++++|++++||||||.+++.+++
T Consensus 98 ~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~ 175 (356)
T PRK04870 98 ALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLT--ADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADV 175 (356)
T ss_pred HHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHH
Confidence 99999999999999999999999999999999999986 347799999999986 489999999999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhc
Q 014172 251 DEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ 330 (429)
Q Consensus 251 ~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~ 330 (429)
++|+++| + +++|+||+|.+|.+.. .... +. ..+++++++|||| ++++|+|+||+++++++++.+......
T Consensus 176 ~~i~~~~--~--~~ii~De~y~~~~~~~-~~~~---~~-~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~i~~~~~~~~~ 245 (356)
T PRK04870 176 ERIIEAA--P--GLVVVDEAYQPFAGDS-WLPR---LA-RFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIAELDKVRPP 245 (356)
T ss_pred HHHHHHC--C--CEEEEECCchhhcCcc-hHHH---Hh-hCCCEEEEecchh-hhhHHHhhhhhhCCHHHHHHHHHccCC
Confidence 9999988 3 5788899999875432 1111 22 2468999999999 899999999999999999998876543
Q ss_pred ccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCC
Q 014172 331 FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKI 410 (429)
Q Consensus 331 ~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~ 410 (429)
.+.+.++|.++..+++. .+++++.++.++++|+.+.+.|++++|+.+. |.+++|+|++++
T Consensus 246 --~~~~~~~q~~a~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~------------- 305 (356)
T PRK04870 246 --YNVNVLTQATALFALEH----VDVLDAQAAQLRAERTRLAAALAALPGVTVF-PSAANFILVRVP------------- 305 (356)
T ss_pred --CcCCHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEECC-------------
Confidence 35788999988888874 4668888999999999999999998888764 666778999986
Q ss_pred CChHHHHHHHHHhCCeec
Q 014172 411 ENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 411 ~~~~~~~~~Ll~~~gV~v 428 (429)
+..++++.| +++||.|
T Consensus 306 -~~~~~~~~l-~~~gI~v 321 (356)
T PRK04870 306 -DAAAVFDGL-KTRGVLV 321 (356)
T ss_pred -CHHHHHHHH-HHCCEEE
Confidence 356788766 4559986
No 91
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.9e-42 Score=338.40 Aligned_cols=291 Identities=23% Similarity=0.384 Sum_probs=242.5
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 175 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l 175 (429)
..|+|+.|++++++|+.+. .....+| |.....+|++++++++ | +++++|++|+|+++++.++++++
T Consensus 29 ~~~~l~~Nenp~~~~~~~~-------~~~~~~Y-p~~~~~~l~~~~a~~~----g--~~~~~I~~~~Gs~e~i~~~~~~~ 94 (351)
T PRK01688 29 GDVWLNANEYPTAVEFQLT-------QQTLNRY-PECQPKAVIENYAAYA----G--VKPEQVLVSRGADEGIELLIRAF 94 (351)
T ss_pred CceEecCCCCCCCCChhhc-------ccccccC-CCCChHHHHHHHHHHh----C--CCHHHEEEcCCHHHHHHHHHHHh
Confidence 4699999999999886531 1234567 5555678888888876 4 68899999999999999999999
Q ss_pred cCCC-CEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHH
Q 014172 176 CSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 254 (429)
Q Consensus 176 ~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~ 254 (429)
+++| |.|+++.|+|..|...++..|++++.+|++. +|.+|++.+++++ +++++|++||||||||.+++.+++++|+
T Consensus 95 ~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~--~~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~~l~~l~ 171 (351)
T PRK01688 95 CEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLD--NWQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQDLRTLL 171 (351)
T ss_pred cCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCC--CCCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 9997 9999999999999999999999999999853 4789999999988 5899999999999999999999999999
Q ss_pred HHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCC
Q 014172 255 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG 334 (429)
Q Consensus 255 ~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~ 334 (429)
+.|++ +.+||+||+|.+|... .+...+....+++++++||||.||++|+|+||+++++++++.+.+....+ +
T Consensus 172 ~~~~~--~~~vivDEay~~f~~~----~s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~~i~~l~~~~~~~--~ 243 (351)
T PRK01688 172 ELTRG--KAIVVADEAYIEFCPQ----ASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEVINLLLKVIAPY--P 243 (351)
T ss_pred HhCCC--CcEEEEECchhhcCCC----CChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHHHHHHHHhccCCC--C
Confidence 99875 4679999999987532 13333333367999999999999999999999999999999998876554 4
Q ss_pred CchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChH
Q 014172 335 ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSE 414 (429)
Q Consensus 335 ~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 414 (429)
.+.+.|.++.++|.+. ..+++++.++.++++|+++.+.|++++|++.+.|.+++|+|++++ ++.
T Consensus 244 v~~~~~~~a~~~L~~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~--------------~~~ 307 (351)
T PRK01688 244 LSTPVADIAAQALSPQ--GIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFT--------------ASS 307 (351)
T ss_pred CCHHHHHHHHHHHhcc--hHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC--------------CHH
Confidence 6778888888888752 246788888999999999999999987776455777888999885 467
Q ss_pred HHHHHHHHhCCeec
Q 014172 415 SLCRYLLDKAQVLL 428 (429)
Q Consensus 415 ~~~~~Ll~~~gV~v 428 (429)
+++++|+++ ||.|
T Consensus 308 ~l~~~L~~~-gi~v 320 (351)
T PRK01688 308 AVFKSLWDQ-GIIL 320 (351)
T ss_pred HHHHHHHHC-CeEE
Confidence 899998865 8876
No 92
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-41 Score=333.62 Aligned_cols=293 Identities=26% Similarity=0.426 Sum_probs=240.9
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 175 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l 175 (429)
..+.|+.+++++++++... ....+|+ ..+..+||++|+++++ +++++|++|+|+++++.+++.++
T Consensus 32 ~~~~~~~ne~~~~~~~~~~--------~~~~~Y~-~~~~~~lr~~ia~~~~------~~~~~I~~t~G~~~~l~~~~~~~ 96 (364)
T PRK04781 32 GDVWLNANESAWANPADPD--------ASTRRYP-DPQPPGLRSALAALYG------CAPEQLLIGRGSDEAIDLLVRAL 96 (364)
T ss_pred CCEEeeCCCCCCCCChhhc--------chhccCC-CCCHHHHHHHHHHHhC------cChHHEEEeCCHHHHHHHHHHHh
Confidence 3689999999888765311 1235684 4457999999999973 57899999999999999999999
Q ss_pred cCCC-CEEEEcCCCCCChHHHHHHcCCEEEEecCCC-CCCCCCCHHHHHhh-cccCCcEEEEcCCCCCccCCCCHHHHHH
Q 014172 176 CSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRI-SENFLLDPKVLESK-LTEKSRLLILCSPSNPTGSVYPKNLLDE 252 (429)
Q Consensus 176 ~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~~d~e~l~~~-l~~~~~~i~l~~p~NPtG~~~~~~~l~~ 252 (429)
+.+| |.|++++|+|..|...++..|++++.+|++. ++++.+|++++.+. .++++++|++++||||||.+++.+++++
T Consensus 97 ~~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~ 176 (364)
T PRK04781 97 CVPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIER 176 (364)
T ss_pred cCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHH
Confidence 9999 7999999999999999999999999999853 35677899998654 4678999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhccc
Q 014172 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFT 332 (429)
Q Consensus 253 I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~ 332 (429)
|++.|+ + +++||+||+|.+|.+.. +...+....+++|+++||||.||++|+|+||+++++++++.+.+....+
T Consensus 177 l~~~~~-~-~~~iI~Deay~~f~~~~----~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~~~~- 249 (364)
T PRK04781 177 ALQALQ-G-KALVVVDEAYGEFSDVP----SAVGLLARYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQAPY- 249 (364)
T ss_pred HHHhCC-C-CcEEEEeCcchhhcCCc----chHHHHhhCCCEEEEecChhhcccccceeeeeeCCHHHHHHHHhccCCC-
Confidence 999885 5 68999999999987532 2222223368899999999999999999999999999999998876654
Q ss_pred CCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCC
Q 014172 333 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN 412 (429)
Q Consensus 333 ~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~ 412 (429)
+.+.+.|.++..+|.++ ..+++.+.++.++++|+.+.+.|++++|+....|.+|+|+|++++ +
T Consensus 250 -~~~~~~~~~a~~~l~~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~--------------~ 312 (364)
T PRK04781 250 -PVPTPCAALAEQALSAP--ALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD--------------D 312 (364)
T ss_pred -CCCHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC--------------C
Confidence 57889999999999863 135666777789999999999999987875456788899999986 3
Q ss_pred hHHHHHHHHHhCCeec
Q 014172 413 SESLCRYLLDKAQVLL 428 (429)
Q Consensus 413 ~~~~~~~Ll~~~gV~v 428 (429)
..++.+.|.+ +||.|
T Consensus 313 ~~~~~~~l~~-~gI~v 327 (364)
T PRK04781 313 AEAAFQALLA-AGVVV 327 (364)
T ss_pred HHHHHHHHHH-CCeEE
Confidence 5678877764 59976
No 93
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=3e-41 Score=331.69 Aligned_cols=298 Identities=27% Similarity=0.446 Sum_probs=247.7
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 175 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l 175 (429)
++|+|+.|++++++|+.+.+++.+.+.. ...| +..|..++|+++|++++ +++++|++|+|+++++..++..+
T Consensus 23 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~~~y-~~~g~~~lr~~ia~~~~------~~~~~I~~~~G~~~~l~~~~~~~ 94 (352)
T PRK03321 23 GAIKLSSNETPFGPLPSVRAAIARAAAG-VNRY-PDMGAVELRAALAEHLG------VPPEHVAVGCGSVALCQQLVQAT 94 (352)
T ss_pred cceeccCCCCCCCCCHHHHHHHHHHHHh-cCcC-CCCcHHHHHHHHHHHhC------cCHHHEEECCCHHHHHHHHHHHh
Confidence 5899999999998888999999887753 4567 56899999999999984 57889999999999999999999
Q ss_pred cCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHH
Q 014172 176 CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIAR 255 (429)
Q Consensus 176 ~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~ 255 (429)
+++||+|+++.|+|..|...++..|++++.++++++ +.+|++.+++.++++++++++++||||||.+++.+++.++++
T Consensus 95 ~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~ 172 (352)
T PRK03321 95 AGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPD--HTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAELARFLD 172 (352)
T ss_pred cCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCC--CCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHHHHHHHH
Confidence 999999999999999999999999999999998643 568999999999889999999999999999999887777777
Q ss_pred HHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCC
Q 014172 256 IVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGA 335 (429)
Q Consensus 256 ~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~ 335 (429)
.| ++ +++||+||+|.++.+++....++..+. ..+++++++||||.||++|+|+||+++++++++.+.+.. ...+.
T Consensus 173 ~~-~~-~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~--~~~~~ 247 (352)
T PRK03321 173 AV-PA-DVLVVLDEAYVEYVRDDDVPDGLELVR-DHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIAALRKVA--VPFSV 247 (352)
T ss_pred hC-CC-CeEEEEechHHHhccCcCCCcHHHHHh-hCCCEEEEecchHHhhhHHHhhhhhcCCHHHHHHHHHhc--CCCCC
Confidence 65 47 899999999999988654333333333 247899999999999999999999999999999998764 34568
Q ss_pred chHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHH
Q 014172 336 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSES 415 (429)
Q Consensus 336 ~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 415 (429)
+.++|.++.++|.. .+.+ .+..+.+.++|+.+.+.|++. |+.+. +.+|+|+|++++. ++.+
T Consensus 248 s~~~q~~a~~~l~~---~~~~-~~~~~~~~~~r~~~~~~L~~~-~~~~~-~~~g~~i~i~l~~-------------~~~~ 308 (352)
T PRK03321 248 NSLAQAAAIASLAA---EDEL-LERVDAVVAERDRVRAALRAA-GWTVP-PSQANFVWLPLGE-------------RTAD 308 (352)
T ss_pred CHHHHHHHHHHhcC---HHHH-HHHHHHHHHHHHHHHHHHHHC-CCccC-CCCCCEEEEeCCC-------------CHHH
Confidence 99999999888874 2444 444555566778899999887 77664 4467889999852 5778
Q ss_pred HHHHHHHhCCeec
Q 014172 416 LCRYLLDKAQVLL 428 (429)
Q Consensus 416 ~~~~Ll~~~gV~v 428 (429)
++++|. ++||.|
T Consensus 309 ~~~~l~-~~gI~v 320 (352)
T PRK03321 309 FAAAAA-EAGVVV 320 (352)
T ss_pred HHHHHH-HCCEEE
Confidence 999885 459986
No 94
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=7.5e-41 Score=325.95 Aligned_cols=280 Identities=19% Similarity=0.300 Sum_probs=225.7
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 175 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l 175 (429)
.+|+|+.|++++... ....+| |.....+||++++++++ +++++|++|+|+++++..++. +
T Consensus 17 ~~i~l~~Nenp~~~~------------~~~~~Y-p~~~~~~lr~~ia~~~~------~~~~~I~it~Gs~~~l~~~~~-~ 76 (332)
T PRK06425 17 RIIDFSANINDFMDI------------GDISIY-PEISYTDIEDQIKIYTQ------GLKIKVLIGPGLTHFIYRLLS-Y 76 (332)
T ss_pred CEEEeccccCCCcCh------------hhcccC-cCcCHHHHHHHHHHHhC------CCcceEEECCCHHHHHHHHHH-H
Confidence 589999999988521 123567 66668999999999975 578899999999999999887 5
Q ss_pred cCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHH
Q 014172 176 CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIAR 255 (429)
Q Consensus 176 ~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~ 255 (429)
+++|+ |++++|+|+.|...++..|++++.+|++. +.+|.+.+++ .++++|++|+||||||.+++.+++++|++
T Consensus 77 ~~~~~-vv~~~P~y~~y~~~~~~~G~~v~~vp~~~---~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~~~l~~ 149 (332)
T PRK06425 77 INVGN-IIIVEPNFNEYKGYAFTHGIRISALPFNL---INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSLLTISE 149 (332)
T ss_pred hCCCc-EEEeCCChHHHHHHHHHcCCeEEEEeCCc---ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHHHHHHH
Confidence 67764 66779999999999999999999999864 3357666653 37899999999999999999999999999
Q ss_pred HHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCC
Q 014172 256 IVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGA 335 (429)
Q Consensus 256 ~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~ 335 (429)
+|++| +++||+||+|.+|.+++. .+...+....+++|+++||||.||++|+|+||+++++++++.+.+....+. .
T Consensus 150 ~a~~~-~~~iI~DE~Y~~~~~~~~--~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~~~~~~--~ 224 (332)
T PRK06425 150 ICRKK-GALLFIDEAFIDFVPNRA--EEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYNMKISRKITEPWS--V 224 (332)
T ss_pred HHHHc-CCEEEEecchhccccccc--hhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCHHHHHHHHHcCCCCc--c
Confidence 99999 999999999999887542 234444444579999999999999999999999999999999887654433 3
Q ss_pred chHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHH
Q 014172 336 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSES 415 (429)
Q Consensus 336 ~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 415 (429)
+.+++ .++..+. .+.++++.++.|+++|+.+.+.|+++ |+++..+.+|+|+|++++ ++.+
T Consensus 225 ~~~~~----~~l~~~~-~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~g~f~~~~~~--------------~~~~ 284 (332)
T PRK06425 225 CDPAI----DFIRSID-LDYVAKHSLDIMENERSYLINNLEAM-GFRAAGDPSANFITFMIP--------------DAHD 284 (332)
T ss_pred CHHHH----HHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCceEEEEEcC--------------CHHH
Confidence 33332 2232211 24567788999999999999999998 888765556778999886 4679
Q ss_pred HHHHHHHhCCeec
Q 014172 416 LCRYLLDKAQVLL 428 (429)
Q Consensus 416 ~~~~Ll~~~gV~v 428 (429)
++++|+++ ||.|
T Consensus 285 ~~~~l~~~-gi~v 296 (332)
T PRK06425 285 FYSYLLKN-GILV 296 (332)
T ss_pred HHHHHHHC-CeEE
Confidence 99999875 8876
No 95
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-40 Score=312.81 Aligned_cols=295 Identities=22% Similarity=0.299 Sum_probs=247.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHH-hhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEE
Q 014172 125 FTRYTPNAGTLELRSAICHKLK-EENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATP 203 (429)
Q Consensus 125 ~~~Y~~~~G~~~lr~~ia~~l~-~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~ 203 (429)
..+|++..|.++|...|.++.. ..+...+..++|++|+|.+.+++.+++.+|++||.|+++.++|++..+..+..|+++
T Consensus 93 alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~ 172 (472)
T KOG0634|consen 93 ALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKI 172 (472)
T ss_pred hhccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceE
Confidence 3689999999999999999776 455566777899999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCCCCCCHHHHHhhccc---------CCcEEE-EcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcc
Q 014172 204 VILPTRISENFLLDPKVLESKLTE---------KSRLLI-LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 273 (429)
Q Consensus 204 ~~v~~~~~~~~~~d~e~l~~~l~~---------~~~~i~-l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~ 273 (429)
+.|+++.++ +++|.|++.+.. ++++++ |++.+||||..++.++.++|.++|++| |++||+||+|..
T Consensus 173 ipv~md~~G---i~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKy-DfLIVeDdpYy~ 248 (472)
T KOG0634|consen 173 IPVKMDQDG---IDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKY-DFLIVEDDPYYF 248 (472)
T ss_pred EeccccCCC---CCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHc-CEEEEecCccce
Confidence 999986543 899999998742 467777 688899999999999999999999999 999999999999
Q ss_pred cccCC---C-----C-----------CCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCC
Q 014172 274 IIYAP---A-----T-----------HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG 334 (429)
Q Consensus 274 ~~~~~---~-----~-----------~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~ 334 (429)
+.|+. . + .+++.+++. .+|||.+.||||.++ ||+|+||+.+++-+++.+.......+.+
T Consensus 249 Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDt-dGrVIr~dSFSKiia-PGlRlG~it~~~~~l~ril~~ae~~t~~ 326 (472)
T KOG0634|consen 249 LQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDT-DGRVIRNDSFSKIIA-PGLRLGWITGNSLFLKRILDLAEVATSG 326 (472)
T ss_pred eeccccCCCccccCccccHHHHHHhhcCCcccccc-cccEEeccchhhhhc-CcceeEEeecCHHHHHHHhhhcceeecC
Confidence 88762 1 1 123334443 699999999999998 9999999999999999999888888889
Q ss_pred CchHHHHHHHHHHhcCCC--ChHHHHHHHHHHHHHHHHHHHHhcc-CCC--ceeecCCceEEEEEecCCccCCcccCCCC
Q 014172 335 ASSISQKAGVAALGLGYA--GGEVVSKMVKAFRERRDFLVKSFGE-LEG--VKMSEPQGAFYLFIDFSTYYGSEAEGFGK 409 (429)
Q Consensus 335 ~~~~~q~aa~~~l~~~~~--~~~~~~~~~~~~~~~r~~l~~~L~~-l~g--~~~~~p~~~~~~~~~l~~~~~~~~~~~~~ 409 (429)
++.+.|.++.+.|+.... ..+|+.+++..|..||+.+..+|.+ +|. +++.+|.+|||+|++++.. . ......
T Consensus 327 pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~-~--~~~~~~ 403 (472)
T KOG0634|consen 327 PSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYI-N--FDTKKS 403 (472)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEeccc-c--cccccc
Confidence 999999999998876321 1278999999999999999999998 664 6788999999999999821 1 011111
Q ss_pred CCChHHHHHHHHHhCCeec
Q 014172 410 IENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 410 ~~~~~~~~~~Ll~~~gV~v 428 (429)
+...+++...++.+.||.+
T Consensus 404 i~q~~e~i~~~~vk~gV~~ 422 (472)
T KOG0634|consen 404 INQIEEIIFIKAVKNGVKL 422 (472)
T ss_pred hHHHHHHHHHHHHHCCeEE
Confidence 1236677777777889975
No 96
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=7.5e-40 Score=321.31 Aligned_cols=290 Identities=17% Similarity=0.294 Sum_probs=237.1
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHH
Q 014172 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (429)
Q Consensus 94 g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~ 173 (429)
++++++|+.|+|++++|+.+.+++.+.+.. ..+|++..|..+||+++++++. +++++|++|+|+++++..+++
T Consensus 21 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~aia~~~~------~~~~~I~it~Ga~~al~~~~~ 93 (349)
T PRK07908 21 GPGLLDFAVNVRHDTPPEWLRERLAARLGD-LAAYPSTEDERRARAAVAARHG------RTPDEVLLLAGAAEGFALLAR 93 (349)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHhhH-hhcCCCccchHHHHHHHHHHhC------cChhhEEECCCHHHHHHHHHh
Confidence 457999999999999999999999988754 4679877899999999999973 578999999999999998887
Q ss_pred HhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHH
Q 014172 174 AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEI 253 (429)
Q Consensus 174 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I 253 (429)
+++| .++++.|+|..+...++..|++++.++++. ++.+|++.+ +++++++++++||||||.+++.+ +|
T Consensus 94 --l~~~-~viv~~P~y~~~~~~~~~~G~~i~~v~~~~--~~~~d~~~l----~~~~~~i~l~np~NPTG~~~~~~---~l 161 (349)
T PRK07908 94 --LRPR-RAAVVHPSFTEPEAALRAAGIPVHRVVLDP--PFRLDPAAV----PDDADLVVIGNPTNPTSVLHPAE---QL 161 (349)
T ss_pred --cCCC-eEEEeCCCChHHHHHHHHcCCEEEeeccCc--ccCcChhHh----ccCCCEEEEcCCCCCCCCCcCHH---HH
Confidence 5674 567789999999999999999999999864 267888865 45789999999999999999965 45
Q ss_pred HHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccC
Q 014172 254 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS 333 (429)
Q Consensus 254 ~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~ 333 (429)
.++|+ + +.++|+||+|.++.++ ...++... ..+++++++||||.|+++|+|+||+++++++++.+......+
T Consensus 162 ~~l~~-~-~~~iIvDe~y~~~~~~--~~~~l~~~--~~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~~-- 233 (349)
T PRK07908 162 LALRR-P-GRILVVDEAFADAVPG--EPESLAGD--DLPGVLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGRAHW-- 233 (349)
T ss_pred HHHHh-c-CCEEEEECcchhhccC--Cccccccc--cCCCEEEEeecccccCCccceeeeeecCHHHHHHHHhcCCCC--
Confidence 56665 4 5678889999987543 23444443 246899999999999999999999999999999988765543
Q ss_pred CCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCCh
Q 014172 334 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 413 (429)
Q Consensus 334 ~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~ 413 (429)
..+.+.+.++..++... ..+++++.++.++++|+.+.+.|+++ |+++..|.+|+|+|++++ +.
T Consensus 234 ~~~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~~~~~~~~--------------~~ 296 (349)
T PRK07908 234 PVGTLQLEAIAACCAPR--AVAEAAADAARLAADRAEMVAGLRAV-GARVVDPAAAPFVLVRVP--------------DA 296 (349)
T ss_pred CccHHHHHHHHHHhccc--chHHHHHHHHHHHHHHHHHHHHHHhC-CcEeccCCCceEEEEECC--------------cH
Confidence 35667777776666531 24788899999999999999999998 899888899999999987 24
Q ss_pred HHHHHHHHHhCCeec
Q 014172 414 ESLCRYLLDKAQVLL 428 (429)
Q Consensus 414 ~~~~~~Ll~~~gV~v 428 (429)
.++.+.| +++||.|
T Consensus 297 ~~~~~~l-~~~gI~v 310 (349)
T PRK07908 297 ELLRKRL-RERGIAV 310 (349)
T ss_pred HHHHHHH-HhCCEEE
Confidence 4566555 5669876
No 97
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=3.4e-40 Score=325.31 Aligned_cols=299 Identities=28% Similarity=0.462 Sum_probs=246.0
Q ss_pred HHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEE-ecChH
Q 014172 87 ATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILV-SNGAK 165 (429)
Q Consensus 87 ~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~-t~G~~ 165 (429)
.+++...+.++|+|+.|++++++++.+.+++.+.+.. ...|++. ...+||+++++++. +++++|++ |+|++
T Consensus 26 ~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~-~~~y~~~-~~~~lr~~ia~~~~------~~~~~i~~~~~Ga~ 97 (361)
T PRK00950 26 AREYGIDPESIIKLGSNENPLGPSPKAVEAIEKELSK-IHRYPEP-DAPELREALSKYTG------VPVENIIVGGDGMD 97 (361)
T ss_pred HHHhCCCccceEEccCCCCCCCCCHHHHHHHHHHHHh-hcCCCCC-CHHHHHHHHHHHhC------CCHHHEEEeCCCHH
Confidence 3333334457999999999999989999998887654 4568554 44899999999973 57889999 78999
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCC
Q 014172 166 QSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVY 245 (429)
Q Consensus 166 ~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~ 245 (429)
+++..++++++++||.|++++|+|..|...++..|++++.++.+ ++|.+|++.+++.++++++++++++||||||.++
T Consensus 98 ~~i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~ 175 (361)
T PRK00950 98 EVIDTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKRE--EDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLI 175 (361)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999853 4567999999999988899999999999999999
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHH
Q 014172 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN 325 (429)
Q Consensus 246 ~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~ 325 (429)
+ .++|.++|+++ ++++|+||+|.++. +....+ +....+++++++||||.+|++|+|+||+++++++++.+.
T Consensus 176 ~---~~~l~~l~~~~-~~~li~De~y~~~~--~~~~~~---~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~ 246 (361)
T PRK00950 176 P---EEDIRKILEST-DALVFVDEAYVEFA--EYDYTP---LALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLIDYYM 246 (361)
T ss_pred C---HHHHHHHHHHC-CcEEEEECchhhhC--ccchHH---HHHhcCCEEEEEeehHhhcCchhhcchhcCCHHHHHHHH
Confidence 9 55566677888 99999999999865 221212 222347899999999999999999999999999999888
Q ss_pred HHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCccc
Q 014172 326 KIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAE 405 (429)
Q Consensus 326 ~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~ 405 (429)
+....+ +.+.+.|.++..++.. .+++++.++.++++|+.+.+.|. +.+ .|.+++|+|++++.
T Consensus 247 ~~~~~~--~~~~~~~~~a~~~l~~----~~~~~~~~~~~~~~r~~l~~~l~----~~~-~~~~~~~i~~~~~~------- 308 (361)
T PRK00950 247 RAKTPF--SLTRLSQAAAIAALSD----KEYIEKSIEHGIKSREYLYNELP----FKV-YPSEANFVLVDVTP------- 308 (361)
T ss_pred HhcCCC--CCCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHhhcC----eeE-CCCcceEEEEECCC-------
Confidence 776544 4678899999988874 67888889999999999988875 444 36677899999953
Q ss_pred CCCCCCChHHHHHHHHHhCCeec
Q 014172 406 GFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 406 ~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.++.+++++|.++ ||.|
T Consensus 309 -----~~~~~~~~~l~~~-gv~v 325 (361)
T PRK00950 309 -----MTAKEFCEELLKR-GVIV 325 (361)
T ss_pred -----CCHHHHHHHHHHC-CEEE
Confidence 2788999999875 8876
No 98
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=2.5e-40 Score=324.37 Aligned_cols=297 Identities=28% Similarity=0.466 Sum_probs=252.5
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 174 (429)
.++|+|+.|++++++|+.+.+++.++.. ....|++..+ .++|++++++++ +++++|++|+|+++++..++++
T Consensus 19 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~-~~~~y~~~~~-~~lr~~ia~~~~------~~~~~i~~~~G~~~~l~~~~~~ 90 (346)
T TIGR01141 19 KEVIKLNSNENPFGPPPKAKEALRAEAD-KLHRYPDPDP-AELKQALADYYG------VDPEQILLGNGSDEIIELLIRA 90 (346)
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHhHH-HhhcCCCCCH-HHHHHHHHHHhC------cChHHEEEcCCHHHHHHHHHHH
Confidence 4699999999999999999999998764 3467866555 899999999985 5678999999999999999999
Q ss_pred hcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHH
Q 014172 175 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 254 (429)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~ 254 (429)
++++||+|++++|+|+.|...++..|++++.++++.+ +.+|++.+++.+++++++|++++|+||||.+++.+++++++
T Consensus 91 l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~l~ 168 (346)
T TIGR01141 91 FLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDED--GQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAVL 168 (346)
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCC--CCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 9999999999999999999899999999999998643 66899999999888999999999999999999999999999
Q ss_pred HHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCC
Q 014172 255 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG 334 (429)
Q Consensus 255 ~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~ 334 (429)
+.|+ + ++++|+|++|..+.+.+. ..... ...+++++++||||.+|++|+|+||+++++++++.+...... .+
T Consensus 169 ~~~~-~-~~~ii~D~~y~~~~~~~~-~~~~~---~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~--~~ 240 (346)
T TIGR01141 169 ERTP-E-DALVVVDEAYGEFSGEPS-TLPLL---AEYPNLIVLRTLSKAFGLAGLRIGYAIANAEIIDALNKVRAP--FN 240 (346)
T ss_pred HhCC-C-CcEEEEECchhhhcCCcc-HHHHH---hhCCCEEEEehhhHhhhchhhhceeeecCHHHHHHHHhccCC--CC
Confidence 9987 7 899999999997654321 11111 124578999999999998999999999999999988876543 45
Q ss_pred CchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChH
Q 014172 335 ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSE 414 (429)
Q Consensus 335 ~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 414 (429)
.+.++|.++..+++. ..++++.++.++++++.+.+.|++++|+++. |.+++|+|++++. ++.
T Consensus 241 ~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~g~~~~~~~~~-------------~~~ 302 (346)
T TIGR01141 241 LSRLAQAAAIAALRD----DDFIEKTVEEINAERERLYDGLKKLPGLEVY-PSDANFVLIRFPR-------------DAD 302 (346)
T ss_pred CCHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEC-CCcCCEEEEecCC-------------CHH
Confidence 688999999888875 4578889999999999999999988888865 5567889999863 477
Q ss_pred HHHHHHHHhCCeec
Q 014172 415 SLCRYLLDKAQVLL 428 (429)
Q Consensus 415 ~~~~~Ll~~~gV~v 428 (429)
+++++|.++ ||.+
T Consensus 303 ~~~~~L~~~-gI~v 315 (346)
T TIGR01141 303 ALFEALLEK-GIIV 315 (346)
T ss_pred HHHHHHHHC-CeEE
Confidence 899988765 8876
No 99
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-40 Score=327.68 Aligned_cols=289 Identities=23% Similarity=0.377 Sum_probs=236.3
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 174 (429)
.+.|+|+.|++++++|+.+ .. ....+|+ ..+..+||+++|+++ | +++++|++|+|++++|.+++++
T Consensus 31 ~~~~~l~~ne~~~~~~~~~------~~-~~~~~Yp-~~~~~~Lr~aia~~~----~--~~~~~I~it~Gs~~~i~~~~~~ 96 (354)
T PRK04635 31 RGDIWINANESPFNNEYKL------DL-ARLNRYP-ECQPPELINAYSAYA----G--VAPEQILTSRGADEAIELLIRA 96 (354)
T ss_pred CCcEEeeCCCCCCCCChhh------hh-HHhccCC-CCCHHHHHHHHHHHh----C--cCHHHEEEeCCHHHHHHHHHHH
Confidence 4579999999999988643 11 1246785 456899999999986 3 6889999999999999999999
Q ss_pred hcCCC-CEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHH
Q 014172 175 VCSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEI 253 (429)
Q Consensus 175 l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I 253 (429)
++++| |+|++++|+|..|...++..|++++.+|++. ++.+|++.++. + +++|+|++++||||||.+++.+++++|
T Consensus 97 ~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~~~l~~l 172 (354)
T PRK04635 97 FCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTA--DYQLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDRADIEQL 172 (354)
T ss_pred hcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCC--CCCCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCHHHHHHH
Confidence 99999 9999999999999999999999999999863 46789998874 4 689999999999999999998888888
Q ss_pred HHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccC
Q 014172 254 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS 333 (429)
Q Consensus 254 ~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~ 333 (429)
++.|+ +++||+||+|.+|... .+...+....+++++++||||.||++|+|+||+++++++++.+...... .
T Consensus 173 ~~~~~---~~~vivDeay~~~~~~----~s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~~~~l~~~~~~--~ 243 (354)
T PRK04635 173 IEMTP---DAIVVVDEAYIEFCPE----YSVADLLASYPNLVVLRTLSKAFALAGARCGFTLANEELIEILMRVIAP--Y 243 (354)
T ss_pred HHhCC---CcEEEEeCchHhhccC----cchHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHHHHHHHHhhcCC--C
Confidence 88764 5899999999987532 1333333345789999999999999999999999999999988765443 4
Q ss_pred CCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCCh
Q 014172 334 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 413 (429)
Q Consensus 334 ~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~ 413 (429)
+.+.+.|.++.++|.+. ..+++++.++.++++|+.+.+.|++++++++.+++| .|+|++++ +.
T Consensus 244 ~~~~~~~~~a~~~l~~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g-~f~~~~~~--------------~~ 306 (354)
T PRK04635 244 PVPLPVSEIATQALSEA--GLARMKFQVLDLNAQGARLQAALSMYGGAKVLEGNG-NYVLAKFD--------------DV 306 (354)
T ss_pred CCCHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCC-cEEEEECC--------------CH
Confidence 57788888888888752 246677888899999999999999986688776664 67899886 35
Q ss_pred HHHHHHHHHhCCeec
Q 014172 414 ESLCRYLLDKAQVLL 428 (429)
Q Consensus 414 ~~~~~~Ll~~~gV~v 428 (429)
.++.+.|. ++||.|
T Consensus 307 ~~~~~~l~-~~gv~v 320 (354)
T PRK04635 307 DAVFKALW-DAGIVA 320 (354)
T ss_pred HHHHHHHH-HCCEEE
Confidence 67777664 569876
No 100
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=3e-40 Score=322.21 Aligned_cols=276 Identities=18% Similarity=0.216 Sum_probs=224.3
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 175 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l 175 (429)
++|+|+.|++++++|+..... .. ..+| |... .+||++++++++ +. ++++|++|+|++++|.++. .+
T Consensus 25 ~~i~ls~Nenp~~~~~~~~~~--~~----~~~Y-p~~~-~~L~~~ia~~~~----~~-~~~~I~i~~Gs~e~i~~l~-~~ 90 (339)
T PRK06959 25 AWLDLSTGINPHGYPVPPVPA--DA----WRRL-PEDD-DGLAACAARYYG----AP-DAAHVLPVAGSQAAIRALP-AL 90 (339)
T ss_pred hhceeccCCCCCCCCCCCCCH--HH----HHhC-CCch-HHHHHHHHHHhC----CC-CcccEEECcCHHHHHHHHH-Hh
Confidence 479999999998876222211 11 2357 4444 899999999864 31 3589999999999999665 45
Q ss_pred cCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHH
Q 014172 176 CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIAR 255 (429)
Q Consensus 176 ~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~ 255 (429)
+++|| |+++.|+|+.|...++..|++++.++.+. +.+ .+.++++++|+||||||.+++.+++++|++
T Consensus 91 ~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~--------~~~----~~~~~~v~l~nPnNPTG~~~s~~~l~~l~~ 157 (339)
T PRK06959 91 LPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA--------DTL----PAALTHLIVVNPNNPTAERLPAARLLRWHA 157 (339)
T ss_pred cCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc--------hhc----cccCCEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 78887 88999999999999999999999988642 222 234678999999999999999999999999
Q ss_pred HHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCC
Q 014172 256 IVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGA 335 (429)
Q Consensus 256 ~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~ 335 (429)
.|+++ +.++|+||+|.++.+. .++..+.. .+++|+++||||.||++|+|+||+++++++++.+.+....+ +.
T Consensus 158 ~~~~~-~~~vI~DEay~~~~~~----~s~~~~~~-~~~vi~l~SfSK~~gl~GlRiGy~v~~~~li~~l~~~~~~~--~v 229 (339)
T PRK06959 158 QLAAR-GGTLIVDEAFADTLPA----ASLAAHTD-RPGLVVLRSVGKFFGLAGVRAGFVLAAPALLAALRDALGAW--TV 229 (339)
T ss_pred HHHHc-CCEEEEECCCccCCCc----ccchhccC-CCCEEEEecChhhcCCcchheEEEecCHHHHHHHHHhcCCC--CC
Confidence 99998 8899999999997543 34444432 47799999999999999999999999999999999886654 46
Q ss_pred chHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHH
Q 014172 336 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSES 415 (429)
Q Consensus 336 ~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 415 (429)
+.++|.++.++|++ .++.++.++.++++|+.+.+.|+++ |+++. .+++|+|++++ +..+
T Consensus 230 s~~~q~a~~~~L~~----~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~--~~~~f~~~~~~--------------~~~~ 288 (339)
T PRK06959 230 SGPARHAVRAAFAD----AAWQAAMRERLAADGARLAALLRAH-GFAVH--ATPLFSWTDDP--------------RAAA 288 (339)
T ss_pred cHHHHHHHHHHhCc----HHHHHHHHHHHHHHHHHHHHHHHHC-CCCcc--CcceEEEEeCC--------------CHHH
Confidence 88999999999985 6788899999999999999999998 77664 36799999875 4678
Q ss_pred HHHHHHHhCCeec
Q 014172 416 LCRYLLDKAQVLL 428 (429)
Q Consensus 416 ~~~~Ll~~~gV~v 428 (429)
+.++|.++ ||.|
T Consensus 289 l~~~l~~~-GI~v 300 (339)
T PRK06959 289 LHAALARR-GIWT 300 (339)
T ss_pred HHHHHHhC-CeEE
Confidence 99988776 9976
No 101
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-39 Score=317.57 Aligned_cols=282 Identities=24% Similarity=0.415 Sum_probs=232.0
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~ 173 (429)
.+.|+|+.|+|++++|+.+.+++.+++.. ...+| |..|.++||++++++++ +++++|++|+|+++++..++.
T Consensus 18 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y-~~~g~~~lr~~ia~~~~------~~~~~I~~t~G~~~~l~~~~~ 90 (337)
T PRK03967 18 NYRIWLDKNENPFDLPEELKEEIFEELKRVPFNRY-PHITSDPLREAIAEFYG------LDAENIAVGNGSDELISYLVK 90 (337)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHhhcCccccC-CCCCHHHHHHHHHHHhC------cCcceEEEcCCHHHHHHHHHH
Confidence 46899999999999899999999988754 45678 46799999999999984 688999999999999998877
Q ss_pred HhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHH
Q 014172 174 AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEI 253 (429)
Q Consensus 174 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I 253 (429)
.+ +||+|+++.|+|..|...++..|++++.++++. ++.+|++.+++.+ ++++++++++||||||.+++.+++.+
T Consensus 91 ~~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~~l~~- 164 (337)
T PRK03967 91 LF--EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLKE--DFTIDGERIAEKA-KNASAVFICSPNNPTGNLQPEEEILK- 164 (337)
T ss_pred Hh--CCCeEEEeCCChHHHHHHHHHcCCeEEEeecCC--CCCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHHHHHH-
Confidence 66 799999999999999999999999999999863 4679999998865 57899999999999999999665554
Q ss_pred HHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccC
Q 014172 254 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS 333 (429)
Q Consensus 254 ~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~ 333 (429)
++ ++ +++||+||+|.+|.. ... ..+....+++|+++||||.||++|+|+||+++++++++.+.+....+
T Consensus 165 --i~-~~-~~~ii~De~y~~~~~--~~~---~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~~~~~~~~-- 233 (337)
T PRK03967 165 --VL-ET-GKPVVLDEAYAEFSG--KSL---IGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDALYRIKPPF-- 233 (337)
T ss_pred --HH-hc-CCEEEEECchhhhcc--cch---HHHHhhCCCEEEEecchHhhcchhhhheeeecCHHHHHHHHhhcCCC--
Confidence 45 47 899999999998752 111 12222247899999999999999999999999999999998876543
Q ss_pred CCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCCh
Q 014172 334 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 413 (429)
Q Consensus 334 ~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~ 413 (429)
+.+.++|.++..+|++ .+++.+.++.+.++|+.+.+.|.+. ..|.+++|+|++++
T Consensus 234 ~~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~r~~l~~~L~~~-----~~~~~~~~~~~~~~---------------- 288 (337)
T PRK03967 234 SLNILTMKIVRLALDH----YDLIEERIDYIIKERERVRRELGEY-----AYPSDANFLLLKLD---------------- 288 (337)
T ss_pred CCCHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHHHHHhccC-----cCCCCCcEEEEhHH----------------
Confidence 5789999999999975 4567766677778888888888764 24788999998762
Q ss_pred HHHHHHHHHhCCeec
Q 014172 414 ESLCRYLLDKAQVLL 428 (429)
Q Consensus 414 ~~~~~~Ll~~~gV~v 428 (429)
+++.|+++ ||.|
T Consensus 289 --~~~~l~~~-gi~v 300 (337)
T PRK03967 289 --AYDYLLEN-GIVV 300 (337)
T ss_pred --HHHHHHHC-CEEE
Confidence 56666654 8876
No 102
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=2.5e-39 Score=314.91 Aligned_cols=272 Identities=19% Similarity=0.256 Sum_probs=221.2
Q ss_pred CeEEcCCCCCCCCCh-HHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHH
Q 014172 96 SVIRLAAGEPDFDTP-VLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p-~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 174 (429)
++|+|+.|++++++| +.+.+ ..+ ..| |. +..+||++|++++ .+++|++|+|++++|.+++
T Consensus 21 ~~i~l~~ne~p~~~~~~~~~~---~~~----~~y-p~-~~~~Lr~~ia~~~--------~~~~I~it~Gs~~al~~~~-- 81 (330)
T PRK05664 21 DWLDLSTGIAPWPWPVPAIPA---DAW----ARL-PE-TDDGLEAAARAYY--------GAPQLLPVAGSQAAIQALP-- 81 (330)
T ss_pred HheeecCCcCCCCCCCcccCH---HHH----HhC-CC-ChHHHHHHHHHHh--------CCCCEEECcCHHHHHHHHH--
Confidence 479999999887665 33322 222 246 33 3489999999997 3479999999999999775
Q ss_pred hcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHH
Q 014172 175 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 254 (429)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~ 254 (429)
.+.+||+|++++|+|+.|...++..|++++.+|++ .+++.+ ++++++++++||||||.+++.+++++|+
T Consensus 82 ~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~----------~~~~~~-~~~~~v~l~nP~NPTG~~~s~~~l~~l~ 150 (330)
T PRK05664 82 RLRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDEA----------EVEAAL-DSLDVLVVVNPNNPTGRRFDPARLLAWH 150 (330)
T ss_pred HccCCCEEEEcCCChHHHHHHHHHcCCeEEEechh----------hHhhhh-cCCCEEEEeCCcCCCCCccCHHHHHHHH
Confidence 35799999999999999999999999999999852 244444 3678899999999999999999999999
Q ss_pred HHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCC
Q 014172 255 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG 334 (429)
Q Consensus 255 ~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~ 334 (429)
++|+++ +++||+||+|.++. ...++..+.. .+++++++||||.||++|+|+||+++++++++.+.+....+ +
T Consensus 151 ~~~~~~-~~~iI~DE~y~~~~----~~~s~~~~~~-~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~~~~~~~~~~--~ 222 (330)
T PRK05664 151 ARLAAR-GGWLVVDEAFMDNT----PQHSLAACAH-RPGLIVLRSFGKFFGLAGARLGFVLAEPALLRALAELLGPW--T 222 (330)
T ss_pred HHHHhc-CCEEEEECCcccCC----Cccccccccc-CCCEEEEeeccccccCCCcceEEEEeCHHHHHHHHHhcCCC--C
Confidence 999999 99999999998753 1235555543 57899999999999999999999999999999998775543 4
Q ss_pred CchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCce--EEEEEecCCccCCcccCCCCCCC
Q 014172 335 ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGA--FYLFIDFSTYYGSEAEGFGKIEN 412 (429)
Q Consensus 335 ~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~--~~~~~~l~~~~~~~~~~~~~~~~ 412 (429)
.+.+.|.++..+|.+ ..+.++.++.++++|+.+.+.|+++ |++ |.++ +|+|++++ +
T Consensus 223 ~~~~~~~~~~~~L~~----~~~~~~~~~~~~~~r~~l~~~L~~~-~~~---~~~~~~~f~~~~~~--------------~ 280 (330)
T PRK05664 223 VSGPTRWLAQAALAD----TPWQRRQRERLLAASQRLAALLRRH-GLT---PAGGCALFQWVRTE--------------D 280 (330)
T ss_pred CCHHHHHHHHHHHhC----hHHHHHHHHHHHHHHHHHHHHHHHC-CCc---ccCCcceEEEEecC--------------C
Confidence 678999999999985 4667888999999999999999987 664 4444 78888764 5
Q ss_pred hHHHHHHHHHhCCeec
Q 014172 413 SESLCRYLLDKAQVLL 428 (429)
Q Consensus 413 ~~~~~~~Ll~~~gV~v 428 (429)
+.++++.|.++ ||.|
T Consensus 281 ~~~~~~~l~~~-gi~v 295 (330)
T PRK05664 281 AAALHEFLARR-GILT 295 (330)
T ss_pred HHHHHHHHHHC-CeEE
Confidence 67888887655 9976
No 103
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=5.3e-39 Score=312.73 Aligned_cols=294 Identities=22% Similarity=0.337 Sum_probs=242.0
Q ss_pred HHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEec
Q 014172 83 ITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSN 162 (429)
Q Consensus 83 ~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~ 162 (429)
+...++++..++++.|+|+.|+|++++| ..+... +...+|++..+ +++|++++++++ +++++|++|+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~y~~~~~-~~lr~~la~~~~------~~~~~i~~t~ 71 (330)
T TIGR01140 5 LRRAAARYGIPPEDWLDFSTGINPLGPP--VPPIPA----SAWARYPDPEY-DELRAAAAAYYG------LPAASVLPVN 71 (330)
T ss_pred HHHHHHHcCCChhheeEccccCCCCCCC--hhhcch----HHHhhCCCccH-HHHHHHHHHHhC------CChhhEEECC
Confidence 3445566666677899999999888876 222211 22467865555 999999999873 5689999999
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCcc
Q 014172 163 GAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTG 242 (429)
Q Consensus 163 G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG 242 (429)
|+++++..+..+ +.+| .|++++|+|..|...++..|.+++.++ |++.+++.+ ++++++++++||||||
T Consensus 72 G~~~~i~~~~~~-l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~---------d~~~l~~~~-~~~~~v~i~~p~NPtG 139 (330)
T TIGR01140 72 GAQEAIYLLPRL-LAPG-RVLVLAPTYSEYARAWRAAGHEVVELP---------DLDRLPAAL-EELDVLVLCNPNNPTG 139 (330)
T ss_pred CHHHHHHHHHHH-hCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC---------CHHHHHhhc-ccCCEEEEeCCCCCCC
Confidence 999999987665 5777 699999999999999999999998886 788898888 4688999999999999
Q ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHH
Q 014172 243 SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVA 322 (429)
Q Consensus 243 ~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~ 322 (429)
.+++.+++++|+++|++| |++||+||+|.++.+.. ++..+....+++++++||||.+|++|+|+||+++++++++
T Consensus 140 ~~~~~~~~~~l~~~a~~~-~~~ii~De~y~~~~~~~----~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~ 214 (330)
T TIGR01140 140 RLIPPETLLALAARLRAR-GGWLVVDEAFIDFTPDA----SLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALLA 214 (330)
T ss_pred CCCCHHHHHHHHHHhHhc-CCEEEEECcccccCCcc----chhhHhccCCCEEEEEecchhhcCchhhhhheeCCHHHHH
Confidence 999999999999999999 99999999999876531 2333222357899999999999999999999999999999
Q ss_pred HHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCC
Q 014172 323 ACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGS 402 (429)
Q Consensus 323 ~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~ 402 (429)
.+...... .+.+.++|.++..++++ .+|.++.++.++++++.+.+.|++++++++. |.+++|+|++++
T Consensus 215 ~l~~~~~~--~~~s~~~q~~~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~f~~~~~~----- 282 (330)
T TIGR01140 215 RLREALGP--WTVNGPARAAGRAALAD----TAWQAATRARLAAERARLAALLARLGGLEVV-GGTALFLLVRTP----- 282 (330)
T ss_pred HHHhcCCC--CCchHHHHHHHHHHHhc----hHHHHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCeEEEEEcC-----
Confidence 98876543 34688999999999985 5677888999999999999999998556664 567899999886
Q ss_pred cccCCCCCCChHHHHHHHHHhCCeec
Q 014172 403 EAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 403 ~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+..+++++|+++ ||.+
T Consensus 283 ---------~~~~l~~~l~~~-gi~v 298 (330)
T TIGR01140 283 ---------DAAALHEALARR-GILI 298 (330)
T ss_pred ---------CHHHHHHHHHHC-CEEE
Confidence 467899999875 8875
No 104
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=2e-38 Score=318.99 Aligned_cols=333 Identities=17% Similarity=0.215 Sum_probs=263.1
Q ss_pred ccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCC--CCCChH---HHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHH
Q 014172 70 PRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP--DFDTPV---LIAEAGINAIREGFTRYTPNAGTLELRSAICHK 144 (429)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~--~~~~p~---~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~ 144 (429)
-|++.++++.+..+.++++.++++|.++|+|++|+| |+.+|. .+.+++.+++..+..+|++..|..+||++++++
T Consensus 11 ~r~~~v~~~~~~~~~~~~~~l~~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g~~~Y~~~~g~~~Lreaia~~ 90 (460)
T PRK13238 11 FRIKMVEPIRLTTREERERALAEAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRGDEAYAGSRSYYRLEDAVKDI 90 (460)
T ss_pred eeeceeccccccCHHHHHHHHHHcCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhCCcccCCCCCHHHHHHHHHHH
Confidence 456778888888899999999999999999999998 788865 688999998887788999999999999999999
Q ss_pred HHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCC------CCCC--C
Q 014172 145 LKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRIS------ENFL--L 216 (429)
Q Consensus 145 l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~------~~~~--~ 216 (429)
++ .++|++|+|+++++.++++++++||| |++++|.|..|...++..|++++.+++++. ++|. +
T Consensus 91 ~~--------~~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~i 161 (460)
T PRK13238 91 FG--------YPYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNF 161 (460)
T ss_pred hC--------CCcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCc
Confidence 74 35799999999999999999999999 999999999999999999999999998642 3454 9
Q ss_pred CHHHHHhhccc----CCcEEEEcCCCCCcc-CCCCHHHHHHHHHHHHhCCCeEEEEccCCc--ccccCC-----CCCCcc
Q 014172 217 DPKVLESKLTE----KSRLLILCSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYE--HIIYAP-----ATHTSF 284 (429)
Q Consensus 217 d~e~l~~~l~~----~~~~i~l~~p~NPtG-~~~~~~~l~~I~~~a~~~~~i~vi~Deay~--~~~~~~-----~~~~~~ 284 (429)
|++.|++.+++ ++++|++++|+|||| .+++.+++++|.++|++| |++||+|+++. ...|.. ....++
T Consensus 162 d~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~-gi~li~Daa~~~e~a~f~~~~e~g~~~~si 240 (460)
T PRK13238 162 DLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKY-GIPVVIDAARFAENAYFIKQREPGYKDKSI 240 (460)
T ss_pred CHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEECcchhhhhhhhhhccccccCCCH
Confidence 99999999974 699999999999998 999999999999999999 99999999763 343422 122232
Q ss_pred ccCCCCCCceEEEeccChhcccccceee------EEEcC-HHHHHHHHHHh----hcccCCC-chHHHHHHHHHHhcCCC
Q 014172 285 ASLPGMWERTLTVNGFSKAFAMTGWRLG------YIAGP-KHFVAACNKIQ----SQFTSGA-SSISQKAGVAALGLGYA 352 (429)
Q Consensus 285 ~~~~~~~~~~i~~~S~SK~~~~~G~R~G------~v~~~-~~~~~~l~~~~----~~~~~~~-~~~~q~aa~~~l~~~~~ 352 (429)
.++ +..++|++|.+.++|||+| |++++ +++++.++... ...+++. +...|.|+...|....
T Consensus 241 ~~i------~~~~~s~~D~~~~Sg~K~g~~~~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~- 313 (460)
T PRK13238 241 KEI------AREMFSYADGLTMSAKKDAMVNIGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGM- 313 (460)
T ss_pred HHH------hhhhcccCcEEEEecccCCCCcceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhh-
Confidence 222 2446788888888888863 55666 57888877663 2223343 4445777776665311
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccC-CcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 353 GGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG-SEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 353 ~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.++++..+ .+++++|.+.|.+. |+.+..|.||||+++++..... ....++ .+.+|+.+|+++.||.+
T Consensus 314 ~~~~~~~~----~~~~~~l~~~L~~~-G~~~~~p~Gg~~v~~d~~~~~~~~~~~~~----~~~~~a~~L~~e~GV~~ 381 (460)
T PRK13238 314 DEDYLAYR----IGQVEYLGEGLEEA-GVPIQTPAGGHAVFVDAGKFLPHIPAEQF----PAQALACELYLEAGIRG 381 (460)
T ss_pred ChHHHHHH----HHHHHHHHHHHHHC-CCCeEccCCceEEEEEchhcCCCCCCCCC----chHHHHHHHHHHcCeee
Confidence 13344333 33689999999987 9999999999999999976421 011111 46899999999999985
No 105
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-38 Score=297.90 Aligned_cols=295 Identities=22% Similarity=0.381 Sum_probs=256.1
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhhcC--CCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHH-cCCE
Q 014172 126 TRYTPNAGTLELRSAICHKLKEENG--LSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI-ADAT 202 (429)
Q Consensus 126 ~~Y~~~~G~~~lr~~ia~~l~~~~g--~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~-~g~~ 202 (429)
..|.+-.|.+.+|+++|+++.+..| ++++|+++++++|+|.+.+.++..|++|||.-|+|.|.|+++-.-++. .|++
T Consensus 115 a~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgve 194 (471)
T KOG0256|consen 115 AMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVE 194 (471)
T ss_pred hhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCce
Confidence 4577778999999999999998766 458899999999999999999999999999999999999998766654 6999
Q ss_pred EEEecCCCCCCCCCCHHHHHhhccc------CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCccccc
Q 014172 203 PVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIY 276 (429)
Q Consensus 203 ~~~v~~~~~~~~~~d~e~l~~~l~~------~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~ 276 (429)
++.|.+..+++|.++++.+|+++.. +.|.|+|+||+||.|+++++|++..++++|.++ |+.||+||+|..-+|
T Consensus 195 ivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~k-niHvI~DEIya~sVF 273 (471)
T KOG0256|consen 195 IVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRK-NIHVISDEIYAGSVF 273 (471)
T ss_pred EEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhc-ceEEEeehhhccccc
Confidence 9999999999999999999998853 789999999999999999999999999999999 999999999999999
Q ss_pred CCCCCCccccCCC----CCCceEEEeccChhcccccceeeEEEc-CHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCC
Q 014172 277 APATHTSFASLPG----MWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGY 351 (429)
Q Consensus 277 ~~~~~~~~~~~~~----~~~~~i~~~S~SK~~~~~G~R~G~v~~-~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~ 351 (429)
+.....++.++.. ..+++-++.|+||-+|+||+|+|.+.. +++++.+..++.+.. ..|+..|..+...|.+.+
T Consensus 274 ~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~--~vSs~tQ~~la~LLSD~~ 351 (471)
T KOG0256|consen 274 DKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFG--LVSSQTQYLLASLLSDEE 351 (471)
T ss_pred CccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhcc--CCcHHHHHHHHHHhchHH
Confidence 9877777766422 368899999999999999999999986 567777777765543 478999999999999855
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 352 AGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 352 ~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
..+.++++..++++.+.+++.+.|+++ |+.+.+..+|+|+|+++..+.... ..+.+.++.++++++-+|.+|
T Consensus 352 f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl~s~AGlF~wvDlr~lL~s~-----tfe~El~Lw~~i~~~vklnlS 423 (471)
T KOG0256|consen 352 FTREYLRENNKRLRIRHRYIVEGLKAL-GIPCLKSNAGLFCWVDLRKLLTSL-----TFEGELELWERILDNVKLNLS 423 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHhc-CCceeecCCeeEEEEEhHHhcCcC-----ChHHHHHHHHHHHHhhccccC
Confidence 456778889999999999999999999 999999999999999998764321 113577899999988676654
No 106
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=2e-37 Score=299.10 Aligned_cols=269 Identities=20% Similarity=0.353 Sum_probs=211.1
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 175 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l 175 (429)
++|+|+.|+++++ |+.+.+++.+++.. ..+|+. ...||+++++++. ++|++|+|+++++..++..+
T Consensus 9 ~~i~l~~~~np~~-p~~~~~a~~~~~~~-~~~yp~---~~~l~~~ia~~~~---------~~I~vt~G~~~al~~~~~~~ 74 (311)
T PRK08354 9 GLIDFSASVNPYP-PEWLDEMFERAKEI-SGRYTY---YEWLEEEFSKLFG---------EPIVITAGITEALYLIGILA 74 (311)
T ss_pred ceeEecCCCCCCC-CHHHHHHHHHHHHH-hhcCCC---hHHHHHHHHHHHC---------CCEEECCCHHHHHHHHHHhh
Confidence 5899999998886 57888888877653 456742 4789999998863 47999999999999877544
Q ss_pred cCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHH
Q 014172 176 CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIAR 255 (429)
Q Consensus 176 ~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~ 255 (429)
.+||+|++++|+|+.|...++..|++++.++ +|++.+++.+. +++++++++||||||.+++.+++++|++
T Consensus 75 -~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~--------~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~~~l~~l~~ 144 (311)
T PRK08354 75 -LRDRKVIIPRHTYGEYERVARFFAARIIKGP--------NDPEKLEELVE-RNSVVFFCNPNNPDGKFYNFKELKPLLD 144 (311)
T ss_pred -CCCCeEEEeCCCcHHHHHHHHHcCCEEeecC--------CCHHHHHHhhc-CCCEEEEecCCCCCCCccCHHHHHHHHH
Confidence 4899999999999999999999999997653 57889988876 5788999999999999999999999999
Q ss_pred HHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCC
Q 014172 256 IVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGA 335 (429)
Q Consensus 256 ~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~ 335 (429)
+|++| |++||+||+|.+|.+++.. .. .+++++++||||.|+++|+|+||+++ +++.+.+....+. .
T Consensus 145 ~a~~~-~~~li~De~y~~f~~~~~~------~~--~~~vi~~~S~SK~~~l~GlRiG~~v~---~~~~l~~~~~~~~--~ 210 (311)
T PRK08354 145 AVEDR-NALLILDEAFIDFVKKPES------PE--GENIIKLRTFTKSYGLPGIRVGYVKG---FEEAFRSVRMPWS--I 210 (311)
T ss_pred Hhhhc-CcEEEEeCcchhccccccc------cC--CCcEEEEeccHhhcCCccceeeeeee---hHHHHHHcCCCcc--C
Confidence 99999 9999999999999886421 11 57899999999999999999999998 5566666554433 4
Q ss_pred chHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHH
Q 014172 336 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSES 415 (429)
Q Consensus 336 ~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 415 (429)
+...+.++..+++. ..+++.+.++.++++++.+.+.+ ..+|+++||+ ++++ ++.+
T Consensus 211 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~l-------~~~~~~~~~~-~~~~--------------~~~~ 265 (311)
T PRK08354 211 GSTGYAFLEFLIED---DFEHLRKTMPLIWREKERFEKAL-------YVKSDANFFI-KDVG--------------DAEK 265 (311)
T ss_pred CHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHhc-------CCCCCCcEEE-EECC--------------CHHH
Confidence 55667666666653 23556666666666666554443 1357777765 5653 4678
Q ss_pred HHHHHHHhCCeec
Q 014172 416 LCRYLLDKAQVLL 428 (429)
Q Consensus 416 ~~~~Ll~~~gV~v 428 (429)
+++.|.++ ||.|
T Consensus 266 ~~~~l~~~-gv~v 277 (311)
T PRK08354 266 FVEFLKRN-GILV 277 (311)
T ss_pred HHHHHHHC-CeEE
Confidence 99887655 8876
No 107
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=4.7e-34 Score=279.45 Aligned_cols=314 Identities=36% Similarity=0.631 Sum_probs=261.0
Q ss_pred EEcCCCCCCCCChHHHHHHHHH-HHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhc
Q 014172 98 IRLAAGEPDFDTPVLIAEAGIN-AIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC 176 (429)
Q Consensus 98 i~L~~g~~~~~~p~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~ 176 (429)
|+|+.|.+++.+++.++.++.+ ........|.+..|..++++.+++++...+|....++++++++|+++++..++.++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~ 80 (350)
T cd00609 1 IDLSIGEPDFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL 80 (350)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC
Confidence 5789999998887777776664 222345678888999999999999999888766667899999999999999999999
Q ss_pred CCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHH
Q 014172 177 SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARI 256 (429)
Q Consensus 177 ~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~ 256 (429)
++||+|+++.|+|.++...++..|.+++.++.+..+....+.+.++....+++++|++++|+||||.+++.+++++|.++
T Consensus 81 ~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~ 160 (350)
T cd00609 81 NPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAEL 160 (350)
T ss_pred CCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHHHHHH
Confidence 99999999999999999999999999999998755543333367777777899999999999999999999999999999
Q ss_pred HHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCH-HHHHHHHHHhhcccCCC
Q 014172 257 VAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK-HFVAACNKIQSQFTSGA 335 (429)
Q Consensus 257 a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~-~~~~~l~~~~~~~~~~~ 335 (429)
|+++ |+++|+|++|+.+.+.+...... ......+.+++++|++|.++++|.|+||+++++ ++.+.+.........++
T Consensus 161 ~~~~-~~~~ivD~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~ 238 (350)
T cd00609 161 AKKH-GILIISDEAYAELVYDGEPPPAL-ALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPYTTSGP 238 (350)
T ss_pred HHhC-CeEEEEecchhhceeCCcccccc-cCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHHhcccCC
Confidence 9999 99999999999887765432211 122335778999999999998999999999999 89999888777766788
Q ss_pred chHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHH
Q 014172 336 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSES 415 (429)
Q Consensus 336 ~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 415 (429)
+...+.++..+++. ..++.++.++.++++++++.+.|++.+...+..+.+++|+|++++.. ...+
T Consensus 239 ~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~------------~~~~ 303 (350)
T cd00609 239 STLSQAAAAAALDD---GEEHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEG------------DDEE 303 (350)
T ss_pred ChHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCC------------ChHH
Confidence 99999999999986 33778899999999999999999997444435678899999998752 3456
Q ss_pred HHHHHHHhCCeec
Q 014172 416 LCRYLLDKAQVLL 428 (429)
Q Consensus 416 ~~~~Ll~~~gV~v 428 (429)
++.++++++||.+
T Consensus 304 ~~~~~l~~~gi~i 316 (350)
T cd00609 304 FLERLLLEAGVVV 316 (350)
T ss_pred HHHHHHHhCCEEE
Confidence 6677777778875
No 108
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=100.00 E-value=2.6e-35 Score=292.59 Aligned_cols=317 Identities=19% Similarity=0.181 Sum_probs=246.6
Q ss_pred HHHHHHhcCCCeEEcCCCCC--CCCCh---HHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEE
Q 014172 86 QATALAQAGVSVIRLAAGEP--DFDTP---VLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILV 160 (429)
Q Consensus 86 ~~~~~~~~g~~~i~L~~g~~--~~~~p---~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~ 160 (429)
+.+.+++.|.+++.|..+++ |+.++ ..+.+++..++..+...|+++.|..+|+++++++++ .+++++
T Consensus 2 r~~~l~~~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~gd~~Y~~~~g~~~Leeaia~~~g--------~~~vv~ 73 (431)
T cd00617 2 RERALKEAGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMMLGDEAYAGSKSFYDLEDAVQDLFG--------FKHIIP 73 (431)
T ss_pred hHHHHHHcCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHhCCCccCCCCCHHHHHHHHHHHHC--------CCeEEE
Confidence 46678889999999999999 77776 478888888887777789999999999999999974 358999
Q ss_pred ecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCC--------CCCCHHHHHhhcccC----
Q 014172 161 SNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISEN--------FLLDPKVLESKLTEK---- 228 (429)
Q Consensus 161 t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~--------~~~d~e~l~~~l~~~---- 228 (429)
|+|+++++.+++.++++|||+| +++|.|..|...+...|++++.++++++.+ +.+|++.|+++++++
T Consensus 74 t~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~ 152 (431)
T cd00617 74 THQGRGAENILFSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAEN 152 (431)
T ss_pred cCCHHHHHHHHHHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCC
Confidence 9999999999999999999988 699999999999999999999999975432 459999999999865
Q ss_pred CcEEEEcCCCCCc-cCCCCHHHHHHHHHHHHhCCCeEEEEccCCcc--ccc-----CCCCCCccccCCCCCCceEEEecc
Q 014172 229 SRLLILCSPSNPT-GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH--IIY-----APATHTSFASLPGMWERTLTVNGF 300 (429)
Q Consensus 229 ~~~i~l~~p~NPt-G~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~--~~~-----~~~~~~~~~~~~~~~~~~i~~~S~ 300 (429)
+++|++++|+||+ |.+++.+++++|.++|++| |++||+|++... ..| ++....++. +.++.++|+
T Consensus 153 ~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~-gi~li~DaAr~~~na~~i~~r~~g~~~~si~------ei~~e~~s~ 225 (431)
T cd00617 153 IPYIVLTITNNTAGGQPVSMANLREVRELAHKY-GIPVVLDAARFAENAYFIKEREEGYRDKSIA------EIAREMFSY 225 (431)
T ss_pred ccEEEEECCcCCCCCccCCHHHHHHHHHHHHHc-CCEEEEEchhhHhhhhhhhcccccccCCCHH------HHHHHhhcc
Confidence 7889999999998 9999999999999999999 999999999432 122 222233333 234568899
Q ss_pred Chhcccccce------eeEEEcCH-HHHHHHHHHhh----cccCC-CchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Q 014172 301 SKAFAMTGWR------LGYIAGPK-HFVAACNKIQS----QFTSG-ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERR 368 (429)
Q Consensus 301 SK~~~~~G~R------~G~v~~~~-~~~~~l~~~~~----~~~~~-~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r 368 (429)
+|.+.|+||| .||+++++ ++++.++.... ..+++ .+.....++..+|... .+ .+.+.+.++ +|
T Consensus 226 sd~~~mS~~K~~~~~~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~---~~-~~~l~~~~~-~r 300 (431)
T cd00617 226 ADGCTMSAKKDGLVNIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREA---VE-EDYLRHRVE-QV 300 (431)
T ss_pred CCEEEEEeecCCCCccceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhc---cc-HHHHHHHHH-HH
Confidence 9999999998 67999986 58888775321 11122 2333333333355431 11 223333444 66
Q ss_pred HHHHHHhccCCCceeecCCceEEEEEecCCccC-CcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 369 DFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG-SEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 369 ~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+++.+.|.+. |+.+..|.|++|+|++++...+ ...++ .++.+|+.+|+++.||.+
T Consensus 301 ~~l~~~L~~~-G~~v~~P~Ggh~v~~d~~~~~~~~~~~~----~~~~~la~~L~~e~gV~~ 356 (431)
T cd00617 301 RYLGDRLDEA-GVPIVEPAGGHAVFIDAREFLPHIPQEQ----FPAQALAAELYLEAGVRA 356 (431)
T ss_pred HHHHHHHHHC-CCCccCCCcceEEEEEhHHhcCCCCccc----CcHHHHHHHHHHHcCeeE
Confidence 9999999998 9999999999999999986421 01111 168999999999999974
No 109
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-32 Score=252.57 Aligned_cols=359 Identities=23% Similarity=0.362 Sum_probs=271.1
Q ss_pred CcccccccCCchhHHHHHHHHHHHhcCC--------CeEEcCCCCCC----------------------CC---ChHHHH
Q 014172 68 LSPRVNAVKPSKTVAITDQATALAQAGV--------SVIRLAAGEPD----------------------FD---TPVLIA 114 (429)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~--------~~i~L~~g~~~----------------------~~---~p~~v~ 114 (429)
+++.+.+.+......|.-++.++++..+ ++|+-++|+|- +. -|..++
T Consensus 13 ~N~~V~k~eYAVRG~i~~rA~El~~eL~~~~~~PF~eiI~aNIGnpqamgQ~PiTF~RQvlal~~~p~lLd~~~fp~Dai 92 (475)
T KOG0258|consen 13 LNPNVKKAEYAVRGPIVIRADELEKELKKGVKKPFDEIIRANIGNPQAMGQKPITFLRQVLALCQYPELLDSPEFPTDAI 92 (475)
T ss_pred cChhhhhhhhhhccchhhhHHHHHHHHHhcccCChHHHHhhcCCCHHHhCCCChhHHHHHHHHhcChhhcCCCCCCHHHH
Confidence 5555665554433344444544443211 37888888763 11 144555
Q ss_pred HHHHHHHHc---CCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcC-CCCEEEEcCCCCC
Q 014172 115 EAGINAIRE---GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS-PGDEVIIPAPFWV 190 (429)
Q Consensus 115 ~a~~~~~~~---~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~-~gd~Vlv~~p~y~ 190 (429)
+...+.+.. ....|+.++|.+-+|+.+|+++.++-|.+.+|++|++|.|++.++..++..++. +.+.|++|-|.|+
T Consensus 93 ~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYP 172 (475)
T KOG0258|consen 93 KRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYP 172 (475)
T ss_pred HHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCc
Confidence 555555543 245799999999999999999999999889999999999999999999998874 6799999999999
Q ss_pred ChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-----CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEE
Q 014172 191 SYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-----KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLV 265 (429)
Q Consensus 191 ~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-----~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~v 265 (429)
-|...+...|+..+.+-++++++|.+|.++|++.+++ +++++++.||.||||.+++++.+++|..+|.++ ++++
T Consensus 173 LYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~-~l~l 251 (475)
T KOG0258|consen 173 LYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEE-GLVL 251 (475)
T ss_pred hhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHc-CeEE
Confidence 9999999999999999999999999999999998864 689999999999999999999999999999999 9999
Q ss_pred EEccCCcccccCCC-CCCcccc----CCCCCC-c--eEEEeccChhc-ccccceeeEEEc---CHHHHHHHHHHhhcccC
Q 014172 266 LSDEIYEHIIYAPA-THTSFAS----LPGMWE-R--TLTVNGFSKAF-AMTGWRLGYIAG---PKHFVAACNKIQSQFTS 333 (429)
Q Consensus 266 i~Deay~~~~~~~~-~~~~~~~----~~~~~~-~--~i~~~S~SK~~-~~~G~R~G~v~~---~~~~~~~l~~~~~~~~~ 333 (429)
+.||+|.+-+|.+. ...++.. +...+. + .+.++|.||.+ |=+|.|-||.-. +++..+.+.+... ...
T Consensus 252 laDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~s-i~l 330 (475)
T KOG0258|consen 252 LADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLAS-IKL 330 (475)
T ss_pred echHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHh-hhh
Confidence 99999999998753 4445433 222222 2 46788889998 458999999753 5677777766544 345
Q ss_pred CCchHHHHHHHHHHhcCCCC----h---HHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccC-Cccc
Q 014172 334 GASSISQKAGVAALGLGYAG----G---EVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG-SEAE 405 (429)
Q Consensus 334 ~~~~~~q~aa~~~l~~~~~~----~---~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~-~~~~ 405 (429)
|++..+|...-....-+.-. + ...+.+...+++|...+.+.++.++|+.+.+++|+||+|.++.=... ..++
T Consensus 331 c~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY~fP~i~lP~kaie~A 410 (475)
T KOG0258|consen 331 CPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMYLFPQISLPPKAIEAA 410 (475)
T ss_pred cCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCccceeecccccCCHHHHHHH
Confidence 67777777665555421111 1 22445777888999999999999999999999999999966632111 1111
Q ss_pred CCCCCCChHHHHHHHHHhCCeec
Q 014172 406 GFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 406 ~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.-.++..+.-.|.+||+..||++
T Consensus 411 ~~~~~~PD~FYc~~LLe~tGIcv 433 (475)
T KOG0258|consen 411 KALGIAPDEFYCLKLLEATGICV 433 (475)
T ss_pred HHhCCCCcHHHHHHHHHhcCeEE
Confidence 12233567788999999999986
No 110
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=100.00 E-value=3.9e-31 Score=264.02 Aligned_cols=301 Identities=18% Similarity=0.181 Sum_probs=226.5
Q ss_pred cCCCeEEcCCCC-CCCCChHHHHHHHHHHHHcCCCCCC---CCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 93 AGVSVIRLAAGE-PDFDTPVLIAEAGINAIREGFTRYT---PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 93 ~g~~~i~L~~g~-~~~~~p~~v~~a~~~~~~~~~~~Y~---~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
.|+++|+|+.|+ +++++++.+.+++.+.+.+....|. ...|..++++++++++.+.+|. +++|++|+| ++++
T Consensus 40 ~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~i~~tsG-~~a~ 115 (397)
T PRK06939 40 DGKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGT---EDAILYSSC-FDAN 115 (397)
T ss_pred CCCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCC---CcEEEEcCh-HHHH
Confidence 578899999998 7888899999999998865323332 2468899999999999998883 367888888 6788
Q ss_pred HHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------CCcEEEEcCCCCCcc
Q 014172 169 LQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTG 242 (429)
Q Consensus 169 ~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~~~~i~l~~p~NPtG 242 (429)
..++++++++||+|++++|+|+++...++..|++++.++. .|++.+++.+++ ++++|++.+.+||+|
T Consensus 116 ~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G 188 (397)
T PRK06939 116 GGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFSMDG 188 (397)
T ss_pred HHHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCC
Confidence 8889999999999999999999999999999999888764 378888877753 677777777899999
Q ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHH
Q 014172 243 SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVA 322 (429)
Q Consensus 243 ~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~ 322 (429)
...+ +++|.++|++| +++||+||+|....++...........-..+.+++++||||.++ |+|+||+++++++++
T Consensus 189 ~~~~---~~~l~~la~~~-~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~--g~r~G~v~~~~~~~~ 262 (397)
T PRK06939 189 DIAP---LPEICDLADKY-DALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALG--GASGGYTAGRKEVID 262 (397)
T ss_pred CcCC---HHHHHHHHHHh-CCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhC--ccCceEEEeCHHHHH
Confidence 9777 99999999999 99999999996432221111111111111245799999999994 679999999999999
Q ss_pred HHHHHhhcc--cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCcc
Q 014172 323 ACNKIQSQF--TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYY 400 (429)
Q Consensus 323 ~l~~~~~~~--~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~ 400 (429)
.+......+ ....+...+.++.++++. . +...+++++++++++++.+.|+++ |+++..+.++++. +.++..
T Consensus 263 ~l~~~~~~~~~~~~~~~~~~~a~~~al~~---~-~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~-~~~~~~- 335 (397)
T PRK06939 263 WLRQRSRPYLFSNSLAPAIVAASIKVLEL---L-EESDELRDRLWENARYFREGMTAA-GFTLGPGEHPIIP-VMLGDA- 335 (397)
T ss_pred HHHHhCccccccCCCCHHHHHHHHHHHHH---H-hcCHHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCEEE-EEECCH-
Confidence 887653322 222233345555566653 1 223577889999999999999987 7777667777754 334421
Q ss_pred CCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 401 GSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.++.+|+++|+++ ||.+
T Consensus 336 ----------~~~~~~~~~L~~~-gI~v 352 (397)
T PRK06939 336 ----------KLAQEFADRLLEE-GVYV 352 (397)
T ss_pred ----------HHHHHHHHHHHHC-CceE
Confidence 1577899999988 8876
No 111
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6e-31 Score=236.64 Aligned_cols=326 Identities=19% Similarity=0.318 Sum_probs=240.5
Q ss_pred HHHH-HHHHHHhcCCCeEEcCCCCCCCCC--hHHHHHHHHHHHHcC-----CCCCCCCCCCHHHHHHHHHHHHhhcCCCC
Q 014172 82 AITD-QATALAQAGVSVIRLAAGEPDFDT--PVLIAEAGINAIREG-----FTRYTPNAGTLELRSAICHKLKEENGLSY 153 (429)
Q Consensus 82 ~~~~-~~~~~~~~g~~~i~L~~g~~~~~~--p~~v~~a~~~~~~~~-----~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~ 153 (429)
.+++ ....++..| .|+|+.|+|..-+ ..-+.+...+.+.++ ..+|+.++|...|.+++++.+++++|+.+
T Consensus 18 ~lMdDl~d~Lrt~g--~imLggGNPa~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwni 95 (417)
T COG3977 18 QLMDDLNDGLRTPG--AIMLGGGNPARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNI 95 (417)
T ss_pred HHHHHHHhhccCCC--ceeeCCCCcccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCC
Confidence 3443 344454444 9999999987432 122344444444443 46899999999999999999999999999
Q ss_pred CCCcEEEecChHHHHHHHHHHhcC---CC--CEEEEc-CCCCCChHHHHHHcCCEEEE---ecCCCCCC--CCCCHHHHH
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCS---PG--DEVIIP-APFWVSYPEMARIADATPVI---LPTRISEN--FLLDPKVLE 222 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~---~g--d~Vlv~-~p~y~~~~~~~~~~g~~~~~---v~~~~~~~--~~~d~e~l~ 222 (429)
+++||.+|+|++.+.+.++..+.. .| ..|++| .|.|.+|.++...-..=|-. +...+++. +.+|.+.+.
T Consensus 96 t~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~ 175 (417)
T COG3977 96 TAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLH 175 (417)
T ss_pred ccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccCCcccccccceeeccCHHHcc
Confidence 999999999999999998888753 24 346655 68898887654322211111 11122232 456777664
Q ss_pred hhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCC-CCceEEEeccC
Q 014172 223 SKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM-WERTLTVNGFS 301 (429)
Q Consensus 223 ~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~S 301 (429)
+.+++.+|+++-|.||||.+++.+|+.+|.++|+.| |+.+|+|.+|+.- |.+- -+.+.... .++++.|.|+|
T Consensus 176 --i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~-giPliIDnAYg~P-FP~i---ifsd~~~~w~~NiilC~SLS 248 (417)
T COG3977 176 --IGESTGAICVSRPTNPTGNVLTDEELAKLDALARQH-GIPLIIDNAYGVP-FPGI---IFSDATPLWNENIILCMSLS 248 (417)
T ss_pred --cccccceEEecCCCCCCCCcccHHHHHHHHHHhhhc-CCcEEEecccCCC-CCce---ecccccccCCCCEEEEeehh
Confidence 457889999999999999999999999999999999 9999999999841 1111 11111111 48899999999
Q ss_pred hhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc-CC-
Q 014172 302 KAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LE- 379 (429)
Q Consensus 302 K~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-l~- 379 (429)
| +|+||.|+|.++++++++..+..+....+..++.++++.+..+++.+...+-.-+-++.-|+.+.+...+.|+. +|
T Consensus 249 K-~GLPG~R~GIiIane~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~ 327 (417)
T COG3977 249 K-LGLPGSRCGIIIANEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPE 327 (417)
T ss_pred h-cCCCCcceeEEEccHHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCc
Confidence 9 58999999999999999999999988888899999999999999875432211223455677777777777765 44
Q ss_pred -CceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 380 -GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 380 -g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+.+.+|+|++|+|+-+.+.. .+.+++.++|.++ ||.+
T Consensus 328 ~~~~iHkpEGAIFlWLWf~dLP----------Itt~~LYq~LKa~-Gvl~ 366 (417)
T COG3977 328 YRCLIHKPEGAIFLWLWFKDLP----------ITTEELYQRLKAR-GVLM 366 (417)
T ss_pred cceeeecCCcceeehhhhccCC----------CCHHHHHHHHHhC-eEEE
Confidence 366789999999999887651 4789999998776 8764
No 112
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=100.00 E-value=7.8e-31 Score=261.59 Aligned_cols=296 Identities=18% Similarity=0.205 Sum_probs=224.8
Q ss_pred cCCCeEEcCCCC-CCCCChHHHHHHHHHHHHcCCCCCCCCC---CC----HHHHHHHHHHHHhhcCCCCCCCcEEEecCh
Q 014172 93 AGVSVIRLAAGE-PDFDTPVLIAEAGINAIREGFTRYTPNA---GT----LELRSAICHKLKEENGLSYTPDQILVSNGA 164 (429)
Q Consensus 93 ~g~~~i~L~~g~-~~~~~p~~v~~a~~~~~~~~~~~Y~~~~---G~----~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~ 164 (429)
.|+++|+|+.|+ +++++++++.+++.+++.+....|+++. |. .+|++++|++++ .+++++++|+
T Consensus 36 ~g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g--------~~~~ii~~~~ 107 (393)
T TIGR01822 36 DGREVLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFLG--------TEDTILYASC 107 (393)
T ss_pred CCceEEEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhC--------CCcEEEECch
Confidence 567899999999 5888899999999999876334676666 76 677788887763 2567888899
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------CCcEEEEcCCC
Q 014172 165 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPS 238 (429)
Q Consensus 165 ~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~~~~i~l~~p~ 238 (429)
++++..++.+++++||.|++++|.|+++...++..+.+.+.++ . +|++++++.+++ ++++|++.+++
T Consensus 108 ~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~----~---~d~~~l~~~i~~~~~~~~~~~~v~~~~v~ 180 (393)
T TIGR01822 108 FDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA----N---NDMADLEAQLKEARAAGARHRLIATDGVF 180 (393)
T ss_pred HHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC----C---CCHHHHHHHHHhhhhcCCCceEEEEeCCc
Confidence 9999999999999999999999999999999999888876554 1 589999988864 67888889999
Q ss_pred CCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCC-CCCceEEEeccChhcccccceeeEEEcC
Q 014172 239 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG-MWERTLTVNGFSKAFAMTGWRLGYIAGP 317 (429)
Q Consensus 239 NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~~~G~R~G~v~~~ 317 (429)
||||.+.+ +++|+++|++| |+++|+||+|....++... .......+ ..+.+++++||||.+ +|+|+||++++
T Consensus 181 ~~tG~~~~---l~~i~~la~~~-~~~li~De~~~~g~~~~~~-~~~~~~~~~~~~~di~~~s~sK~l--~g~r~G~~~~~ 253 (393)
T TIGR01822 181 SMDGVIAP---LDEICDLADKY-DALVMVDECHATGFLGPTG-RGSHELCGVMGRVDIITGTLGKAL--GGASGGFTTAR 253 (393)
T ss_pred cCCCCcCC---HHHHHHHHHHc-CCEEEEECCccccCcCCCC-CchHHhcCCCCCCeEEEEEChHHh--hCCCcEEEEeC
Confidence 99999998 89999999999 9999999999643332211 11111111 124679999999987 47899999999
Q ss_pred HHHHHHHHHHhhcc-cC-CCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEe
Q 014172 318 KHFVAACNKIQSQF-TS-GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFID 395 (429)
Q Consensus 318 ~~~~~~l~~~~~~~-~~-~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~ 395 (429)
+++++.+......+ .. +.+...+.++.++++. .+..++++++++++++++.+.|+++ |+++..+.+++ +.+.
T Consensus 254 ~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-~~i~ 327 (393)
T TIGR01822 254 KEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEM----LEASNELRDRLWANTRYFRERMEAA-GFDIKPADHPI-IPVM 327 (393)
T ss_pred HHHHHHHHHhCccceecCCCCHHHHHHHHHHHHH----HhcCHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCE-EEEE
Confidence 99999887643322 22 2344445556666654 2335677889999999999999887 88776555554 4455
Q ss_pred cCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 396 FSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 396 l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+++. .+..+|+++|+++ ||.+
T Consensus 328 ~~~~-----------~~~~~l~~~L~~~-gI~v 348 (393)
T TIGR01822 328 LYDA-----------VLAQRFARRLLEE-GIYV 348 (393)
T ss_pred eCCH-----------HHHHHHHHHHHHC-CeeE
Confidence 4431 1467899999877 8876
No 113
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=5.2e-31 Score=267.43 Aligned_cols=314 Identities=20% Similarity=0.266 Sum_probs=236.4
Q ss_pred cCCCeEEcCCCC-CCCCChHHHHHHHHHHHHcCCC-------CCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecCh
Q 014172 93 AGVSVIRLAAGE-PDFDTPVLIAEAGINAIREGFT-------RYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGA 164 (429)
Q Consensus 93 ~g~~~i~L~~g~-~~~~~p~~v~~a~~~~~~~~~~-------~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~ 164 (429)
.|+++|||+.|+ +++..++++.+++.+++++.-. .|++..+..+|+++|++++. .++.|++++|+
T Consensus 107 ~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~-------~~~~i~~s~G~ 179 (481)
T PLN02822 107 NGKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLG-------TPDSILYSYGL 179 (481)
T ss_pred CCceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhC-------CCCEEEECCHH
Confidence 577899999886 6888899999999999976212 35555567788888888874 46789999888
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhc--ccCC-cEEEEcCCCCCc
Q 014172 165 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL--TEKS-RLLILCSPSNPT 241 (429)
Q Consensus 165 ~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l--~~~~-~~i~l~~p~NPt 241 (429)
+ ++..++.+++++||.|++....|..+...+.+.|.+++.++.++.+++..+++++++.. .+++ ++|++++++|++
T Consensus 180 ~-a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~ 258 (481)
T PLN02822 180 S-TIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNS 258 (481)
T ss_pred H-HHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCC
Confidence 7 56779999999999999998888888888999999999998754333333344443322 1344 688889999999
Q ss_pred cCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCC--ccccCCCCCCceEEEeccChhcccccceeeEEEcCHH
Q 014172 242 GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT--SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH 319 (429)
Q Consensus 242 G~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~--~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~ 319 (429)
|.+++ +++|.++|++| |+++|+||+|+.++++..+.. ....+.. .+.+|+++||||.+|++| ||++++++
T Consensus 259 G~i~~---L~~i~~l~~k~-~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~-~~~dii~~s~sKalg~~G---G~i~g~~~ 330 (481)
T PLN02822 259 GQIAP---LDEIVRLKEKY-RFRVLLDESNSFGVLGKSGRGLSEHFGVPI-EKIDIITAAMGHALATEG---GFCTGSAR 330 (481)
T ss_pred CCccC---HHHHHHHHHHc-CCEEEEECCccccccCCCCCChHHHcCCCC-CCCeEEEecchhhhhhCC---eEEEcCHH
Confidence 99999 89999999999 999999999998777632221 1111111 356799999999999899 99999999
Q ss_pred HHHHHHHHhhcccCCC--chHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecC
Q 014172 320 FVAACNKIQSQFTSGA--SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFS 397 (429)
Q Consensus 320 ~~~~l~~~~~~~~~~~--~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~ 397 (429)
+++.++.....+.++. ++..+.++.++|+. .++ ..+++++++++++++.+.|++++|+.+..+.+++|+++.++
T Consensus 331 ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~---l~~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l~l~ 406 (481)
T PLN02822 331 VVDHQRLSSSGYVFSASLPPYLASAAITAIDV---LED-NPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFLHLE 406 (481)
T ss_pred HHHHHHhcCCceeeccccCHHHHHHHHHHHHH---HHh-CHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEEEeC
Confidence 9998876555445544 46677888888875 222 35788999999999999999977888887888999999996
Q ss_pred CccCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 398 TYYGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
+..+.. ++ ......+++++|++++||.+.
T Consensus 407 ~~~~~~-~~--~~~~~~~~~~~Ll~e~GV~v~ 435 (481)
T PLN02822 407 KSTGSA-KE--DLSLLEHIADRMLKEDSVLVV 435 (481)
T ss_pred CCcccc-cc--hHHHHHHHHHHHHhcCCEEEE
Confidence 421100 00 000136899999977799863
No 114
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=100.00 E-value=2.1e-30 Score=255.14 Aligned_cols=300 Identities=16% Similarity=0.178 Sum_probs=219.5
Q ss_pred hcCCCeEEcCCCCC-CCCChHHHHHHHHHHHHcCCCC---CCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHH
Q 014172 92 QAGVSVIRLAAGEP-DFDTPVLIAEAGINAIREGFTR---YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (429)
Q Consensus 92 ~~g~~~i~L~~g~~-~~~~p~~v~~a~~~~~~~~~~~---Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~a 167 (429)
..|+++|+|+.|+| +++.|+++.+++.++++..... |....|..+++..+.+.+.+.+| .+++|++++|+.+.
T Consensus 13 ~~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~---~~~~i~~~~G~~~~ 89 (360)
T TIGR00858 13 RDGRRLLNFSSNDYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKG---TEAALLFSSGYLAN 89 (360)
T ss_pred ECCceEEecccCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC---CCCEEEECchHHHH
Confidence 46788999999964 3445789999999988652122 22223444433334344433344 35678888886555
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc----CCcEEEEcCCCCCccC
Q 014172 168 ILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE----KSRLLILCSPSNPTGS 243 (429)
Q Consensus 168 l~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~----~~~~i~l~~p~NPtG~ 243 (429)
+ .++.+++++||+|++++|+|..+...++..|++++.++. +|++.+++.++. +++++++++++||||.
T Consensus 90 ~-~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~ 161 (360)
T TIGR00858 90 V-GVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNRGERRKLIVTDGVFSMDGD 161 (360)
T ss_pred H-HHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcccCCCeEEEEeCCccCCCC
Confidence 4 577888999999999999999999999999999988763 488899888864 4678888999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCC--CccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHH
Q 014172 244 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH--TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFV 321 (429)
Q Consensus 244 ~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~--~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~ 321 (429)
..+ +++|.++|++| +++||+||+|..+.++.... .....+.. .+++|+++||||.|+++| ||++++++++
T Consensus 162 ~~~---~~~i~~l~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~g---G~~~~~~~~~ 233 (360)
T TIGR00858 162 IAP---LPQLVALAERY-GAWLMVDDAHGTGVLGEDGRGTLEHFGLKP-EPVDIQVGTLSKALGSYG---AYVAGSQALI 233 (360)
T ss_pred CcC---HHHHHHHHHHc-CcEEEEECcccccCcCCCCCchHHhcCCCc-cCCcEEEEechhhhhccC---cEEEcCHHHH
Confidence 998 89999999999 99999999998766543211 11222221 467899999999999767 9999999998
Q ss_pred HHHHHHhhcc--cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCc
Q 014172 322 AACNKIQSQF--TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTY 399 (429)
Q Consensus 322 ~~l~~~~~~~--~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~ 399 (429)
+.+......+ ..+.+...+.++.++++. .+..+.++++++++++++.+.|+++ ++++. +.+++++|+.++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~----~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~~ 307 (360)
T TIGR00858 234 DYLINRARTLIFSTALPPAVAAAALAALEL----IQEEPWRREKLLALIARLRAGLEAL-GFTLM-PSCTPIVPVIIGDN 307 (360)
T ss_pred HHHHHhCccceecCCCCHHHHHHHHHHHHH----HhhCHHHHHHHHHHHHHHHHHHHHc-CCccC-CCCCCEEEEEeCCH
Confidence 8886554332 223445555566677764 2234567889999999999999987 77766 44566788888642
Q ss_pred cCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 400 YGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.++.+++++|+++ ||.+
T Consensus 308 -----------~~~~~~~~~l~~~-gI~v 324 (360)
T TIGR00858 308 -----------ASALALAEELQQQ-GIFV 324 (360)
T ss_pred -----------HHHHHHHHHHHHC-CeeE
Confidence 1467899998765 8876
No 115
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=100.00 E-value=5e-30 Score=249.97 Aligned_cols=274 Identities=20% Similarity=0.248 Sum_probs=214.4
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEc
Q 014172 106 DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIP 185 (429)
Q Consensus 106 ~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~ 185 (429)
.+..+|.+.++..++++. |+ |..++.+++.+.+.+++| ++++++++++|+++++..++.+++++||.|+++
T Consensus 31 gl~~~~~~~~~~~~~~~~----~~---g~~~~~~~Le~~lA~~~g--~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~ 101 (346)
T TIGR03576 31 GLAGGFKIDEEDLELLET----YV---GPAIFEEKVQELGREHLG--GPEEKILVFNRTSSAILATILALEPPGRKVVHY 101 (346)
T ss_pred cCCCChhHHHHHHHHHHH----hc---CCHHHHHHHHHHHHHHcC--CCcceEEEECCHHHHHHHHHHHhCCCCCEEEEC
Confidence 344578888888888754 32 566788888888877778 467899999999999999999999999999974
Q ss_pred ---CCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCC
Q 014172 186 ---APFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR 262 (429)
Q Consensus 186 ---~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~ 262 (429)
.|+|.+|...++..|++++.+ .+++.++. .+++++|+++ ++||+|.+++.+++++|+++|++| |
T Consensus 102 ~~d~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~--~~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~-~ 168 (346)
T TIGR03576 102 LPEKPAHPSIPRSCKLAGAEYFES---------DELSELKK--IDGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSK-E 168 (346)
T ss_pred CCCCCCchhHHHHHHHcCCEEecc---------CCHHHHhh--CcCceEEEEE-CCCCCCcccCHHHHHHHHHHHHHc-C
Confidence 579999999999999986432 14555433 2467887774 579999999999999999999999 9
Q ss_pred eEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHH
Q 014172 263 LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKA 342 (429)
Q Consensus 263 i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~a 342 (429)
++||+||+|..++.+.....+...+ +..+++.|||| +++|+|+||+++++++++.+.+....+.++.+++.|.+
T Consensus 169 ~~livDEAy~~~~~~~~~~~~~~~~----~~divv~s~SK--alaG~r~G~v~~~~~li~~l~~~~~~~~~s~~~~~~~a 242 (346)
T TIGR03576 169 AIVLVDDASGARVRRLYGQPPALDL----GADLVVTSTDK--LMDGPRGGLLAGRKELVDKIKSVGEQFGLEAQAPLLAA 242 (346)
T ss_pred CEEEEECCccccccccCCCCCHHHc----CCcEEEeccch--hccccceEEEEeCHHHHHHHHHhhcCcccCccHHHHHH
Confidence 9999999999865431111122222 23477889999 56899999999999999999998888777788889999
Q ss_pred HHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHH
Q 014172 343 GVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLD 422 (429)
Q Consensus 343 a~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~ 422 (429)
+.++|+. .. .+..++.++++++++.+.++++ .+.++.++ |+|++++.. ++.+++.++++
T Consensus 243 a~~aL~~---~~--~~~~~~~l~~r~~~~~~~l~~~---~~~~~~~~-f~~~~~~~~------------~~~~~~~~ll~ 301 (346)
T TIGR03576 243 VVRALEE---FE--LSRIRDAFKRKEEVYLRLFDKL---NVERTPTG-FVIKGVEEE------------KLIEIGLDLLR 301 (346)
T ss_pred HHHHHhh---cc--HHHHHHHHHHHHHHHHHHHHhC---CCCcCCCe-EEEEeCCCC------------CHHHHHHHHHH
Confidence 9999975 22 3567888999999888888754 44444455 799999742 46688999999
Q ss_pred hCCeec
Q 014172 423 KAQVLL 428 (429)
Q Consensus 423 ~~gV~v 428 (429)
++||+|
T Consensus 302 ~~gV~v 307 (346)
T TIGR03576 302 NYGIIT 307 (346)
T ss_pred hCCEEE
Confidence 999986
No 116
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.98 E-value=3.2e-30 Score=256.47 Aligned_cols=300 Identities=20% Similarity=0.244 Sum_probs=230.0
Q ss_pred cCCCeEEcCCCC-CCCCChHHHHHHHHHHHHcC---CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 93 AGVSVIRLAAGE-PDFDTPVLIAEAGINAIREG---FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 93 ~g~~~i~L~~g~-~~~~~p~~v~~a~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
.|+++|+|+.|+ +++++++.+.+++.+++.+. ...|....|..++++++++++.+.+| .++.+++++|+ +++
T Consensus 31 ~g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g---~~~~i~~~sG~-~a~ 106 (385)
T TIGR01825 31 NGKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKK---TEAALVFQSGF-NTN 106 (385)
T ss_pred CCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhC---CCcEEEECcHH-HHH
Confidence 577899999997 78888899999999988642 23576778999999999999998888 34678888885 556
Q ss_pred HHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc----CCcEEEEcCCCCCccCC
Q 014172 169 LQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE----KSRLLILCSPSNPTGSV 244 (429)
Q Consensus 169 ~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~----~~~~i~l~~p~NPtG~~ 244 (429)
..++.+++++||.|+++.|+|..+...+...|++++.++ .+|++++++.+.+ ++++|++++++||||.+
T Consensus 107 ~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~ 179 (385)
T TIGR01825 107 QGVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDV 179 (385)
T ss_pred HHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCc
Confidence 678888999999999999999999888888898887764 2688888876653 67888888899999999
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHH
Q 014172 245 YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC 324 (429)
Q Consensus 245 ~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l 324 (429)
.+ +++|.++|++| |+++|+||+|..+.++.........+.-..++++++.||||.++++| ||+++++++++.+
T Consensus 180 ~~---~~~i~~l~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~~~~~~~~~~ 252 (385)
T TIGR01825 180 AP---LPEIVELAERY-GAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVVG---GYAAGHKELIEYL 252 (385)
T ss_pred cC---HHHHHHHHHHh-CCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcCC---CEEecCHHHHHHH
Confidence 99 89999999999 99999999998776542211111112212577899999999998766 9999999999988
Q ss_pred HHHhhcc--cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCC
Q 014172 325 NKIQSQF--TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGS 402 (429)
Q Consensus 325 ~~~~~~~--~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~ 402 (429)
......+ +...+...+.++.++++. ..++ .+..++++++++++.+.|+++ |+++..|++++ +++.++..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~-~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-~~~~~~~~--- 323 (385)
T TIGR01825 253 KNRARPFLFSTAQPPAVVAALAAAVDE---LQRS-PELMERLWDNTRFFKAGLGKL-GYDTGGSETPI-TPVVIGDE--- 323 (385)
T ss_pred HHhCccccccCCCCHHHHHHHHHHHHH---HhcC-HHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCE-EEEEECCH---
Confidence 7654322 222455667777777764 1222 245677788999999999987 88887777765 44444421
Q ss_pred cccCCCCCCChHHHHHHHHHhCCeec
Q 014172 403 EAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 403 ~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+..+|+++|+++ ||.+
T Consensus 324 --------~~~~~~~~~L~~~-gi~v 340 (385)
T TIGR01825 324 --------KAAQEFSRRLFDE-GIFA 340 (385)
T ss_pred --------HHHHHHHHHHHHC-CcEE
Confidence 1467899999988 8875
No 117
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.98 E-value=1e-30 Score=244.40 Aligned_cols=336 Identities=17% Similarity=0.201 Sum_probs=255.3
Q ss_pred ccccccCCchhHHHHHHHHHHHhcC-CCeEEcCCCC--CCCCC---hHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHH
Q 014172 70 PRVNAVKPSKTVAITDQATALAQAG-VSVIRLAAGE--PDFDT---PVLIAEAGINAIREG-FTRYTPNAGTLELRSAIC 142 (429)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~g-~~~i~L~~g~--~~~~~---p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia 142 (429)
+.+...++.++..+.+..+ +.+ ++.|||++|. ..-+. -+.|.+|....+.+. ...|.|..|.++++++++
T Consensus 3 ~~i~~~p~DpIlgL~e~f~---~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~ 79 (396)
T COG1448 3 EKIEAAPADPILGLKEAFK---ADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQ 79 (396)
T ss_pred cccccCCCCchhHHHHHHh---cCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHH
Confidence 3444455555555544443 333 3689999997 33222 255666666655443 467999999999999999
Q ss_pred HHHHhhcCCC---CCCCcE--EEecChHHHHHHHHHHhc--CCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCC
Q 014172 143 HKLKEENGLS---YTPDQI--LVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFL 215 (429)
Q Consensus 143 ~~l~~~~g~~---~~~~~i--~~t~G~~~al~~~l~~l~--~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~ 215 (429)
+.+ +|.+ +..++| +.|.|+|.||..+...+. .+..+|++++|+|+++..++...|.++..+|+....+..
T Consensus 80 ~ll---FG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~ 156 (396)
T COG1448 80 KLL---FGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKG 156 (396)
T ss_pred HHh---cCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeecccccccc
Confidence 998 5644 344444 788999999998877664 466789999999999999999999999999988777777
Q ss_pred CCHHHHHhhccc--CCcEEEE-cCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCC-CCCccccCCCCC
Q 014172 216 LDPKVLESKLTE--KSRLLIL-CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA-THTSFASLPGMW 291 (429)
Q Consensus 216 ~d~e~l~~~l~~--~~~~i~l-~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~-~~~~~~~~~~~~ 291 (429)
+|.+.+.+.+.. ...+|++ ...|||||..++.++|++|+++.+++ +++.+.|-+|.+|.-+.. ....++-+....
T Consensus 157 ~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r-~lip~~D~AYQGF~~GleeDa~~lR~~a~~~ 235 (396)
T COG1448 157 LDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKER-GLIPFFDIAYQGFADGLEEDAYALRLFAEVG 235 (396)
T ss_pred ccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc-CCeeeeehhhhhhccchHHHHHHHHHHHHhC
Confidence 999999888864 3445555 55599999999999999999999999 999999999999754421 122233333333
Q ss_pred CceEEEeccChhcccccceeeEEEc---CHH----HHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHH---HHHHH
Q 014172 292 ERTLTVNGFSKAFAMTGWRLGYIAG---PKH----FVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEV---VSKMV 361 (429)
Q Consensus 292 ~~~i~~~S~SK~~~~~G~R~G~v~~---~~~----~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~---~~~~~ 361 (429)
..++++.||||.||+.|.|+|.+.. +.+ +...+....+...++|+..+...+...|++..+..+| +..++
T Consensus 236 ~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr 315 (396)
T COG1448 236 PELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMR 315 (396)
T ss_pred CcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 4489999999999999999999653 333 4445666677788899999999999999875443344 66789
Q ss_pred HHHHHHHHHHHHHhccC-C--CceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 362 KAFRERRDFLVKSFGEL-E--GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 362 ~~~~~~r~~l~~~L~~l-~--g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+++.+.|..+++.|++. + .+.+...+.|||.+..+ +.+-+.+|.+++||++
T Consensus 316 ~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gl----------------s~~QV~rLree~~IY~ 369 (396)
T COG1448 316 QRILEMRQALVDALKALGAPRNFDFIISQRGMFSYTGL----------------SPEQVDRLREEFGIYL 369 (396)
T ss_pred HHHHHHHHHHHHHHHhhCCCcccchHhhcCceeecCCC----------------CHHHHHHHHHhccEEE
Confidence 99999999999999984 2 37788899999988744 4477788999999975
No 118
>PRK10534 L-threonine aldolase; Provisional
Probab=99.97 E-value=2.1e-30 Score=252.74 Aligned_cols=289 Identities=18% Similarity=0.240 Sum_probs=209.2
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhc
Q 014172 97 VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC 176 (429)
Q Consensus 97 ~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~ 176 (429)
+|+|++++++. +++.+.+++.+.. .+...|+|..+..+|+++|+++++ -+.+++++|+++++..++.+++
T Consensus 1 ~~~~~~~~~~~-p~~~~~~a~~~~~-~~~~~Y~~~~~~~~L~~~la~~~g--------~~~~~v~~~g~~a~~~~l~~~~ 70 (333)
T PRK10534 1 MIDLRSDTVTR-PSRAMLEAMMAAP-VGDDVYGDDPTVNALQDYAAELSG--------KEAALFLPTGTQANLVALLSHC 70 (333)
T ss_pred CcccccccCCC-CCHHHHHHHHhcc-CCCcccCCCHHHHHHHHHHHHHhC--------CCeEEEeCchHHHHHHHHHHhc
Confidence 48899999888 7788999887754 345679888889999999999963 2345688888888888888889
Q ss_pred CCCCEEEEcCCCCCC-hHHH-HHHcC-CEEEEecCCCCCCCCCCHHHHHhhccc------CCcEEEEcCCCCCccCCCCH
Q 014172 177 SPGDEVIIPAPFWVS-YPEM-ARIAD-ATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPK 247 (429)
Q Consensus 177 ~~gd~Vlv~~p~y~~-~~~~-~~~~g-~~~~~v~~~~~~~~~~d~e~l~~~l~~------~~~~i~l~~p~NPtG~~~~~ 247 (429)
++||+|+++.|+|.. |... +...| ++++.++++ .+|.+|+++|++++++ ++++|++|+|+ ||.+++.
T Consensus 71 ~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~ 146 (333)
T PRK10534 71 ERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAA--ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPR 146 (333)
T ss_pred CCCCeeEEechhhhhHhcCCchHHhcCceEEeecCC--CCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCH
Confidence 999999999888753 4321 33444 688888764 3578999999999876 68899999766 5999999
Q ss_pred HHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceee-EEEcCHHHHHHHHH
Q 014172 248 NLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLG-YIAGPKHFVAACNK 326 (429)
Q Consensus 248 ~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G-~v~~~~~~~~~l~~ 326 (429)
+++++|+++|++| +++|++||+|.+...... ..+...+....+++ +.||||.|+++ +| |+++++++++.+.+
T Consensus 147 ~~l~~i~~~~~~~-~~~lvvDEA~~~~~~~~~-~~~~~~~~~~~~~~--~~s~SK~~~~~---~G~~~~~~~~~i~~~~~ 219 (333)
T PRK10534 147 EYLKQAWEFTRER-NLALHVDGARIFNAVVAY-GCELKEITQYCDSF--TICLSKGLGTP---VGSLLVGNRDYIKRARR 219 (333)
T ss_pred HHHHHHHHHHHHc-CCeEEeeHHHHHHHHHHc-CCCHHHHHhcCCEE--EEEeEcCCCCc---ccceEEcCHHHHHHHHH
Confidence 9999999999999 999999999873211100 11222221111323 34899998864 67 68899999999988
Q ss_pred HhhcccCCC--chHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcc
Q 014172 327 IQSQFTSGA--SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEA 404 (429)
Q Consensus 327 ~~~~~~~~~--~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~ 404 (429)
+...+..+. +.+.|.++..+|+. .. +..++..++|+++.+.|+++ |+++.+| +++|+|++++..
T Consensus 220 ~~~~~~~~~~~~~~~~a~~~~~l~~------~~-~~~~~~~~~r~~l~~~L~~~-g~~~~~~-~~nfv~~~~~~~----- 285 (333)
T PRK10534 220 WRKMTGGGMRQAGILAAAGLYALKH------NV-ARLQEDHDNAAWLAEQLREA-GADVMRQ-DTNMLFVRVGEE----- 285 (333)
T ss_pred HHHHhCCchhhHHHHHHHHHHHHHh------hH-HHHHHHHHHHHHHHHHHHhC-CCccCCC-CceEEEEECCch-----
Confidence 776554333 34556666666642 12 23333445678999999998 8888777 577899999632
Q ss_pred cCCCCCCChHHHHHHHHHhCCeec
Q 014172 405 EGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 405 ~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+..++.+.| .+.||.|
T Consensus 286 -------~~~~~~~~l-~~~gi~v 301 (333)
T PRK10534 286 -------QAAALGEYM-RERNVLI 301 (333)
T ss_pred -------hHHHHHHHH-HHcCeee
Confidence 466776555 5559986
No 119
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=1.5e-30 Score=229.88 Aligned_cols=299 Identities=24% Similarity=0.325 Sum_probs=237.8
Q ss_pred cCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHH
Q 014172 93 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 172 (429)
Q Consensus 93 ~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l 172 (429)
-|++++.|+.++.+..++|+-.+ --..| +.....+++.+++.- -++.+++|+++.|+.+.|.+++
T Consensus 39 ~G~~iv~ld~~e~~ryPdP~q~e--------fk~~~-~d~rnk~ls~a~~~d------kpLt~dnic~GvGsDE~ID~ii 103 (375)
T KOG0633|consen 39 LGRDIVKLDANENPRYPDPEQME--------FKYVY-PDPRNKRLSDALAQD------KPLTSDNICVGVGSDELIDLII 103 (375)
T ss_pred cCCCceEeccccCCCCcCHHHcc--------ccccc-CCcccchhhhhcccC------CCCCccceEEecCcHHHHHHHH
Confidence 47789999999966555443311 12345 344556777776643 2478999999999999999999
Q ss_pred HHhcCCC-CEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc--cCCcEEEEcCCCCCccCCCCHHH
Q 014172 173 LAVCSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT--EKSRLLILCSPSNPTGSVYPKNL 249 (429)
Q Consensus 173 ~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~--~~~~~i~l~~p~NPtG~~~~~~~ 249 (429)
++.|.|| ++|+...|+|..|.-.+...+++++.+|+++ +|.++.|.+.+.+. .++|.+++++|+||||..+..++
T Consensus 104 R~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~p--dF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~d 181 (375)
T KOG0633|consen 104 RCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNP--DFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDD 181 (375)
T ss_pred hheecCCccceeecCCcceeEEEEeecCCceEEEecCCC--CccccHHHHHHHHhccccceEEEEcCCCCCCcccccHHH
Confidence 9999999 8999999999999999999999999999976 68899999999885 47899999999999999999888
Q ss_pred HHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhh
Q 014172 250 LDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS 329 (429)
Q Consensus 250 l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~ 329 (429)
+..|.+.-. |.+|++||+|.+|.-.+ +-..+...+++.+++.+|||.||++|+|+||...+..+++.+.+.+.
T Consensus 182 i~KiLe~p~---nglVVvDEAYidFsg~~----S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~~Ka 254 (375)
T KOG0633|consen 182 ILKILEMPD---NGLVVVDEAYIDFSGVE----SRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNRAKA 254 (375)
T ss_pred HHHHHhCCC---CcEEEEeeeeEeecccc----ccchHhHhCCceeehhhhhhhcCcceeEeecccccHHHHHHHHhccC
Confidence 888776532 67888899999975322 33445556899999999999999999999999999999999999888
Q ss_pred cccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCce-eecCCceEEEEEecCCccCCcccCCC
Q 014172 330 QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFSTYYGSEAEGFG 408 (429)
Q Consensus 330 ~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~-~~~p~~~~~~~~~l~~~~~~~~~~~~ 408 (429)
+++ .|..+..++++++... ....++..++.+-+.|.++...|.+++++. +..+.-+.|+.+++.+.-.
T Consensus 255 PYN--iS~~~s~~AL~Als~~--n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~n------- 323 (375)
T KOG0633|consen 255 PYN--ISVAGSVAALAALSDS--NGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGGDN------- 323 (375)
T ss_pred Ccc--ccchhHHHHHHhcCcc--cchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCCCc-------
Confidence 775 6788888899999853 246688889999999999999999988765 3345556678899875300
Q ss_pred CCCChHHHHHHHHHhCCeec
Q 014172 409 KIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 409 ~~~~~~~~~~~Ll~~~gV~v 428 (429)
.-+..+..++..+.||.|
T Consensus 324 --~~akkly~q~at~~gVvV 341 (375)
T KOG0633|consen 324 --GMAKKLYKQDATKMGVVV 341 (375)
T ss_pred --HHHHHHHHHHHHhcceEE
Confidence 124455566666778875
No 120
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.97 E-value=1.5e-28 Score=244.40 Aligned_cols=299 Identities=19% Similarity=0.191 Sum_probs=218.4
Q ss_pred cCCCeEEcCCCCC-CCCChHHHHHHHHHHHHcC---CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 93 AGVSVIRLAAGEP-DFDTPVLIAEAGINAIREG---FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 93 ~g~~~i~L~~g~~-~~~~p~~v~~a~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
.|+++|+|+.|++ ++.+|+.+.+++.+.+... ...|....|...+++.+++.+.+.+| .++.|+++ ++++++
T Consensus 37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~---~~~~i~~~-~g~~~~ 112 (385)
T PRK05958 37 DGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG---AERALLFS-SGYAAN 112 (385)
T ss_pred CCceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC---CCcEEEEC-cHHHHH
Confidence 6788999999975 4556789999999988651 11233334556666666666666666 34455555 455666
Q ss_pred HHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc---CCcEEEEcCCCCCccCCC
Q 014172 169 LQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVY 245 (429)
Q Consensus 169 ~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~---~~~~i~l~~p~NPtG~~~ 245 (429)
..++..++++||.|++++|+|+.+...++..|++++.++. .|++.+++.+++ ++.++++.+++||||...
T Consensus 113 ~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~ 185 (385)
T PRK05958 113 LAVLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKWRAGRALIVTESVFSMDGDLA 185 (385)
T ss_pred HHHHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhccCCCeEEEEEecccCCCCcC
Confidence 6677888999999999999999999999999999988874 378899988865 245555677899999998
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCC--CCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHH
Q 014172 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA--THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA 323 (429)
Q Consensus 246 ~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~ 323 (429)
+ +++|.++|++| |+++|+||+|..+.++.. .......+. ..+++|++.||||.++++| ||+++++++++.
T Consensus 186 ~---l~~i~~ia~~~-~~~li~De~~~~g~~~~~g~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G---g~~~~~~~~~~~ 257 (385)
T PRK05958 186 P---LAELVALARRH-GAWLLVDEAHGTGVLGPQGRGLAAEAGLA-GEPDVILVGTLGKALGSSG---AAVLGSETLIDY 257 (385)
T ss_pred C---HHHHHHHHHHh-CCEEEEECcccccccCCCCCchHHhhCCC-CCCceEEEEechhhcccCC---cEEEcCHHHHHH
Confidence 8 89999999999 999999999986655422 111111232 2467899999999999777 999999998888
Q ss_pred HHHHhhcc--cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccC
Q 014172 324 CNKIQSQF--TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG 401 (429)
Q Consensus 324 l~~~~~~~--~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~ 401 (429)
+.+....+ ..+.+...+.++.++++. .++. ..+.+++.++++++.+.|+++ |+++.++.++| +|+.++..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~aa~~aal~~---~~~~-~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~-~~~~~~~~-- 329 (385)
T PRK05958 258 LINRARPFIFTTALPPAQAAAARAALRI---LRRE-PERRERLAALIARLRAGLRAL-GFQLMDSQSAI-QPLIVGDN-- 329 (385)
T ss_pred HHHhCccceecCCCCHHHHHHHHHHHHH---HhcC-HHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCE-EEEEeCCH--
Confidence 76543222 223445555556677764 1222 567788999999999999987 78777676665 67777642
Q ss_pred CcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 402 SEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.++.+++++|.++ ||.|
T Consensus 330 ---------~~~~~~~~~l~~~-gI~v 346 (385)
T PRK05958 330 ---------ERALALAAALQEQ-GFWV 346 (385)
T ss_pred ---------HHHHHHHHHHHHC-CceE
Confidence 2567899999765 8876
No 121
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.96 E-value=4.7e-28 Score=242.75 Aligned_cols=295 Identities=17% Similarity=0.206 Sum_probs=211.7
Q ss_pred CCCeEEcCCCC-CCCCChHHHHHHHHHHHHcCCC-------CCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChH
Q 014172 94 GVSVIRLAAGE-PDFDTPVLIAEAGINAIREGFT-------RYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAK 165 (429)
Q Consensus 94 g~~~i~L~~g~-~~~~~p~~v~~a~~~~~~~~~~-------~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~ 165 (429)
|++.++++.++ .+++.++.+.+++.+++..... .|+......+|++++++++ | .++.|++++|+
T Consensus 45 ~~~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~----g---~~~~i~~~sG~- 116 (410)
T PRK13392 45 PRRVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLH----G---KESALLFTSGY- 116 (410)
T ss_pred CceEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHh----C---CCCEEEECcHH-
Confidence 45678888776 7888899999999998865211 1221112456666666665 4 34667777775
Q ss_pred HHHHHHHHHhcC--CCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhc----ccCCcEEEEcCCCC
Q 014172 166 QSILQAVLAVCS--PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL----TEKSRLLILCSPSN 239 (429)
Q Consensus 166 ~al~~~l~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l----~~~~~~i~l~~p~N 239 (429)
+++..++..++. +||.|+++.+.|..+...++..|+++..++. + |.+.+++.+ .+++++|++++|+|
T Consensus 117 ~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~---~----d~~~l~~~l~~~~~~~t~~v~i~~~~n 189 (410)
T PRK13392 117 VSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRH---N----DLADLEEQLASVDPDRPKLIAFESVYS 189 (410)
T ss_pred HHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeC---C----CHHHHHHHHHhccCCCCEEEEEeCCCC
Confidence 566667776653 8999988888888888888889999877753 2 444444444 35789999999999
Q ss_pred CccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCc-eEEEeccChhcccccceeeEEEcCH
Q 014172 240 PTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER-TLTVNGFSKAFAMTGWRLGYIAGPK 318 (429)
Q Consensus 240 PtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~-~i~~~S~SK~~~~~G~R~G~v~~~~ 318 (429)
|||.+++ +++|.++|++| ++++|+||+|....|+.... .+....+..++ .++++||||.||++| ||+++++
T Consensus 190 ~tG~~~~---l~~i~~l~~~~-~~~livDea~~~g~~g~~g~-g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~~ 261 (410)
T PRK13392 190 MDGDIAP---IEAICDLADRY-NALTYVDEVHAVGLYGARGG-GIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAASA 261 (410)
T ss_pred CCccccc---HHHHHHHHHHc-CCEEEEECCccccCcCCCCC-chhhhccCCCCCcEEEEEChHhhhccc---chhhcCH
Confidence 9999999 89999999999 99999999999655543221 11121111223 488999999999888 9999999
Q ss_pred HHHHHHHHHhhcc--cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEec
Q 014172 319 HFVAACNKIQSQF--TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDF 396 (429)
Q Consensus 319 ~~~~~l~~~~~~~--~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l 396 (429)
++++.+++....+ +.+.+.+.+.++.++|+. .+.....+++++++++++.+.|+++ |+++.+++++++ .+.+
T Consensus 262 ~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~-~i~~ 335 (410)
T PRK13392 262 DLIDFVRSFAPGFIFTTALPPAVAAGATAAIRH----LKTSQTERDAHQDRVAALKAKLNAN-GIPVMPSPSHIV-PVMV 335 (410)
T ss_pred HHHHHHHHhCcchhccCcCCHHHHHHHHHHHHH----HhcCHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCEE-EEEe
Confidence 9999888766543 334566778888888875 2333456678899999999999988 888877777764 3444
Q ss_pred CCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 397 STYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.. .+..+++++|++++||.+
T Consensus 336 ~~~-----------~~~~~~~~~L~~~~GI~v 356 (410)
T PRK13392 336 GDP-----------TLCKAISDRLMSEHGIYI 356 (410)
T ss_pred CCH-----------HHHHHHHHHHHHhCCEEE
Confidence 321 135789999987779886
No 122
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.96 E-value=2.5e-27 Score=236.98 Aligned_cols=296 Identities=19% Similarity=0.193 Sum_probs=215.7
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCC---------CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPN---------AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~---------~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~ 166 (429)
+.|.|+.+--. +.|..+.+++.+.+.....+.... ....++|+.+++++ |.. ++++|++|+|+++
T Consensus 19 ~~~yld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g~~-~~~~i~~~~~~t~ 92 (401)
T PRK10874 19 AGVYLDSAATA-LKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLL----NAP-DAKNIVWTRGTTE 92 (401)
T ss_pred ceEEEeCCccc-CCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHc----CCC-CCCEEEEECCHHH
Confidence 47888888765 357789999988876422111100 11345666666665 421 6789999999999
Q ss_pred HHHHHHHHh----cCCCCEEEEcCCCCCC----hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCC
Q 014172 167 SILQAVLAV----CSPGDEVIIPAPFWVS----YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPS 238 (429)
Q Consensus 167 al~~~l~~l----~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~ 238 (429)
+++.++.++ +++||+|++++|.|++ +...++..|++++.++.+. ++.+|++++++.+++++++|++++|+
T Consensus 93 ~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv~i~~~~ 170 (401)
T PRK10874 93 SINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGA--DRLPDVDLLPELITPRTRILALGQMS 170 (401)
T ss_pred HHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCC--CCcCCHHHHHHhcCcCcEEEEEeCCc
Confidence 999999997 4789999999999875 4456778899999999853 45689999999999999999999999
Q ss_pred CCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCH
Q 014172 239 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK 318 (429)
Q Consensus 239 NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~ 318 (429)
||||.+++ +++|+++|+++ |+++|+|++|+...+ +..+.. .+..+++.|++|.+|.+| +||+++++
T Consensus 171 n~tG~~~~---~~~i~~l~~~~-g~~~ivD~a~~~g~~----~~~~~~----~~~d~~~~s~~K~~gp~G--~G~l~~~~ 236 (401)
T PRK10874 171 NVTGGCPD---LARAITLAHQA-GMVVMVDGAQGAVHF----PADVQA----LDIDFYAFSGHKLYGPTG--IGVLYGKS 236 (401)
T ss_pred ccccCcCC---HHHHHHHHHHc-CCEEEEECCcccccc----cCCchh----cCCCEEEEecccccCCCc--cEEEEEch
Confidence 99999999 88999999999 999999999975222 122222 245588899999988666 69999999
Q ss_pred HHHHHHHHHh---------------------hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 014172 319 HFVAACNKIQ---------------------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 377 (429)
Q Consensus 319 ~~~~~l~~~~---------------------~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 377 (429)
++++.+..+. .....+++..++.++.++++.- .+....+..++.++.++++.+.|++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l--~~~g~~~~~~~~~~l~~~l~~~l~~ 314 (401)
T PRK10874 237 ELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWL--ADIDINQAESWSRSLATLAEDALAK 314 (401)
T ss_pred HHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 8887654221 0011234555666666666530 0222445667778889999999999
Q ss_pred CCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 378 LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 378 l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++|+++..+..+.++++.+++. +..++.+.|.+ +||.|
T Consensus 315 ~~g~~~~~~~~~~i~~~~~~~~------------~~~~~~~~L~~-~gI~v 352 (401)
T PRK10874 315 LPGFRSFRCQDSSLLAFDFAGV------------HHSDLVTLLAE-YGIAL 352 (401)
T ss_pred CCCEEEeCCCCCcEEEEEECCc------------CHHHHHHHHHH-CCcEE
Confidence 8898877655555566777642 56788877755 58876
No 123
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.96 E-value=1.1e-27 Score=239.22 Aligned_cols=300 Identities=22% Similarity=0.308 Sum_probs=218.8
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCC-----CCCCHHHHHHHHHHHHhhcCCCCCCCcEEEec-ChHHHH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTP-----NAGTLELRSAICHKLKEENGLSYTPDQILVSN-GAKQSI 168 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~-----~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~-G~~~al 168 (429)
.++++|+.|.|++++|+.+.++..++ ...+.|++ ..|.+++++++++++.+.+|. +.+++++++ |++++.
T Consensus 20 ~~~~~l~~g~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~--~~~~v~~~~~g~~~~~ 95 (398)
T cd00613 20 QSMSFLGSGTYKHNPPAVIKRNILEN--EFYTAYTPYQPEISQGRLQALFELQTMLCELTGM--DVANASLQDEATAAAE 95 (398)
T ss_pred cCcccccccccCCcCcHHHHHHhccc--cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCC--CccceeccCchHHHHH
Confidence 35699999999999998888877766 33456666 689999999999999999985 444676666 455555
Q ss_pred HHHHHHhcCC--CCEEEEcCCCCCChHHHHHHcC----CEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCcc
Q 014172 169 LQAVLAVCSP--GDEVIIPAPFWVSYPEMARIAD----ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTG 242 (429)
Q Consensus 169 ~~~l~~l~~~--gd~Vlv~~p~y~~~~~~~~~~g----~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG 242 (429)
..++.+++.+ ||+|++++|.|+.+...+...| ++++.+++++ ++.+|++++++++++++++|++++|+ |||
T Consensus 96 ~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~t~~viv~~~~-~~G 172 (398)
T cd00613 96 AAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDE--GGTVDLEALKEEVSEEVAALMVQYPN-TLG 172 (398)
T ss_pred HHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCC--CCCcCHHHHHHhcCCCeEEEEEECCC-CCc
Confidence 5555666666 9999999999999999888887 9999998853 35689999999999999999999985 899
Q ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccc----cceeeEEEcCH
Q 014172 243 SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT----GWRLGYIAGPK 318 (429)
Q Consensus 243 ~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----G~R~G~v~~~~ 318 (429)
.+.+ .+++|.++|++| |+++|+|+++...... .. .+..+.+++++|++|++ ++ |+|+||++.++
T Consensus 173 ~~~~--~l~~i~~la~~~-g~~livD~~~~~~~~~----~~----~~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~ 240 (398)
T cd00613 173 VFED--LIKEIADIAHSA-GALVYVDGDNLNLTGL----KP----PGEYGADIVVGNLQKTG-VPHGGGGPGAGFFAVKK 240 (398)
T ss_pred eecc--hHHHHHHHHHhc-CCEEEEEeccccccCC----CC----hHHcCCCEEEeeccccC-CCCCCCCCceeEEEEhh
Confidence 9954 469999999999 9999999987542211 01 11235669999999998 56 89999999998
Q ss_pred HHHHHHHHH------------------------------hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Q 014172 319 HFVAACNKI------------------------------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERR 368 (429)
Q Consensus 319 ~~~~~l~~~------------------------------~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r 368 (429)
++++.+... ......+.....+.+...+... ..+.++++++++++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~---~~~g~~~~~~~~~~~~ 317 (398)
T cd00613 241 ELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYL---GPEGLKEIAERAHLNA 317 (398)
T ss_pred hhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHh---CHHHHHHHHHHHHHHH
Confidence 887764110 0001111223333333333333 3567888999999999
Q ss_pred HHHHHHhccCCCceeecCCceEE--EEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 369 DFLVKSFGELEGVKMSEPQGAFY--LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 369 ~~l~~~L~~l~g~~~~~p~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+++.+.|+++++.. .+.+.++ ++++++...+ .+..+++++|+++ ||.+
T Consensus 318 ~~l~~~L~~~~~~~--~~~~~~~~~v~~~~~~~~~---------~~~~~~~~~L~~~-gi~~ 367 (398)
T cd00613 318 NYLAKRLKEVGGVL--PFNGPFFHEFVLRLPPLYG---------IRAEDLAKALIDG-GFHA 367 (398)
T ss_pred HHHHHHHHhcCCcc--cCCCCeeEEEEEEcCCcch---------HHHHHHHHhhhhc-Cccc
Confidence 99999999885443 2444444 5677753100 2577899998876 7654
No 124
>PLN02721 threonine aldolase
Probab=99.96 E-value=7.9e-28 Score=236.38 Aligned_cols=296 Identities=19% Similarity=0.294 Sum_probs=203.1
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHH-HHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh
Q 014172 97 VIRLAAGEPDFDTPVLIAEAGINA-IREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 175 (429)
Q Consensus 97 ~i~L~~g~~~~~~p~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l 175 (429)
+|+|+.|.++. +++.+.+++.+. .......| .+...+|+++++++++. +.+++++++++++..++.++
T Consensus 7 ~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~--~~~~~~l~~~la~~~~~--------~~~~~~~~Gs~a~~~~l~~~ 75 (353)
T PLN02721 7 VVDLRSDTVTK-PTDAMRAAMANAEVDDDVLGY--DPTALRLEEEMAKIFGK--------EAALFVPSGTMGNLISVLVH 75 (353)
T ss_pred hhhhhcccccC-CCHHHHHHHHhccCCCcccCC--CHHHHHHHHHHHHHhCC--------ceeEEecCccHHHHHHHHHH
Confidence 68999999986 567788887653 22222333 33468999999999741 23455555565666778888
Q ss_pred cC-CCCEEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc-------cCCcEEEEcC-CCCCccC
Q 014172 176 CS-PGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLT-------EKSRLLILCS-PSNPTGS 243 (429)
Q Consensus 176 ~~-~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~-------~~~~~i~l~~-p~NPtG~ 243 (429)
++ +||+|++++|+|..... .+...|++++.+|.+ .++.+|++.+++.++ +++++|++++ ++||||.
T Consensus 76 ~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~ 153 (353)
T PLN02721 76 CDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNN--EDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGR 153 (353)
T ss_pred ccCCCCeEEEcCccceehhcccchhhhcCceeEecCCC--cCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCc
Confidence 87 99999999999865444 577889999999875 345689999999997 6889999966 5789999
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeE-EEcCHHHHH
Q 014172 244 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY-IAGPKHFVA 322 (429)
Q Consensus 244 ~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~-v~~~~~~~~ 322 (429)
+++.+++++|.++|++| |+++|+|++|....+.. ...+...+.. +...++.||||.++. ++|| +++++++++
T Consensus 154 ~~~~~~l~~l~~l~~~~-g~~livD~a~~~~~~~~-~~~~~~~~~~--~~d~~~~s~sK~l~~---~~G~~~~~~~~~~~ 226 (353)
T PLN02721 154 CLSVEYTDKVGELAKRH-GLKLHIDGARIFNASVA-LGVPVHRLVK--AADSVSVCLSKGLGA---PVGSVIVGSKSFIR 226 (353)
T ss_pred cccHHHHHHHHHHHHHc-CCEEEEEchhhhcchhh-hCCCHHHHhh--hCCEEEEecccccCC---ceeeEEecCHHHHH
Confidence 99999999999999999 99999999986422110 0111111111 223456679999873 3565 678999988
Q ss_pred HHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCcee--ecCCceEEEEEecCCcc
Q 014172 323 ACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM--SEPQGAFYLFIDFSTYY 400 (429)
Q Consensus 323 ~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~--~~p~~~~~~~~~l~~~~ 400 (429)
.+.........+++..++.++...... +++++.+. +..++++.+.+.|++++++.+ .+|++ +|+|++++...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~-~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~~~~~~~~~~ 300 (353)
T PLN02721 227 KAKRLRKTLGGGMRQVGVLAAAALVAL----QENVPKLE-DDHKKAKLLAEGLNQIKGLRVNVAAVET-NIVYFDITDGS 300 (353)
T ss_pred hHHHHHHhcCCCeehhHHHHHHHHHHH----HHHHHHHH-HHHHHHHHHHHHHHhCCCcEEecCCccc-eEEEEEccCCc
Confidence 877766544433433433333222221 33444433 335678899999998878754 44555 45999987420
Q ss_pred CCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 401 GSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+ .+..+++++|.+ .||.+
T Consensus 301 ~---------~~~~~~~~~L~~-~gi~v 318 (353)
T PLN02721 301 R---------ITAEKLCKSLEE-HGVLL 318 (353)
T ss_pred c---------ccHHHHHHHHHh-CCcEE
Confidence 0 157889999974 58875
No 125
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.96 E-value=2.3e-27 Score=236.97 Aligned_cols=296 Identities=19% Similarity=0.183 Sum_probs=215.1
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCC--CCCCCCC-------CCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGF--TRYTPNA-------GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~--~~Y~~~~-------G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~ 166 (429)
+.|.|+.+--. ++|+.+.+++.+.+.... ..+++.. ...++|+.++++++ .. ++++|++|+|+++
T Consensus 16 ~~iyld~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g----~~-~~~~i~~t~g~t~ 89 (398)
T TIGR03392 16 GTVYLDSAATA-LKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLN----AP-DAENIVWTRGTTE 89 (398)
T ss_pred CeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhC----CC-CCCeEEEeCChHH
Confidence 47899888766 357889999888775321 1122211 13457777777763 21 4689999999999
Q ss_pred HHHHHHHHh----cCCCCEEEEcCCCCCC----hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCC
Q 014172 167 SILQAVLAV----CSPGDEVIIPAPFWVS----YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPS 238 (429)
Q Consensus 167 al~~~l~~l----~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~ 238 (429)
+++.++.++ +++||+|++++|.|++ +...++..|++++.++++. ++.+|++.+++++++++++|++++|+
T Consensus 90 ~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~~i~~~t~lv~i~~~~ 167 (398)
T TIGR03392 90 SINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGA--DLLPDIRQLPELLTPRTRILALGQMS 167 (398)
T ss_pred HHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHHhccCceEEEEECcc
Confidence 999999987 4789999999999876 4456788999999999864 35689999999999999999999999
Q ss_pred CCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCH
Q 014172 239 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK 318 (429)
Q Consensus 239 NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~ 318 (429)
||||.+++ +++|+++|+++ |+++|+|++|+...+ +..+.. .+..+++.|++|.+|++| +||+++++
T Consensus 168 n~tG~~~~---~~~i~~~~~~~-~~~~ivD~a~~~~~~----~~~~~~----~~~d~~~~s~~K~~gp~G--~G~l~~~~ 233 (398)
T TIGR03392 168 NVTGGCPD---LARAITLAHQY-GAVVVVDGAQGVVHG----PPDVQA----LDIDFYAFSGHKLYGPTG--IGVLYGKT 233 (398)
T ss_pred ccccccCC---HHHHHHHHHHc-CCEEEEEhhhhcCCC----CCChhh----cCCCEEEEecccccCCCc--eEEEEEcH
Confidence 99999999 88999999999 999999999975322 122222 234578888999988666 89999999
Q ss_pred HHHHHHHHHh---------------------hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 014172 319 HFVAACNKIQ---------------------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 377 (429)
Q Consensus 319 ~~~~~l~~~~---------------------~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 377 (429)
++++.+.... +....+++..+..++.++++.- .+..+++..++.++.++++.+.|++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l--~~~g~~~i~~~~~~l~~~l~~~l~~ 311 (398)
T TIGR03392 234 ELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWL--TDIDIAAAEAWSVSLADLAEERLAQ 311 (398)
T ss_pred HHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 8877663221 0011134444555555555430 0223456677788889999999999
Q ss_pred CCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 378 LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 378 l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++|+++..+..+.++++.+++. +..++.+.|.+ +||.|
T Consensus 312 l~g~~~~~~~~~~i~~~~~~~~------------~~~~l~~~L~~-~gI~v 349 (398)
T TIGR03392 312 LPGFRSFRCPGSSLLAFDFAGV------------HHSDLAALLAE-SGIAL 349 (398)
T ss_pred CCCeEEeCCCCCcEEEEEeCCc------------CHHHHHHHHHh-CCEEE
Confidence 8898876544455566777642 57788888755 58876
No 126
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.96 E-value=2.1e-27 Score=237.60 Aligned_cols=301 Identities=16% Similarity=0.114 Sum_probs=217.4
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcC-------CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREG-------FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~-------~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~a 167 (429)
++.++|..|++.. ++.+.+++...+... ...|+...+..++++.+++++.+.+|.+ ..+|++++ ++++
T Consensus 19 ~~~~~~~~~~~~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~--~~~v~~~s-gt~a 93 (402)
T cd00378 19 RETLELIASENFT--SPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE--YANVQPHS-GSQA 93 (402)
T ss_pred HhCeeeeccCCcC--CHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC--ceeeecCC-cHHH
Confidence 3579998888764 678888887654221 1234455566788888888888888853 34565554 5789
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCCChHHH-----HHHcCCEEEEecCCCC-CCCCCCHHHHHhhcc-cCCcEEEEcCCCCC
Q 014172 168 ILQAVLAVCSPGDEVIIPAPFWVSYPEM-----ARIADATPVILPTRIS-ENFLLDPKVLESKLT-EKSRLLILCSPSNP 240 (429)
Q Consensus 168 l~~~l~~l~~~gd~Vlv~~p~y~~~~~~-----~~~~g~~~~~v~~~~~-~~~~~d~e~l~~~l~-~~~~~i~l~~p~NP 240 (429)
+..++.+++++||+|++++|+|.++... ++..|.+++.+++..+ +++.+|++++++.+. ++++++++++|+||
T Consensus 94 ~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~ 173 (402)
T cd00378 94 NLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASAYP 173 (402)
T ss_pred HHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCcccC
Confidence 9999999999999999999999877543 6678888888877544 267899999999985 68999999999886
Q ss_pred ccCCCCHHHHHHHHHHHHhCCCeEEEEccCC-cccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCH-
Q 014172 241 TGSVYPKNLLDEIARIVAKHPRLLVLSDEIY-EHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK- 318 (429)
Q Consensus 241 tG~~~~~~~l~~I~~~a~~~~~i~vi~Deay-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~- 318 (429)
+ ..+ +++|+++|++| |++||+|++| .++.+.+....++. ...++++|+||++ +|+|.||+++++
T Consensus 174 ~--~~~---~~~I~~l~~~~-~~~li~D~a~~~g~~~~g~~~~~~~------~~dv~~~s~sK~l--~G~~gg~i~~~~~ 239 (402)
T cd00378 174 R--PID---FKRFREIADEV-GAYLLVDMAHVAGLVAGGVFPNPLP------GADVVTTTTHKTL--RGPRGGLILTRKG 239 (402)
T ss_pred C--CcC---HHHHHHHHHhc-CCEEEEEccchhhhhhcccCCCccc------CCcEEEeccccCC--CCCCceEEEeccH
Confidence 4 455 88999999999 9999999996 44544442222221 1237899999987 789999999987
Q ss_pred HHHHHHHHHhhcccCCCch-HHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceee-cCCceEEEEEec
Q 014172 319 HFVAACNKIQSQFTSGASS-ISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-EPQGAFYLFIDF 396 (429)
Q Consensus 319 ~~~~~l~~~~~~~~~~~~~-~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~-~p~~~~~~~~~l 396 (429)
++++.+.+.......+.+. ..+.++..++... ...+.++.+++++++++++.+.|+++ |+++. .|.+++|+|+++
T Consensus 240 ~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~v~v~~ 316 (402)
T cd00378 240 ELAKKINSAVFPGLQGGPHLHVIAAKAVALKEA--LEPEFKAYAKQVVENAKALAEALKER-GFKVVSGGTDNHLVLVDL 316 (402)
T ss_pred HHHHHHHHHhCccccCCchHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEeecCCCCeEEEEeC
Confidence 8888887665444333333 2333333344320 12256778888999999999999998 88775 467899999999
Q ss_pred CCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 397 STYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.. + .+...+. ++++++||.+
T Consensus 317 ~~~-~---------~~~~~~~-~~l~~~gI~v 337 (402)
T cd00378 317 RPK-G---------ITGKAAE-DALEEAGITV 337 (402)
T ss_pred Ccc-C---------CCHHHHH-HHHHHcCcEE
Confidence 742 0 1344454 4567779987
No 127
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.96 E-value=2.5e-27 Score=232.43 Aligned_cols=297 Identities=19% Similarity=0.227 Sum_probs=213.4
Q ss_pred CeEEcCCCC-CCCCChHHHHHHHHHHHHcCCCC---CCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHH
Q 014172 96 SVIRLAAGE-PDFDTPVLIAEAGINAIREGFTR---YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 171 (429)
Q Consensus 96 ~~i~L~~g~-~~~~~p~~v~~a~~~~~~~~~~~---Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~ 171 (429)
.+++|+.++ ...+.|+++++++.+.+++...+ |....|..+.++.+.+.+.+.+|. ++ +++++++++++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~---~~-~iv~~sg~~a~~~~ 77 (349)
T cd06454 2 KVLNFCSNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGK---EA-ALVFSSGYAANDGV 77 (349)
T ss_pred CceecccCCccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCC---CC-EEEeccHHHHHHHH
Confidence 467777766 45555799999999998753222 222234455555555555555552 23 45556667788888
Q ss_pred HHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-----CCcEEEEcCCCCCccCCCC
Q 014172 172 VLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-----KSRLLILCSPSNPTGSVYP 246 (429)
Q Consensus 172 l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-----~~~~i~l~~p~NPtG~~~~ 246 (429)
+++++++||.|++++|+|+++...++..|++++.++. +|++.+++.+++ +++++++++++||||...+
T Consensus 78 ~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~ 150 (349)
T cd06454 78 LSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKH-------NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP 150 (349)
T ss_pred HHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC
Confidence 8999999999999999999999889999999988762 477888887763 4677788999999999988
Q ss_pred HHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCC-CCCCceEEEeccChhcccccceeeEEEcCHHHHHHHH
Q 014172 247 KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP-GMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN 325 (429)
Q Consensus 247 ~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~ 325 (429)
+++|.++|++| ++++|+|++|....+.... ..+..+. ...+.+++++|+||.++++| ||+++++++++.+.
T Consensus 151 ---~~~i~~~~~~~-~~~livD~a~~~g~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~~~~~~~~~ 222 (349)
T cd06454 151 ---LPELVDLAKKY-GAILFVDEAHSVGVYGPHG-RGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGSKELIDYLR 222 (349)
T ss_pred ---HHHHHHHHHHc-CCEEEEEccccccccCCCC-CChhhhccccccCcEEEeechhhhcccC---CEEECCHHHHHHHH
Confidence 89999999999 9999999999754332111 1111111 22467899999999998655 99999999888876
Q ss_pred HHhhcc--cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCc
Q 014172 326 KIQSQF--TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSE 403 (429)
Q Consensus 326 ~~~~~~--~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~ 403 (429)
.....+ +...+...+.++.++++. ..+ .+..+++++++++.+.+.|.++ |+.+..+.++++.++.++..
T Consensus 223 ~~~~~~~~~~~~~~~~~~a~~~~l~~---~~~-~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~~~~~~---- 293 (349)
T cd06454 223 SYARGFIFSTSLPPAVAAAALAALEV---LQG-GPERRERLQENVRYLRRGLKEL-GFPVGGSPSHIIPPLIGDDP---- 293 (349)
T ss_pred HhchhhhccCCCCHHHHHHHHHHHHH---Hhc-CHHHHHHHHHHHHHHHHHHHhc-CCcccCCCCCcEEEEeCCCh----
Confidence 654322 224556666677777764 222 4567889999999999999987 77776665666555544421
Q ss_pred ccCCCCCCChHHHHHHHHHhCCeec
Q 014172 404 AEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 404 ~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+..++++.|+++ ||.+
T Consensus 294 -------~~~~~~~~~L~~~-gI~~ 310 (349)
T cd06454 294 -------AKAVAFSDALLER-GIYV 310 (349)
T ss_pred -------HHHHHHHHHHHhC-CceE
Confidence 2567899998877 8875
No 128
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=2.3e-27 Score=236.89 Aligned_cols=305 Identities=16% Similarity=0.195 Sum_probs=217.5
Q ss_pred cCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..||+..|.+ .++. ++.+.+++.+.+.... +....+..++++++++++.+..| .+++++|+|+++++.
T Consensus 37 dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~la~~l~~~~~----~~~v~~~~gg~eA~~ 110 (396)
T PRK02627 37 DGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLI--HTSNLYYIEPQEELAEKLVELSG----MDKVFFCNSGAEANE 110 (396)
T ss_pred CCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhcc--ccccccCCHHHHHHHHHHHhhcC----CCEEEECCCcHHHHH
Confidence 5778999998864 4555 5889999999886532 11222346889999999987754 379999999999999
Q ss_pred HHHHHhcCCC-------CEEEEcCCCCCChHHHHHHcCCEEE----EecCCCCCCC----CCCHHHHHhhcccCCcEEEE
Q 014172 170 QAVLAVCSPG-------DEVIIPAPFWVSYPEMARIADATPV----ILPTRISENF----LLDPKVLESKLTEKSRLLIL 234 (429)
Q Consensus 170 ~~l~~l~~~g-------d~Vlv~~p~y~~~~~~~~~~g~~~~----~v~~~~~~~~----~~d~e~l~~~l~~~~~~i~l 234 (429)
.+++.+...+ ++|++..++|.++.......+.... ..++. .++ ..|++++++++.+++++|++
T Consensus 111 ~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~i~~~~~~vii 188 (396)
T PRK02627 111 AAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLV--EGFIYVPFNDIEALKAAITDKTAAVML 188 (396)
T ss_pred HHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCC--CCceEeCCCCHHHHHHhcCCCeEEEEE
Confidence 9999775433 6799999999988766555443221 11111 111 12899999999888999999
Q ss_pred cCCCCCcc-CCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeE
Q 014172 235 CSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY 313 (429)
Q Consensus 235 ~~p~NPtG-~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~ 313 (429)
+.++||+| .+++.+.+++|.++|++| ++++|+||+|.++.+.+. ..++.... .... +.||||.++ +|+|+||
T Consensus 189 ~p~~~~~G~~~~~~~~l~~l~~l~~~~-~~~lI~DE~~~g~g~~g~-~~~~~~~~-~~pd---i~t~sK~~~-~G~rig~ 261 (396)
T PRK02627 189 EPIQGEGGVNPADKEYLQALRELCDEN-GILLILDEVQTGMGRTGK-LFAYQHYG-IEPD---IMTLAKGLG-GGVPIGA 261 (396)
T ss_pred ecccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhcCCCccCc-eeeehhcC-CCCC---EEEEcchhh-CCcccEE
Confidence 98999999 788999999999999999 999999999998766543 11221221 1112 447999999 9999999
Q ss_pred EEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEE
Q 014172 314 IAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLF 393 (429)
Q Consensus 314 v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~ 393 (429)
+++++++++.+.......+++.+.+.|.++.++|+.... +++.++.++..+..++.+.+.+.+++.+....+ .|+++|
T Consensus 262 ~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~~~~ 339 (396)
T PRK02627 262 VLAKEKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEE-EGLLENAAEVGEYLRAKLRELLEKYPGIKEVRG-LGLMIG 339 (396)
T ss_pred EEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHHhCCCeeeecc-CcEEEE
Confidence 999999988886554556677899999999999975211 233334444444444444444443433333333 466789
Q ss_pred EecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 394 IDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 394 ~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++++. +..+++++|+++ ||.+
T Consensus 340 i~~~~-------------~~~~~~~~l~~~-Gv~v 360 (396)
T PRK02627 340 IELDR-------------PAAEIVKKALEK-GLLI 360 (396)
T ss_pred EEecC-------------cHHHHHHHHHHC-CeEE
Confidence 98842 578999999987 9876
No 129
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.96 E-value=7.5e-27 Score=230.24 Aligned_cols=292 Identities=15% Similarity=0.159 Sum_probs=202.9
Q ss_pred CCCChHHHHHHHHHHHHcCCCC---------CCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhc
Q 014172 106 DFDTPVLIAEAGINAIREGFTR---------YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC 176 (429)
Q Consensus 106 ~~~~p~~v~~a~~~~~~~~~~~---------Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~ 176 (429)
+-+..+.+.+++.+.... ... +...+-..++++++++++ | . +++++|+|+++++..++.+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~--~~i~~~~g~t~al~~~l~~~~ 80 (361)
T cd06452 10 GGRLTPEARKALIEWGDG-YSVCDFCRGRLDEIEKPPIKDFHHDLAEFL----G--M--DEARVTPGAREGKFAVMHSLC 80 (361)
T ss_pred CCCCCHHHHHHHHHHhcc-cCCccccccccccccCchHHHHHHHHHHHc----C--C--ceEEEeCCHHHHHHHHHHHhc
Confidence 334467777777766421 110 001122357777777775 4 2 789999999999999999999
Q ss_pred CCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc-------cCCcEEEEcCCCCCccCCCCHHH
Q 014172 177 SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT-------EKSRLLILCSPSNPTGSVYPKNL 249 (429)
Q Consensus 177 ~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~-------~~~~~i~l~~p~NPtG~~~~~~~ 249 (429)
++||+|+++.++|.+....++..|++++.++.+.+++|.+|++.++++++ +++++|++++|+||||...+
T Consensus 81 ~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~--- 157 (361)
T cd06452 81 EKGDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD--- 157 (361)
T ss_pred CCCCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc---
Confidence 99999999999988877788999999999998765557899999999886 37889999999999999888
Q ss_pred HHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhh
Q 014172 250 LDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS 329 (429)
Q Consensus 250 l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~ 329 (429)
+++|.++|+++ ++++|+|++|... ..+.+... .+..++++|+||.++ ++.|+||+++++++++.+.+...
T Consensus 158 ~~~i~~~~~~~-~~~vivD~a~~~g----~~~~~~~~----~~~d~~~~s~~K~l~-~~~~~G~l~~~~~~~~~l~~~~~ 227 (361)
T cd06452 158 AKKIAKVCHEY-GVPLLLNGAYTVG----RMPVSGKE----LGADFIVGSGHKSMA-ASAPIGVLATTEEWADIVFRTSQ 227 (361)
T ss_pred HHHHHHHHHHc-CCeEEEECCcccC----CcCCCHHH----cCCCEEEecCCcccc-CCCCeEEEEECHHHHHHHhcccc
Confidence 88999999999 9999999999852 11122222 345699999999998 66699999999999998876543
Q ss_pred ccc--------CCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeec--CCceEEEEEecCCc
Q 014172 330 QFT--------SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE--PQGAFYLFIDFSTY 399 (429)
Q Consensus 330 ~~~--------~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~--p~~~~~~~~~l~~~ 399 (429)
.+. .......+.++.+++.. ..++++...+. .++++++.+.|++++|+++.. +....|+.++.+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~al~~---~~~~~~~~~~~-~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~ 303 (361)
T cd06452 228 MFKIKEVELLGCTLRGAPLVTLMASFPH---VKERVKRWDEE-VEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSF 303 (361)
T ss_pred ccccceeeeeccccCchHHHHHHHHHHH---HHHHHHHHHHH-HHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCc
Confidence 221 11122233444444442 13334333333 345578899999998988762 33344566776521
Q ss_pred cCCcccCCCCCCChHHHHHHHHHhCCee
Q 014172 400 YGSEAEGFGKIENSESLCRYLLDKAQVL 427 (429)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~Ll~~~gV~ 427 (429)
.. .... ...+..++.++|+++ ||.
T Consensus 304 ~~-~~~~--~~~~~~~~~~~L~~~-gI~ 327 (361)
T cd06452 304 DE-IAKK--HKRRGYFLYSELKKR-GIH 327 (361)
T ss_pred ch-hhhh--ccccchhHHHHHHHc-Cce
Confidence 00 0000 001345799998776 886
No 130
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.96 E-value=2.6e-27 Score=235.13 Aligned_cols=303 Identities=16% Similarity=0.194 Sum_probs=214.8
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..|+|..|. +.++. ++.+.+++.+++.+... ....+..+.++.+++.+.+.+|. +++++++|+++++.
T Consensus 25 ~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~l~~~la~~~g~----~~~~~~~sg~~a~~ 98 (379)
T TIGR00707 25 NGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVH--VSNLYYTEPQEELAEKLVEHSGA----DRVFFCNSGAEANE 98 (379)
T ss_pred CCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccc--cccccCCHHHHHHHHHHHhhCCC----CEEEEeCCcHHHHH
Confidence 567899999974 34454 58999999998875321 11112235566666666666663 49999999999999
Q ss_pred HHHHHhc---C----CCCEEEEcCCCCCChHHHHHHcCCEEEE----ecCCCCCCCCC--CHHHHHhhcccCCcEEEEcC
Q 014172 170 QAVLAVC---S----PGDEVIIPAPFWVSYPEMARIADATPVI----LPTRISENFLL--DPKVLESKLTEKSRLLILCS 236 (429)
Q Consensus 170 ~~l~~l~---~----~gd~Vlv~~p~y~~~~~~~~~~g~~~~~----v~~~~~~~~~~--d~e~l~~~l~~~~~~i~l~~ 236 (429)
.+++++. . +||+|++++|+|..+...+...+..... .++..+..+.. |++.+++.+++++++|+++.
T Consensus 99 ~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~p 178 (379)
T TIGR00707 99 AALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAVIVEP 178 (379)
T ss_pred HHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEEEEEc
Confidence 8888652 2 3799999999999988777766654422 23322211111 89999999988899999977
Q ss_pred CCCCccCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEE
Q 014172 237 PSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA 315 (429)
Q Consensus 237 p~NPtG~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~ 315 (429)
++||+|.. ++.+++++|.++|++| ++++|+||+|.++.+.+.. .++... ....+ +.+|||.++ +|+|+||++
T Consensus 179 ~~~~~g~~~~~~~~l~~i~~l~~~~-~~~~i~De~~~~~~~~g~~-~~~~~~-~~~~d---~~t~sK~~~-~G~riG~~~ 251 (379)
T TIGR00707 179 IQGEGGVNPASAEFLKALREICKDK-DALLIFDEVQTGIGRTGKF-FAYEHY-GIEPD---IITLAKGLG-GGVPIGATL 251 (379)
T ss_pred cccCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCccchh-hhHHhc-CCCCC---EEEEccccc-CCcccEEEE
Confidence 77788864 6899999999999999 9999999999987655421 121111 11222 337899999 999999999
Q ss_pred cCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC-C--CceeecCCceEEE
Q 014172 316 GPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL-E--GVKMSEPQGAFYL 392 (429)
Q Consensus 316 ~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l-~--g~~~~~p~~~~~~ 392 (429)
+++++++.+.........+.+.++|.++.++|+. .+ -.+..++++++++.+.+.|+++ . ++... +..|+|+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~---~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~g~~~ 325 (379)
T TIGR00707 252 AKEEVAEAFTPGDHGSTFGGNPLACAAALAVLEV---IE--KERLLENVKEKGDYFKERLEELGKNYPNKEV-RGKGLML 325 (379)
T ss_pred EcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHH---HH--hhhHHHHHHHHHHHHHHHHHHHHhhCCCCcc-ccCceEE
Confidence 9999998887654445566889999999998874 12 1245677777888888877764 1 22212 2356678
Q ss_pred EEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 393 FIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 393 ~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|+.++. +..+++++|.++ ||.+
T Consensus 326 ~~~~~~-------------~~~~~~~~l~~~-Gv~v 347 (379)
T TIGR00707 326 GIELEA-------------PCKDIVKKALEK-GLLV 347 (379)
T ss_pred EEEecC-------------cHHHHHHHHHHC-CcEE
Confidence 888863 467888887665 8876
No 131
>PLN02483 serine palmitoyltransferase
Probab=99.96 E-value=5.4e-27 Score=238.58 Aligned_cols=299 Identities=17% Similarity=0.198 Sum_probs=208.1
Q ss_pred CCCeEEcCCCC-CCCCC-----hHHHHHHHHHHHH---cCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecCh
Q 014172 94 GVSVIRLAAGE-PDFDT-----PVLIAEAGINAIR---EGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGA 164 (429)
Q Consensus 94 g~~~i~L~~g~-~~~~~-----p~~v~~a~~~~~~---~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~ 164 (429)
+++.+||++++ ..+.. ++.+.+++.+.-. .....|+...+..+|++++|++++ .++.|++++|.
T Consensus 99 ~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-------~~~ai~~~~G~ 171 (489)
T PLN02483 99 TRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-------KPAAIVFGMGY 171 (489)
T ss_pred CceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-------CCcEEEECCHH
Confidence 45689998877 55542 3445555444311 012337667778889999998874 45678887776
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc-------cCC-----cEE
Q 014172 165 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT-------EKS-----RLL 232 (429)
Q Consensus 165 ~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~-------~~~-----~~i 232 (429)
...+ .++.+++++||.|++++|+|.++...++..|++++.++.+ |.+++++.++ +++ +++
T Consensus 172 ~an~-~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~~k~l 243 (489)
T PLN02483 172 ATNS-TIIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKII 243 (489)
T ss_pred HHHH-HHHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhhhhccccccccCCceEE
Confidence 5544 6788899999999999999999999999999999999853 4455544432 222 555
Q ss_pred EEcC-CCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCC--CCCCccccCCCCCCceEEEeccChhcccccc
Q 014172 233 ILCS-PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP--ATHTSFASLPGMWERTLTVNGFSKAFAMTGW 309 (429)
Q Consensus 233 ~l~~-p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~--~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~ 309 (429)
+++. ..|++|.+.+ +++|+++|++| ++++|+||+|+...++. ........+. ..+++|+++||||+||++|
T Consensus 244 ivve~v~s~~G~~~~---l~~I~~la~~~-~~~livDEa~s~g~~G~~G~g~~~~~~v~-~~~~dI~~~SfSKs~g~~G- 317 (489)
T PLN02483 244 VIVEGIYSMEGELCK---LPEIVAVCKKY-KAYVYLDEAHSIGAVGKTGRGVCELLGVD-PADVDIMMGTFTKSFGSCG- 317 (489)
T ss_pred EEECCCCCCCCcccC---HHHHHHHHHHc-CCEEEEECcCccCccCCCCCchHHhcCCC-cccCcEEEEecchhcccCc-
Confidence 5544 4699999998 99999999999 99999999998544332 1122222322 2467899999999999887
Q ss_pred eeeEEEcCHHHHHHHHHHhhcc--cCCCchHHHHHHHHHHhc--CCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeec
Q 014172 310 RLGYIAGPKHFVAACNKIQSQF--TSGASSISQKAGVAALGL--GYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 385 (429)
Q Consensus 310 R~G~v~~~~~~~~~l~~~~~~~--~~~~~~~~q~aa~~~l~~--~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~ 385 (429)
||+++++++++.+....... ....+.....++.++|+. .....++..+++++++++++++.+.|+++ |+.+..
T Consensus 318 --G~i~~~~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~-G~~v~~ 394 (489)
T PLN02483 318 --GYIAGSKELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKM-GFEVLG 394 (489)
T ss_pred --eEEEcCHHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHC-CCcccC
Confidence 99999999999988764322 212233333334455531 00012345566889999999999999998 888776
Q ss_pred CCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 386 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 386 p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.++..+|+.+... .+..+|+++|+++ ||.|
T Consensus 395 ~~~sp~~~l~l~~~-----------~~~~~~~~~Ll~~-GI~v 425 (489)
T PLN02483 395 DNDSPVMPIMLYNP-----------AKIPAFSRECLKQ-NVAV 425 (489)
T ss_pred CCCCCEEEEEECCH-----------HHHHHHHHHHHHC-CcEE
Confidence 66666666665432 1456899999876 8876
No 132
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.96 E-value=3.7e-27 Score=233.04 Aligned_cols=263 Identities=14% Similarity=0.144 Sum_probs=192.8
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCC
Q 014172 135 LELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENF 214 (429)
Q Consensus 135 ~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~ 214 (429)
.++++.+|+++ | .+.+++++|+++++..++.+++++||.|+++.+.|.+....++..|++++.++.+.++++
T Consensus 54 ~~~~e~lA~~~----g----~~~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~ 125 (370)
T TIGR02539 54 HDFLEDLAEFL----G----MDEARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEY 125 (370)
T ss_pred HHHHHHHHHHh----C----CCceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHHHHHHcCCEEEEEecCCcccC
Confidence 45666666665 3 245778999999999999999999999999988876666788999999999998765568
Q ss_pred CCCHHHHHhhccc-------CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccC
Q 014172 215 LLDPKVLESKLTE-------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL 287 (429)
Q Consensus 215 ~~d~e~l~~~l~~-------~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~ 287 (429)
.+|++++++.+++ ++++|++++|+||||...+ +++|.++|+++ |+++|+||+|..... ......
T Consensus 126 ~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~~la~~~-~~~livDea~~~g~~----~~~~~~- 196 (370)
T TIGR02539 126 KVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVAKVCREK-GVPLLLNCAYTVGRM----PVSAKE- 196 (370)
T ss_pred CcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHHHHHHHc-CCeEEEECccccCCc----CCCHHH-
Confidence 8999999999863 6789999999999999999 88999999999 999999999987321 111111
Q ss_pred CCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccC--------CCchHHHHHHHHHHhcCCCChHHHHH
Q 014172 288 PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS--------GASSISQKAGVAALGLGYAGGEVVSK 359 (429)
Q Consensus 288 ~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~--------~~~~~~q~aa~~~l~~~~~~~~~~~~ 359 (429)
.+..++++||||+++ +|.|+||+++++++++.+.....++.. ......+.++.+++.. ..++++.
T Consensus 197 ---~~~di~v~s~sK~~~-~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~---~~~~l~~ 269 (370)
T TIGR02539 197 ---IGADFIVGSGHKSMA-ASGPCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPH---VVERVKR 269 (370)
T ss_pred ---cCCCEEEeeCccccc-CCCCEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHH---HHHHHHH
Confidence 245578899999999 677899999999999988876544322 1122245555566653 2455655
Q ss_pred HHHHHHHHHHHHHHHhccCCCceee--cCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCee
Q 014172 360 MVKAFRERRDFLVKSFGELEGVKMS--EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVL 427 (429)
Q Consensus 360 ~~~~~~~~r~~l~~~L~~l~g~~~~--~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~ 427 (429)
..+.++.. +++.+.|+++ |+++. .|..++|+++++|.... ...+ ...+...+.++|.++ ||.
T Consensus 270 ~~~~~~~~-~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~~~~-~~~~--~~~~~~~~~~~L~e~-GI~ 333 (370)
T TIGR02539 270 WDEEVKKT-RWFVAELEDI-GFIQLGQKPKEHDLVKFETPGFHE-IAQK--HKRRGYFLYEELKKR-GIH 333 (370)
T ss_pred HHHHHHHH-HHHHHHHHhC-CcEEEccCCCcCceEEEECCchhH-Hhhh--hccccHHHHHHHHhC-CCc
Confidence 55555554 5899999998 88763 36667778898863200 0000 001345688887766 885
No 133
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.96 E-value=2.6e-27 Score=231.33 Aligned_cols=268 Identities=19% Similarity=0.159 Sum_probs=197.1
Q ss_pred CCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEE
Q 014172 104 EPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVI 183 (429)
Q Consensus 104 ~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vl 183 (429)
++++++|+.+.+++.+.... ...|++..+..++++.+++++ | ++++++++|+++++..++.+++++||+|+
T Consensus 5 ~~~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~~a~~~----g----~~~~~~~~~gt~a~~~~~~~l~~~gd~v~ 75 (338)
T cd06502 5 DTVTGPTPEMLEAMAAANVG-DDVYGEDPTTAKLEARAAELF----G----KEAALFVPSGTAANQLALAAHTQPGGSVI 75 (338)
T ss_pred ccCCCCCHHHHHHHHhcccC-CcccCCCHHHHHHHHHHHHHh----C----CCeEEEecCchHHHHHHHHHhcCCCCeEE
Confidence 34566788999999886532 346766666667777777765 3 45788888888999999999999999999
Q ss_pred EcCCCCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-------CCcEEEEcCCCCCccCCCCHHHHHHH
Q 014172 184 IPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE-------KSRLLILCSPSNPTGSVYPKNLLDEI 253 (429)
Q Consensus 184 v~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-------~~~~i~l~~p~NPtG~~~~~~~l~~I 253 (429)
++.|+|..+.. .++..|++++.++.+ . +.+|+++|++++++ ++++|++++|+|| |.+++.+++++|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i 151 (338)
T cd06502 76 CHETAHIYTDEAGAPEFLSGVKLLPVPGE--N-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAI 151 (338)
T ss_pred EecCcceeeecCCcHHHHcCceEEeecCC--C-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHH
Confidence 99999876442 456689999999874 2 56899999999874 7899999999997 777799999999
Q ss_pred HHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcc--
Q 014172 254 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF-- 331 (429)
Q Consensus 254 ~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~-- 331 (429)
+++|++| |+++|+||+|..+....... ++..+.. +..+++.|+||.++++| .+++++++++++.+......+
T Consensus 152 ~~~~~~~-~~~livDea~~~~~~~~~~~-~~~~~~~--~~d~~~~s~sK~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~ 225 (338)
T cd06502 152 SALAKEN-GLPLHLDGARLANAAAALGV-ALKTYKS--GVDSVSFCLSKGGGAPV--GAVVVGNRDFIARARRRRKQAGG 225 (338)
T ss_pred HHHHHHc-CCeEeechHHHHHHHHhcCC-CHHHHHh--cCCEEEEeccccCCCcc--ceEEECCHHHHHHHHHHHHHhCC
Confidence 9999999 99999999986432111111 2222211 23366889999999887 234567889999887765433
Q ss_pred cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecC
Q 014172 332 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFS 397 (429)
Q Consensus 332 ~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~ 397 (429)
....+.+.+.++..+|+. ..+ .+..+++.++++++.+.|+++ |+.+.++.+++ +.++++
T Consensus 226 ~~~~~~~~~~a~~~~L~~----~~~-~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~-~~v~~~ 284 (338)
T cd06502 226 GMRQSGFLAAAGLAALEN----DLW-LRRLRHDHEMARRLAEALEEL-GGLESEVQTNI-VLLDPV 284 (338)
T ss_pred ChhhHHHHHHHHHHHhcC----chH-HHHHHHHHHHHHHHHHHHHhc-CCCcccccCCe-EEEecC
Confidence 233566777777777764 233 345577788889999999988 66666666666 556654
No 134
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.96 E-value=3.4e-26 Score=229.00 Aligned_cols=295 Identities=18% Similarity=0.243 Sum_probs=215.6
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCC--CC-------CCCCHHHHHHHHHHHHhhcCCCCC-CCcEEEecC
Q 014172 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRY--TP-------NAGTLELRSAICHKLKEENGLSYT-PDQILVSNG 163 (429)
Q Consensus 94 g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y--~~-------~~G~~~lr~~ia~~l~~~~g~~~~-~~~i~~t~G 163 (429)
|++++.|+.|... ++|+.+.+++.+.+.....+. +. ..+..++|+.++++++ .+ +++|++|+|
T Consensus 16 ~~~~~yld~~~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~------~~~~~~v~~~~g 88 (403)
T TIGR01979 16 GKPLVYLDSAATS-QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFIN------AASDEEIVFTRG 88 (403)
T ss_pred CCceEEEeCcccc-CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------cCCCCeEEEeCC
Confidence 5678999999877 467788899888765421110 00 0124477777877764 24 579999999
Q ss_pred hHHHHHHHHHHh----cCCCCEEEEcCCCCCCh----HHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEc
Q 014172 164 AKQSILQAVLAV----CSPGDEVIIPAPFWVSY----PEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC 235 (429)
Q Consensus 164 ~~~al~~~l~~l----~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~ 235 (429)
+++++.+++.++ +++||+|+++++.|++. ...++..|++++.++.+ .++.+|++.+++.+++++++++++
T Consensus 89 ~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~i~~~~~lv~~~ 166 (403)
T TIGR01979 89 TTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLD--DDGTLDLDDLEKLLTEKTKLVAIT 166 (403)
T ss_pred HHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC--CCCCCCHHHHHHHhccCCeEEEEE
Confidence 999999888875 57899999999988763 35566789999999986 345689999999999999999999
Q ss_pred CCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEE
Q 014172 236 SPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA 315 (429)
Q Consensus 236 ~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~ 315 (429)
+|+||||.+++ +++|.++|++| |+++|+|++|+.. ..+..+.. .+.++++.|++|.+|++| +||++
T Consensus 167 ~~~~~tG~~~~---~~~i~~~~~~~-~~~~ivD~a~~~g----~~~~~~~~----~~~d~~~~s~~K~~gp~G--~g~l~ 232 (403)
T TIGR01979 167 HVSNVLGTVNP---VEEIAKLAHQV-GAKVLVDGAQAVP----HMPVDVQA----LDCDFYVFSGHKMYGPTG--IGVLY 232 (403)
T ss_pred cccccccccCC---HHHHHHHHHHc-CCEEEEEchhhcC----ccccCccc----cCCCEEEEecccccCCCC--ceEEE
Confidence 99999999999 88999999999 9999999999752 22222222 356699999999988666 89999
Q ss_pred cCHHHHHHHHHHhh---------------------cccCCCchHHHHHHHHHHhcCCCChH-HHHHHHHHHHHHHHHHHH
Q 014172 316 GPKHFVAACNKIQS---------------------QFTSGASSISQKAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVK 373 (429)
Q Consensus 316 ~~~~~~~~l~~~~~---------------------~~~~~~~~~~q~aa~~~l~~~~~~~~-~~~~~~~~~~~~r~~l~~ 373 (429)
+++++++.+..... ....+++.....++..+++. ..+ ..+...++..+.++.+.+
T Consensus 233 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~---~~~~g~~~~~~~~~~l~~~l~~ 309 (403)
T TIGR01979 233 GKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDY---LEAIGLENIEAHEHELTAYALE 309 (403)
T ss_pred EchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHH---HHHhCHHHHHHHHHHHHHHHHH
Confidence 99887766531100 01123445555666666653 122 356778888889999999
Q ss_pred HhccCCCceeecCC-----ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 374 SFGELEGVKMSEPQ-----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 374 ~L~~l~g~~~~~p~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.|++++|+++..|. +++ +.+.++.. +..++.+.| ++.||.+
T Consensus 310 ~l~~~~g~~~~~~~~~~~~~~~-v~~~~~~~------------~~~~~~~~L-~~~gI~v 355 (403)
T TIGR01979 310 RLGEIPGLRIYGPRDAEDRGGI-ISFNVEGV------------HPHDVGTIL-DEEGIAV 355 (403)
T ss_pred HHhcCCCEEEeCCCCccccCce-EEEEeCCc------------CHHHHHHHH-hhCCEEE
Confidence 99988889887654 455 55666642 566777655 5568876
No 135
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.95 E-value=3.9e-26 Score=228.66 Aligned_cols=294 Identities=14% Similarity=0.188 Sum_probs=214.1
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCC---------CCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNA---------GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~---------G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~ 166 (429)
+.|.|+.+-.. +.|+.+++++.+.+.....+..... -..++|+++++++ |. .++++|++|+|+++
T Consensus 23 ~~iYld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~-~~~~~v~~t~g~t~ 96 (406)
T PRK09295 23 PLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFI----NA-RSAEELVFVRGTTE 96 (406)
T ss_pred ceEEEeCcccc-cCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHc----Cc-CCCCeEEEeCCHHH
Confidence 57899887755 3577889998887764221110111 1346666677665 32 15689999999999
Q ss_pred HHHHHHHH----hcCCCCEEEEcCCCCCC----hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCC
Q 014172 167 SILQAVLA----VCSPGDEVIIPAPFWVS----YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPS 238 (429)
Q Consensus 167 al~~~l~~----l~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~ 238 (429)
+++.++.+ ++++||+|+++++.|++ +...++..|++++.++++. ++.+|++.+++++++++++|++++|+
T Consensus 97 ~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv~l~~~~ 174 (406)
T PRK09295 97 GINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPALFDERTRLLAITHVS 174 (406)
T ss_pred HHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCCCHHHHHHhcCCCcEEEEEecch
Confidence 99988876 46899999999988865 3456677899999999864 35589999999999999999999999
Q ss_pred CCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCH
Q 014172 239 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK 318 (429)
Q Consensus 239 NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~ 318 (429)
||||.++| +++|.++|+++ |+++++|++|... ..+..+.. .+..+++.|++|.+|.+| +||+++++
T Consensus 175 n~tG~~~~---~~~i~~~~~~~-~~~vivD~a~~~g----~~~~~~~~----~~~D~~~~s~~K~~gp~G--~G~l~~~~ 240 (406)
T PRK09295 175 NVLGTENP---LAEMIALAHQH-GAKVLVDGAQAVM----HHPVDVQA----LDCDFYVFSGHKLYGPTG--IGILYVKE 240 (406)
T ss_pred hcccccCC---HHHHHHHHHHc-CCEEEEEcccccC----ccccCchh----cCCCEEEeehhhccCCCC--cEEEEEch
Confidence 99999999 88999999999 9999999999753 22222222 345689999999888666 79999998
Q ss_pred HHHHHHHHHh----------------------hcccCCCchHHHHHHHHHHhcCCCChH-HHHHHHHHHHHHHHHHHHHh
Q 014172 319 HFVAACNKIQ----------------------SQFTSGASSISQKAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSF 375 (429)
Q Consensus 319 ~~~~~l~~~~----------------------~~~~~~~~~~~q~aa~~~l~~~~~~~~-~~~~~~~~~~~~r~~l~~~L 375 (429)
++++.+.... +....+++..+..++.++++. ..+ .++...++.++.++++.+.|
T Consensus 241 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~---~~~~g~~~i~~~~~~l~~~l~~~l 317 (406)
T PRK09295 241 ALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDY---VSALGLNNIAEYEQNLMHYALSQL 317 (406)
T ss_pred HhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHH---HHHhCHHHHHHHHHHHHHHHHHHH
Confidence 8776543110 011224566666677777764 122 35677788888999999999
Q ss_pred ccCCCceeecCC--ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 376 GELEGVKMSEPQ--GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 376 ~~l~g~~~~~p~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++++|+++..|. .++ +.+.++.. +..++.+.| +++||.|
T Consensus 318 ~~~~~~~~~~~~~~~~i-v~~~~~~~------------~~~~~~~~L-~~~gI~v 358 (406)
T PRK09295 318 ESVPDLTLYGPQNRLGV-IAFNLGKH------------HAYDVGSFL-DNYGIAV 358 (406)
T ss_pred hcCCCEEEeCCCCCceE-EEEEECCc------------CHHHHHHHH-HhCCeEE
Confidence 998888887653 455 45566642 567777765 6679876
No 136
>PRK07049 methionine gamma-lyase; Validated
Probab=99.95 E-value=1.6e-26 Score=231.35 Aligned_cols=226 Identities=14% Similarity=0.202 Sum_probs=181.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHH----HHcCC
Q 014172 126 TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADA 201 (429)
Q Consensus 126 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~ 201 (429)
.+| +++....|++.||++.. .+++++++|+++++..++.+++++||.|+++.|+|..|...+ ...|+
T Consensus 78 ~R~-~~Pt~~~Le~~lA~leg--------~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi 148 (427)
T PRK07049 78 SRF-NHPNSEIVEDRLAVYEG--------AESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGV 148 (427)
T ss_pred cCC-CCcCHHHHHHHHHHHhC--------CCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCc
Confidence 456 45566899999999862 457888999999999999999999999999999999997654 56799
Q ss_pred EEEEecCCCCCCCCCCHHHHHhhcc-----cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHh---CCCeEEEEccCCcc
Q 014172 202 TPVILPTRISENFLLDPKVLESKLT-----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK---HPRLLVLSDEIYEH 273 (429)
Q Consensus 202 ~~~~v~~~~~~~~~~d~e~l~~~l~-----~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~---~~~i~vi~Deay~~ 273 (429)
+++.++. . .|++.+++.+. +++|+|++++|+||||.+++.+++.+|++.|+. + +++||+||+|..
T Consensus 149 ~~v~~~~---~---~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~-~~~vvvDety~~ 221 (427)
T PRK07049 149 GAVGFAD---G---LSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGH-RPIIACDNTLLG 221 (427)
T ss_pred EEEEEeC---C---CCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccC-CCEEEEECCccc
Confidence 8777762 1 46777776663 478999999999999999998888888877643 6 899999999875
Q ss_pred cccCCCCCCccccCCCCCCceEEEeccChhcc-cccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCC
Q 014172 274 IIYAPATHTSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYA 352 (429)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~ 352 (429)
..+. .++ ..+..|++.||||.++ ++|+|+||+++++++++.+......++.+.+.+.+.++...|+.
T Consensus 222 ~~~~----~pl-----~~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~t--- 289 (427)
T PRK07049 222 PVFQ----KPL-----EHGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRSAIGTQLDPHSCWMLGRSLET--- 289 (427)
T ss_pred cccC----Ccc-----ccCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCh---
Confidence 4321 111 1245699999999998 69999999999999999999888878888899988877666642
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhccCCCcee
Q 014172 353 GGEVVSKMVKAFRERRDFLVKSFGELEGVKM 383 (429)
Q Consensus 353 ~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~ 383 (429)
+....++..++++.+.+.|++.|+++.
T Consensus 290 ----l~~R~~~~~~~a~~la~~L~~~p~V~~ 316 (427)
T PRK07049 290 ----LVLRMERANRNARAVAEFLRDHPKVEK 316 (427)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHhCCCccE
Confidence 455566778899999999999887653
No 137
>PRK07179 hypothetical protein; Provisional
Probab=99.95 E-value=3.3e-26 Score=229.21 Aligned_cols=294 Identities=19% Similarity=0.210 Sum_probs=210.0
Q ss_pred cCCCeEEcCCCC-CCCCChHHHHHHHHHHHHcC---C--C-CCC-CCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecCh
Q 014172 93 AGVSVIRLAAGE-PDFDTPVLIAEAGINAIREG---F--T-RYT-PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGA 164 (429)
Q Consensus 93 ~g~~~i~L~~g~-~~~~~p~~v~~a~~~~~~~~---~--~-~Y~-~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~ 164 (429)
.|..+++++.++ -++...|++++++.+++.+. . . .|. ......+|++.+++++ | .+.+++++|+
T Consensus 52 ~g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~----g----~~~~~~~~sG 123 (407)
T PRK07179 52 PGPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFT----G----FESCLLCQSG 123 (407)
T ss_pred CCCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHh----C----CCcEEEECCH
Confidence 566789998876 77777899999999988642 1 1 111 1112345666666654 4 2467889999
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-CCcEEEEcCCCCCccC
Q 014172 165 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGS 243 (429)
Q Consensus 165 ~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~p~NPtG~ 243 (429)
++++..++++++.+||.|+++.+.|.+....++..|++++.++. .|++.+++++++ ++++|++++++||||.
T Consensus 124 ~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~lV~v~~v~n~tG~ 196 (407)
T PRK07179 124 WAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-------NDVDHLRRQIERHGPGIIVVDSVYSTTGT 196 (407)
T ss_pred HHHHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCCCCc
Confidence 99999999999999999999999999888888889998877653 489999999876 5788889999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHH
Q 014172 244 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA 323 (429)
Q Consensus 244 ~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~ 323 (429)
+++ +++|.++|++| |+++|+||+|....++......+..++.....++++.|+||.+| .|+||+++++++++.
T Consensus 197 i~p---l~~I~~l~~~~-~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g---~~~G~l~~~~~~~~~ 269 (407)
T PRK07179 197 IAP---LADIVDIAEEF-GCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA---GRAGIITCPRELAEY 269 (407)
T ss_pred ccc---HHHHHHHHHHc-CCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh---ccCeEEEeCHHHHHH
Confidence 999 88999999999 99999999998654433222222222211223588999999996 368999999998887
Q ss_pred HHHHhhc--ccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccC
Q 014172 324 CNKIQSQ--FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG 401 (429)
Q Consensus 324 l~~~~~~--~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~ 401 (429)
+...... +..+.+.....++.++++. .+.....+++++++++++.+.|+++ |+++. +.+ .++++.++..
T Consensus 270 ~~~~~~~~~~~~t~~~~~~aa~~aal~~----~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~-~~~-~i~~l~~~~~-- 340 (407)
T PRK07179 270 VPFVSYPAIFSSTLLPHEIAGLEATLEV----IESADDRRARLHANARFLREGLSEL-GYNIR-SES-QIIALETGSE-- 340 (407)
T ss_pred HHHhCcCeeeCCCCCHHHHHHHHHHHHH----HhcCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCC-CEEEEEeCCH--
Confidence 7654332 2222233333334455553 2223467788999999999999988 88765 444 4467776531
Q ss_pred CcccCCCCCCChHHHHHHHHHhCCee
Q 014172 402 SEAEGFGKIENSESLCRYLLDKAQVL 427 (429)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~Ll~~~gV~ 427 (429)
.+...+.+.|.++ ||.
T Consensus 341 ---------~~~~~~~~~L~~~-GI~ 356 (407)
T PRK07179 341 ---------RNTEVLRDALEER-NVF 356 (407)
T ss_pred ---------HHHHHHHHHHHHC-Cce
Confidence 1345666676654 886
No 138
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.95 E-value=2.8e-26 Score=229.44 Aligned_cols=300 Identities=17% Similarity=0.181 Sum_probs=210.5
Q ss_pred CCCeEEcCCCC-CCCCChHHHHHHHHHHHHcCCCCCC---CCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 94 GVSVIRLAAGE-PDFDTPVLIAEAGINAIREGFTRYT---PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 94 g~~~i~L~~g~-~~~~~p~~v~~a~~~~~~~~~~~Y~---~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
|+++++|+.++ ..+..+|++++++.+++++.....+ ...|..+....+++.+.+..| .+ ..++++++++++.
T Consensus 44 ~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g---~~-~~l~~~sG~~an~ 119 (402)
T TIGR01821 44 AKDVTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG---KE-SALVFTSGYVAND 119 (402)
T ss_pred CeeEEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC---CC-eEEEECchHHHHH
Confidence 36789998887 8888899999999999875222110 012333333444444444444 23 4555555677888
Q ss_pred HHHHHhcC--CCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc---c-CCcEEEEcCCCCCccC
Q 014172 170 QAVLAVCS--PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT---E-KSRLLILCSPSNPTGS 243 (429)
Q Consensus 170 ~~l~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~---~-~~~~i~l~~p~NPtG~ 243 (429)
.++..+.. +|+.|+.....|......++..|+++..++. .|++++++.++ + ++++|++++|+||+|.
T Consensus 120 ~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~ 192 (402)
T TIGR01821 120 ATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGD 192 (402)
T ss_pred HHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCC
Confidence 88888765 6787877767777777778888988766653 26677776664 2 5789999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHH
Q 014172 244 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA 323 (429)
Q Consensus 244 ~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~ 323 (429)
+.+ +++|.++|++| |+++|+||+|....++...........-..+.+++++||||.+|++| ||+++++++++.
T Consensus 193 ~~~---l~~i~~l~~~~-~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~~~~~~~ 265 (402)
T TIGR01821 193 IAP---IEEICDLADKY-GALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAASRKLIDA 265 (402)
T ss_pred ccC---HHHHHHHHHHc-CCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecCHHHHHH
Confidence 999 89999999999 99999999999555543221111111111234688999999999888 999999999998
Q ss_pred HHHHhhc--ccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccC
Q 014172 324 CNKIQSQ--FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG 401 (429)
Q Consensus 324 l~~~~~~--~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~ 401 (429)
+...... ++.+.+...+.++.++|+. .++. ...++.++++++++.+.|+++ |+++.++.+++ +++.++..
T Consensus 266 l~~~~~~~~~t~~~~~~~~aaa~aaL~~---~~~~-~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~i-~~i~~~~~-- 337 (402)
T TIGR01821 266 IRSYAPGFIFTTSLPPAIAAGATASIRH---LKES-QDLRRAHQENVKRLKNLLEAL-GIPVIPNPSHI-VPVIIGDA-- 337 (402)
T ss_pred HHHhCcCceecCcCCHHHHHHHHHHHHH---hhcC-HHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCE-EEEEeCCH--
Confidence 8765443 2345677778888888875 2222 455666778999999999988 88877777665 55665421
Q ss_pred CcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 402 SEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
....+++++|++++||.+
T Consensus 338 ---------~~a~~~~~~L~~~~Gi~v 355 (402)
T TIGR01821 338 ---------ALCKKVSDLLLNKHGIYV 355 (402)
T ss_pred ---------HHHHHHHHHHHhcCCEEE
Confidence 135789999988779876
No 139
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.95 E-value=4.2e-26 Score=229.70 Aligned_cols=299 Identities=19% Similarity=0.227 Sum_probs=214.5
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCC--CC-------CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecCh
Q 014172 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYT--PN-------AGTLELRSAICHKLKEENGLSYTPDQILVSNGA 164 (429)
Q Consensus 94 g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~--~~-------~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~ 164 (429)
|.+.|.|+.+... ++|+.+.+++.+.+.+...+.. .. ....++|+.++++++ .+ ++++|++|+|+
T Consensus 30 ~~~~iyLd~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~----~~-~~~~v~~t~g~ 103 (424)
T PLN02855 30 GSKLVYLDNAATS-QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFIN----AS-TSREIVFTRNA 103 (424)
T ss_pred CCCeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcC----CC-CCCEEEEeCCH
Confidence 3468999998876 5678899998887654211110 00 112467777777764 21 35799999999
Q ss_pred HHHHHHHHHH----hcCCCCEEEEcCCCCCC----hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcC
Q 014172 165 KQSILQAVLA----VCSPGDEVIIPAPFWVS----YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS 236 (429)
Q Consensus 165 ~~al~~~l~~----l~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~ 236 (429)
++++..+++. .+++||+|+++.+.|++ +...++..|++++.++++.+ +.+|++.+++.+++++++|++++
T Consensus 104 t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~--~~~~~~~l~~~i~~~t~lv~i~~ 181 (424)
T PLN02855 104 TEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPD--EVLDVEQLKELLSEKTKLVATHH 181 (424)
T ss_pred HHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCC--CCcCHHHHHHHhccCceEEEEeC
Confidence 9999998876 36899999999998875 44556778999999998643 34899999999999999999999
Q ss_pred CCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEc
Q 014172 237 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG 316 (429)
Q Consensus 237 p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~ 316 (429)
++||||.++| +++|+++|+++ |+++|+|++|.. +..+..+.. .+..+++.|++|.+|.+| +||+++
T Consensus 182 ~~n~tG~~~~---~~~I~~l~~~~-g~~vivD~a~~~----g~~~~~~~~----~~~d~~~~s~~K~~gp~G--~G~l~~ 247 (424)
T PLN02855 182 VSNVLGSILP---VEDIVHWAHAV-GAKVLVDACQSV----PHMPVDVQT----LGADFLVASSHKMCGPTG--IGFLWG 247 (424)
T ss_pred ccccccccCC---HHHHHHHHHHc-CCEEEEEhhhhc----CCcCCCchh----cCCCEEEeecccccCCCc--cEEEEE
Confidence 9999999999 88999999999 999999999964 222222222 344588999999877555 899999
Q ss_pred CHHHHHHHHHHh--------------------hcccCC-CchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHh
Q 014172 317 PKHFVAACNKIQ--------------------SQFTSG-ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSF 375 (429)
Q Consensus 317 ~~~~~~~l~~~~--------------------~~~~~~-~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L 375 (429)
++++++.+.... ..+..+ ++.....++.++++.- .+..+++..++.++.++.+.+.|
T Consensus 248 ~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~--~~~g~~~i~~~~~~l~~~l~~~L 325 (424)
T PLN02855 248 KSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYL--SEIGMDRIHEYEVELGTYLYEKL 325 (424)
T ss_pred chhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHHH
Confidence 988877653221 011222 3333344444555420 12356777888888999999999
Q ss_pred ccCCCceeecCCc------eEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 376 GELEGVKMSEPQG------AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 376 ~~l~g~~~~~p~~------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++++|+++..+.. +.++.+.+++. +..++.+.|.+++||.+
T Consensus 326 ~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~------------~~~~v~~~L~~~~gI~v 372 (424)
T PLN02855 326 SSVPGVRIYGPKPSEGVGRAALCAFNVEGI------------HPTDLSTFLDQQHGVAI 372 (424)
T ss_pred hcCCCEEEeCCCcccccCcccEEEEEECCc------------CHHHHHHHhcccCCEEE
Confidence 9988988874321 23466777642 56788888877668865
No 140
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.95 E-value=7.3e-26 Score=226.82 Aligned_cols=295 Identities=20% Similarity=0.231 Sum_probs=208.6
Q ss_pred CCCeEEcCCCC-CCCCChHHHHHHHHHHHHcCCCC-------CCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChH
Q 014172 94 GVSVIRLAAGE-PDFDTPVLIAEAGINAIREGFTR-------YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAK 165 (429)
Q Consensus 94 g~~~i~L~~g~-~~~~~p~~v~~a~~~~~~~~~~~-------Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~ 165 (429)
|+++++|+.++ ..++.+|++.+++.+.+.+.... |++.....+|++.++++ +| .++.+++++| .
T Consensus 45 ~~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~----~g---~~~~~~~~sG-~ 116 (407)
T PRK09064 45 EREVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADL----HG---KEAALVFTSG-Y 116 (407)
T ss_pred CceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHH----hC---CCcEEEECcH-H
Confidence 46789998887 78888899999999988653221 22222234455555554 44 2445555555 4
Q ss_pred HHHHHHHHHhcC--CCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc----cCCcEEEEcCCCC
Q 014172 166 QSILQAVLAVCS--PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSN 239 (429)
Q Consensus 166 ~al~~~l~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~----~~~~~i~l~~p~N 239 (429)
++...++..++. +++.|+.....|.+....++..|+++..++. .|++.+++.++ +++++|++++++|
T Consensus 117 ~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~v~s 189 (407)
T PRK09064 117 VSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLIAFESVYS 189 (407)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEEEEeCCCC
Confidence 566656776654 7777777777777777778888888766653 26777777764 4678999999999
Q ss_pred CccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCC-CCCceEEEeccChhcccccceeeEEEcCH
Q 014172 240 PTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG-MWERTLTVNGFSKAFAMTGWRLGYIAGPK 318 (429)
Q Consensus 240 PtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~~~G~R~G~v~~~~ 318 (429)
|+|.+.+ +++|.++|++| |+++|+||+|....|+.... .+....+ ..+.+++++||||.||++| ||+++++
T Consensus 190 ~~G~~~~---l~~i~~l~~~~-~~~livDEa~~~G~~g~~g~-g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~~~ 261 (407)
T PRK09064 190 MDGDIAP---IAEICDLADKY-NALTYLDEVHAVGMYGPRGG-GIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAGSA 261 (407)
T ss_pred CCccccC---HHHHHHHHHHc-CCEEEEECCCcccccCCCCC-ChHHhcCCCCCCeEEEEecchhhhccC---ceEecCH
Confidence 9999999 99999999999 99999999998544543221 1222211 1234788999999999888 9999999
Q ss_pred HHHHHHHHHhhcc--cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEec
Q 014172 319 HFVAACNKIQSQF--TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDF 396 (429)
Q Consensus 319 ~~~~~l~~~~~~~--~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l 396 (429)
++++.+......+ +.+.+...+.++.++++. .++ ....+++++++++++.+.|+++ |+++..+.+++ +++.+
T Consensus 262 ~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~---~~~-~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~i-v~i~~ 335 (407)
T PRK09064 262 ALVDAVRSYAPGFIFTTSLPPAIAAAALASIRH---LKE-SNEERERHQERAAKLKAALDAA-GIPVMPNESHI-VPVMV 335 (407)
T ss_pred HHHHHHHHhCccccccCcCCHHHHHHHHHHHHH---Hhc-CHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCE-EEEEe
Confidence 9998887654433 334566677777777764 122 2345678889999999999987 88777666554 66766
Q ss_pred CCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 397 STYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.. ....+++++|+++.||.|
T Consensus 336 ~~~-----------~~~~~l~~~L~~~~gi~v 356 (407)
T PRK09064 336 GDP-----------EKCKKASDMLLEEHGIYV 356 (407)
T ss_pred CCH-----------HHHHHHHHHHHHhCCEEE
Confidence 431 146789999988779876
No 141
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.95 E-value=9.3e-26 Score=225.35 Aligned_cols=299 Identities=17% Similarity=0.144 Sum_probs=207.4
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcCC----CCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHH
Q 014172 97 VIRLAAGEPDFDTPVLIAEAGINAIREGF----TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 172 (429)
Q Consensus 97 ~i~L~~g~~~~~~p~~v~~a~~~~~~~~~----~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l 172 (429)
.+.|+.+-+.. +|+.+++++.+.+.... ..|....+..++.+.+.+.+.+.+| .++++|++++|+++++..++
T Consensus 18 ~~yl~~~~~~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~--~~~~~v~~~~~~t~~l~~~~ 94 (397)
T TIGR01976 18 RVFFDNPAGTQ-IPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLN--ADPPEVVFGANATSLTFLLS 94 (397)
T ss_pred eEEecCCccCC-CCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcC--CCCCeEEEeCCHHHHHHHHH
Confidence 68888777663 57888999988875422 1243333333333444444444445 34557999999999998777
Q ss_pred HHh---cCCCCEEEEcCCCCCChH----HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCC
Q 014172 173 LAV---CSPGDEVIIPAPFWVSYP----EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVY 245 (429)
Q Consensus 173 ~~l---~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~ 245 (429)
.++ +++||+|++++|.|.+.. ..++..|++++.++++.+ ++.+|++++++.+++++++|++++|+||||.++
T Consensus 95 ~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~ 173 (397)
T TIGR01976 95 RAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEA-TGELHPDDLASLLSPRTRLVAVTAASNTLGSIV 173 (397)
T ss_pred HHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecccc-CCCcCHHHHHHhcCCCceEEEEeCCCCCCCccC
Confidence 775 689999999999887643 456778999999998643 366899999999998999999999999999999
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHH
Q 014172 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN 325 (429)
Q Consensus 246 ~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~ 325 (429)
+ +++|.++|++| |+++|+|+++.. +.....+.. .+..+++.|++|.+| +|+||+++++++++.+.
T Consensus 174 ~---~~~i~~~~~~~-~~~~ivD~a~~~----~~~~~~~~~----~~~d~~~~s~~K~~g---~~~G~l~~~~~~~~~l~ 238 (397)
T TIGR01976 174 D---LAAITELVHAA-GALVVVDAVHYA----PHGLIDVQA----TGADFLTCSAYKFFG---PHMGILWGRPELLMNLP 238 (397)
T ss_pred C---HHHHHHHHHHc-CCEEEEehhhhc----cccCCCHHH----cCCCEEEEechhhcC---CceEEEEEcHHHHhhCC
Confidence 9 99999999999 999999999753 222222221 345577899999875 57999999999887765
Q ss_pred HHhhccc----------CCCchHHHH---HHHHHHhcCCCC---------hHHHHHHHHHHHHHHHHHHHHhccCCCcee
Q 014172 326 KIQSQFT----------SGASSISQK---AGVAALGLGYAG---------GEVVSKMVKAFRERRDFLVKSFGELEGVKM 383 (429)
Q Consensus 326 ~~~~~~~----------~~~~~~~q~---aa~~~l~~~~~~---------~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~ 383 (429)
.....+. .+++..... ++...+...... .+++++..++..+.++++.+.|++++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~ 318 (397)
T TIGR01976 239 PYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTL 318 (397)
T ss_pred CccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 4322111 112222222 333333221000 012566677778888999999998867888
Q ss_pred ecC-----CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 384 SEP-----QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 384 ~~p-----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
..+ .++ ++.+.+++. +..++.++|.++ ||.|
T Consensus 319 ~~~~~~~~~~~-~~~~~~~~~------------~~~~l~~~L~~~-gI~v 354 (397)
T TIGR01976 319 YGVARLAARVP-TVSFTVHGL------------PPQRVVRRLADQ-GIDA 354 (397)
T ss_pred eCCCCccCCCc-eEEEEeCCc------------CHHHHHHHHHHC-CeEE
Confidence 654 444 466666532 577899988665 8876
No 142
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.95 E-value=9.4e-26 Score=228.66 Aligned_cols=304 Identities=20% Similarity=0.280 Sum_probs=215.9
Q ss_pred HHHHHHHHHHhcC----CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCC--CCHHHHHHHH---HHHHhhcCCC
Q 014172 82 AITDQATALAQAG----VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNA--GTLELRSAIC---HKLKEENGLS 152 (429)
Q Consensus 82 ~~~~~~~~~~~~g----~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~--G~~~lr~~ia---~~l~~~~g~~ 152 (429)
++.+...++.... ...+.|+.|.+++.+|..+.+..... .....|.+.. -...++++++ +++.+.+|.
T Consensus 51 ~v~~~~~~~~~~~~~~~~~~~~lg~g~~~~~~p~~~~~~~~~~--~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~- 127 (447)
T PRK00451 51 ELLRHLRELAAKNKTAEEYPSFLGAGAYDHYIPAVVDHIISRS--EFYTAYTPYQPEISQGTLQAIFEYQTMICELTGM- 127 (447)
T ss_pred HHHHHHHHHHhcCCCcCcCcccCcccccCCcCcHHHHHHHhch--hHHHhcCCCCCccchHHHHHHHHHHHHHHHHhCC-
Confidence 4444444444322 15788999999988887776665443 2223455511 1234666666 455777784
Q ss_pred CCCCcEEEecChHHHHHHHHHHhc-CCCCEEEEcCCCCCChHHHHHH----cCCEEEEecCCCCCCCCCCHHHHHhhccc
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVC-SPGDEVIIPAPFWVSYPEMARI----ADATPVILPTRISENFLLDPKVLESKLTE 227 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~-~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~e~l~~~l~~ 227 (429)
+++++++|+|+++++..++.++. .+||+|+++++.|+.+...++. .|++++.+++++ + .+|++++++++++
T Consensus 128 -~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~--~-~~d~~~l~~~i~~ 203 (447)
T PRK00451 128 -DVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYED--G-VTDLEALEAAVDD 203 (447)
T ss_pred -CcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCC--C-CCCHHHHHHhcCC
Confidence 55689999999999998888874 7999999999999998877664 699999999864 3 6899999999999
Q ss_pred CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEE--ccCCcccccCCCCCCccccCCCCCCceEEEe---ccCh
Q 014172 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS--DEIYEHIIYAPATHTSFASLPGMWERTLTVN---GFSK 302 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~--Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~---S~SK 302 (429)
++++|++++| ||||.+.+ +++|.++|+++ |+++++ |..... ... .+...+.+++++ +|||
T Consensus 204 ~t~~v~l~~p-n~tG~v~~---l~~I~~~a~~~-~~~~iv~~d~~~~g-----~~~-----~~~~~~~D~~~~s~~k~~~ 268 (447)
T PRK00451 204 DTAAVVVQYP-NFFGVIED---LEEIAEIAHAG-GALFIVGVDPVSLG-----LLK-----PPGEYGADIVVGEGQPLGI 268 (447)
T ss_pred CeEEEEEECC-CCCCeeCC---HHHHHHHHHHC-CCEEEEEcChHHhc-----cCC-----CcccCCCCEEEECCCcCCC
Confidence 9999999999 89999988 99999999999 999887 433211 100 112245556666 7888
Q ss_pred hcccccceeeEEEcCHHHHHHH----------------------------HHHhhcccCCCchHHH-HHHHHHHhcCCCC
Q 014172 303 AFAMTGWRLGYIAGPKHFVAAC----------------------------NKIQSQFTSGASSISQ-KAGVAALGLGYAG 353 (429)
Q Consensus 303 ~~~~~G~R~G~v~~~~~~~~~l----------------------------~~~~~~~~~~~~~~~q-~aa~~~l~~~~~~ 353 (429)
.++++|+|+||+++++++++.+ +......+.+.+...+ .++..++... .
T Consensus 269 ~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~--~ 346 (447)
T PRK00451 269 PLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLL--G 346 (447)
T ss_pred CCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHH--C
Confidence 8888999999999999888773 1111122222333333 3333334321 3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEE--EecCCccCCcccCCCCCCChHHHHHHHHHhC
Q 014172 354 GEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLF--IDFSTYYGSEAEGFGKIENSESLCRYLLDKA 424 (429)
Q Consensus 354 ~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~ 424 (429)
+++++++.+++.++++++.++|++++|+++. ++++|.+ ++++ .+..+++++|++++
T Consensus 347 ~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~~~~~~~~v~~~-------------~~~~~~~~~L~~~g 404 (447)
T PRK00451 347 PEGLRELAEQNHQKAHYLAERLAEIGGVELF--DGPFFNEFVVRLP-------------KPAEEVNEALLEKG 404 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCEEec--CCCeEEEEEEecC-------------CCHHHHHHHHHhcC
Confidence 5778999999999999999999998788875 4556655 4443 15689999998873
No 143
>PLN02242 methionine gamma-lyase
Probab=99.95 E-value=3.8e-26 Score=227.79 Aligned_cols=222 Identities=21% Similarity=0.279 Sum_probs=179.0
Q ss_pred CCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHH-----HHcCCEEE
Q 014172 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA-----RIADATPV 204 (429)
Q Consensus 130 ~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~-----~~~g~~~~ 204 (429)
+++...+|++.+|+++ ..+.+++++|+++++..++.+++++||+|+++.|.|..+...+ +..|++++
T Consensus 74 ~~Pt~~~LE~~lA~l~--------g~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~ 145 (418)
T PLN02242 74 FNPTVLNLGRQMAALE--------GTEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTT 145 (418)
T ss_pred CChhHHHHHHHHHHHh--------CCCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEE
Confidence 3455677888888875 2356789999999999999999999999999999998887654 35788887
Q ss_pred EecCCCCCCCCCCHHHHHhhccc-CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCc
Q 014172 205 ILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS 283 (429)
Q Consensus 205 ~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~ 283 (429)
.++. .|++.+++++++ ++|+|++++|+||||.+++ +++|+++|++| +++||+|++|..+.+..
T Consensus 146 ~~d~-------~d~e~l~~~i~~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~-gi~livDea~~~~~~~~----- 209 (418)
T PLN02242 146 FVDI-------TDLEAVKKAVVPGKTKVLYFESISNPTLTVAD---IPELARIAHEK-GVTVVVDNTFAPMVLSP----- 209 (418)
T ss_pred EcCC-------CCHHHHHHhcCcCCCEEEEEecCCCCCCcccC---HHHHHHHHHHh-CCEEEEECCCCccCCCH-----
Confidence 7764 289999999988 5999999999999999998 89999999999 99999999998765421
Q ss_pred cccCCCCCCceEEEeccChhcccccce-eeEEEcCHHHHHHHHHHhhc--ccCCCchHHHHHHHHHHhcCCCChHHHHHH
Q 014172 284 FASLPGMWERTLTVNGFSKAFAMTGWR-LGYIAGPKHFVAACNKIQSQ--FTSGASSISQKAGVAALGLGYAGGEVVSKM 360 (429)
Q Consensus 284 ~~~~~~~~~~~i~~~S~SK~~~~~G~R-~G~v~~~~~~~~~l~~~~~~--~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~ 360 (429)
.. .+.+|++.||||.++++|++ .||+++++++++.+...... ...+.....|.+...++.. ..+..+
T Consensus 210 -~~----~g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l-----~tl~~r 279 (418)
T PLN02242 210 -AR----LGADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGALMLLGPTMNPKVAFELSERL-----PHLSLR 279 (418)
T ss_pred -HH----cCCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCC-----CcHHHH
Confidence 11 24569999999999989988 59999999999988876442 3445666677777766653 255667
Q ss_pred HHHHHHHHHHHHHHhccCCCceeecC
Q 014172 361 VKAFRERRDFLVKSFGELEGVKMSEP 386 (429)
Q Consensus 361 ~~~~~~~r~~l~~~L~~l~g~~~~~p 386 (429)
+++++++++.+.+.|+++ ++++..|
T Consensus 280 ~~~~~~~a~~la~~L~~~-~~~V~yP 304 (418)
T PLN02242 280 MKEHCRRAMEYAKRMKEL-GLKVIYP 304 (418)
T ss_pred HHHHHHHHHHHHHHHHhC-CCEEECC
Confidence 789999999999999998 5666533
No 144
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.95 E-value=1.9e-25 Score=222.45 Aligned_cols=305 Identities=15% Similarity=0.162 Sum_probs=211.2
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..+|+..|. ..++. +|.+.+++.+++.+... .+. ....+....+++.+.+.. ..++|++++|+++++.
T Consensus 29 dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~-~~~-~~~~~~~~~la~~l~~~~----~~~~v~~~~sGseA~~ 102 (389)
T PRK01278 29 DGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWH-VSN-LYRIPEQERLAERLVENS----FADKVFFTNSGAEAVE 102 (389)
T ss_pred CCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCc-ccc-ccCChHHHHHHHHHHhhC----CCCEEEEcCCcHHHHH
Confidence 577899998875 23333 78999999998875221 111 122345556666665543 2468999999999999
Q ss_pred HHHHHh----cCCCC----EEEEcCCCCCChHHHHHHcCCEEEEecCC-C-CCCCC----CCHHHHHhhcccCCcEEEEc
Q 014172 170 QAVLAV----CSPGD----EVIIPAPFWVSYPEMARIADATPVILPTR-I-SENFL----LDPKVLESKLTEKSRLLILC 235 (429)
Q Consensus 170 ~~l~~l----~~~gd----~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~-~-~~~~~----~d~e~l~~~l~~~~~~i~l~ 235 (429)
.++++. .++|| +|++.+++|+++...+...+......... + ..++. .|++.+++.+++++++|+++
T Consensus 103 ~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~avive 182 (389)
T PRK01278 103 CAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNTAAILIE 182 (389)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCeEEEEEe
Confidence 998876 45676 89999999999887776665543332110 0 11222 58999999998889999998
Q ss_pred CCCCCcc-CCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEE
Q 014172 236 SPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYI 314 (429)
Q Consensus 236 ~p~NPtG-~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v 314 (429)
.++||+| .+++.+.+++|.++|++| |+++|+||+|.++.+.+... ..... +.. .-+.||||.++ +|+|+||+
T Consensus 183 p~~~~~G~~~~~~~~l~~l~~l~~~~-g~~lI~DEv~~g~g~~g~~~-~~~~~-~~~---pdi~t~sK~l~-~G~~ig~~ 255 (389)
T PRK01278 183 PIQGEGGIRPAPDEFLKGLRQLCDEN-GLLLIFDEVQCGMGRTGKLF-AHEWA-GVT---PDIMAVAKGIG-GGFPLGAC 255 (389)
T ss_pred cccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCCcce-eeccc-CCC---CCEEEEehhcc-CCcceEEE
Confidence 8889999 788999999999999999 99999999999876554311 11111 111 11568999999 99999999
Q ss_pred EcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCC--ChHHHHHHHHHHHHHHHHHHHHhccCCC-ceeecCCceEE
Q 014172 315 AGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYA--GGEVVSKMVKAFRERRDFLVKSFGELEG-VKMSEPQGAFY 391 (429)
Q Consensus 315 ~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~--~~~~~~~~~~~~~~~r~~l~~~L~~l~g-~~~~~p~~~~~ 391 (429)
++++++++.+.......+++.+.+.|.++.++|+.-.. ..+++.++.+.++++++.+.+ ..++ +..+.+ .|++
T Consensus 256 ~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l~~---~~~~~~~~v~g-~G~~ 331 (389)
T PRK01278 256 LATEEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLVD---RFPDVIEEVRG-KGLL 331 (389)
T ss_pred EEcHHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHh---hCCCceeeEec-ccEE
Confidence 99999988887666667778899999999888864100 012233344444444443322 2332 333445 4566
Q ss_pred EEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 392 LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 392 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++++++. ++.+|+++|+++ ||.+
T Consensus 332 ~~i~~~~-------------~~~~~~~~l~~~-GV~~ 354 (389)
T PRK01278 332 LGLKCVV-------------PNRDLVQALRDE-GLLT 354 (389)
T ss_pred EEEEEec-------------CHHHHHHHHHHC-CeEE
Confidence 7787742 578999999988 8875
No 145
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.95 E-value=7.4e-26 Score=225.25 Aligned_cols=245 Identities=14% Similarity=0.199 Sum_probs=182.1
Q ss_pred CCCCCCChHHHHHHHHHH-----H-HcCCCCCC--CCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHH
Q 014172 103 GEPDFDTPVLIAEAGINA-----I-REGFTRYT--PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (429)
Q Consensus 103 g~~~~~~p~~v~~a~~~~-----~-~~~~~~Y~--~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 174 (429)
..|.++++..+.++..+. . ..++ .|+ ++++..+|+++++++++ .+++++++|+++++..++.+
T Consensus 28 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~r~~~p~~~~Le~~iA~~~g--------~~~~l~~~sG~~Ai~~al~~ 98 (400)
T PRK06234 28 ATPIYQTSTFIFDSAEQGGRRFAGEESGY-IYSRLGNPTSTEVENKLALLEG--------GEAAVVAASGMGAISSSLWS 98 (400)
T ss_pred cCCcccccceecCChHHHHHhhccCcCCC-cccCCCCccHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHH
Confidence 345666655544444331 1 1222 255 77888999999999974 24678999999999999999
Q ss_pred hcCCCCEEEEcCCCCCChHH----HHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHH
Q 014172 175 VCSPGDEVIIPAPFWVSYPE----MARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLL 250 (429)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l 250 (429)
++++||+|+++.|.|..+.. .++..|++++.++.. |++++++++++++++|++++|+||||.+.+ +
T Consensus 99 ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~-------d~e~l~~~i~~~tklI~iesP~NPtG~v~d---l 168 (400)
T PRK06234 99 ALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTS-------NLEEVRNALKANTKVVYLETPANPTLKVTD---I 168 (400)
T ss_pred HhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCC-------CHHHHHHHhccCCeEEEEECCCCCCCCcCC---H
Confidence 99999999999999987654 347789999999752 899999999999999999999999999999 8
Q ss_pred HHHHHHHHhC-CCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccccccee-eEEEcCHHHHHHHHHH-
Q 014172 251 DEIARIVAKH-PRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVAACNKI- 327 (429)
Q Consensus 251 ~~I~~~a~~~-~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~-G~v~~~~~~~~~l~~~- 327 (429)
++|.++|+++ +++++|+|++|....+.. ++ . .+..+++.|+||.++++|+|+ ||+++++++++.++..
T Consensus 169 ~~I~~la~~~~~~i~livDea~~~~~~~~----~l-~----~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~ 239 (400)
T PRK06234 169 KAISNIAHENNKECLVFVDNTFCTPYIQR----PL-Q----LGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFG 239 (400)
T ss_pred HHHHHHHHhcCCCCEEEEECCCCchhcCC----ch-h----hCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHH
Confidence 8999999985 279999999998754321 11 1 245699999999999899876 9999999988887643
Q ss_pred -hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCce
Q 014172 328 -QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK 382 (429)
Q Consensus 328 -~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~ 382 (429)
....+.+.+.+....+...|+. +..+.++..++...+.+.|++.|.+.
T Consensus 240 ~~~~~g~~l~p~~a~l~~~~l~t-------l~~r~~~~~~na~~~a~~L~~~~~V~ 288 (400)
T PRK06234 240 IKDMTGSVIGPFEAFLIIRGMKT-------LQIRMEKHCKNAMKVAKFLESHPAVE 288 (400)
T ss_pred HHHhcCCCCCHHHHHHHHhccCc-------HHHHHHHHHHHHHHHHHHHHcCCCee
Confidence 2234455566655544444432 34455555667777888888765553
No 146
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.95 E-value=1e-25 Score=225.07 Aligned_cols=296 Identities=15% Similarity=0.112 Sum_probs=212.1
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCC---CCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGF---TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~---~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~ 166 (429)
.|++.||+..|. +.++. ++.+.+++.+++++.. ..|... ...++++++.+.+|.. .+++|++++|+++
T Consensus 41 dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~-----~~~~la~~l~~~~~~~-~~~~v~~~~sgse 114 (398)
T PRK03244 41 DGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFATE-----PQIALAERLVELLGAP-EGGRVFFCNSGAE 114 (398)
T ss_pred CCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccCCH-----HHHHHHHHHHHhCCCC-CCCEEEEeCchHH
Confidence 578899999875 45555 7899999999887521 235322 2245666666555532 3579999999999
Q ss_pred HHHHHHHHhcCCC-CEEEEcCCCCCChHHHHHH-cCCE------------EEEecCCCCCCCCCCHHHHHhhcccCCcEE
Q 014172 167 SILQAVLAVCSPG-DEVIIPAPFWVSYPEMARI-ADAT------------PVILPTRISENFLLDPKVLESKLTEKSRLL 232 (429)
Q Consensus 167 al~~~l~~l~~~g-d~Vlv~~p~y~~~~~~~~~-~g~~------------~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i 232 (429)
++..+++....+| +.|+..+++|+++...+.. .|.. ++.+|. .|++.+++.+.+++++|
T Consensus 115 a~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~~~~av 187 (398)
T PRK03244 115 ANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------GDVDALAAAVDDDTAAV 187 (398)
T ss_pred HHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------CCHHHHHHhhcCCeEEE
Confidence 9999999877676 5677778899887654432 2221 222221 27899999987788999
Q ss_pred EEcCCCCCccCCCCHHH-HHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccccccee
Q 014172 233 ILCSPSNPTGSVYPKNL-LDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRL 311 (429)
Q Consensus 233 ~l~~p~NPtG~~~~~~~-l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~ 311 (429)
+++.++||+|.+++.++ +++|.++|++| |+++|+||+|.++.+.|... .+. ..+.... +.+|||.++ +|+|+
T Consensus 188 iiep~~~~~G~~~~~~~~l~~l~~l~~~~-~~llI~DEv~~g~gr~g~~~-~~~-~~~~~pD---i~t~sK~l~-~G~~i 260 (398)
T PRK03244 188 FLEPIQGEAGVVPPPAGYLAAAREITDRH-GALLVLDEVQTGIGRTGAWF-AHQ-HDGVTPD---VVTLAKGLG-GGLPI 260 (398)
T ss_pred EEecccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCcccchHH-hhh-hhCCCCC---EEEEchhhh-CCccc
Confidence 99999999999997765 99999999999 99999999998865544311 111 1111112 458899999 99999
Q ss_pred eEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCc---eeecCCc
Q 014172 312 GYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV---KMSEPQG 388 (429)
Q Consensus 312 G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~---~~~~p~~ 388 (429)
||+++++++++.+.......+++.+.+++.++.++|+. ..+ .+..++.+++++++.+.|+++ +. ..+. ..
T Consensus 261 g~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~---~~~--~~~~~~~~~~~~~l~~~L~~~-~~~~~~~v~-g~ 333 (398)
T PRK03244 261 GACLAFGPAADLLTPGLHGSTFGGNPVACAAALAVLDT---IAS--EGLLENAERLGEQLRAGIEAL-GHPLVDHVR-GR 333 (398)
T ss_pred EEEEEcHHHHhhccCCCCcCCCCCCHHHHHHHHHHHHH---HHh--ccHHHHHHHHHHHHHHHHHhc-CCCceeeEe-ec
Confidence 99999999988876544555667889999999999874 111 245566777788888888875 32 2222 35
Q ss_pred eEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 389 AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 389 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|+++|+.++.. ...+++++|+++ ||.+
T Consensus 334 g~~~~i~~~~~------------~~~~~~~~l~~~-Gv~~ 360 (398)
T PRK03244 334 GLLLGIVLTAP------------VAKAVEAAAREA-GFLV 360 (398)
T ss_pred cEEEEEEEecc------------HHHHHHHHHHHC-CeEE
Confidence 67799998631 467889988876 8876
No 147
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.94 E-value=4.8e-25 Score=216.96 Aligned_cols=287 Identities=18% Similarity=0.190 Sum_probs=206.8
Q ss_pred CCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcC
Q 014172 107 FDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPA 186 (429)
Q Consensus 107 ~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~ 186 (429)
.+.|+.+.+++.+.+.. ..| + +..++.+.+.+.+.+.+|.+ .++.+++++|+++++..++.+++.+||+|+++.
T Consensus 8 ~~~~~~v~~a~~~~~~~--~~~-~--~~~~~~~~~~~~la~~~g~~-~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~ 81 (356)
T cd06451 8 SNVPPRVLKAMNRPMLG--HRS-P--EFLALMDEILEGLRYVFQTE-NGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGV 81 (356)
T ss_pred cCCCHHHHHHhCCCccC--CCC-H--HHHHHHHHHHHHHHHHhcCC-CCCEEEEecCcHHHHHHHHHHhCCCCCEEEEec
Confidence 34578888888654321 222 2 23455556666666666641 234578888899999999999999999999999
Q ss_pred CCCCC--hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCe
Q 014172 187 PFWVS--YPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL 263 (429)
Q Consensus 187 p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i 263 (429)
++|.+ +...++..|++++.+|.++ ++.+|++++++.+++ ++++|++++|+||||.+++ +++|.++|+++ |+
T Consensus 82 ~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~---~~~i~~~a~~~-~~ 155 (356)
T cd06451 82 NGVFGDRWADMAERYGADVDVVEKPW--GEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNP---LEGIGALAKKH-DA 155 (356)
T ss_pred CCchhHHHHHHHHHhCCCeEEeecCC--CCCCCHHHHHHHHhccCCCEEEEeccCCCcccccC---HHHHHHHHHhc-CC
Confidence 88765 5677888999999999864 356899999999987 8999999999999999999 88899999999 99
Q ss_pred EEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHH---Hhh-----------
Q 014172 264 LVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK---IQS----------- 329 (429)
Q Consensus 264 ~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~---~~~----------- 329 (429)
++++|++|.. |..+.++.. .+..+++.|.+|+++. +.++||++.++++++.+.. ...
T Consensus 156 ~li~D~~~~~----g~~~~~~~~----~~~d~~~~s~~K~l~~-p~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (356)
T cd06451 156 LLIVDAVSSL----GGEPFRMDE----WGVDVAYTGSQKALGA-PPGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKY 226 (356)
T ss_pred EEEEeeehhc----cCccccccc----cCccEEEecCchhccC-CCCcceeEECHHHHHHHHhcCCCCceeecHHHHHhh
Confidence 9999999864 222222222 2334778899999984 3468999999998877653 000
Q ss_pred -----cccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCC---ceEEEEEecCCccC
Q 014172 330 -----QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ---GAFYLFIDFSTYYG 401 (429)
Q Consensus 330 -----~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~---~~~~~~~~l~~~~~ 401 (429)
....+++...+.++.++++.- ....++...++++++++++.+.|.++ |+++..+. +++++|+.++..
T Consensus 227 ~~~~~~~~~t~~~~~~~a~~aal~~l--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-- 301 (356)
T cd06451 227 WGEGYSYPHTPPVNLLYALREALDLI--LEEGLENRWARHRRLAKALREGLEAL-GLKLLAKPELRSPTVTAVLVPEG-- 301 (356)
T ss_pred hcccCCCCCCChHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCCceEEEECCCC--
Confidence 112223444455555665431 13446778888899999999999987 87775322 455567777642
Q ss_pred CcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 402 SEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+..+++++|.+++||.+
T Consensus 302 ---------~~~~~~~~~L~~~~gI~~ 319 (356)
T cd06451 302 ---------VDGDEVVRRLMKRYNIEI 319 (356)
T ss_pred ---------CCHHHHHHHHHHhCCEEE
Confidence 367899999988778865
No 148
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.94 E-value=4e-25 Score=217.77 Aligned_cols=234 Identities=17% Similarity=0.217 Sum_probs=179.7
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChH----HHHHHcCC
Q 014172 126 TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADA 201 (429)
Q Consensus 126 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~ 201 (429)
.+| +++...+|++.++++.+ .+..++++|+++++..++ .++++||+|++++|.|++.. ..++..|+
T Consensus 47 ~r~-~~pt~~~le~~la~l~g--------~~~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~ 116 (366)
T PRK08247 47 SRT-GNPTRGVLEQAIADLEG--------GDQGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNV 116 (366)
T ss_pred cCC-CCchHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCc
Confidence 344 44556788888888863 233577888899999765 67899999999999999743 44556899
Q ss_pred EEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCC
Q 014172 202 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 281 (429)
Q Consensus 202 ~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~ 281 (429)
+++.++. .|++.+++++++++++|++++|+||+|.+.+ +++|+++|++| ++++|+|++|....+.
T Consensus 117 ~v~~vd~-------~d~~~l~~~i~~~tklv~le~P~NP~~~~~d---l~~I~~la~~~-g~~lIvD~t~~~~~~~---- 181 (366)
T PRK08247 117 RFVYVNT-------ASLKAIEQAITPNTKAIFIETPTNPLMQETD---IAAIAKIAKKH-GLLLIVDNTFYTPVLQ---- 181 (366)
T ss_pred eEEEECC-------CCHHHHHHhcccCceEEEEECCCCCCCcHHH---HHHHHHHHHHc-CCEEEEECCCcccccc----
Confidence 9999875 3899999999999999999999999876555 99999999999 9999999999642211
Q ss_pred CccccCCCCCCceEEEeccChhccc-ccceeeEEEcC-HHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHH
Q 014172 282 TSFASLPGMWERTLTVNGFSKAFAM-TGWRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 359 (429)
Q Consensus 282 ~~~~~~~~~~~~~i~~~S~SK~~~~-~G~R~G~v~~~-~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~ 359 (429)
.++ ..+.++++.|+||.++- .+.+.||++++ +++++.+...+...+.+.+.+.+.++...|+. +..
T Consensus 182 ~p~-----~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~t-------l~~ 249 (366)
T PRK08247 182 RPL-----EEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRGMKT-------LAL 249 (366)
T ss_pred Cch-----hcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhccCc-------HHH
Confidence 111 13566999999999963 34689999987 67888887776666666777777766665542 445
Q ss_pred HHHHHHHHHHHHHHHhccCCCce-eecC-CceEEEEEecC
Q 014172 360 MVKAFRERRDFLVKSFGELEGVK-MSEP-QGAFYLFIDFS 397 (429)
Q Consensus 360 ~~~~~~~~r~~l~~~L~~l~g~~-~~~p-~~~~~~~~~l~ 397 (429)
..++++++++.+.+.|++.|++. +..| .||+|.| .+.
T Consensus 250 r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf-~~~ 288 (366)
T PRK08247 250 RMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSF-RLQ 288 (366)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEE-EEC
Confidence 66677999999999999998876 4344 8999887 553
No 149
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.94 E-value=7.6e-25 Score=217.75 Aligned_cols=303 Identities=15% Similarity=0.129 Sum_probs=210.1
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCC------C--CCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFT------R--YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~------~--Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~a 167 (429)
..|+|.--.-.-++++.+++++.+....... . +...+...++++.+|+++ | .+++++++|++++
T Consensus 19 ~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~----g----~~~~~~~~g~t~a 90 (387)
T PRK09331 19 EFINLDPIQRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFL----G----MDEARVTHGAREG 90 (387)
T ss_pred cccccChhhcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHh----C----CCcEEEeCCHHHH
Confidence 4667655444445578899998887632100 1 111223467777777775 3 2468899999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-------CCcEEEEcCCCCC
Q 014172 168 ILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-------KSRLLILCSPSNP 240 (429)
Q Consensus 168 l~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-------~~~~i~l~~p~NP 240 (429)
+..++.+++++||+|+++.++|.+....++..|++++.++...+.++.+|++.+++++++ ++++|++++|+||
T Consensus 91 ~~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~ 170 (387)
T PRK09331 91 KFAVMHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGN 170 (387)
T ss_pred HHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCC
Confidence 999999999999999999999988888889999999999984334567999999998863 6899999999999
Q ss_pred ccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHH
Q 014172 241 TGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF 320 (429)
Q Consensus 241 tG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~ 320 (429)
||...+ +++|+++|++| |+++|+|++|+.. ..+.+... .+..+++.|++|+++ .+.|+||+++++++
T Consensus 171 tG~~~~---l~~I~~la~~~-g~~livD~a~~~g----~~~~~~~~----~g~D~~~~s~~K~l~-~~~~~G~l~~~~~~ 237 (387)
T PRK09331 171 YGNLAD---AKKVAKVAHEY-GIPFLLNGAYTVG----RMPVDGKK----LGADFIVGSGHKSMA-ASAPSGVLATTEEY 237 (387)
T ss_pred Cccccc---HHHHHHHHHHc-CCEEEEECCcccC----CcCCCHHH----cCCCEEEeeCccccc-CCCCEEEEEECHHH
Confidence 999998 99999999999 9999999999852 21222222 345689999999998 66799999999998
Q ss_pred HHHHHHHhhcc--------cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeec--CCceE
Q 014172 321 VAACNKIQSQF--------TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE--PQGAF 390 (429)
Q Consensus 321 ~~~l~~~~~~~--------~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~--p~~~~ 390 (429)
++.+.+....+ ..+.+.....++.++++. ..+.++ ..++..++++++.+.|++++|+++.. +....
T Consensus 238 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~---~~~~~~-~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~ 313 (387)
T PRK09331 238 ADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPH---VVERVK-RWDEEVKKARWFVDELEKIEGFKQLGEKPRNHD 313 (387)
T ss_pred HhhcccccCCCcccceeeeceecCchHHHHHHHHHHH---HHHHHH-HHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCC
Confidence 88775543211 112222233434444433 223333 34455667778999999998998873 22333
Q ss_pred EEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCee
Q 014172 391 YLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVL 427 (429)
Q Consensus 391 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~ 427 (429)
++.++.|..... .. ....+..++.++|.++ ||.
T Consensus 314 i~~~~~~~~~~~-~~--~~~~~~~~~~~~L~~~-gI~ 346 (387)
T PRK09331 314 LMKFETPSFDEI-AK--KHKRRGFFLYEELKKR-GIH 346 (387)
T ss_pred eEEEeCCchhHH-hh--hccccchhHHHHHHHc-Cce
Confidence 455665521000 00 0012456788888655 886
No 150
>PRK02948 cysteine desulfurase; Provisional
Probab=99.94 E-value=1.9e-25 Score=221.95 Aligned_cols=295 Identities=13% Similarity=0.065 Sum_probs=205.7
Q ss_pred EEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCC--CC--CHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHH
Q 014172 98 IRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPN--AG--TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (429)
Q Consensus 98 i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~--~G--~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~ 173 (429)
|.|+.+... ++|+.+++++.+.++....+++.. .| ..++.+.+.+.+.+..| .++++|++|+|+++++..++.
T Consensus 2 ~yld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g--~~~~~i~~~~g~t~a~~~~~~ 78 (381)
T PRK02948 2 IYLDYAATT-PMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIG--GEEQGIYFTSGGTESNYLAIQ 78 (381)
T ss_pred EeccCCCCC-CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhC--CCCCeEEEeCcHHHHHHHHHH
Confidence 456555544 357888999988776432222210 11 12333344444444445 367899999999999998888
Q ss_pred Hhc----CCCCEEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCC
Q 014172 174 AVC----SPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYP 246 (429)
Q Consensus 174 ~l~----~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~ 246 (429)
+++ ++||.|++....|+++.. .++..|++++.++++. ++.+|++++++.+++++++|++++|+||||.+++
T Consensus 79 ~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~ 156 (381)
T PRK02948 79 SLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDK--SGLIRLVDLERAITPDTVLASIQHANSEIGTIQP 156 (381)
T ss_pred HHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCC--CCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehh
Confidence 875 578999999977766544 4567799999999863 3568999999999888999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHH-HHHHH
Q 014172 247 KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF-VAACN 325 (429)
Q Consensus 247 ~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~-~~~l~ 325 (429)
+++|.++|+++ ++++++|+++.. +..+..+. ..+.++++.|++|.+|.+| +|++++++++ ...+.
T Consensus 157 ---~~~I~~l~~~~-~~~vivD~~~~~----g~~~~~~~----~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~ 222 (381)
T PRK02948 157 ---IAEIGALLKKY-NVLFHSDCVQTF----GKLPIDVF----EMGIDSLSVSAHKIYGPKG--VGAVYINPQVRWKPVF 222 (381)
T ss_pred ---HHHHHHHHHHc-CCEEEEEChhhc----cccccCcc----cCCCCEEEecHHhcCCCCc--EEEEEEcCCCCCCCcc
Confidence 88999999999 999999977654 21112222 2456788999999999788 7998877654 11111
Q ss_pred H----HhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCC-ceE----EEEEec
Q 014172 326 K----IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ-GAF----YLFIDF 396 (429)
Q Consensus 326 ~----~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~-~~~----~~~~~l 396 (429)
. .......+++.+++.++.++++. ..+++++.+++++++++++.+.|+++ |+++.... .++ .+-+.+
T Consensus 223 ~~~~~~~~~~~~t~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~v~~~~~~~~~~~~i~~~~~ 298 (381)
T PRK02948 223 PGTTHEKGFRPGTVNVPGIAAFLTAAEN---ILKNMQEESLRFKELRSYFLEQIQTL-PLPIEVEGHSTSCLPHIIGVTI 298 (381)
T ss_pred cCCCCCCCcCCCCccHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEeCCCccCcCCEEEEEe
Confidence 0 01112345788888888888875 34678888999999999999999998 66554322 221 122223
Q ss_pred CCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 397 STYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+. .+..++..+| +++||.|
T Consensus 299 ~~------------~~~~~~~~~l-~~~gI~v 317 (381)
T PRK02948 299 KG------------IEGQYTMLEC-NRRGIAI 317 (381)
T ss_pred CC------------CCHHHHHHhc-ccCCEEE
Confidence 32 1567788776 4559886
No 151
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.94 E-value=1.1e-24 Score=215.74 Aligned_cols=281 Identities=16% Similarity=0.199 Sum_probs=202.8
Q ss_pred ChHHHHHHHHHHHHcCCCCCCCCC-----------CCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcC
Q 014172 109 TPVLIAEAGINAIREGFTRYTPNA-----------GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS 177 (429)
Q Consensus 109 ~p~~v~~a~~~~~~~~~~~Y~~~~-----------G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~ 177 (429)
+|+.+++++.+.+.... .+ |.. ...++|+.+++++ |.+ ++++|++|+|+++++..++.++..
T Consensus 11 ~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~-~~~~v~~~~g~t~a~~~~~~~l~~ 83 (373)
T cd06453 11 KPQPVIDAIVDYYRHYN-AN-VHRGVHELSARATDAYEAAREKVARFI----NAP-SPDEIIFTRNTTEAINLVAYGLGR 83 (373)
T ss_pred CCHHHHHHHHHHHHhcC-CC-CCCCccHHHHHHHHHHHHHHHHHHHHh----CCC-CCCeEEEeCCHHHHHHHHHHHhhh
Confidence 46778888888775421 11 111 1235666666665 421 267999999999999999999987
Q ss_pred ---CCCEEEEcCCCCCCh----HHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHH
Q 014172 178 ---PGDEVIIPAPFWVSY----PEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLL 250 (429)
Q Consensus 178 ---~gd~Vlv~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l 250 (429)
+||+|++++++|++. ...++..|++++.++.+ .++.+|++++++.+.+++++|++++|+||||.+++ +
T Consensus 84 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~---~ 158 (373)
T cd06453 84 ANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVD--DDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINP---V 158 (373)
T ss_pred cCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecC--CCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCC---H
Confidence 899999999999874 34456789999999986 34568999999999989999999999999999999 8
Q ss_pred HHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhc
Q 014172 251 DEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ 330 (429)
Q Consensus 251 ~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~ 330 (429)
++|.++|++| ++++++|++|.... .+..+.. .+..+++.|++|.++. .++||+++++++++.+......
T Consensus 159 ~~i~~~~~~~-~~~li~D~a~~~~~----~~~~~~~----~~~d~~~~s~~K~~~~--~g~g~~~~~~~~~~~~~~~~~g 227 (373)
T cd06453 159 KEIGEIAHEA-GVPVLVDGAQSAGH----MPVDVQD----LGCDFLAFSGHKMLGP--TGIGVLYGKEELLEEMPPYGGG 227 (373)
T ss_pred HHHHHHHHHc-CCEEEEEhhhhcCc----eeeeccc----cCCCEEEeccccccCC--CCcEEEEEchHHhhcCCCeecC
Confidence 8999999999 99999999987422 1112222 2345777899999984 5689999999888776543211
Q ss_pred --------------------c-cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC---
Q 014172 331 --------------------F-TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP--- 386 (429)
Q Consensus 331 --------------------~-~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p--- 386 (429)
+ ...++.....++.++++.- .+..++.++++.+++++++.+.|++++|+++..+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l--~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 305 (373)
T cd06453 228 GEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYL--EKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAED 305 (373)
T ss_pred CCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHH--HHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccc
Confidence 0 1124444444444445420 1234567788888999999999999888887632
Q ss_pred CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 387 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.++ ++++.++.. +..++.++|.+ +||.+
T Consensus 306 ~~~-~~~~~~~~~------------~~~~i~~~l~~-~gi~i 333 (373)
T cd06453 306 RAG-VVSFNLEGI------------HPHDVATILDQ-YGIAV 333 (373)
T ss_pred cCC-eEEEEECCc------------CHHHHHHHHHH-CCEEe
Confidence 343 466677542 67788888866 48865
No 152
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.94 E-value=4.4e-24 Score=213.78 Aligned_cols=299 Identities=19% Similarity=0.211 Sum_probs=211.0
Q ss_pred CCCeEEcCCCC-CCCCChHHHHHHHHHHHHcCCCCC---CCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 94 GVSVIRLAAGE-PDFDTPVLIAEAGINAIREGFTRY---TPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 94 g~~~i~L~~g~-~~~~~p~~v~~a~~~~~~~~~~~Y---~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
++++++|+.++ ..+..+|++.+++.+++.+..... ....|..+..+.+++.+.+..| . +..++++++++++.
T Consensus 44 ~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g---~-~~~~~~~SG~~An~ 119 (406)
T PRK13393 44 PREVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHG---K-EAALLFTSGYVSNW 119 (406)
T ss_pred CccEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhC---C-CcEEEeCCcHHHHH
Confidence 35689988886 677778999999999987532211 1112434445555555555555 2 34444444556788
Q ss_pred HHHHHhcC--CCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc----cCCcEEEEcCCCCCccC
Q 014172 170 QAVLAVCS--PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSNPTGS 243 (429)
Q Consensus 170 ~~l~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~----~~~~~i~l~~p~NPtG~ 243 (429)
.++..+.. +||.|++....|......++..|.+++.++. .|++.+++.+. +++++|++++++|++|.
T Consensus 120 ~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~ 192 (406)
T PRK13393 120 AALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLDPHRPKLVAFESVYSMDGD 192 (406)
T ss_pred HHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCc
Confidence 78887765 7888888888888888888888998877764 26666666553 35788899999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCC-CCceEEEeccChhcccccceeeEEEcCHHHHH
Q 014172 244 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM-WERTLTVNGFSKAFAMTGWRLGYIAGPKHFVA 322 (429)
Q Consensus 244 ~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~ 322 (429)
+.+ +++|.++|++| ++++|+||+|....|+..... +....+. .+.+|+++||||.+|++| ||+++++++++
T Consensus 193 ~~~---l~~i~~l~~~~-~~~livDea~~~g~~g~~G~g-~~~~~~~~~~~~i~~~tlsKa~g~~G---G~~~~~~~~~~ 264 (406)
T PRK13393 193 IAP---IAEICDVAEKH-GAMTYLDEVHAVGLYGPRGGG-IAEREGLADRLTIIEGTLAKAFGVMG---GYITGSAALCD 264 (406)
T ss_pred hhC---HHHHHHHHHHc-CCEEEEECCccccccCCCCCc-hhhhcCCCCCCeEEEEeCchhhcccC---ceeeCCHHHHH
Confidence 999 99999999999 999999999985555432221 1121111 234688899999999888 99999999999
Q ss_pred HHHHHhhcc--cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCcc
Q 014172 323 ACNKIQSQF--TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYY 400 (429)
Q Consensus 323 ~l~~~~~~~--~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~ 400 (429)
.+......+ +.+.+...+.++.++|+. .++. ...+.+++++++++.+.|+++ |+++.++.+++ +.+.++..
T Consensus 265 ~l~~~~~~~~~t~~~~p~~~aa~~aaL~~---~~~~-~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~i-~~v~~~~~- 337 (406)
T PRK13393 265 FIRSFASGFIFTTSLPPAVAAGALASVRH---LKAS-SAERERHQDRVARLRARLDKA-GIPHLPNPSHI-VPVMVGDP- 337 (406)
T ss_pred HHHHhCcCceecCccCHHHHHHHHHHHHH---HhhC-HHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCe-EEEEeCCH-
Confidence 888765443 344566777888888875 2222 233466788899999999887 77777777766 44444321
Q ss_pred CCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 401 GSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+..+++++|++++||.+
T Consensus 338 ----------~~~~~l~~~L~~~~Gi~v 355 (406)
T PRK13393 338 ----------VLCKQISDELLDRYGIYV 355 (406)
T ss_pred ----------HHHHHHHHHHHHhCCEEE
Confidence 145789999988779876
No 153
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.94 E-value=1.4e-24 Score=216.69 Aligned_cols=287 Identities=16% Similarity=0.127 Sum_probs=215.5
Q ss_pred CCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcC
Q 014172 107 FDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPA 186 (429)
Q Consensus 107 ~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~ 186 (429)
...|+.+++++.+.. ..| ...+..++++.+.+++++.+|.+ ..+.+++++|+++++..++..++++||+|++.+
T Consensus 18 ~~~~~~V~~a~~~~~----~~~-~~~~~~~~~~~~~~~l~~~~g~~-~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~ 91 (401)
T PLN02409 18 VNIPERVLRAMNRPN----EDH-RSPAFPALTKELLEDVKYIFKTK-SGTPFIFPTTGTGAWESALTNTLSPGDKVVSFR 91 (401)
T ss_pred CCCCHHHHHHhcCCC----CCC-CCHHHHHHHHHHHHHHHHHhCCC-CCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeC
Confidence 345777887775432 223 24567889999999999998853 234788899999999999999999999999999
Q ss_pred CCCCCh--HHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc----CCcEEEEcCCCCCccCCCCHHHHHHHHHH--HH
Q 014172 187 PFWVSY--PEMARIADATPVILPTRISENFLLDPKVLESKLTE----KSRLLILCSPSNPTGSVYPKNLLDEIARI--VA 258 (429)
Q Consensus 187 p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~----~~~~i~l~~p~NPtG~~~~~~~l~~I~~~--a~ 258 (429)
+.|.+. ...++..|++++.++.+.+ ..+|++++++++++ ++++|++++++||||.++| +++|.++ |+
T Consensus 92 ~~~~~~~~~~~~~~~g~~v~~v~~~~~--~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~---~~~i~~l~~~~ 166 (401)
T PLN02409 92 IGQFSLLWIDQMQRLNFDVDVVESPWG--QGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTND---LAGVRKLLDCA 166 (401)
T ss_pred CCchhHHHHHHHHHcCCceEEEECCCC--CCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCC---HHHHHHHHhhh
Confidence 988766 4677888999999998643 34799999999975 7899999999999999999 5555555 99
Q ss_pred hCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhh---------
Q 014172 259 KHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS--------- 329 (429)
Q Consensus 259 ~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~--------- 329 (429)
++ |+++|+|++++. +..+..+. .++.++++.|.+|+++.| .++||++.++++++.+.....
T Consensus 167 ~~-g~~~vvD~v~s~----g~~~id~~----~~~~D~~~~s~~K~l~~P-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 236 (401)
T PLN02409 167 QH-PALLLVDGVSSI----GALDFRMD----EWGVDVALTGSQKALSLP-TGLGIVCASPKALEASKTAKSPRVFFDWAD 236 (401)
T ss_pred cc-CcEEEEEccccc----CCcccccc----ccCccEEEEcCccccCcC-CCcceeEECHHHHHHHhcCCCCCeecCHHH
Confidence 99 999999999874 22221221 135558888889999743 479999999998887653210
Q ss_pred ---------cccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCC----ceEEEEEec
Q 014172 330 ---------QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ----GAFYLFIDF 396 (429)
Q Consensus 330 ---------~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~----~~~~~~~~l 396 (429)
....+++...+.++..+++.- .+..++++.++++++++++.+.|+++ |+++..+. .+..+++.+
T Consensus 237 ~~~~~~~g~~~~~Tp~~~~~~al~~al~~~--~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~~~~~~~~s~~v~~~~~ 313 (401)
T PLN02409 237 YLKFYKLGTYWPYTPSIQLLYGLRAALDLI--FEEGLENVIARHARLGEATRLAVEAW-GLKLCTKKPEWRSDTVTAVVV 313 (401)
T ss_pred HHHHHhcCCCCCCCccHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcccceEEEeC
Confidence 012346666677777777641 13457888999999999999999888 88876542 223356777
Q ss_pred CCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 397 STYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|.. .+..++.+.|++++||.+
T Consensus 314 p~~-----------~~~~~l~~~l~~~~~i~i 334 (401)
T PLN02409 314 PEG-----------IDSAEIVKNAWKKYNLSL 334 (401)
T ss_pred CCC-----------CCHHHHHHHHHHhCCEEE
Confidence 643 367889999999988875
No 154
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.94 E-value=4.6e-25 Score=216.10 Aligned_cols=277 Identities=16% Similarity=0.147 Sum_probs=207.0
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcC------------
Q 014172 110 PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS------------ 177 (429)
Q Consensus 110 p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~------------ 177 (429)
+..+.+.+...+......|....+..++++++++++.+.+|.+.++.++++|+|+++++..++.+++.
T Consensus 12 ~~~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~ 91 (345)
T cd06450 12 PALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGR 91 (345)
T ss_pred HHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhccccc
Confidence 44566666666654445688888999999999999999999754456899999999999999988753
Q ss_pred CC--CEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------CCcEEEEcCCCCCccCCCCHHH
Q 014172 178 PG--DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNL 249 (429)
Q Consensus 178 ~g--d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~~~~i~l~~p~NPtG~~~~~~~ 249 (429)
+| +.|+++.++|.++...++..|++++.++++++ +.+|++.|++++++ +++++++++|+||||.+.+
T Consensus 92 ~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~--- 166 (345)
T cd06450 92 GIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDED--GRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP--- 166 (345)
T ss_pred ccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCC--CCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC---
Confidence 33 47889999999999999999999999998643 46899999999987 7888889999999999987
Q ss_pred HHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhh
Q 014172 250 LDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS 329 (429)
Q Consensus 250 l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~ 329 (429)
+++|+++|++| |+++++|++|..+.+........ .....+...+..|++|.++ ++.++|+++.+
T Consensus 167 ~~~i~~~~~~~-~~~l~vD~a~~~~~~~~~~~~~~--~~~~~~~d~~~~s~~K~l~-~p~g~g~~~~~------------ 230 (345)
T cd06450 167 LEEIADLAEKY-DLWLHVDAAYGGFLLPFPEPRHL--DFGIERVDSISVDPHKYGL-VPLGCSAVLVR------------ 230 (345)
T ss_pred HHHHHHHHHHh-CCeEEEechhhHHHhhChhhHHH--hcCccccCEEEEchhHhhC-CCcchHHHHHH------------
Confidence 99999999999 99999999999766432111111 1111233466789999876 77888987554
Q ss_pred cccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeec-CCceEEEEEecCCccCCcccCCC
Q 014172 330 QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-PQGAFYLFIDFSTYYGSEAEGFG 408 (429)
Q Consensus 330 ~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~-p~~~~~~~~~l~~~~~~~~~~~~ 408 (429)
.+.+.++...+. .+.+++++++..++++++.+.|++++++++.. ++++++ .+.++....
T Consensus 231 -------~~~~~~~l~~l~-----~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv-~f~~~~~~~------- 290 (345)
T cd06450 231 -------ALKLWATLRRFG-----RDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLV-CFRLKPSVK------- 290 (345)
T ss_pred -------HHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEE-EEEECCcch-------
Confidence 444444555543 45677888888899999999999988887654 566664 444542100
Q ss_pred CCCChHHHHHHHHHhCCee
Q 014172 409 KIENSESLCRYLLDKAQVL 427 (429)
Q Consensus 409 ~~~~~~~~~~~Ll~~~gV~ 427 (429)
...+..++.++|.+++++.
T Consensus 291 ~~~~~~~i~~~L~~~g~~~ 309 (345)
T cd06450 291 LDELNYDLSDRLNERGGWH 309 (345)
T ss_pred hhHHHHHHHHHHHhcCCEE
Confidence 0014678999987774544
No 155
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.93 E-value=6.6e-24 Score=213.28 Aligned_cols=300 Identities=15% Similarity=0.113 Sum_probs=201.7
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCC-CCCCCC---CC---CHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGF-TRYTPN---AG---TLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~-~~Y~~~---~G---~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~a 167 (429)
++.|+|..+++. +|+.+++++...+...+ ..++.. .| ...+.+...+.+++.+|. +..+|++++| +++
T Consensus 25 ~~~~~l~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~i~~~sg-t~a 99 (416)
T PRK00011 25 EEHIELIASENF--VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGA--EYANVQPHSG-SQA 99 (416)
T ss_pred hcCeeeecccCc--CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCC--CceeeecCCc-hHH
Confidence 468999999977 67889998877653211 011100 12 122333234466666774 3445666655 678
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCCChHH-----HHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-CCcEEEEcCCCCCc
Q 014172 168 ILQAVLAVCSPGDEVIIPAPFWVSYPE-----MARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPT 241 (429)
Q Consensus 168 l~~~l~~l~~~gd~Vlv~~p~y~~~~~-----~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~p~NPt 241 (429)
+..++.+++++||+|+++.|+|.++.. .....|++++.++++. +++.+|++++++.+++ ++++|++++++|
T Consensus 100 l~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~k~v~~~~~~~-- 176 (416)
T PRK00011 100 NAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDE-ETGLIDYDEVEKLALEHKPKLIIAGASAY-- 176 (416)
T ss_pred HHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCc-ccCCcCHHHHHHHHHhcCCCEEEECCCcC--
Confidence 999999999999999999999986532 1234467888888764 3467999999999975 789998876655
Q ss_pred cCCCCHHHHHHHHHHHHhCCCeEEEEccCCcc-cccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcC-HH
Q 014172 242 GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KH 319 (429)
Q Consensus 242 G~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~-~~ 319 (429)
|...+ +++|.++|++| |+++|+|++|.. +.+.+..+..+. ...++++||||++ +|+|.||++++ ++
T Consensus 177 ~~~~~---~~~I~~la~~~-~~~livD~a~~~g~~~~g~~~~~~~------~~di~~~S~~K~l--~g~~gg~i~~~~~~ 244 (416)
T PRK00011 177 SRPID---FKRFREIADEV-GAYLMVDMAHIAGLVAAGVHPSPVP------HADVVTTTTHKTL--RGPRGGLILTNDEE 244 (416)
T ss_pred CCccC---HHHHHHHHHHc-CCEEEEECcchhcccccCccCCCCC------CCcEEEecCCcCC--CCCCceEEEeCCHH
Confidence 45566 89999999999 999999999863 222221111111 2348899999976 68999999996 68
Q ss_pred HHHHHHHHhhcccCCCchH-HHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeec-CCceEEEEEecC
Q 014172 320 FVAACNKIQSQFTSGASSI-SQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-PQGAFYLFIDFS 397 (429)
Q Consensus 320 ~~~~l~~~~~~~~~~~~~~-~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~-p~~~~~~~~~l~ 397 (429)
+++.+.+.......+.+.. .+.++..++... ..+++++..++++++++++.+.|+++ |+++.. ...++++|+.++
T Consensus 245 ~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~i~~~ 321 (416)
T PRK00011 245 LAKKINSAVFPGIQGGPLMHVIAAKAVAFKEA--LEPEFKEYAQQVVKNAKALAEALAER-GFRVVSGGTDNHLVLVDLR 321 (416)
T ss_pred HHHHHHHHhCccccCCccHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeecCCCCeEEEEeCc
Confidence 8888877655443333322 333322233210 23457888899999999999999987 887653 123478899986
Q ss_pred CccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 398 TYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+. + .+..++.+.|. +.||.+
T Consensus 322 ~~-~---------~~~~~~~~~L~-~~GI~v 341 (416)
T PRK00011 322 SK-G---------LTGKEAEAALE-EANITV 341 (416)
T ss_pred cc-C---------CCHHHHHHHHH-HcCcEE
Confidence 32 0 14567777664 559876
No 156
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.93 E-value=1.8e-24 Score=217.17 Aligned_cols=316 Identities=16% Similarity=0.155 Sum_probs=215.6
Q ss_pred cCCCeEEcCCCC--CCCC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..||+..|. ..++ .++.+.+++.+++... ..|....+..++...+++.+.+.+|. ..++|++++|+++++.
T Consensus 34 dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~v~~~~sgsea~~ 110 (413)
T cd00610 34 DGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKL-THFSLGFFYNEPAVELAELLLALTPE--GLDKVFFVNSGTEAVE 110 (413)
T ss_pred CCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhC-cCccCcccCCHHHHHHHHHHHHhCCC--CCCEEEEcCcHHHHHH
Confidence 577899999874 4455 5889999999988653 45544334677888888888877764 5689999999999999
Q ss_pred HHHHHhc--CCCCEEEEcCCCCCChHHHHHHcC-------------CEEEEecCCCC----CCCCCCHHHHHhhccc---
Q 014172 170 QAVLAVC--SPGDEVIIPAPFWVSYPEMARIAD-------------ATPVILPTRIS----ENFLLDPKVLESKLTE--- 227 (429)
Q Consensus 170 ~~l~~l~--~~gd~Vlv~~p~y~~~~~~~~~~g-------------~~~~~v~~~~~----~~~~~d~e~l~~~l~~--- 227 (429)
.+++.+. .+++.|++.+++|.++.......+ .+++.+|.+.. ..+..|++.+++.+++
T Consensus 111 ~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 190 (413)
T cd00610 111 AALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPE 190 (413)
T ss_pred HHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCC
Confidence 9999874 578999999999998665443322 23556665421 1244589999998875
Q ss_pred CCcEEEEcCCCCCccCCC-CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccc
Q 014172 228 KSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~~~-~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 306 (429)
+++++++...+|++|.++ +.+++++|.++|++| ++++|+||+|.++.+.+.. ... ... +...-+.||||.++
T Consensus 191 ~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~-~~~li~Dev~~g~g~~g~~-~~~-~~~---~~~~d~~t~sK~l~- 263 (413)
T cd00610 191 EVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKH-GILLIADEVQTGFGRTGKM-FAF-EHF---GVEPDIVTLGKGLG- 263 (413)
T ss_pred CEEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCcch-hhH-hhc---CCCCCeEEEccccc-
Confidence 455555555567789876 677799999999999 9999999999976433321 111 111 11122568999999
Q ss_pred ccceeeEEEcCHHHHHHH--HHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC---C-
Q 014172 307 TGWRLGYIAGPKHFVAAC--NKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE---G- 380 (429)
Q Consensus 307 ~G~R~G~v~~~~~~~~~l--~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~---g- 380 (429)
.|+|+||+++++++++.+ .......+.+.+.+++.++.++|+. .++ .++.++++++++++.+.|+++. +
T Consensus 264 ~g~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~---l~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~ 338 (413)
T cd00610 264 GGLPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEV---LEE--EGLLENAAELGEYLRERLRELAEKHPL 338 (413)
T ss_pred CccccEEEEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHH---HHh--ccHHHHHHHHHHHHHHHHHHHHhhCCc
Confidence 589999999999998886 3333344566788888888888864 122 3456677777777777776641 2
Q ss_pred ceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 381 VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 381 ~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+....+. |.++|+.++...... ........++++.|+++ ||.+
T Consensus 339 ~~~~~~~-g~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~-gv~v 381 (413)
T cd00610 339 VGDVRGR-GLMIGIELVKDRATK---PPDKELAAKIIKAALER-GLLL 381 (413)
T ss_pred EEEeecC-ceEEEEEEecCCCcC---CcchHHHHHHHHHHHHC-CeEE
Confidence 2222344 455777775320000 00001457788888776 8876
No 157
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.93 E-value=5.6e-24 Score=209.30 Aligned_cols=243 Identities=20% Similarity=0.224 Sum_probs=180.8
Q ss_pred ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCC--------
Q 014172 109 TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGD-------- 180 (429)
Q Consensus 109 ~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd-------- 180 (429)
+|+++++++.+...+ |. +..++++++++++++.+|. +++++|+|+++++.+++.+++++||
T Consensus 25 ~~~~v~~a~~~~~~~----~~---~~~~~~~~~~~~~a~~~g~----~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~ 93 (363)
T TIGR01437 25 VSDEVADAQKRGAQN----YF---EIKELVNKTGEYIANLLGV----EDAVIVSSASAGIAQSVAAVITRGNRYLVENLH 93 (363)
T ss_pred CCHHHHHHHHHHHhc----CC---CHHHHHHHHHHHHHHhhCC----CeEEEEcCHHHHHHHHHHHHhcCCCcchhhccc
Confidence 589999999988643 42 3578899999999888773 4789999999999999999999998
Q ss_pred -------EEEEcCCCCCCh----HHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEE-EcCCCCCccCCCCHH
Q 014172 181 -------EVIIPAPFWVSY----PEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLI-LCSPSNPTGSVYPKN 248 (429)
Q Consensus 181 -------~Vlv~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~-l~~p~NPtG~~~~~~ 248 (429)
+|+++.|.|..| ...+...|++++.++.+ +.+|++++++++++++++++ +++|+||+|.+.+
T Consensus 94 ~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~----~~~d~~~le~ai~~~t~ai~~v~~~~~~~g~~~~-- 167 (363)
T TIGR01437 94 DSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA----NECSAEQLEAAITEKTAAILYIKSHHCVQKSMLS-- 167 (363)
T ss_pred ccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC----CCCCHHHHHHhcChhceEEEEEecCCCCcCCcCC--
Confidence 999999888766 57788899999999862 34899999999999999776 6889999999999
Q ss_pred HHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHh
Q 014172 249 LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ 328 (429)
Q Consensus 249 ~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~ 328 (429)
+++|+++|++| |+++|+|++|+.-. ..+..+ +..+++.|++|.+ +|++.||+++++++++.+....
T Consensus 168 -~~~i~~~a~~~-gi~vivD~a~~~~~------~~~~~~----g~D~~~~S~~K~l--~gp~~G~l~~~~~~i~~~~~~~ 233 (363)
T TIGR01437 168 -VEDAAQVAQEH-NLPLIVDAAAEEDL------QKYYRL----GADLVIYSGAKAI--EGPTSGLVLGKKKYIEWVKLQS 233 (363)
T ss_pred -HHHHHHHHHHc-CCeEEEECCCCCch------HHHHHc----CCCEEEEeCCccc--CCCceEEEEEcHHHHHHHHhcc
Confidence 78899999999 99999999997210 111122 3358889999976 6889999999988887764322
Q ss_pred hccc--CCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeec
Q 014172 329 SQFT--SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 385 (429)
Q Consensus 329 ~~~~--~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~ 385 (429)
.... .........+..++++. ..++..+..+.+.++++.+.+.|++++|+++..
T Consensus 234 ~~~~~~~~~~~~~~~gl~aAl~~---~~~~~~~~~~~~~~~~~~l~~~L~~i~g~~~~~ 289 (363)
T TIGR01437 234 KGIGRAMKVGKENILGLTAALEQ---YLSTGKESGAEMVAKLTPFIEALNTLKGVSASI 289 (363)
T ss_pred CCCcceeccCHHHHHHHHHHHHH---HHccCcccHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 1110 00111222233333332 111222344455667888999999999988763
No 158
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.93 E-value=3.1e-24 Score=213.27 Aligned_cols=286 Identities=16% Similarity=0.110 Sum_probs=206.3
Q ss_pred ChHHHHHHHHHHHHcCCC------CCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhc-----C
Q 014172 109 TPVLIAEAGINAIREGFT------RYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC-----S 177 (429)
Q Consensus 109 ~p~~v~~a~~~~~~~~~~------~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~-----~ 177 (429)
+++.+++++.+.+..... .| +..+...+++++++++.. .|. .++++|++|+|+++++..+++++. +
T Consensus 11 ~~~~v~~~~~~~~~~~~~n~~~~~~~-~~~~~~~l~~a~~~~~~~-~~~-~~~~~i~~t~g~teal~~~~~~~~~~~~~~ 87 (382)
T TIGR03403 11 LDPKVKELMDPFFCDIYGNPNSLHQF-GTATHPAIAEALDKLYKG-INA-RDLDDIIITSCATESNNWVLKGVYFDEILK 87 (382)
T ss_pred CCHHHHHHHHHHHHhcCcCCccccHH-HHHHHHHHHHHHHHHHHH-cCc-CCCCeEEEeCCHHHHHHHHHHHHHHhhccc
Confidence 467899999888764221 12 123456888888888753 332 257899999999999999888762 4
Q ss_pred C-CCEEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHH
Q 014172 178 P-GDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEI 253 (429)
Q Consensus 178 ~-gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I 253 (429)
+ +++|+++...|+++.. .++..|++++.+|+++ ++.+|++.++++++++++++++++|+||||.+++ +++|
T Consensus 88 ~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~--~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~---~~~I 162 (382)
T TIGR03403 88 GGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINE--QGTITAEQVREAITEKTALVSVMWANNETGMIFP---IKEI 162 (382)
T ss_pred CCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCC--CCCCCHHHHHHhcccCCeEEEEEcccCCCccccC---HHHH
Confidence 5 4789999877776554 4567899999999864 3568999999999989999999999999999999 7899
Q ss_pred HHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHH--HHHH---HHHh
Q 014172 254 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF--VAAC---NKIQ 328 (429)
Q Consensus 254 ~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~--~~~l---~~~~ 328 (429)
.++|+++ |+++++|+++.. +..+..+.. .+..+++.|++|.+|.+| +|+++..+.. ...+ ....
T Consensus 163 ~~la~~~-g~~~ivD~a~~~----g~~~~~~~~----~~~D~~~~s~~K~~gp~G--~g~l~vr~~~~~~p~~~g~~~~~ 231 (382)
T TIGR03403 163 GEICKER-GVLFHTDAVQAI----GKIPVDVQK----AGVDFLSFSAHKFHGPKG--VGGLYIRKGVELTPLFHGGEHMG 231 (382)
T ss_pred HHHHHHc-CCEEEEechhhc----CCCccCccc----cCCCEEEEcchhhCCCCc--eEEEEECCCCCCCCcccCCCCCC
Confidence 9999999 999999999874 222222221 244588999999888777 5777654432 1111 0011
Q ss_pred hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCc---eEEEEEecCCccCCccc
Q 014172 329 SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG---AFYLFIDFSTYYGSEAE 405 (429)
Q Consensus 329 ~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~---~~~~~~~l~~~~~~~~~ 405 (429)
.....+++.+.+.++..+++. ..++++...+++++.++++.+.|++++|+++..+.. +.++.+.++..
T Consensus 232 ~~~~gt~~~~~~~al~~al~~---~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 302 (382)
T TIGR03403 232 GRRSGTLNVPYIVAMGEAMRL---ANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKGV------ 302 (382)
T ss_pred CcccCCcChHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCC------
Confidence 112344677777777778765 355677888899999999999999988998876542 33456666542
Q ss_pred CCCCCCChHHHHHHHHHhCCeecC
Q 014172 406 GFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 406 ~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
+..++..+|. +.||.++
T Consensus 303 ------~~~~~~~~L~-~~gI~v~ 319 (382)
T TIGR03403 303 ------EGEAMLWDLN-KAGIAAS 319 (382)
T ss_pred ------CHHHHHHhhc-cCCEEEE
Confidence 5778887764 5588763
No 159
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.93 E-value=3.6e-24 Score=212.33 Aligned_cols=296 Identities=13% Similarity=0.133 Sum_probs=207.1
Q ss_pred EcCCCCCCCCChHHHHHHHHHHHHcCC--CC---CCC----CCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 99 RLAAGEPDFDTPVLIAEAGINAIREGF--TR---YTP----NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 99 ~L~~g~~~~~~p~~v~~a~~~~~~~~~--~~---Y~~----~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.+..++++|+.+.+++.+.++... .. |.. ..+..++|+.+++++ |.+ ..++|++|+|+++++.
T Consensus 2 yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~-~~~~v~~~~g~t~al~ 76 (376)
T TIGR01977 2 YFDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLF----NAP-SSAHVVFTNNATTALN 76 (376)
T ss_pred CccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHh----CcC-CCCeEEEeCCHHHHHH
Confidence 466677777888999999988876532 12 211 134456777777776 421 3358999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCCCChHH----HHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCC
Q 014172 170 QAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVY 245 (429)
Q Consensus 170 ~~l~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~ 245 (429)
+++.+++++||+|+++.+.|.++.. .++..|.+++.++.+. ++.+|+++++++++++++++++++|+||||.++
T Consensus 77 ~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~ 154 (376)
T TIGR01977 77 IALKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDN--EGLISPERIKRAIKTNTKLIVVSHASNVTGTIL 154 (376)
T ss_pred HHHHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHhcCCCCeEEEEECCCCCccccC
Confidence 9999999999999999999987653 4556699999998763 456899999999998999999999999999999
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHH-HHHH
Q 014172 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF-VAAC 324 (429)
Q Consensus 246 ~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~-~~~l 324 (429)
+ +++|.++|+++ |+++|+|++++... ....+. ..+..+++.|++|.++.|. ..|.++..++. +..+
T Consensus 155 ~---~~~i~~l~~~~-~~~livD~a~~~g~----~~~~~~----~~~~D~~~~s~~K~l~~p~-g~g~l~~~~~~~~~~~ 221 (376)
T TIGR01977 155 P---IEEIGELAQEN-GIFFILDAAQTAGV----IPIDMT----ELAIDMLAFTGHKGLLGPQ-GTGGLYIREGIKLKPL 221 (376)
T ss_pred C---HHHHHHHHHHc-CCEEEEEhhhccCc----cCCCch----hcCCCEEEecccccccCCC-CceEEEEcCCcCcCce
Confidence 9 78899999999 99999999997532 111111 1345688999999885332 35666554432 1111
Q ss_pred HHH----------------hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCC-
Q 014172 325 NKI----------------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ- 387 (429)
Q Consensus 325 ~~~----------------~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~- 387 (429)
... .+....+++.....++.++++.- .+...+.++++.+++.+.+.+.|.+++|+++..|.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~--~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~ 299 (376)
T TIGR01977 222 KSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFI--EKIGIANIAKKECMLTEKLLNGLREINKVKIYGPAD 299 (376)
T ss_pred ecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC
Confidence 100 00011234444555555555430 12235667788888999999999988788876541
Q ss_pred ---ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 388 ---GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 388 ---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+..+++.+++. +..++.+.|.+++||.+
T Consensus 300 ~~~~~~~v~~~~~~~------------~~~~~~~~L~~~~gi~v 331 (376)
T TIGR01977 300 PANRVGVVSFTVEGI------------DSEEVADILDEKFDIAT 331 (376)
T ss_pred ccccCCeEEEEECCC------------CHHHHHHHHhccCCEEE
Confidence 123467777643 67789988887768765
No 160
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.93 E-value=1.8e-23 Score=206.97 Aligned_cols=317 Identities=15% Similarity=0.156 Sum_probs=218.8
Q ss_pred HHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEe
Q 014172 82 AITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVS 161 (429)
Q Consensus 82 ~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t 161 (429)
++.+..+.+.+.+.+.-.+ .|...-++.+.+.+++.+.+...........+..++.+.+.+++.+.+|. ++.+++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~--~~~~~~~~ 82 (371)
T PRK13520 6 EILEELEEYRSEDLKYERI-LSSMCTEPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHL--PDAYGYIT 82 (371)
T ss_pred HHHHHHHHHHhcCCCHHHe-eeeeecCchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCC--CCCCeEEe
Confidence 4555666666665443222 33323335677888888877643211111235566667777777777773 45678999
Q ss_pred cChHHHHHHHHHHhcC----CCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCC
Q 014172 162 NGAKQSILQAVLAVCS----PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSP 237 (429)
Q Consensus 162 ~G~~~al~~~l~~l~~----~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p 237 (429)
+|+++++..++.++.. +||+|++.++.|.++...++..|++++.+|.+ .++.+|++.|++++++++++|+++++
T Consensus 83 ~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~vi~~~~ 160 (371)
T PRK13520 83 SGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDKAADMLGVELRRAPLD--DDYRVDVKAVEDLIDDNTIGIVGIAG 160 (371)
T ss_pred cCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHHHHHHcCceEEEecCC--CCCcCCHHHHHHHHhhCCEEEEEEcC
Confidence 9999999988877654 57999999999999999999999999999975 34568999999999888888888889
Q ss_pred CCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEc-
Q 014172 238 SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG- 316 (429)
Q Consensus 238 ~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~- 316 (429)
+|+||.+.+ +++|.++|+++ |+++++|++|..+...-........+. ..+...+..|.+|. +++|.++|+++.
T Consensus 161 ~~~tG~~~~---l~~I~~l~~~~-g~~livD~a~~~~~~~~~~~~~~~~~~-~~~vd~~~~s~~K~-~~a~~~~G~~~~~ 234 (371)
T PRK13520 161 TTELGQVDP---IPELSKIALEN-GIFLHVDAAFGGFVIPFLDDPPNFDFS-LPGVDSITIDPHKM-GLAPIPAGGILFR 234 (371)
T ss_pred CcCCcccCC---HHHHHHHHHHc-CCCEEEEecchhHHHHhhcCCCCcccc-CCCCceEEECCccc-cCccCCceEEEEc
Confidence 999999999 99999999999 999999999986542110110111111 12333555677884 557889998775
Q ss_pred CHHHHHHHHHHhhcc--------cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCce-eecCC
Q 014172 317 PKHFVAACNKIQSQF--------TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQ 387 (429)
Q Consensus 317 ~~~~~~~l~~~~~~~--------~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~-~~~p~ 387 (429)
++++++.+....... ..+.+.....++.++++.- .++.+++++++..++++++.+.|+++ |++ +..+.
T Consensus 235 ~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l--~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 311 (371)
T PRK13520 235 DESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYL--GREGYRKVVERCMENTRWLAEELKER-GFEPVIEPV 311 (371)
T ss_pred CHHHHHhhcccCccccCCCCcceEeeccChHHHHHHHHHhhh--cHhHHHHHHHHHHHHHHHHHHHHHhC-CCEEecCCC
Confidence 666776654211111 0112334455566666531 24557788899999999999999988 887 55666
Q ss_pred ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 388 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.++ +.++++ +..++.++|.++ ||.|
T Consensus 312 ~~~-v~~~~~--------------~~~~v~~~L~~~-gi~v 336 (371)
T PRK13520 312 LNI-VAFDDP--------------NPDEVREKLRER-GWRV 336 (371)
T ss_pred ceE-EEEecC--------------CHHHHHHHHHHC-Ccee
Confidence 664 566664 467899888776 8876
No 161
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.93 E-value=1e-23 Score=207.24 Aligned_cols=289 Identities=12% Similarity=0.160 Sum_probs=200.9
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEc
Q 014172 106 DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIP 185 (429)
Q Consensus 106 ~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~ 185 (429)
+..+++.+.+++.... ..+.+ ...+..+.+.+.+.+..|.+-+...|++++|+++++..++..++.+||+|++.
T Consensus 7 p~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~ 80 (355)
T TIGR03301 7 PLSTSATVRDAMLVDW----CHWDS--EFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVL 80 (355)
T ss_pred CCCCCHHHHHHhhhhc----cCCCH--HHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEE
Confidence 3445677777776632 12211 22344555555555555643222368889999999999999999888887766
Q ss_pred CCC-CCC-hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc--CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCC
Q 014172 186 APF-WVS-YPEMARIADATPVILPTRISENFLLDPKVLESKLTE--KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP 261 (429)
Q Consensus 186 ~p~-y~~-~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~ 261 (429)
.+. |.. +...++..|++++.++.+. ++.+|++.+++.+++ +.+.+++++++||||...+ +++|+++|++|
T Consensus 81 ~~~~~~~~~~~~a~~~g~~~~~i~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~- 154 (355)
T TIGR03301 81 INGAYGERLAKICEYLGIPHTDLNFSE--YEPPDLNRIEEALAADPDITHVATVHHETTTGILNP---LEAIAKVARSH- 154 (355)
T ss_pred CCCchhhHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhH---HHHHHHHHHHc-
Confidence 554 443 4567888999999998753 456899999999864 4567778999999999998 89999999999
Q ss_pred CeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhc-ccccceeeEEEcCHHHHHHHHHHh------------
Q 014172 262 RLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF-AMTGWRLGYIAGPKHFVAACNKIQ------------ 328 (429)
Q Consensus 262 ~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~R~G~v~~~~~~~~~l~~~~------------ 328 (429)
++++|+|++++.. ..+.++.. .+..++++|++|.+ |++| +||+++++++++.+....
T Consensus 155 ~~~livD~~~s~g----~~~~~~~~----~~~d~~~~s~~K~l~~~~G--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (355)
T TIGR03301 155 GAVLIVDAMSSFG----AIPIDIEE----LDVDALIASANKCLEGVPG--FGFVIARRDLLEASAGNARSLYLDLYDQWA 224 (355)
T ss_pred CCEEEEEeccccC----Ccccchhh----cCccEEEecCCcccccCCc--eeEEEECHHHHHHhhCCCCCceeeHHHHHH
Confidence 9999999877642 12222222 35668899999987 4455 799999999888765210
Q ss_pred -----hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC---CceEEEEEecCCcc
Q 014172 329 -----SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP---QGAFYLFIDFSTYY 400 (429)
Q Consensus 329 -----~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p---~~~~~~~~~l~~~~ 400 (429)
....++++...+.++..+++.-. .+.++++..++++++++++.+.|+++ |+++..+ .+++++|+.+|...
T Consensus 225 ~~~~~~~~~~t~~~~~~~a~~~al~~~~-~~g~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~ 302 (355)
T TIGR03301 225 YMEKTGKWRFTPPTHTVYAFAQALEELE-AEGGVPARIARYRRNRELLVDGLRAL-GFQPLLPERWQSPIIVSFLYPDDP 302 (355)
T ss_pred HhhhcCCCCCCCcHHHHHHHHHHHHHHH-HcccHHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCCCCcEEEEECCCCC
Confidence 11233467777777666665310 01226778889999999999999988 8875533 34567888887420
Q ss_pred CCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 401 GSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
. .+..++.++|.++ ||.+
T Consensus 303 ~---------~~~~~~~~~l~~~-gi~i 320 (355)
T TIGR03301 303 D---------FDFDDFYQELKER-GFVI 320 (355)
T ss_pred c---------chHHHHHHHHHHC-CEEE
Confidence 0 1456888887765 8876
No 162
>PRK06460 hypothetical protein; Provisional
Probab=99.93 E-value=3.9e-24 Score=211.17 Aligned_cols=218 Identities=14% Similarity=0.197 Sum_probs=166.5
Q ss_pred CCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCC----ChHHHHHHcCCEEEE
Q 014172 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV----SYPEMARIADATPVI 205 (429)
Q Consensus 130 ~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~----~~~~~~~~~g~~~~~ 205 (429)
.++...+|++++|++++ ....+++ +++++++..++.+++++||+|+++.|.|. .|...++..|++++.
T Consensus 43 ~~p~~~~L~~~lA~l~g-------~~~~v~~-~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~ 114 (376)
T PRK06460 43 ANPTVLELTKKIVELEN-------AEMGVAF-SSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDA 114 (376)
T ss_pred CCccHHHHHHHHHHHhC-------CCcEEEe-CCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEE
Confidence 34567899999999864 1234555 55568999999999999999999987554 455677889999988
Q ss_pred ecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccc
Q 014172 206 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (429)
Q Consensus 206 v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~ 285 (429)
++.+ +.+.+++.+++++|+|++++|+||||.+++ +++|.++|+++ |++||+|++|.... ...
T Consensus 115 ~~~~-------~~~~l~~~~~~~tklV~l~sp~NPtG~v~d---~~~I~~la~~~-g~~vivDea~~~~~-------~~~ 176 (376)
T PRK06460 115 SNPG-------SDNIIEKAKSKRYDVVFVENITNPLLRVVD---ITELSKVCKEN-GSILIVDATFSTPI-------NQK 176 (376)
T ss_pred ECCC-------CHHHHHHhcCCCceEEEEECCCCCCCcccC---HHHHHHHHHHc-CCEEEEECCcCccc-------cCC
Confidence 8753 234455656778999999999999999999 67899999999 99999999997531 111
Q ss_pred cCCCCCCceEEEeccChhcc-cccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 014172 286 SLPGMWERTLTVNGFSKAFA-MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 364 (429)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~~-~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~ 364 (429)
.+ ..+.++++.|+||.++ ..+.|+||+++++++++.+.+....++.+.+.. .+..++. ..++++.+.++.
T Consensus 177 ~l--~~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~g~~~~~~---~a~~~l~----~~~~l~~r~~~~ 247 (376)
T PRK06460 177 PL--ELGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTLGTSLDPH---AAYLTLR----GIKTLKIRMDVI 247 (376)
T ss_pred hh--hcCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHHhcCCCCCHH---HHHHHHh----chhhHHHHHHHH
Confidence 11 1345699999999985 223679999999999999988777776655543 2334444 357888889999
Q ss_pred HHHHHHHHHHhccCCCce
Q 014172 365 RERRDFLVKSFGELEGVK 382 (429)
Q Consensus 365 ~~~r~~l~~~L~~l~g~~ 382 (429)
.++++.+.+.|++.|.++
T Consensus 248 ~~n~~~l~~~L~~~p~v~ 265 (376)
T PRK06460 248 NRNAEQIAEFLEGHPKVV 265 (376)
T ss_pred HHHHHHHHHHHHcCCCcc
Confidence 999999999999877653
No 163
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.93 E-value=4.1e-24 Score=212.07 Aligned_cols=216 Identities=16% Similarity=0.188 Sum_probs=168.9
Q ss_pred CCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH----HHHHcCCEEEEecC
Q 014172 133 GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVILPT 208 (429)
Q Consensus 133 G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~~ 208 (429)
-..+|++.+++++ | .+++++++|+++++..++.+++++||+|+++.+.|.+... .+...|++++.+++
T Consensus 62 ~~~~le~~la~l~----g----~~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 133 (390)
T PRK08133 62 TVTMFQERLAALE----G----AEACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDL 133 (390)
T ss_pred HHHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECC
Confidence 3467777777775 3 3568999999999999999999999999999999876543 45678999999986
Q ss_pred CCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCC
Q 014172 209 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 288 (429)
Q Consensus 209 ~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~ 288 (429)
+ |++.+++++++++|+|++++|+||||.+.+ +++|+++|++| |++||+|++|....+. .++ .
T Consensus 134 ~-------d~~~l~~~i~~~tklV~ie~p~NptG~v~d---l~~I~~la~~~-gi~livD~t~~~~~~~----~pl-~-- 195 (390)
T PRK08133 134 T-------DLDAWRAAVRPNTKLFFLETPSNPLTELAD---IAALAEIAHAA-GALLVVDNCFCTPALQ----QPL-K-- 195 (390)
T ss_pred C-------CHHHHHHhcCcCCeEEEEECCCCCCCCcCC---HHHHHHHHHHc-CCEEEEECCCcccccC----Cch-h--
Confidence 2 789999999999999999999999999998 89999999999 9999999998753321 111 1
Q ss_pred CCCCceEEEeccChhccccccee-eEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 014172 289 GMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 367 (429)
Q Consensus 289 ~~~~~~i~~~S~SK~~~~~G~R~-G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~ 367 (429)
.+..+++.|+||.++.+|+++ ||+++++++++.+...........+.+.+.. ++.. .+.+..+.+++.++
T Consensus 196 --~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g~~~~~~~a~~---~l~g----l~tl~~R~~~~~~~ 266 (390)
T PRK08133 196 --LGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAGPTLSPFNAWV---FLKG----LETLSLRMEAHSAN 266 (390)
T ss_pred --hCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHHHhCCCCCHHHHHH---HHcc----cchHHHHHHHHHHH
Confidence 234588999999998899998 6677888888777766555554455554333 3332 33566777788889
Q ss_pred HHHHHHHhccCCCcee
Q 014172 368 RDFLVKSFGELEGVKM 383 (429)
Q Consensus 368 r~~l~~~L~~l~g~~~ 383 (429)
+..+.+.|++.|+++.
T Consensus 267 a~~la~~L~~~p~v~~ 282 (390)
T PRK08133 267 ALALAEWLEAHPGVER 282 (390)
T ss_pred HHHHHHHHHhCCCeeE
Confidence 9999999998877653
No 164
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.93 E-value=1.1e-23 Score=210.62 Aligned_cols=300 Identities=13% Similarity=0.161 Sum_probs=208.7
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.+||+..|. ..++. +|++.+++.+.+.+.. .++.. ...+....+++.+.+..+ .+.+++++++++++.
T Consensus 38 dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~-~~~~~-~~~~~~~~l~~~l~~~~~----~~~~~~~~sGseA~e 111 (403)
T PRK05093 38 QGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLW-HISNV-FTNEPALRLAKKLIDATF----AERVFFANSGAEANE 111 (403)
T ss_pred CCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcC-cccCc-cCCHHHHHHHHHHHhhCC----CCEEEEeCchHHHHH
Confidence 577899998873 33443 7899999999886521 12111 122334466666655433 358999999999999
Q ss_pred HHHHHhcC-------CC-CEEEEcCCCCCChHH-HHHHcC------------CEEEEecCCCCCCCCCCHHHHHhhcccC
Q 014172 170 QAVLAVCS-------PG-DEVIIPAPFWVSYPE-MARIAD------------ATPVILPTRISENFLLDPKVLESKLTEK 228 (429)
Q Consensus 170 ~~l~~l~~-------~g-d~Vlv~~p~y~~~~~-~~~~~g------------~~~~~v~~~~~~~~~~d~e~l~~~l~~~ 228 (429)
.+++.... .+ +.|+..+-+|.+... .....| .+++.++. .|++.+++.+.++
T Consensus 112 ~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~ 184 (403)
T PRK05093 112 AAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-------NDLAAVKAVIDDH 184 (403)
T ss_pred HHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-------CCHHHHHHHhcCC
Confidence 98886521 22 567777777776543 222211 11222221 1889999999878
Q ss_pred CcEEEEcCCCCCccCCC--CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccc
Q 014172 229 SRLLILCSPSNPTGSVY--PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (429)
Q Consensus 229 ~~~i~l~~p~NPtG~~~--~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 306 (429)
+++|+++ |.||+|.++ +.+.+++|.++|++| |+++|+||+|.++.+.|.. .+.....-..+ +.||||.++
T Consensus 185 ~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~-g~~lI~DEv~~g~g~~g~~-~~~~~~~~~pd----i~s~sK~l~- 256 (403)
T PRK05093 185 TCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQH-NALLIFDEVQTGMGRTGDL-FAYMHYGVTPD----ILTSAKALG- 256 (403)
T ss_pred eEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCCCccc-hhhhhcCCCCC----EEEeccccc-
Confidence 8888777 788887765 889999999999999 9999999999987666542 22211111112 678999999
Q ss_pred ccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC---Ccee
Q 014172 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE---GVKM 383 (429)
Q Consensus 307 ~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~---g~~~ 383 (429)
+|+|+||+++++++++.+.......+++.+.+.|.++.++|+. .. -.+..+.++++++++.+.|+++. ++-.
T Consensus 257 ~G~rig~vv~~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~---~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 331 (403)
T PRK05093 257 GGFPIGAMLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDI---IN--TPEVLEGVKARRQRFVDGLQKINQKYGVFS 331 (403)
T ss_pred CCcceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHH---Hh--hccHHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence 9999999999999998887654555667899999999998864 11 23556889999999999998851 2222
Q ss_pred ecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 384 SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 384 ~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
..+.+|+++|+.++... ..++.+|+++|+++ ||.+
T Consensus 332 ~~~~~G~~~~~~l~~~~---------~~~~~~~~~~l~~~-Gv~v 366 (403)
T PRK05093 332 EIRGMGLLIGAELKPQY---------KGRARDFLNAAAEE-GVMV 366 (403)
T ss_pred eEeeCceEEEEEecCcc---------hhHHHHHHHHHHHC-CeEE
Confidence 34566888999986420 01467899999887 7875
No 165
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.93 E-value=7.3e-24 Score=210.21 Aligned_cols=219 Identities=13% Similarity=0.139 Sum_probs=164.7
Q ss_pred CCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHH----HHcCCEEEE
Q 014172 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVI 205 (429)
Q Consensus 130 ~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~ 205 (429)
+++...+|++.+|++++ . +..+++++++.++..++.+++++||+|+++.|.|......+ ...|+++..
T Consensus 59 ~~pt~~~Le~~lA~l~G-------~-~~al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~ 130 (386)
T PRK06767 59 GNPTVKLFEERMAVLEG-------G-EEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSF 130 (386)
T ss_pred CCcchHHHHHHHHHHhC-------C-CcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEE
Confidence 55567889999998863 2 34555566677899999999999999999999888765543 334666655
Q ss_pred ecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccc
Q 014172 206 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (429)
Q Consensus 206 v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~ 285 (429)
++. .|++.+++++++++++|++++|+||||.+++ +++|.++|+++ |+++|+|++|....+. .++
T Consensus 131 ~~~-------~d~~~l~~~i~~~tklV~lesp~NptG~v~d---l~~I~~la~~~-g~~vivD~a~a~~~~~----~pl- 194 (386)
T PRK06767 131 CDM-------ETEADIENKIRPNTKLIFVETPINPTMKLID---LKQVIRVAKRN-GLLVIVDNTFCSPYLQ----RPL- 194 (386)
T ss_pred eCC-------CCHHHHHHhhCcCceEEEEeCCCCCCceecC---HHHHHHHHHHc-CCEEEEECCCcccccC----Cch-
Confidence 543 3889999999989999999999999999999 89999999999 9999999999743221 111
Q ss_pred cCCCCCCceEEEeccChhccccccee-eEEEcCHHHHHHHHH-HhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHH
Q 014172 286 SLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVAACNK-IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (429)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~~~~G~R~-G~v~~~~~~~~~l~~-~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~ 363 (429)
. .+..+++.|+||.++.+|+|+ ||+++++++++.+.+ .........+.+.+.++...|+ .+..+.++
T Consensus 195 ~----~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~-------tl~~r~~~ 263 (386)
T PRK06767 195 E----LGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGIMAPFDAWLLLRGLK-------TLAVRMDR 263 (386)
T ss_pred h----cCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCC-------cHHHHHHH
Confidence 1 234588999999998889985 999999988777643 3333444455555444333333 34556778
Q ss_pred HHHHHHHHHHHhccCCCcee
Q 014172 364 FRERRDFLVKSFGELEGVKM 383 (429)
Q Consensus 364 ~~~~r~~l~~~L~~l~g~~~ 383 (429)
.+++...+.+.|+++|+++.
T Consensus 264 ~~~~a~~la~~L~~~p~v~~ 283 (386)
T PRK06767 264 HCDNAEKIVSFLKNHDAVEG 283 (386)
T ss_pred HHHHHHHHHHHHHcCCCccE
Confidence 88999999999999998864
No 166
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.93 E-value=1.2e-23 Score=208.70 Aligned_cols=304 Identities=15% Similarity=0.186 Sum_probs=210.7
Q ss_pred hcCCCeEEcCCCCC--CCC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 92 QAGVSVIRLAAGEP--DFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 92 ~~g~~~i~L~~g~~--~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
..|+..+|+..|.. .++ .+|++.+++.+++++... . ......++++++++++.+..+ .+.+++++++++++
T Consensus 26 ~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~-~-~~~~~~~~~~~la~~l~~~~~----~~~~~~~~sG~~a~ 99 (377)
T PRK02936 26 NNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWH-V-SNLFTNSLQEEVASLLAENSA----GDLVFFCNSGAEAN 99 (377)
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccc-c-ccccCCHHHHHHHHHHHhcCC----CCEEEEeCCcHHHH
Confidence 35778999998873 233 378999999999876322 2 233557899999999986544 25899999999999
Q ss_pred HHHHHHhc-CCC-CEEEEcCCCCCChHH-HHHHcCCEEE---EecCCCCCCCC--CCHHHHHhhcccCCcEEEEcCCCCC
Q 014172 169 LQAVLAVC-SPG-DEVIIPAPFWVSYPE-MARIADATPV---ILPTRISENFL--LDPKVLESKLTEKSRLLILCSPSNP 240 (429)
Q Consensus 169 ~~~l~~l~-~~g-d~Vlv~~p~y~~~~~-~~~~~g~~~~---~v~~~~~~~~~--~d~e~l~~~l~~~~~~i~l~~p~NP 240 (429)
..+++... .+| +.|++.+++|++... .....+.... ..|..++..+. .|++.+++.+.+++++|++..++++
T Consensus 100 ~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~~~ 179 (377)
T PRK02936 100 EAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQGE 179 (377)
T ss_pred HHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEEecccCC
Confidence 99988542 344 679999998885432 3333332111 11111110000 1789999999888999999999999
Q ss_pred ccCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHH
Q 014172 241 TGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH 319 (429)
Q Consensus 241 tG~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~ 319 (429)
+|.. .+.+.+++|.++|++| |+++|+||+|.++.+.|. ...+..+.. ... +.+|||.++ +|+|+||++++++
T Consensus 180 ~G~~~~~~~~l~~l~~l~~~~-~~~lI~DEv~~g~g~~g~-~~~~~~~~~-~~d---i~t~sK~l~-~G~~ig~v~~~~~ 252 (377)
T PRK02936 180 GGVIPADPAFLQEVQTLCKKF-GALLIIDEVQTGIGRTGT-LFAYEQFGL-DPD---IVTVAKGLG-NGIPVGAMIGKKE 252 (377)
T ss_pred CCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCch-hhHHHhhCC-CCc---EEEEccccc-CCCccEEEEEcHH
Confidence 9876 5789999999999999 999999999998766553 212222211 111 347999999 9999999999999
Q ss_pred HHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc----CCCceeecCCceEEEEEe
Q 014172 320 FVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE----LEGVKMSEPQGAFYLFID 395 (429)
Q Consensus 320 ~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----l~g~~~~~p~~~~~~~~~ 395 (429)
+++.+.......+++.+.++|.++.++|+.. . -+..++.++++++++.+.|++ ++.+..+.+ .|+++|++
T Consensus 253 ~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~---~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~-~g~~~~i~ 326 (377)
T PRK02936 253 LGTAFGPGSHGSTFGGNPLAMAAAKEVLQVI---K--QPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRG-KGLMIGIE 326 (377)
T ss_pred HHhhccCCCCCCCCCCCHHHHHHHHHHHHHH---H--hccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEee-cceEEEEE
Confidence 9988865544556678999999999999752 1 123445566666666666655 333333334 45789999
Q ss_pred cCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 396 FSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 396 l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++. +...+.+.|.++ ||.+
T Consensus 327 ~~~-------------~~~~~~~~l~~~-gv~v 345 (377)
T PRK02936 327 CTE-------------EVAPVIEQLREE-GLLV 345 (377)
T ss_pred ecc-------------hHHHHHHHHHHC-CeEE
Confidence 863 356777776554 8765
No 167
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.93 E-value=3.7e-23 Score=204.13 Aligned_cols=194 Identities=23% Similarity=0.329 Sum_probs=152.5
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCEEEEcCCC
Q 014172 110 PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPF 188 (429)
Q Consensus 110 p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l-~~~gd~Vlv~~p~ 188 (429)
.++..+++.+.+.++.. + |...+++++++++.+.+| .+++++|+|+++++.+++.++ ++|||+|+++.++
T Consensus 10 ~~~e~~a~~~~~~~~~~-~----~~g~~~~~~e~~la~~~g----~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t 80 (376)
T TIGR02379 10 TGQELEYIAEAISEGKL-S----GDGPFSRRCETWLENRTG----TKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYT 80 (376)
T ss_pred CHHHHHHHHHHHHcCCc-c----CCcHHHHHHHHHHHHHhC----CCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCC
Confidence 45568888888876532 2 223567777777776655 468999999999999998887 8999999999999
Q ss_pred CCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEc
Q 014172 189 WVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 268 (429)
Q Consensus 189 y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~D 268 (429)
|..+...+...|++++.+++++ +++.+|++.+++++++++|+|+ |+||+|...+ +++|.++|++| |++||+|
T Consensus 81 ~~~~~~~~~~~G~~~v~vd~d~-~~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~d---~~~I~~la~~~-~i~vIeD 152 (376)
T TIGR02379 81 FVSTANAFVLRGAKIVFVDIRP-DTMNIDETLIESAITHRTKAIV---PVHYAGVACD---MDTIMALANKH-QLFVIED 152 (376)
T ss_pred cHHHHHHHHHcCCEEEEEecCC-CcCCCCHHHHHHhcCcCceEEE---EeCCCCCccC---HHHHHHHHHHC-CCEEEEE
Confidence 9999999999999999999975 4478999999999999999986 6788999998 88999999999 9999999
Q ss_pred cCCcccc-cCCCCCCccccCCCCCCceEEEecc--ChhcccccceeeEEEcC-HHHHHHHHHHhh
Q 014172 269 EIYEHII-YAPATHTSFASLPGMWERTLTVNGF--SKAFAMTGWRLGYIAGP-KHFVAACNKIQS 329 (429)
Q Consensus 269 eay~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~--SK~~~~~G~R~G~v~~~-~~~~~~l~~~~~ 329 (429)
++|+.+. |.+....+ +. .+.+.|| +|.+. +|.+.|+++++ +++.+.++..+.
T Consensus 153 aa~~~g~~~~~~~~g~---~~-----~~~~fSf~~~K~l~-~g~~gG~v~~~~~~~~~~~~~~~~ 208 (376)
T TIGR02379 153 AAQGVMSTYKGRALGS---IG-----HLGTFSFHETKNYT-SGGEGGALLINDQAFIERAEIIRE 208 (376)
T ss_pred CccccCCccCCcccCC---CC-----CEEEEeCCCCCcCc-ccCCceEEEECCHHHHHHHHHHHH
Confidence 9999764 54432211 11 1334444 37786 78789998875 778888776543
No 168
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.93 E-value=1.4e-23 Score=209.33 Aligned_cols=297 Identities=14% Similarity=0.177 Sum_probs=207.3
Q ss_pred cCCCeEEcCCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~~~--~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..+|+..|... ++- +|.+.+++.+.+++... ++. ....+....+++.+.+..+ .+.+++++++++++.
T Consensus 38 ~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~-~~~-~~~~~~~~~l~~~l~~~~~----~~~~~~~~SGseA~e 111 (396)
T PRK04073 38 EGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTL-TSR-AFHSDQLGPWYEKVAKLTG----KDMVLPMNTGAEAVE 111 (396)
T ss_pred CCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccc-ccc-ccCCHHHHHHHHHHHhcCC----CCeEEEcCChHHHHH
Confidence 57889999887633 333 78999999998875321 111 1122344555555554333 368999999999999
Q ss_pred HHHHHhcC---------CC-CEEEEcCCCCCChH-HHHHHcCCE------------EEEecCCCCCCCCCCHHHHHhhcc
Q 014172 170 QAVLAVCS---------PG-DEVIIPAPFWVSYP-EMARIADAT------------PVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 170 ~~l~~l~~---------~g-d~Vlv~~p~y~~~~-~~~~~~g~~------------~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
.+++.... +| +.|+..+-+|.+.. ..+...+.. +..++. .|++.+++.++
T Consensus 112 ~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~ 184 (396)
T PRK04073 112 TAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-------GDLEALKAAIT 184 (396)
T ss_pred HHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-------CCHHHHHHhcc
Confidence 98887631 34 67888877777644 333333321 122221 27899999998
Q ss_pred cCCcEEEEcCCCCCccCCCCHH-HHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcc
Q 014172 227 EKSRLLILCSPSNPTGSVYPKN-LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 305 (429)
Q Consensus 227 ~~~~~i~l~~p~NPtG~~~~~~-~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 305 (429)
+++++|+++.++||||.+++.+ .+++|.++|++| |+++|+||+|.++.+.+... . .+.. +...-+.+|||.+|
T Consensus 185 ~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~-g~lli~DEv~~g~g~~g~~~-~-~~~~---~~~pdi~~~sK~lg 258 (396)
T PRK04073 185 PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEE-NVLFIADEIQTGLGRTGKLF-A-CDWD---NVTPDMYILGKALG 258 (396)
T ss_pred cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEecchhCCCcCcHHH-H-hhhc---CCCCCEEEeccccc
Confidence 8899999999999999998765 699999999999 99999999999865544211 1 1111 11122456899999
Q ss_pred cccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC--CCcee
Q 014172 306 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL--EGVKM 383 (429)
Q Consensus 306 ~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l--~g~~~ 383 (429)
++|+|+||+++++++++.+.......+++.+.+++.++.++|+. .++ +.+.+..+++++++.+.|+++ +++..
T Consensus 259 ~gg~~ig~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~---~~~--~~l~~~~~~~~~~l~~~L~~l~~~~i~~ 333 (396)
T PRK04073 259 GGVFPISCVAANRDILGVFTPGSHGSTFGGNPLACAVSIAALEV---LEE--EKLPERSLELGEYFKEQLKEIDNPMIKE 333 (396)
T ss_pred CCCCcceEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHH---HHh--cCHHHHHHHHHHHHHHHHHhhcCCcccc
Confidence 88899999999999998886554555667899999999999974 111 234466677888899988876 33444
Q ss_pred ecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 384 SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 384 ~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.++.| .|++++++. ++.+++++|+++ ||.+
T Consensus 334 ~~~~g-~~~~~~~~~-------------~~~~~~~~l~~~-Gv~~ 363 (396)
T PRK04073 334 VRGRG-LFIGVELNE-------------PARPYCEALKEE-GLLC 363 (396)
T ss_pred eecce-EEEEEEecc-------------hHHHHHHHHHHC-CeEE
Confidence 45555 557888752 467899998876 8876
No 169
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=8.8e-24 Score=209.82 Aligned_cols=218 Identities=16% Similarity=0.176 Sum_probs=170.6
Q ss_pred CCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH----HHHHcCCEEEE
Q 014172 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVI 205 (429)
Q Consensus 130 ~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~ 205 (429)
+.+...+|++.++++++ .+.+++++++++++..++.+++++||+|+++.|+|.+... .+...|++++.
T Consensus 62 ~~p~~~~le~~lA~l~g--------~~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~ 133 (398)
T PRK08249 62 TNPTVQAFEEKVRILEG--------AEAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTL 133 (398)
T ss_pred CChHHHHHHHHHHHHhC--------CCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEE
Confidence 34456788888888863 3456777777899999999999999999999999987543 45578999887
Q ss_pred ecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccc
Q 014172 206 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (429)
Q Consensus 206 v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~ 285 (429)
++. .|++.+++++++++++|++++|+||||.+++ +++|.++|++| ++++|+|++|....+.. ++
T Consensus 134 vd~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~v~d---l~~I~~la~~~-gi~livD~t~a~~~~~~----~l- 197 (398)
T PRK08249 134 CET-------GDHEQIEAEIAKGCDLLYLETPTNPTLKIVD---IERLAAAAKKV-GALVVVDNTFATPINQN----PL- 197 (398)
T ss_pred cCC-------CCHHHHHHhcCCCCeEEEEECCCCCCCccCC---HHHHHHHHHHc-CCEEEEECCcCccccCC----ch-
Confidence 763 4899999999999999999999999999999 88899999999 99999999998643221 11
Q ss_pred cCCCCCCceEEEeccChhccccccee-eEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 014172 286 SLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 364 (429)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~~~~G~R~-G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~ 364 (429)
. .+..+++.|+||.++.+|.++ ||+++++++++.+.........+.+.+.+..+...++ .+....++.
T Consensus 198 ~----~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~-------tL~~R~~~~ 266 (398)
T PRK08249 198 A----LGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYREINGATMDPMSAYLILRGMK-------TLKLRVRQQ 266 (398)
T ss_pred h----hCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhCcc-------hHHHHHHHH
Confidence 1 233488899999998667665 7778888999988877776666677776665554443 355666777
Q ss_pred HHHHHHHHHHhccCCCce
Q 014172 365 RERRDFLVKSFGELEGVK 382 (429)
Q Consensus 365 ~~~r~~l~~~L~~l~g~~ 382 (429)
.+++..+.+.|++.|.++
T Consensus 267 ~~na~~la~~L~~~p~v~ 284 (398)
T PRK08249 267 QESAMALAKYLQTHPKVE 284 (398)
T ss_pred HHHHHHHHHHHHcCCCee
Confidence 888888889998876654
No 170
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.93 E-value=1.5e-23 Score=208.25 Aligned_cols=256 Identities=16% Similarity=0.186 Sum_probs=183.6
Q ss_pred EcCCCC-CCCCChHHHHHHHHHHHHc-------CCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHH
Q 014172 99 RLAAGE-PDFDTPVLIAEAGINAIRE-------GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQ 170 (429)
Q Consensus 99 ~L~~g~-~~~~~p~~v~~a~~~~~~~-------~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~ 170 (429)
+|+.++ -.+..+|++.+++.+++++ ....|+...+..+|++++|++++ .++.+++++|.++.+ .
T Consensus 2 ~f~s~dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g-------~e~al~~~sG~~a~~-~ 73 (392)
T PLN03227 2 NFATHDFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLG-------TESAILYSDGASTTS-S 73 (392)
T ss_pred CCcCcCccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhC-------CCcEEEecCcHHHHH-H
Confidence 555555 5666788999999999875 22346655667788888888874 346777888877766 5
Q ss_pred HHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc-----------cCCcEEEEcCCCC
Q 014172 171 AVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT-----------EKSRLLILCSPSN 239 (429)
Q Consensus 171 ~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~-----------~~~~~i~l~~p~N 239 (429)
++.+++++||.|+++++.|.++...+...+++++.++.+..+ +++.+.+.+. +++++|++.+++|
T Consensus 74 ~i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~~----~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~ 149 (392)
T PLN03227 74 TVAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWFRHNDMK----DLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYK 149 (392)
T ss_pred HHHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCCHH----HHHHHHHHhhhhccccccccCCCcEEEEEcCCcC
Confidence 788899999999999999999998888889988888764211 3444444442 3578899999999
Q ss_pred CccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccc--cCCCCCCceEEEeccChhcccccceeeEEEcC
Q 014172 240 PTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA--SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP 317 (429)
Q Consensus 240 PtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~--~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~ 317 (429)
|+|.+.+ +++|.++|++| |+++|+||+|....++..+..... .+....+.+|++.|+||.+| ++.||++++
T Consensus 150 ~~G~i~~---l~~i~~l~~~~-g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g---~~gg~v~~~ 222 (392)
T PLN03227 150 NTGTLAP---LKELVALKEEF-HYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG---SVGGMTVGS 222 (392)
T ss_pred CCCcccC---HHHHHHHHHHc-CCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhh---ccCcEEecC
Confidence 9999999 88999999999 999999999983323221111111 12222456799999999876 455999999
Q ss_pred HHHHHHHHHHhhcccCCC--chHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 014172 318 KHFVAACNKIQSQFTSGA--SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 377 (429)
Q Consensus 318 ~~~~~~l~~~~~~~~~~~--~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 377 (429)
+++++.+.......+++. +++.+.++.+++.. ..+ .++++++++++.+++.+.|++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~---~~~-~~~~~~~l~~~~~~l~~~L~~ 280 (392)
T PLN03227 223 EEVVDHQRLSGSGYCFSASAPPFLAKADATATAG---ELA-GPQLLNRLHDSIANLYSTLTN 280 (392)
T ss_pred HHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHH---Hhc-CHHHHHHHHHHHHHHHHHHHh
Confidence 998887765433333333 35566666666653 111 345677888899999999875
No 171
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=1.7e-23 Score=206.96 Aligned_cols=222 Identities=14% Similarity=0.168 Sum_probs=175.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHH----HHcC
Q 014172 125 FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIAD 200 (429)
Q Consensus 125 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g 200 (429)
+.+| +++....|++++|++.+ .+++++++|+++++..++.+++++||+|++++|+|.+....+ ...|
T Consensus 46 Y~R~-~~pt~~~L~~~lA~l~g--------~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~g 116 (386)
T PRK08045 46 YSRR-GNPTRDVVQRALAELEG--------GAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGC 116 (386)
T ss_pred eeCC-CCccHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCC
Confidence 3455 45567788888888853 246999999999999999999999999999999999643322 2234
Q ss_pred CEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCC
Q 014172 201 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 280 (429)
Q Consensus 201 ~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~ 280 (429)
.++..++. .|++.+++++++++++|++++|+||||.+++ +++|.++|+++ +++||+|++|....+
T Consensus 117 i~v~~vd~-------~d~e~l~~~l~~~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~-g~~vivDeay~~~~~---- 181 (386)
T PRK08045 117 YRVLFVDQ-------GDEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREA-GAVSVVDNTFLSPAL---- 181 (386)
T ss_pred eEEEEeCC-------CCHHHHHHhcccCCeEEEEECCCCCCCEecC---HHHHHHHHHHc-CCEEEEECCCCcccc----
Confidence 46666541 5899999999989999999999999999999 88999999999 999999999986432
Q ss_pred CCccccCCCCCCceEEEeccChhcc-cccceeeEEEc-CHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHH
Q 014172 281 HTSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 358 (429)
Q Consensus 281 ~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~R~G~v~~-~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~ 358 (429)
..++ . .+..+++.|++|.++ ..+.+.|++++ ++++++.+.......+.+.+.+.+..+...|+. +.
T Consensus 182 ~~pl-~----~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~t-------l~ 249 (386)
T PRK08045 182 QNPL-A----LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRT-------LV 249 (386)
T ss_pred CCch-h----hCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhcc-------HH
Confidence 1122 1 233489999999995 55678999877 578888888777777888888888877777764 66
Q ss_pred HHHHHHHHHHHHHHHHhccCCCce
Q 014172 359 KMVKAFRERRDFLVKSFGELEGVK 382 (429)
Q Consensus 359 ~~~~~~~~~r~~l~~~L~~l~g~~ 382 (429)
.++++..+++..+.+.|++.|.++
T Consensus 250 ~R~~~~~~na~~la~~L~~~p~v~ 273 (386)
T PRK08045 250 PRMELAQRNAQAIVKYLQTQPLVK 273 (386)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEe
Confidence 777888888999999999887664
No 172
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.92 E-value=1.6e-23 Score=210.88 Aligned_cols=315 Identities=17% Similarity=0.208 Sum_probs=213.2
Q ss_pred hcCCCeEEcCCCCCCC--C-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 92 QAGVSVIRLAAGEPDF--D-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 92 ~~g~~~i~L~~g~~~~--~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
..|+..+|+..|.... + .++.+.+++.+++.+....+.+..+..+|+++|++++. ..++|++++|+++++
T Consensus 45 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~lae~l~~~~~-------~~~~v~~~~sGseA~ 117 (423)
T TIGR00713 45 VDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGTSYGAPTEAEILLAKEIISRVP-------SVEMVRFVNSGTEAT 117 (423)
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhCC-------cccEEEEeCCHHHHH
Confidence 3578899999988553 3 37999999999987654323356677889999988753 236899999999999
Q ss_pred HHHHHHhc--CCCCEEEEcCCCCCChHHHHHH---cCCEEEEecCCCC-------CCC---CCCHHHHHhhcc---cCCc
Q 014172 169 LQAVLAVC--SPGDEVIIPAPFWVSYPEMARI---ADATPVILPTRIS-------ENF---LLDPKVLESKLT---EKSR 230 (429)
Q Consensus 169 ~~~l~~l~--~~gd~Vlv~~p~y~~~~~~~~~---~g~~~~~v~~~~~-------~~~---~~d~e~l~~~l~---~~~~ 230 (429)
..+++... ...++|+..+++|.++...+.. .|......+..+. +.. ..|++.+++.+. ++++
T Consensus 118 e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~a 197 (423)
T TIGR00713 118 MSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIA 197 (423)
T ss_pred HHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEE
Confidence 99888643 2458999999999997654332 1111111111100 000 017899998886 5678
Q ss_pred EEEE-cCCCCCccCCCC-HHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccccc
Q 014172 231 LLIL-CSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG 308 (429)
Q Consensus 231 ~i~l-~~p~NPtG~~~~-~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 308 (429)
+|++ +.|+| +|.+.+ ++.+++|.++|++| |+++|+||+|.++.++........... .+ +.+|||.++ +|
T Consensus 198 avi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~-~~llI~DEv~~g~r~g~~~~~~~~~~~--pD----i~t~sK~l~-~G 268 (423)
T TIGR00713 198 GVIVEPVAGN-MGVVPPKPEFLAGLRALTEEY-GSLLIFDEVMTGFRVALGGAQEYFGVE--PD----LTTLGKIIG-GG 268 (423)
T ss_pred EEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHh-CCEEEEEccccccccCcchhHHHhCCC--cc----hhhhhhhhc-CC
Confidence 8887 58888 798887 58899999999999 999999999998855322111111121 12 447999999 99
Q ss_pred ceeeEEEcCHHHHHHHHHH---hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCcee-e
Q 014172 309 WRLGYIAGPKHFVAACNKI---QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM-S 384 (429)
Q Consensus 309 ~R~G~v~~~~~~~~~l~~~---~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~-~ 384 (429)
+|+||+++++++++.+... ....+++.+.+++.++.++|+.-. .+.++++.++..+..++.+.+.+++. ++.. .
T Consensus 269 ~pig~v~~~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v 346 (423)
T TIGR00713 269 LPVGAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLD-EEGVYTELDELAKRLAEGLSEVLEDT-GIPHTV 346 (423)
T ss_pred CceeeeeEHHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHHHHHhc-CCCeEE
Confidence 9999999999999888632 233456789999999999887421 12367788888888888888888877 5433 2
Q ss_pred cCCceEE-EEEecCCccCCcccCCCCCCC---hHHHHHHHHHhCCeec
Q 014172 385 EPQGAFY-LFIDFSTYYGSEAEGFGKIEN---SESLCRYLLDKAQVLL 428 (429)
Q Consensus 385 ~p~~~~~-~~~~l~~~~~~~~~~~~~~~~---~~~~~~~Ll~~~gV~v 428 (429)
.+.|+|+ +++..+..... ... ...+ ...+++.|+++ ||.+
T Consensus 347 ~~~g~~~~v~~~~~~~~~~-~~~--~~~~~~~~~~~~~~l~~~-Gv~v 390 (423)
T TIGR00713 347 NRVGSMFSLFFTEEEVTNY-ADA--KKSDTELFAKFFHEMLDK-GVFL 390 (423)
T ss_pred EeeccEEEEEEecCCCCCh-hhh--hcccHHHHHHHHHHHHHC-CeEE
Confidence 3455553 33543221000 000 0001 23688888875 8876
No 173
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.92 E-value=3e-23 Score=206.26 Aligned_cols=249 Identities=16% Similarity=0.214 Sum_probs=178.1
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcC--CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREG--FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~ 173 (429)
+.|.++.+... +.+.++.+..... ..+ +.+| +++-..+|++.+|++++ .+..+++++++.++..++.
T Consensus 30 ~pi~~~~~~~~-~~~~~~~~~~~~~-~~~~~y~r~-~~p~~~~Le~~lA~l~G--------~~~~~~~~sG~~Ai~~~l~ 98 (398)
T PRK07504 30 EALFLTQGFVY-DTAEAAEARFKGE-DPGFIYSRY-SNPTVDMFEKRMCALEG--------AEDARATASGMAAVTAAIL 98 (398)
T ss_pred CCeECCCCccC-CCHHHHHHHhccC-cCCceeecC-CCchHHHHHHHHHHHhC--------CCeeeEecCHHHHHHHHHH
Confidence 45888877643 2344444322111 111 2344 44556788999998863 2234557788888888888
Q ss_pred HhcCCCCEEEEcCCCCCChHHH----HHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHH
Q 014172 174 AVCSPGDEVIIPAPFWVSYPEM----ARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNL 249 (429)
Q Consensus 174 ~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~ 249 (429)
+++++||+|+++.|.|..+... +...|++++.++. +|++.+++++++++|+|++++|+||||.+++
T Consensus 99 ~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~-------~d~e~l~~ai~~~tklV~lesp~NptG~v~d--- 168 (398)
T PRK07504 99 CQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDG-------LDLDNWEKAVRPNTKVFFLESPTNPTLEVID--- 168 (398)
T ss_pred HHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCcEecC---
Confidence 8899999999999999986544 3457899888852 6899999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceee-EEEcCHHHHH-HHHHH
Q 014172 250 LDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLG-YIAGPKHFVA-ACNKI 327 (429)
Q Consensus 250 l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G-~v~~~~~~~~-~l~~~ 327 (429)
+++|.++|+++ |+++|+|++|....+. .++ . .+.++++.|++|.++.+|+|+| +++++++++. .+...
T Consensus 169 l~~I~~la~~~-gi~lvvD~a~a~~~~~----~~~-~----~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~ 238 (398)
T PRK07504 169 IAAVAKIANQA-GAKLVVDNVFATPLFQ----KPL-E----LGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDY 238 (398)
T ss_pred HHHHHHHHHHc-CCEEEEECCccccccC----Cch-h----hCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHH
Confidence 89999999999 9999999999864432 111 1 2456899999999988999996 6667777664 34444
Q ss_pred hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCce
Q 014172 328 QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK 382 (429)
Q Consensus 328 ~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~ 382 (429)
......+++.+....+...|+ .+..+.++..++...+.+.|++.|++.
T Consensus 239 ~~~~g~~~s~~~A~~~l~~L~-------tl~~R~~~~~~na~~la~~L~~~p~v~ 286 (398)
T PRK07504 239 FRHTGPSLSPFNAWTLLKGLE-------TLPVRVRQQTESAAAIADFLAGHPKVA 286 (398)
T ss_pred HHHhCCCCCHHHHHHHHhccc-------hHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 444454556655554444443 355666666788888888888877654
No 174
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.92 E-value=2.7e-23 Score=205.35 Aligned_cols=222 Identities=14% Similarity=0.179 Sum_probs=170.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHH----HHcC
Q 014172 125 FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIAD 200 (429)
Q Consensus 125 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g 200 (429)
+.+| +++...+|+++++++.+ .+++++++|+++++.+++.+++++||+|+++.|+|.++...+ ...|
T Consensus 45 Y~R~-~~p~~~~le~~lA~l~g--------~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~ 115 (382)
T TIGR02080 45 YSRS-GNPTRDLLQQALAELEG--------GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGC 115 (382)
T ss_pred ccCC-CCchHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcC
Confidence 4556 45566888888888762 368999999999999999999999999999999998654432 2334
Q ss_pred CEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCC
Q 014172 201 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 280 (429)
Q Consensus 201 ~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~ 280 (429)
.++..++. .|++.+++++++++|+|++++|+||||.+++ +++|.++|+++ +++||+|++|..+.+.
T Consensus 116 ~~v~~~d~-------~d~~~l~~ai~~~tklV~l~~p~NPtG~~~d---l~~I~~la~~~-g~~vvvD~a~~~~~~~--- 181 (382)
T TIGR02080 116 FRVLFVDQ-------GDEQALRAALAQKPKLVLIETPSNPLLRVVD---IAKICHLAKAV-GAVVVVDNTFLSPALQ--- 181 (382)
T ss_pred eEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCEecC---HHHHHHHHHHc-CCEEEEECCCcccccC---
Confidence 56655531 3899999999989999999999999999999 88899999999 9999999999864321
Q ss_pred CCccccCCCCCCceEEEeccChhcc-cccceeeEEEc-CHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHH
Q 014172 281 HTSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 358 (429)
Q Consensus 281 ~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~R~G~v~~-~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~ 358 (429)
.++ .+ +..++++|+||.++ .+|.+.|++++ ++++++.+.......+.+.+.+....+...+ +.+.
T Consensus 182 -~pl-~~----gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l-------~tl~ 248 (382)
T TIGR02080 182 -NPL-AL----GADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLRGL-------RTLV 248 (382)
T ss_pred -Cch-hh----CCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHccc-------chHH
Confidence 111 11 23489999999985 56789999876 6788888887777767777777665543333 3355
Q ss_pred HHHHHHHHHHHHHHHHhccCCCce
Q 014172 359 KMVKAFRERRDFLVKSFGELEGVK 382 (429)
Q Consensus 359 ~~~~~~~~~r~~l~~~L~~l~g~~ 382 (429)
.+.++..++...+.+.|++.|.++
T Consensus 249 ~R~~~~~~na~~~a~~L~~~p~v~ 272 (382)
T TIGR02080 249 ARMRLQQRNAQAIVEYLQTQPLVK 272 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCee
Confidence 556677788888888888876654
No 175
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.92 E-value=1.3e-22 Score=200.92 Aligned_cols=277 Identities=18% Similarity=0.279 Sum_probs=192.7
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCEEEEcCCCC
Q 014172 111 VLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFW 189 (429)
Q Consensus 111 ~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l-~~~gd~Vlv~~p~y 189 (429)
++-.+++.+.+..+. .| |..++++++++++++.+| .+++++++|+++++.+++.++ +++||+|+++.|+|
T Consensus 11 ~~~~~~~~~~l~~~~-~~----g~~~~~~~~e~~la~~~g----~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~ 81 (375)
T PRK11706 11 GTELDYIQQAMSSGK-LC----GDGGFTRRCQQWLEQRFG----SAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTF 81 (375)
T ss_pred HHHHHHHHHHHHcCC-cc----CCCHHHHHHHHHHHHHhC----CCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCc
Confidence 444677777776543 22 334677888777777665 368999999999999887766 68999999999999
Q ss_pred CChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEcc
Q 014172 190 VSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDE 269 (429)
Q Consensus 190 ~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~De 269 (429)
.++...+...|++++.+++++ +++.+|++++++++++++++|+++ |++|...+ +++|.++|++| |++||+|+
T Consensus 82 ~~~~~~~~~~G~~~v~~d~d~-~~~~~d~~~le~~i~~~tk~i~~~---~~~G~~~~---~~~i~~la~~~-~i~vIeD~ 153 (375)
T PRK11706 82 VSTANAFVLRGAKIVFVDIRP-DTMNIDETLIEAAITPKTRAIVPV---HYAGVACE---MDTIMALAKKH-NLFVVEDA 153 (375)
T ss_pred HHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhcCCCCeEEEEe---CCCCCccC---HHHHHHHHHHc-CCEEEEEC
Confidence 999999999999999999875 447899999999999999999865 46999888 88999999999 99999999
Q ss_pred CCcccc-cCCCCCCccccCCCCCCceEEEeccC--hhcccccceeeEEEcCHHHHHHHHHHhhcc---------------
Q 014172 270 IYEHII-YAPATHTSFASLPGMWERTLTVNGFS--KAFAMTGWRLGYIAGPKHFVAACNKIQSQF--------------- 331 (429)
Q Consensus 270 ay~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~~~~G~R~G~v~~~~~~~~~l~~~~~~~--------------- 331 (429)
+|+.+. +++.. +..+. .+.+.||+ |.++ +|.+.++++.++++.+.++..+...
T Consensus 154 a~a~g~~~~~~~---~g~~~-----~~~~~Sf~~~K~l~-~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 224 (375)
T PRK11706 154 AQGVMSTYKGRA---LGTIG-----HIGCFSFHETKNYT-AGEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYT 224 (375)
T ss_pred ccccccccCCee---eecCc-----CEEEEeCCCCcccc-ccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcce
Confidence 999765 33321 22221 24455555 9997 6888888888899888776654321
Q ss_pred --cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC--C-ceee-cCC----ceEEEEEecCCccC
Q 014172 332 --TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE--G-VKMS-EPQ----GAFYLFIDFSTYYG 401 (429)
Q Consensus 332 --~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~--g-~~~~-~p~----~~~~~~~~l~~~~~ 401 (429)
..+.+...+....+.... ..+.+++..++.+++.+.+.+.|+.++ | +.+. .+. ..++.|+.++..
T Consensus 225 ~~~~g~~~~~~~~~aa~~~~---ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 299 (375)
T PRK11706 225 WVDIGSSYLPSELQAAYLWA---QLEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDL-- 299 (375)
T ss_pred eeecccccCcCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCc--
Confidence 012222111111111110 123356666666677777778887765 2 4322 122 123456666532
Q ss_pred CcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 402 SEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+..++.+.|.++ ||.+
T Consensus 300 ---------~~r~~l~~~L~~~-gI~~ 316 (375)
T PRK11706 300 ---------EDRSALINFLKEA-GIMA 316 (375)
T ss_pred ---------CCHHHHHHHHHHC-CCCc
Confidence 2578888888776 8864
No 176
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.92 E-value=4e-23 Score=204.52 Aligned_cols=222 Identities=16% Similarity=0.233 Sum_probs=171.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCCh----HHHHHHcCC
Q 014172 126 TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSY----PEMARIADA 201 (429)
Q Consensus 126 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~----~~~~~~~g~ 201 (429)
.+| +++-..+|++.+++++ | .+.+++++++++++..++.+++++||+|+++.+.|.+. ...++..|+
T Consensus 49 ~r~-~~p~~~~le~~la~l~----g----~~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~ 119 (380)
T TIGR01325 49 SRY-ANPTVAAFEERIAALE----G----AERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGI 119 (380)
T ss_pred ecC-CCchHHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCC
Confidence 344 3444678888888875 2 25688899999999999999999999999999988763 345677899
Q ss_pred EEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCC
Q 014172 202 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 281 (429)
Q Consensus 202 ~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~ 281 (429)
+++.++.+ |++.+++++++++++|++++|+||+|.+.+ +++|.++|+++ |+++|+|++|....+. .
T Consensus 120 ~v~~v~~~-------d~~~l~~~i~~~tklV~le~p~np~g~~~d---l~~I~~la~~~-gi~livD~a~~~~~~~--~- 185 (380)
T TIGR01325 120 EVSFVDPT-------DLNAWEAAVKPNTKLVFVETPSNPLGELVD---IAALAELAHAI-GALLVVDNVFATPVLQ--Q- 185 (380)
T ss_pred EEEEECCC-------CHHHHHHhcCCCceEEEEECCCCCCCeeeC---HHHHHHHHHHc-CCEEEEECCCcccccC--C-
Confidence 99998752 789999999889999999999999999999 89999999999 9999999999864321 1
Q ss_pred CccccCCCCCCceEEEeccChhccccccee-eEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHH
Q 014172 282 TSFASLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 360 (429)
Q Consensus 282 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~-G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~ 360 (429)
++ . .+..+++.|++|.++.+|.++ |++++++++++.+...........+.+.... ++.. .+.+...
T Consensus 186 -pl-~----~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~g~~~~p~~a~~---~l~~----l~tl~~r 252 (380)
T TIGR01325 186 -PL-K----LGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHTGPAMSPFNAWV---LLKG----LETLSLR 252 (380)
T ss_pred -ch-h----hCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHhhCCCCCHHHHHH---HHhc----cCcHHHH
Confidence 11 1 244588999999998788886 7888899988888876655554445554333 3332 3345566
Q ss_pred HHHHHHHHHHHHHHhccCCCcee
Q 014172 361 VKAFRERRDFLVKSFGELEGVKM 383 (429)
Q Consensus 361 ~~~~~~~r~~l~~~L~~l~g~~~ 383 (429)
.++..+++..+.+.|++.|+++.
T Consensus 253 ~~~~~~~a~~la~~L~~~p~v~~ 275 (380)
T TIGR01325 253 MQKQFDSALAIAEWLQAQPQVQA 275 (380)
T ss_pred HHHHHHHHHHHHHHHHcCCCccE
Confidence 77788888889999998877654
No 177
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.92 E-value=2.6e-23 Score=206.79 Aligned_cols=222 Identities=14% Similarity=0.193 Sum_probs=172.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCC----hHHHHHHcCC
Q 014172 126 TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS----YPEMARIADA 201 (429)
Q Consensus 126 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~----~~~~~~~~g~ 201 (429)
.+| +++...+|++.+|++.+ .++++++++++.++..++.+++++||+|+++...|.+ +...++..|+
T Consensus 65 ~r~-~~p~~~~le~~lA~l~g--------~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~ 135 (403)
T PRK07810 65 SRY-GNPTVSMFEERLRLIEG--------AEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGV 135 (403)
T ss_pred eCC-CCchHHHHHHHHHHHhC--------CCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCc
Confidence 444 44556788888888853 3478888888899999999999999999998865543 4456778899
Q ss_pred EEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCC
Q 014172 202 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 281 (429)
Q Consensus 202 ~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~ 281 (429)
+++.++. .|++++++++++++++|++++|+||||.+.+ +++|+++|+++ ++++|+|++|....+..
T Consensus 136 ~v~~vd~-------~d~~~l~~ai~~~tklV~~esp~Nptg~v~d---l~~I~~la~~~-g~~vivD~a~a~~~~~~--- 201 (403)
T PRK07810 136 ETVFVDG-------EDLSQWEEALSVPTQAVFFETPSNPMQSLVD---IAAVSELAHAA-GAKVVLDNVFATPLLQR--- 201 (403)
T ss_pred EEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCCCccccCC---
Confidence 9999974 2899999999999999999999999999999 99999999999 99999999998643321
Q ss_pred CccccCCCCCCceEEEeccChhccccccee-eEEEcCHHHHH-HHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHH
Q 014172 282 TSFASLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVA-ACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 359 (429)
Q Consensus 282 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~-G~v~~~~~~~~-~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~ 359 (429)
++ . .+..+++.|++|.++..|+++ ||++++++.+. .++......+.+++.+.+..+...|+. +..
T Consensus 202 -~~-~----~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~t-------l~~ 268 (403)
T PRK07810 202 -GL-P----LGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWVLLKGLET-------LAL 268 (403)
T ss_pred -hh-h----cCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHhccCc-------HHH
Confidence 11 1 245689999999998789987 88888877654 455554555566778777766665553 556
Q ss_pred HHHHHHHHHHHHHHHhccCCCcee
Q 014172 360 MVKAFRERRDFLVKSFGELEGVKM 383 (429)
Q Consensus 360 ~~~~~~~~r~~l~~~L~~l~g~~~ 383 (429)
+.++..++...+.+.|++.|++..
T Consensus 269 R~~~~~~~a~~~a~~L~~~p~v~~ 292 (403)
T PRK07810 269 RVRHSNASALRIAEFLEGHPAVRW 292 (403)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccE
Confidence 666677777778888888777654
No 178
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.92 E-value=1.1e-22 Score=197.44 Aligned_cols=300 Identities=20% Similarity=0.222 Sum_probs=225.0
Q ss_pred CCCeEEcCCCC-CCCCChHHHHHHHHHHHHcCCCCC-CC--CCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 94 GVSVIRLAAGE-PDFDTPVLIAEAGINAIREGFTRY-TP--NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 94 g~~~i~L~~g~-~~~~~p~~v~~a~~~~~~~~~~~Y-~~--~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
|++++||+.|+ ..+..++++++++.+++++.-..- ++ ..|..++.+.+.+.+.+++| .+..+++++|-...+.
T Consensus 38 ~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g---~e~al~f~SGy~AN~~ 114 (388)
T COG0156 38 GRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLG---AEAALLFSSGFVANLG 114 (388)
T ss_pred CceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhC---CCcEEEEcccchhHHH
Confidence 67899999998 788888999999999987621111 11 24555555555555555555 4456677777665554
Q ss_pred HHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------CCcEEEEcCCCCCccC
Q 014172 170 QAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGS 243 (429)
Q Consensus 170 ~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~~~~i~l~~p~NPtG~ 243 (429)
++.+++++||.|+...-.|.+..+.+++.+++++.+.. .|++.|++.+.+ +.++|++.+.-...|.
T Consensus 115 -~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGd 186 (388)
T COG0156 115 -LLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-------NDLDHLEALLEEARENGARRKLIVTEGVFSMDGD 186 (388)
T ss_pred -HHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecC-------CCHHHHHHHHHhhhccCCCceEEEEeccccCCCC
Confidence 89999999999999999999999999999999999985 288999998865 3567778888899999
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCC-CCceEEEeccChhcccccceeeEEEcCHHHHH
Q 014172 244 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM-WERTLTVNGFSKAFAMTGWRLGYIAGPKHFVA 322 (429)
Q Consensus 244 ~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~ 322 (429)
+.| +++|++++++| +.++++||+|+..++++.+......+... .+.+|+++||||+||..| ||+.++..+++
T Consensus 187 iAp---L~~l~~L~~ky-~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g~~~~~d 259 (388)
T COG0156 187 IAP---LPELVELAEKY-GALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAGSAALID 259 (388)
T ss_pred cCC---HHHHHHHHHHh-CcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceeeCcHHHHH
Confidence 999 99999999999 99999999999999886555444444222 456899999999999888 99999999999
Q ss_pred HHHHHhhcccCC--CchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCcc
Q 014172 323 ACNKIQSQFTSG--ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYY 400 (429)
Q Consensus 323 ~l~~~~~~~~~~--~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~ 400 (429)
.+....+.+.++ .++....++..+++. .+.....+++++++..++...++.. |+.+.+....+ +.+-+.+.
T Consensus 260 ~L~~~ar~~ifStalpP~~aaa~~~al~~----l~~~~~~r~~L~~~~~~~~~~~~~~-~~~~~~s~s~I-~pv~~gd~- 332 (388)
T COG0156 260 YLRNRARPFIFSTALPPAVAAAALAALRI----LEEGPERRERLQELAAFFRSLLKAL-GLVLLPSESPI-IPVILGDE- 332 (388)
T ss_pred HHHHhCCceeccCCCCHHHHHHHHHHHHH----HHhCHHHHHHHHHHHHHHHHHHHhc-CCccCCCCCCe-eeeEeCCH-
Confidence 998875555443 444444556667764 3334567777888888888666655 66664444444 55555432
Q ss_pred CCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 401 GSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
....++...|+++ ||.+.
T Consensus 333 ----------~~a~~~s~~l~~~-Gi~v~ 350 (388)
T COG0156 333 ----------ERALEASRALLEE-GIYVS 350 (388)
T ss_pred ----------HHHHHHHHHHHHC-CeeEe
Confidence 2478999999998 99863
No 179
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.92 E-value=6.1e-23 Score=202.57 Aligned_cols=267 Identities=12% Similarity=0.097 Sum_probs=190.9
Q ss_pred CHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCCh--HHHHHHcCCEEEEecCCCC
Q 014172 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSY--PEMARIADATPVILPTRIS 211 (429)
Q Consensus 134 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~v~~~~~ 211 (429)
..++.+.+.+.+.+..|.+-..++|++|+|+++++..++.+++.+||.+++..+.+.+. ...++..|++++.++++.
T Consensus 33 ~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~~- 111 (363)
T TIGR02326 33 YNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDTGE- 111 (363)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCC-
Confidence 34444445555555556422234799999999999999999998988877766655544 466788999999999853
Q ss_pred CCCCCCHHHHHhhccc--CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCC
Q 014172 212 ENFLLDPKVLESKLTE--KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 289 (429)
Q Consensus 212 ~~~~~d~e~l~~~l~~--~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~ 289 (429)
++.+|++.+++++++ +++++++++++||||..+| +++|.++|++| ++++|+|++++. |..+.++..
T Consensus 112 -~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~-g~~livD~~~~~----g~~~~~~~~--- 179 (363)
T TIGR02326 112 -VEPPDVVEVEAILAADPAITHIALVHCETTTGILNP---IEAVAKLAHRH-GKVTIVDAMSSF----GGIPIDIAE--- 179 (363)
T ss_pred -CCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCc---HHHHHHHHHHc-CCEEEEEccccc----cCcccchhh---
Confidence 455899999999874 4577888999999999999 89999999999 999999988763 222333333
Q ss_pred CCCceEEEeccChhc-ccccceeeEEEcCHHHHHHHHHHh------------------hcccCCCchHHHHHHHHHHhcC
Q 014172 290 MWERTLTVNGFSKAF-AMTGWRLGYIAGPKHFVAACNKIQ------------------SQFTSGASSISQKAGVAALGLG 350 (429)
Q Consensus 290 ~~~~~i~~~S~SK~~-~~~G~R~G~v~~~~~~~~~l~~~~------------------~~~~~~~~~~~q~aa~~~l~~~ 350 (429)
.+..+++.|++|.+ |.+| +||++++++.++.+.... ....++++.+.+.++.++++.-
T Consensus 180 -~~~D~~~~s~~K~l~~p~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l 256 (363)
T TIGR02326 180 -LHIDYLISSANKCIQGVPG--FGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLEL 256 (363)
T ss_pred -cCccEEEecCccccccCCc--ceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHH
Confidence 24458899999988 4445 799999998877653210 0122346777777777777541
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC---CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCee
Q 014172 351 YAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP---QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVL 427 (429)
Q Consensus 351 ~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~ 427 (429)
. .+..+++..++++++++++++.|+++ |+++..+ .++...|+.++.... .+..++.+.|.++ ||.
T Consensus 257 ~-~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~v~~~L~~~-gi~ 324 (363)
T TIGR02326 257 E-KEGGVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDEIQSPIITSFYSPEDPD---------YRFADFYQRLKEQ-GFV 324 (363)
T ss_pred H-HhhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCceEEEEECCCCCC---------CCHHHHHHHHHHC-CEE
Confidence 0 01236778899999999999999888 7776533 455667787764200 2567888887655 887
Q ss_pred c
Q 014172 428 L 428 (429)
Q Consensus 428 v 428 (429)
+
T Consensus 325 v 325 (363)
T TIGR02326 325 I 325 (363)
T ss_pred E
Confidence 6
No 180
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.92 E-value=3.3e-22 Score=197.66 Aligned_cols=296 Identities=22% Similarity=0.284 Sum_probs=220.6
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcC---CC--CCCCCC----CCHHHHHHHHHHHHhhcCCCCC-CCcEEEecC
Q 014172 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREG---FT--RYTPNA----GTLELRSAICHKLKEENGLSYT-PDQILVSNG 163 (429)
Q Consensus 94 g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~---~~--~Y~~~~----G~~~lr~~ia~~l~~~~g~~~~-~~~i~~t~G 163 (429)
+++.+.|....... .|..+++++.+.+... .+ .|.... -+.+.|+.++++++ .+ .++|++|.|
T Consensus 20 ~~~~vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~------a~~~~eIvft~~ 92 (405)
T COG0520 20 GKPLVYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLN------ADSSDEIVFTRG 92 (405)
T ss_pred CCCeEEecCccccc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhC------CCCCCeEEEeCC
Confidence 56788988877665 6899999999887532 11 121111 23456666666664 35 489999999
Q ss_pred hHHHHHHHHHHh---cCCCCEEEEcCCCCCC----hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcC
Q 014172 164 AKQSILQAVLAV---CSPGDEVIIPAPFWVS----YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS 236 (429)
Q Consensus 164 ~~~al~~~l~~l---~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~ 236 (429)
+|++|+++..++ ..+||+|++.+--|++ +...++..|++++.+|++ +++.++.+.+++.++++||+|.+++
T Consensus 93 tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~--~~g~~~~~~~~~~i~~~Tklvais~ 170 (405)
T COG0520 93 TTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD--DDGLLDLDALEKLITPKTKLVALSH 170 (405)
T ss_pred hhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecC--CCCCcCHHHHHHhcCCCceEEEEEC
Confidence 999999999998 6899999999988875 445666779999999997 3456899999999999999999999
Q ss_pred CCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccCh-hcccccceeeEEE
Q 014172 237 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSK-AFAMTGWRLGYIA 315 (429)
Q Consensus 237 p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK-~~~~~G~R~G~v~ 315 (429)
.+|.||.+.| +++|+++|+++ |+++++|.+++. ++.+..+.. .+..+++.|.+| .+|..| +|.++
T Consensus 171 vSn~tG~~~p---v~~I~~la~~~-ga~v~VDaaq~~----~h~~idv~~----l~~Df~afsgHKwl~gP~G--iGvLy 236 (405)
T COG0520 171 VSNVTGTVNP---VKEIAELAHEH-GALVLVDAAQAA----GHLPIDVQE----LGCDFLAFSGHKWLLGPTG--IGVLY 236 (405)
T ss_pred ccccccccch---HHHHHHHHHHc-CCEEEEECcccc----CccCCCchh----cCCCEEEEcccccccCCCc--eEEEE
Confidence 9999999999 99999999999 999999999876 444444444 356699999999 556335 89999
Q ss_pred cCHHHHHHHHHHh---------------------hcccCC-CchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHH
Q 014172 316 GPKHFVAACNKIQ---------------------SQFTSG-ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVK 373 (429)
Q Consensus 316 ~~~~~~~~l~~~~---------------------~~~~~~-~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~ 373 (429)
+.+++.+.+.... ..+..+ ++.....++.++++.- .+..++++.++-++..+++.+
T Consensus 237 ~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~--~~ig~~~i~~~e~~L~~~~~~ 314 (405)
T COG0520 237 VRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYL--LEIGMEAIEAHERELTEYLLE 314 (405)
T ss_pred EchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHH--HHHhHHHHHHHHHHHHHHHHH
Confidence 9999988762110 111222 3333334434455430 123356778888889999999
Q ss_pred HhccCCCceeecCC----ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 374 SFGELEGVKMSEPQ----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 374 ~L~~l~g~~~~~p~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.|+++|++++..|. ++. +.+.+++. ...+++..|-++ ||++
T Consensus 315 ~L~~~~~v~i~g~~~~~r~~~-vsF~v~~~------------~~~dv~~~L~~~-gI~v 359 (405)
T COG0520 315 GLSELPGVEIYGPPDADRGGI-VSFNVKGI------------HPHDVATLLDEK-GIAV 359 (405)
T ss_pred HHhcCCCeEEecCCcccCceE-EEEEeCCC------------CHHHHHHHHHhC-CeEE
Confidence 99999999998654 444 66777653 688999988776 6875
No 181
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.92 E-value=1.7e-23 Score=189.46 Aligned_cols=319 Identities=16% Similarity=0.172 Sum_probs=231.9
Q ss_pred cCCCeEEcCCCC--CCCCCh---HHHHHHHHHHHHc--CCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcE--EEecC
Q 014172 93 AGVSVIRLAAGE--PDFDTP---VLIAEAGINAIRE--GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQI--LVSNG 163 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~p---~~v~~a~~~~~~~--~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i--~~t~G 163 (429)
..+..++|+.|. .+-..| |.|.++-.....+ -.+.|-|-.|.+.++++.++.+-......+..+++ +.+-+
T Consensus 28 ~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~el~lg~~s~a~kE~Rv~~vQsls 107 (410)
T KOG1412|consen 28 LDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATELLLGADSPAIKEDRVFGVQSLS 107 (410)
T ss_pred CCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhhhHHHhcCCCchhhhhccccceeecc
Confidence 345678888886 222222 3343333332221 24679999999999999999874333333455665 46678
Q ss_pred hHHHHHHHHHHhc--CCCCEEEEcCCCCCChHHHHHHcCC-EEEEecCCCCCCCCCCHHHHHhhcccCC--cEEEEcC-C
Q 014172 164 AKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARIADA-TPVILPTRISENFLLDPKVLESKLTEKS--RLLILCS-P 237 (429)
Q Consensus 164 ~~~al~~~l~~l~--~~gd~Vlv~~p~y~~~~~~~~~~g~-~~~~v~~~~~~~~~~d~e~l~~~l~~~~--~~i~l~~-p 237 (429)
+|.++......+- -...+|.+..|+|.++..+++.+|. ++..++.-..++-.+|++.+...|+..+ ..++++. .
T Consensus 108 GTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLhaCA 187 (410)
T KOG1412|consen 108 GTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPEGSIIILHACA 187 (410)
T ss_pred ccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhCCCCcEEeeeccc
Confidence 8888886655442 1346799999999999999999994 5556665444566789999998887532 3344433 4
Q ss_pred CCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCC--CCCccccCCCCCCceEEEeccChhcccccceeeEEE
Q 014172 238 SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA--THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA 315 (429)
Q Consensus 238 ~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~ 315 (429)
|||||...++|+|.+|+++.+++ +++.+.|-+|.+|.-++- ..+.+..+.......+++.||+|.||+.+-|+|.+.
T Consensus 188 hNPTGmDPT~EQW~qia~vik~k-~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnlt 266 (410)
T KOG1412|consen 188 HNPTGMDPTREQWKQIADVIKSK-NLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLT 266 (410)
T ss_pred cCCCCCCCCHHHHHHHHHHHHhc-CceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhcccccccccceE
Confidence 99999999999999999999999 999999999999876642 223334444434568999999999999999999864
Q ss_pred c---CHHH----HHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHH---HHHHHHHHHHHHHHHHHHhccC--CC-ce
Q 014172 316 G---PKHF----VAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEV---VSKMVKAFRERRDFLVKSFGEL--EG-VK 382 (429)
Q Consensus 316 ~---~~~~----~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~---~~~~~~~~~~~r~~l~~~L~~l--~g-~~ 382 (429)
. ++.. ..++..+.+...++|+..+..++...|+.+...++| ++.+..++++.|..+++.|..+ || |.
T Consensus 267 vv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWD 346 (410)
T KOG1412|consen 267 VVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWD 346 (410)
T ss_pred EEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHH
Confidence 3 3333 344555566677889999999999999876555566 4456778899999999999887 56 66
Q ss_pred eecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 383 MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 383 ~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
....+.|||-+..+. ..-++.|.+++.|++
T Consensus 347 HI~~QiGMFSyTGLt----------------p~qV~~li~~h~vyL 376 (410)
T KOG1412|consen 347 HITQQIGMFSYTGLT----------------PAQVDHLIENHKVYL 376 (410)
T ss_pred HHHhhccceeecCCC----------------HHHHHHHHHhceEEE
Confidence 667899999876653 356778888888764
No 182
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.92 E-value=3.4e-23 Score=205.45 Aligned_cols=218 Identities=13% Similarity=0.163 Sum_probs=165.7
Q ss_pred CCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChH----HHHHHcCCEEEE
Q 014172 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVI 205 (429)
Q Consensus 130 ~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~ 205 (429)
+++...+|++.+|++++ .+..++++++++++..++.+++++||+|+++.|.|.... ..+...|++++.
T Consensus 57 ~~p~~~~le~~lA~l~g--------~~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~ 128 (391)
T TIGR01328 57 GNPTVSNLEGRIAFLEG--------TEAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDF 128 (391)
T ss_pred CCchHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEE
Confidence 34456789999998863 234678888889999999999999999999999887543 445668999999
Q ss_pred ecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccc
Q 014172 206 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (429)
Q Consensus 206 v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~ 285 (429)
++.+ |++.+++++++++++|++++|+||+|.+.+ +++|.++|+++ |+++|+|++|....+. .++
T Consensus 129 vd~~-------d~e~l~~~i~~~tklV~le~p~Np~G~v~d---l~~I~~la~~~-gi~livD~a~a~~~~~----~~~- 192 (391)
T TIGR01328 129 INMA-------IPEEVKAHIKDNTKIVYFETPANPTMKLID---MERVCRDAHSQ-GVKVIVDNTFATPMLT----NPV- 192 (391)
T ss_pred ECCC-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHc-CCEEEEECCCchhccC----Cch-
Confidence 8862 799999999999999999999999999999 88999999999 9999999999864321 111
Q ss_pred cCCCCCCceEEEeccChhcccccce-eeEEEcCHHHHHHHHHHhh--cccCCCchHHHHHHHHHHhcCCCChHHHHHHHH
Q 014172 286 SLPGMWERTLTVNGFSKAFAMTGWR-LGYIAGPKHFVAACNKIQS--QFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 362 (429)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~~~~G~R-~G~v~~~~~~~~~l~~~~~--~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~ 362 (429)
. .+..+++.|++|.++.+|.+ .|++++++++++.++.... ..+...+.+....+...|+ .+..+.+
T Consensus 193 ~----~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~-------tl~~r~~ 261 (391)
T TIGR01328 193 A----LGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILRGLK-------TLNIRMK 261 (391)
T ss_pred h----cCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcC-------cHHHHHH
Confidence 1 23448999999999988877 5778888998888875432 2233445544444443332 2445567
Q ss_pred HHHHHHHHHHHHhccCCCce
Q 014172 363 AFRERRDFLVKSFGELEGVK 382 (429)
Q Consensus 363 ~~~~~r~~l~~~L~~l~g~~ 382 (429)
+.+++...+.+.|++.|+++
T Consensus 262 ~~~~na~~la~~L~~~p~v~ 281 (391)
T TIGR01328 262 RHSENAMKVAEYLKSHPAVE 281 (391)
T ss_pred HHHHHHHHHHHHHHhCCCcc
Confidence 77788888888888877764
No 183
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.92 E-value=2.4e-22 Score=199.03 Aligned_cols=277 Identities=19% Similarity=0.235 Sum_probs=194.3
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCEEEEcCCCC
Q 014172 111 VLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFW 189 (429)
Q Consensus 111 ~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l-~~~gd~Vlv~~p~y 189 (429)
++-.+++.+.+.++...++ +...+|+++++++++ .++++.++|+++++.+++.++ +++||+|+++.|+|
T Consensus 14 ~~e~~~~~~~l~~~~~~~g--~~~~~le~~la~~~g--------~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~ 83 (379)
T PRK11658 14 DEELAAVKEVLRSGWITTG--PKNQALEQAFCQLTG--------NQHAIAVSSATAGMHITLMALGIGPGDEVITPSLTW 83 (379)
T ss_pred HHHHHHHHHHHHcCCccCC--HhHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcH
Confidence 5557788888877655443 357899999999874 246888999999999999999 89999999999999
Q ss_pred CChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEcc
Q 014172 190 VSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDE 269 (429)
Q Consensus 190 ~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~De 269 (429)
..+...+...|++++.+++++ +++.+|++.+++++++++|+|+ |+||+|...+ +++|.++|++| |++||+|+
T Consensus 84 ~~~~~~~~~~G~~~v~vd~~~-~~~~~d~~~l~~~i~~~tkav~---~~~~~G~~~d---~~~i~~~a~~~-gi~vi~D~ 155 (379)
T PRK11658 84 VSTLNMIVLLGATPVMVDVDR-DTLMVTPEAIEAAITPRTKAII---PVHYAGAPAD---LDAIRAIGERY-GIPVIEDA 155 (379)
T ss_pred HHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhcccCCeEEE---EeCCCCCcCC---HHHHHHHHHHc-CCeEEEEC
Confidence 999999999999999999875 4477899999999999999887 6778999988 88999999999 99999999
Q ss_pred CCccc-ccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcC-HHHHHHHHHHhhccc---------------
Q 014172 270 IYEHI-IYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQFT--------------- 332 (429)
Q Consensus 270 ay~~~-~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~-~~~~~~l~~~~~~~~--------------- 332 (429)
+|+.. .+.+.. +.. .+ +.+.||++...+++++.|+++++ +++.+.++.......
T Consensus 156 a~a~g~~~~~~~---~g~----~g--~~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~ 226 (379)
T PRK11658 156 AHAVGTYYKGRH---IGA----RG--TAIFSFHAIKNITCAEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQ 226 (379)
T ss_pred CCccCCeECCee---cCC----CC--CEEEeCCCCCcCcccCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCc
Confidence 99853 333321 111 12 24677876666678889998874 777777765432110
Q ss_pred -------CCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCC----ceEEEE-EecCCcc
Q 014172 333 -------SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ----GAFYLF-IDFSTYY 400 (429)
Q Consensus 333 -------~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~----~~~~~~-~~l~~~~ 400 (429)
.+.......|++.... .+.+++..++.++..+.+.+.|+++++..+..|. .+++++ +.++...
T Consensus 227 ~~~~~~G~n~~~~~l~AAl~~~q-----l~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (379)
T PRK11658 227 AEVLTPGYKYNLADINAAIALVQ-----LAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEER 301 (379)
T ss_pred ceeeccccccCcCHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCcc
Confidence 0000111223333332 2446677777777788888888887543333222 223332 4443210
Q ss_pred CCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 401 GSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
. ..+..++.++|.++ ||.+
T Consensus 302 ----~----~~~r~~~~~~L~~~-gI~~ 320 (379)
T PRK11658 302 ----C----GISRDALMEALKER-GIGT 320 (379)
T ss_pred ----c----cCCHHHHHHHHHHC-CCCC
Confidence 0 02578899988665 8753
No 184
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.92 E-value=1e-22 Score=201.40 Aligned_cols=288 Identities=16% Similarity=0.142 Sum_probs=196.1
Q ss_pred CCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcC
Q 014172 107 FDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPA 186 (429)
Q Consensus 107 ~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~ 186 (429)
.++++.+.+++.... ..+.+ ...+..+.+.+.+.+..|.+-+.+.|++++|+++++..++.++..+||.|++..
T Consensus 14 ~~~~~~~~~a~~~~~----~~~~~--~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~ 87 (368)
T PRK13479 14 LTTSRTVREAMLRDW----GSWDD--DFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPD 87 (368)
T ss_pred CCCCHHHHHHhCCCC----CCCCh--HHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEe
Confidence 344566666655432 12211 122344444444444455322235688999999999999999999999999998
Q ss_pred CCCCCh--HHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc--CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCC
Q 014172 187 PFWVSY--PEMARIADATPVILPTRISENFLLDPKVLESKLTE--KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR 262 (429)
Q Consensus 187 p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~ 262 (429)
++|.+. ...++..|++++.++.+. ++.+|++++++++++ +++++++++|+||||...| +++|.++|+++ +
T Consensus 88 ~~~~~~~~~~~~~~~g~~~~~i~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~-~ 161 (368)
T PRK13479 88 NGAYGARIAQIAEYLGIAHVVLDTGE--DEPPDAAEVEAALAADPRITHVALVHCETTTGILNP---LDEIAAVAKRH-G 161 (368)
T ss_pred CCchHHHHHHHHHHcCCcEEEEECCC--CCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC---HHHHHHHHHHc-C
Confidence 887766 377888999999999863 345899999998864 4678889999999999999 88999999999 9
Q ss_pred eEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhc-ccccceeeEEEcCHHHHHHHHHHhh------------
Q 014172 263 LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF-AMTGWRLGYIAGPKHFVAACNKIQS------------ 329 (429)
Q Consensus 263 i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~R~G~v~~~~~~~~~l~~~~~------------ 329 (429)
+++|+|+++.. +..+.++.. ++..+++.|++|.+ |++| +||+++++++++.+.....
T Consensus 162 ~~livDa~~~~----g~~~~~~~~----~~~d~~v~s~~K~l~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (368)
T PRK13479 162 KRLIVDAMSSF----GAIPIDIAE----LGIDALISSANKCIEGVPG--FGFVIARRSELEACKGNSRSLSLDLYDQWAY 231 (368)
T ss_pred CEEEEEccccc----CCccccccc----cCceEEEecCccccccCCC--ceEEEECHHHHHHhhcCCCCeeecHHHHHhh
Confidence 99999966543 222223222 23447788999976 6666 6999999998877654321
Q ss_pred -----cccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCC---ceEEEEEecCCccC
Q 014172 330 -----QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ---GAFYLFIDFSTYYG 401 (429)
Q Consensus 330 -----~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~---~~~~~~~~l~~~~~ 401 (429)
...++++.+.+.++.++++.-. .+.++++..++++++++.+.+.|+++ |+++..+. .+..+.+.++..
T Consensus 232 ~~~~~~~~~t~~~~~~~~l~~al~~l~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-- 307 (368)
T PRK13479 232 MEKTGQWRFTPPTHVVAAFYQALLELE-EEGGVPARGARYANNQRTLVAGMRAL-GFEPLLDAEIQSPIIVTFHAPAD-- 307 (368)
T ss_pred hcccCCCCCCCcHHHHHHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHc-CCcccCCchhcCceEEEEECCCC--
Confidence 1112456666666666665310 12246777889999999999999998 87765332 222233333321
Q ss_pred CcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 402 SEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
...+..++.++|.++ ||.|
T Consensus 308 -------~~~~~~~l~~~L~~~-gi~v 326 (368)
T PRK13479 308 -------PAYDFKEFYERLKEQ-GFVI 326 (368)
T ss_pred -------CCcCHHHHHHHHHHC-CEEE
Confidence 002567899998776 8876
No 185
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.91 E-value=6.4e-23 Score=204.24 Aligned_cols=219 Identities=15% Similarity=0.173 Sum_probs=166.9
Q ss_pred CCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChH----HHHHHcCCEEEE
Q 014172 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVI 205 (429)
Q Consensus 130 ~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~ 205 (429)
+.+...+|++.++++++ .+..+++++++.++.+++.+++++||+|+++.|.|.... ..++..|++++.
T Consensus 63 ~~p~~~~le~~lA~l~g--------~~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~ 134 (403)
T PRK07503 63 SNPTLALLEQRMASLEG--------GEAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRH 134 (403)
T ss_pred CCchHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEE
Confidence 34456788888888763 234567777888999999999999999999999987633 345678999999
Q ss_pred ecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccc
Q 014172 206 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (429)
Q Consensus 206 v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~ 285 (429)
++.. |++.+++++++++|+|++++|+||||.+.+ +++|.++|++| |+++|+|++|...... .++
T Consensus 135 vd~~-------d~~~l~~~i~~~tklV~le~p~NPtG~~~d---i~~I~~la~~~-gi~lIvD~a~a~~~~~----~~l- 198 (403)
T PRK07503 135 VDLT-------DPAALKAAISDKTRMVYFETPANPNMRLVD---IAAVAEIAHGA-GAKVVVDNTYCTPYLQ----RPL- 198 (403)
T ss_pred eCCC-------CHHHHHHhcCccCcEEEEeCCCCCCCeeeC---HHHHHHHHHHc-CCEEEEECCCcccccC----Cch-
Confidence 8862 799999999999999999999999999999 89999999999 9999999999864321 111
Q ss_pred cCCCCCCceEEEeccChhccccc-ceeeEEEcCHHHHHHHHHH--hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHH
Q 014172 286 SLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI--QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 362 (429)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~~~~G-~R~G~v~~~~~~~~~l~~~--~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~ 362 (429)
. .+..+++.|++|.++.+| .|.||++.++++++.++.. ....+.+.+.+.+..+...|+ .+..+.+
T Consensus 199 ~----~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~-------tl~~r~~ 267 (403)
T PRK07503 199 E----LGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMRGLK-------TLALRMD 267 (403)
T ss_pred h----hCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcc-------hHHHHHH
Confidence 1 234599999999998665 7889999989888887633 444455566666554444333 3555556
Q ss_pred HHHHHHHHHHHHhccCCCcee
Q 014172 363 AFRERRDFLVKSFGELEGVKM 383 (429)
Q Consensus 363 ~~~~~r~~l~~~L~~l~g~~~ 383 (429)
+..++...+.+.|++.|.+++
T Consensus 268 ~~~~na~~~a~~L~~~p~v~~ 288 (403)
T PRK07503 268 RHCASAQAVAEWLARHPAVEL 288 (403)
T ss_pred HHHHHHHHHHHHHHhCCCccE
Confidence 666788888888888776553
No 186
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.91 E-value=5.5e-23 Score=193.01 Aligned_cols=281 Identities=17% Similarity=0.237 Sum_probs=187.0
Q ss_pred CCCC-CCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHH--HHHh----cC---C-----CCEEEEcCCCC
Q 014172 125 FTRY-TPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA--VLAV----CS---P-----GDEVIIPAPFW 189 (429)
Q Consensus 125 ~~~Y-~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~--l~~l----~~---~-----gd~Vlv~~p~y 189 (429)
.-+| +...|.+++|+..++.+. +++++|++..+++-.|..- .+++ .+ | .=+.|+|.|.|
T Consensus 61 ~RNY~G~l~Gipe~r~l~a~llg------v~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGY 134 (425)
T PF12897_consen 61 CRNYPGGLDGIPEARELFAELLG------VPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGY 134 (425)
T ss_dssp TTSS-S-SS--HHHHHHHHHHHT------S-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--
T ss_pred ccCCCCccCChHHHHHHHHHHhC------CCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCc
Confidence 3579 888999999999999985 6889999988776555322 1221 21 1 12689999999
Q ss_pred CChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc--cCCcEEE-EcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE
Q 014172 190 VSYPEMARIADATPVILPTRISENFLLDPKVLESKLT--EKSRLLI-LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (429)
Q Consensus 190 ~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~--~~~~~i~-l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi 266 (429)
.-+..+++.+|.+.+.||+.+++ +|.|.+++.+. +..|.|| ++.-+||||.+|+.|.+++++.+-..-||+.|+
T Consensus 135 DRHFai~E~~Giemi~VpM~~dG---PDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~ 211 (425)
T PF12897_consen 135 DRHFAITEHFGIEMIPVPMTEDG---PDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIF 211 (425)
T ss_dssp HHHHHHHHHCT-EEEEEEEETTE---E-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEE
T ss_pred hHHHHHHHhhCcEEEecCCCCCC---CCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEE
Confidence 99999999999999999997654 89999999984 4678887 577799999999999999999983333599999
Q ss_pred EccCCccccc-CCCCCC---cccc---CCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHH
Q 014172 267 SDEIYEHIIY-APATHT---SFAS---LPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSIS 339 (429)
Q Consensus 267 ~Deay~~~~~-~~~~~~---~~~~---~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~ 339 (429)
.|++|..-.+ +..... .+.. -.+..++++.+.|.||.- .+|.+++++.++++-++.+.+.....+.++.-+.
T Consensus 212 WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKIT-f~GaGva~~aaS~~Nl~~~~~~~~~~tIgpdKvN 290 (425)
T PF12897_consen 212 WDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKIT-FPGAGVAFFAASEANLAWIKKHLSVQTIGPDKVN 290 (425)
T ss_dssp EE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS-EEEEE-HHHHHHHHHHHHHH-S---HHH
T ss_pred eecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccc-cCCcceeeeecCHHHHHHHHHHhcCceeCccHHH
Confidence 9999994333 222111 2222 245579999999999987 5999999999999999999988888888999999
Q ss_pred HHHHHHHHhcCC-CChHHHHHHHHHHHHHHHHHHHHhcc-CC---C-ceeecCCceEEEEEecCCccCCcccCCCCCCCh
Q 014172 340 QKAGVAALGLGY-AGGEVVSKMVKAFRERRDFLVKSFGE-LE---G-VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 413 (429)
Q Consensus 340 q~aa~~~l~~~~-~~~~~~~~~~~~~~~~r~~l~~~L~~-l~---g-~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~ 413 (429)
|..-..++.+.. ..+.++++.++.++-+.+.+.+.|++ +. | .+|..|.||||+++++.+. .+
T Consensus 291 QLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G------------~A 358 (425)
T PF12897_consen 291 QLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDG------------TA 358 (425)
T ss_dssp HHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT-------------H
T ss_pred HHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCC------------hH
Confidence 999999998722 12456677777777777777777765 43 3 5899999999999999863 45
Q ss_pred HHHHHHHHHhCCeec
Q 014172 414 ESLCRYLLDKAQVLL 428 (429)
Q Consensus 414 ~~~~~~Ll~~~gV~v 428 (429)
.++.+ |.++.||.+
T Consensus 359 krvV~-lakeAGV~L 372 (425)
T PF12897_consen 359 KRVVE-LAKEAGVAL 372 (425)
T ss_dssp HHHHH-HHHHTTEE-
T ss_pred HHHHH-HHHHhCcee
Confidence 66665 456679975
No 187
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.91 E-value=1.1e-22 Score=200.95 Aligned_cols=218 Identities=15% Similarity=0.188 Sum_probs=172.0
Q ss_pred CCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH----HHHHcCCEEEE
Q 014172 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVI 205 (429)
Q Consensus 130 ~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~ 205 (429)
.++...+|++.++++++ .+.+++++++++++..++.+++++||+|+++.+.|.+... .++..|++++.
T Consensus 38 ~~p~~~~le~~la~l~g--------~~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~ 109 (369)
T cd00614 38 GNPTVDALEKKLAALEG--------GEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTF 109 (369)
T ss_pred CChhHHHHHHHHHHHHC--------CCCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEE
Confidence 44556778888887753 2467888888999999999999999999999999988654 34577999988
Q ss_pred ecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccc
Q 014172 206 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (429)
Q Consensus 206 v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~ 285 (429)
++.+ |++.+++++++++++|++.+|+||+|.+.+ +++|+++|++| |+++|+|++|....+. .++
T Consensus 110 v~~~-------d~~~l~~~i~~~~~~v~~e~~~np~g~~~d---l~~i~~la~~~-g~~livD~t~~~~~~~----~~~- 173 (369)
T cd00614 110 VDPD-------DPEALEAAIKPETKLVYVESPTNPTLKVVD---IEAIAELAHEH-GALLVVDNTFATPYLQ----RPL- 173 (369)
T ss_pred eCCC-------CHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCCcchhcC----Chh-
Confidence 8752 689999999889999999999999999999 88999999999 9999999999864331 111
Q ss_pred cCCCCCCceEEEeccChhccccc-ceeeEEEcCH-HHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHH
Q 014172 286 SLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPK-HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (429)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~~~~G-~R~G~v~~~~-~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~ 363 (429)
..+.++++.|++|.++.+| .+.||+++++ ++++.+.......+.+.+.+.+.++...|+ .+....++
T Consensus 174 ----~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~-------tl~~r~~~ 242 (369)
T cd00614 174 ----ELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLK-------TLPLRMER 242 (369)
T ss_pred ----hhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCC-------CHHHHHHH
Confidence 1345699999999997665 7899999977 888888877666666667666555544443 24456677
Q ss_pred HHHHHHHHHHHhccCCCce
Q 014172 364 FRERRDFLVKSFGELEGVK 382 (429)
Q Consensus 364 ~~~~r~~l~~~L~~l~g~~ 382 (429)
..++...+.+.|++.|++.
T Consensus 243 ~~~na~~la~~L~~~~~v~ 261 (369)
T cd00614 243 HSENALKVAEFLEKHPKVE 261 (369)
T ss_pred HHHHHHHHHHHHHcCCCcc
Confidence 7888889999999887664
No 188
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.91 E-value=1.6e-22 Score=198.94 Aligned_cols=281 Identities=19% Similarity=0.160 Sum_probs=194.5
Q ss_pred CChHHHHHHHHHHHHcCCCCCCC---CCC------CHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcC-
Q 014172 108 DTPVLIAEAGINAIREGFTRYTP---NAG------TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS- 177 (429)
Q Consensus 108 ~~p~~v~~a~~~~~~~~~~~Y~~---~~G------~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~- 177 (429)
++|+.+.+++.+.+......... ..+ ..++|+.++++ .| .++++|++|+|+++++..++.++..
T Consensus 9 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~----~g--~~~~~v~~~~g~t~a~~~~l~~l~~~ 82 (353)
T TIGR03235 9 PIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEA----LG--ADTEEVIFTSGATESNNLAILGLARA 82 (353)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHH----hC--CCCCeEEEeCCHHHHHHHHHHHHHHh
Confidence 45788999998887542211111 111 23455555554 45 4678999999999999999888763
Q ss_pred ---CC-CEEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHH
Q 014172 178 ---PG-DEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLL 250 (429)
Q Consensus 178 ---~g-d~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l 250 (429)
+| +.|++....|+++.. .++..|++++.++++. ++.+|++++++.+++++++|++++++||||.+++ +
T Consensus 83 ~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~---~ 157 (353)
T TIGR03235 83 GEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDE--SGRIDVDELADAIRPDTLLVSIMHVNNETGSIQP---I 157 (353)
T ss_pred cccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhCCCCCEEEEEEcccCCceeccC---H
Confidence 56 788888877776544 3455799999999863 4568999999999888999999999999999999 8
Q ss_pred HHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHH--HHHH-
Q 014172 251 DEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA--CNKI- 327 (429)
Q Consensus 251 ~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~--l~~~- 327 (429)
++|.++|+++ |+++|+|++++... ....+. .++..+++.|++|.+|.+| +|+++++++.... +...
T Consensus 158 ~~I~~l~~~~-~~~~ivD~a~~~g~----~~~~~~----~~~~D~~~~s~~K~~gp~g--~g~l~~~~~~~~~~~~~~~~ 226 (353)
T TIGR03235 158 REIAEVLEAH-EAFFHVDAAQVVGK----ITVDLS----ADRIDLISCSGHKIYGPKG--IGALVIRKRGKPKAPLKPIM 226 (353)
T ss_pred HHHHHHHHHc-CCEEEEEchhhcCC----cccccc----ccCCCEEEeehhhcCCCCc--eEEEEEccCcccccccCcee
Confidence 9999999999 99999999987522 111221 1345688889999887556 8999888764322 1110
Q ss_pred ------hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCC-ce--EEEEEecCC
Q 014172 328 ------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ-GA--FYLFIDFST 398 (429)
Q Consensus 328 ------~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~-~~--~~~~~~l~~ 398 (429)
.......++.....++.++++. ..+.+++..++++++++++++.|++ +|+++..+. .. -.+.+.+++
T Consensus 227 ~~~~~~~~~~~gt~~~~~~~al~~al~~---~~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~i~~~~~~~ 302 (353)
T TIGR03235 227 FGGGQERGLRPGTLPVHLIVGMGEAAEI---ARRNAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPHILNFSIDG 302 (353)
T ss_pred eCCCCcCccccCCCChHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCCEEEEEeCC
Confidence 0011223445555566666664 2456778889999999999999988 598876432 21 124444453
Q ss_pred ccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 399 YYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
. +..++...| ++ +|.|
T Consensus 303 ~------------~~~~v~~~L-~~-~i~v 318 (353)
T TIGR03235 303 V------------NSEALIVNL-RA-DAAV 318 (353)
T ss_pred c------------CHHHHHHHH-hC-CeEE
Confidence 2 567777777 44 6665
No 189
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=1.7e-22 Score=200.40 Aligned_cols=218 Identities=12% Similarity=0.108 Sum_probs=162.5
Q ss_pred CCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHH----HcCCEEEE
Q 014172 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR----IADATPVI 205 (429)
Q Consensus 130 ~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~ 205 (429)
+.+...+|++++|++.+ .+..++++++++++.+++.+++++||+|+++.|+|......+. ..|++++.
T Consensus 59 ~~p~~~~Le~~lA~~~g--------~~~~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~ 130 (388)
T PRK07811 59 GNPTRTALEEQLAALEG--------GAYGRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTP 130 (388)
T ss_pred CCccHHHHHHHHHHHhC--------CCceEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEE
Confidence 55678899999999874 1233555666899999999999999999999999986543332 35888877
Q ss_pred ecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccc
Q 014172 206 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (429)
Q Consensus 206 v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~ 285 (429)
++. .|++++++++++++|+|++++|+||||.+.+ +++|.++|+++ |++||+|++|....+. .++
T Consensus 131 ~d~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~~~d---l~~I~~la~~~-gi~lIvD~a~a~~~~~----~p~- 194 (388)
T PRK07811 131 VDL-------SDLDAVRAAITPRTKLIWVETPTNPLLSITD---IAALAELAHDA-GAKVVVDNTFASPYLQ----QPL- 194 (388)
T ss_pred eCC-------CCHHHHHHhcCcCCeEEEEECCCCCcceecC---HHHHHHHHHHc-CCEEEEECCCCccccC----Cch-
Confidence 764 3899999999999999999999999999988 99999999999 9999999999864321 111
Q ss_pred cCCCCCCceEEEeccChhccccc-ceeeEEEcC-HHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHH
Q 014172 286 SLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (429)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~~~~G-~R~G~v~~~-~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~ 363 (429)
. .+..+++.|++|.++.+| .+.||++++ +++.+.+...........+......+...|+ .+..+.++
T Consensus 195 ~----~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~-------tl~~R~~~ 263 (388)
T PRK07811 195 A----LGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLK-------TLAVRMDR 263 (388)
T ss_pred h----hCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccC-------cHHHHHHH
Confidence 1 234499999999998544 568998875 6676766655554444455554333333333 25556666
Q ss_pred HHHHHHHHHHHhccCCCce
Q 014172 364 FRERRDFLVKSFGELEGVK 382 (429)
Q Consensus 364 ~~~~r~~l~~~L~~l~g~~ 382 (429)
..++...+.+.|++.|+++
T Consensus 264 ~~~na~~la~~L~~~p~v~ 282 (388)
T PRK07811 264 HSENAEAVAEFLAGHPEVS 282 (388)
T ss_pred HHHHHHHHHHHHHhCCCee
Confidence 6778888888888887764
No 190
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=1.8e-22 Score=199.21 Aligned_cols=221 Identities=15% Similarity=0.165 Sum_probs=171.1
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH----HHHcCC
Q 014172 126 TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADA 201 (429)
Q Consensus 126 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~ 201 (429)
.+| +++....|++++|++. ..+++++++|+++++.+++.+++++||.|+++.|+|.+.... ....|+
T Consensus 48 ~R~-~npt~~~Le~~lA~le--------g~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi 118 (388)
T PRK08861 48 TRS-GNPNRGLLEQTLSELE--------SGKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDF 118 (388)
T ss_pred cCC-CCchHHHHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCe
Confidence 445 4556788999999886 347999999999999999999999999999999999864332 234577
Q ss_pred EEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCC
Q 014172 202 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 281 (429)
Q Consensus 202 ~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~ 281 (429)
+++.++. .|++.+++++++++++|++++|+||||.+++ +++|.++|+++ ++++|+|++|....+.
T Consensus 119 ~v~~vd~-------~d~e~l~~~i~~~tklV~lesP~NPtG~v~d---l~~I~~la~~~-gi~vIvDea~~~~~~~---- 183 (388)
T PRK08861 119 KVQFVDQ-------SDAAALDAALAKKPKLILLETPSNPLVRVVD---IAELCQKAKAV-GALVAVDNTFLTPVLQ---- 183 (388)
T ss_pred EEEEECC-------CCHHHHHHhcCcCCeEEEEECCCCCCCcccC---HHHHHHHHHHc-CCEEEEECCccccccC----
Confidence 8888762 4899999999989999999999999999999 88899999999 9999999999864322
Q ss_pred CccccCCCCCCceEEEeccChhccc-ccceeeEEEcC-HHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHH
Q 014172 282 TSFASLPGMWERTLTVNGFSKAFAM-TGWRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 359 (429)
Q Consensus 282 ~~~~~~~~~~~~~i~~~S~SK~~~~-~G~R~G~v~~~-~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~ 359 (429)
.++ . .+..+++.|++|.++- .+...|++++. +++.+.++......+.+.+++....+...|+. +.-
T Consensus 184 ~pl-~----~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~T-------l~l 251 (388)
T PRK08861 184 KPL-E----LGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRGIRT-------LGA 251 (388)
T ss_pred CCc-c----cCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhcCCC-------HHH
Confidence 111 1 2345999999999863 34678998874 56777777776666667777775544444433 555
Q ss_pred HHHHHHHHHHHHHHHhccCCCce
Q 014172 360 MVKAFRERRDFLVKSFGELEGVK 382 (429)
Q Consensus 360 ~~~~~~~~r~~l~~~L~~l~g~~ 382 (429)
+.++..++...+.+.|++.|.++
T Consensus 252 R~~~~~~~a~~~a~~L~~~p~v~ 274 (388)
T PRK08861 252 RMRVHEESAQQILAYLQTQSLVG 274 (388)
T ss_pred HHHHHHHHHHHHHHHHHhCCCee
Confidence 66777778888888888877654
No 191
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.91 E-value=2.4e-22 Score=199.51 Aligned_cols=284 Identities=15% Similarity=0.108 Sum_probs=196.1
Q ss_pred CChHHHHHHHHHHHHcCCCCCCCCCC-----CHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhc---CCC
Q 014172 108 DTPVLIAEAGINAIREGFTRYTPNAG-----TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC---SPG 179 (429)
Q Consensus 108 ~~p~~v~~a~~~~~~~~~~~Y~~~~G-----~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~---~~g 179 (429)
++|+.+++++.+.+... ..+..... ..+..+.+.+.+.+.+| .++++|++|+|+++++..++..++ .+|
T Consensus 10 ~~~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~la~~~g--~~~~~i~~t~~~t~a~~~al~~~~~~~~~~ 86 (379)
T TIGR03402 10 RVDPEVLEAMLPYFTEY-FGNPSSMHSFGGEVGKAVEEAREQVAKLLG--AEPDEIIFTSGGTESDNTAIKSALAAQPEK 86 (379)
T ss_pred CCCHHHHHHHHHHHHhc-CCCCCcccHHHHHHHHHHHHHHHHHHHHhC--CCCCeEEEeCcHHHHHHHHHHHHHHhcCCC
Confidence 35678999998877642 22322111 12233333344555556 457899999999999999888764 456
Q ss_pred CEEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHH
Q 014172 180 DEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARI 256 (429)
Q Consensus 180 d~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~ 256 (429)
|.|++....|+++.. .++..|++++.++.+. ++.+|++++++.++++++++++++++||||.++| +++|.++
T Consensus 87 ~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~---~~~I~~l 161 (379)
T TIGR03402 87 RHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDE--EGRLDLEELRAAITDDTALVSVMWANNETGTIFP---IEEIGEI 161 (379)
T ss_pred CeEEEcccccHHHHHHHHHHHHcCCEEEEEccCC--CCcCCHHHHHHhcCCCcEEEEEEcccCCeeeccc---HHHHHHH
Confidence 899999988877654 3445699999999853 3568999999999999999999999999999999 7889999
Q ss_pred HHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHH--HHHH--H-Hhhcc
Q 014172 257 VAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFV--AACN--K-IQSQF 331 (429)
Q Consensus 257 a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~--~~l~--~-~~~~~ 331 (429)
|++| |+++++|++++. |..+..+.. .+..+++.|.+|.+|.+| +|+++..++.. ..+. . .....
T Consensus 162 ~~~~-g~~vivD~~~~~----g~~~~~~~~----~~~D~~~~s~~K~~gp~G--~g~l~v~~~~~~~p~~~g~~~~~~~~ 230 (379)
T TIGR03402 162 AKER-GALFHTDAVQAV----GKIPIDLKE----MNIDMLSLSGHKLHGPKG--VGALYIRKGTRFRPLLRGGHQERGRR 230 (379)
T ss_pred HHHc-CCEEEEECcccc----cccccCccc----CCCCEEEEcHHHcCCCCc--eEEEEECCCCCCCCcccCCccCCCcC
Confidence 9999 999999999975 322223322 244578888889777556 78887665431 0000 0 00011
Q ss_pred cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc-CCCceeecCC-----ceEEEEEecCCccCCccc
Q 014172 332 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQ-----GAFYLFIDFSTYYGSEAE 405 (429)
Q Consensus 332 ~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-l~g~~~~~p~-----~~~~~~~~l~~~~~~~~~ 405 (429)
..+++.....++.++++. ..++++...++++++++.+.+.|.+ ++++++..+. +.+.+|+ +.
T Consensus 231 ~gt~~~~~~~~l~~al~~---~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~------- 298 (379)
T TIGR03402 231 AGTENVPGIVGLGKAAEL---ATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISF--EY------- 298 (379)
T ss_pred CCCccHHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEe--cC-------
Confidence 234555666666677765 3567888888999999999999986 8888876542 1233343 32
Q ss_pred CCCCCCChHHHHHHHHHhCCeec
Q 014172 406 GFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 406 ~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+..++...| ++.||.|
T Consensus 299 -----~~~~~~~~~l-~~~gI~v 315 (379)
T TIGR03402 299 -----IEGEAILLLL-DMEGICA 315 (379)
T ss_pred -----CCHHHHHHhh-ccCCEEE
Confidence 1567888876 5558876
No 192
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.91 E-value=7.5e-22 Score=195.50 Aligned_cols=287 Identities=16% Similarity=0.195 Sum_probs=196.6
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhc------CCCCEEEE
Q 014172 111 VLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC------SPGDEVII 184 (429)
Q Consensus 111 ~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~------~~gd~Vlv 184 (429)
+.+.+++...+......-....|..++.+.+.+.+++.+| .++.++++++|+++++..++.+++ ++||+|++
T Consensus 34 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~ 111 (373)
T TIGR03812 34 PIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLH--LPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIV 111 (373)
T ss_pred HHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhC--CCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEE
Confidence 4456666655443211111113455666666666766667 356788999999999988877664 46799999
Q ss_pred cCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeE
Q 014172 185 PAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLL 264 (429)
Q Consensus 185 ~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~ 264 (429)
++++|.++...++..|++++.++.+ .++.+|++++++.+++++..+++.+|+||||.+.+ +++|.++|+++ +++
T Consensus 112 ~~~~h~~~~~~~~~~G~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~---~~~i~~l~~~~-~~~ 185 (373)
T TIGR03812 112 PESAHFSFEKAAEMLGLELRYAPLD--EDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDD---IEELSKIALEN-GIY 185 (373)
T ss_pred CCcchHHHHHHHHHcCCeEEEEeeC--CCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccCC---HHHHHHHHHHc-CCe
Confidence 9999999999999999999999986 34678999999999887765555558999999998 88999999999 999
Q ss_pred EEEccCCcccccC--C--CCCCccccCCCCCCceEEEeccChhcccccceeeEEE-cCHHHHHHHHHHhhccc-------
Q 014172 265 VLSDEIYEHIIYA--P--ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA-GPKHFVAACNKIQSQFT------- 332 (429)
Q Consensus 265 vi~Deay~~~~~~--~--~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~-~~~~~~~~l~~~~~~~~------- 332 (429)
+|+|++|..+... . .....+ .+. ..+-..+..|.+| +++++.|.|+++ .++++++.+... ..+.
T Consensus 186 livD~a~~~~~~~~~~~~~~~~~~-d~~-~~~~d~~~~s~~K-~~~~~~~~G~~~~~~~~~~~~l~~~-~~~~~~~~~~~ 261 (373)
T TIGR03812 186 LHVDAAFGGFVIPFLKKGYNPPPF-DFS-LPGVQSITIDPHK-MGLSPIPAGGILFRSKSYLKYLSVD-APYLTVKKQAT 261 (373)
T ss_pred EEEEcCchhHHHHHHhcCCCCCCc-ccc-CCCCCEEEECccc-cCCCcCCceEEEEeCHHHHhhhccc-CcccCCCCCcc
Confidence 9999999865321 0 000000 010 0122245567789 656778888665 577777766421 1111
Q ss_pred --CCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCce-eecCCceEEEEEecCCccCCcccCCCC
Q 014172 333 --SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFSTYYGSEAEGFGK 409 (429)
Q Consensus 333 --~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~-~~~p~~~~~~~~~l~~~~~~~~~~~~~ 409 (429)
...+.....++..+++. ..++.+++..++..++++++.+.|+++ |+. +..|..+ ++.+.++
T Consensus 262 ~~gt~~~~~~~~~~~~l~~--l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-~v~~~~~------------ 325 (373)
T TIGR03812 262 ITGTRSGASAAATYAVIKY--LGREGYRKIVAECMENTRYLVEELKKI-GFEPVIEPVLN-IVAFEVD------------ 325 (373)
T ss_pred eEeechhHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEcCCCce-EEEEEeC------------
Confidence 12234455555566653 125667888899999999999999998 554 4445554 4667665
Q ss_pred CCChHHHHHHHHHhCCeec
Q 014172 410 IENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 410 ~~~~~~~~~~Ll~~~gV~v 428 (429)
+..++.++|.++ ||.|
T Consensus 326 --~~~~v~~~L~~~-gi~v 341 (373)
T TIGR03812 326 --DPEEVRKKLRDR-GWYV 341 (373)
T ss_pred --CHHHHHHHHHHC-Ccee
Confidence 345788888776 8876
No 193
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.91 E-value=1.3e-22 Score=202.95 Aligned_cols=300 Identities=14% Similarity=0.133 Sum_probs=203.5
Q ss_pred cCCCeEEcCCCCCCCCC---hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGEPDFDT---PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~~~~~~---p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..||+..|...... +|.+.+++.+.+.+..... ..-..+....+++.+.+..| .+.+++++++++++.
T Consensus 39 ~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~----~~~~~~~~SGs~A~e 112 (401)
T PRK00854 39 DGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTS--RAFRNDQLAPLYEELAALTG----SHKVLPMNSGAEAVE 112 (401)
T ss_pred CCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccc--cccCCHHHHHHHHHHHhhCC----CCEEEEeCCcHHHHH
Confidence 57788998887654444 7889999999887532111 10112334444444444333 358999999999999
Q ss_pred HHHHHhcC---------CC-CEEEEcCCCCCChHHHHHHcCC-------------EEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 170 QAVLAVCS---------PG-DEVIIPAPFWVSYPEMARIADA-------------TPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 170 ~~l~~l~~---------~g-d~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
.+++++.. +| ++|++..-+|.+....+...+. .+..++. .|++.+++.+.
T Consensus 113 ~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~i~ 185 (401)
T PRK00854 113 TAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF-------GDAEALEAAIT 185 (401)
T ss_pred HHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC-------CCHHHHHHHhC
Confidence 99988842 24 6788888777765433332221 2223321 38999999998
Q ss_pred cCCcEEEEcCCCCCccCCCCHH-HHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcc
Q 014172 227 EKSRLLILCSPSNPTGSVYPKN-LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 305 (429)
Q Consensus 227 ~~~~~i~l~~p~NPtG~~~~~~-~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 305 (429)
+++++|++++|+||+|.+++++ .+++|.++|++| |+++|+||+|.++.+.|... ......-..+ +++ ++|.++
T Consensus 186 ~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~-gi~lI~DEv~~g~g~~g~~~-~~~~~g~~~D--~~~--~~K~l~ 259 (401)
T PRK00854 186 PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTAN-NVTLILDEIQTGLGRTGKLL-AEEHEGIEAD--VTL--IGKALS 259 (401)
T ss_pred CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhCCCCCchHh-HHhhcCCCCC--EEE--eccccc
Confidence 8999999999999999999854 699999999999 99999999998765544211 1101111112 333 579998
Q ss_pred cccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCC--cee
Q 014172 306 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG--VKM 383 (429)
Q Consensus 306 ~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g--~~~ 383 (429)
...||+||+++++++++.+.......+++.+.+.+.++.++|+. .++ ..+.+.++++++++.+.|+++.. +..
T Consensus 260 gg~~~ig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~---l~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 334 (401)
T PRK00854 260 GGFYPVSAVLSNSEVLGVLKPGQHGSTFGGNPLACAVARAALKV---LTE--EGMIENAAEMGAYFLEGLRSIRSNIVRE 334 (401)
T ss_pred CCccCeEEEEEcHHHHhcccCCCCCCCCCcCHHHHHHHHHHHHH---HHH--cCHHHHHHHHHHHHHHHHHhhccCceEE
Confidence 33379999999999988876544455666789999999999875 121 33667888889999999988621 222
Q ss_pred ecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 384 SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 384 ~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
..+.|.++.+.-.++. .+..+++++|+++ ||.+
T Consensus 335 ~~g~g~~~~i~~~~~~-----------~~~~~~~~~L~~~-GV~v 367 (401)
T PRK00854 335 VRGRGLMLAVELEPEA-----------GGARQYCEALKER-GLLA 367 (401)
T ss_pred EeccceEEEEEEecCc-----------hhHHHHHHHHHHC-CeEE
Confidence 3566666554332321 2467899999876 8875
No 194
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=2.7e-22 Score=199.52 Aligned_cols=215 Identities=14% Similarity=0.180 Sum_probs=164.9
Q ss_pred CCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCC----hHHHHHHcCCEEEEecC
Q 014172 133 GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS----YPEMARIADATPVILPT 208 (429)
Q Consensus 133 G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~ 208 (429)
...+|++.+|++. | .+++ ++++++++++.+++.+++++||+|+++.|+|.. +...++..|.+++.++.
T Consensus 61 ~~~~Le~~lA~l~----g---~~~~-v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~ 132 (405)
T PRK08776 61 TRDLLGEALAELE----G---GAGG-VITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL 132 (405)
T ss_pred HHHHHHHHHHHHh----C---CCce-EEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC
Confidence 3456666676654 4 2344 555556899999999999999999999999987 34445667888888874
Q ss_pred CCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCC
Q 014172 209 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 288 (429)
Q Consensus 209 ~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~ 288 (429)
.|++.+++++++++|+|++++|+||||.+.+ +++|+++|+++ |++||+|++|.... ...++ .
T Consensus 133 -------~d~~~l~~~i~~~tklV~l~~P~NPtG~v~d---l~~I~~la~~~-gi~vIvD~a~a~~~----~~~pl-~-- 194 (405)
T PRK08776 133 -------TDPRSLADALAQSPKLVLIETPSNPLLRITD---LRFVIEAAHKV-GALTVVDNTFLSPA----LQKPL-E-- 194 (405)
T ss_pred -------CCHHHHHHhcCcCCeEEEEECCCCCCCccCC---HHHHHHHHHHc-CCEEEEECCCcccc----cCCcc-c--
Confidence 3889999999889999999999999999988 99999999999 99999999997521 11222 1
Q ss_pred CCCCceEEEeccChhcccc-cceeeEEEc-CHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 014172 289 GMWERTLTVNGFSKAFAMT-GWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRE 366 (429)
Q Consensus 289 ~~~~~~i~~~S~SK~~~~~-G~R~G~v~~-~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~ 366 (429)
.+..+++.|.+|.++.+ +...|++++ ++++.+.+.......+.+.+.+.+.++... .++++.+.++..+
T Consensus 195 --~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~g-------l~tl~~r~~~~~~ 265 (405)
T PRK08776 195 --FGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRG-------LRTLDARLRVHQE 265 (405)
T ss_pred --ccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhh-------hCcHHHHHHHHHH
Confidence 23348999999999744 467899876 577878777666555556677766555433 4567888888899
Q ss_pred HHHHHHHHhccCCCce
Q 014172 367 RRDFLVKSFGELEGVK 382 (429)
Q Consensus 367 ~r~~l~~~L~~l~g~~ 382 (429)
++..+.+.|++.|.+.
T Consensus 266 na~~la~~L~~~p~v~ 281 (405)
T PRK08776 266 NADAIAALLDGHAAVN 281 (405)
T ss_pred HHHHHHHHHHcCCCee
Confidence 9999999999887654
No 195
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.91 E-value=5.1e-22 Score=196.78 Aligned_cols=304 Identities=14% Similarity=0.142 Sum_probs=214.2
Q ss_pred cCCCeEEcCCCC--CCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCC-cEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPD-QILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~-~i~~t~G~~~al~ 169 (429)
.|+..||+..|. ..++.+|++.+++.+++.+.. .+ +.....++++++++.+.. .++ .+++++++++++.
T Consensus 27 dg~~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~~~-~~-~~~~~~~~~~~la~~l~~------~~~~~~~~~~SGseA~~ 98 (375)
T PRK04260 27 DGKKYLDFSSGIGVTNLGFHPQVQQALQKQAGLIW-HS-PNLYLNSLQEEVAQKLIG------DKDYLAFFCNSGAEANE 98 (375)
T ss_pred CCCEEEECCCCcccccCCCCHHHHHHHHHHHHhcC-cc-cCccCCHHHHHHHHHHhc------CcCCEEEEcCccHHHHH
Confidence 567799998774 445567789999999886532 22 333456788999987742 223 4689999999999
Q ss_pred HHHHHhc--CCCCEEEEcCCCCCChH-HHHHHcCCEEEE------ecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCC
Q 014172 170 QAVLAVC--SPGDEVIIPAPFWVSYP-EMARIADATPVI------LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNP 240 (429)
Q Consensus 170 ~~l~~l~--~~gd~Vlv~~p~y~~~~-~~~~~~g~~~~~------v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NP 240 (429)
.+++... ..++.|++.+.+|.+.. ..+...|.+... ++......+ .|++.+++.+.+++.+|++..++|+
T Consensus 99 ~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dl~~l~~~l~~~~a~vi~e~v~~~ 177 (375)
T PRK04260 99 AAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIF-NDLNSVKALVNKNTAAVMLELVQGE 177 (375)
T ss_pred HHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCC-CCHHHHHHhcCCCeEEEEECCeECC
Confidence 8888763 34578888888887643 344333322110 000000001 3899999988777888889999999
Q ss_pred ccCCCC-HHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHH
Q 014172 241 TGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH 319 (429)
Q Consensus 241 tG~~~~-~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~ 319 (429)
+|...+ .+.+++|.++|+++ |+++|+||+|.++...+. ........-..+ +.||||.++ +|+|+||++++++
T Consensus 178 ~G~~~~~~~~l~~~~~l~~~~-~~~~i~De~~~g~g~~g~-~~~~~~~~~~pd----i~t~sK~l~-~G~~ig~~~~~~~ 250 (375)
T PRK04260 178 SGVLPADKDFVKALADYCQET-GILLIVDEVQTGMGRTGK-LYAFEHYGIEPD----IFTLAKGLA-NGVPVGAMLAKSS 250 (375)
T ss_pred CCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhCCCcccc-hhhhHhhCCCCC----EEEeccccc-CCcceEEEEEcHH
Confidence 998754 57799999999999 999999999987644442 212111111122 458999998 8999999999999
Q ss_pred HHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCc
Q 014172 320 FVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTY 399 (429)
Q Consensus 320 ~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~ 399 (429)
+.+.+.......+++.+.+.+.++.++|+.... ++++++.++..+..++.+.+.+.+.+.+.... ..|+++|++++.
T Consensus 251 ~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~g~~~~~~~~~- 327 (375)
T PRK04260 251 LGGAFGYGSHGSTFGGNKLSMAAASATLDIMLT-AGFLEQALENGNYLQEQLQKALQDKETVTTVR-GLGYMIGIETTA- 327 (375)
T ss_pred HHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEe-ccceEEEEEecC-
Confidence 988876544455666789999999999976321 46677888888888888888887764344333 378889999842
Q ss_pred cCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 400 YGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+..++.++|.++ ||.+
T Consensus 328 ------------~~~~~~~~l~~~-Gi~v 343 (375)
T PRK04260 328 ------------DLSQLVEAARDK-GLIV 343 (375)
T ss_pred ------------cHHHHHHHHHhC-CCEE
Confidence 567899988876 8875
No 196
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.91 E-value=3.5e-22 Score=196.99 Aligned_cols=241 Identities=13% Similarity=0.139 Sum_probs=181.3
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCCC--CCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEE
Q 014172 106 DFDTPVLIAEAGINAIREGFTRYTP--NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVI 183 (429)
Q Consensus 106 ~~~~p~~v~~a~~~~~~~~~~~Y~~--~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vl 183 (429)
+++.++++.++..... .....|+. +++...|+++||++. ..+++++++|+++++..++.+++++||+|+
T Consensus 34 ~~~~~~~~~~~~~~~~-~~~~~Y~r~~npt~~~Le~~iA~le--------~~~~~~~~~sG~~Ai~~~l~all~~GD~Vv 104 (394)
T PRK09028 34 VFDTVAEMRHAAKNRA-NGEMFYGRRGTPTHFAFQAAIVELE--------GGAGTALYPSGAAAISNALLSFLKAGDHLL 104 (394)
T ss_pred ccCCHHHHHHHhccCc-cCCceecCCCCchHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEE
Confidence 4555666666554321 12244665 344579999999874 224789999999999999999999999999
Q ss_pred EcCCCCCChHHH----HHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHh
Q 014172 184 IPAPFWVSYPEM----ARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK 259 (429)
Q Consensus 184 v~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~ 259 (429)
+++|.|.++... +...|+++..++.. +.+.+++++++++|+|++++|+||||.+.+ +++|+++|++
T Consensus 105 v~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~-------~~e~l~~~l~~~TklV~lespsNPtg~v~d---l~~I~~la~~ 174 (394)
T PRK09028 105 MVDSCYEPTRDLCDKILKGFGIETTYYDPM-------IGEGIRELIRPNTKVLFLESPGSITMEVQD---VPTLSRIAHE 174 (394)
T ss_pred EECCCcHHHHHHHHHhhhhcceEEEEECCC-------CHHHHHHhcCcCceEEEEECCCCCCCcHHH---HHHHHHHHHH
Confidence 999999877653 34578888877631 567899999999999999999999998877 9999999999
Q ss_pred CCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhc-ccccceeeEEEcCHHHHHHHHHHhhcccCCCchH
Q 014172 260 HPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF-AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSI 338 (429)
Q Consensus 260 ~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~ 338 (429)
| |+++|+|++|.... ...+ + ..+.++++.|.+|.+ |-.+...|+++.++++.+.+.......+.+.+++
T Consensus 175 ~-g~~lvvD~t~a~p~----~~~P---l--~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~~~G~~~~p~ 244 (394)
T PRK09028 175 H-DIVVMLDNTWASPI----NSRP---F--EMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSYLMGQCTSPD 244 (394)
T ss_pred c-CCEEEEECCccccc----cCCc---c--ccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHHhcCCCCCHH
Confidence 9 99999999997521 1111 1 246679999999999 4445777888888887777776655566667777
Q ss_pred HHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCce
Q 014172 339 SQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK 382 (429)
Q Consensus 339 ~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~ 382 (429)
....+...|+ .+.-+.++..++...+.+.|++.|.++
T Consensus 245 ~a~l~~rgl~-------TL~lR~~~~~~na~~la~~L~~~p~v~ 281 (394)
T PRK09028 245 DVYLAMRGLR-------TLGVRLAQHEKNALKVANWLATRPEVD 281 (394)
T ss_pred HHHHHHcccC-------cHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 6554444433 366677778888888999999887653
No 197
>PRK14012 cysteine desulfurase; Provisional
Probab=99.91 E-value=2.4e-22 Score=201.14 Aligned_cols=262 Identities=15% Similarity=0.146 Sum_probs=182.0
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHH--cCCCCCC---CC------CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChH
Q 014172 97 VIRLAAGEPDFDTPVLIAEAGINAIR--EGFTRYT---PN------AGTLELRSAICHKLKEENGLSYTPDQILVSNGAK 165 (429)
Q Consensus 97 ~i~L~~g~~~~~~p~~v~~a~~~~~~--~~~~~Y~---~~------~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~ 165 (429)
.|.|+.+... ++|+.+.+++.+.+. ....... .. ....++|+.+++++ | .++++|++++|++
T Consensus 4 ~iyld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~----g--~~~~~v~~~~g~t 76 (404)
T PRK14012 4 PIYLDYSATT-PVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLI----G--ADPREIVFTSGAT 76 (404)
T ss_pred eEEecCcCCC-CCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHc----C--cCcCeEEEeCCHH
Confidence 3667666654 457888999888775 2211111 00 11234555565554 4 4567899999999
Q ss_pred HHHHHHHHHhc----CCCCEEEEcCCCCCChHHHHH---HcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCC
Q 014172 166 QSILQAVLAVC----SPGDEVIIPAPFWVSYPEMAR---IADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPS 238 (429)
Q Consensus 166 ~al~~~l~~l~----~~gd~Vlv~~p~y~~~~~~~~---~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~ 238 (429)
+++++++.++. ++||+|+++.++|+++...++ ..|++++.++.++ ++.+|++.|+++++++++++++++++
T Consensus 77 ~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~--~g~~d~~~l~~~i~~~t~lv~~~~~~ 154 (404)
T PRK14012 77 ESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQS--NGIIDLEKLEAAMRDDTILVSIMHVN 154 (404)
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCC--CCcCCHHHHHHhcCCCCEEEEEECcC
Confidence 99998887764 789999999999988755443 4599999998863 45689999999999999999999999
Q ss_pred CCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCH
Q 014172 239 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK 318 (429)
Q Consensus 239 NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~ 318 (429)
||||.+++ +++|.++|+++ ++++|+|++++. |..+..+.. .+..+++.|++|.+| ++ ++|++++++
T Consensus 155 n~tG~~~~---~~~I~~la~~~-g~~vivD~a~~~----g~~~~~~~~----~~~D~~~~s~~K~~g-p~-g~G~l~~~~ 220 (404)
T PRK14012 155 NEIGVIQD---IAAIGEICRER-GIIFHVDAAQSV----GKVPIDLSK----LKVDLMSFSAHKIYG-PK-GIGALYVRR 220 (404)
T ss_pred CCccchhh---HHHHHHHHHHc-CCEEEEEcchhc----CCcccCccc----CCCCEEEEehhhccC-CC-ceEEEEEec
Confidence 99999999 89999999999 999999999875 222222222 234478889999887 44 689988776
Q ss_pred HHHHHHHHHh------hcccC-CCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceee
Q 014172 319 HFVAACNKIQ------SQFTS-GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (429)
Q Consensus 319 ~~~~~l~~~~------~~~~~-~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~ 384 (429)
+....+.... ..+.. +++.....+..+++.. ...+.....+++++.++++.+.|++++++.+.
T Consensus 221 ~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~---~~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~ 290 (404)
T PRK14012 221 KPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARI---AKEEMATENERIRALRDRLWNGIKDIEEVYLN 290 (404)
T ss_pred CCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 5332221110 00111 2233333333345543 23345667788888999999999888777664
No 198
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.90 E-value=4.3e-22 Score=197.05 Aligned_cols=217 Identities=13% Similarity=0.130 Sum_probs=165.2
Q ss_pred CCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHH---HHcCCEEEEe
Q 014172 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA---RIADATPVIL 206 (429)
Q Consensus 130 ~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~---~~~g~~~~~v 206 (429)
.++...+|++.+|++++ .+++++++|+++++..++.+++++||+|+++.|+|.++...+ +..|++++.+
T Consensus 51 ~np~~~~lE~~lA~l~g--------~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~ 122 (385)
T PRK08574 51 ENPTLRPLEEALAKLEG--------GVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLA 122 (385)
T ss_pred CCccHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEE
Confidence 34567889999999863 357888899999999999999999999999999999987665 4457777665
Q ss_pred cCCCCCCCCCCHHHHHhhccc-CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccc
Q 014172 207 PTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (429)
Q Consensus 207 ~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~ 285 (429)
+ +|++++++++++ ++++|++++|+||||.+++ +++|+++|+++ |++||+|++|..... ..++
T Consensus 123 ~--------~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~-gi~livD~t~a~~~~----~~~l- 185 (385)
T PRK08574 123 Y--------PSTEDIIEAIKEGRTKLVFIETMTNPTLKVID---VPEVAKAAKEL-GAILVVDNTFATPLL----YRPL- 185 (385)
T ss_pred C--------CCHHHHHHhcCccCceEEEEECCCCCCCEecC---HHHHHHHHHHc-CCEEEEECCCCcccc----CChh-
Confidence 3 368999999988 8999999999999999999 88999999999 999999999964221 1111
Q ss_pred cCCCCCCceEEEeccChhcccccce-eeEEEc-CHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHH
Q 014172 286 SLPGMWERTLTVNGFSKAFAMTGWR-LGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (429)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~~~~G~R-~G~v~~-~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~ 363 (429)
..+.++++.|++|.++.+|-. .|++++ ++++.+.++......+.+.+.+....+...|+ .+..+.++
T Consensus 186 ----~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~-------tL~~R~~~ 254 (385)
T PRK08574 186 ----RHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLK-------TLEVRFER 254 (385)
T ss_pred ----hhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccC-------cHHHHHHH
Confidence 134569999999999756655 475554 67888888776665555566654443333333 35556666
Q ss_pred HHHHHHHHHHHhccCCCce
Q 014172 364 FRERRDFLVKSFGELEGVK 382 (429)
Q Consensus 364 ~~~~r~~l~~~L~~l~g~~ 382 (429)
..++...+.+.|++.|.++
T Consensus 255 ~~~na~~la~~L~~~p~v~ 273 (385)
T PRK08574 255 QCRNAMAIAEFLSEHPKVA 273 (385)
T ss_pred HHHHHHHHHHHHHcCCCcC
Confidence 6778888888888776654
No 199
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.90 E-value=4.7e-23 Score=189.16 Aligned_cols=341 Identities=15% Similarity=0.169 Sum_probs=250.4
Q ss_pred cccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCC--CCCCC---hHHHHHHHHHHHH-cCCCCCCCCCCCHHHHHHHH
Q 014172 69 SPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGE--PDFDT---PVLIAEAGINAIR-EGFTRYTPNAGTLELRSAIC 142 (429)
Q Consensus 69 s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~--~~~~~---p~~v~~a~~~~~~-~~~~~Y~~~~G~~~lr~~ia 142 (429)
-.++..-+|.++.-+.+..+. ...+..|||+.|. -+... -+.|.+|..+... +..-.|.|-.|.+++.+..+
T Consensus 28 ~s~V~maPpDpILGVTeAfk~--D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sa 105 (427)
T KOG1411|consen 28 WSHVEMAPPDPILGVTEAFKK--DPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSA 105 (427)
T ss_pred hhcCCCCCCCCcccHHHHHhc--CCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHHHH
Confidence 345555566666555554432 3455789999997 23222 3677777766554 23457999999999999999
Q ss_pred HHHHhhcCCCCCCCcEE--EecChHHHHHHHHHHh--cCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCH
Q 014172 143 HKLKEENGLSYTPDQIL--VSNGAKQSILQAVLAV--CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDP 218 (429)
Q Consensus 143 ~~l~~~~g~~~~~~~i~--~t~G~~~al~~~l~~l--~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 218 (429)
++.-......+..++|+ .|-++|.++......+ .-++..|.+++|+|.++..+...+|+.+..+........++|.
T Consensus 106 kLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~ 185 (427)
T KOG1411|consen 106 KLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDF 185 (427)
T ss_pred HHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccccccch
Confidence 98743322334455664 3446777776543333 3478999999999999999999999999888876556677899
Q ss_pred HHHHhhcccC--CcEEEE-cCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCC--CCCCccccCCCCCCc
Q 014172 219 KVLESKLTEK--SRLLIL-CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP--ATHTSFASLPGMWER 293 (429)
Q Consensus 219 e~l~~~l~~~--~~~i~l-~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~--~~~~~~~~~~~~~~~ 293 (429)
+.+.+.+... -..|++ ...|||||+..+.|+|++|.++.++. +.+.+.|-+|..|.-++ .....++-+......
T Consensus 186 ~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k-~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~ 264 (427)
T KOG1411|consen 186 KGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEK-NLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHE 264 (427)
T ss_pred HHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhc-cccchhhhhhcccccCCchhhHHHHHHHHHcCCc
Confidence 8887777642 223333 45599999999999999999999999 99999999999987653 222344445555678
Q ss_pred eEEEeccChhcccccceeeEEE--c-CHH----HHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHH---HHHHHH
Q 014172 294 TLTVNGFSKAFAMTGWRLGYIA--G-PKH----FVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVV---SKMVKA 363 (429)
Q Consensus 294 ~i~~~S~SK~~~~~G~R~G~v~--~-~~~----~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~---~~~~~~ 363 (429)
++++.||.|.+|+.|-|+|.+. + +.+ +-.+++.+.++..++|+..+..++...|.+.....+|+ +.+.++
T Consensus 265 ~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadR 344 (427)
T KOG1411|consen 265 ILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADR 344 (427)
T ss_pred eEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHh
Confidence 8999999999999999999863 3 333 34456677788899999999999999998865555664 457788
Q ss_pred HHHHHHHHHHHhccC--CC-ceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 364 FRERRDFLVKSFGEL--EG-VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 364 ~~~~r~~l~~~L~~l--~g-~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+...|+.+.+.|++. ++ |++...+-|||+|..+. .+..+.|.+++.|++
T Consensus 345 i~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~fTgl~----------------peQv~~l~ke~~iYm 396 (427)
T KOG1411|consen 345 IISMRQQLFDALEKEGSPGNWSHITKQIGMFCFTGLN----------------PEQVDWLTKEYHIYL 396 (427)
T ss_pred hhhhHHHHhHHhhcCCCCccHHHHHHhhheeeecCCC----------------HHHHHHHHhhheeee
Confidence 899999999999884 22 55567888999987663 366778888887764
No 200
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.90 E-value=7.7e-22 Score=197.31 Aligned_cols=262 Identities=15% Similarity=0.155 Sum_probs=187.3
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCC---CC------CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHH
Q 014172 97 VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYT---PN------AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (429)
Q Consensus 97 ~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~---~~------~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~a 167 (429)
.|.|+.+.+. +.|+.+++++.+.+.....+.. .. ....++|+.++++ +| .++++|++|+|++++
T Consensus 4 ~~yld~aa~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~----~g--~~~~~v~~~~g~t~a 76 (402)
T TIGR02006 4 PIYLDYAATT-PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAEL----IG--ADSREIVFTSGATES 76 (402)
T ss_pred cEEeeCCcCC-CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHH----hC--CCCCeEEEeCCHHHH
Confidence 4677766655 4578899998887753221110 00 1123445555555 45 467899999999999
Q ss_pred HHHHHHHhc----CCCCEEEEcCCCCCChHHHH---HHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCC
Q 014172 168 ILQAVLAVC----SPGDEVIIPAPFWVSYPEMA---RIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNP 240 (429)
Q Consensus 168 l~~~l~~l~----~~gd~Vlv~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NP 240 (429)
+..++.++. ++||+|+++.+.|+++...+ +..|++++.+++++ ++.+|++.++++++++++++++++++||
T Consensus 77 ~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~v~~~~n~ 154 (402)
T TIGR02006 77 NNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKS--NGLIDLEELKAAIRDDTILVSIMHVNNE 154 (402)
T ss_pred HHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhcCCCCEEEEEECCCcC
Confidence 998887763 68999999999999866543 45699999999863 4568999999999989999999999999
Q ss_pred ccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHH
Q 014172 241 TGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF 320 (429)
Q Consensus 241 tG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~ 320 (429)
||.+.+ +++|.++|+++ |+++++|++++. +..+..+.. .+..+++.|++|.+|.+| +|+++..++.
T Consensus 155 tG~~~~---~~~I~~l~~~~-g~~livD~a~a~----g~~~~~~~~----~~~D~~~~s~~K~~gp~G--~G~l~~~~~~ 220 (402)
T TIGR02006 155 IGVIQD---IAAIGEICRER-KVFFHVDAAQSV----GKIPINVNE----LKVDLMSISGHKIYGPKG--IGALYVRRKP 220 (402)
T ss_pred ceeccc---HHHHHHHHHHc-CCEEEEEcchhc----CCcccCccc----cCCCEEEEehhhhcCCCc--eEEEEEccCC
Confidence 999999 88999999999 999999999875 222222221 345588889999887446 8888877543
Q ss_pred HHHHHHHh-------hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceee
Q 014172 321 VAACNKIQ-------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (429)
Q Consensus 321 ~~~l~~~~-------~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~ 384 (429)
...+.... .....+++.....++..+++. ..++++...+++++.++.+.+.|++++++.+.
T Consensus 221 ~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~---~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~ 288 (402)
T TIGR02006 221 RVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRI---AKEEMAQDTAHVLALRDRLLNGIKSIEEVYLN 288 (402)
T ss_pred CCCCCceecCCCccCCccCCCccHHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 32222110 111223455555555566764 34567788889999999999999988887765
No 201
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.90 E-value=5.7e-22 Score=199.36 Aligned_cols=321 Identities=12% Similarity=0.080 Sum_probs=208.6
Q ss_pred hcCCCeEEcCCCCCCCCC---hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 92 QAGVSVIRLAAGEPDFDT---PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 92 ~~g~~~i~L~~g~~~~~~---p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
..|+..+|+..|...... ++.+.+++.+++.+..+.+.+..+.+ ...++++++....+.... +.+++++++++++
T Consensus 38 ~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~~~~~~~-~~~~la~~l~~~~~~~~~-~~~~f~~sGsea~ 115 (425)
T PRK08088 38 VEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYE-PYLELCEKMNQKVPGDFA-KKTLLVTTGSEAV 115 (425)
T ss_pred CCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccccccCCH-HHHHHHHHHHHhCCCCCC-CEEEEeCCcHHHH
Confidence 367789999888755443 78999999999876432332222333 345788888776553322 4677777777777
Q ss_pred HHHHHHhc--CCCCEEEEcCCCCCChHHHHHHcCCEEE--------------E--ecCCCCCCCCC--CHHHHHhhcc--
Q 014172 169 LQAVLAVC--SPGDEVIIPAPFWVSYPEMARIADATPV--------------I--LPTRISENFLL--DPKVLESKLT-- 226 (429)
Q Consensus 169 ~~~l~~l~--~~gd~Vlv~~p~y~~~~~~~~~~g~~~~--------------~--v~~~~~~~~~~--d~e~l~~~l~-- 226 (429)
..+++... .....|+...++|.+....+...+.... . +|... ++... +++.+++.+.
T Consensus 116 e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~l~~~l~~~ 194 (425)
T PRK08088 116 ENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPL-HGVSEDDAIASIERIFKND 194 (425)
T ss_pred HHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccc-cCccHHHHHHHHHHHHHhc
Confidence 76666542 1234566679999988766555443211 1 12111 11111 1456777774
Q ss_pred ---cCCcEEEE-cCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccCh
Q 014172 227 ---EKSRLLIL-CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSK 302 (429)
Q Consensus 227 ---~~~~~i~l-~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 302 (429)
++..+|++ +..+|+++...+.+.+++|.++|++| ++++|+||+|.++.+.+. ..++.. .+.+..+.||||
T Consensus 195 ~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~-~~~lI~Dev~~g~g~~g~-~~~~~~----~~~~pdi~s~sK 268 (425)
T PRK08088 195 AAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEH-GIMLIADEVQTGAGRTGT-LFAMEQ----MGVAADLTTFAK 268 (425)
T ss_pred cCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCcc-hhHHhh----cCCCCCEEEEec
Confidence 34455555 33367777788999999999999999 999999999998655442 112111 133345899999
Q ss_pred hcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCce
Q 014172 303 AFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK 382 (429)
Q Consensus 303 ~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~ 382 (429)
.++ +|+|+||+++++++++.+.......+++.+.+.|.++.++|+.... +++++++++..+++++.+.+.+.+.|.+.
T Consensus 269 ~l~-~G~rig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ 346 (425)
T PRK08088 269 SIA-GGFPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQ-ENLLQKANALGEKLKDGLLAIAEKHPEIG 346 (425)
T ss_pred ccc-CCCcceeeEecHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 999 9999999999999999887766667778899999999999986432 45566666666666666665555565443
Q ss_pred eecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 383 MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 383 ~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+.+. |+++|+.+........ .......++.++|+++ ||.+
T Consensus 347 ~v~g~-G~~~~l~l~~~~~~~~---p~~~~~~~l~~~~~~~-Gv~~ 387 (425)
T PRK08088 347 DVRGL-GAMIAIELFEDGDHSK---PNAKLTAQIVARARDK-GLIL 387 (425)
T ss_pred EEecc-ceEEEEEEecCCCCCC---CCHHHHHHHHHHHHhC-CCEE
Confidence 33344 7779999843100000 0001367888888876 7653
No 202
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.90 E-value=5.8e-22 Score=195.15 Aligned_cols=217 Identities=19% Similarity=0.178 Sum_probs=164.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHH----HHcCC
Q 014172 126 TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADA 201 (429)
Q Consensus 126 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~ 201 (429)
.+| +++...+|+++++++. . +++++++++++++..++.+++++||+|+++.|+|..+...+ ...|+
T Consensus 46 ~ry-~~p~~~~Le~~lA~l~--------~-~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~ 115 (366)
T PRK07582 46 GRA-SNPTWRALEAALGELE--------G-AEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGV 115 (366)
T ss_pred ECC-CCccHHHHHHHHHHHc--------C-CCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeE
Confidence 445 6778899999999885 2 34566666678999999999999999999999999887654 45799
Q ss_pred EEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCC
Q 014172 202 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 281 (429)
Q Consensus 202 ~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~ 281 (429)
+++.++.+.. .+ .+.+++++|++++|+||||.+.+ +++|+++|+++ |+++|+|++|... .+..
T Consensus 116 ~v~~v~~~~~------~~----~~~~~t~lV~le~p~NPtg~v~d---i~~I~~~a~~~-g~~lvVD~t~~~~--~~~~- 178 (366)
T PRK07582 116 TVREAPTAGM------AE----AALAGADLVLAETPSNPGLDVCD---LAALAAAAHAA-GALLVVDNTTATP--LGQR- 178 (366)
T ss_pred EEEEECCCCh------HH----HhccCceEEEEECCCCCCCCccC---HHHHHHHHHHc-CCEEEEECCCCCc--cccC-
Confidence 9999986421 11 22357899999999999999988 99999999999 9999999999642 1211
Q ss_pred CccccCCCCCCceEEEeccChhc-ccccceeeEEEc-CHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHH
Q 014172 282 TSFASLPGMWERTLTVNGFSKAF-AMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 359 (429)
Q Consensus 282 ~~~~~~~~~~~~~i~~~S~SK~~-~~~G~R~G~v~~-~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~ 359 (429)
++ . .+..+++.|++|.+ |.+|.|+||+++ ++++++.+..+....+.+++.+....+...+.. +..
T Consensus 179 -p~-~----~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~t-------l~~ 245 (366)
T PRK07582 179 -PL-E----LGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSLGT-------LGL 245 (366)
T ss_pred -ch-h----cCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhcccc-------HHH
Confidence 11 1 23348899999998 446799999997 578888888777666666777776655555543 444
Q ss_pred HHHHHHHHHHHHHHHhccCCCce
Q 014172 360 MVKAFRERRDFLVKSFGELEGVK 382 (429)
Q Consensus 360 ~~~~~~~~r~~l~~~L~~l~g~~ 382 (429)
..++..++...+.+.|++.|.++
T Consensus 246 R~~~~~~na~~la~~L~~~p~v~ 268 (366)
T PRK07582 246 RFARQCANALAVAELLAGHPAVR 268 (366)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcc
Confidence 55666778888888898877664
No 203
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=6e-22 Score=196.61 Aligned_cols=221 Identities=14% Similarity=0.114 Sum_probs=165.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH----HHHHcCC
Q 014172 126 TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADA 201 (429)
Q Consensus 126 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~ 201 (429)
.+| +++...+|++.++++. ..+++++++|+++++.+++.+++++||+|++++|+|..+.. .+...|+
T Consensus 60 ~r~-~~pt~~~Le~~lA~l~--------g~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi 130 (394)
T PRK07050 60 GLH-ATPTSLALAQRLAEIE--------GGRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGI 130 (394)
T ss_pred CCC-CCHHHHHHHHHHHHHh--------CCCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCe
Confidence 344 4445567777777764 34689999999999999999999999999999999998764 4567899
Q ss_pred EEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCC
Q 014172 202 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 281 (429)
Q Consensus 202 ~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~ 281 (429)
+++.++.. +.+.+++++++++|+|++++|+||+|.+.+ +++|+++|+++ +++||+|++|....+
T Consensus 131 ~v~~vd~~-------~~~~l~~~i~~~tklV~le~p~Np~~~~~d---i~~I~~ia~~~-gi~livD~a~a~~~~----- 194 (394)
T PRK07050 131 TVRFYDPL-------IGAGIADLIQPNTRLIWLEAPGSVTMEVPD---VPAITAAARAR-GVVTAIDNTYSAGLA----- 194 (394)
T ss_pred EEEEECCC-------CHHHHHHhcCCCCeEEEEECCCCCCccHhh---HHHHHHHHHHc-CCEEEEECCcccccc-----
Confidence 99988742 457889999999999999999999987666 99999999999 999999999976321
Q ss_pred CccccCCCCCCceEEEeccChhcc-cccceeeEEEc-CHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHH
Q 014172 282 TSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 359 (429)
Q Consensus 282 ~~~~~~~~~~~~~i~~~S~SK~~~-~~G~R~G~v~~-~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~ 359 (429)
+..+. .+.++++.|++|.++ ..+.+.|++++ ++++++.++..+...+.+.+.+....+...++ .+..
T Consensus 195 --~~~l~--~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~-------tl~~ 263 (394)
T PRK07050 195 --FKPFE--HGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVLRGLP-------SLQV 263 (394)
T ss_pred --cCHHH--cCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCC-------cHHH
Confidence 11111 245699999999996 23356898776 67888888877766666667665544433232 2334
Q ss_pred HHHHHHHHHHHHHHHhccCCCce
Q 014172 360 MVKAFRERRDFLVKSFGELEGVK 382 (429)
Q Consensus 360 ~~~~~~~~r~~l~~~L~~l~g~~ 382 (429)
+.++..++...+.+.|++.|++.
T Consensus 264 Rl~~~~~~a~~la~~L~~~p~v~ 286 (394)
T PRK07050 264 RLAAHDRSALEVAEWLKARPEIA 286 (394)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcc
Confidence 55555666667778887776654
No 204
>PLN02651 cysteine desulfurase
Probab=99.90 E-value=1.4e-21 Score=192.92 Aligned_cols=288 Identities=16% Similarity=0.133 Sum_probs=198.0
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHcCCCCCC---CC--CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHH
Q 014172 100 LAAGEPDFDTPVLIAEAGINAIREGFTRYT---PN--AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (429)
Q Consensus 100 L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~---~~--~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 174 (429)
|+.+-+. +.|+.+.+++.+.+.....+-. .. ....++.+.+.+.+.+.+| .++++|++|+|++++++.++..
T Consensus 3 ld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g--~~~~~v~~t~~~t~a~~~~l~~ 79 (364)
T PLN02651 3 LDMQATT-PIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIG--ADPKEIIFTSGATESNNLAIKG 79 (364)
T ss_pred ccCcCCC-CCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhC--CCCCeEEEeCCHHHHHHHHHHH
Confidence 4444443 4578899999887753211100 00 1112333344444444555 4678999999999998877765
Q ss_pred h----cCCCCEEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCH
Q 014172 175 V----CSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPK 247 (429)
Q Consensus 175 l----~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~ 247 (429)
+ .++||+|++....|+++.. .++..|++++.++.+ .++.+|+++++++++++++++++++++|+||.++|
T Consensus 80 ~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~- 156 (364)
T PLN02651 80 VMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVK--SDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQP- 156 (364)
T ss_pred HHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhcCCCcEEEEEECCCCCceeccc-
Confidence 4 4789999999988876543 334579999999885 34568999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHH
Q 014172 248 NLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI 327 (429)
Q Consensus 248 ~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~ 327 (429)
+++|.++|++| |+++++|.+++. |..+..+.. .+..+++.|.+|.+|. ..+|+++.+++....+...
T Consensus 157 --l~~I~~~~~~~-g~~~~vD~a~~~----g~~~~~~~~----~~~D~~~~s~hK~~gp--~G~g~l~v~~~~~~~l~p~ 223 (364)
T PLN02651 157 --VEEIGELCREK-KVLFHTDAAQAV----GKIPVDVDD----LGVDLMSISGHKIYGP--KGVGALYVRRRPRVRLEPL 223 (364)
T ss_pred --HHHHHHHHHHc-CCEEEEEcchhh----CCcccCccc----CCCCEEEechhhhCCC--CceEEEEEcCCCCCCCCcc
Confidence 89999999999 999999999985 222222222 3556999999996553 3489998877554433211
Q ss_pred h-------hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc-CCCceeecCCc-----eEEEEE
Q 014172 328 Q-------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQG-----AFYLFI 394 (429)
Q Consensus 328 ~-------~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-l~g~~~~~p~~-----~~~~~~ 394 (429)
. .....+++.....++.++|+. ..+..++..++.++.++++.+.|++ ++|+++..|.. ...+.+
T Consensus 224 ~~g~~~~~~~~~GT~~~~~~~~l~~al~~---~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~ 300 (364)
T PLN02651 224 MSGGGQERGRRSGTENTPLVVGLGAACEL---AMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNL 300 (364)
T ss_pred ccCCCccCCccCCCccHHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEE
Confidence 1 112234566666667777765 2344567778888999999999986 68888876411 223555
Q ss_pred ecCCccCCcccCCCCCCChHHHHHHHH
Q 014172 395 DFSTYYGSEAEGFGKIENSESLCRYLL 421 (429)
Q Consensus 395 ~l~~~~~~~~~~~~~~~~~~~~~~~Ll 421 (429)
.+++. +..++..+|.
T Consensus 301 ~~~~~------------~~~~~~~~L~ 315 (364)
T PLN02651 301 SFAYV------------EGESLLMGLK 315 (364)
T ss_pred EeCCC------------CHHHHHHHhC
Confidence 66542 6778888874
No 205
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.89 E-value=4.4e-21 Score=191.84 Aligned_cols=307 Identities=14% Similarity=0.159 Sum_probs=207.1
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..||+..|. ..++. +|++.+++.+++.+.. .++. ....+....+++.+.+..+ .+.+++++++++++.
T Consensus 37 dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~-~~~~-~~~~~~~~~la~~l~~~~~----~~~v~~~~sGseA~e 110 (406)
T PRK12381 37 QGKEYIDFAGGIAVNALGHAHPALREALNEQASKFW-HTGN-GYTNEPVLRLAKKLIDATF----ADRVFFCNSGAEANE 110 (406)
T ss_pred CCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcc-cccC-ccCCHHHHHHHHHHHhhCC----CCeEEEcCCcHHHHH
Confidence 577899998764 23333 7899999999886521 1211 1123344556666654432 369999999999999
Q ss_pred HHHHHhc--------CCCCEEEEcCCCCCChHHHHHHcCCEEEE----ecCCC--CCCCCCCHHHHHhhcccCCcEEEEc
Q 014172 170 QAVLAVC--------SPGDEVIIPAPFWVSYPEMARIADATPVI----LPTRI--SENFLLDPKVLESKLTEKSRLLILC 235 (429)
Q Consensus 170 ~~l~~l~--------~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~----v~~~~--~~~~~~d~e~l~~~l~~~~~~i~l~ 235 (429)
.+++... .....|+..+.+|++....+...+..... .++.+ ....-.|++.+++.+.+++++|++
T Consensus 111 ~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavii- 189 (406)
T PRK12381 111 AALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTCAVIV- 189 (406)
T ss_pred HHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCeeEEEE-
Confidence 9988752 13467999999999876544433322110 01100 000113889999999877777777
Q ss_pred CCCCCccCCC--CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeE
Q 014172 236 SPSNPTGSVY--PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY 313 (429)
Q Consensus 236 ~p~NPtG~~~--~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~ 313 (429)
.|.|++|-++ +.+.+++|.++|++| |+++|+||+|.++.+.|.. .......-..+ +.||||.++ +|+|+||
T Consensus 190 EPv~~~gg~~~~~~~~l~~l~~l~~~~-~~llI~DEv~tG~gr~G~~-~~~~~~~v~pD----i~t~sK~l~-gG~~ig~ 262 (406)
T PRK12381 190 EPIQGEGGVIPADKAFLQGLRELCDRH-NALLIFDEVQTGVGRTGEL-YAYMHYGVTPD----VLTTAKALG-GGFPIGA 262 (406)
T ss_pred eCCcCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEcchhhCCCCCcch-hhhHhhCCCCC----EEEehhhhh-CCCceEE
Confidence 6899998765 689999999999999 9999999999887665532 12111111112 469999999 8999999
Q ss_pred EEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC-Cce-ee-cCCceE
Q 014172 314 IAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE-GVK-MS-EPQGAF 390 (429)
Q Consensus 314 v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~-g~~-~~-~p~~~~ 390 (429)
+++++++++.+.......+++.+++.+.++.++|+. .+ -.++++.++++.+++.+.|+++. ... +. ....|+
T Consensus 263 ~~~~~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~---l~--~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl 337 (406)
T PRK12381 263 MLTTEKCASVMTVGTHGTTYGGNPLASAVAGKVLEL---IN--TPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGL 337 (406)
T ss_pred EEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHH---Hh--hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeE
Confidence 999999998887655555667899999999998875 11 23567888889999999888751 121 11 223467
Q ss_pred EEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 391 YLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 391 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++++.++.... .....+++.|+++ ||.+
T Consensus 338 ~~~~~l~~~~~---------~~~~~~~~~l~~~-Gv~v 365 (406)
T PRK12381 338 LIGCVLNAEYA---------GKAKQISQEAAKA-GVMV 365 (406)
T ss_pred EEEEEecCchh---------hHHHHHHHHHHHC-CcEE
Confidence 78888764200 1346777777665 8875
No 206
>PRK05939 hypothetical protein; Provisional
Probab=99.89 E-value=5.1e-21 Score=189.90 Aligned_cols=212 Identities=17% Similarity=0.143 Sum_probs=154.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChH---HHHHHcCCEEEEecCCCCC
Q 014172 136 ELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISE 212 (429)
Q Consensus 136 ~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~---~~~~~~g~~~~~v~~~~~~ 212 (429)
+|++.++++. | .+..+++++++.++..++.+++++||+|+++++.|+++. ..++..|++++.++.
T Consensus 51 ~lE~~la~le----g----~~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~---- 118 (397)
T PRK05939 51 ALEAKITKME----G----GVGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA---- 118 (397)
T ss_pred HHHHHHHHHh----C----CCeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC----
Confidence 7777787775 2 233455556689999999999999999999999998754 356678999999985
Q ss_pred CCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCC
Q 014172 213 NFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 292 (429)
Q Consensus 213 ~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~ 292 (429)
.|++++++++++++++|++++|+||||.+.+ +++|+++|+++ |+++|+|++|.... .+. +...+
T Consensus 119 ---~d~e~l~~~l~~~tklV~vesp~NptG~v~d---l~~I~~la~~~-gi~livD~t~a~~~-------~~~--~~~~g 182 (397)
T PRK05939 119 ---TDVQNVAAAIRPNTRMVFVETIANPGTQVAD---LAGIGALCRER-GLLYVVDNTMTSPW-------LFR--PKDVG 182 (397)
T ss_pred ---CCHHHHHHhCCCCCeEEEEECCCCCCCCHHh---HHHHHHHHHHc-CCEEEEECCccccc-------ccC--ccccC
Confidence 2899999999999999999999999999977 99999999999 99999999986421 111 11136
Q ss_pred ceEEEeccChhcccccceeeEEEcCHHH----------------------HHHHH-HHhhcccCCCchHHHHHHHHHHhc
Q 014172 293 RTLTVNGFSKAFAMTGWRLGYIAGPKHF----------------------VAACN-KIQSQFTSGASSISQKAGVAALGL 349 (429)
Q Consensus 293 ~~i~~~S~SK~~~~~G~R~G~v~~~~~~----------------------~~~l~-~~~~~~~~~~~~~~q~aa~~~l~~ 349 (429)
..+++.|+||.++..|+++|+++.+... +..+. ......+...++.....+..-
T Consensus 183 aDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rg--- 259 (397)
T PRK05939 183 ASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAAHRIAIG--- 259 (397)
T ss_pred CEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHHHHHHHcC---
Confidence 7799999999999899999998764211 11111 111233434455443333222
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHhccCCCce
Q 014172 350 GYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK 382 (429)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~ 382 (429)
-+-+..+.++..++...+.+.|++.|.++
T Consensus 260 ----l~tl~~R~~~~~~na~~la~~L~~~p~V~ 288 (397)
T PRK05939 260 ----AETLALRVDRSCSNALALAQFLEAHPKVA 288 (397)
T ss_pred ----cCcHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 23355566666778888888898877654
No 207
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.89 E-value=1.7e-21 Score=195.01 Aligned_cols=161 Identities=16% Similarity=0.209 Sum_probs=132.7
Q ss_pred CCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCCh----HHHHHHcCCEEEE
Q 014172 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSY----PEMARIADATPVI 205 (429)
Q Consensus 130 ~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~~~ 205 (429)
+++-..+|++.+|+++ | .+..++++++++++..++.+++++||+|+++.+.|.+. ...++..|++++.
T Consensus 55 ~~p~~~~le~~lA~l~----g----~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~ 126 (418)
T TIGR01326 55 MNPTTDVLEQRIAALE----G----GVAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRF 126 (418)
T ss_pred CChhHHHHHHHHHHHh----C----CCeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEE
Confidence 3344567888888775 3 24678999999999999999999999999999988653 3456778999999
Q ss_pred ecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccc
Q 014172 206 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (429)
Q Consensus 206 v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~ 285 (429)
++.+ |++.+++++++++++|++++|+||||.+.+ +++|.++|++| |+++|+|++|....+ ..+
T Consensus 127 v~~~-------d~~~l~~~l~~~t~~V~le~p~NPtg~v~d---l~~I~~la~~~-~i~livD~t~~~~~~----~~~-- 189 (418)
T TIGR01326 127 VDPD-------DPEEFEKAIDENTKAVFAETIGNPAINVPD---IEAIAEVAHAH-GVPLIVDNTFATPYL----CRP-- 189 (418)
T ss_pred ECCC-------CHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCCchhhc----CCc--
Confidence 9841 899999999999999999999999999998 88999999999 999999999974211 111
Q ss_pred cCCCCCCceEEEeccChhcccccceeeEEEcCH
Q 014172 286 SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK 318 (429)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~ 318 (429)
+ ..+.++++.||||.++.+|+|+||++++.
T Consensus 190 -l--~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 190 -I--DHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred -h--hcCCeEEEECccccccCCccceEEEEEec
Confidence 1 13567999999999998999999998854
No 208
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.89 E-value=2.7e-20 Score=182.82 Aligned_cols=270 Identities=19% Similarity=0.247 Sum_probs=189.4
Q ss_pred HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCEEEEcCCCCCChH
Q 014172 115 EAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYP 193 (429)
Q Consensus 115 ~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l-~~~gd~Vlv~~p~y~~~~ 193 (429)
+++.+.+.++.. +......++++.++++++ .+++++++|+++++..++.++ +++||+|+++.++|.++.
T Consensus 3 ~~~~~~~~~~~~--~~~~~~~~~~~~la~~~~--------~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~ 72 (352)
T cd00616 3 EAVEEVLDSGWL--TLGPKVREFEKAFAEYLG--------VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATA 72 (352)
T ss_pred HHHHHHHHcCCc--cCCHHHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHH
Confidence 455666666443 334457889999998873 246888889999999999998 589999999999999999
Q ss_pred HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcc
Q 014172 194 EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 273 (429)
Q Consensus 194 ~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~ 273 (429)
..+...|++++.+++++ +++.+|++.+++.+++++++|+++ |++|.+.+ +++|.++|+++ ++++|+|++|..
T Consensus 73 ~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~~~---~~~i~~l~~~~-~i~li~D~a~~~ 144 (352)
T cd00616 73 NAILLLGATPVFVDIDP-DTYNIDPELIEAAITPRTKAIIPV---HLYGNPAD---MDAIMAIAKRH-GLPVIEDAAQAL 144 (352)
T ss_pred HHHHHcCCeEEEEecCC-CcCCcCHHHHHHhcCcCCeEEEEE---CCCCCcCC---HHHHHHHHHHc-CCeEEEECCCCC
Confidence 99999999999999864 357789999999998899999875 47999988 88899999999 999999999985
Q ss_pred cccCCCCCCccccCCCCCCceEEEeccC--hhcccccceeeEEEcC-HHHHHHHHHHhhcc---------------cCCC
Q 014172 274 IIYAPATHTSFASLPGMWERTLTVNGFS--KAFAMTGWRLGYIAGP-KHFVAACNKIQSQF---------------TSGA 335 (429)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~~~~G~R~G~v~~~-~~~~~~l~~~~~~~---------------~~~~ 335 (429)
....... .+.. ...+.+.||+ |.+ ++.+.|+++.+ +++.+.+....... ....
T Consensus 145 g~~~~~~--~~~~-----~~d~~~~S~~~~K~~--~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (352)
T cd00616 145 GATYKGR--KVGT-----FGDAGAFSFHPTKNL--TTGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRL 215 (352)
T ss_pred CCeECCE--Eccc-----CcceeEEcCCCCCCC--cccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCc
Confidence 3221110 1111 1236677876 877 34456888775 57777665543211 1112
Q ss_pred chHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCc-----eEEEEEecCCccCCcccCCCCC
Q 014172 336 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG-----AFYLFIDFSTYYGSEAEGFGKI 410 (429)
Q Consensus 336 ~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~-----~~~~~~~l~~~~~~~~~~~~~~ 410 (429)
+.+...++... .+.+++..++.+++.+++.+.|.+++|+++..+.. ...+.+.++... .
T Consensus 216 ~~~~aa~~~~~-------l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 279 (352)
T cd00616 216 SEIQAAIGLAQ-------LEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEA---------G 279 (352)
T ss_pred CHHHHHHHHHH-------HHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcC---------C
Confidence 22222222221 23456677777889999999999988888764322 233445555200 0
Q ss_pred CChHHHHHHHHHhCCeec
Q 014172 411 ENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 411 ~~~~~~~~~Ll~~~gV~v 428 (429)
.+..++.+.|.++ ||.+
T Consensus 280 ~~~~~v~~~L~~~-gI~~ 296 (352)
T cd00616 280 ESRDELIEALKEA-GIET 296 (352)
T ss_pred CCHHHHHHHHHHC-CCCe
Confidence 3678899988665 8854
No 209
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.89 E-value=7e-21 Score=186.90 Aligned_cols=233 Identities=13% Similarity=0.148 Sum_probs=171.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCE-EE
Q 014172 126 TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADAT-PV 204 (429)
Q Consensus 126 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~-~~ 204 (429)
.+| +++...+|++++|++. ..+++++++|+++++.+++ .++++||+|+++.+.|......+.....+ -+
T Consensus 49 ~R~-~~p~~~~le~~lA~le--------g~~~~v~~~sG~aAi~~~l-~~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~ 118 (364)
T PRK07269 49 TRT-KNPTRAKLEETLAAIE--------SADYALATSSGMSAIVLAF-SVFPVGSKVVAVRDLYGGSFRWFNQQEKEGRF 118 (364)
T ss_pred eCC-CCccHHHHHHHHHHHh--------CCCeEEEeCCHHHHHHHHH-HHhCCCCEEEEecCCcCchHHHHHHHHhcCcE
Confidence 445 4566789999999986 3578999999999999888 46799999999999998765544332111 01
Q ss_pred EecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCcc
Q 014172 205 ILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF 284 (429)
Q Consensus 205 ~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~ 284 (429)
.+ .|..|++++++++++++|+|++++|+||||.+.+ +++|+++|+++ ++++|+|++|....+. .++
T Consensus 119 ~~------~~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~d---i~~I~~la~~~-gi~vvvD~t~~~~~~~----~pl 184 (364)
T PRK07269 119 HF------TYANTEEELIAAIEEDTDIVYIETPTNPLMVEFD---IEKVAKLAHAK-GAKVIVDNTFYSPIYQ----RPI 184 (364)
T ss_pred EE------EecCCHHHHHHhcCcCceEEEEECCCCCCCeeeC---HHHHHHHHHHc-CCEEEEECCCcccccC----Cch
Confidence 11 1335899999999999999999999999999998 99999999999 9999999997642211 111
Q ss_pred ccCCCCCCceEEEeccChhcccccc-eeeEEEc-CHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHH
Q 014172 285 ASLPGMWERTLTVNGFSKAFAMTGW-RLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 362 (429)
Q Consensus 285 ~~~~~~~~~~i~~~S~SK~~~~~G~-R~G~v~~-~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~ 362 (429)
. .+..+++.|++|.++-+|- =.||+++ ++++.+.++......+.+.+.+....+...|+ .+..+.+
T Consensus 185 -~----~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~-------tL~~r~~ 252 (364)
T PRK07269 185 -E----LGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGLK-------TLSLRME 252 (364)
T ss_pred -h----hCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCC-------cHHHHHH
Confidence 1 2444999999999963332 3588887 56777777765555555666666555544444 3667777
Q ss_pred HHHHHHHHHHHHhccCCCc-eee-cCCceEEEEE
Q 014172 363 AFRERRDFLVKSFGELEGV-KMS-EPQGAFYLFI 394 (429)
Q Consensus 363 ~~~~~r~~l~~~L~~l~g~-~~~-~p~~~~~~~~ 394 (429)
+.+++...+.+.|++.|++ ++. ++.||++.+.
T Consensus 253 ~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~ 286 (364)
T PRK07269 253 RSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFK 286 (364)
T ss_pred HHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEE
Confidence 7788889999999988875 333 6788885544
No 210
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.88 E-value=4.2e-20 Score=183.46 Aligned_cols=276 Identities=17% Similarity=0.183 Sum_probs=188.9
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCEEEEcCCC
Q 014172 110 PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPF 188 (429)
Q Consensus 110 p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l-~~~gd~Vlv~~p~ 188 (429)
+++..+++.+.+.++. |+...+..+|+++++++++ .++.++++|+++++..++.++ +++||+|+++.|+
T Consensus 9 ~~~~~~~v~~~~~~~~--~~~g~~~~~le~~la~~~g--------~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~ 78 (380)
T TIGR03588 9 DQDDIDAVVEVLKSDF--LTQGPTVPAFEEALAEYVG--------AKYAVAFNSATSALHIACLALGVGPGDRVWTTPIT 78 (380)
T ss_pred CHHHHHHHHHHHhcCC--ccCChhHHHHHHHHHHHHC--------CCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcc
Confidence 3555778888877654 3334467899999999974 234566778999999999998 7899999999999
Q ss_pred CCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc----cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeE
Q 014172 189 WVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLL 264 (429)
Q Consensus 189 y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~----~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~ 264 (429)
|..+...++..|++++.++++++ ++.+|++++++.++ +++++|++ .|++|...+ +++|.++|++| |++
T Consensus 79 ~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~t~~v~~---~~~~G~~~~---~~~i~~l~~~~-~~~ 150 (380)
T TIGR03588 79 FVATANCALYCGAKVDFVDIDPD-TGNIDEDALEKKLAAAKGKLPKAIVP---VDFAGKSVD---MQAIAALAKKH-GLK 150 (380)
T ss_pred hHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHHhhcccCCCceEEEE---eCCCCccCC---HHHHHHHHHHc-CCE
Confidence 99999999999999999998753 46799999999998 78898885 456898888 89999999999 999
Q ss_pred EEEccCCcccc-cCCCCCCccccCCCCCCceEEEeccC--hhcccccceeeEEEc-CHHHHHHHHHHhhccc--------
Q 014172 265 VLSDEIYEHII-YAPATHTSFASLPGMWERTLTVNGFS--KAFAMTGWRLGYIAG-PKHFVAACNKIQSQFT-------- 332 (429)
Q Consensus 265 vi~Deay~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~~~~G~R~G~v~~-~~~~~~~l~~~~~~~~-------- 332 (429)
||+|++++... |++.. +... ..-.+.+.||+ |.++ .| ..|+++. ++++.+.++.......
T Consensus 151 lI~D~a~a~g~~~~~~~---~g~~---~~~d~~~~S~~~~K~~~-~~-~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 222 (380)
T TIGR03588 151 IIEDASHALGAEYGGKP---VGNC---RYADATVFSFHPVKIIT-TA-EGGAVTTNDEELAERMRLLRSHGITKDPLLFE 222 (380)
T ss_pred EEEECCCcccCccCCEe---CCCc---cccceEEEecCCCCccc-cc-CceEEEECCHHHHHHHHHHHHCCCCCCccccc
Confidence 99999998642 33321 1110 01247777876 8776 33 4677775 4667776654322110
Q ss_pred -----------------CCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC-C---ceEE
Q 014172 333 -----------------SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP-Q---GAFY 391 (429)
Q Consensus 333 -----------------~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p-~---~~~~ 391 (429)
...+.+....+...|+ .+++..++.+++.+++.+.|++++++....+ . .+++
T Consensus 223 ~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~-------~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 295 (380)
T TIGR03588 223 KQDEGPWYYEQQELGFNYRMTDIQAALGLSQLK-------KLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWH 295 (380)
T ss_pred ccccCcceeeeeccccccCccHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEE
Confidence 1112222222222222 2566667777788889999988877664432 1 1222
Q ss_pred EE-EecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 392 LF-IDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 392 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++ +.++...+ .+..++.+.|.++ ||.+
T Consensus 296 ~~~i~~~~~~~---------~~r~~l~~~L~~~-gI~~ 323 (380)
T TIGR03588 296 LYPILLDQEFG---------CTRKEVFEALRAA-GIGV 323 (380)
T ss_pred EEEEEECCcCC---------CCHHHHHHHHHHC-CCCc
Confidence 22 33331000 2678888888654 8864
No 211
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.88 E-value=9.6e-22 Score=188.25 Aligned_cols=221 Identities=19% Similarity=0.216 Sum_probs=153.8
Q ss_pred CHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCC
Q 014172 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISEN 213 (429)
Q Consensus 134 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~ 213 (429)
..++++.+|++++ ..+.+++++|+++++..++.+++++||+|+++.|+|.+....+...|++++.++...+.+
T Consensus 61 i~~~~~~~A~~~g-------a~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~~ 133 (294)
T cd00615 61 IKEAQELAARAFG-------AKHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNPY 133 (294)
T ss_pred HHHHHHHHHHHhC-------CCCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCcc
Confidence 5677788887763 234556699999999999999999999999999999999999999999999998764433
Q ss_pred ----CCCCHHHHHhhcc--cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcc-cccCCCCCCcccc
Q 014172 214 ----FLLDPKVLESKLT--EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPATHTSFAS 286 (429)
Q Consensus 214 ----~~~d~e~l~~~l~--~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~-~~~~~~~~~~~~~ 286 (429)
..+|++.++++++ ++++++++++| ||+|.+++ +++|+++|++| |+++|+||+|+. +.|.+..+.+..
T Consensus 134 ~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~-g~~livDeA~~~~~~~~~~~~~~~~- 207 (294)
T cd00615 134 YGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYN---LRKIVEEAHHR-GLPVLVDEAHGAHFRFHPILPSSAA- 207 (294)
T ss_pred cCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecC---HHHHHHHHHhc-CCeEEEECcchhhhccCcccCcchh-
Confidence 3689999999986 46899999998 78999999 89999999999 999999999974 334432221211
Q ss_pred CCCCCCceEEEeccChhcccccceeeEEE-cCHHH--HHHHHHHhhcc-cCCCchHHHHHHHHHHhcCCCChHHHHHHHH
Q 014172 287 LPGMWERTLTVNGFSKAFAMTGWRLGYIA-GPKHF--VAACNKIQSQF-TSGASSISQKAGVAALGLGYAGGEVVSKMVK 362 (429)
Q Consensus 287 ~~~~~~~~i~~~S~SK~~~~~G~R~G~v~-~~~~~--~~~l~~~~~~~-~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~ 362 (429)
..+.++++.|++|++ +|++.|+++ .+.+. .+.+....... +.+++.+...++..++.. ..+.-.+..+
T Consensus 208 ---~~~~div~~S~hK~l--~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~---~~~~g~~~~~ 279 (294)
T cd00615 208 ---MAGADIVVQSTHKTL--PALTQGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARAM---MALEGKELVE 279 (294)
T ss_pred ---hcCCcEEEEchhccc--chHhHHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHH---HHHHhHHHHH
Confidence 246789999999986 678776554 43331 23333332222 233444444444444432 1112223344
Q ss_pred HHHHHHHHHHHHh
Q 014172 363 AFRERRDFLVKSF 375 (429)
Q Consensus 363 ~~~~~r~~l~~~L 375 (429)
+..++.+.+++.|
T Consensus 280 ~~~~~~~~~r~~l 292 (294)
T cd00615 280 ELIELALYARQEI 292 (294)
T ss_pred HHHHHHHHHHHHH
Confidence 4555555555554
No 212
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.88 E-value=1.2e-20 Score=188.69 Aligned_cols=308 Identities=15% Similarity=0.085 Sum_probs=197.2
Q ss_pred cCCCeEEcCCCCCCCC---ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGEPDFD---TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~~~~~---~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.++|+..|..... .+|.+.+++.+.+....+.. .. -..+..+.+++.+.+..+ .+.+++++++++++.
T Consensus 29 dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~-~~-~~~~~~~~~~~~l~~~~~----~~~~~~~~SGs~A~e 102 (400)
T PTZ00125 29 EGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTS-RA-FYNDVLGLAEKYITDLFG----YDKVLPMNSGAEAGE 102 (400)
T ss_pred CCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhccccc-cc-ccCHHHHHHHHHHHhCCC----CCEEEEeCCcHHHHH
Confidence 5678999988865443 37889999999876422211 11 113355556666655443 358899999999999
Q ss_pred HHHHHhcC----------CCCEEEEcCCCCCChHHH-HHHcCCEEEE---ecCCCC--CCCCCCHHHHHhhcc-cCCcEE
Q 014172 170 QAVLAVCS----------PGDEVIIPAPFWVSYPEM-ARIADATPVI---LPTRIS--ENFLLDPKVLESKLT-EKSRLL 232 (429)
Q Consensus 170 ~~l~~l~~----------~gd~Vlv~~p~y~~~~~~-~~~~g~~~~~---v~~~~~--~~~~~d~e~l~~~l~-~~~~~i 232 (429)
.+++.... .++.|++.+-+|.+.... ....+..... .+..+. .-...|++.+++.+. +++++|
T Consensus 103 ~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v 182 (400)
T PTZ00125 103 TALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAF 182 (400)
T ss_pred HHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEE
Confidence 99987641 246788888877765433 3332221110 011000 000138999999986 678999
Q ss_pred EEcCCCCCccCCCC-HHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccccccee
Q 014172 233 ILCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRL 311 (429)
Q Consensus 233 ~l~~p~NPtG~~~~-~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~ 311 (429)
++..++||||.+++ .+.+++|.++|++| |+++|+||+|.++.+.|... .. ...+.... +.+|||.++.+++|+
T Consensus 183 ~~ep~~~~~G~~~~~~~~l~~l~~l~~~~-~~lli~Dev~~g~g~~G~~~-~~-~~~~~~pd---~~~~sK~l~~g~~~i 256 (400)
T PTZ00125 183 IVEPIQGEAGVIVPDDGYLKQVYELCKKY-NVLLIVDEIQTGLGRTGKLL-AH-DHEGVKPD---IVLLGKALSGGLYPI 256 (400)
T ss_pred EEcCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCccchhh-HH-HhcCCCCC---EEEEcccccCCCcCc
Confidence 99889999999996 45699999999999 99999999998765544311 11 11111111 335789998544699
Q ss_pred eEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC----CCceeecCC
Q 014172 312 GYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL----EGVKMSEPQ 387 (429)
Q Consensus 312 G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l----~g~~~~~p~ 387 (429)
||+++++++++.+.......+++.+.+.+.++.++|+. .++ ....+..+++.+++.+.|+++ +.+....+.
T Consensus 257 g~v~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~---i~~--~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~ 331 (400)
T PTZ00125 257 SAVLANDDVMLVIKPGEHGSTYGGNPLACAVAVEALEV---LKE--EKLAENAQRLGEVFRDGLKELLKKSPWVKEIRGK 331 (400)
T ss_pred EEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHH---HHh--cCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEecc
Confidence 99999999998876544445566788888888887764 111 122344444555555555543 333334554
Q ss_pred ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 388 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|.++|+.++... ..+..+++++|+++ ||.+
T Consensus 332 -g~~~~v~~~~~~---------~~~~~~~~~~l~~~-Gv~v 361 (400)
T PTZ00125 332 -GLLNAIVFDHSD---------GVNAWDLCLKLKEN-GLLA 361 (400)
T ss_pred -cEEEEEEEccCc---------chHHHHHHHHHHHC-CeEE
Confidence 455777775310 02567899998865 8875
No 213
>PRK05968 hypothetical protein; Provisional
Probab=99.88 E-value=8.7e-21 Score=188.20 Aligned_cols=216 Identities=14% Similarity=0.144 Sum_probs=160.2
Q ss_pred CCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChH----HHHHHcCCEEEEecC
Q 014172 133 GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVILPT 208 (429)
Q Consensus 133 G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~ 208 (429)
...+|++.++++++ . +..+++++++.++..++.+++++||+|+++.+.|.... ..+...|++++.++.
T Consensus 64 ~~~~le~~lA~l~g-------~-~~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (389)
T PRK05968 64 TVRAFEEMLAKLEG-------A-EDARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG 135 (389)
T ss_pred hHHHHHHHHHHHhC-------C-CcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC
Confidence 35678888888763 2 23455566678999999999999999999999998643 456678999999874
Q ss_pred CCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCC
Q 014172 209 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 288 (429)
Q Consensus 209 ~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~ 288 (429)
.|++++++++ +++|+|++++|+||++.+ .++++|+++|++| +++||+|++|....+.. ++ .
T Consensus 136 -------~d~~~l~~~i-~~tklV~ie~pt~~~~~~---~dl~~i~~la~~~-gi~vivD~a~a~~~~~~----p~-~-- 196 (389)
T PRK05968 136 -------RDEEAVAKAL-PGAKLLYLESPTSWVFEL---QDVAALAALAKRH-GVVTMIDNSWASPVFQR----PI-T-- 196 (389)
T ss_pred -------CCHHHHHHhc-ccCCEEEEECCCCCCCcH---HHHHHHHHHHHHc-CCEEEEECCCcchhccC----ch-h--
Confidence 2889999988 678999998777776655 4599999999999 99999999997654321 11 1
Q ss_pred CCCCceEEEeccChhccccc-ceeeEEEcCHHHHHHHHHHhh-cccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 014172 289 GMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQS-QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRE 366 (429)
Q Consensus 289 ~~~~~~i~~~S~SK~~~~~G-~R~G~v~~~~~~~~~l~~~~~-~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~ 366 (429)
.+..+++.|++|.++.+| .+.|++++++++++.++.... ....+.+.+.+..+...|+ .+..+.++..+
T Consensus 197 --~g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~-------tl~~r~~~~~~ 267 (389)
T PRK05968 197 --LGVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGAKLSPFEAWLLLRGLR-------TLPLRMKAHEA 267 (389)
T ss_pred --cCCcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCCCCCChHHHHHHHcccC-------cHHHHHHHHHH
Confidence 233588999999997544 578999999998888876543 2334556655555444443 24556666677
Q ss_pred HHHHHHHHhccCCCceee
Q 014172 367 RRDFLVKSFGELEGVKMS 384 (429)
Q Consensus 367 ~r~~l~~~L~~l~g~~~~ 384 (429)
+...+.+.|+++|+++.+
T Consensus 268 ~a~~la~~L~~~p~v~~v 285 (389)
T PRK05968 268 SALEIARRLKAHPVVERV 285 (389)
T ss_pred HHHHHHHHHHhCCCccEE
Confidence 788888999988887654
No 214
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.88 E-value=2.3e-20 Score=189.97 Aligned_cols=321 Identities=18% Similarity=0.162 Sum_probs=213.0
Q ss_pred HHHHHHHHHHhcCC--CeEEcCCCCCCCCChHHHHHHHHHHH-HcCCCCC---CCCCCCHHHHHHHHHHHHhhcCCCCCC
Q 014172 82 AITDQATALAQAGV--SVIRLAAGEPDFDTPVLIAEAGINAI-REGFTRY---TPNAGTLELRSAICHKLKEENGLSYTP 155 (429)
Q Consensus 82 ~~~~~~~~~~~~g~--~~i~L~~g~~~~~~p~~v~~a~~~~~-~~~~~~Y---~~~~G~~~lr~~ia~~l~~~~g~~~~~ 155 (429)
++.+..+++.+... ..--++.|.+++.+|+.+.+++.+.. ....+.| +..+|..+++..+++++.+.+|. +.
T Consensus 53 ~~~~~~~~l~~~n~~~~~~~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~--~~ 130 (481)
T PRK04366 53 EVVRHYTRLSQKNYGVDTGFYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGM--DA 130 (481)
T ss_pred HHHHHHHHHHhcCCCCCcceecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCC--Cc
Confidence 44444555544432 22448889899889999988888752 2345677 35678999999999999999995 33
Q ss_pred CcEEEecChHHHHHHH--HH-HhcCCCC----EEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccC
Q 014172 156 DQILVSNGAKQSILQA--VL-AVCSPGD----EVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEK 228 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~--l~-~l~~~gd----~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~ 228 (429)
..+..++|+++.+..+ ++ .++++|| +|++++|.|+.|...++..|++++.++++ .++.+|++.|+++++++
T Consensus 131 ~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~--~~~~~D~e~L~~~i~~~ 208 (481)
T PRK04366 131 VTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSN--EDGLVDLEALKAAVGED 208 (481)
T ss_pred eEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecC--CCCCcCHHHHHhhcccC
Confidence 4555566666655533 22 3457776 99999999999999999999999999985 34679999999999999
Q ss_pred CcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccc-
Q 014172 229 SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT- 307 (429)
Q Consensus 229 ~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~- 307 (429)
+++|++++|| |||.+ .+++++|+++|+++ +.++++|.++..... +. .+ ++..+..+++++.+|.++.|
T Consensus 209 t~~V~v~~Pn-~tG~~--~~dl~eI~~~a~~~-gal~iVD~a~~~~~~-g~--~~----~~~~GaD~~~~~~hK~l~~P~ 277 (481)
T PRK04366 209 TAALMLTNPN-TLGLF--ERNILEIAEIVHEA-GGLLYYDGANLNAIL-GK--AR----PGDMGFDVVHLNLHKTFSTPH 277 (481)
T ss_pred CeEEEEeCCC-Ccccc--chHHHHHHHHHHHc-CCEEEEEecChhhhc-cc--CC----ccccCCCEEEEechhhcCCCC
Confidence 9999999998 99965 34599999999999 999999999853211 11 11 12245679999999998744
Q ss_pred ---cceeeEEEcCHHHHHHHHHH------h-------------hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 014172 308 ---GWRLGYIAGPKHFVAACNKI------Q-------------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFR 365 (429)
Q Consensus 308 ---G~R~G~v~~~~~~~~~l~~~------~-------------~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~ 365 (429)
|..+|++.+.+++.+.+... . +......+.....++..++.. .+.+.+++..++..
T Consensus 278 g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~--~G~~Gl~~~a~~~~ 355 (481)
T PRK04366 278 GGGGPGSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRS--LGAEGLREVSEDAV 355 (481)
T ss_pred CCCCCCeeeeeehhhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHH--HHHHHHHHHHHHHH
Confidence 46688888887766654200 0 000001112222333333332 13556777777778
Q ss_pred HHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 366 ERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 366 ~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+.+++.++|+++..+.+..+.-.- ..++.+.. ...+ .+..++.++|.++ ||.+
T Consensus 356 ~~a~~l~~~L~~~~~~~~~~~~~~~-~~~~~~~~---~~~g----~~~~~v~~~L~~~-Gi~~ 409 (481)
T PRK04366 356 LNANYLKARLKDIYDLPYDRPCMHE-FVLSGKKL---KETG----VRTLDIAKRLLDY-GFHP 409 (481)
T ss_pred HHHHHHHHHhHhhCcccCCCCeeEE-EEEECccc---cccC----CCHHHHHHHHHHC-CccC
Confidence 8888999999886233321111111 22332210 0001 2678899998876 7653
No 215
>PRK07505 hypothetical protein; Provisional
Probab=99.88 E-value=3.4e-20 Score=185.49 Aligned_cols=298 Identities=14% Similarity=0.150 Sum_probs=183.9
Q ss_pred cCCCeEEcCCCC-CCCCChHHHHHHHHHHHHc-CCCCCCCC--CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 93 AGVSVIRLAAGE-PDFDTPVLIAEAGINAIRE-GFTRYTPN--AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 93 ~g~~~i~L~~g~-~~~~~p~~v~~a~~~~~~~-~~~~Y~~~--~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
.|+..+|+..+. ..+..+|++.+++.+.+.+ +...++.. ....+..+.+++.+.+..|. +.++.++ ++++.
T Consensus 44 ~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~----~~~~~~s-G~~a~ 118 (402)
T PRK07505 44 DGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA----SVLTFTS-CSAAH 118 (402)
T ss_pred CCceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC----CEEEECC-hHHHH
Confidence 577899997653 2334589999999998865 21122111 12244555555555555452 4444554 45566
Q ss_pred HHHHHHhc----CCCC-EEEEcCCCCCC-hH--HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCC
Q 014172 169 LQAVLAVC----SPGD-EVIIPAPFWVS-YP--EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNP 240 (429)
Q Consensus 169 ~~~l~~l~----~~gd-~Vlv~~p~y~~-~~--~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NP 240 (429)
..++..+. .+|+ .|++.+..|.+ .. ......+.+++.+|. .|++.++++++++++++++++|+||
T Consensus 119 ~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~~~~~~~vl~~p~~~ 191 (402)
T PRK07505 119 LGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICKTNKTVAYVADGVYS 191 (402)
T ss_pred HHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHhcCCCEEEEEecccc
Confidence 65665432 2233 35566654443 22 122224567777775 3899999998878899999999999
Q ss_pred ccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCC-ccccCCC-CCCceEEEeccChhcccccceeeEEE-cC
Q 014172 241 TGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT-SFASLPG-MWERTLTVNGFSKAFAMTGWRLGYIA-GP 317 (429)
Q Consensus 241 tG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~-~~~~~~~-~~~~~i~~~S~SK~~~~~G~R~G~v~-~~ 317 (429)
||.+++ +++|.++|++| ++++|+||+|+...|+..... ....+.. ..+++++++||||.++++| ||++ .+
T Consensus 192 ~G~~~~---~~~i~~l~~~~-~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---g~~~~~~ 264 (402)
T PRK07505 192 MGGIAP---VKELLRLQEKY-GLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG---GVIMLGD 264 (402)
T ss_pred cCCcCC---HHHHHHHHHHc-CCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---eEEEeCC
Confidence 999999 88899999999 999999999976555432211 1112222 3578899999999999776 8886 47
Q ss_pred HHHHHHHHHHhhcccC--CCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEe
Q 014172 318 KHFVAACNKIQSQFTS--GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFID 395 (429)
Q Consensus 318 ~~~~~~l~~~~~~~~~--~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~ 395 (429)
+++++.+......+++ +++.+++.++.++++.. .++++.+..+.++++.+.+...+... ....+.++.++.
T Consensus 265 ~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~g~~~~i~~~~ 337 (402)
T PRK07505 265 AEQIELILRYAGPLAFSQSLNVAALGAILASAEIH--LSEELDQLQQKLQNNIALFDSLIPTE-----QSGSFLPIRLIY 337 (402)
T ss_pred HHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHH--hccCcHHHHHHHHHHHHHHHHHHHhc-----CCCCCCCEEEEE
Confidence 8888888776554433 34556777777777620 13344555555666555443322111 011122222333
Q ss_pred cCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 396 FSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 396 l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++.. .+..+++++|+++ ||.+
T Consensus 338 ~~~~-----------~~~~~~~~~l~~~-Gi~v 358 (402)
T PRK07505 338 IGDE-----------DTAIKAAKQLLDR-GFYT 358 (402)
T ss_pred eCCH-----------HHHHHHHHHHHHC-CCeE
Confidence 3311 1367899999866 8876
No 216
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.88 E-value=3.4e-20 Score=184.24 Aligned_cols=290 Identities=18% Similarity=0.161 Sum_probs=197.8
Q ss_pred CCCeEEcCCCC-CCCCChHHHHHHHHHHHHcCCCCCC---CCCCC----HHHHHHHHHHHHhhcCCCCCCCcEEEecChH
Q 014172 94 GVSVIRLAAGE-PDFDTPVLIAEAGINAIREGFTRYT---PNAGT----LELRSAICHKLKEENGLSYTPDQILVSNGAK 165 (429)
Q Consensus 94 g~~~i~L~~g~-~~~~~p~~v~~a~~~~~~~~~~~Y~---~~~G~----~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~ 165 (429)
++++++|+.++ ..+..+|++.++..+++++.-.+-+ -..|. .+|.+++|+++ | .+.+++.+++-
T Consensus 101 ~r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~----g----~e~all~sSGy 172 (476)
T PLN02955 101 FKKLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLK----K----KEDCLVCPTGF 172 (476)
T ss_pred CceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHH----C----CCcEEEECChH
Confidence 45789999887 7788889999999998875211111 12455 44555555554 4 33455555555
Q ss_pred HHHHHHHHHh--------------cCCCCEEEEcCCCCCChHHHHHHc----CCEEEEecCCCCCCCCCCHHHHHhhccc
Q 014172 166 QSILQAVLAV--------------CSPGDEVIIPAPFWVSYPEMARIA----DATPVILPTRISENFLLDPKVLESKLTE 227 (429)
Q Consensus 166 ~al~~~l~~l--------------~~~gd~Vlv~~p~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~e~l~~~l~~ 227 (429)
.+...++.++ ..++|.|++..-.|.+....+++. +++++.++.+ |++.|++.++.
T Consensus 173 ~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HN-------D~~~Le~~L~~ 245 (476)
T PLN02955 173 AANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHC-------DMYHLNSLLSS 245 (476)
T ss_pred HHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCC-------CHHHHHHHHHh
Confidence 5555566665 245678888888999999999887 5777777742 88888888743
Q ss_pred ---CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhc
Q 014172 228 ---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF 304 (429)
Q Consensus 228 ---~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 304 (429)
+.++|++....++.|.+.+ +++|.++|++| |.++|+||+|+.++++.........+....+.+|+++||||.+
T Consensus 246 ~~~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~-ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~ 321 (476)
T PLN02955 246 CKMKRKVVVTDSLFSMDGDFAP---MEELSQLRKKY-GFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAA 321 (476)
T ss_pred CCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHc-CcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccch
Confidence 3456666767899999999 99999999999 9999999999988887543333333333357889999999999
Q ss_pred ccccceeeEEEcCHHHHHHHHHHhhcccCCC--chHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCce
Q 014172 305 AMTGWRLGYIAGPKHFVAACNKIQSQFTSGA--SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK 382 (429)
Q Consensus 305 ~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~--~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~ 382 (429)
|..| ||+++++++++.+......+.++. +.....++.++++. ... -...+++++++.+++.+. + |+.
T Consensus 322 G~~G---Gfi~gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l---~~~-~~~~r~~L~~n~~~fr~~---~-G~~ 390 (476)
T PLN02955 322 GCHG---GFIACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVV---ARK-EKWRRKAIWERVKEFKAL---S-GVD 390 (476)
T ss_pred hccC---ceeecHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHH---Hhc-CHHHHHHHHHHHHHHHHh---c-CCC
Confidence 8777 999999999998887655443332 33344445555554 111 124567777777777774 2 554
Q ss_pred eecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 383 MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 383 ~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
+ .+.+ +.+.+... ....+++++|+++ ||.|+
T Consensus 391 ~---~sPI-~pI~ig~~-----------~~a~~~~~~L~~~-Gi~v~ 421 (476)
T PLN02955 391 I---SSPI-ISLVVGNQ-----------EKALKASRYLLKS-GFHVM 421 (476)
T ss_pred C---CCCE-EEEEeCCH-----------HHHHHHHHHHHHC-CCEEE
Confidence 3 1222 34444432 2467889998877 88764
No 217
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.88 E-value=3.6e-20 Score=184.70 Aligned_cols=300 Identities=14% Similarity=0.160 Sum_probs=201.7
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.+||+..|. ..++. +|++.+++.+++++.. ..+. ....+....+++.+.+..+ .+.+++++++++++.
T Consensus 33 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~-~~~~-~~~~~~~~~la~~L~~~~~----~~~~~f~~SGseA~e 106 (397)
T TIGR03246 33 QGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLW-HIGN-GYTNEPVLRLAKKLVDATF----ADKVFFCNSGAEANE 106 (397)
T ss_pred CCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcc-cccC-ccCCHHHHHHHHHHHhhCC----CCEEEEeCCcHHHHH
Confidence 578899998873 34444 8999999999887521 1111 1123445566666665433 368999999999999
Q ss_pred HHHHHhc-------CCC-CEEEEcCCCCCChH-HHHHHcCCE------------EEEecCCCCCCCCCCHHHHHhhcccC
Q 014172 170 QAVLAVC-------SPG-DEVIIPAPFWVSYP-EMARIADAT------------PVILPTRISENFLLDPKVLESKLTEK 228 (429)
Q Consensus 170 ~~l~~l~-------~~g-d~Vlv~~p~y~~~~-~~~~~~g~~------------~~~v~~~~~~~~~~d~e~l~~~l~~~ 228 (429)
.+++... .+| +.|+..+-+|.+.. ......+.. +..++. .|++.+++.+.++
T Consensus 107 ~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~ 179 (397)
T TIGR03246 107 AALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY-------NDLAAAKALISDK 179 (397)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-------CCHHHHHHHhccC
Confidence 9998762 123 56777777676654 333433321 222221 2899999999888
Q ss_pred CcEEEEcCCCCCccCCC-CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccc
Q 014172 229 SRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 307 (429)
Q Consensus 229 ~~~i~l~~p~NPtG~~~-~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 307 (429)
+++|++..++++.|... +.+.+++|.++|++| |+++|.||+|.++.+.|... ....+ +...-+.+|||.++ .
T Consensus 180 ~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEv~tG~Gr~G~~~-a~~~~----gv~pDi~t~~K~lg-g 252 (397)
T TIGR03246 180 TCAVIVEPIQGEGGVVPADPAFLKGLRELCDRH-NALLIFDEVQTGVGRTGELY-AYMHY----GVTPDILTSAKALG-G 252 (397)
T ss_pred eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhcCCccccch-hhhhc----CCCCCEEEeehhhh-C
Confidence 88888886666677554 789999999999999 99999999998774444321 11111 11122448999998 8
Q ss_pred cceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC---C-cee
Q 014172 308 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE---G-VKM 383 (429)
Q Consensus 308 G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~---g-~~~ 383 (429)
|+++||+++++++++.+.......+++.+++++.++.++|+. .+ -.++.+.++++.+++.+.|+++. + +..
T Consensus 253 G~pigav~~~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~---~~--~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~ 327 (397)
T TIGR03246 253 GFPIGAMLTTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDL---VN--TPELLAGVKQRHDLFVDGLEKINARYNVFSE 327 (397)
T ss_pred CcceeEEEEcHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHH---Hh--hccHHHHHHHHHHHHHHHHHHHHhcCCCeEe
Confidence 999999999999988886544445566788889888888875 12 23567888888899998888752 1 233
Q ss_pred ecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 384 SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 384 ~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+++.|.+ +.+.+..... ....++++.|+++ ||.+
T Consensus 328 vrg~G~~-~~i~~~~~~~---------~~~~~~~~~l~~~-Gv~~ 361 (397)
T TIGR03246 328 IRGKGLL-IGAVLTEAYQ---------GKAKQFVNAAAEE-GVIA 361 (397)
T ss_pred eecCceE-EEEEEcCchh---------hHHHHHHHHHHHC-CeEE
Confidence 3445544 4444432100 1467899988877 7764
No 218
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.88 E-value=6.2e-20 Score=177.02 Aligned_cols=272 Identities=21% Similarity=0.331 Sum_probs=193.7
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCEEEEcCCC
Q 014172 110 PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPF 188 (429)
Q Consensus 110 p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l-~~~gd~Vlv~~p~ 188 (429)
-.+.++++.+.+.+++...++ -..+|.+++++|+ ....++.++++|.++.++++++ ++|||+|+++..+
T Consensus 14 ~~~e~~~v~~vl~sg~i~~G~--~v~~FE~~~ae~~--------G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~T 83 (374)
T COG0399 14 GEEELAAVQEVLKSGWLTGGP--FVRRFEQAFAEYL--------GVKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFT 83 (374)
T ss_pred chHHHHHHHHHHHcCCeecCh--HHHHHHHHHHHHh--------CCCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCc
Confidence 367788888999887766644 4589999999996 4567899999999999999966 6999999999999
Q ss_pred CCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEc
Q 014172 189 WVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 268 (429)
Q Consensus 189 y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~D 268 (429)
|......+...|+++++++++++ .+.+|++.|+++|++++|+|+ |-+--|...+ +++|.++|++| |++||+|
T Consensus 84 fvATan~i~~~Ga~PVFvDid~~-T~nid~~~ie~aIt~~tKAIi---pVhl~G~~~d---m~~i~~la~~~-~l~vIED 155 (374)
T COG0399 84 FVATANAVLLVGAKPVFVDIDPD-TLNIDPDLIEAAITPRTKAII---PVHLAGQPCD---MDAIMALAKRH-GLPVIED 155 (374)
T ss_pred hHHHHHHHHHcCCeEEEEecCCc-ccCCCHHHHHHHcccCCeEEE---EehhccCCCC---HHHHHHHHHHc-CCeEEEE
Confidence 99999999999999999999874 578999999999999999999 4445788888 99999999999 9999999
Q ss_pred cCCcccc-cCCCCCCccccCCCCCCceEEEecc--ChhcccccceeeEEEcC-HHHHHHHHHHhhccc------------
Q 014172 269 EIYEHII-YAPATHTSFASLPGMWERTLTVNGF--SKAFAMTGWRLGYIAGP-KHFVAACNKIQSQFT------------ 332 (429)
Q Consensus 269 eay~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~--SK~~~~~G~R~G~v~~~-~~~~~~l~~~~~~~~------------ 332 (429)
.+++... |.|....++.. +.+.|| .|.+. +| -.|.++++ +++.+.++.++....
T Consensus 156 aAqa~Ga~y~gk~vGt~Gd--------~~~fSF~~~K~it-tg-EGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~ 225 (374)
T COG0399 156 AAQAHGATYKGKKVGSFGD--------IGAFSFHATKNLT-TG-EGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEE 225 (374)
T ss_pred cchhccCeecCcccccccc--------eEEEEecCCCCcc-cc-CceEEEeCCHHHHHHHHHHHHhCcCCCccccceeee
Confidence 9998644 55544333322 557777 58887 55 56888775 567777665543221
Q ss_pred ----CCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC-Cc---eEEEE-EecCCccCCc
Q 014172 333 ----SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP-QG---AFYLF-IDFSTYYGSE 403 (429)
Q Consensus 333 ----~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p-~~---~~~~~-~~l~~~~~~~ 403 (429)
+..+.+..+.....| +.+++..++-++..+.+.+.|++++++.+... .+ +++++ +.++.. +
T Consensus 226 ~G~N~rm~~iqAAigl~QL-------~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~-~-- 295 (374)
T COG0399 226 LGYNYRLTEIQAAIGLAQL-------ERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEE-G-- 295 (374)
T ss_pred cccccCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCC-C--
Confidence 112233223233333 33555555556666777778887766554322 22 23222 344321 1
Q ss_pred ccCCCCCCChHHHHHHHHHhCCee
Q 014172 404 AEGFGKIENSESLCRYLLDKAQVL 427 (429)
Q Consensus 404 ~~~~~~~~~~~~~~~~Ll~~~gV~ 427 (429)
.+.+++.+.|.++ ||.
T Consensus 296 -------~~R~~l~~~L~~~-gi~ 311 (374)
T COG0399 296 -------ISRDALMESLKEA-GVG 311 (374)
T ss_pred -------CCHHHHHHHHHhC-CCC
Confidence 2456777776655 664
No 219
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.88 E-value=2.1e-19 Score=180.53 Aligned_cols=202 Identities=15% Similarity=0.181 Sum_probs=148.6
Q ss_pred eEEcCCCCCCCCC-----hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHH
Q 014172 97 VIRLAAGEPDFDT-----PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 171 (429)
Q Consensus 97 ~i~L~~g~~~~~~-----p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~ 171 (429)
+..|+.|.|+.+. +.+-.+++.+.+..+...+++ ...+|+++++++++ .+++++++|+++++..+
T Consensus 25 ~~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~~~~~G~--~~~~fe~~lA~~~g--------~~~~v~~~sGt~al~~a 94 (438)
T PRK15407 25 PKPFVPGKSPIPPSGKVIDAKELQNLVDASLDFWLTTGR--FNDAFEKKLAEFLG--------VRYALLVNSGSSANLLA 94 (438)
T ss_pred cccccCCCCCCCcCccCCCHHHHHHHHHHHHhCcccCCh--hHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHH
Confidence 3447888886654 233344455555544443433 24789999999873 34689999999999998
Q ss_pred HHHh---------cCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCcc
Q 014172 172 VLAV---------CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTG 242 (429)
Q Consensus 172 l~~l---------~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG 242 (429)
+.++ +++||+|+++.|+|..+...+...|++++.+++++ .++.+|++.+++.+++++++|+++++ +|
T Consensus 95 L~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~-~~~~id~~~le~~i~~~tkaVi~~~~---~G 170 (438)
T PRK15407 95 FSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVEL-PTYNIDASLLEAAVSPKTKAIMIAHT---LG 170 (438)
T ss_pred HHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHHcCcCCeEEEEeCC---CC
Confidence 8876 47899999999999999999999999999999875 35779999999999999999998764 56
Q ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEccCCcccc-cCCCCCCccccCCCCCCceEEEeccC--hhcccccceeeEEEcCH-
Q 014172 243 SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII-YAPATHTSFASLPGMWERTLTVNGFS--KAFAMTGWRLGYIAGPK- 318 (429)
Q Consensus 243 ~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~~~~G~R~G~v~~~~- 318 (429)
...+ +++|.++|++| |++||+|++|+... |.|.... .+. .+.+.||+ |.+. .|- .|++++++
T Consensus 171 ~p~d---l~~I~~la~~~-gi~vIeDaa~a~G~~~~g~~~G---~~g-----d~~~fSf~~~k~~~-~ge-GG~l~t~d~ 236 (438)
T PRK15407 171 NPFD---LAAVKAFCDKH-NLWLIEDNCDALGSTYDGRMTG---TFG-----DIATLSFYPAHHIT-MGE-GGAVFTNDP 236 (438)
T ss_pred Chhh---HHHHHHHHHHC-CCEEEEECccchhhhcCCeeee---ccC-----ceEEEeCCCCCCcc-ccC-ceEEEECCH
Confidence 6555 89999999999 99999999998643 3332222 221 25677775 6664 343 58988865
Q ss_pred HHHHHHHH
Q 014172 319 HFVAACNK 326 (429)
Q Consensus 319 ~~~~~l~~ 326 (429)
++.+.++.
T Consensus 237 ~l~~~~~~ 244 (438)
T PRK15407 237 LLKKIIES 244 (438)
T ss_pred HHHHHHHH
Confidence 45444443
No 220
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.88 E-value=1.4e-20 Score=188.32 Aligned_cols=216 Identities=18% Similarity=0.226 Sum_probs=159.9
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChH----HHHHHcCCEEEEec
Q 014172 132 AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVILP 207 (429)
Q Consensus 132 ~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~ 207 (429)
+....|.+.+|++. | .+..++++|+++++..++..++++||+|+++.+.|.+.. ..++..|++++.++
T Consensus 64 p~~~~Le~~lA~le----g----~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd 135 (431)
T PRK08248 64 PTTDVFEKRIAALE----G----GIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVD 135 (431)
T ss_pred chHHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEEC
Confidence 33466777777775 2 357889999999999999999999999999999987633 45667899999998
Q ss_pred CCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccC
Q 014172 208 TRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL 287 (429)
Q Consensus 208 ~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~ 287 (429)
. .|++.+++++++++++|++++|+||||.+++ +++|+++|+++ ++++|+|++|.. +....++
T Consensus 136 ~-------~d~e~l~~ai~~~tklV~l~sp~NPtG~v~d---i~~I~~la~~~-gi~vIvD~t~a~----~~~~~pl--- 197 (431)
T PRK08248 136 P-------SDPENFEAAITDKTKALFAETIGNPKGDVLD---IEAVAAIAHEH-GIPLIVDNTFAS----PYLLRPI--- 197 (431)
T ss_pred C-------CCHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHc-CCEEEEeCCCCc----cccCChh---
Confidence 5 2899999999999999999999999999999 88999999999 999999999863 1111111
Q ss_pred CCCCCceEEEeccChhcccccceeeEEEcC-HHH---------------------------------HHHHHHHhhcccC
Q 014172 288 PGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHF---------------------------------VAACNKIQSQFTS 333 (429)
Q Consensus 288 ~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~-~~~---------------------------------~~~l~~~~~~~~~ 333 (429)
.++.++++.|++|.+|.+|.++|++++. .+. ...........+.
T Consensus 198 --~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 275 (431)
T PRK08248 198 --EHGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGA 275 (431)
T ss_pred --HcCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCC
Confidence 2467799999999999999999998763 211 0111112222333
Q ss_pred CCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCce
Q 014172 334 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK 382 (429)
Q Consensus 334 ~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~ 382 (429)
..+++....+..- -+-+..+.++..++...+.+.|++.|+++
T Consensus 276 ~l~p~~a~l~~rg-------l~tl~~R~~~~~~nA~~la~~L~~~p~v~ 317 (431)
T PRK08248 276 ALSPFNSFLLLQG-------LETLHLRMERHSENALAVAKFLEEHEAVE 317 (431)
T ss_pred CCCHHHHHHHhcC-------cCcHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 3444433322222 23356677777888888999999887764
No 221
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.87 E-value=4.4e-20 Score=181.99 Aligned_cols=212 Identities=11% Similarity=0.133 Sum_probs=162.3
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH----HHHcCCEEEEecCCC
Q 014172 135 LELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADATPVILPTRI 210 (429)
Q Consensus 135 ~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~v~~~~ 210 (429)
..|++.+|++.. .+++++++|+++++..++.+++++||+|++++|.|.+.... .+..|+++..++..
T Consensus 53 ~~lE~~lA~l~g--------~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~- 123 (377)
T TIGR01324 53 FALQDAMCELEG--------GAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPL- 123 (377)
T ss_pred HHHHHHHHHHhC--------CCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCC-
Confidence 588888888752 35899999999999999999999999999999999876543 35678888777531
Q ss_pred CCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCC
Q 014172 211 SENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM 290 (429)
Q Consensus 211 ~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~ 290 (429)
+.+.+++++++++|+|++++|+||+|.+.+ +++|+++|++| |+++|+|++|+..... .++ .
T Consensus 124 ------~~e~l~~~i~~~tklV~lesp~Np~g~~~d---l~~I~~la~~~-g~~livD~t~a~g~~~----~pl-----~ 184 (377)
T TIGR01324 124 ------IGEDIATLIQPNTKVLFLEAPSSITFEIQD---IPAIAKAARNP-GIVIMIDNTWAAGLLF----KPL-----E 184 (377)
T ss_pred ------CHHHHHHhcCCCceEEEEECCCCCCCcHHH---HHHHHHHHHHc-CCEEEEECCCcccccc----Ccc-----c
Confidence 237899999999999999999999998887 99999999999 9999999999863221 111 2
Q ss_pred CCceEEEeccChhccc-ccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Q 014172 291 WERTLTVNGFSKAFAM-TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRD 369 (429)
Q Consensus 291 ~~~~i~~~S~SK~~~~-~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~ 369 (429)
.+..+++.|++|.++- ++...|+++++++.++.+.......+.+.++.....+...+ +.+..+.++.+++..
T Consensus 185 ~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl-------~tl~~R~~~~~~~a~ 257 (377)
T TIGR01324 185 HGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDADDAYTTLRGL-------RTLGVRLKQHQESSL 257 (377)
T ss_pred cCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHHHHHHHHhhh-------hhHHHHHHHHHHHHH
Confidence 4566999999999963 34678999999888877775555555555665444443333 335555667777777
Q ss_pred HHHHHhccCCCc
Q 014172 370 FLVKSFGELEGV 381 (429)
Q Consensus 370 ~l~~~L~~l~g~ 381 (429)
.+.+.|++.|.+
T Consensus 258 ~la~~L~~~p~v 269 (377)
T TIGR01324 258 AIAKWLSEQPEV 269 (377)
T ss_pred HHHHHHHhCCCc
Confidence 788888876654
No 222
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.87 E-value=2.7e-20 Score=183.22 Aligned_cols=220 Identities=11% Similarity=0.143 Sum_probs=162.5
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH----HHHHcCCEEEEec
Q 014172 132 AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVILP 207 (429)
Q Consensus 132 ~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~ 207 (429)
.+....++++++.+....+ .+.. ++++++++++..++.+++++||+|++++|.|.++.. .++..|+++..++
T Consensus 60 R~gnPt~~~Le~~la~le~---~~~~-v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd 135 (395)
T PRK05967 60 TRGTPTTDALCKAIDALEG---SAGT-ILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYD 135 (395)
T ss_pred CCCChHHHHHHHHHHHHhC---CCCE-EEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeC
Confidence 4445566666666654443 3344 555557899999999999999999999999999874 4577899998886
Q ss_pred CCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccC
Q 014172 208 TRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL 287 (429)
Q Consensus 208 ~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~ 287 (429)
.. +.+.+++++++++|+|++++|+||+|.+.+ +++|+++|+++ |+++|+|++|....+- ..+
T Consensus 136 ~~-------~~e~l~~al~~~TklV~lesPsNP~l~v~d---l~~I~~la~~~-g~~vvVD~t~a~p~~~-------~pl 197 (395)
T PRK05967 136 PE-------IGAGIAKLMRPNTKVVHTEAPGSNTFEMQD---IPAIAEAAHRH-GAIVMMDNTWATPLYF-------RPL 197 (395)
T ss_pred CC-------CHHHHHHhcCcCceEEEEECCCCCCCcHHH---HHHHHHHHHHh-CCEEEEECCccCceec-------Chh
Confidence 42 457899999999999999999999887666 99999999999 9999999999753211 111
Q ss_pred CCCCCceEEEeccChhcc-cccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 014172 288 PGMWERTLTVNGFSKAFA-MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRE 366 (429)
Q Consensus 288 ~~~~~~~i~~~S~SK~~~-~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~ 366 (429)
..+..|++.|.+|.++ -.+.-.|+++.++++.+.+.......+.+.++.....+..- .+-+.-+.++..+
T Consensus 198 --~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~~~~G~~~~p~da~l~~rg-------l~Tl~lR~~~~~~ 268 (395)
T PRK05967 198 --DFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAHGTLGLCAGPDDTYQILRG-------LRTMGIRLEHHRK 268 (395)
T ss_pred --HcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHHHHHcCCCCCHHHHHHHHcC-------cccHHHHHHHHHH
Confidence 1456699999999974 23467888888887777776555555656666654333322 3345666677777
Q ss_pred HHHHHHHHhccCCCce
Q 014172 367 RRDFLVKSFGELEGVK 382 (429)
Q Consensus 367 ~r~~l~~~L~~l~g~~ 382 (429)
+...+.+.|++.|.++
T Consensus 269 na~~lA~~L~~hp~v~ 284 (395)
T PRK05967 269 SALEIARWLEGRPDVA 284 (395)
T ss_pred HHHHHHHHHHhCCCCc
Confidence 8888888888877653
No 223
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.87 E-value=2.8e-20 Score=186.09 Aligned_cols=216 Identities=14% Similarity=0.162 Sum_probs=156.2
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHH----cCCEEEEec
Q 014172 132 AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI----ADATPVILP 207 (429)
Q Consensus 132 ~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~v~ 207 (429)
+...+|++.+|++. | .+..++++++++++..++.+++++||+|+++.+.|.+....+.. .|+++..++
T Consensus 58 pt~~~Le~~lA~l~----g----~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d 129 (425)
T PRK06084 58 PTNDVLEQRVAALE----G----GVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAA 129 (425)
T ss_pred chHHHHHHHHHHHh----C----CCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEEC
Confidence 34567888888775 2 23567788888999999999999999999999999865544432 566776665
Q ss_pred CCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccC
Q 014172 208 TRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL 287 (429)
Q Consensus 208 ~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~ 287 (429)
. .|++.+++++++++++|++++|+||||.+++ +++|.++|++| +++||+|++|+.... ..++ .
T Consensus 130 ~-------~d~e~le~ai~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~-~i~vVvD~a~a~~~~----~~p~-~- 192 (425)
T PRK06084 130 H-------DDIAALEALIDERTKAVFCESIGNPAGNIID---IQALADAAHRH-GVPLIVDNTVATPVL----CRPF-E- 192 (425)
T ss_pred C-------CCHHHHHHHhccCCcEEEEeCCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCCccccc----CChh-h-
Confidence 3 3899999999999999999999999999999 89999999999 999999999984321 1111 1
Q ss_pred CCCCCceEEEeccChhcccccceeeEEEcC-HHH--HH----------------------------HH----HHHhhccc
Q 014172 288 PGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHF--VA----------------------------AC----NKIQSQFT 332 (429)
Q Consensus 288 ~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~-~~~--~~----------------------------~l----~~~~~~~~ 332 (429)
.+..+++.|++|.++.+|.++|.+++. ..+ .+ .. .......+
T Consensus 193 ---~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g 269 (425)
T PRK06084 193 ---HGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMG 269 (425)
T ss_pred ---cCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcC
Confidence 345599999999999899999987763 211 00 00 01122234
Q ss_pred CCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCce
Q 014172 333 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK 382 (429)
Q Consensus 333 ~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~ 382 (429)
...+.+....+..-| +-+..+.++..++...+.+.|++.|++.
T Consensus 270 ~~l~~~~a~l~lrgl-------~tl~~R~~~~~~na~~la~~L~~~p~v~ 312 (425)
T PRK06084 270 AALSPFNAFLILQGL-------ETLALRMERHTENALKVARYLQQHPQVA 312 (425)
T ss_pred CCCCHHHHHHHHcCc-------CcHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 445555433333332 3366677777888888999999887754
No 224
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.87 E-value=2.7e-20 Score=177.92 Aligned_cols=284 Identities=20% Similarity=0.178 Sum_probs=206.7
Q ss_pred CChHHHHHHHHHHHHcCCC------CCCCC--CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh--c-
Q 014172 108 DTPVLIAEAGINAIREGFT------RYTPN--AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV--C- 176 (429)
Q Consensus 108 ~~p~~v~~a~~~~~~~~~~------~Y~~~--~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l--~- 176 (429)
++.+++++++...+...+. .|+-. ....+-|+.||+.++ .++++|++|+|+||+.++++... .
T Consensus 12 p~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llg------a~~~eIiFTSG~TEsnNlaI~g~~~a~ 85 (386)
T COG1104 12 PVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLG------ADPEEIIFTSGATESNNLAIKGAALAY 85 (386)
T ss_pred CCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhC------CCCCeEEEecCCcHHHHHHHHhhHHhh
Confidence 3458899999988765321 12100 123466777777764 57899999999999999999873 2
Q ss_pred ---CCCCEEEEcCCCCCChHHHHHHc---CCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHH
Q 014172 177 ---SPGDEVIIPAPFWVSYPEMARIA---DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLL 250 (429)
Q Consensus 177 ---~~gd~Vlv~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l 250 (429)
+.|..|+++.--|+...+.++.+ |.++.++|++. ++.+|+++|+++++++|.+|.|...||.||++.| +
T Consensus 86 ~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~--~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQp---I 160 (386)
T COG1104 86 RNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDS--NGLVDLEQLEEALRPDTILVSIMHANNETGTIQP---I 160 (386)
T ss_pred hcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCC--CCeEcHHHHHHhcCCCceEEEEEecccCeeeccc---H
Confidence 24789999999999988887776 99999999975 4569999999999999999999999999999999 9
Q ss_pred HHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHH--HHH---
Q 014172 251 DEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVA--ACN--- 325 (429)
Q Consensus 251 ~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~--~l~--- 325 (429)
++|.++|+++ ++++++|.++.. |..+..+..+ ..++...|-+|.+|..| +|.++..+.+.- .+.
T Consensus 161 ~ei~~i~k~~-~i~fHvDAvQa~----Gkipi~~~~~----~vD~ls~SaHK~~GpkG--iGaLyv~~~~~~~p~i~GGg 229 (386)
T COG1104 161 AEIGEICKER-GILFHVDAVQAV----GKIPIDLEEL----GVDLLSFSAHKFGGPKG--IGALYVRPGVRLEPLIHGGG 229 (386)
T ss_pred HHHHHHHHHc-CCeEEEehhhhc----Cceecccccc----CcceEEeehhhccCCCc--eEEEEECCCCccCceeccCc
Confidence 9999999999 899999999886 4444444332 23466777789999888 788876543211 111
Q ss_pred HHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC-CCceeecC---CceEEEEEecCCccC
Q 014172 326 KIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL-EGVKMSEP---QGAFYLFIDFSTYYG 401 (429)
Q Consensus 326 ~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l-~g~~~~~p---~~~~~~~~~l~~~~~ 401 (429)
+.........+.++..+...+++. ..+.++....+++..|+.+.+.|.+. |++.+... .-...+.+.+|+.
T Consensus 230 QE~g~RsGTenv~~Ivg~~~A~~~---a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv-- 304 (386)
T COG1104 230 QERGLRSGTENVPGIVGFGKAAEI---AVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGV-- 304 (386)
T ss_pred CCCCCCCCCccHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCC--
Confidence 111111223455555666666665 45667888889999999999999975 77776533 2344566777753
Q ss_pred CcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 402 SEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
..+.+... ++..||++|
T Consensus 305 ----------~gE~ll~~-L~~~gI~vS 321 (386)
T COG1104 305 ----------EGESLLLA-LDLAGIAVS 321 (386)
T ss_pred ----------cHHHHHHh-ccccCeEEe
Confidence 45555554 566799886
No 225
>PLN02509 cystathionine beta-lyase
Probab=99.87 E-value=5.7e-20 Score=184.44 Aligned_cols=224 Identities=14% Similarity=0.168 Sum_probs=163.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChH----HHHHHcC
Q 014172 125 FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIAD 200 (429)
Q Consensus 125 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g 200 (429)
.+.|+.. |.+ .++++++++++..| .+++++++|+++++.+++ .++++||+|+++.|.|..+. ..+...|
T Consensus 124 ~~~Y~r~-gnp-t~~aLE~~lA~leg----~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G 196 (464)
T PLN02509 124 PYDYTRS-GNP-TRDALESLLAKLDK----ADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSG 196 (464)
T ss_pred CCccCCC-CCH-HHHHHHHHHHHHhC----CCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCC
Confidence 3567654 654 67888888877654 456777788888887555 67899999999999999876 3455789
Q ss_pred CEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCC
Q 014172 201 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 280 (429)
Q Consensus 201 ~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~ 280 (429)
++++.++. .|++++++++++++|+|++++|+||||.+.+ +++|+++|++| |+++|+|++|......
T Consensus 197 ~~v~~vd~-------~d~e~l~~ai~~~TklV~lesPsNPtG~i~D---l~~I~~lAk~~-g~~lIVD~A~a~~~~~--- 262 (464)
T PLN02509 197 VVVKRVNT-------TNLDEVAAAIGPQTKLVWLESPTNPRQQISD---IRKIAEMAHAQ-GALVLVDNSIMSPVLS--- 262 (464)
T ss_pred eEEEEeCC-------CCHHHHHHhCCcCCeEEEEECCCCCCCCHHH---HHHHHHHHHHc-CCEEEEECCccccccC---
Confidence 99988864 3789999999999999999999999999866 99999999999 9999999998753321
Q ss_pred CCccccCCCCCCceEEEeccChhccccc-ceeeEEEc-CHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHH
Q 014172 281 HTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 358 (429)
Q Consensus 281 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~R~G~v~~-~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~ 358 (429)
.++ ..+.++++.|++|.++-+| .=.|++++ ++.+.+.+.........+.+.+....+...| +.+.
T Consensus 263 -~pl-----~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l~lr~L-------~tL~ 329 (464)
T PLN02509 263 -RPL-----ELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGI-------KTMA 329 (464)
T ss_pred -Chh-----hcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHHHHhhh-------hhHH
Confidence 111 1244599999999986333 23577776 4445555554443333334554433333333 3466
Q ss_pred HHHHHHHHHHHHHHHHhccCCCce
Q 014172 359 KMVKAFRERRDFLVKSFGELEGVK 382 (429)
Q Consensus 359 ~~~~~~~~~r~~l~~~L~~l~g~~ 382 (429)
.+.++.+++...+.+.|++.|.++
T Consensus 330 ~R~~r~~~nA~~la~~L~~~p~V~ 353 (464)
T PLN02509 330 LRIEKQQENARKIAMYLSSHPRVK 353 (464)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcc
Confidence 777888888999999999887764
No 226
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.87 E-value=6.5e-20 Score=181.11 Aligned_cols=217 Identities=12% Similarity=0.149 Sum_probs=157.3
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCC-hHH---HHHHcCCEEEEe
Q 014172 131 NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS-YPE---MARIADATPVIL 206 (429)
Q Consensus 131 ~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~-~~~---~~~~~g~~~~~v 206 (429)
++...+|++.++++.+ ....+++++| +.++..++ .++++||+|+++.|+|.+ |.. .+...|++++.+
T Consensus 49 ~p~~~~Le~~lA~l~g-------~~~~~~~~sG-~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v 119 (377)
T PRK07671 49 NPTRAALEELIAVLEG-------GHAGFAFGSG-MAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFV 119 (377)
T ss_pred ChHHHHHHHHHHHHhC-------CCceEEeCCH-HHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEE
Confidence 3345678888877753 2234555554 56777554 578999999999999984 432 344579999988
Q ss_pred cCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCcccc
Q 014172 207 PTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS 286 (429)
Q Consensus 207 ~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~ 286 (429)
+. .|++.+++++++++++|++++|+||||.+.+ +++|.++|+++ ++++|+|++|....+. . ++ .
T Consensus 120 ~~-------~d~~~l~~ai~~~tklV~le~P~NPtg~~~d---l~~I~~la~~~-g~~lvvD~a~~~~~~~--~--p~-~ 183 (377)
T PRK07671 120 DT-------SNLEEVEEAIRPNTKAIYVETPTNPLLKITD---IKKISTIAKEK-GLLTIVDNTFMTPYWQ--S--PI-S 183 (377)
T ss_pred CC-------CCHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHc-CCEEEEECCCCccccC--C--hh-h
Confidence 74 3899999999999999999999999999988 89999999999 9999999999753322 1 11 1
Q ss_pred CCCCCCceEEEeccChhccccc-ceeeEEEc-CHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 014172 287 LPGMWERTLTVNGFSKAFAMTG-WRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 364 (429)
Q Consensus 287 ~~~~~~~~i~~~S~SK~~~~~G-~R~G~v~~-~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~ 364 (429)
.+..+++.|+||.++-++ .-.|++++ ++++++.+...+.......+......+... .+.+..+.++.
T Consensus 184 ----~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~~-------l~tl~~R~~~~ 252 (377)
T PRK07671 184 ----LGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLLRG-------LKTLGIRMEEH 252 (377)
T ss_pred ----hCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHHcC-------cChHHHHHHHH
Confidence 244699999999997333 34566665 567888888776665555555544333322 23356677777
Q ss_pred HHHHHHHHHHhccCCCcee
Q 014172 365 RERRDFLVKSFGELEGVKM 383 (429)
Q Consensus 365 ~~~r~~l~~~L~~l~g~~~ 383 (429)
.++...+.+.|++.|++..
T Consensus 253 ~~na~~la~~L~~~~~v~~ 271 (377)
T PRK07671 253 ETNSRAIAEFLNNHPAVNK 271 (377)
T ss_pred HHHHHHHHHHHHcCCCeeE
Confidence 8888999999998777543
No 227
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.87 E-value=3.7e-20 Score=184.16 Aligned_cols=217 Identities=13% Similarity=0.184 Sum_probs=164.1
Q ss_pred CCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH----HHHcCCEEEEecC
Q 014172 133 GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADATPVILPT 208 (429)
Q Consensus 133 G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~v~~ 208 (429)
....|++.++++.+ ...++++++++.|+.+++.+++++||+|+++.++|.+.... +...|+++++++.
T Consensus 62 tv~~lE~~la~leg--------~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~ 133 (432)
T PRK06702 62 TLAAFEQKLAELEG--------GVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP 133 (432)
T ss_pred HHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence 45677788887752 34578899999999999999999999999999999876665 6778999999964
Q ss_pred CCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCC
Q 014172 209 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 288 (429)
Q Consensus 209 ~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~ 288 (429)
.+|++.++++++++||+|++.+|+||++.+.+ +++|+++|++| |+++|+|++|.- +.+.. +
T Consensus 134 ------~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~-gi~livD~T~~t--------P~~~~-p 194 (432)
T PRK06702 134 ------NLTADEIVALANDKTKLVYAESLGNPAMNVLN---FKEFSDAAKEL-EVPFIVDNTLAT--------PYLCQ-A 194 (432)
T ss_pred ------CCCHHHHHHhCCcCCeEEEEEcCCCccccccC---HHHHHHHHHHc-CCEEEEECCCCc--------hhhCC-h
Confidence 26899999999999999999999999999999 99999999999 999999999852 11111 1
Q ss_pred CCCCceEEEeccCh-----hccccccee-----eEEEcC-HHHH---------------------HHHH-HHhhcccCCC
Q 014172 289 GMWERTLTVNGFSK-----AFAMTGWRL-----GYIAGP-KHFV---------------------AACN-KIQSQFTSGA 335 (429)
Q Consensus 289 ~~~~~~i~~~S~SK-----~~~~~G~R~-----G~v~~~-~~~~---------------------~~l~-~~~~~~~~~~ 335 (429)
-..+-.|++.|+|| ..+++|.++ +|...+ .+++ .... .....++.+.
T Consensus 195 l~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 274 (432)
T PRK06702 195 FEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCM 274 (432)
T ss_pred hhcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCC
Confidence 11355599999999 667777776 555432 1111 1111 2233445677
Q ss_pred chHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCcee
Q 014172 336 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM 383 (429)
Q Consensus 336 ~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~ 383 (429)
+.+....+...|+. +..+.++..++...+.+.|++.|.+++
T Consensus 275 sp~~a~l~~rgL~T-------l~lR~~r~~~Na~~la~~L~~~p~V~~ 315 (432)
T PRK06702 275 SPFNAYISNIGLET-------LHLRMERHSENALAVAKWLADHERIEW 315 (432)
T ss_pred CHHHHHHHHhccCc-------HHHHHHHHHHHHHHHHHHHHhCCCcce
Confidence 88877766666654 445556667888899999998877654
No 228
>PLN00144 acetylornithine transaminase
Probab=99.86 E-value=1.2e-19 Score=179.68 Aligned_cols=305 Identities=14% Similarity=0.117 Sum_probs=195.5
Q ss_pred cCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..||+..|.. .++- +|++.+++.+.+.+.. .++ .....+....+++.+.+.. ..+.|+++++++++++
T Consensus 13 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~-~~~-~~~~~~~~~~la~~l~~~~----~~~~v~f~~sGseA~e 86 (382)
T PLN00144 13 EGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLA-HVS-NVYHTIPQVELAKRLVASS----FADRVFFCNSGTEANE 86 (382)
T ss_pred CCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcC-Ccc-ccccCHHHHHHHHHHHhcC----CCCeEEEeCCcHHHHH
Confidence 5778999988853 3443 7899999999987532 121 1122445566777766442 2368999999999999
Q ss_pred HHHHHhcC----C-----------CCEEEEcCCCCCChHHHHHHcCCEE-E---EecCCCCCCC--CCCHHHHHhhccc-
Q 014172 170 QAVLAVCS----P-----------GDEVIIPAPFWVSYPEMARIADATP-V---ILPTRISENF--LLDPKVLESKLTE- 227 (429)
Q Consensus 170 ~~l~~l~~----~-----------gd~Vlv~~p~y~~~~~~~~~~g~~~-~---~v~~~~~~~~--~~d~e~l~~~l~~- 227 (429)
.+++.... . ..+|+....+|.+....+....... . +.|..+...+ -.|++.+++.+..
T Consensus 87 ~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~ 166 (382)
T PLN00144 87 AAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKG 166 (382)
T ss_pred HHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCCC
Confidence 98886521 0 2468888888887665444322211 0 0111000000 0278999988853
Q ss_pred CCcEEEEcCCCCCccCCCC--HHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCc-cccCCCCCCceEEEeccChhc
Q 014172 228 KSRLLILCSPSNPTGSVYP--KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS-FASLPGMWERTLTVNGFSKAF 304 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~~~~--~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~-~~~~~~~~~~~i~~~S~SK~~ 304 (429)
++++|++...+|| |.+++ .+.+++|.++|++| |+++|+||+|.++.+.+..... ...+.. + +.||||.+
T Consensus 167 ~~aavi~eP~q~~-gg~~~~~~~~~~~l~~l~~~~-g~llI~DEv~tg~gr~g~~~~~~~~~~~P--D----i~t~sK~l 238 (382)
T PLN00144 167 KTAAVFVEPVQGE-GGIYPATKEFLQGLRALCDEA-GALLVFDEVQCGLGRTGYLWAHEAYGVEP--D----IMTLAKPL 238 (382)
T ss_pred CeEEEEEccccCC-CCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCccchHhhhhhcCCCC--C----EEEecccc
Confidence 5667776545889 54444 44599999999999 9999999999987665532111 223322 2 88899999
Q ss_pred ccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceee
Q 014172 305 AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (429)
Q Consensus 305 ~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~ 384 (429)
+ +|.|+||+++++++++.+.......+++.+++++.++.+.|+.-. ..+..++..+.-+..++.+.+.+.+.|.+.-+
T Consensus 239 ~-~G~pig~v~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~-~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~v 316 (382)
T PLN00144 239 A-GGLPIGAVLVTEKVASAINPGDHGSTFAGGPLVCNAALAVLDKIS-KPGFLASVAKKGEYLRELLRRKLGGNPHVKEV 316 (382)
T ss_pred c-CCcceEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHh-hchHHHHHHHHHHHHHHHHHHHHhhCCCceee
Confidence 8 899999999999999888654455667788999988886665310 01222222222222244444555555443223
Q ss_pred cCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 385 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 385 ~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.. .|+++|+.+.. +..+++..++++ ||.+
T Consensus 317 rg-~G~~~~l~l~~-------------~~~~~~~~~~~~-Gv~i 345 (382)
T PLN00144 317 RG-VGLLVGIQLDV-------------PAGPLVDACRDS-GLLV 345 (382)
T ss_pred ec-CceEEEEEecC-------------ccHHHHHHHHHC-CeEE
Confidence 33 78889999831 456888888766 8875
No 229
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=9.6e-20 Score=180.82 Aligned_cols=212 Identities=14% Similarity=0.133 Sum_probs=156.4
Q ss_pred CHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChH----HHHHHcCCEEEEecCC
Q 014172 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVILPTR 209 (429)
Q Consensus 134 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~ 209 (429)
..+|++.+|++++ ....+++++| +.++..++. ++++||+|++++|.|++.. ..++..|++++.++..
T Consensus 56 ~~~le~~lA~l~g-------~~~~v~~~sG-~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~ 126 (390)
T PRK08064 56 REALEDIIAELEG-------GTKGFAFASG-MAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMT 126 (390)
T ss_pred HHHHHHHHHHHhC-------CCCeEEECCH-HHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCC
Confidence 4677888887753 2245555555 668887775 7789999999999998533 4456789999999862
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCC
Q 014172 210 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 289 (429)
Q Consensus 210 ~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~ 289 (429)
|++.+++.+++++++|++++|+||||.+.+ +++|.++|+++ ++++|+|++|...... .++ .
T Consensus 127 -------d~~~l~~~l~~~tklV~l~~p~NptG~~~d---l~~I~~la~~~-g~~vvvD~a~~~~~~~----~~~-~--- 187 (390)
T PRK08064 127 -------NLEEVAQNIKPNTKLFYVETPSNPLLKVTD---IRGVVKLAKAI-GCLTFVDNTFLTPLLQ----KPL-D--- 187 (390)
T ss_pred -------CHHHHHHhcCCCceEEEEECCCCCCcEecc---HHHHHHHHHHc-CCEEEEECCCCccccc----Cch-h---
Confidence 789999999999999999999999999998 88999999999 9999999999763211 111 1
Q ss_pred CCCceEEEeccChhcc-cccceeeEEEc-CHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 014172 290 MWERTLTVNGFSKAFA-MTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 367 (429)
Q Consensus 290 ~~~~~i~~~S~SK~~~-~~G~R~G~v~~-~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~ 367 (429)
.+.++++.|++|.++ .+|...|++++ ++++++.+......++...+...... ++.. .+.+..+.++..++
T Consensus 188 -~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l---~~~g----l~tl~~R~~~~~~~ 259 (390)
T PRK08064 188 -LGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWL---VLRG----LKTLHVRLEHSSET 259 (390)
T ss_pred -hCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHH---HHcc----cCcHHHHHHHHHHH
Confidence 345689999999985 33456787766 56888888887776665555444333 2221 23356666777788
Q ss_pred HHHHHHHhccCCCc
Q 014172 368 RDFLVKSFGELEGV 381 (429)
Q Consensus 368 r~~l~~~L~~l~g~ 381 (429)
+..+.+.|++.|.+
T Consensus 260 a~~la~~L~~~~~v 273 (390)
T PRK08064 260 ANKIALYLQEHPKV 273 (390)
T ss_pred HHHHHHHHhcCCCc
Confidence 88888888876544
No 230
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.86 E-value=2.8e-19 Score=175.44 Aligned_cols=318 Identities=15% Similarity=0.166 Sum_probs=214.9
Q ss_pred HHHHHHHHHhcCCCeEEcCCCCCCCCC-----hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCc
Q 014172 83 ITDQATALAQAGVSVIRLAAGEPDFDT-----PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQ 157 (429)
Q Consensus 83 ~~~~~~~~~~~g~~~i~L~~g~~~~~~-----p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~ 157 (429)
..++.+.+++.|.+...|...+-..+. ...+.++....+..+.-.|+.++...+|.+++++++ ..+.
T Consensus 17 ~~~r~~~l~~ag~n~f~l~~~~v~iDLltDsgT~aMs~~q~a~~~~GDe~yag~~s~~~lE~~va~~~--------G~~~ 88 (450)
T TIGR02618 17 REEREKKMQEAGYNTFLLNSEDVYIDLLTDSGTNAMSDKQWAGLMMGDEAYAGSRNFYHLERTVRELY--------GFKY 88 (450)
T ss_pred HHHHHHHHHHcCCCcccCccCceEEEcccCCCcHHHHHHHHHHhhhcchhhcCCCcHHHHHHHHHHHH--------CCCe
Confidence 345666777788777777777632221 255666633333334456988888999999999997 3457
Q ss_pred EEEecChHHHHHHHHHHhcCCCCEEEEcCCCCC-ChHHHHHHcCCEEEEecCCC--------CCCCCCCHHHHHhhccc-
Q 014172 158 ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV-SYPEMARIADATPVILPTRI--------SENFLLDPKVLESKLTE- 227 (429)
Q Consensus 158 i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~-~~~~~~~~~g~~~~~v~~~~--------~~~~~~d~e~l~~~l~~- 227 (429)
++.|++++.+++++....++|||.| +.++|. ++...+...|+.++.++.+. ..++.+|++.|++++++
T Consensus 89 av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~ 166 (450)
T TIGR02618 89 VVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEV 166 (450)
T ss_pred EEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccc
Confidence 9999999999998877788999987 667774 44455789999777775431 23477999999999976
Q ss_pred ---CCcEEEEcCCCCC-ccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcc-c-cc-----CCCCCCcc----ccCCCCCC
Q 014172 228 ---KSRLLILCSPSNP-TGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-I-IY-----APATHTSF----ASLPGMWE 292 (429)
Q Consensus 228 ---~~~~i~l~~p~NP-tG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~-~-~~-----~~~~~~~~----~~~~~~~~ 292 (429)
++++|.+.+++|- .|.+++.+++++|.++|++| |+.||+|.+... - .| .+....++ ..+.. .
T Consensus 167 ~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~-Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~--~ 243 (450)
T TIGR02618 167 GADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAH-GIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMS--Y 243 (450)
T ss_pred cCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHc-CCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhc--c
Confidence 3457778888884 58999999999999999999 999999999764 1 11 11122233 11111 1
Q ss_pred ceEEEeccChhcccc-cceeeEEE-cCHHHHHHHHHHhhcccC-----CCchHHHHHHHHHHhcCCCChHHHHHH-HHHH
Q 014172 293 RTLTVNGFSKAFAMT-GWRLGYIA-GPKHFVAACNKIQSQFTS-----GASSISQKAGVAALGLGYAGGEVVSKM-VKAF 364 (429)
Q Consensus 293 ~~i~~~S~SK~~~~~-G~R~G~v~-~~~~~~~~l~~~~~~~~~-----~~~~~~q~aa~~~l~~~~~~~~~~~~~-~~~~ 364 (429)
-..+..|..|..+.+ | |+++ .++++++.+++....+.. +...-...++...|.+ .++.. .+.-
T Consensus 244 aD~~~~S~~Kd~~~~~G---G~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e------~~~~~y~~~r 314 (450)
T TIGR02618 244 ADGCTMSGKKDCLVNIG---GFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIRE------AVDYEYIEHR 314 (450)
T ss_pred CcEEEEeeccCCCCCCc---eEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHH------hhhHHHHHHH
Confidence 225788888988755 4 7776 578888888877443311 1122233333334432 23322 2222
Q ss_pred HHHHHHHHHHhccCCCceeecCCceEEEEEecCCcc-CCcccCCCCCCChHHHHHHHHHhCCee
Q 014172 365 RERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYY-GSEAEGFGKIENSESLCRYLLDKAQVL 427 (429)
Q Consensus 365 ~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~Ll~~~gV~ 427 (429)
....++|.+.|.+. |+.+..|.+|.-++++..... +.....| ....++-.|..+.||-
T Consensus 315 ~~~a~~La~~L~~~-Gvpv~~p~ggh~V~vda~~~lph~~~~~~----p~~al~~~ly~~~gir 373 (450)
T TIGR02618 315 VKQVRYLGDKLKAA-GVPIVEPVGGHAVFLDARRFLPHIPQDQF----PAQSLAASIYVETGVR 373 (450)
T ss_pred HHHHHHHHHHHHHC-CCcccCCCCcceEEEEhHHhCCCCChhhC----hHHHHHHHHHHHhCcc
Confidence 33467888899888 999888888888999876531 1122233 6889999999998874
No 231
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.86 E-value=1.9e-19 Score=178.06 Aligned_cols=222 Identities=16% Similarity=0.186 Sum_probs=156.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH----HHHHcCC
Q 014172 126 TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADA 201 (429)
Q Consensus 126 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~ 201 (429)
..|+.. |.+ .++++++.+.+..|. ++++++++++.++..++. ++++||+|+++++.|.++.. .+...|+
T Consensus 39 ~~Y~r~-~~p-~~~~le~~la~l~g~----~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~ 111 (378)
T TIGR01329 39 YDYTRS-GNP-TRTALESLLAKLDKA----DRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGV 111 (378)
T ss_pred CccCCC-CCh-HHHHHHHHHHHHhCC----CcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCc
Confidence 456543 322 234444444444452 466777777789987765 78999999999999988654 3456899
Q ss_pred EEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCC
Q 014172 202 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 281 (429)
Q Consensus 202 ~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~ 281 (429)
+++.++. .|++.+++++++++|+|++++|+||||.+.+ +++|+++|++| |+++|+|++|.... ..
T Consensus 112 ~v~~vd~-------~d~~~le~~i~~~tklv~le~psnptg~v~d---l~~I~~la~~~-g~~vivD~a~~~~~----~~ 176 (378)
T TIGR01329 112 VVVHVDT-------TDLDKVKAALGPKTKLVLLESPTNPLQKIVD---IRKISEMAHAQ-NALVVVDNTMMSPL----LC 176 (378)
T ss_pred EEEEeCC-------CCHHHHHHhcCcCceEEEEECCCCCCCeeec---HHHHHHHHHHc-CCEEEEECCCcccc----cC
Confidence 9999986 2899999999999999999999999999999 99999999999 99999999985421 11
Q ss_pred CccccCCCCCCceEEEeccChhccc-ccceeeEEEc-CHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHH
Q 014172 282 TSFASLPGMWERTLTVNGFSKAFAM-TGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 359 (429)
Q Consensus 282 ~~~~~~~~~~~~~i~~~S~SK~~~~-~G~R~G~v~~-~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~ 359 (429)
.++ . .+..+++.|++|.++- .+.+.|++++ ++.+.+.+.......+.+.+......+...+ +.+..
T Consensus 177 ~~l-~----~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l-------~tl~~ 244 (378)
T TIGR01329 177 NPL-E----LGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLLRGI-------KTLAI 244 (378)
T ss_pred Chh-h----cCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHHccC-------CCHHH
Confidence 122 1 2345999999998853 3477999987 4556677776655445455555433222222 23555
Q ss_pred HHHHHHHHHHHHHHHhccCCCc
Q 014172 360 MVKAFRERRDFLVKSFGELEGV 381 (429)
Q Consensus 360 ~~~~~~~~r~~l~~~L~~l~g~ 381 (429)
+.++..++...+.+.|++.|.+
T Consensus 245 R~e~~~~na~~la~~L~~~~~v 266 (378)
T TIGR01329 245 RIEKQQENARAIAMFLSTHPRV 266 (378)
T ss_pred HHHHHHHHHHHHHHHHHhCCCc
Confidence 6666667777777777766544
No 232
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.86 E-value=7.9e-20 Score=183.73 Aligned_cols=312 Identities=15% Similarity=0.198 Sum_probs=200.0
Q ss_pred cCCCeEEcCCCCCCC--C-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGEPDF--D-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~~~~--~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.++|+..|.+.. + .+|.+.+++.+.+.+....|.+..+..+|.+.+++.+ . ..+.+++++++++++.
T Consensus 48 dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~la~~L~~~~----~---~~~~v~~~~sGseA~e 120 (426)
T PRK00062 48 DGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGLSFGAPTELEVELAELVIELV----P---SIEMVRMVNSGTEATM 120 (426)
T ss_pred CCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhC----C---CCCEEEEecCHHHHHH
Confidence 578899999987543 2 4789999999998765444445444455555555543 1 3468999999999999
Q ss_pred HHHHHhcC--CCCEEEEcCCCCCChHHHHHHc-CC------------EEE-----EecCCCCCCCCCCHHHHHhhcc---
Q 014172 170 QAVLAVCS--PGDEVIIPAPFWVSYPEMARIA-DA------------TPV-----ILPTRISENFLLDPKVLESKLT--- 226 (429)
Q Consensus 170 ~~l~~l~~--~gd~Vlv~~p~y~~~~~~~~~~-g~------------~~~-----~v~~~~~~~~~~d~e~l~~~l~--- 226 (429)
.+++.... .++.|+..+++|+++...+... |. ..+ .+.. .. .|++.+++.+.
T Consensus 121 ~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~d~~~l~~~i~~~~ 195 (426)
T PRK00062 121 SAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTA--PY---NDLEAVEELFEEYG 195 (426)
T ss_pred HHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEc--CC---CCHHHHHHHHHhCC
Confidence 99988643 2578999999999986433322 11 000 0111 01 27888888775
Q ss_pred cCCcEEEEcCCCCCccCCCC-HHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcc
Q 014172 227 EKSRLLILCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 305 (429)
Q Consensus 227 ~~~~~i~l~~p~NPtG~~~~-~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 305 (429)
+++.+|++......+|.+.+ .+.+++|.++|++| |+++|.||+|.++.+++.......... .+ +.+|||.++
T Consensus 196 ~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~-~~llI~DEv~~G~r~g~~~~~~~~~~~--pD----i~~~gK~l~ 268 (426)
T PRK00062 196 DEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEH-GALLIFDEVMTGFRVALGGAQGYYGVT--PD----LTTLGKIIG 268 (426)
T ss_pred CcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeechhccccCCccHHHHhCCC--cc----hHhhhhHhh
Confidence 35667777644555898876 78899999999999 999999999998744321111111111 12 578999999
Q ss_pred cccceeeEEEcCHHHHHHHHHH---hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCce
Q 014172 306 MTGWRLGYIAGPKHFVAACNKI---QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK 382 (429)
Q Consensus 306 ~~G~R~G~v~~~~~~~~~l~~~---~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~ 382 (429)
.||++|++++++++++.+... ....+++.+++.+.++.++|+.-. .++.+++.++..+..++.+.+.+.+. ++.
T Consensus 269 -~G~p~ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~ 345 (426)
T PRK00062 269 -GGLPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLK-EPGFYEELEALTKRLAEGLKEAAKKA-GIP 345 (426)
T ss_pred -CCCcceeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHHHc-CCc
Confidence 899999999999999888532 222345688999999988887521 12355556666666666666555555 433
Q ss_pred e-ecCCceEEEEEecCC-ccCCcccCCCC-CCChHHHHHHHHHhCCeec
Q 014172 383 M-SEPQGAFYLFIDFST-YYGSEAEGFGK-IENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 383 ~-~~p~~~~~~~~~l~~-~~~~~~~~~~~-~~~~~~~~~~Ll~~~gV~v 428 (429)
. .++.|.|+. +.+.. ..........+ ......+...|+++ ||.+
T Consensus 346 ~~vrg~G~~~~-i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~-Gv~v 392 (426)
T PRK00062 346 LTVNRVGSMFG-LFFTDEPVTNYADAKKSDTERFARFFHAMLDE-GVYL 392 (426)
T ss_pred eEEEEecceEE-EEEecCCCcchhhhccccHHHHHHHHHHHHHC-CeEe
Confidence 3 356676653 33321 00000000000 00135788888876 8875
No 233
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.85 E-value=2.6e-19 Score=177.24 Aligned_cols=287 Identities=18% Similarity=0.246 Sum_probs=205.5
Q ss_pred CChHHHHHHHHHHHHcCCC-----CCCCCCCCHHHHHHHHHHHHhhcCCCCCC-CcEEEecChHHHHHHHHHHh---cCC
Q 014172 108 DTPVLIAEAGINAIREGFT-----RYTPNAGTLELRSAICHKLKEENGLSYTP-DQILVSNGAKQSILQAVLAV---CSP 178 (429)
Q Consensus 108 ~~p~~v~~a~~~~~~~~~~-----~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-~~i~~t~G~~~al~~~l~~l---~~~ 178 (429)
+.|+.+++++.+.+.+... .+.......++.+.+.+.+.+..| .++ ++|++++|++.+++.++..+ +++
T Consensus 10 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg--~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~ 87 (371)
T PF00266_consen 10 PMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLG--APPDEEVVFTSNGTEALNAVASSLLNPLKP 87 (371)
T ss_dssp B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHT--SSTTEEEEEESSHHHHHHHHHHHHHHHGTT
T ss_pred CCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcC--Cccccccccccccchhhhhhhhcccccccc
Confidence 4578899999988764211 111111123344444444444455 355 79999999999999999999 789
Q ss_pred CCEEEEcCCCCCChH----HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHH
Q 014172 179 GDEVIIPAPFWVSYP----EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 254 (429)
Q Consensus 179 gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~ 254 (429)
||+|++..-.|++.. ...+..|++++.++.+.+ ..+|++++++.++++++++++++.+|-||..+| +++|.
T Consensus 88 g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~--~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~p---i~~I~ 162 (371)
T PF00266_consen 88 GDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPG--GSLDLEDLEEALNPDTRLVSISHVENSTGVRNP---IEEIA 162 (371)
T ss_dssp TCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTT--SSCSHHHHHHHHHTTESEEEEESBETTTTBBSS---HHHHH
T ss_pred ccccccccccccccccccccccccchhhhcccccccc--chhhhhhhhhhhccccceEEeecccccccEEee---eceeh
Confidence 999999999888765 344577999999987643 458999999999999999999999999999999 99999
Q ss_pred HHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhc----
Q 014172 255 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ---- 330 (429)
Q Consensus 255 ~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~---- 330 (429)
++|+++ ++++++|.+++. |..+..+.. .+.+++++|..|.+|.+| +|+++.+++.++.+......
T Consensus 163 ~~~~~~-~~~~~vD~~~~~----g~~~id~~~----~~~D~~~~s~~Kl~gp~G--~g~l~v~~~~~~~~~p~~~~~~~~ 231 (371)
T PF00266_consen 163 KLAHEY-GALLVVDAAQSA----GCVPIDLDE----LGADFLVFSSHKLGGPPG--LGFLYVRPEAIERLRPAKPGGGYL 231 (371)
T ss_dssp HHHHHT-TSEEEEE-TTTT----TTSS--TTT----TTESEEEEESTSTTSSST--EEEEEEEHHHHHHHHTSSSSSSTT
T ss_pred hhhhcc-CCceeEechhcc----ccccccccc----cccceeeecccccCCCCc--hhhheehhhhhhcccccccccccc
Confidence 999999 999999999986 222222222 355689999999444444 89999999988887422111
Q ss_pred -----------------ccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC-----Cc
Q 014172 331 -----------------FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP-----QG 388 (429)
Q Consensus 331 -----------------~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p-----~~ 388 (429)
...+++.+...++..+++.- .+..+++..++..+..+++.+.|++++++.+..| .+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~--~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~ 309 (371)
T PF00266_consen 232 DFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLL--EEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRP 309 (371)
T ss_dssp THHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGT
T ss_pred ccccchhcccccccccccccceeeehhhhHHHHHhhh--hccccccchhhhhhHHHHHHhhhhcCCceeEeeeccccccc
Confidence 11235555556666666641 1345777888899999999999999988887543 23
Q ss_pred eEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 389 AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 389 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+. +.+.++.. +..++.++|.++ ||.+
T Consensus 310 ~i-~~~~~~~~------------~~~~~~~~L~~~-~I~~ 335 (371)
T PF00266_consen 310 SI-VSFNLPGS------------DADDVVKYLEER-GIAV 335 (371)
T ss_dssp TE-EEEEETTS------------SHHHHHHHHHHH-TEEE
T ss_pred ce-EEEeecCC------------CHHHHHHHHhhc-CEEE
Confidence 44 55666543 688999988887 8876
No 234
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.85 E-value=6.6e-19 Score=176.61 Aligned_cols=318 Identities=14% Similarity=0.106 Sum_probs=201.6
Q ss_pred hcCCCeEEcCCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 92 QAGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 92 ~~g~~~i~L~~g~~~--~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
..|+..||+..|... ++- +|.+.+++.+++.+.. .........+....+++.+.+..+. ...+.+++++++++++
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~-~~~~~~~~~~~~~~la~~l~~~~p~-~~~~~~~f~~sGseA~ 114 (421)
T PRK09792 37 VEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFT-HTAYQIVPYESYVTLAEKINALAPV-SGQAKTAFFTTGAEAV 114 (421)
T ss_pred CCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhcc-CcccCccCCHHHHHHHHHHHHhCCC-CCCceEEEeCChHHHH
Confidence 357889999887633 333 7899999999987532 1111112344555666666654321 1225899999999999
Q ss_pred HHHHHHhcC-CC-CEEEEcCCCCCChHHHHHH-cCC-------------EEEEecCCCCCCCCC----CHHHHHhhcc--
Q 014172 169 LQAVLAVCS-PG-DEVIIPAPFWVSYPEMARI-ADA-------------TPVILPTRISENFLL----DPKVLESKLT-- 226 (429)
Q Consensus 169 ~~~l~~l~~-~g-d~Vlv~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~~~~~~----d~e~l~~~l~-- 226 (429)
+.+++.... .| .+|+....+|.+....+.. .|. .++.+|...+. ..+ +++.+++.+.
T Consensus 115 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~~~~~~~ 193 (421)
T PRK09792 115 ENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIERLFKSD 193 (421)
T ss_pred HHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHHHHHHhc
Confidence 998887642 23 5788888888876433322 221 12233332111 112 3477777775
Q ss_pred ---cCCcEEEEcCCCCCccCCC-CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccCh
Q 014172 227 ---EKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSK 302 (429)
Q Consensus 227 ---~~~~~i~l~~p~NPtG~~~-~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 302 (429)
++..+|++...++|+|..+ +.+.+++|.++|++| ++++|+||+|.++.+.|. ...+..+....+ +.+|||
T Consensus 194 ~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEv~tg~gr~G~-~~a~~~~~~~pD----i~t~gK 267 (421)
T PRK09792 194 IEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEH-GIVMIADEVQSGFARTGK-LFAMDHYADKPD----LMTMAK 267 (421)
T ss_pred cCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCCCCc-hhHHHhcCCCCc----EEEeeh
Confidence 3466777766689999765 899999999999999 999999999999866553 233333322222 678999
Q ss_pred hcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHh-ccCCCc
Q 014172 303 AFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSF-GELEGV 381 (429)
Q Consensus 303 ~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L-~~l~g~ 381 (429)
.++ +|+|+||+++++++++.+.......+++.+.+++.++.+.++.-. ..+++++.+ .+.++.+...+.| +++|.
T Consensus 268 ~l~-~G~pigav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~-~~~~~~~~~-~~g~~l~~~l~~l~~~~p~- 343 (421)
T PRK09792 268 SLA-GGMPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIID-KESLCERAN-QLGQRLKNTLIDAKESVPA- 343 (421)
T ss_pred hhc-CCCceEEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHH-hhhHHHHHH-HHHHHHHHHHHHHHHhCCC-
Confidence 999 999999999999998887654455667789999997777776411 123444444 3333333333333 33543
Q ss_pred eeecCCc-eEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 382 KMSEPQG-AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 382 ~~~~p~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+..+.| |+++|+.+++... ..........++..++++ ||.+
T Consensus 344 -v~~vrG~Gl~~~ie~~~~~~----~~~~~~~~~~l~~~~~~~-Gv~i 385 (421)
T PRK09792 344 -IAAVRGLGSMIAAEFNDPQT----GEPSAAIAQKIQQRALAQ-GLLL 385 (421)
T ss_pred -cceecccceEEEEEecCCcc----CCcchHHHHHHHHHHHHC-CcEE
Confidence 234666 8889999964200 000001356788888776 8865
No 235
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.84 E-value=6.1e-19 Score=176.35 Aligned_cols=302 Identities=14% Similarity=0.129 Sum_probs=199.2
Q ss_pred cCCCeEEcCCCCCCCCC---hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGEPDFDT---PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~~~~~~---p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..||+..|...... +|++.+++.+.+.+... .++ ....+....+++.+.+.+| .+.+++++++++++.
T Consensus 35 ~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~-~~~-~~~~~~~~~l~~~l~~~~~----~~~~~~~~SGs~A~e 108 (401)
T TIGR01885 35 EGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTL-SSR-AFYNDVFGEFAEYVTKLFG----YDKVLPMNTGAEAVE 108 (401)
T ss_pred CCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccc-ccc-ccCCHHHHHHHHHHHhhcC----CCEEEEeCccHHHHH
Confidence 57789999988655443 79999999998865221 111 1123444555555555544 258999999999999
Q ss_pred HHHHHhc---------CC-CCEEEEcCCCCCCh-HHHHHHcCC------------EEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 170 QAVLAVC---------SP-GDEVIIPAPFWVSY-PEMARIADA------------TPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 170 ~~l~~l~---------~~-gd~Vlv~~p~y~~~-~~~~~~~g~------------~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
.++.... .+ .+.|+...-+|.+. ...+...|- .++.++. .|++.+++.+.
T Consensus 109 ~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~ 181 (401)
T TIGR01885 109 TAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-------NNLEALEEALE 181 (401)
T ss_pred HHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-------CCHHHHHHHHH
Confidence 9988752 13 36777788887753 444443321 1233332 27888888875
Q ss_pred ---cCCcEEEEcCCCCCccCCCCHH-HHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccCh
Q 014172 227 ---EKSRLLILCSPSNPTGSVYPKN-LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSK 302 (429)
Q Consensus 227 ---~~~~~i~l~~p~NPtG~~~~~~-~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 302 (429)
++..+|++..+++++|.+.+.+ .+++|.++|++| ++++|+||+|..+.+.|.. ... ...+.... + .+|||
T Consensus 182 ~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~-~~lli~DEv~~g~g~~G~~-~~~-~~~~~~~d-i--~~~gK 255 (401)
T TIGR01885 182 DHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKH-NVLLIADEIQTGLGRTGKL-LCV-DHENVKPD-I--VLLGK 255 (401)
T ss_pred hcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCccchh-hHH-hhcCCCCC-E--EEeec
Confidence 3566777888899999988655 699999999999 9999999999876554432 111 11111122 2 24789
Q ss_pred hcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC-Cc
Q 014172 303 AFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE-GV 381 (429)
Q Consensus 303 ~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~-g~ 381 (429)
.++..|+|+||+++++++++.+.......+++.+++.+.++.++|+. .++ ..+.++.+++.+++.+.|+++. ++
T Consensus 256 ~l~~g~~~ig~v~~~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~---i~~--~~l~~~~~~~~~~~~~~L~~l~~~~ 330 (401)
T TIGR01885 256 ALSGGVYPVSAVLADDDVMLTIKPGEHGSTYGGNPLACAVAVAALEV---LEE--EKLAENAEKLGEIFRDQLKKLPKPI 330 (401)
T ss_pred cccCCCCCcEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHH---HHh--ccHHHHHHHHHHHHHHHHHhccCCc
Confidence 99866699999999999988876533334556788899999888875 222 1344566677888999998872 22
Q ss_pred -eeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 382 -KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 382 -~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
...++.|.|+. +.++.. . ...+..+++++|.++ ||.+
T Consensus 331 ~~~~~g~g~~~~-i~~~~~-~-------~~~~~~~l~~~l~~~-Gv~v 368 (401)
T TIGR01885 331 ITEVRGRGLLNA-IVIDES-K-------TGRTAWDLCLKLKEK-GLLA 368 (401)
T ss_pred eeEEeecCeeEE-EEeccC-c-------chhHHHHHHHHHHhC-CEEE
Confidence 23356676654 333221 0 001467899998765 9875
No 236
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.84 E-value=5.4e-19 Score=174.68 Aligned_cols=214 Identities=14% Similarity=0.152 Sum_probs=149.5
Q ss_pred CCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChH----HHHHHcCCEEEEecC
Q 014172 133 GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVILPT 208 (429)
Q Consensus 133 G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~ 208 (429)
....|++.++++. | .+.. +++++++.++.+++ .++++||+|++++|.|.+.. ..+...|++++.++.
T Consensus 51 ~~~~Le~~la~l~----g---~~~a-l~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~ 121 (380)
T PRK06176 51 TRFALEELIADLE----G---GVKG-FAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT 121 (380)
T ss_pred hHHHHHHHHHHHh----C---CCCE-EEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC
Confidence 3567777777775 3 2234 44455566888655 57899999999999987653 345668999888874
Q ss_pred CCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCC
Q 014172 209 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 288 (429)
Q Consensus 209 ~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~ 288 (429)
.|++++++++++++++|++++|+||||.+.+ +++|.++|++| ++++|+|++|....+. . ++ .
T Consensus 122 -------~d~e~l~~ai~~~t~lV~lesP~Nptg~~~d---i~~I~~la~~~-gi~vivD~t~a~~~~~-~---p~-~-- 183 (380)
T PRK06176 122 -------SDLSQIKKAIKPNTKALYLETPSNPLLKITD---LAQCASVAKDH-GLLTIVDNTFATPYYQ-N---PL-L-- 183 (380)
T ss_pred -------CCHHHHHHhcCcCceEEEEECCCCCCceecC---HHHHHHHHHHc-CCEEEEECCccccccC-C---cc-c--
Confidence 3899999999999999999999999999999 88999999999 9999999999864322 1 11 1
Q ss_pred CCCCceEEEeccChhccccc-ceeeEEEcC-HHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 014172 289 GMWERTLTVNGFSKAFAMTG-WRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRE 366 (429)
Q Consensus 289 ~~~~~~i~~~S~SK~~~~~G-~R~G~v~~~-~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~ 366 (429)
.+..+++.|++|.++.+| .-.|++++. +++.+.+...+.....+.+......+...+ +.+..+.++..+
T Consensus 184 --~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl-------~tl~~R~~~~~~ 254 (380)
T PRK06176 184 --LGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRGI-------KTLGLRMEAHQK 254 (380)
T ss_pred --cCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCCCHHHHHHHHhcc-------CcHHHHHHHHHH
Confidence 345599999999997555 346777764 566677766555444444444433222222 223444455555
Q ss_pred HHHHHHHHhccCCCce
Q 014172 367 RRDFLVKSFGELEGVK 382 (429)
Q Consensus 367 ~r~~l~~~L~~l~g~~ 382 (429)
+...+.+.|++.|.+.
T Consensus 255 ~a~~la~~L~~~p~v~ 270 (380)
T PRK06176 255 NALCVAEFLEKHPKVE 270 (380)
T ss_pred HHHHHHHHHHhCCCee
Confidence 6666777777665543
No 237
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.84 E-value=2.1e-18 Score=170.65 Aligned_cols=260 Identities=16% Similarity=0.134 Sum_probs=165.2
Q ss_pred CeEEcCCCC-CCCCChHHHHHHHHHHHHcCC--------CCCCC--CCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecCh
Q 014172 96 SVIRLAAGE-PDFDTPVLIAEAGINAIREGF--------TRYTP--NAGTLELRSAICHKLKEENGLSYTPDQILVSNGA 164 (429)
Q Consensus 96 ~~i~L~~g~-~~~~~p~~v~~a~~~~~~~~~--------~~Y~~--~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~ 164 (429)
++|+|+.++ .++..++.+.+++.+++.+.. +..+. ..|..++.+.+.+.+.+.+|. ++.+++++|+
T Consensus 5 ~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~---~~~l~~~sG~ 81 (370)
T PRK05937 5 LSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGA---PEAFIVPSGY 81 (370)
T ss_pred ceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCC---CeEEEECChH
Confidence 489999888 788888888888887775421 11111 123334444444444444442 3456777776
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------CCcEEEEcCCC
Q 014172 165 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPS 238 (429)
Q Consensus 165 ~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~~~~i~l~~p~ 238 (429)
.. +..++..+.++||.|++..-.|.+....++......+.++. .|++.+++.+++ ++++|++++++
T Consensus 82 ~a-~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~v~~v~ 153 (370)
T PRK05937 82 MA-NLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFRH-------NDLDHLESLLESCRQRSFGRIFIFVCSVY 153 (370)
T ss_pred HH-HHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHhhhccCCCcEEEEEecCC
Confidence 54 44455666678899988888888888877776544444432 489999988862 35566789999
Q ss_pred CCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCH
Q 014172 239 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK 318 (429)
Q Consensus 239 NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~ 318 (429)
|++|.+.| +++|.++|+++ |+++++||+|....++.........+. ..+.++.+.||||.+|..| +.+++.+
T Consensus 154 s~~G~i~p---l~eI~~l~~~~-~~~livDea~~~G~~g~~g~g~~~~~~-~~~~~~~~~tlsK~~g~~G---~~vl~~~ 225 (370)
T PRK05937 154 SFKGTLAP---LEQIIALSKKY-HAHLIVDEAHAMGIFGDDGKGFCHSLG-YENFYAVLVTYSKALGSMG---AALLSSS 225 (370)
T ss_pred CCCCCccC---HHHHHHHHHHc-CCEEEEECCccccccCCCCCchHHhhC-CCCCcEEEEechhhhhcCc---eEEEcCH
Confidence 99999999 99999999999 999999999986544322111111111 1122367899999999767 3355666
Q ss_pred HHHHHHHHHhh--cccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 014172 319 HFVAACNKIQS--QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 377 (429)
Q Consensus 319 ~~~~~l~~~~~--~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 377 (429)
++...+..... .+..+.+.+...++.++++. ..+..+..++++++.++++.+.|..
T Consensus 226 ~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~---l~~~~~~~~~~l~~l~~~l~~~l~~ 283 (370)
T PRK05937 226 EVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDF---LSQEGELARKQLFRLKEYFAQKFSS 283 (370)
T ss_pred HHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHH---HHhCcHHHHHHHHHHHHHHHHhcCC
Confidence 66555543211 22334555565555555543 1111234567778888888887764
No 238
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.84 E-value=1.4e-18 Score=174.32 Aligned_cols=287 Identities=12% Similarity=0.086 Sum_probs=192.3
Q ss_pred cCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..+|+..|.. .++- +|++.+++.+.+.+..+ ........+....+++.+.+..+. -..+.++++++++++++
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~-~~~~~~~~~~~~~la~~l~~~~p~-~~~~~~~f~~sGseA~e 115 (421)
T PRK06777 38 EGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTH-TAYQIVPYASYVTLAERINALAPI-DGPAKTAFFTTGAEAVE 115 (421)
T ss_pred CCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhccc-ccccccCChHHHHHHHHHHHhCCC-CCCceEEEeCCcHHHHH
Confidence 5788999988863 3343 78899999999876321 111111234455666666654321 12368999999999999
Q ss_pred HHHHHhcC-CC-CEEEEcCCCCCChHHHHHH-cCCE-------------EEEecCCCCCC---CCCCHHHHHhhcc----
Q 014172 170 QAVLAVCS-PG-DEVIIPAPFWVSYPEMARI-ADAT-------------PVILPTRISEN---FLLDPKVLESKLT---- 226 (429)
Q Consensus 170 ~~l~~l~~-~g-d~Vlv~~p~y~~~~~~~~~-~g~~-------------~~~v~~~~~~~---~~~d~e~l~~~l~---- 226 (429)
.+++.... .| ..|+....+|.+....+.. .|.. +..++...... ..-+++.+++.+.
T Consensus 116 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~ 195 (421)
T PRK06777 116 NAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIA 195 (421)
T ss_pred HHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccC
Confidence 98886532 23 5688888888876544432 2211 11122111000 0013566777664
Q ss_pred -cCCcEEEEcCCCCCccC-CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhc
Q 014172 227 -EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF 304 (429)
Q Consensus 227 -~~~~~i~l~~p~NPtG~-~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 304 (429)
++..+|++...++..|. +++.+.+++|.++|++| |+++|.||+|.++.+.|. ......+....+ +.+|||.+
T Consensus 196 ~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEv~tg~gr~g~-~~~~~~~~~~pD----iv~~sK~l 269 (421)
T PRK06777 196 PDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEH-GILLIADEVQTGFARTGK-LFAMEYYDVKPD----LITMAKSL 269 (421)
T ss_pred CCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCccCCc-hhhhhhcCCCCC----EEeeehhh
Confidence 24566666666778885 67899999999999999 999999999998766553 222222321122 34799999
Q ss_pred ccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC----CC
Q 014172 305 AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL----EG 380 (429)
Q Consensus 305 ~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l----~g 380 (429)
+ +|+|+||+++++++++.+.......+++.+++++.++.++|+. .++ +++.++++++.+++.+.|+++ +.
T Consensus 270 ~-~G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~---~~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~ 343 (421)
T PRK06777 270 G-GGMPISAVVGRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLDV---IAE--EKLCQRALILGAHLVEVLEKAKASCPA 343 (421)
T ss_pred c-CCCceEEEEEcHHHHhccCCCCCCCCCCcCHHHHHHHHHHHHH---HHh--ccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9 9999999999999998887655556777899999999999975 222 356777777888888887764 44
Q ss_pred ceeecCCceEEEE
Q 014172 381 VKMSEPQGAFYLF 393 (429)
Q Consensus 381 ~~~~~p~~~~~~~ 393 (429)
+..+++.|.||.+
T Consensus 344 i~~vrg~G~~~~i 356 (421)
T PRK06777 344 IVDIRARGSMVAV 356 (421)
T ss_pred eEEecCceEEEEE
Confidence 5667899988764
No 239
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.83 E-value=2.5e-18 Score=169.58 Aligned_cols=274 Identities=19% Similarity=0.286 Sum_probs=185.4
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCEEEEcCCCC
Q 014172 111 VLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFW 189 (429)
Q Consensus 111 ~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l-~~~gd~Vlv~~p~y 189 (429)
.+..+++.+.+++++... ...-..+|++++++++ ..++++.++++|.||.+++.++ +++||+|+++..+|
T Consensus 5 ~e~~~~v~~~l~s~~~~~-~g~~~~~fE~~~a~~~--------g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~ 75 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWLST-YGPYVEEFEKEFAEYF--------GVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTF 75 (363)
T ss_dssp HHHHHHHHHHHHHTCCSS-SSHHHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-
T ss_pred HHHHHHHHHHHHhCCccC-CCHHHHHHHHHHHHHh--------CCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcc
Confidence 566778888887764332 1234578888888887 3568899999999999999998 57999999999999
Q ss_pred CChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEcc
Q 014172 190 VSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDE 269 (429)
Q Consensus 190 ~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~De 269 (429)
......+...|++++++++++ +++.+|++.+++++++++++|++.+ .-|...+ +++|.++|++| |++||+|.
T Consensus 76 ~~~~~ai~~~G~~pv~~Di~~-~~~~id~~~~~~~i~~~t~ai~~~h---~~G~~~d---~~~i~~~~~~~-~i~lIeD~ 147 (363)
T PF01041_consen 76 PATASAILWAGAEPVFVDIDP-ETLNIDPEALEKAITPKTKAILVVH---LFGNPAD---MDAIRAIARKH-GIPLIEDA 147 (363)
T ss_dssp THHHHHHHHTT-EEEEE-BET-TTSSB-HHHHHHHHHTTEEEEEEE----GGGB------HHHHHHHHHHT-T-EEEEE-
T ss_pred hHHHHHHHHhccEEEEEeccC-CcCCcCHHHHHHHhccCccEEEEec---CCCCccc---HHHHHHHHHHc-CCcEEEcc
Confidence 999999999999999999986 4588999999999999999999644 4677776 99999999999 99999999
Q ss_pred CCcccc-cCCCCCCccccCCCCCCceEEEecc--ChhcccccceeeEEEcC-HHHHHHHHHHhhcc--------------
Q 014172 270 IYEHII-YAPATHTSFASLPGMWERTLTVNGF--SKAFAMTGWRLGYIAGP-KHFVAACNKIQSQF-------------- 331 (429)
Q Consensus 270 ay~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~--SK~~~~~G~R~G~v~~~-~~~~~~l~~~~~~~-------------- 331 (429)
+++... |.|.. +..+. .+.+.|| +|.+. .| ..|+++++ +++.+.++.+....
T Consensus 148 a~a~g~~~~g~~---~G~~g-----d~~~fSf~~~K~i~-~g-eGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 217 (363)
T PF01041_consen 148 AQAFGARYKGRP---VGSFG-----DIAIFSFHPTKIIT-TG-EGGAVVTNDPELAERARALRNHGRSRDAFRRYRHELP 217 (363)
T ss_dssp TTTTT-EETTEE---TTSSS-----SEEEEESSTTSSS--SS-S-EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSS
T ss_pred ccccCceeCCEe---ccCCC-----CceEecCCCCCCCc-CC-CCeeEEecHHHHHHHhhhhhccCcCcccccccccccc
Confidence 999754 23321 11221 3778888 48774 33 34888775 56777776554221
Q ss_pred ---cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceee-cCCc----eE-EEEEecCCccCC
Q 014172 332 ---TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-EPQG----AF-YLFIDFSTYYGS 402 (429)
Q Consensus 332 ---~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~-~p~~----~~-~~~~~l~~~~~~ 402 (429)
++.++.+..+.+...|+ .+++..+.-+++.+.+.+.|.+++++... .+.+ .+ ...+.++...
T Consensus 218 ~g~n~rm~~~~AAigl~QL~-------~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~-- 288 (363)
T PF01041_consen 218 PGYNFRMSELQAAIGLAQLK-------RLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEA-- 288 (363)
T ss_dssp S--B-B-BHHHHHHHHHHHH-------THHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCG--
T ss_pred CCcccccHHHHHHHHHHHHH-------HhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccccc--
Confidence 12244444444444444 36666777778888899999998876443 2222 22 2234444310
Q ss_pred cccCCCCCCChHHHHHHHHHhCCeec
Q 014172 403 EAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 403 ~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
..+.+++.+.|.++ ||.+
T Consensus 289 -------~~~rd~l~~~L~~~-GI~~ 306 (363)
T PF01041_consen 289 -------LADRDELVEALRAR-GIET 306 (363)
T ss_dssp -------CSTHHHHHHHHHHT-TBEE
T ss_pred -------cchHHHHHHHHHHC-CCcc
Confidence 02578899888776 8864
No 240
>PLN02624 ornithine-delta-aminotransferase
Probab=99.83 E-value=2.1e-18 Score=175.24 Aligned_cols=303 Identities=13% Similarity=0.112 Sum_probs=191.4
Q ss_pred cCCCeEEcCCCCCCCCC---hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGEPDFDT---PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~~~~~~---p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..||+..|...... +|.+.+++.+.+.+.. +....-..+....+++.+.+..+ .+.+++++++++++.
T Consensus 73 dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~--~~~~~~~~~~~~~la~~L~~~~~----~~~~~f~~SGseA~e 146 (474)
T PLN02624 73 EGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLT--LSSRAFYNDKFPEFAEYLTSMFG----YDMVLPMNTGAEGVE 146 (474)
T ss_pred CCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcC--CcccccCCHHHHHHHHHHHhhcC----CCeEEEeCChHHHHH
Confidence 57789999888654444 7999999999987632 11111122334445555554443 358999999999999
Q ss_pred HHHHHhcC---------CCC-EEEEcCCCCCChHHHHHHcCCE-------------EEEecCCCCCCCCCCHHHHHhhcc
Q 014172 170 QAVLAVCS---------PGD-EVIIPAPFWVSYPEMARIADAT-------------PVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 170 ~~l~~l~~---------~gd-~Vlv~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
.+++.... ++. .|+...-+|.+....+...... +..++. -|++.+++.++
T Consensus 147 ~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~ 219 (474)
T PLN02624 147 TAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-------GDLDALEKIFE 219 (474)
T ss_pred HHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-------CCHHHHHHHHH
Confidence 98875432 133 5777777777654333222111 122221 17888888885
Q ss_pred ---cCCcEEEEcCCCCCccCCCCHH-HHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccCh
Q 014172 227 ---EKSRLLILCSPSNPTGSVYPKN-LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSK 302 (429)
Q Consensus 227 ---~~~~~i~l~~p~NPtG~~~~~~-~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 302 (429)
+++.+|++..++|++|.+++.+ .+++|.++|++| |+++|.||+|.++.+.|... .. ...+.. .-+.+|||
T Consensus 220 ~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~-gillI~DEv~tG~GrtG~~~-a~-~~~~i~---pDiv~lsK 293 (474)
T PLN02624 220 EDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKH-NVLMIADEIQTGLARTGKML-AC-DWEEVR---PDVVILGK 293 (474)
T ss_pred hCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCcCcCcchh-hH-HhcCCC---CCEEEecc
Confidence 3577888999999999998877 499999999999 99999999998765444211 11 111111 12444799
Q ss_pred hcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc----C
Q 014172 303 AFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE----L 378 (429)
Q Consensus 303 ~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----l 378 (429)
.+|.+++++|++++++++++.+.......+++.+.+.+.++.++|+. .++ .++.+...++.+.+.+.|++ +
T Consensus 294 ~lggG~~pigav~~~~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~---l~~--~~l~~~~~~~~~~l~~~L~~l~~~~ 368 (474)
T PLN02624 294 ALGGGVIPVSAVLADKDVMLCIKPGEHGSTFGGNPLASAVAMAALQV---VQD--EKLAERSAKLGQELRDQLQKIQKQF 368 (474)
T ss_pred cccCCCCcceeeeecHHHHhHhccCCcCCCCCCCHHHHHHHHHHHHH---HHh--chHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99966699999999998888776554445557888999999998874 111 12233333344444444433 2
Q ss_pred CC-ceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 379 EG-VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 379 ~g-~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+. +..+.+.|.|+. +.+..... ......+++++|+++ ||.+
T Consensus 369 ~~~i~~vrg~G~~~~-i~l~~~~~-------~~~~a~~~~~~L~e~-GV~v 410 (474)
T PLN02624 369 PKLIKEVRGRGLLNA-VVLNSPKL-------GPVSAYDVCLKLKER-GLLA 410 (474)
T ss_pred CCceEEEEeeEEEEE-EEecCCCc-------ChHHHHHHHHHHHhC-CeEE
Confidence 32 444556666644 44432100 001356889887665 8876
No 241
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.83 E-value=4.4e-18 Score=169.18 Aligned_cols=265 Identities=19% Similarity=0.207 Sum_probs=189.8
Q ss_pred CHHHHHHHHHHHHhhcCCCCCCCcEEEecChH-HHHHHHHHHhcC---CCCEEEEcCCCCCChHHHHHHcCCEEEEecC-
Q 014172 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAK-QSILQAVLAVCS---PGDEVIIPAPFWVSYPEMARIADATPVILPT- 208 (429)
Q Consensus 134 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~-~al~~~l~~l~~---~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~- 208 (429)
...+.+.+.+.+.+..|.+ ..+..++++|+| .++.+++.++-. +||+|+++.-+|.+...++...|++++.+++
T Consensus 103 ~~~l~~~~e~~~~~~~G~~-~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~ 181 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLR-SIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETV 181 (444)
T ss_pred HHHHHHHHHHHHHHHcCCC-CCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeee
Confidence 4567777777777777743 124688888888 688777776642 5899999999999999999999999999996
Q ss_pred CCCCCCCCCHHHHHhhccc---CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccc
Q 014172 209 RISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (429)
Q Consensus 209 ~~~~~~~~d~e~l~~~l~~---~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~ 285 (429)
..+++|.+|++.|+++|++ +..++++.+|+ ||.+...+++++|+++|++| |+++|+|++|+... ..+.
T Consensus 182 ~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~-gI~lIvDaAyg~~~------~~~~ 252 (444)
T TIGR03531 182 LDGDELTTDVEDIERAIEEIGPDNILCVLSTTS--CFAPRSPDDIEEIAKICANY-DIPHIVNNAYGLQS------NKYM 252 (444)
T ss_pred ecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHc-CCEEEEECcCcCcC------hhhh
Confidence 2346789999999999986 45666777775 55545555699999999999 99999999998522 1111
Q ss_pred cC--CC-CCCc-eEEEeccChhcccccceeeEEEc-CHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHH
Q 014172 286 SL--PG-MWER-TLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 360 (429)
Q Consensus 286 ~~--~~-~~~~-~i~~~S~SK~~~~~G~R~G~v~~-~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~ 360 (429)
.+ .+ ..++ .+++.|++|.+.++|+ .|.+++ ++++++.+...... ...+.+.|.+...++.. +.++++++
T Consensus 253 ~~~~~g~~~Grad~vv~s~hK~l~~pg~-Gg~I~~~d~el~~~i~~~y~g--~~~~s~~~~~~~~ll~~---G~~g~~~l 326 (444)
T TIGR03531 253 ELINKAIKVGRVDAVVSSTDKNFMVPVG-GAIIYSFDENFIQEISKSYPG--RASASPSLDVLITLLSL---GSKGYLEL 326 (444)
T ss_pred hhhhccccccCCCeEEEeCccCCCCCCC-EEEEEECCHHHHHHHHHhccC--CCCChHHHHHHHHHHHh---CHHHHHHH
Confidence 11 00 0122 5778899999998887 344446 67888877664222 22456788888888877 57899999
Q ss_pred HHHHHHHHHHHHHHhccC---CCceeec-CCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHh
Q 014172 361 VKAFRERRDFLVKSFGEL---EGVKMSE-PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDK 423 (429)
Q Consensus 361 ~~~~~~~r~~l~~~L~~l---~g~~~~~-p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~ 423 (429)
.+++.++++++.+.|+++ -|.++.. |...+-+-+.+....+ .+...+...|..+
T Consensus 327 i~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~~---------~~~~~~g~~l~~~ 384 (444)
T TIGR03531 327 LKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLKG---------KDPTMLGSMLYSR 384 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEecccccc---------cCHHHHHHHHHhC
Confidence 999999999999999886 2556553 3444445555543211 2566777777654
No 242
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.83 E-value=2.2e-18 Score=173.04 Aligned_cols=294 Identities=13% Similarity=0.063 Sum_probs=181.5
Q ss_pred hcCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 92 QAGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 92 ~~g~~~i~L~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
..|+..||+..|.- .++- +|++.+++.+.+.+..+ +.......+.+..+++.+.+.... ...+.+++++++++++
T Consensus 30 ~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~-~~~~~~~~~~~~~la~~l~~~~p~-~~~~~v~f~~sGseA~ 107 (420)
T TIGR00700 30 VDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTH-TCFMVTPYEGYVALAEKLNRIAPG-SGPKKSVFFNSGAEAV 107 (420)
T ss_pred CCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccC-ccccccCChHHHHHHHHHHHhCCC-CCCCEEEEeCCcHHHH
Confidence 35788999988863 3333 78999999999876321 111112234455566666554321 1225899999999999
Q ss_pred HHHHHHhcC--CCCEEEEcCCCCCChHHHHHHc-CC-------------EEEEecCCCCC---------CCCCCHHHHHh
Q 014172 169 LQAVLAVCS--PGDEVIIPAPFWVSYPEMARIA-DA-------------TPVILPTRISE---------NFLLDPKVLES 223 (429)
Q Consensus 169 ~~~l~~l~~--~gd~Vlv~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~~---------~~~~d~e~l~~ 223 (429)
+.+++.... ....|+...-+|.+....+... |- .+..++..... .+.-+++.+++
T Consensus 108 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (420)
T TIGR00700 108 ENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARA 187 (420)
T ss_pred HHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHH
Confidence 998886532 2356888888888765433322 11 11222221000 00002456666
Q ss_pred hcc-----cCCcEEEEcCCCCCccCCCCHH-HHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEE
Q 014172 224 KLT-----EKSRLLILCSPSNPTGSVYPKN-LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTV 297 (429)
Q Consensus 224 ~l~-----~~~~~i~l~~p~NPtG~~~~~~-~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~ 297 (429)
.+. ++..+|++...+.-+|.+++.+ .+++|.++|++| |+++|+||+|.+|.+.+. ...+... +....+
T Consensus 188 ~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~-gillI~DEV~tg~gr~g~-~~a~~~~----~~~pDi 261 (420)
T TIGR00700 188 IFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREH-GIVFIADEVQTGFARTGA-MFACEHE----GPEPDL 261 (420)
T ss_pred HHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEEecccCCcccch-hHHHhhc----CCCCCE
Confidence 552 3455666655566688866555 599999999999 999999999999866553 2222222 122225
Q ss_pred eccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 014172 298 NGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 377 (429)
Q Consensus 298 ~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 377 (429)
.+|||.++ +|+|+||+++++++++.+.......+++.++++|.++.++|+.-. .+...+...+..+..++.+.+..+.
T Consensus 262 ~~lsK~l~-~G~pig~v~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~-~~~~~~~~~~~g~~l~~~L~~l~~~ 339 (420)
T TIGR00700 262 ITTAKSLA-DGLPLSGVTGRAEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIE-SEGLIERARQIGRLVTDRLTTLKAV 339 (420)
T ss_pred EEeecccc-CCcceEEEEecHHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHhh
Confidence 56999999 999999999999999888655555677789999999988776310 1222333333333334434333334
Q ss_pred CCCceeecCCceEEEEEec
Q 014172 378 LEGVKMSEPQGAFYLFIDF 396 (429)
Q Consensus 378 l~g~~~~~p~~~~~~~~~l 396 (429)
++.+..+++.| .++|+.+
T Consensus 340 ~~~~~~vrg~G-~~~~i~~ 357 (420)
T TIGR00700 340 DPRIGDVRGLG-AMIAVEL 357 (420)
T ss_pred CCCEEEeeccc-eEEEEEE
Confidence 55555566775 4467766
No 243
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.83 E-value=5.9e-18 Score=168.72 Aligned_cols=308 Identities=14% Similarity=0.127 Sum_probs=202.9
Q ss_pred hcCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 92 QAGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 92 ~~g~~~i~L~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
..|+..||+..|.. .++- +|.+.+++.+.+.+..+ ++. .-..+....+++.+.+..+ ..+.+++++++++++
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-~~~-~~~~~~~~~la~~L~~~~~---~~~~v~f~~sGseA~ 111 (408)
T PRK04612 37 DQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWH-TSN-VFYSAPPLKLAEELVTASR---FAEKVFLCNSGTEAN 111 (408)
T ss_pred CCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccc-ccc-ccCCHHHHHHHHHHHhhCC---CCCEEEEcCchHHHH
Confidence 35788999988863 3443 78999999998875322 222 1223455667777765432 126899999999999
Q ss_pred HHHHHHhcC--------CC-CEEEEcCCCCCChHHHHHH-cCCEEEE---ecCCCC---CCCCCCHHHHHhhcccCCcEE
Q 014172 169 LQAVLAVCS--------PG-DEVIIPAPFWVSYPEMARI-ADATPVI---LPTRIS---ENFLLDPKVLESKLTEKSRLL 232 (429)
Q Consensus 169 ~~~l~~l~~--------~g-d~Vlv~~p~y~~~~~~~~~-~g~~~~~---v~~~~~---~~~~~d~e~l~~~l~~~~~~i 232 (429)
+.+++.... ++ .+|+....+|.+....+.. .|..... -+..+. -.+ .|++.+++.+.++..+.
T Consensus 112 e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~~~~~~~aa 190 (408)
T PRK04612 112 EAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDF-NDVEALEAAMAGGDVAA 190 (408)
T ss_pred HHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCC-CCHHHHHHhhCCCCEEE
Confidence 999877531 12 4688888888876544332 2211100 011100 011 27899998887666777
Q ss_pred EEcCCCCCccCCCC--HHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccce
Q 014172 233 ILCSPSNPTGSVYP--KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWR 310 (429)
Q Consensus 233 ~l~~p~NPtG~~~~--~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R 310 (429)
++..|.+++|.+++ .+.+++|.++|++| ++++|+||+|.++.+.|.. +... ..+.+..+.+|||.++ +|+|
T Consensus 191 vi~eP~~~~gg~~~~~~~~l~~l~~l~~~~-g~llI~DEv~tg~gr~G~~---~a~~--~~~~~pdi~t~~K~l~-~G~p 263 (408)
T PRK04612 191 VMLEPIQGEGGVMPAAPGFLARVRALCDQH-DALLVLDEIQCGMGRTGTL---FAHW--QEQVTPDIVTLAKALG-GGFP 263 (408)
T ss_pred EEECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCCch---hhhh--hcCCCCCEEEEcchhc-CCCc
Confidence 88888888887766 56899999999999 9999999999986554421 1111 1345567889999999 8999
Q ss_pred eeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC----CCceeecC
Q 014172 311 LGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL----EGVKMSEP 386 (429)
Q Consensus 311 ~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l----~g~~~~~p 386 (429)
+||+++++++++.+.......+++.+++.+.++.+.|+. .++ .++.+..+++-+++.+.|+++ +-+..++.
T Consensus 264 iga~~~~~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~---~~~--~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg 338 (408)
T PRK04612 264 IGAMLAGPKVAETMQFGAHGTTFGGNPLAAAVARVALRK---LAS--PQIAANVARQSAALRAGLEALNAEFGVFAQVRG 338 (408)
T ss_pred eEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHH---HHh--ccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeec
Confidence 999999999888876555556667889999999998875 221 245555566666666666553 22334456
Q ss_pred CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 387 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.|-| +-+.+.... .....++++.|+++ ||.+
T Consensus 339 ~Gl~-~~i~~~~~~---------~~~a~~i~~~l~~~-Gvlv 369 (408)
T PRK04612 339 RGLM-LGAVLAPAH---------AGQAGAILDLAAEH-GLLL 369 (408)
T ss_pred cceE-EEEEecCch---------hhHHHHHHHHHHHC-CeEE
Confidence 6644 455553100 01356777777665 8875
No 244
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.82 E-value=1.1e-17 Score=164.71 Aligned_cols=320 Identities=13% Similarity=0.123 Sum_probs=209.0
Q ss_pred HHHHHHHHHhcCCCeEEcCCCCCC--CCC---hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCc
Q 014172 83 ITDQATALAQAGVSVIRLAAGEPD--FDT---PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQ 157 (429)
Q Consensus 83 ~~~~~~~~~~~g~~~i~L~~g~~~--~~~---p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~ 157 (429)
..++.+.+++.|.+...|...+-. +-+ ...+.+++...+.-+.-.|+.++...+|.+++++++. .+.
T Consensus 24 ~~~r~~~l~~ag~n~f~l~~~~v~IDLlSDS~T~aMs~~q~a~~~vGDd~Yagd~s~~~LE~~vAe~lG--------~e~ 95 (460)
T PRK13237 24 RAEREAAMKEAGYNTFLLRSEDVYIDLLTDSGTNAMSDRQWAGMMIGDEAYAGSRNFYHLEETVQEYYG--------FKH 95 (460)
T ss_pred HHHHHHHHHHcCCCcccCCcCcEEEECcccCCchhccHHHHHHHhhcchhhcCCCcHHHHHHHHHHHHC--------CCe
Confidence 345666677777777777666622 211 1445555444444455679888889999999999973 456
Q ss_pred EEEecChHHHHHHHHHHhcCCCCEEEEcCCCCC-ChHHHHHHcCCEEEEecCC--------CCCCCCCCHHHHHhhcccC
Q 014172 158 ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV-SYPEMARIADATPVILPTR--------ISENFLLDPKVLESKLTEK 228 (429)
Q Consensus 158 i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~-~~~~~~~~~g~~~~~v~~~--------~~~~~~~d~e~l~~~l~~~ 228 (429)
++.+++++.++.+++...++|||.| +..+|. .....+...|+..+.+..+ ...++.+|++.|+++++++
T Consensus 96 aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~ 173 (460)
T PRK13237 96 VVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEV 173 (460)
T ss_pred EEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhccc
Confidence 9999999999998777778999975 444344 4444478889866555321 1235779999999999753
Q ss_pred ----CcEEEEcCCCCCc-cCCCCHHHHHHHHHHHHhCCCeEEEEccCCccc----cc---CCCCCCcccc----CCCCCC
Q 014172 229 ----SRLLILCSPSNPT-GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI----IY---APATHTSFAS----LPGMWE 292 (429)
Q Consensus 229 ----~~~i~l~~p~NPt-G~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~----~~---~~~~~~~~~~----~~~~~~ 292 (429)
++++.+..++|.. |...|.+++++|.++|++| |+.||+|.+...- +- .+....++.. +. .-
T Consensus 174 ~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~-Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~--s~ 250 (460)
T PRK13237 174 GAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKH-GIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMF--SY 250 (460)
T ss_pred cCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHc-CCEEEEECcchhcChhhhcccccccCCCcHhHHhhhcc--Cc
Confidence 3456677788877 7999999999999999999 9999999997632 10 1111122211 11 12
Q ss_pred ceEEEeccChhcccccceeeEEEc-CHHHHHHHHHHhhccc-----CCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 014172 293 RTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFT-----SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRE 366 (429)
Q Consensus 293 ~~i~~~S~SK~~~~~G~R~G~v~~-~~~~~~~l~~~~~~~~-----~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~ 366 (429)
-.+.+.|++|.++.+ . .|++++ ++++.+.++...-.+. .+.+.-...++...|.+.. ..+++ +.--.
T Consensus 251 aD~~t~S~~K~~~~~-~-GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~-~~~y~----~~ri~ 323 (460)
T PRK13237 251 ADGCTMSGKKDCLVN-I-GGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESV-QYEYI----EHRVG 323 (460)
T ss_pred CcEEEEeCCCCCCCC-C-ceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhc-hHHHH----HHHHH
Confidence 236788899998744 1 377776 5678888776632221 1222223333333343311 12333 33334
Q ss_pred HHHHHHHHhccCCCceeecCCceEEEEEecCCcc-CCcccCCCCCCChHHHHHHHHHhCCee
Q 014172 367 RRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYY-GSEAEGFGKIENSESLCRYLLDKAQVL 427 (429)
Q Consensus 367 ~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~Ll~~~gV~ 427 (429)
..++|.+.|.+. |+.++.|.||.-+|++..... +.....| ....++..|..+.||-
T Consensus 324 ~~~~l~~~L~~~-Gvpv~~p~ggH~v~vda~~~lph~~~~~~----p~~al~~~ly~~~GiR 380 (460)
T PRK13237 324 QVRYLGEKLLAA-GVPIVEPVGGHAVFLDARRFLPHLPQDQF----PAQALAAELYIESGVR 380 (460)
T ss_pred HHHHHHHHHHHC-CCceecCCCceEEEEEhHHhCCCCCcccC----hHHHHHHHHHHHhCcC
Confidence 557788888776 999999999999999875531 1122233 6889999999998874
No 245
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.82 E-value=4.3e-18 Score=170.49 Aligned_cols=295 Identities=15% Similarity=0.104 Sum_probs=191.5
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcC---C--CCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREG---F--TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~---~--~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
++.+.|+.+.-. +.|+.+.+++.+.+... . ..+....+...+.+++.+ + +..| .++++|++|+|+|++++
T Consensus 26 ~~~iyld~~a~g-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g--~~~~~v~~~~~~t~~l~ 100 (406)
T TIGR01814 26 NAVIYLDGNSLG-LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVG--AKEDEVVVMNTLTINLH 100 (406)
T ss_pred CCcEEecCCCcC-cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccC--CCCCcEEEeCCchHHHH
Confidence 457999977655 34788888887765431 0 111101122233333333 2 4455 46889999999999999
Q ss_pred HHHHHhcCCC---CEEEEcCCCCCChHH----HHHHcCCEE----EEecCCCCCCCCCCHHHHHhhc---ccCCcEEEEc
Q 014172 170 QAVLAVCSPG---DEVIIPAPFWVSYPE----MARIADATP----VILPTRISENFLLDPKVLESKL---TEKSRLLILC 235 (429)
Q Consensus 170 ~~l~~l~~~g---d~Vlv~~p~y~~~~~----~~~~~g~~~----~~v~~~~~~~~~~d~e~l~~~l---~~~~~~i~l~ 235 (429)
.++..++++| +.|++....|++... .++..|+++ +.++.+ .++.+|++.+++.+ ++++++|+++
T Consensus 101 ~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~--~~g~~~~~~l~~~~~~~~~~t~lv~~~ 178 (406)
T TIGR01814 101 LLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPR--EEETLRLEDILDTIEKNGDDIAVILLS 178 (406)
T ss_pred HHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccC--CCCccCHHHHHHHHHhcCCCeEEEEEe
Confidence 9999887664 368888899987433 345678887 455543 34557999998877 3689999999
Q ss_pred CCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcc-cccceeeEE
Q 014172 236 SPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYI 314 (429)
Q Consensus 236 ~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~R~G~v 314 (429)
+++|.||.+++ +++|.++|+++ |+++++|++++. |..+..+.. .+..+++.|.+|+++ .+| |.+
T Consensus 179 ~v~~~tG~~~~---~~~i~~~~~~~-g~~~~vD~aq~~----G~~~id~~~----~gvD~~~~s~hK~l~g~pG---~~l 243 (406)
T TIGR01814 179 GVQYYTGQLFD---MAAITRAAHAK-GALVGFDLAHAV----GNVPLDLHD----WGVDFACWCTYKYLNAGPG---AGA 243 (406)
T ss_pred ccccccceecC---HHHHHHHHHHc-CCEEEEEccccc----CCccccccc----CCCCEEEEcCccccCCCCC---eEE
Confidence 99999999999 99999999999 999999999986 332223222 356699999999874 344 434
Q ss_pred EcCHHHHHHHHHH-hh----------------------cccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHH
Q 014172 315 AGPKHFVAACNKI-QS----------------------QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 371 (429)
Q Consensus 315 ~~~~~~~~~l~~~-~~----------------------~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l 371 (429)
+..++....+... .. ....+++.....++.++++.- .+..+++..++.++..+++
T Consensus 244 ~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~--~~~g~~~i~~~~~~l~~~l 321 (406)
T TIGR01814 244 FVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIF--DQAGMEALRKKSLLLTDYL 321 (406)
T ss_pred EEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHHH
Confidence 3332222222110 00 001234555555555566531 0223567778888888888
Q ss_pred HHHhccC----CCceeecCC-----ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 372 VKSFGEL----EGVKMSEPQ-----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 372 ~~~L~~l----~g~~~~~p~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+.|+++ +|+++..|. +++ +.+.++ . +..++.++|.++ ||.+
T Consensus 322 ~~~l~~~~~~~~~~~i~~~~~~~~r~~~-v~~~~~-~------------~~~~~~~~L~~~-gi~v 372 (406)
T TIGR01814 322 EELIKARCGGPPVLTIITPRDHAQRGCQ-LSLTHP-V------------PGKAVFQALIKR-GVIG 372 (406)
T ss_pred HHHHHhhcCCCCceEEeCCCChhhcCCe-EEEEec-C------------CHHHHHHHHHHC-CEEE
Confidence 8888774 357776542 233 555665 2 567888888655 8875
No 246
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.82 E-value=5e-18 Score=171.85 Aligned_cols=290 Identities=16% Similarity=0.102 Sum_probs=178.4
Q ss_pred cCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..||+..|.- .++- +|.+.+++.+.+++..+ .+......+....+++.+.+..+.. ..+.++++++++++.+
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-~~~~~~~~~~~~~la~~L~~~~p~~-~~~~v~f~~sGseA~e 129 (451)
T PRK06918 52 DGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIH-TGFNVMMYEPYIELAEKLAALAPGS-FDKKVLFLNSGAEAVE 129 (451)
T ss_pred CCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccC-ccccccccHHHHHHHHHHHHhCCCC-CCCEEEEcCCcHHHHH
Confidence 5788999988863 3343 78899999998876321 1111122455666777776554311 1158999999999999
Q ss_pred HHHHHhcC--CCCEEEEcCCCCCChHHHHHHc-CC-------------EEEEecCCCCC--CCCCC--------HHHHHh
Q 014172 170 QAVLAVCS--PGDEVIIPAPFWVSYPEMARIA-DA-------------TPVILPTRISE--NFLLD--------PKVLES 223 (429)
Q Consensus 170 ~~l~~l~~--~gd~Vlv~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~~--~~~~d--------~e~l~~ 223 (429)
.+++.... ....|+....+|++....+... |- .+..+|..... ..... .+.+++
T Consensus 130 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (451)
T PRK06918 130 NAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKN 209 (451)
T ss_pred HHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHH
Confidence 99887532 2256888888888765444332 21 12223321100 00011 122333
Q ss_pred hc----ccCCcEEEEcCCCCC-ccCCC-CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEE
Q 014172 224 KL----TEKSRLLILCSPSNP-TGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTV 297 (429)
Q Consensus 224 ~l----~~~~~~i~l~~p~NP-tG~~~-~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~ 297 (429)
.+ .++..+.+|..|-.. .|.++ +.+.+++|.++|++| |+++|+||+|.++.+.+. ..++..++...+ +
T Consensus 210 ~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~-gillI~DEV~tg~gr~g~-~~a~~~~~v~pD----i 283 (451)
T PRK06918 210 FFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEH-GILFVADEIQTGFARTGK-YFAIEHFDVVPD----L 283 (451)
T ss_pred HHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCcCccCc-eehhHhcCCCCC----E
Confidence 32 223344555566444 46645 455699999999999 999999999999876653 233333332122 5
Q ss_pred eccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 014172 298 NGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 377 (429)
Q Consensus 298 ~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 377 (429)
.||||.++ +|+|+||+++++++++.+.......+++.+.+++.++.++|+.-. ++.+ .+..++.++.+.++|++
T Consensus 284 ~t~sK~l~-~G~pig~v~~~~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~--~~~~---~~~~~~~g~~l~~~l~~ 357 (451)
T PRK06918 284 ITVSKSLG-AGVPISGVIGRKEIMDESAPGELGGTYAGSPLGCAAALAVLDIIE--KENL---NDRAIELGKVVMNRFEE 357 (451)
T ss_pred Eeeehhhc-CCCccEEEEEcHHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHH--HCCH---HHHHHHHHHHHHHHHHH
Confidence 58999999 999999999999999888655555677889999999888776310 1111 22222233333333332
Q ss_pred ----CCCceeecCCceEEEEEec
Q 014172 378 ----LEGVKMSEPQGAFYLFIDF 396 (429)
Q Consensus 378 ----l~g~~~~~p~~~~~~~~~l 396 (429)
.+.+..+.+.|+|+.|...
T Consensus 358 l~~~~~~~~~vrg~G~~~~~~~~ 380 (451)
T PRK06918 358 MKNKYNCIGDVRGLGAMCAFELV 380 (451)
T ss_pred HHhhCCCceeeccceeEEEEEEc
Confidence 3334445678888877654
No 247
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.82 E-value=1.4e-17 Score=166.68 Aligned_cols=301 Identities=16% Similarity=0.091 Sum_probs=182.3
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHH-HcCCCCCCCC---CC---CHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAI-REGFTRYTPN---AG---TLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~-~~~~~~Y~~~---~G---~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~a 167 (429)
.+.++|-..++.. +|.+.+++...+ .....+|+.+ .| ..+|.+...+.+++.+|. ...++.+++|+.+
T Consensus 28 ~~~~~l~~sen~~--~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~---~~alv~~~SG~~A 102 (416)
T PRK13034 28 QDHLELIASENFT--SPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGC---DYANVQPHSGSQA 102 (416)
T ss_pred hcCeeecccccCC--CHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCC---CceEEecCCcHHH
Confidence 4578888888774 788888888875 3211111111 12 334444111255555552 2333456788999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCCCh-HHHHHH--cCCEE--EEecCCCCCCCCCCHHHHHhhccc-CCcEEEEcCCCCCc
Q 014172 168 ILQAVLAVCSPGDEVIIPAPFWVSY-PEMARI--ADATP--VILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPT 241 (429)
Q Consensus 168 l~~~l~~l~~~gd~Vlv~~p~y~~~-~~~~~~--~g~~~--~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~p~NPt 241 (429)
+..++.+++++||+|+++..+|.+. ...++. .+... +.++++.. ++.+|++++++.+.. ++|+|++.++. +
T Consensus 103 ~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~~~le~~l~~~~~klVi~~~~~--~ 179 (416)
T PRK13034 103 NGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRL-TGLIDYDEVEELAKEHKPKLIIAGFSA--Y 179 (416)
T ss_pred HHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccc-cCCcCHHHHHHHHhhcCCeEEEECCCc--c
Confidence 9999999999999999999998772 222222 12222 34544332 456899999998853 67888776654 4
Q ss_pred cCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHH-
Q 014172 242 GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF- 320 (429)
Q Consensus 242 G~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~- 320 (429)
|...+ +++|.++|++| |+++|+|++++...+.... ....+ ....++++|++|.++ |...|+++++++.
T Consensus 180 g~~~d---l~~l~~la~~~-g~~livD~Aha~G~~~~g~--~~~~~---~~~Di~~~s~~K~l~--g~~GG~v~~~~~~~ 248 (416)
T PRK13034 180 PRELD---FARFREIADEV-GALLMVDMAHIAGLVAAGE--HPNPF---PHAHVVTTTTHKTLR--GPRGGMILTNDEEI 248 (416)
T ss_pred ccccC---HHHHHHHHHHc-CCEEEEeCcccccCcccCC--CCCCC---CCceEEEEeCcccCC--CCCCeEEEECcHHH
Confidence 67777 88899999999 9999999999875543211 11111 235589999999993 2234888776544
Q ss_pred HHHHHHHhhcc-cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC-CceEEEEEecCC
Q 014172 321 VAACNKIQSQF-TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP-QGAFYLFIDFST 398 (429)
Q Consensus 321 ~~~l~~~~~~~-~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p-~~~~~~~~~l~~ 398 (429)
.+.++...... ..++......++..++... .+....+.+++..++.+++.+.|.++ |+.+..+ ..+..+++.+..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~--~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~~~~~~t~i~~v~~~~ 325 (416)
T PRK13034 249 AKKINSAVFPGLQGGPLMHVIAAKAVAFGEA--LQPEFKTYAKQVIANAQALAEVLKER-GYDLVSGGTDNHLLLVDLRP 325 (416)
T ss_pred HHHHHhhcCCcccCCccHHHHHHHHHHHHHH--hChhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCCCCCcEEEEEcCC
Confidence 44444322211 1122233333333233220 11223456788889999999999988 8887642 223336666653
Q ss_pred ccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 399 YYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
. + .+...+.++| ++.||.+
T Consensus 326 ~-~---------~~~~~~~~~L-~~~GI~v 344 (416)
T PRK13034 326 K-G---------LSGKDAEQAL-ERAGITV 344 (416)
T ss_pred C-C---------CCHHHHHHHH-HhCCcEE
Confidence 2 0 1344455555 5558876
No 248
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=4.3e-18 Score=170.69 Aligned_cols=214 Identities=14% Similarity=0.136 Sum_probs=154.2
Q ss_pred CHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChH----HHHHHcCCEEEEecCC
Q 014172 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVILPTR 209 (429)
Q Consensus 134 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~ 209 (429)
..+|++.++++. | .+..++++++++++.+++.+++++||+|+++.+.|.+.. ..+...|++++.++.
T Consensus 65 ~~~le~~lA~l~----g----~~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~- 135 (427)
T PRK05994 65 NAVLEERVAALE----G----GTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA- 135 (427)
T ss_pred HHHHHHHHHHHh----C----CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC-
Confidence 456777777765 3 235788899999999999999999999999999998643 346778999999875
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCC
Q 014172 210 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 289 (429)
Q Consensus 210 ~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~ 289 (429)
.|++.+++++++++++|++++|+||||.+++ +++|.++|++| ++++|+|++|.... ...++
T Consensus 136 ------~d~~~l~~ai~~~tklV~vesp~NptG~v~d---l~~I~~la~~~-gi~livD~a~a~~~----~~~pl----- 196 (427)
T PRK05994 136 ------DDPASFERAITPRTKAIFIESIANPGGTVTD---IAAIAEVAHRA-GLPLIVDNTLASPY----LIRPI----- 196 (427)
T ss_pred ------CCHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCccccc----cCCcc-----
Confidence 2789999999999999999999999999999 89999999999 99999999997421 11111
Q ss_pred CCCceEEEeccChhcccccceeeEEEcC-HH-----------------------HHHHHH----------HHhhcccCCC
Q 014172 290 MWERTLTVNGFSKAFAMTGWRLGYIAGP-KH-----------------------FVAACN----------KIQSQFTSGA 335 (429)
Q Consensus 290 ~~~~~i~~~S~SK~~~~~G~R~G~v~~~-~~-----------------------~~~~l~----------~~~~~~~~~~ 335 (429)
..+..+++.|++|.+|-+|-.+|.+++. .. +.+.+. ......+...
T Consensus 197 ~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 276 (427)
T PRK05994 197 EHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAI 276 (427)
T ss_pred ccCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCC
Confidence 1345599999999998667666765542 10 111100 1122223334
Q ss_pred chHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCce
Q 014172 336 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK 382 (429)
Q Consensus 336 ~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~ 382 (429)
+.+....+..-| +.+..+.++..++...+.+.|++.|+++
T Consensus 277 ~~~~A~l~~~~l-------~tL~~r~~~~~~~a~~la~~L~~~p~v~ 316 (427)
T PRK05994 277 SPFNAFLILTGI-------ETLPLRMQRHSDNALAVAEWLKGHPKVS 316 (427)
T ss_pred CHHHHHHHHcCc-------ccHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 444433333222 3466677777788888889998887754
No 249
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.81 E-value=2.5e-17 Score=165.83 Aligned_cols=317 Identities=12% Similarity=0.117 Sum_probs=193.8
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 92 ~~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
..|+..||+..|. ..++- +|.+.+++.+.+.+.. .+.......+.+..+|+.+.+..+. ..+.|++++++++++
T Consensus 38 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~-~~~~~~~~~~~~~~la~~L~~~~p~--~~~~v~f~~sGsEAv 114 (443)
T PRK08360 38 IEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLI-HYTPIYGFPVEPLLLAEKLIEIAPG--DNPKVSFGLSGSDAN 114 (443)
T ss_pred CCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhcc-CccccccCcHHHHHHHHHHHHhCCC--CCCEEEEcCCHHHHH
Confidence 3578899998885 44444 7899999999987532 2222222345666777777655432 225899999999999
Q ss_pred HHHHHHhcC-CC-CEEEEcCCCCCChHHH-HHHcCC------------EEEEecCCCCC--CCC--------CCHHHHHh
Q 014172 169 LQAVLAVCS-PG-DEVIIPAPFWVSYPEM-ARIADA------------TPVILPTRISE--NFL--------LDPKVLES 223 (429)
Q Consensus 169 ~~~l~~l~~-~g-d~Vlv~~p~y~~~~~~-~~~~g~------------~~~~v~~~~~~--~~~--------~d~e~l~~ 223 (429)
+.+++.... .| ..|+...-+|.+.... ....|. .+..+|..... .+. .+++.+++
T Consensus 115 e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (443)
T PRK08360 115 DGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKE 194 (443)
T ss_pred HHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHH
Confidence 999887532 23 5688877777775422 222221 12223321100 000 12345555
Q ss_pred hcc-----cCCcEEEEcCCCCCccCCCC-HHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEE
Q 014172 224 KLT-----EKSRLLILCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTV 297 (429)
Q Consensus 224 ~l~-----~~~~~i~l~~p~NPtG~~~~-~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~ 297 (429)
.+. +++++|++...+||+|.+++ .+.+++|.++|++| |+++|+||+|.++.+.|.. .....+. ..+. +
T Consensus 195 ~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~-g~llI~DEv~~g~gr~G~~-~a~~~~~-~~pD---i 268 (443)
T PRK08360 195 KFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEH-GILLVVDEVQSGLGRTGKW-FAIEHFG-VEPD---I 268 (443)
T ss_pred HHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCccc-hhhhhcC-CCCC---E
Confidence 553 45777777655799999887 55799999999999 9999999999987665532 1211121 1122 3
Q ss_pred eccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 014172 298 NGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 377 (429)
Q Consensus 298 ~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 377 (429)
.+|||.++ +|+|+||+++++++++.+.......+.+.+.+.+.++.++|+. .++ +++.+..+++-+++.+.|++
T Consensus 269 itlsK~l~-~G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~---l~~--~~l~~~~~~~g~~l~~~L~~ 342 (443)
T PRK08360 269 ITLGKPLG-GGLPISATIGRAEIMDSLPPLAHAFTLSGNPVASAAALAVIEE---IEE--KNLLKRAEKLGNYTKKRLEE 342 (443)
T ss_pred EEeccccc-CCceeEEEEEcHHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHH---HHH--cCHHHHHHHHHHHHHHHHHH
Confidence 36899999 9999999999999998887554555667788889999888875 111 12333334444444444433
Q ss_pred ----CCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 378 ----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 378 ----l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+-+..+++.|-+ +-+.+....... . ........++.+|+++ ||.+
T Consensus 343 l~~~~~~v~~vrg~Gl~-~gie~~~~~~~~-~--~~~~~~~~~~~~l~~~-Gi~~ 392 (443)
T PRK08360 343 MKKKHELIGDVRGIGLM-IGVDLVKDRETK-E--RAYEEAAKVVWRAWEL-GLIV 392 (443)
T ss_pred HHHhCCCeeeeeccceE-EEEEEecCCccc-C--ccHHHHHHHHHHHHHC-CeEE
Confidence 3334444555544 444442100000 0 0001235678887766 8875
No 250
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.81 E-value=6.5e-18 Score=169.17 Aligned_cols=156 Identities=13% Similarity=0.158 Sum_probs=127.3
Q ss_pred CCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHH----HHcCCEEEEecC
Q 014172 133 GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPT 208 (429)
Q Consensus 133 G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~ 208 (429)
-..+|++.+|++.+ .+..++|+++++++.+++.+++++||+|+++...|.+....+ ...|+++++++.
T Consensus 65 ~~~~le~~lA~l~g--------~~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 136 (433)
T PRK08134 65 TVAVLEERVAALEG--------GVGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKP 136 (433)
T ss_pred HHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECC
Confidence 35678888887753 234788999999999999999999999999999998765443 458999999986
Q ss_pred CCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCC
Q 014172 209 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 288 (429)
Q Consensus 209 ~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~ 288 (429)
+ |++++++++++++|+|++.+|+||+|.+.+ +++|+++|++| ++++|+|.++..... ..++ .
T Consensus 137 ~-------d~~~l~~~i~~~TklV~~e~~~np~g~v~D---i~~I~~la~~~-gi~livD~t~a~~~~----~~pl-~-- 198 (433)
T PRK08134 137 G-------DIDGWRAAIRPNTRLLFGETLGNPGLEVLD---IPTVAAIAHEA-GVPLLVDSTFTTPYL----LRPF-E-- 198 (433)
T ss_pred C-------CHHHHHHhcCCCCeEEEEECCCcccCcccC---HHHHHHHHHHc-CCEEEEECCCccccc----CCch-h--
Confidence 2 799999999999999999999999999999 99999999999 999999999864211 1121 1
Q ss_pred CCCCceEEEeccChhcccccceeeEEEc
Q 014172 289 GMWERTLTVNGFSKAFAMTGWRLGYIAG 316 (429)
Q Consensus 289 ~~~~~~i~~~S~SK~~~~~G~R~G~v~~ 316 (429)
.+..+++.|.+|.++-+|-.+|.++.
T Consensus 199 --~GaD~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 199 --HGADLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred --cCCCEEEeccccccCCCCCceEEEEE
Confidence 35569999999999877776777654
No 251
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.80 E-value=1.9e-17 Score=162.95 Aligned_cols=215 Identities=12% Similarity=0.121 Sum_probs=164.1
Q ss_pred CHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH----HHHcCCEEEEecCC
Q 014172 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADATPVILPTR 209 (429)
Q Consensus 134 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~v~~~ 209 (429)
...|.+.+|+.- ..+..+++++++.++..++.+++++||+|+++...|.+.... ++..|+++..++.
T Consensus 64 ~~~le~~la~LE--------g~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~- 134 (395)
T PRK08114 64 HFSLQEAMCELE--------GGAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP- 134 (395)
T ss_pred HHHHHHHHHHHh--------CCCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC-
Confidence 456666666642 245788888899999999999999999999999888776654 4567999999874
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhC-CCeEEEEccCCcccccCCCCCCccccCC
Q 014172 210 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH-PRLLVLSDEIYEHIIYAPATHTSFASLP 288 (429)
Q Consensus 210 ~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~-~~i~vi~Deay~~~~~~~~~~~~~~~~~ 288 (429)
.|.+.+++++++++|+|++.+|.||+|.+.+ +++|+++|+++ +++++++|.++.-... ....
T Consensus 135 ------~d~~~l~~~l~~~TrlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~~-----~~pl--- 197 (395)
T PRK08114 135 ------LIGADIAKLIQPNTKVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGVL-----FKAL--- 197 (395)
T ss_pred ------CCHHHHHHhcCCCceEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCccccc-----cCHH---
Confidence 3789999999999999999999999999999 99999999998 1499999999974211 1111
Q ss_pred CCCCceEEEeccChhccccc-ceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 014172 289 GMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 367 (429)
Q Consensus 289 ~~~~~~i~~~S~SK~~~~~G-~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~ 367 (429)
..+..+++.|.+|.++-+| .-.|.++.++++.+.+.......+.+.+++....+..-| +-+.-+.++..++
T Consensus 198 -~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl-------~TL~lR~~~~~~n 269 (395)
T PRK08114 198 -DFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENSYLMGQMVDADTAYMTSRGL-------RTLGVRLRQHEES 269 (395)
T ss_pred -HcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHHHhccCCCCHHHHHHHHcCC-------CcHHHHHHHHHHH
Confidence 2456699999999886454 677877888877776765555556566666654443333 3356677778888
Q ss_pred HHHHHHHhccCCCce
Q 014172 368 RDFLVKSFGELEGVK 382 (429)
Q Consensus 368 r~~l~~~L~~l~g~~ 382 (429)
...+.+.|++.|.++
T Consensus 270 a~~va~~L~~hp~V~ 284 (395)
T PRK08114 270 SLKVAEWLAEHPEVA 284 (395)
T ss_pred HHHHHHHHHcCCCEe
Confidence 888999999877654
No 252
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.80 E-value=6.1e-18 Score=162.45 Aligned_cols=204 Identities=18% Similarity=0.212 Sum_probs=163.9
Q ss_pred hcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcC----CCC-CCC--CCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecCh
Q 014172 92 QAGVSVIRLAAGEPDFDTPVLIAEAGINAIREG----FTR-YTP--NAGTLELRSAICHKLKEENGLSYTPDQILVSNGA 164 (429)
Q Consensus 92 ~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~----~~~-Y~~--~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~ 164 (429)
..|.+.+.|+.+.-. +.++.|++++.+.+... +.. |+. ..+..+.|+.+|++++ .++.+|++|+|+
T Consensus 39 ~~~~~~vyld~~at~-p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklIn------Ad~~dIiFts~A 111 (428)
T KOG1549|consen 39 HHGTRPVYLDNQATG-PMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLIN------ADPSDIVFTSGA 111 (428)
T ss_pred cCCCccEEEecCcCC-CCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhC------CCCCcEEEeCCc
Confidence 355678888877744 34788888888876542 222 332 2236788999999986 578789999999
Q ss_pred HHHHHHHHHHhc-CCCC----EEEEcCCCCCChHHHH---HHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcC
Q 014172 165 KQSILQAVLAVC-SPGD----EVIIPAPFWVSYPEMA---RIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS 236 (429)
Q Consensus 165 ~~al~~~l~~l~-~~gd----~Vlv~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~ 236 (429)
|++++++++.+. ..+| .|++..-.|+.....+ +..|++++++|+. +++.+|.+.+++.++++|+++.|.+
T Consensus 112 TEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~--~~~~~d~~~~~~~i~~~T~lv~I~~ 189 (428)
T KOG1549|consen 112 TESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE--DSGLVDISKLREAIRSKTRLVSIMH 189 (428)
T ss_pred hHHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC--ccccccHHHHHHhcCCCceEEEEEe
Confidence 999999999984 3566 8999888888876554 4569999999997 4456899999999999999999999
Q ss_pred CCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEc
Q 014172 237 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG 316 (429)
Q Consensus 237 p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~ 316 (429)
.+|.+|+++| +++|+++|+++ ++.+++|.+++- |..+..+..+ +..+...|.+|+||.+| +|++++
T Consensus 190 Vnn~~gv~~P---v~EI~~icr~~-~v~v~~DaAQav----G~i~vDV~el----n~D~~s~s~HK~ygp~~--iGaLYv 255 (428)
T KOG1549|consen 190 VNNEIGVLQP---VKEIVKICREE-GVQVHVDAAQAV----GKIPVDVQEL----NADFLSISAHKIYGPPG--IGALYV 255 (428)
T ss_pred cccCcccccc---HHHHHHHhCcC-CcEEEeehhhhc----CCccccHHHc----CchheeeecccccCCCc--ceEEEE
Confidence 9999999999 99999999999 999999999986 5555555555 33478889999999888 899988
Q ss_pred CH
Q 014172 317 PK 318 (429)
Q Consensus 317 ~~ 318 (429)
.+
T Consensus 256 r~ 257 (428)
T KOG1549|consen 256 RR 257 (428)
T ss_pred cc
Confidence 75
No 253
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.79 E-value=7.2e-17 Score=155.64 Aligned_cols=287 Identities=19% Similarity=0.215 Sum_probs=213.4
Q ss_pred CCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcC
Q 014172 107 FDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPA 186 (429)
Q Consensus 107 ~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~ 186 (429)
.+.++.+++++.+... .+.++ -..++.+.+.+.+...++.. +.+-++++.+++.+++.++..+++|||+||+..
T Consensus 14 ~~v~~~V~~am~~~~~---~h~s~--~F~~~~~~~~~~L~~v~~t~-~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~ 87 (383)
T COG0075 14 VPVPPRVLLAMARPMV---GHRSP--DFVGIMKEVLEKLRKVFGTE-NGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVV 87 (383)
T ss_pred CCCCHHHHHHhcCCCC---CCCCH--HHHHHHHHHHHHHHHHhcCC-CCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEe
Confidence 4457888888776432 23433 34566667777777777743 235567778899999999999999999999999
Q ss_pred CCCCCh--HHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc--cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCC
Q 014172 187 PFWVSY--PEMARIADATPVILPTRISENFLLDPKVLESKLT--EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR 262 (429)
Q Consensus 187 p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~--~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~ 262 (429)
....+. .++++.+|++++.+... .+..+|+++++++++ ++.++|.+++.--+||+..| +++|+++|++| +
T Consensus 88 nG~FG~R~~~ia~~~g~~v~~~~~~--wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnp---l~~I~~~~k~~-g 161 (383)
T COG0075 88 NGKFGERFAEIAERYGAEVVVLEVE--WGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNP---LKEIAKAAKEH-G 161 (383)
T ss_pred CChHHHHHHHHHHHhCCceEEEeCC--CCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCc---HHHHHHHHHHc-C
Confidence 877764 47999999999999875 345689999999998 35778888888889999999 99999999999 9
Q ss_pred eEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHh--------------
Q 014172 263 LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ-------------- 328 (429)
Q Consensus 263 i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~-------------- 328 (429)
.++|+|.+-+. ++ ....+ +.|+.++++.+--|.++. -..+|++..+++..+.+....
T Consensus 162 ~l~iVDaVsS~---Gg-~~~~v----d~wgiDv~itgSQK~l~~-PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~ 232 (383)
T COG0075 162 ALLIVDAVSSL---GG-EPLKV----DEWGIDVAITGSQKALGA-PPGLAFVAVSERALEAIEERKHPSFYLDLKKWLKY 232 (383)
T ss_pred CEEEEEecccC---CC-cccch----hhcCccEEEecCchhccC-CCccceeEECHHHHHHHhcCCCCceeecHHHHHHH
Confidence 99999998764 22 22222 236777999999999973 344899998887766654221
Q ss_pred ----hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCC---ceEEEEEecCCccC
Q 014172 329 ----SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ---GAFYLFIDFSTYYG 401 (429)
Q Consensus 329 ----~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~---~~~~~~~~l~~~~~ 401 (429)
..+.++++....++...+|+.- .++.+++..++++++.+.++++++.+ |++..... ..--..+.+|..
T Consensus 233 ~~~~~~~p~Tppv~~i~aL~~al~~i--~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta~~~P~g-- 307 (383)
T COG0075 233 MEKKGSTPYTPPVNLIYALREALDLI--LEEGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTAIKVPEG-- 307 (383)
T ss_pred HhhcCCCCCCCCHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEEEECCCC--
Confidence 2344556777777778888752 25668999999999999999999999 88876511 222244666653
Q ss_pred CcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 402 SEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+..++...+++++||.+
T Consensus 308 ---------~~~~~~~~~~~~~~g~~i 325 (383)
T COG0075 308 ---------VDDKKVRRALLKEYGVEI 325 (383)
T ss_pred ---------CCcHHHHHHHHHhCCEEe
Confidence 244455558899989876
No 254
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=2.3e-17 Score=165.12 Aligned_cols=215 Identities=10% Similarity=0.078 Sum_probs=154.1
Q ss_pred CHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH----HHHHcCCEEEEecCC
Q 014172 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVILPTR 209 (429)
Q Consensus 134 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~~~ 209 (429)
...|++.++++. | .+..+++++|+.++..++.+++++||+|+++...|.+... .+...|++++.++ +
T Consensus 71 ~~~Le~~lA~l~----g----~~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d 141 (436)
T PRK07812 71 QDVVEQRIAALE----G----GVAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-D 141 (436)
T ss_pred HHHHHHHHHHHh----C----CCeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-C
Confidence 456777777664 3 2457888888889999999999999999999988877553 3345788888885 2
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCC
Q 014172 210 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 289 (429)
Q Consensus 210 ~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~ 289 (429)
. .|++.+++++++++++|++.+|+||+|.+.+ +++|.++|++| |+++|+|+++..... ..++
T Consensus 142 ~-----~d~e~l~~ai~~~tklV~ie~~sNp~G~v~D---l~~I~~la~~~-gi~liVD~t~a~~~~----~~pl----- 203 (436)
T PRK07812 142 P-----DDLDAWRAAVRPNTKAFFAETISNPQIDVLD---IPGVAEVAHEA-GVPLIVDNTIATPYL----IRPL----- 203 (436)
T ss_pred C-----CCHHHHHHhCCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCCccccc----CCch-----
Confidence 1 2899999999999999999999999999999 99999999999 999999999864211 1111
Q ss_pred CCCceEEEeccChhcccccceeeEEEcCHH-------------------------------HHHHHH-HHhhcccCCCch
Q 014172 290 MWERTLTVNGFSKAFAMTGWRLGYIAGPKH-------------------------------FVAACN-KIQSQFTSGASS 337 (429)
Q Consensus 290 ~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~-------------------------------~~~~l~-~~~~~~~~~~~~ 337 (429)
..+..+++.|++|.+|-.|--+|+++.... ++..+. ......+.+.+.
T Consensus 204 ~~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p 283 (436)
T PRK07812 204 EHGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISP 283 (436)
T ss_pred hcCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCH
Confidence 134558899999999877766777665311 010111 222334444555
Q ss_pred HHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCce
Q 014172 338 ISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK 382 (429)
Q Consensus 338 ~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~ 382 (429)
+....+..- -+-+..+.++..++...+.+.|++.|+++
T Consensus 284 ~~a~l~~rg-------l~tL~~R~~~~~~nA~~la~~L~~~p~v~ 321 (436)
T PRK07812 284 FNAFLIAQG-------LETLSLRIERHVANAQRVAEFLEARDEVA 321 (436)
T ss_pred HHHHHHhcC-------cCcHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 543333222 23366677777888888999999887764
No 255
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.79 E-value=3.6e-17 Score=162.93 Aligned_cols=306 Identities=15% Similarity=0.095 Sum_probs=202.0
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCC------CC-CCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGF------TR-YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~------~~-Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~a 167 (429)
++.|+|-..++.. ++.+.+++...+.+.+ .+ |+......++.....++..+.||.. .-+|-.-+|+. +
T Consensus 49 ~~~l~LiasEN~~--s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~--~anvqp~Sg~~-A 123 (493)
T PRK13580 49 RSSLKLIASENYS--SLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAE--HAYVQPHSGAD-A 123 (493)
T ss_pred hcCceEecccccC--CHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCC--cccccCCCcHH-H
Confidence 4579998888773 5667777666554321 12 3333445667777778888888843 34665555555 5
Q ss_pred HHHHHHHhcCC-------------------------------CCEEEEcCCCCCChHHH---HHHcC--CEEEEecCCCC
Q 014172 168 ILQAVLAVCSP-------------------------------GDEVIIPAPFWVSYPEM---ARIAD--ATPVILPTRIS 211 (429)
Q Consensus 168 l~~~l~~l~~~-------------------------------gd~Vlv~~p~y~~~~~~---~~~~g--~~~~~v~~~~~ 211 (429)
...++.++++| ||+|+..++...++... ....| .+++.++++.+
T Consensus 124 n~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~ 203 (493)
T PRK13580 124 NLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPD 203 (493)
T ss_pred HHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcc
Confidence 56688888876 89999887766544221 12222 56666777643
Q ss_pred CCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCC
Q 014172 212 ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 291 (429)
Q Consensus 212 ~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~ 291 (429)
+..+|++++++.++++++.|++++.+|- |...| +++|.++|+++ |+++++|++|....+++..... ......
T Consensus 204 -~g~iD~d~l~~~~~~~~plvii~g~S~~-~~~~d---l~~i~eia~~~-gA~L~VD~AH~~Gligg~~~~~--~~~~~~ 275 (493)
T PRK13580 204 -TGLLDYDEIAALAREFKPLILVAGYSAY-PRRVN---FAKLREIADEV-GAVLMVDMAHFAGLVAGKVFTG--DEDPVP 275 (493)
T ss_pred -cCccCHHHHHHHHhhcCCEEEEeCcccc-CCCcC---HHHHHHHHHHc-CCEEEEECchhhceeccccchh--hcCCCC
Confidence 3569999999999999899999888886 55778 99999999999 9999999999976665432210 010112
Q ss_pred CceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHH
Q 014172 292 ERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 371 (429)
Q Consensus 292 ~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l 371 (429)
+..|+++|++|++ .|.+.|++++++++++.+........+++..+...++..++..- ........++++.++.+.|
T Consensus 276 ~~D~vtgT~hKaL--~GP~GG~I~~~~~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e~--~~~ef~~y~~~l~~Na~~L 351 (493)
T PRK13580 276 HADIVTTTTHKTL--RGPRGGLVLAKKEYADAVDKGCPLVLGGPLPHVMAAKAVALAEA--RTPEFQKYAQQVVDNARAL 351 (493)
T ss_pred CCcEEEeCChhhc--cCCCeEEEEecHHHHHHHhhCCCcccCCCccHHHHHHHHHHHHH--hCccHHHHHHHHHHHHHHH
Confidence 4558999999998 34556999999999888865443333344444444444444431 1122356788889999999
Q ss_pred HHHhccCCCceeec-CCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 372 VKSFGELEGVKMSE-PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 372 ~~~L~~l~g~~~~~-p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
.+.|.+. |+.+.. ...+..+++++.+. ......+.+.|++.||.|+
T Consensus 352 a~~L~~~-G~~vv~ggTdshIV~V~lg~~-----------~~~g~~a~~~L~e~GI~vn 398 (493)
T PRK13580 352 AEGFLKR-GARLVTGGTDNHLVLIDVTSF-----------GLTGRQAESALLDAGIVTN 398 (493)
T ss_pred HHHHHhc-CCCccCCCCCCCEEEEEeCCH-----------HHHHHHHHHHHHHCCeEEc
Confidence 9999988 887752 22345578888643 1133345545556699874
No 256
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.78 E-value=6e-18 Score=147.73 Aligned_cols=165 Identities=23% Similarity=0.224 Sum_probs=132.0
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChH-HHHHHcCCEEEEecCCCCCC
Q 014172 135 LELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP-EMARIADATPVILPTRISEN 213 (429)
Q Consensus 135 ~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~-~~~~~~g~~~~~v~~~~~~~ 213 (429)
.++++.++++++ .+.+++++++|+++++.+++++++++|++|+++++.|.+.. ..++..|++++.++.+..+.
T Consensus 3 ~~~~~~l~~~~~------~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 76 (170)
T cd01494 3 EELEEKLARLLQ------PGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGY 76 (170)
T ss_pred HHHHHHHHHHcC------CCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCc
Confidence 577888888863 35678999999999999999999988999999999999988 88899999999999865443
Q ss_pred CCCCHHHHHhhc-ccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCC
Q 014172 214 FLLDPKVLESKL-TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 292 (429)
Q Consensus 214 ~~~d~e~l~~~l-~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~ 292 (429)
...+.+.+++.. .++++++++++++||+|..++ .++|.++|+++ |+++|+|++|..+...... .... ..+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~---~~~l~~~~~~~-~~~li~D~a~~~~~~~~~~----~~~~-~~~ 147 (170)
T cd01494 77 GGLDVAILEELKAKPNVALIVITPNTTSGGVLVP---LKEIRKIAKEY-GILLLVDAASAGGASPAPG----VLIP-EGG 147 (170)
T ss_pred cchhhhhhhhccccCceEEEEEecCcCCCCeEcC---HHHHHHHHHHc-CCEEEEecccccccccccc----cccc-ccc
Confidence 333334554443 467899999999999999999 68899999999 9999999999986654311 1111 134
Q ss_pred ceEEEeccChhcccccceeeEEEc
Q 014172 293 RTLTVNGFSKAFAMTGWRLGYIAG 316 (429)
Q Consensus 293 ~~i~~~S~SK~~~~~G~R~G~v~~ 316 (429)
.++++.|++|.++. .++||+++
T Consensus 148 ~d~~~~s~~K~~~~--~~~G~l~~ 169 (170)
T cd01494 148 ADVVTFSLHKNLGG--EGGGVVIV 169 (170)
T ss_pred CCEEEEEcccccCC--CceEEEEe
Confidence 66899999999973 78999875
No 257
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.78 E-value=2.1e-17 Score=154.78 Aligned_cols=332 Identities=15% Similarity=0.209 Sum_probs=224.3
Q ss_pred cccccccCcccccccCCchhHHHHHHHHHHHh----------cCCCeEEcCCCC--CCCCChHHHHHHHHHHHHcCCCC-
Q 014172 61 EVQVDVSLSPRVNAVKPSKTVAITDQATALAQ----------AGVSVIRLAAGE--PDFDTPVLIAEAGINAIREGFTR- 127 (429)
Q Consensus 61 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~----------~g~~~i~L~~g~--~~~~~p~~v~~a~~~~~~~~~~~- 127 (429)
.+.+|..+.+.+.+-+....++.+...+++.. .-.+.+..+..+ .....+|++++++.+.+++.-.+
T Consensus 126 ~F~Yd~ff~~~i~kKk~DhsYRvFk~vNRlA~~fP~A~~~se~t~k~VtVWCSNDYLgms~Hp~V~~A~~~tl~~hG~GA 205 (570)
T KOG1360|consen 126 TFDYDRFFREEIDKKKRDHSYRVFKNVNRLAKEFPLAHRYSEATEKKVTVWCSNDYLGMSRHPEVLDAMHDTLDRHGAGA 205 (570)
T ss_pred cccHHHHHHHHHHhhhccchhHHHHHHhHhhhhccchhhccccccCceEEEecCccccccCChHHHHHHHHHHHHcCCCc
Confidence 34466666666666555544444433333222 111334444333 34455899999999998752111
Q ss_pred ------CCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCC
Q 014172 128 ------YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 201 (429)
Q Consensus 128 ------Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~ 201 (429)
-+.+.-..+|.+.+|++.++...+ --..+++.+-++ ++.+.+. -||-+|....-.+.+..+.++..++
T Consensus 206 GGTRNIsG~s~~hv~LE~eLA~LHqK~aAL--lFsSCfVANDst--LftLak~--lpgcei~SD~gNHASMI~GIrns~v 279 (570)
T KOG1360|consen 206 GGTRNISGHSKHHVRLEAELADLHQKEAAL--LFSSCFVANDST--LFTLAKK--LPGCEIFSDEGNHASMIQGIRNSRV 279 (570)
T ss_pred CCccccCCCCchhhhHHHHHHHHhcCccee--eeeeeeeccchH--HHHHHHH--CCCcEEeccccchHHHHHHhhhcCC
Confidence 112233467888888887532111 011333444443 3322232 3888999888889899999999998
Q ss_pred EEEEecCCCCCCCCCCHHHHHhhccc----CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccC
Q 014172 202 TPVILPTRISENFLLDPKVLESKLTE----KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA 277 (429)
Q Consensus 202 ~~~~v~~~~~~~~~~d~e~l~~~l~~----~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~ 277 (429)
.-..+.. | |++.|++++.. .+|.|-+.+.+..+|.+.| +++|++++++| |.+-+.||++.-..|+
T Consensus 280 ~K~IFrH----N---D~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcp---leelcDvah~y-GAiTFlDEVHAVGlYG 348 (570)
T KOG1360|consen 280 PKHIFRH----N---DLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCP---LEELCDVAHKY-GAITFLDEVHAVGLYG 348 (570)
T ss_pred cceeecc----C---CHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCC---HHHHHHHHHHh-Cceeeeehhhhhcccc
Confidence 7766664 2 88888888753 5788889999999999999 99999999999 9999999999988888
Q ss_pred CCCCCccccCCC-CCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccC--CCchHHHHHHHHHHhcCCCCh
Q 014172 278 PATHTSFASLPG-MWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS--GASSISQKAGVAALGLGYAGG 354 (429)
Q Consensus 278 ~~~~~~~~~~~~-~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~--~~~~~~q~aa~~~l~~~~~~~ 354 (429)
+.+.. +.+-++ +....|+.+++.|+||.-| ||+.+..++++.++.+...+.+ +.++.....+..+.+... .
T Consensus 349 ~rGaG-vgerdGvm~kvDiIsGTLgKafGcVG---GYIAat~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk--~ 422 (570)
T KOG1360|consen 349 PRGAG-VGERDGVMHKVDIISGTLGKAFGCVG---GYIAATRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILK--S 422 (570)
T ss_pred CCCCC-ccccCCcchhhhhcccchhhhccccc---ceehhhhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHh--h
Confidence 65432 222222 3445689999999999777 9999999999999988655544 345555555665555311 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 355 EVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 355 ~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.-..++...+++..++.+.|.++ |+.+.+..+ ..+-+.+.+. .-+.+.++.|+.++||+|
T Consensus 423 ~eg~~lR~~hqrnv~~~kq~l~~~-GiPVi~~pS-HIiPv~vgda-----------~l~~~~sd~Li~~h~iYv 483 (570)
T KOG1360|consen 423 EEGRVLRRQHQRNVKYVKQLLMEL-GIPVIPNPS-HIIPVRVGDA-----------ALAKQASDILISKHNIYV 483 (570)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHc-CCcccCCCc-ceeeeeccCH-----------HHHHHHHHHHHHhcCeEE
Confidence 222456777788889999999998 888874444 4477777543 246789999999999986
No 258
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.78 E-value=1.3e-16 Score=161.64 Aligned_cols=302 Identities=13% Similarity=0.090 Sum_probs=190.1
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCC-CCCCC---CCC---HHHHHHHHHHHHhhcCCCCCCCcEEEe---cCh
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFT-RYTPN---AGT---LELRSAICHKLKEENGLSYTPDQILVS---NGA 164 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~-~Y~~~---~G~---~~lr~~ia~~l~~~~g~~~~~~~i~~t---~G~ 164 (429)
++.|+|-..++. .++.+++++...+.+.+. .++.. .|. ..+.+...+...+.+| .+++++.++ +|+
T Consensus 34 ~~~l~l~~sen~--~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~--a~~~~~~~~~~~~sg 109 (452)
T PTZ00094 34 IEGLELIASENF--TSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFG--LDPEEWGVNVQPYSG 109 (452)
T ss_pred HcCeeEeccccc--CCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhC--CCcccceeecCCCch
Confidence 457999999887 457788888887754321 12111 121 2222222334444556 355667666 788
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHH----------cCCEEEEecCCCCCCCCCCHHHHHhhccc-CCcEEE
Q 014172 165 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI----------ADATPVILPTRISENFLLDPKVLESKLTE-KSRLLI 233 (429)
Q Consensus 165 ~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~----------~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~ 233 (429)
++++..++.+++++||.|++....|.++...... .+.+++.++++. ++.+|++++++.++. ++++++
T Consensus 110 t~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~--~g~id~~~L~~~l~~~~~~lvi 187 (452)
T PTZ00094 110 SPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNE--KGLIDYDKLEELAKAFRPKLII 187 (452)
T ss_pred HHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCC--CCCcCHHHHHHHHHHhCCCEEE
Confidence 8999998999999999999988777766543211 113344555543 356899999999954 677766
Q ss_pred EcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeE
Q 014172 234 LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY 313 (429)
Q Consensus 234 l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~ 313 (429)
+. ++.+|...| +++|.++|+++ |+++++|+++..........+ .+. .+..+++.|++|++ .|.+.|+
T Consensus 188 ~~--~s~~g~~~d---i~~I~~i~~~~-ga~l~vDaaq~~G~i~~~~~~----~~~-~~~D~l~~S~hK~l--~GP~Gg~ 254 (452)
T PTZ00094 188 AG--ASAYPRDID---YKRFREICDSV-GAYLMADIAHTSGLVAAGVLP----SPF-PYADVVTTTTHKSL--RGPRSGL 254 (452)
T ss_pred Ee--CCCCCCccC---HHHHHHHHHHc-CCEEEEeccchhccccCCCCC----CCC-CCCcEEEcCCccCC--CCCCceE
Confidence 53 345999999 88999999999 999999999987544322111 111 14558999999987 3444588
Q ss_pred EEcCHHHHHHHHHHh-----hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCc
Q 014172 314 IAGPKHFVAACNKIQ-----SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG 388 (429)
Q Consensus 314 v~~~~~~~~~l~~~~-----~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~ 388 (429)
+++++++.+.+.... ..+..+++.....++.++++.- .....+...++..++++++.+.|.+. |+++..+..
T Consensus 255 l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~--~~~~~~~~~~~i~~l~~~l~~~L~~~-g~~v~~~~~ 331 (452)
T PTZ00094 255 IFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEV--QSPEWKEYAKQVLKNAKALAAALEKR-GYDLVTGGT 331 (452)
T ss_pred EEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHH--hChhHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCC
Confidence 887766544333221 1112234555555555666541 12345677888899999999999886 887764221
Q ss_pred -eEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 389 -AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 389 -~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
.....+.+... + .+..++...| ++.||.++
T Consensus 332 ~~~~~~v~~~~~-~---------~~~~~~~~~L-~~~gI~vs 362 (452)
T PTZ00094 332 DNHLVLVDLRPF-G---------ITGSKMEKLL-DAVNISVN 362 (452)
T ss_pred CCceEeecCCcC-C---------CCHHHHHHHH-HHCCcEEe
Confidence 22244444321 0 2455566555 77799873
No 259
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.78 E-value=3.2e-17 Score=153.71 Aligned_cols=265 Identities=19% Similarity=0.218 Sum_probs=180.3
Q ss_pred CCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcC
Q 014172 107 FDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPA 186 (429)
Q Consensus 107 ~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~ 186 (429)
-.+.+++.+++.++-..+...|+.++ ..+++.+++++.+| ...+++++++|++..+++.+.++||+.|++..
T Consensus 10 ~g~~~~m~eam~~a~~~~~~~YG~D~----~~~~~e~~~ae~~g----~~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~~ 81 (342)
T COG2008 10 AGPTPEMREALAAANAVGDDVYGEDP----TTNALEQRIAELFG----KEAALFVPSGTQANQLALAAHCQPGESVICHE 81 (342)
T ss_pred CCCCHHHHHHHHhccccCCCCCCCCH----HHHHHHHHHHHHhC----CceEEEecCccHHHHHHHHHhcCCCCeEEEec
Confidence 34578999999887433455676554 45555555554444 27899999999999999999999999999999
Q ss_pred CCCCChHH--HHHHcC-CEEEEecCCCCCCCCCCHHHHHhhccc------CCcEEEEcCCCCCccCCCCHHHHHHHHHHH
Q 014172 187 PFWVSYPE--MARIAD-ATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIV 257 (429)
Q Consensus 187 p~y~~~~~--~~~~~g-~~~~~v~~~~~~~~~~d~e~l~~~l~~------~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a 257 (429)
-+|....+ ..+.++ +.. ++..+..+..+++|+|+..+.+ .+.++++.+.+|-.|+++|.+++++|.++|
T Consensus 82 ~aHi~~~E~Ga~~~~~~~~~--~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~ 159 (342)
T COG2008 82 TAHIYTDECGAPEFFGGGQK--LPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVC 159 (342)
T ss_pred cccceecccCcHHHHcCCce--eccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHH
Confidence 88765443 233332 332 3333345567999999997763 345566555555789999999999999999
Q ss_pred HhCCCeEEEEccC--CcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEE-EcCHHHHHHHHHHhhcccCC
Q 014172 258 AKHPRLLVLSDEI--YEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYI-AGPKHFVAACNKIQSQFTSG 334 (429)
Q Consensus 258 ~~~~~i~vi~Dea--y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v-~~~~~~~~~l~~~~~~~~~~ 334 (429)
++| ++.+..|.+ |..++..+ ++...+.. ..+++..++||..+.++ |.+ +++.++++.+..++......
T Consensus 160 k~~-~l~LHmDGAR~~nA~valg---~~~~~~~~--~~D~v~~~~tK~g~~~~---gAiv~gn~~~~~~a~~~rK~~Ggl 230 (342)
T COG2008 160 KEH-GLPLHMDGARLANALVALG---VALKTIKS--YVDSVSFCLTKGGGAPV---GAIVFGNRDFAKRARRWRKRAGGL 230 (342)
T ss_pred HHh-CCceeechHHHHHHHHHcC---CCHHHHHh--hCCEEEEecccCCccee---eeEEEcCHHHHHHHHHHHHHhccc
Confidence 999 999999988 33333333 23333322 33367778999987555 665 57999999998887666554
Q ss_pred CchHHHHH--HHHHHhcCCCChHHHHHHHHHHHHH--HHHHHHHhccCCCceeecC-CceEEEEEecCC
Q 014172 335 ASSISQKA--GVAALGLGYAGGEVVSKMVKAFRER--RDFLVKSFGELEGVKMSEP-QGAFYLFIDFST 398 (429)
Q Consensus 335 ~~~~~q~a--a~~~l~~~~~~~~~~~~~~~~~~~~--r~~l~~~L~~l~g~~~~~p-~~~~~~~~~l~~ 398 (429)
.+.....+ ...+|++ .-|+ . .....+ ...|.+.|.+.+|+++..| +.++ +|++++.
T Consensus 231 ~~k~r~laA~~~~~l~~----~~~~--~-~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~-vf~~l~~ 291 (342)
T COG2008 231 MRKARFLAAQGLYALED----DVWR--L-AADHANAMAARLAEGLEAKPGVKLAFPVETNM-VFVRLPE 291 (342)
T ss_pred HhhhhHHHHHHHHHHhc----cHHH--H-HHHHHHHHHHHHHHhhhhcCCceeccCCcccE-EEEECCh
Confidence 44433333 3344443 2222 2 222334 7778889987789998765 5555 8999985
No 260
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.78 E-value=1.6e-16 Score=159.21 Aligned_cols=315 Identities=13% Similarity=0.122 Sum_probs=192.9
Q ss_pred hcCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 92 QAGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 92 ~~g~~~i~L~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
..|+..||+..|.. .++- +|.+.+++.+.+.+..+ +.......+....+++.+.+..+.. ..+.+++++++++++
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~-~~~~~~~~~~~~~la~~l~~~~p~~-~~~~v~f~~SGseA~ 114 (425)
T PRK07495 37 KEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTH-TCHQVVPYENYVRLAERLNALVPGD-FAKKTIFVTTGAEAV 114 (425)
T ss_pred CCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccC-cccCccCCHHHHHHHHHHHHhCCCC-CCCEEEECCchHHHH
Confidence 35788999988863 3343 78899999998875321 1111122345555666666543311 125899999999999
Q ss_pred HHHHHHhcC-C-CCEEEEcCCCCCChHHHHHH-cCC-------------EEEEecCCCCCCCCCC----HHHHHhhcc--
Q 014172 169 LQAVLAVCS-P-GDEVIIPAPFWVSYPEMARI-ADA-------------TPVILPTRISENFLLD----PKVLESKLT-- 226 (429)
Q Consensus 169 ~~~l~~l~~-~-gd~Vlv~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~~~~~~d----~e~l~~~l~-- 226 (429)
..+++.... . ...|+...-+|.+....... .|. .++.+|.+... ...+ ++.+++.+.
T Consensus 115 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~l~~~~~~~ 193 (425)
T PRK07495 115 ENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVEL-HGVSVEQSLAALDKLFKAD 193 (425)
T ss_pred HHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccc-ccccHHHHHHHHHHHHHhc
Confidence 998886532 2 36788888888876433222 111 22334432211 1122 445566653
Q ss_pred ---cCCcEEEEcCC-CCCcc-CCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccC
Q 014172 227 ---EKSRLLILCSP-SNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFS 301 (429)
Q Consensus 227 ---~~~~~i~l~~p-~NPtG-~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 301 (429)
.+..+|++... +| +| .++|.+.+++|.++|++| |+++|+||+|.++.+.|.. ..+.. .+.+..+.+||
T Consensus 194 ~~~~~iaavi~EPv~g~-~G~~~~~~~~l~~l~~l~~~~-g~llI~DEv~tG~gr~G~~-~a~~~----~gv~pDi~tls 266 (425)
T PRK07495 194 VDPQRVAAIIIEPVQGE-GGFYPAPAAFMKALRELCDQH-GILLIADEVQTGFARTGKL-FAMEH----HEVAADLTTMA 266 (425)
T ss_pred cCCCceEEEEECCccCC-CCCccCCHHHHHHHHHHHHHc-CCEEEEechhhcCCcCCCc-eeecc----cCCCCCEEeeh
Confidence 24566666333 45 78 557999999999999999 9999999999987554431 11111 23445588999
Q ss_pred hhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc----
Q 014172 302 KAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE---- 377 (429)
Q Consensus 302 K~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~---- 377 (429)
|.++ +|+++||+++++++++.+.......+++.++++++++.++++. .++ .++.+..+++.+++.+.|++
T Consensus 267 K~l~-~G~pigav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~---l~~--~~l~~~~~~~g~~l~~~L~~l~~~ 340 (425)
T PRK07495 267 KGLA-GGFPLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDV---IEE--EDLCERANQLGNRLKQRLASLRET 340 (425)
T ss_pred hhhc-CCccceEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHH---HHh--chHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999 8999999999999988876544456677899999988777764 111 12333444444444444443
Q ss_pred CCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 378 LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 378 l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+|.+.-+... |+++|+.+...... . ........+.+.++++ ||.+
T Consensus 341 ~~~i~~vrG~-Gl~~~iel~~~~~~--~--~~~~~~~~~~~~~~~~-Gvl~ 385 (425)
T PRK07495 341 VPEIADIRGP-GFMNAVEFNDADSG--L--PSAEFANRVRLKALEK-GLIL 385 (425)
T ss_pred CCCeeeeecC-ceEEEEEEecCCCC--C--ccHHHHHHHHHHHHHC-CeEE
Confidence 3433323333 67799988431000 0 0000134567666665 8765
No 261
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.77 E-value=1.5e-16 Score=158.79 Aligned_cols=300 Identities=12% Similarity=0.090 Sum_probs=201.5
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEE--EecChHHHHHHHHHHhcC--------CC
Q 014172 110 PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQIL--VSNGAKQSILQAVLAVCS--------PG 179 (429)
Q Consensus 110 p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~--~t~G~~~al~~~l~~l~~--------~g 179 (429)
.+++.+.+...+.....++.......++.+.+.+++.+.+|.+-..+++. +|+|+|+++..++.+... .|
T Consensus 54 ~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g 133 (431)
T TIGR01788 54 EPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAG 133 (431)
T ss_pred CHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 46688888888865444444444456888888888888888531113454 489999999988866431 12
Q ss_pred -----CEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHH
Q 014172 180 -----DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 254 (429)
Q Consensus 180 -----d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~ 254 (429)
-.|+++.-.|.+....++..|++++.+|+++ +++.+|++.|++++++++.+|+++..+|.||.+.| +++|+
T Consensus 134 ~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~-~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idp---i~~I~ 209 (431)
T TIGR01788 134 KPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDP-GRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYED---VKALN 209 (431)
T ss_pred CCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCC-CceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCC---HHHHH
Confidence 3699999999999999999999999999975 34579999999999999999999999999999999 89999
Q ss_pred HHHHhCC-----CeEEEEccCCccccc---CCCCCCccccCCCCCCceEEEeccChhc-ccccceeeEEEcCHH--HHHH
Q 014172 255 RIVAKHP-----RLLVLSDEIYEHIIY---APATHTSFASLPGMWERTLTVNGFSKAF-AMTGWRLGYIAGPKH--FVAA 323 (429)
Q Consensus 255 ~~a~~~~-----~i~vi~Deay~~~~~---~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~R~G~v~~~~~--~~~~ 323 (429)
++|++++ ++++++|.+|+.+.. .+.....+. ..+...+..|.+|.+ +..| +|+++..+. +.+.
T Consensus 210 ~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~----~~~~DSis~s~HK~~~~P~g--~G~l~~r~~~~l~~~ 283 (431)
T TIGR01788 210 DALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR----LPRVKSINVSGHKYGLVYPG--VGWVIWRDEEALPEE 283 (431)
T ss_pred HHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC----CCCceEEEECchhccCCCCC--cEEEEEeChHHcchh
Confidence 9999873 699999999995431 122222221 124446788899976 5444 788876543 2232
Q ss_pred HHH---Hhh----cccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC--CceEEEEE
Q 014172 324 CNK---IQS----QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP--QGAFYLFI 394 (429)
Q Consensus 324 l~~---~~~----~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p--~~~~~~~~ 394 (429)
+.. +.. ..+...+...-.++..++.....+.+.++++.++..++.+++.+.|++++++++..| ..+. +.+
T Consensus 284 ~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~i-V~F 362 (431)
T TIGR01788 284 LIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPL-VAF 362 (431)
T ss_pred heecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceE-EEE
Confidence 211 000 011111222211222222211123567888888889999999999999988988754 5555 445
Q ss_pred ecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 395 DFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 395 ~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++... + ....+..++.++|.++ |+.+
T Consensus 363 r~~~~-~------~~~~~~~~l~~~L~~~-G~~~ 388 (431)
T TIGR01788 363 KLKDD-A------DPGYTLYDLSHRLRER-GWIV 388 (431)
T ss_pred EeCCC-C------CCCcCHHHHHHHHHHC-CCcc
Confidence 65421 0 0012567888887665 7753
No 262
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.76 E-value=1.5e-16 Score=152.08 Aligned_cols=300 Identities=18% Similarity=0.218 Sum_probs=203.3
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 92 ~~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
.+|+..|||..|. +.++- +|.+.+++.+..++-++ .++.-..+.+.++++.|.+..+ ..+.|+++|+++|++
T Consensus 39 ~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h--~sn~~~~~~~~~la~~L~~~s~---~~d~vff~NSGaEA~ 113 (404)
T COG4992 39 QQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWH--VSNLFYNEPQAELAEKLVELSP---FADRVFFCNSGAEAN 113 (404)
T ss_pred CCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhh--cccccCChHHHHHHHHHHhhCc---cccEEEEcCCcHHHH
Confidence 4788999999887 44544 79999999987765211 1111224566667777765432 368999999999999
Q ss_pred HHHHHHhcC----CC-CEEEEcCCCCCChHHHHHHcCCE-------------EEEecCCCCCCCCCCHHHHHhhcccCCc
Q 014172 169 LQAVLAVCS----PG-DEVIIPAPFWVSYPEMARIADAT-------------PVILPTRISENFLLDPKVLESKLTEKSR 230 (429)
Q Consensus 169 ~~~l~~l~~----~g-d~Vlv~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~~~d~e~l~~~l~~~~~ 230 (429)
+.++....+ ++ .+|+....+|++-...+-..+.+ ++.+|. + |++.++++++++|.
T Consensus 114 EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpf------n-Di~al~~ai~~~ta 186 (404)
T COG4992 114 EAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPF------N-DIEALEAAIDEDTA 186 (404)
T ss_pred HHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCC------C-CHHHHHHHhccCeE
Confidence 999887532 22 37888888887644333333322 223332 2 89999999999999
Q ss_pred EEEEcCCCCCccCCCCH-HHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccc
Q 014172 231 LLILCSPSNPTGSVYPK-NLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGW 309 (429)
Q Consensus 231 ~i~l~~p~NPtG~~~~~-~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~ 309 (429)
+|++..-+--.|...+. +.++++.++|++| |+++|.||++.++-..|.-. ..... +..--+.++.|.+| .|.
T Consensus 187 AvivEPIQGEgGV~~~~~~fl~~lr~lCd~~-g~LLI~DEVQtG~GRTGk~f-A~e~~----gV~PDI~tlaK~Lg-GG~ 259 (404)
T COG4992 187 AVIVEPIQGEGGVIPAPPEFLKALRELCDEH-GALLILDEVQTGLGRTGKLF-AYEHY----GVEPDILTLAKALG-GGF 259 (404)
T ss_pred EEEEecccCCCCCCCCCHHHHHHHHHHHHHh-CeEEEEeccccCCCccchHH-HHHHh----CCCCCEEEeecccc-CCc
Confidence 99988888888876654 4699999999999 99999999999876555321 11111 11112667899999 999
Q ss_pred eeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC----CCceeec
Q 014172 310 RLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL----EGVKMSE 385 (429)
Q Consensus 310 R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l----~g~~~~~ 385 (429)
.+|.+++.+.+.+.+..-....+++-++++.+++.++|+.-. + +.+.+..++.-+++.++|.++ +-++-++
T Consensus 260 PigA~la~~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~--~---e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vR 334 (404)
T COG4992 260 PIGAMLATEEIASAFTPGDHGSTFGGNPLACAVALAVLEVLL--E---EGLLENVREKGEYLLQRLRELKRRYPLVKEVR 334 (404)
T ss_pred cceeeEEchhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHc--c---hhHHHHHHHHHHHHHHHHHHHhhcCCceeeee
Confidence 999999986666666655566778889999999999887521 1 234444455555666666554 2133333
Q ss_pred CCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 386 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 386 p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
..| +.+=+.+... ....++++.|.++ ||.+
T Consensus 335 G~G-LmiGiel~~~-----------~~a~~~~~~~~~~-gvL~ 364 (404)
T COG4992 335 GRG-LMIGIELKEP-----------YRARDIVRALREE-GVLV 364 (404)
T ss_pred cce-eEEEEEecCc-----------ccHHHHHHHHHHC-CeEE
Confidence 444 4455666431 1367888888777 7775
No 263
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.76 E-value=3.3e-16 Score=156.69 Aligned_cols=312 Identities=13% Similarity=0.090 Sum_probs=186.2
Q ss_pred hcCCCeEEcCCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCC-CCcEEE-ecChHH
Q 014172 92 QAGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYT-PDQILV-SNGAKQ 166 (429)
Q Consensus 92 ~~g~~~i~L~~g~~~--~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~-~~~i~~-t~G~~~ 166 (429)
..|+..||+..|... ++- +|.+.+++.+.+.+..... ......+.+..+++.+.+....+.. .+.+++ ++++++
T Consensus 32 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~-~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGse 110 (412)
T TIGR02407 32 EDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIH-SLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTN 110 (412)
T ss_pred CCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhcccee-ccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCchH
Confidence 357889999888633 343 7999999999886421111 1112245666677776653210101 124655 589999
Q ss_pred HHHHHHHHhcC-CC-CEEEEcCCCCCChHHHHHH-cCC------------EEEEecCCCCCC-CCCCHHHHHhhcc----
Q 014172 167 SILQAVLAVCS-PG-DEVIIPAPFWVSYPEMARI-ADA------------TPVILPTRISEN-FLLDPKVLESKLT---- 226 (429)
Q Consensus 167 al~~~l~~l~~-~g-d~Vlv~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~-~~~d~e~l~~~l~---- 226 (429)
++..+++.... .| .+|+....+|++....+.. .|. .++.+|...... ..-+++.+++.+.
T Consensus 111 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~ 190 (412)
T TIGR02407 111 AVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSS 190 (412)
T ss_pred HHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccC
Confidence 99988887642 23 6788888888876644332 221 223333321000 0014677787775
Q ss_pred --cCCcEEEEcCCCCCccC-CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCC-CccccCCCCCCceEEEeccCh
Q 014172 227 --EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMWERTLTVNGFSK 302 (429)
Q Consensus 227 --~~~~~i~l~~p~NPtG~-~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~-~~~~~~~~~~~~~i~~~S~SK 302 (429)
+++.+|++...+++.|. +.+.+.+++|.++|++| |+++|+||++.+|...|... .....+. .| +.+|+|
T Consensus 191 ~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEV~tG~GRtG~~~a~~~~~v~--PD----i~~~~K 263 (412)
T TIGR02407 191 GVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRH-DILLIVDDIQAGCGRTGTFFSFEPAGIE--PD----IVCLSK 263 (412)
T ss_pred CCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCccchhHHhcccCCC--CC----EEEech
Confidence 24566776666888998 67888999999999999 99999999998753333211 0111221 22 446899
Q ss_pred hcccc-cceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCCh---HHHHHHHHHHHHHHHHHHHHhccC
Q 014172 303 AFAMT-GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGG---EVVSKMVKAFRERRDFLVKSFGEL 378 (429)
Q Consensus 303 ~~~~~-G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~---~~~~~~~~~~~~~r~~l~~~L~~l 378 (429)
.++ + |+|+||+++++++ +.+.......+++.+.++..++.+.++.-.... +++.++.+.++++.+.+. +.+
T Consensus 264 ~lg-~~G~pigav~~~~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~~l~~l~---~~~ 338 (412)
T TIGR02407 264 SIS-GYGLPLALTLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDRIV---AEY 338 (412)
T ss_pred hcc-CCccceeEEEEchhh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH---hhC
Confidence 998 7 9999999998876 544333334455667777666666665200011 122222223333222222 223
Q ss_pred CCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 379 EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 379 ~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+++.+.....|+++|+.++.. ....++...|+++ ||.+
T Consensus 339 ~~~~~~vrg~Gl~~~l~l~~~-----------~~~~~~~~~~~~~-Gv~v 376 (412)
T TIGR02407 339 PELIKQVRGRGLMQGIECGDG-----------DLAGKIAKAAFEN-GLII 376 (412)
T ss_pred CCceEeeecceeEEEEEecCh-----------HHHHHHHHHHHHC-CCEE
Confidence 333344456678899999742 1356788888766 8876
No 264
>PRK02769 histidine decarboxylase; Provisional
Probab=99.76 E-value=9.7e-16 Score=150.98 Aligned_cols=249 Identities=13% Similarity=0.130 Sum_probs=178.1
Q ss_pred CHHHHHHHHHHHHhhcCCCCCCCc--EEEecChHHHHHHHHHHh--cCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCC
Q 014172 134 TLELRSAICHKLKEENGLSYTPDQ--ILVSNGAKQSILQAVLAV--CSPGDEVIIPAPFWVSYPEMARIADATPVILPTR 209 (429)
Q Consensus 134 ~~~lr~~ia~~l~~~~g~~~~~~~--i~~t~G~~~al~~~l~~l--~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~ 209 (429)
..++.+.+.+++.+.+|. ++++ .++|+|+|+++..++... ..++++|++++-.|++....++..|.+.+.|+++
T Consensus 63 ~~~~e~~~~~~~a~l~g~--~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~ 140 (380)
T PRK02769 63 SFDFERDVMNFFAELFKI--PFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSL 140 (380)
T ss_pred hHHHHHHHHHHHHHHhCC--CCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccC
Confidence 567787888888888884 3344 489999999987666554 2578899999999999999999999999899886
Q ss_pred CCCCCCCCHHHHHhhcccC---CcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCC---eEEEEccCCcccccCCCCCCc
Q 014172 210 ISENFLLDPKVLESKLTEK---SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR---LLVLSDEIYEHIIYAPATHTS 283 (429)
Q Consensus 210 ~~~~~~~d~e~l~~~l~~~---~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~---i~vi~Deay~~~~~~~~~~~~ 283 (429)
+ ++.+|++.|+++++++ +.+|+++.++|+||.+.| +++|+++|++| + +++++|.+|+.+...-.....
T Consensus 141 ~--~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp---i~~I~~i~~~~-g~~~~~lHVDaA~gg~~~p~~~~~~ 214 (380)
T PRK02769 141 P--NGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDN---IKEIQEILKKI-GIDDYYIHADAALSGMILPFVNNPP 214 (380)
T ss_pred C--CCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHh-CCCceEEEEEecccceeecccCccc
Confidence 4 4569999999999875 888899999999999999 99999999999 7 799999999874321000000
Q ss_pred cccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhh-------cccCCCchHHHHHHHHHHhcCCCChHH
Q 014172 284 FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS-------QFTSGASSISQKAGVAALGLGYAGGEV 356 (429)
Q Consensus 284 ~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~-------~~~~~~~~~~q~aa~~~l~~~~~~~~~ 356 (429)
.++...+...+..|.+|.++ ....+|.++..++..+.+..... ....+.+.....++.++|.. .+.+.
T Consensus 215 --~~d~~~~vDsis~s~HK~~~-~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~--lg~~G 289 (380)
T PRK02769 215 --PFSFADGIDSIAISGHKFIG-SPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRS--LGSKG 289 (380)
T ss_pred --cCCccCCCCEEEECCcccCC-CCCCcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHH--HCHHH
Confidence 11111245578889999887 34568999888776665421111 11122233444444455543 14567
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCceee-cCCceEEEEEecC
Q 014172 357 VSKMVKAFRERRDFLVKSFGELEGVKMS-EPQGAFYLFIDFS 397 (429)
Q Consensus 357 ~~~~~~~~~~~r~~l~~~L~~l~g~~~~-~p~~~~~~~~~l~ 397 (429)
+++..++..+..+++.+.|++. |++.. .|.... +.++.|
T Consensus 290 ~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~~~~-v~f~~~ 329 (380)
T PRK02769 290 LRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPNSIT-VVFPCP 329 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCceE-EEEcCC
Confidence 8888888999999999999886 77655 455443 444433
No 265
>PLN02271 serine hydroxymethyltransferase
Probab=99.75 E-value=1.5e-15 Score=152.01 Aligned_cols=304 Identities=16% Similarity=0.093 Sum_probs=201.6
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCC------CC-CCCCCCCHHHHHHHHHHHHhhcCCCCCC--CcEEEecChH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGF------TR-YTPNAGTLELRSAICHKLKEENGLSYTP--DQILVSNGAK 165 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~------~~-Y~~~~G~~~lr~~ia~~l~~~~g~~~~~--~~i~~t~G~~ 165 (429)
..-|+|-..++. +.+.+.+++...+.+.+ .+ |+......++.....++..+.+|.+... -||-.- +++
T Consensus 148 ~~~l~LIASEN~--~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~-SGs 224 (586)
T PLN02271 148 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPY-SCT 224 (586)
T ss_pred hcCeeecccccc--CCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeec-cHH
Confidence 456888777776 34666666665554321 12 2223334566666667777778854332 355555 556
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCCChHHHH---------HHcCCEEEEec--CCCCCCCCCCHHHHHh-hcccCCcEEE
Q 014172 166 QSILQAVLAVCSPGDEVIIPAPFWVSYPEMA---------RIADATPVILP--TRISENFLLDPKVLES-KLTEKSRLLI 233 (429)
Q Consensus 166 ~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~---------~~~g~~~~~v~--~~~~~~~~~d~e~l~~-~l~~~~~~i~ 233 (429)
.+...++.++++|||+|+..+..|.++.... ...|..+..++ +++ .++.+|.+++++ +...++|+|+
T Consensus 225 ~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~-~~g~IDyd~lek~a~~~rPKLII 303 (586)
T PLN02271 225 SANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNP-QTGYIDYDKLEEKALDFRPKILI 303 (586)
T ss_pred HHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEccccc-ccCccCHHHHHHHhhhcCCeEEE
Confidence 6677789999999999999888777765432 34565555555 543 345699999998 6677999999
Q ss_pred EcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeE
Q 014172 234 LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY 313 (429)
Q Consensus 234 l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~ 313 (429)
+..-.|| ..++ +++|.++|+++ ++++++|.++......+..+++.. ....++.+|.+|++ .|.|.|.
T Consensus 304 ~g~Sayp--r~~D---~~~i~eIAdev-GA~LmvD~AH~aGLIa~g~~~sP~-----~~aDvvt~TTHKtL--rGPrGG~ 370 (586)
T PLN02271 304 CGGSSYP--REWD---YARFRQIADKC-GAVLMCDMAHISGLVAAKECVNPF-----DYCDIVTSTTHKSL--RGPRGGI 370 (586)
T ss_pred ECchhcc--CcCC---HHHHHHHHHHc-CCEEEEECcccccccccCcCCCCC-----cCCcEEEeCCcccC--CCCCceE
Confidence 8777777 6677 88999999999 999999999986544332222111 13458999999998 6788899
Q ss_pred EEcCHH--------------------HHHHHHHHhhccc-CCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHH
Q 014172 314 IAGPKH--------------------FVAACNKIQSQFT-SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLV 372 (429)
Q Consensus 314 v~~~~~--------------------~~~~l~~~~~~~~-~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~ 372 (429)
++..++ +.+.+.....+.. .++.....++...++.... ...+..+.+...++.+.|.
T Consensus 371 I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~--~~efk~Ya~QVv~NAkaLA 448 (586)
T PLN02271 371 IFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVA--TPEYKAYMQQVKKNAQALA 448 (586)
T ss_pred EEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHh--ChHHHHHHHHHHHHHHHHH
Confidence 887653 4444444333322 2233333333344444211 2234778888889999999
Q ss_pred HHhccCCCceeec-CCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 373 KSFGELEGVKMSE-PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 373 ~~L~~l~g~~~~~-p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
+.|.+. |++++. ..-+..+++++... + -....++++|++.||.++
T Consensus 449 ~~L~~~-G~~vv~ggTdnHlvLvDl~~~-g----------~~G~~ae~~Le~~~I~~N 494 (586)
T PLN02271 449 SALLRR-KCRLVTGGTDNHLLLWDLTTL-G----------LTGKNYEKVCEMCHITLN 494 (586)
T ss_pred HHHHHC-CCeEeeCCCCcceeeecCccc-C----------CCHHHHHHHHHHcCeEec
Confidence 999887 888763 33456788999653 1 245777788898899875
No 266
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.75 E-value=1.7e-16 Score=143.35 Aligned_cols=296 Identities=17% Similarity=0.183 Sum_probs=203.6
Q ss_pred CCCeEEcCCCC-CCCCChHHHHHHHHHHHHcCCCCCC---CCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 94 GVSVIRLAAGE-PDFDTPVLIAEAGINAIREGFTRYT---PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 94 g~~~i~L~~g~-~~~~~p~~v~~a~~~~~~~~~~~Y~---~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.+++++|+.|+ ..+..+|+++++..+++++.-.+.+ --.|+....+.+...+.++++ .++.++.+.+-.+..
T Consensus 66 ~k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~----rED~ilypscfdANa 141 (417)
T KOG1359|consen 66 DKKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHG----REDTILYPSCFDANA 141 (417)
T ss_pred ccceeeecccccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhC----CCceEEeccccccch
Confidence 35789998887 6777789999999999976211111 125777777777777766655 456666666666777
Q ss_pred HHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc----CCcEEEEcCCCCCccCCC
Q 014172 170 QAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE----KSRLLILCSPSNPTGSVY 245 (429)
Q Consensus 170 ~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~----~~~~i~l~~p~NPtG~~~ 245 (429)
.++.+++.|.|.|+..+-.+.+..+.++++. .+ ..+|+-.++..+.+ +-|+|+....-...|.+.
T Consensus 142 g~feail~pedAvfSDeLNhASIIdGirLck----ry-------~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdia 210 (417)
T KOG1359|consen 142 GAFEAILTPEDAVFSDELNHASIIDGIRLCK----RY-------RHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIA 210 (417)
T ss_pred HHHHHhcChhhhhhccccccchhhhhhHHHh----hh-------ccchhHHHHHHHHHhhhheEEEEEecceeccCCCcc
Confidence 7889999999999999999999998888875 11 12577777655542 566777777788999999
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHH
Q 014172 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN 325 (429)
Q Consensus 246 ~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~ 325 (429)
| +++|.+++++| |.++++||+++-+.++..+......+..+.+.+++.++++|.+| |.-.||..+|..++.-++
T Consensus 211 P---l~ei~~La~kY-gaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlG--ga~GGyttgp~~li~llr 284 (417)
T KOG1359|consen 211 P---LEEISQLAKKY-GALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALG--GASGGYTTGPKPLISLLR 284 (417)
T ss_pred c---HHHHHHHHHhc-CcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhc--CCCCCCccCChhHHHHHH
Confidence 9 99999999999 99999999999887775554455555556678899999999996 444599999999999998
Q ss_pred HHhhcccCCCchH--HHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCc
Q 014172 326 KIQSQFTSGASSI--SQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSE 403 (429)
Q Consensus 326 ~~~~~~~~~~~~~--~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~ 403 (429)
+..+++-++.+.+ ..-.+.++++. --.-.......+.+.+.+++.++.- |+.+......+ +.+-+.+.
T Consensus 285 qr~RpylFSnslppavV~~a~ka~dl----lm~s~~~i~~~~a~~qrfr~~me~a-GftIsg~~hPI-~pv~lGda---- 354 (417)
T KOG1359|consen 285 QRSRPYLFSNSLPPAVVGMAAKAYDL----LMVSSKEIQSRQANTQRFREFMEAA-GFTISGASHPI-CPVMLGDA---- 354 (417)
T ss_pred hcCCceeecCCCChhhhhhhHHHHHH----HHhhHHHHHHHHHHHHHHHHHHHhc-CceecCCCCCc-cceecccH----
Confidence 8766654443222 11222233332 0111233344455566666666554 88877544333 33333321
Q ss_pred ccCCCCCCChHHHHHHHHHhCCeec
Q 014172 404 AEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 404 ~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.-+..++++||+. |+.|
T Consensus 355 -------~lA~~~ad~lLk~-Gi~V 371 (417)
T KOG1359|consen 355 -------RLASKMADELLKR-GIYV 371 (417)
T ss_pred -------HHHHHHHHHHHhc-CceE
Confidence 1366888888887 7765
No 267
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.75 E-value=7.2e-16 Score=151.56 Aligned_cols=213 Identities=19% Similarity=0.224 Sum_probs=157.3
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHH----HcCCEEEEecCCC
Q 014172 135 LELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR----IADATPVILPTRI 210 (429)
Q Consensus 135 ~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~v~~~~ 210 (429)
..|.+.|++.. | .+.++++++|..|+..++.+++++||.|+++...|.+....++ ..|.++.+++.
T Consensus 58 ~~le~~la~Le----~----g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~-- 127 (386)
T PF01053_consen 58 RALEQRLAALE----G----GEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP-- 127 (386)
T ss_dssp HHHHHHHHHHH----T-----SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST--
T ss_pred HHHHHHHHHhh----c----ccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc--
Confidence 35555555553 3 3679999999999999999999999999999999998775554 47999988874
Q ss_pred CCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCC-eEEEEccCCcccccCCCCCCccccCCC
Q 014172 211 SENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR-LLVLSDEIYEHIIYAPATHTSFASLPG 289 (429)
Q Consensus 211 ~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~-i~vi~Deay~~~~~~~~~~~~~~~~~~ 289 (429)
-|++++++++++++++|++.+|.||+..+.+ +++|+++|+++ | +++|+|..+.-..+- .+ ..
T Consensus 128 -----~d~~~l~~~l~~~t~~v~~EspsNP~l~v~D---l~~i~~~a~~~-g~~~~vVDnT~atp~~~----~p-L~--- 190 (386)
T PF01053_consen 128 -----TDLEALEAALRPNTKLVFLESPSNPTLEVPD---LEAIAKLAKEH-GDILVVVDNTFATPYNQ----NP-LE--- 190 (386)
T ss_dssp -----TSHHHHHHHHCTTEEEEEEESSBTTTTB------HHHHHHHHHHT-TT-EEEEECTTTHTTTC-----G-GG---
T ss_pred -----hhHHHHHhhccccceEEEEEcCCCccccccc---HHHHHHHHHHh-CCceEEeeccccceeee----cc-Cc---
Confidence 2899999999999999999999999999999 99999999999 8 999999999752111 11 11
Q ss_pred CCCceEEEeccChhcccccce-eeEEEcC--HHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 014172 290 MWERTLTVNGFSKAFAMTGWR-LGYIAGP--KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRE 366 (429)
Q Consensus 290 ~~~~~i~~~S~SK~~~~~G~R-~G~v~~~--~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~ 366 (429)
.+.+|++.|.+|.++-.|-- .|.++++ .++.+.++......+...++.....+..-|+. +.-+.++..+
T Consensus 191 -~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~T-------l~~R~~~~~~ 262 (386)
T PF01053_consen 191 -LGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAWLLLRGLRT-------LPLRMERQNE 262 (386)
T ss_dssp -GT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHHHHHHHHTT-------HHHHHHHHHH
T ss_pred -CCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHHHHhcCCCc-------HHHHHHHHHH
Confidence 34569999999998533333 5677754 47888888777766666666665555554443 5566677778
Q ss_pred HHHHHHHHhccCCCce
Q 014172 367 RRDFLVKSFGELEGVK 382 (429)
Q Consensus 367 ~r~~l~~~L~~l~g~~ 382 (429)
+...+.+.|++.|.++
T Consensus 263 nA~~lA~~L~~hp~V~ 278 (386)
T PF01053_consen 263 NAEALAEFLEEHPKVK 278 (386)
T ss_dssp HHHHHHHHHHTSTTEE
T ss_pred HHHHHHHHHHhCCCCC
Confidence 8888999999887764
No 268
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.75 E-value=5.5e-16 Score=156.39 Aligned_cols=315 Identities=16% Similarity=0.116 Sum_probs=190.0
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.+||+..|. ..++. +|.+.+++.+++.+... .+...-..+....+++.|.+..+. ..+.++++++++++..
T Consensus 41 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~-~~~~~~~~~~~~~la~~L~~~~~~--~~~~v~f~~SGseA~e 117 (433)
T PRK08117 41 DGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMH-GPSGVIYYESILKLAEELAEITPG--GLDCFFFSNSGAEAIE 117 (433)
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccC-ccccccCCHHHHHHHHHHHHhCCC--CCCEEEEeCcHHHHHH
Confidence 578899998885 34444 78999999998865211 111111235556666666655421 2368999999999999
Q ss_pred HHHHHhcC-CC-CEEEEcCCCCCChHHHHH-HcCC-------------EEEEecCCCCCC--CC--------CCHHHHHh
Q 014172 170 QAVLAVCS-PG-DEVIIPAPFWVSYPEMAR-IADA-------------TPVILPTRISEN--FL--------LDPKVLES 223 (429)
Q Consensus 170 ~~l~~l~~-~g-d~Vlv~~p~y~~~~~~~~-~~g~-------------~~~~v~~~~~~~--~~--------~d~e~l~~ 223 (429)
.+++.... .| ..|+..+-+|.+...... ..+. .+..+|...... .. -+++.+++
T Consensus 118 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 197 (433)
T PRK08117 118 GALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLES 197 (433)
T ss_pred HHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHH
Confidence 99886421 23 568887877776543322 2111 112333221000 00 14556666
Q ss_pred hcc-----cCCcEEEEcCCCCCccCCC-CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEE
Q 014172 224 KLT-----EKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTV 297 (429)
Q Consensus 224 ~l~-----~~~~~i~l~~p~NPtG~~~-~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~ 297 (429)
.++ .++.+|++.......|.+. +.+.+++|.++|++| |+++|.||+|.+|...|.... ...+ +...-+
T Consensus 198 ~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEv~tG~gr~G~~~~-~~~~----gv~pDi 271 (433)
T PRK08117 198 LFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRH-GILLIFDEVQTGFGRTGEWFA-AQTF----GVVPDI 271 (433)
T ss_pred HHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHc-CCEEEEecchhccCccccchh-Hhhc----CCCCCE
Confidence 553 2355555555566677664 778899999999999 999999999998655543211 1111 222235
Q ss_pred eccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 014172 298 NGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 377 (429)
Q Consensus 298 ~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 377 (429)
.||||.++ +|+++|++++++++++.+.......+++.+++++.++.++|+. .++ +.+.+..+++.+++.+.|++
T Consensus 272 ~t~sK~lg-~G~pigav~~~~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~---l~~--~~l~~~~~~~g~~l~~~L~~ 345 (433)
T PRK08117 272 MTIAKGIA-SGLPLSAVVASKELMEQWPLGSHGTTFGGNPVACAAALATLEV---IKE--EKLLDNANEMGAYALERLEV 345 (433)
T ss_pred eehhhhcc-CCCcceeEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHH---HHh--ccHHHHHHHHHHHHHHHHHH
Confidence 79999999 8999999999999988875544445567789999999999875 111 13344445555555555554
Q ss_pred CC---CceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 378 LE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 378 l~---g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+. ++....+..|.++++.+....+ .........+.+.|+++ ||.+
T Consensus 346 l~~~~~~~~~vrg~Gl~~gi~~~~~~~-----~~~~~~~~~~~~~l~~~-Gv~~ 393 (433)
T PRK08117 346 LKEKHPVIGDVRGIGLMIGIEIVDPDG-----EPDGDAVEKILDKCLEK-GLLF 393 (433)
T ss_pred HHhcCCceeeeecCCcEEEEEEecCCC-----CcchHHHHHHHHHHHHC-CCEE
Confidence 31 2212223445556666632100 00001245677777665 8764
No 269
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.75 E-value=9.9e-16 Score=154.68 Aligned_cols=316 Identities=14% Similarity=0.102 Sum_probs=194.9
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 92 ~~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
..|+..||+..|. ..++- +|++.+++.+++.+. ..+....+..+.+..+++++.+..+.. ..+.+++++++++++
T Consensus 53 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~-~~~~~~~~~~~~~~~la~~l~~~~p~~-~~~~v~f~~sGseA~ 130 (443)
T PRK06058 53 VDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARF-THTCFMVTPYEGYVAVAEQLNRLTPGD-HEKRSALFNSGAEAV 130 (443)
T ss_pred CCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhc-cCccccccCCHHHHHHHHHHHHhCCCC-CCCEEEEeCCcHHHH
Confidence 3578899998886 33444 789999999998753 223222334577777888887654311 124788999999999
Q ss_pred HHHHHHhc--CCCCEEEEcCCCCCChHHHHHHc-CC-------------EEEEecCCCCCC----CCC--------CHHH
Q 014172 169 LQAVLAVC--SPGDEVIIPAPFWVSYPEMARIA-DA-------------TPVILPTRISEN----FLL--------DPKV 220 (429)
Q Consensus 169 ~~~l~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~~~----~~~--------d~e~ 220 (429)
..+++... ...++|+....+|++....+... +. .+..+|.....+ ... ..+.
T Consensus 131 e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (443)
T PRK06058 131 ENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITV 210 (443)
T ss_pred HHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHH
Confidence 99888532 12378999999999887544332 11 122222111000 001 1233
Q ss_pred HHhhcc-cCCcEEEEcCCCCCc-cCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEE
Q 014172 221 LESKLT-EKSRLLILCSPSNPT-GSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTV 297 (429)
Q Consensus 221 l~~~l~-~~~~~i~l~~p~NPt-G~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~ 297 (429)
+++.+. +++.+| |..|.+.. |.. .+++.+++|.++|++| |+++|.||++.+|...|... ....+.-..| +
T Consensus 211 l~~~~~~~~iAav-i~EPi~g~gG~~~p~~~yl~~lr~lc~~~-gillI~DEV~tGfgRtG~~f-a~~~~gv~PD----i 283 (443)
T PRK06058 211 IEKQVGADNLAAV-IIEPIQGEGGFIVPAEGFLPALLEWCREN-GVVFIADEVQTGFARTGAWF-ACEHEGIVPD----L 283 (443)
T ss_pred HHHhhCCCceEEE-EECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcChhhh-HHHhcCCCCC----E
Confidence 444443 344454 45665544 444 4577899999999999 99999999999875544321 1111111112 3
Q ss_pred eccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 014172 298 NGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 377 (429)
Q Consensus 298 ~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 377 (429)
-+++|.++ .|+++|++++++++++.+.......+++.+++++.++.+.|+. .++ +++.+..+++.+++.+.|++
T Consensus 284 v~~gK~l~-~G~Pi~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~---~~~--~~l~~~~~~~g~~l~~~L~~ 357 (443)
T PRK06058 284 ITTAKGIA-GGLPLSAVTGRAEIMDAPHPGGLGGTYGGNPVACAAALAAIET---IEE--DDLVARARQIEALMTDRLRA 357 (443)
T ss_pred EEEccccc-CCCccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHH---HHH--cCHHHHHHHHHHHHHHHHHH
Confidence 45689999 8999999999999988876554556778899999999999875 222 24556666667777777766
Q ss_pred C----CCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 378 L----EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 378 l----~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+ +.+.-+++.|.|+.+--.++... .....-...+.+.|+++ ||.+
T Consensus 358 l~~~~~~i~~vrg~G~~~~i~~~~~~~~-----~~~~~~~~~l~~~~~~~-Gv~~ 406 (443)
T PRK06058 358 LAAEDDRIGDVRGRGAMIAIELVKPGTT-----EPDAELTKALAAAAHAA-GVIV 406 (443)
T ss_pred HHhhCCcEEeeeccceEEEEEEecCCCC-----CCcHHHHHHHHHHHHHC-CeEE
Confidence 4 22333567777754432221100 00000134566666665 8875
No 270
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.74 E-value=2.5e-16 Score=154.25 Aligned_cols=233 Identities=21% Similarity=0.256 Sum_probs=145.7
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCC
Q 014172 135 LELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENF 214 (429)
Q Consensus 135 ~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~ 214 (429)
.+..+.+|+. || ..+..++++|+|.++..++++++++||.||++..+|-+....+.+.|+++++++.. .+.+
T Consensus 69 ~eAe~~aA~~----fG---Ad~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~-~~~~ 140 (417)
T PF01276_consen 69 KEAEELAARA----FG---ADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPE-DNEY 140 (417)
T ss_dssp HHHHHHHHHH----HT---ESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEE-E-TT
T ss_pred HHHHHHHHHh----cC---CCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCC-cccc
Confidence 3455555555 45 45678999999999999999999999999999999999999999999999999865 2222
Q ss_pred ----CCCH-----HHHHhhccc--CCcE---EEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcc-cccCCC
Q 014172 215 ----LLDP-----KVLESKLTE--KSRL---LILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPA 279 (429)
Q Consensus 215 ----~~d~-----e~l~~~l~~--~~~~---i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~-~~~~~~ 279 (429)
.+++ +.|+++++. ..|+ ++|++|+. -|.+++ +++|+++|+++ ++.|++||||+. +.|. .
T Consensus 141 gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~-~~~llvDEAhGah~~F~-~ 214 (417)
T PF01276_consen 141 GIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYD---IKEIAEICHKH-GIPLLVDEAHGAHFGFH-P 214 (417)
T ss_dssp S-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE----HHHHHHHHCCT-ECEEEEE-TT-TTGGCS-G
T ss_pred CCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEEC---HHHHHHHhccc-CCEEEEEccccccccCC-C
Confidence 3466 899988863 4444 99999987 799999 99999999999 999999999884 4454 2
Q ss_pred CCCccccCCC---CCCceEEEeccChhccccccee-eEEEcCHH---HHHHHHHHhhcc-cCCCchHHHHHHHHHHhcCC
Q 014172 280 THTSFASLPG---MWERTLTVNGFSKAFAMTGWRL-GYIAGPKH---FVAACNKIQSQF-TSGASSISQKAGVAALGLGY 351 (429)
Q Consensus 280 ~~~~~~~~~~---~~~~~i~~~S~SK~~~~~G~R~-G~v~~~~~---~~~~l~~~~~~~-~~~~~~~~q~aa~~~l~~~~ 351 (429)
.+.+...+.. ....++++.|.+|.+ +++.- +++....+ -.+++.+..... +.+|+.+..+..-.+...
T Consensus 215 lp~~a~~~gad~~~~~~~~vvqS~HKtL--~altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lmASlD~a~~~-- 290 (417)
T PF01276_consen 215 LPRSALALGADRPNDPGIIVVQSTHKTL--PALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLMASLDVARAQ-- 290 (417)
T ss_dssp GGTTCSSTTSS-CTSBEEEEEEEHHHHS--SS-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHHHHHHHHHHH--
T ss_pred CccchhhccCccccccceeeeechhhcc--cccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHHHHHHHHHHH--
Confidence 2222222221 134679999999998 45554 45544333 234555443333 333444433322222221
Q ss_pred CC-hHHHHHHHHHHHHHHHHHHHHh---ccCCCceeecC
Q 014172 352 AG-GEVVSKMVKAFRERRDFLVKSF---GELEGVKMSEP 386 (429)
Q Consensus 352 ~~-~~~~~~~~~~~~~~r~~l~~~L---~~l~g~~~~~p 386 (429)
. ...-+++.++..++.+.+++.+ .++.++++..|
T Consensus 291 -m~~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~ 328 (417)
T PF01276_consen 291 -MEEEEGRELLEEAIELAEEFRKKINRLNDIWGFKVLGP 328 (417)
T ss_dssp -HSHHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-
T ss_pred -HhhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEecCCc
Confidence 1 1222334444445555555555 55656665433
No 271
>PRK04311 selenocysteine synthase; Provisional
Probab=99.74 E-value=3.8e-15 Score=149.77 Aligned_cols=250 Identities=23% Similarity=0.237 Sum_probs=161.8
Q ss_pred ChHHHHHHHHHHHHcCC-CCCCCC---CC--CHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEE
Q 014172 109 TPVLIAEAGINAIREGF-TRYTPN---AG--TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEV 182 (429)
Q Consensus 109 ~p~~v~~a~~~~~~~~~-~~Y~~~---~G--~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~V 182 (429)
.|+++.+++.+.+.... ..|... .| +..+++.+++++ | .+.++++++++.++.+++.+ +.+||+|
T Consensus 98 l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~----G----ae~a~vv~sgtaAl~l~l~~-l~~GdeV 168 (464)
T PRK04311 98 LSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALT----G----AEDALVVNNNAAAVLLALNA-LAAGKEV 168 (464)
T ss_pred CCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHh----C----CCeEEEECCHHHHHHHHHHH-hCCCCEE
Confidence 47889999988876431 122221 12 245666666664 3 34677888888999988865 5799999
Q ss_pred EEcCCCCCC------hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCC--cc--CCCCHHHHHH
Q 014172 183 IIPAPFWVS------YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNP--TG--SVYPKNLLDE 252 (429)
Q Consensus 183 lv~~p~y~~------~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NP--tG--~~~~~~~l~~ 252 (429)
++++..+.. ....++..|++++.++... ..++++++++++++|++|++.+++|| +| ...+ +++
T Consensus 169 Ivs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~----~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~d---l~e 241 (464)
T PRK04311 169 IVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN----RTHLRDYEQAINENTALLLKVHTSNYRIEGFTKEVS---LAE 241 (464)
T ss_pred EEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC----CCCHHHHHHhcCccCeEEEEEcCCCccccccCCcCC---HHH
Confidence 999864431 2346778899999998642 24799999999999999999999998 34 5567 999
Q ss_pred HHHHHHhCCCeEEEEccCCcccc----cCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHh
Q 014172 253 IARIVAKHPRLLVLSDEIYEHII----YAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ 328 (429)
Q Consensus 253 I~~~a~~~~~i~vi~Deay~~~~----~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~ 328 (429)
|+++|++| |+++|+|.+.+.+. |+-...+.+.... ..+..++++|.+|.+| |...|++++.+++++.+++..
T Consensus 242 I~~lak~~-gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l-~~GaDiv~fSg~K~Lg--Gp~~G~i~g~~~li~~l~~~~ 317 (464)
T PRK04311 242 LAALGKEH-GLPVVYDLGSGSLVDLSQYGLPDEPTVQELL-AAGVDLVTFSGDKLLG--GPQAGIIVGKKELIARLKKHP 317 (464)
T ss_pred HHHHHHHc-CCeEEEECCCcccccchhccCCCCCchhhHH-hcCCcEEEecCccccc--CCceEEEEEcHHHHHHHhhch
Confidence 99999999 99999999654331 2101112222211 1456799999999986 446899999999988776421
Q ss_pred hcccCCCchHHHHHHHHHHhcCCC-Ch--------HHHHHHHHHHHHHHHHHHHHhccC
Q 014172 329 SQFTSGASSISQKAGVAALGLGYA-GG--------EVVSKMVKAFRERRDFLVKSFGEL 378 (429)
Q Consensus 329 ~~~~~~~~~~~q~aa~~~l~~~~~-~~--------~~~~~~~~~~~~~r~~l~~~L~~l 378 (429)
.............+..+.|..... .. +.+....++.+++...+.+.|+..
T Consensus 318 ~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~ 376 (464)
T PRK04311 318 LKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAA 376 (464)
T ss_pred hHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhc
Confidence 111111223333333333321000 01 112233466667788888888775
No 272
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.73 E-value=1.5e-15 Score=152.58 Aligned_cols=312 Identities=13% Similarity=0.104 Sum_probs=184.9
Q ss_pred cCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCC-cEEE-ecChHHH
Q 014172 93 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPD-QILV-SNGAKQS 167 (429)
Q Consensus 93 ~g~~~i~L~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~-~i~~-t~G~~~a 167 (429)
.|+..||+..|.. .++- +|.+.+++.+.+.+...... .....+.+..+++.+.+....+...+ .+++ +++++++
T Consensus 37 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~-~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA 115 (425)
T PRK09264 37 DGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHG-LDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTNA 115 (425)
T ss_pred CCCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccccc-cccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHH
Confidence 5788999988863 3343 78999999998864211111 11123455666666654321111112 5655 5899999
Q ss_pred HHHHHHHhcC-CC-CEEEEcCCCCCChHHHHHHc-C------------CEEEEecCCCCCCC-CCCHHHHHhhccc----
Q 014172 168 ILQAVLAVCS-PG-DEVIIPAPFWVSYPEMARIA-D------------ATPVILPTRISENF-LLDPKVLESKLTE---- 227 (429)
Q Consensus 168 l~~~l~~l~~-~g-d~Vlv~~p~y~~~~~~~~~~-g------------~~~~~v~~~~~~~~-~~d~e~l~~~l~~---- 227 (429)
++.+++.... .| .+|+....+|.+....+... | ..++.+|.+..... .-|++.+++.+..
T Consensus 116 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~ 195 (425)
T PRK09264 116 VEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSG 195 (425)
T ss_pred HHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCC
Confidence 9988887632 23 67888888888765433222 1 12344443211000 0167788887742
Q ss_pred --CCcEEEEcCCCCCccC-CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhc
Q 014172 228 --KSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF 304 (429)
Q Consensus 228 --~~~~i~l~~p~NPtG~-~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 304 (429)
++.+|++.......|. +.+.+.+++|.++|++| |+++|+||++.++...|.. .......-..+ +.+|+|.+
T Consensus 196 ~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEV~tG~GrtG~~-~~~~~~~v~PD----i~t~~K~l 269 (425)
T PRK09264 196 VDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKH-DILLIVDDIQAGCGRTGTF-FSFERAGITPD----IVTLSKSI 269 (425)
T ss_pred CCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHc-CcEEEEechhhCCccccHH-HHHhhcCCCCC----EEEecccc
Confidence 3456666555666776 56888999999999999 9999999999876433321 11111111112 45789999
Q ss_pred ccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc----CCC
Q 014172 305 AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE----LEG 380 (429)
Q Consensus 305 ~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----l~g 380 (429)
+..|.++|++++++++ ..+.......+++.+.++..++.+++..-. ++ .++.+..+++.+++.+.|++ .+.
T Consensus 270 ~~~G~pigav~~~~~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~~--~~--~~l~~~~~~~g~~l~~~l~~l~~~~~~ 344 (425)
T PRK09264 270 SGYGLPMALVLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEEYW--SD--DAFEKEVKAKGELVRERLEEIAAKYPG 344 (425)
T ss_pred CCCccceEEEEEchhh-hccCCCccCCCCCCCHHHHHHHHHHHHHHH--hh--hHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9449999999999886 343322223345566777777767773200 11 13444445555555555544 332
Q ss_pred ceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 381 VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 381 ~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.......|+++++.++.. ....+++..|+++ ||.+
T Consensus 345 ~~~~vrg~Gl~~~i~l~~~-----------~~~~~l~~~~~~~-Gv~~ 380 (425)
T PRK09264 345 LGAEVRGRGMMQGIDFGDG-----------ELAGKIAAEAFEN-GLII 380 (425)
T ss_pred ceecceecccEEEEEecCh-----------HHHHHHHHHHHHC-CCEE
Confidence 3222234567788888642 1356788888776 7765
No 273
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.73 E-value=3.4e-15 Score=151.07 Aligned_cols=303 Identities=17% Similarity=0.096 Sum_probs=182.1
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCC-C-----C-CCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEE---ecCh
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGF-T-----R-YTPNAGTLELRSAICHKLKEENGLSYTPDQILV---SNGA 164 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~-~-----~-Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~---t~G~ 164 (429)
++.|+|-..++. +++.+.+++...+.+.+ . + |+......++.+...+...+.++. ....+.+ ..++
T Consensus 34 ~~~l~liasen~--~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~--~~~~~~~nv~~~SG 109 (475)
T PLN03226 34 WKGLELIASENF--TSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRL--DPEKWGVNVQPLSG 109 (475)
T ss_pred HcCeeEecCCcc--CCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCC--CcceeEEecCcCch
Confidence 356888888877 45678888877773321 1 2 222222234444333444445552 3333333 3566
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCCChHHH------HHHcCCEEE----EecCCCCCCCCCCHHHHHhhcc-cCCcEEE
Q 014172 165 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEM------ARIADATPV----ILPTRISENFLLDPKVLESKLT-EKSRLLI 233 (429)
Q Consensus 165 ~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~------~~~~g~~~~----~v~~~~~~~~~~d~e~l~~~l~-~~~~~i~ 233 (429)
+.++..++.++++|||+|+..+....++... .+..+.... .+.++. +++.+|+++|++.+. .++++|+
T Consensus 110 ~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~-~~g~iD~d~Le~~l~~~~pklIv 188 (475)
T PLN03226 110 SPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDE-STGLIDYDKLEKKAMLFRPKLII 188 (475)
T ss_pred HHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecC-CCCCcCHHHHHHHHhhcCCeEEE
Confidence 7778889999999999999865322222211 112222221 334443 346799999999886 4677665
Q ss_pred EcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeE
Q 014172 234 LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY 313 (429)
Q Consensus 234 l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~ 313 (429)
+ ..++ +|...+ +++|.++|+++ |.++++|+++..........++. + ....++++|++|++ .|.+.|+
T Consensus 189 ~-~~S~-~s~~~D---~a~i~~ia~~~-ga~LlvD~AH~~Gli~~~~~~~p--~---~~~Div~~t~hK~L--~GP~Gg~ 255 (475)
T PLN03226 189 A-GASA-YPRDWD---YARMRKIADKV-GALLMCDMAHISGLVAAQEAASP--F---EYCDVVTTTTHKSL--RGPRGGM 255 (475)
T ss_pred E-ecCc-CCCccC---HHHHHHHHHHc-CCEEEEEchhhhCcccCCCCCCC--C---CCCeEEEecCcccc--cCCCceE
Confidence 5 3344 778888 88999999999 99999999998755443222111 1 13458999999998 3444599
Q ss_pred EEcCHHHH-----------HH---HHHHhh-cccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC
Q 014172 314 IAGPKHFV-----------AA---CNKIQS-QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL 378 (429)
Q Consensus 314 v~~~~~~~-----------~~---l~~~~~-~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l 378 (429)
++++++.+ +. +..... .+..+++.....++.++|+.- .....+.++++..++.+++.+.|.+.
T Consensus 256 I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i--~~~~~~~~~~~~~~na~~L~~~L~~~ 333 (475)
T PLN03226 256 IFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQA--MTPEFKAYQKQVKANAAALANRLMSK 333 (475)
T ss_pred EEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHH--hCcCHHHHHHHHHHHHHHHHHHHHhC
Confidence 98877544 22 111111 123333444444444555531 11234667888899999999999886
Q ss_pred CCceeecCC-ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 379 EGVKMSEPQ-GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 379 ~g~~~~~p~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
|+++..+. .+..+++++... + .+..++.+. |++.||.++
T Consensus 334 -G~~l~~~~t~~hi~lv~~~~~-g---------i~~~~~~~~-L~~~~I~~n 373 (475)
T PLN03226 334 -GYKLVTGGTDNHLVLWDLRPL-G---------LTGSRVEKV-LDLAHITLN 373 (475)
T ss_pred -CCEEEcCCCCCCEEEEEccCC-C---------CCHHHHHHH-HHHCCCEEC
Confidence 99887532 245577887432 1 245555554 566788764
No 274
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.73 E-value=9.1e-16 Score=153.66 Aligned_cols=215 Identities=13% Similarity=0.151 Sum_probs=151.7
Q ss_pred CHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChH----HHHHHcCCEEEEecCC
Q 014172 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVILPTR 209 (429)
Q Consensus 134 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~ 209 (429)
...+++.+++++ | . +..+++++++.++.+++.+++++||+|+++...|.+.. ..+...|+++++++ +
T Consensus 71 ~~~le~~la~l~----g---~-~~~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-~ 141 (437)
T PRK05613 71 VEALENRIASLE----G---G-VHAVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE-N 141 (437)
T ss_pred HHHHHHHHHHHh----C---C-CeEEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-C
Confidence 356666666664 3 2 34455555557888888888999999999999998764 44577899999997 2
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCC
Q 014172 210 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 289 (429)
Q Consensus 210 ~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~ 289 (429)
+ .|++.+++++++++++|++.++.||+|.+.+ +++|.++|+++ |+++|+|.++..... ..++ .
T Consensus 142 ~-----~d~e~l~~~l~~~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~-gi~livD~t~a~g~~----~~p~-~--- 204 (437)
T PRK05613 142 P-----DDPESWQAAVQPNTKAFFGETFANPQADVLD---IPAVAEVAHRN-QVPLIVDNTIATAAL----VRPL-E--- 204 (437)
T ss_pred C-----CCHHHHHHhCCccCeEEEEECCCCCCCcccC---HHHHHHHHHHc-CCeEEEECCCccccc----cChH-H---
Confidence 2 2899999999999999999999999999999 99999999999 999999999865211 1111 1
Q ss_pred CCCceEEEeccChhcccccceeeEEEc-CHHH-----------------------------------H-HHHHHHhhccc
Q 014172 290 MWERTLTVNGFSKAFAMTGWRLGYIAG-PKHF-----------------------------------V-AACNKIQSQFT 332 (429)
Q Consensus 290 ~~~~~i~~~S~SK~~~~~G~R~G~v~~-~~~~-----------------------------------~-~~l~~~~~~~~ 332 (429)
.+..+++.|++|.++-.|.-+|-+++ +.++ . +.........+
T Consensus 205 -~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 283 (437)
T PRK05613 205 -LGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTG 283 (437)
T ss_pred -hCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcC
Confidence 24569999999999755655555443 2210 0 11112333445
Q ss_pred CCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCce
Q 014172 333 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK 382 (429)
Q Consensus 333 ~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~ 382 (429)
.+.+++....+..-| +-+.-+.++..++...+.+.|++.|.+.
T Consensus 284 ~~~~p~~a~l~~rgl-------~TL~lR~~~~~~nA~~lA~~L~~hp~V~ 326 (437)
T PRK05613 284 ATLSPFNAWVTAQGL-------DTLSLRLERHNENAIKVAEFLNNHEKVA 326 (437)
T ss_pred CCCCHHHHHHHHccc-------CcHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 556666544444333 3356667777888888999999887653
No 275
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.73 E-value=2.1e-15 Score=151.63 Aligned_cols=315 Identities=16% Similarity=0.088 Sum_probs=188.2
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..+|+..|. ..++- +|++.+++.+++.+..+.. ...-..+.+..+++.+.+..+. ..+.+++++++++++.
T Consensus 40 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~-~~~~~~~~~~~la~~l~~~~p~--~~~~v~f~~sGseA~e 116 (423)
T PRK05964 40 DGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVI-FAGFTHEPAERLAQRLVALTPG--GLDHVFFSDSGSVAVE 116 (423)
T ss_pred CCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCcc-ccccCCHHHHHHHHHHHHhCCC--CCCEEEEeCCcHHHHH
Confidence 577899998885 33444 7899999999887532111 1011235566777777655421 2368999999999999
Q ss_pred HHHHHhcC-------CC-CEEEEcCCCCCChHHHHHHcCC-------------EEEEecCCCCCCCCCCHHHHHhhcc--
Q 014172 170 QAVLAVCS-------PG-DEVIIPAPFWVSYPEMARIADA-------------TPVILPTRISENFLLDPKVLESKLT-- 226 (429)
Q Consensus 170 ~~l~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~~~d~e~l~~~l~-- 226 (429)
.+++.... +| .+|+...-+|++....+..... .+..++....+....+++.+++.+.
T Consensus 117 ~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~ 196 (423)
T PRK05964 117 VALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKH 196 (423)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhC
Confidence 99887531 23 5788888888875543332111 1223332211100112788888774
Q ss_pred -cCCcEEEEcC-CCCCccCCC-CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChh
Q 014172 227 -EKSRLLILCS-PSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKA 303 (429)
Q Consensus 227 -~~~~~i~l~~-p~NPtG~~~-~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 303 (429)
++..+|++.. .++..|... +.+.+++|.++|++| |+++|+||++.++...|.. ...... +...-+.+++|.
T Consensus 197 ~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~-g~llI~DEv~tg~gr~G~~-~a~~~~----~v~pDi~~~~K~ 270 (423)
T PRK05964 197 AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRH-GVLLIFDEIATGFGRTGTL-FACEQA----GVSPDIMCLSKG 270 (423)
T ss_pred CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCcCcch-hHHHhc----CCCCCeeeeehh
Confidence 2445665544 367778665 888999999999999 9999999999876444421 111111 111224578999
Q ss_pred cccccceeeEEEcCHHHHHHHHHH------hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 014172 304 FAMTGWRLGYIAGPKHFVAACNKI------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 377 (429)
Q Consensus 304 ~~~~G~R~G~v~~~~~~~~~l~~~------~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 377 (429)
++..++++|++++++++++.+... ....+++.+.++..++.++|+.-. .++++++..+.-+..++.+.+ +.+
T Consensus 271 l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~-~~~~~~~~~~~g~~l~~~l~~-l~~ 348 (423)
T PRK05964 271 LTGGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFE-DEPVLERVAALSAGLAEGLEP-FRD 348 (423)
T ss_pred hhcCcccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHh-hcc
Confidence 983338999999999999887532 112334567888888888887310 123444444444444443332 223
Q ss_pred CCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 378 LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 378 l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+.+.-+...|.+ +.+.+..... ......+.+.|+++ ||.+
T Consensus 349 ~~~i~~vrg~Gl~-~~i~l~~~~~--------~~~~~~l~~~l~~~-Gv~v 389 (423)
T PRK05964 349 LPGVADVRVLGAI-GAVELDRPVL--------ERDGPALRAFALER-GVLL 389 (423)
T ss_pred CCCeEEeecccEE-EEEEeccCcc--------hhHHHHHHHHHHHC-CeEE
Confidence 4444323444544 5566643100 00256788888765 8875
No 276
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.72 E-value=6.7e-16 Score=139.82 Aligned_cols=296 Identities=18% Similarity=0.286 Sum_probs=197.4
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhc
Q 014172 97 VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC 176 (429)
Q Consensus 97 ~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~ 176 (429)
.+||-+..-.. |..++.+++.++.. +..-|+.++...+|.+.+|+.++++. -.++++|+...+. +++.-|
T Consensus 23 ~vDLRSDTvT~-PTdeMr~am~eA~v-gDdVyGeD~tt~rLE~~vA~l~GKEA-------gLFv~SGTmgNll-aIm~Hc 92 (384)
T KOG1368|consen 23 SVDLRSDTVTV-PTDEMRRAMAEASV-GDDVYGEDPTTNRLEQRVAELFGKEA-------GLFVPSGTMGNLL-AIMVHC 92 (384)
T ss_pred ccccccccccC-ChHHHHHHHhhccc-CcccccCCccHHHHHHHHHHHhCccc-------eeeecccccccHH-HHHHHh
Confidence 45555444322 24788888888754 33457777777899999999875432 3566666665555 556655
Q ss_pred -CCCCEEEEcCCCCCChH---HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc--------CCcEEEEcCCCCCcc-C
Q 014172 177 -SPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTE--------KSRLLILCSPSNPTG-S 243 (429)
Q Consensus 177 -~~gd~Vlv~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--------~~~~i~l~~p~NPtG-~ 243 (429)
++|.+|++.+-+|.-.. .+..+.|+.++.+.. +++..+|+++|++++.. .+++|++.|-+|-+| .
T Consensus 93 ~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~--e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~ 170 (384)
T KOG1368|consen 93 HQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKN--ENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGK 170 (384)
T ss_pred cCCCceEEeccchheeehhccChhhhccceeEeeee--CCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCce
Confidence 59999999998776433 245567777776654 45566999999999862 479999988877666 9
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEE-EcCHHHHH
Q 014172 244 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYI-AGPKHFVA 322 (429)
Q Consensus 244 ~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v-~~~~~~~~ 322 (429)
++|.|++++|.++|++| ++.+..|.+--+-.-- ....++..+....|.+=+ .|||.+|.| +|-+ ++++++++
T Consensus 171 vlPle~~~~v~~lak~~-glkLH~DGARi~NAav-asgV~vk~i~~~fDSVsi--CLSKglgAP---VGSViVG~k~FI~ 243 (384)
T KOG1368|consen 171 VLPLEELDRVKALAKRH-GLKLHMDGARIFNAAV-ASGVPVKKICSAFDSVSI--CLSKGLGAP---VGSVIVGSKDFID 243 (384)
T ss_pred EeeHHHHHHHHHHHhcc-CCeeecchhhhhhHHH-HcCCCHHHHHHhhhhhhh--hhhccCCCC---cccEEEccHHHHH
Confidence 99999999999999999 9999999885431100 011233333332333333 389998743 5654 58999999
Q ss_pred HHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC--CceEEEEEecCCcc
Q 014172 323 ACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP--QGAFYLFIDFSTYY 400 (429)
Q Consensus 323 ~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p--~~~~~~~~~l~~~~ 400 (429)
..+..+...+.+.-+.+..++++.... ++... ..+.-.++...+.+.+...+++++..| +.+| +.+.+-..
T Consensus 244 kA~~~RKalGGGmRQsGvLaaaaLval----~~~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNi-v~~~l~q~- 316 (384)
T KOG1368|consen 244 KARHFRKALGGGMRQSGVLAAAALVAL----DENVP-LLRADHKRAKELAEYINTPEEIRVEVPAVETNI-VNMVLCQA- 316 (384)
T ss_pred HHHHHHHHhcCchhHHHHHHHHHHHHh----hcchH-HHHHHHHHHHHHHHHhccccceeeecchhhcce-eeeecccc-
Confidence 988887777777766666555555543 22233 333444566667788887766776655 4444 66555321
Q ss_pred CCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 401 GSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
..+.++++++|.+. ||.+
T Consensus 317 ---------~~~~~~l~~~~~k~-gi~l 334 (384)
T KOG1368|consen 317 ---------RLTAEELCKFLEKN-GILL 334 (384)
T ss_pred ---------cCCHHHHHHHHHHC-CeEE
Confidence 13889999998654 8764
No 277
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.71 E-value=2e-15 Score=147.35 Aligned_cols=303 Identities=17% Similarity=0.160 Sum_probs=183.6
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCC------C-CCCCCCCHHHHHHHHHHHHhhcCCCCCCCcE-EEecChHHH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFT------R-YTPNAGTLELRSAICHKLKEENGLSYTPDQI-LVSNGAKQS 167 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~------~-Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i-~~t~G~~~a 167 (429)
..|+|-..++. +++.+.+++...+.+.+. + |+...-..++.+...++..+.||.....+.+ +-..+++.+
T Consensus 21 ~~l~LiaSEN~--~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~A 98 (399)
T PF00464_consen 21 STLNLIASENY--MSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQA 98 (399)
T ss_dssp HSEE-CTT-------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHH
T ss_pred cCccccCcccc--cCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHH
Confidence 46999888876 345666666655543221 1 2222223466666677778888854222233 233467778
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCCChHH---HH-------HHcCCEEEEecCCCCCCCCCCHHHHHhhccc-CCcEEEEcC
Q 014172 168 ILQAVLAVCSPGDEVIIPAPFWVSYPE---MA-------RIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCS 236 (429)
Q Consensus 168 l~~~l~~l~~~gd~Vlv~~p~y~~~~~---~~-------~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~ 236 (429)
...++.+|++|||+|+..++...++.. .. .....+.+.++++++ ++.+|.+++++.+.. ++|+|++..
T Consensus 99 n~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~-~~~ID~d~l~~~a~~~kPklIi~G~ 177 (399)
T PF00464_consen 99 NLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPD-TGLIDYDELEKLAKEHKPKLIICGA 177 (399)
T ss_dssp HHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TT-TSSB-HHHHHHHHHHH--SEEEEE-
T ss_pred HHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecC-CCeECHHHHHHHHhhcCCCEEEECc
Confidence 888999999999999999887765542 11 223467888888764 577999999998864 899988744
Q ss_pred CCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcc-cccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEE
Q 014172 237 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA 315 (429)
Q Consensus 237 p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~ 315 (429)
-.+| ..++ ++++.++|++. |.+++.|-+|.. ++-+|..+-++ .. ..|+.+|.+|+| +|.|-|.++
T Consensus 178 S~y~--~~~d---~~~~reIad~v-ga~l~~D~sH~~GLIa~g~~~~P~-~~-----ADvvt~sThKtl--~GPrggiI~ 243 (399)
T PF00464_consen 178 SSYP--RPID---FKRFREIADEV-GAYLMADISHIAGLIAGGLFPNPF-PY-----ADVVTGSTHKTL--RGPRGGIIL 243 (399)
T ss_dssp SSTS--S------HHHHHHHHHHT-T-EEEEE-TTTHHHHHTTSS--GC-CT-----SSEEEEESSGGG---SSS-EEEE
T ss_pred hhcc--CccC---HHHHHHHHHhc-CcEEEecccccccceehheecCcc-cc-----ceEEEeeccccc--cccCceEEE
Confidence 3333 2234 89999999999 999999999874 33344322233 22 239999999998 899999999
Q ss_pred cC--------------HHHHHHHHHHhhcccCCCchHHHHHHH-HHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCC
Q 014172 316 GP--------------KHFVAACNKIQSQFTSGASSISQKAGV-AALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG 380 (429)
Q Consensus 316 ~~--------------~~~~~~l~~~~~~~~~~~~~~~q~aa~-~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g 380 (429)
++ +++.+.+.+...+...+.+.....++. .+|... .....++..++..++.+.|.+.|.+. |
T Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea--~~~~fk~Ya~qVv~NAk~La~~L~~~-G 320 (399)
T PF00464_consen 244 TNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEA--LSPEFKEYAKQVVKNAKALAEALQER-G 320 (399)
T ss_dssp ES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHH--TSHHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred EcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcc--cCHHHHHHHHHHHHHHHHHHHHHhhC-C
Confidence 99 788888888766655444444443333 333321 13446788888889999999999998 8
Q ss_pred ceeec-CCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 381 VKMSE-PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 381 ~~~~~-p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
+++.. ...+..+|+++... + .+. .-+++.|++.||.++
T Consensus 321 ~~v~~ggTd~H~vlvd~~~~-~---------~~g-~~a~~~Le~~gI~vn 359 (399)
T PF00464_consen 321 FKVVTGGTDNHQVLVDLRSF-G---------IDG-KEAEKALEEAGIIVN 359 (399)
T ss_dssp -EEGGGS-SSSEEEEEGGGG-T---------S-H-HHHHHHHHHTTEE-E
T ss_pred cEEEECCCCCCeEEEEeccc-c---------cch-HHHHHHHHhcCeeec
Confidence 88863 33456689999653 1 134 445667788899874
No 278
>PLN03032 serine decarboxylase; Provisional
Probab=99.71 E-value=2.1e-15 Score=147.67 Aligned_cols=267 Identities=14% Similarity=0.076 Sum_probs=183.4
Q ss_pred HHHHHHHHHHcCCCC----CCCCCCCHHHHHHHHHHHHhhcCCCCCCCcE--EEecChHHHHHHHHHHhc--CCCCEEEE
Q 014172 113 IAEAGINAIREGFTR----YTPNAGTLELRSAICHKLKEENGLSYTPDQI--LVSNGAKQSILQAVLAVC--SPGDEVII 184 (429)
Q Consensus 113 v~~a~~~~~~~~~~~----Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i--~~t~G~~~al~~~l~~l~--~~gd~Vlv 184 (429)
.++++.+.+.+...+ +.......++.+.+.+++.+.+|. +++++ ++|+|+|+++..++.+.. .++..|++
T Consensus 39 ~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~--~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~ 116 (374)
T PLN03032 39 ELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEL--EKDEYWGYITTCGTEGNLHGILVGREVFPDGILYA 116 (374)
T ss_pred HHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCC--CCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEe
Confidence 466666655432211 111124578888888888888884 56665 999999999998887654 24568999
Q ss_pred cCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc---CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCC
Q 014172 185 PAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP 261 (429)
Q Consensus 185 ~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~---~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~ 261 (429)
+.-.|.+....++.+|.+++.||++. ++.+|++.|++++++ ++.+|+++..+|+||++-| +++|+++|++|
T Consensus 117 s~~~H~Sv~kaa~~lg~~~~~V~~d~--~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp---i~eI~~i~~~~- 190 (374)
T PLN03032 117 SRESHYSVFKAARMYRMEAVKVPTLP--SGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDD---LDRILRILKEL- 190 (374)
T ss_pred CCCceeHHHHHHHHcCCCCeEeeeCC--CCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC---HHHHHHHHHHh-
Confidence 99999999999999999999999864 456999999999976 4667778889999999999 99999999998
Q ss_pred C-----eEEEEccCCcccc--cCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcc---
Q 014172 262 R-----LLVLSDEIYEHII--YAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF--- 331 (429)
Q Consensus 262 ~-----i~vi~Deay~~~~--~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~--- 331 (429)
+ +|+++|.+|+.+. |... .+. ..+. .....+..|.+|.++ ....+|.++..++.++.+.....+.
T Consensus 191 g~~~~~~~lHvDaA~gg~~~p~~~~-~~~-~~~~--~~vDSis~s~HK~~g-~P~g~G~ll~r~~~~~~~~~~~~Yl~~~ 265 (374)
T PLN03032 191 GYTEDRFYIHCDGALFGLMMPFVSR-APE-VTFR--KPIGSVSVSGHKFLG-CPMPCGVALTRKKHVKALSQNVEYLNSR 265 (374)
T ss_pred CCCCCCeeEEEEccchhhhhhccCC-Ccc-cCCC--cCCcEEEECcccccC-CCcCeEEEEEEchhhHhhccCCcccCCC
Confidence 6 5999999998642 2111 011 1111 134467888999887 3456899998877665543211111
Q ss_pred --cCCCch--HHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCcee-ecCCceEEEEEec
Q 014172 332 --TSGASS--ISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM-SEPQGAFYLFIDF 396 (429)
Q Consensus 332 --~~~~~~--~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~-~~p~~~~~~~~~l 396 (429)
+...+. .....+-..|.. .+.+.+.++.++.-++.+++.+.|++. ++++ ..|.... +.+.-
T Consensus 266 d~ti~gSR~g~~~l~~w~~l~~--~G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p~~~~-V~f~~ 331 (374)
T PLN03032 266 DATIMGSRNGHAPLYLWYTLRR--KGYRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLNELSST-VVFER 331 (374)
T ss_pred CCcccCCCchHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEECCCceE-EEEcC
Confidence 111222 222233333332 246778888888888999999999887 6654 4565554 44443
No 279
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.70 E-value=2.2e-14 Score=143.90 Aligned_cols=198 Identities=23% Similarity=0.253 Sum_probs=138.4
Q ss_pred ChHHHHHHHHHHHHcCC-CCCCCC---CC--CHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEE
Q 014172 109 TPVLIAEAGINAIREGF-TRYTPN---AG--TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEV 182 (429)
Q Consensus 109 ~p~~v~~a~~~~~~~~~-~~Y~~~---~G--~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~V 182 (429)
.|+++++++.+.+.... ..|.-. .| ...+++.+++++ | .+..+++++++.++.+++.+ +.+||+|
T Consensus 93 l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~----g----ae~alvv~sg~aAi~l~l~~-l~~GdeV 163 (454)
T TIGR00474 93 LAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELT----G----AEDALVVNNNAAAVLLALNT-LAKGKEV 163 (454)
T ss_pred CCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHH-hCCcCEE
Confidence 47899999988876421 122211 11 246667777665 3 23456677788888877754 6899999
Q ss_pred EEcCCCCCC------hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCc--c--CCCCHHHHHH
Q 014172 183 IIPAPFWVS------YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPT--G--SVYPKNLLDE 252 (429)
Q Consensus 183 lv~~p~y~~------~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPt--G--~~~~~~~l~~ 252 (429)
++++..|.. ....++..|++++.++.+. ..++++++++++++|++|++.+++|++ | .+.+ +++
T Consensus 164 Ivs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~----~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~d---l~~ 236 (454)
T TIGR00474 164 IVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN----RTHLKDYEDAITENTALLLKVHTSNYRIVGFTEEVS---IAE 236 (454)
T ss_pred EECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC----CCCHHHHHHhcCcCCEEEEEEccCcccccCCCCCCC---HHH
Confidence 999876432 2356778899999998642 148999999999999999999999985 6 4678 999
Q ss_pred HHHHHHhCCCeEEEEccCCcccc----cCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHH
Q 014172 253 IARIVAKHPRLLVLSDEIYEHII----YAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK 326 (429)
Q Consensus 253 I~~~a~~~~~i~vi~Deay~~~~----~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~ 326 (429)
|+++|++| |+++++|.+.+.+. |+-...+.+.... ..+..++++|.+|.++ |...|++++.+++++.+.+
T Consensus 237 I~~la~~~-g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~-~~GaDiv~fSg~K~Lg--Gp~~G~i~g~~~~i~~l~~ 310 (454)
T TIGR00474 237 LVALGREH-GLPVMEDLGSGSLVDLSRYGLPDEPTVQEVI-AAGVDLVTFSGDKLLG--GPQAGIIVGKKELIERLKK 310 (454)
T ss_pred HHHHHHHc-CCeEEEECCCcccccchhccCCCCcccccHh-HcCCCEEEecCccccC--CCeEEEEEECHHHHHhhhh
Confidence 99999999 99999998644321 1100111112211 2355699999999985 3458999999988876543
No 280
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.70 E-value=9.8e-15 Score=141.96 Aligned_cols=217 Identities=18% Similarity=0.187 Sum_probs=161.0
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH----HHHHcCCEEEEe
Q 014172 131 NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVIL 206 (429)
Q Consensus 131 ~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v 206 (429)
++....|.+.++++- ..+..+.++++..||..++.+++++||.|++++..|.+... ..+..|.++.++
T Consensus 62 nPT~~~lE~~~a~LE--------g~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~ 133 (396)
T COG0626 62 NPTRDALEEALAELE--------GGEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFV 133 (396)
T ss_pred CccHHHHHHHHHHhh--------CCCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEE
Confidence 344567777777763 35678999999999999999999999999999999987654 445678998888
Q ss_pred cCCCCCCCCCCHHHHHhhcc-cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccc
Q 014172 207 PTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (429)
Q Consensus 207 ~~~~~~~~~~d~e~l~~~l~-~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~ 285 (429)
+. -+.+.+++++. +++|+|++.+|.||+-.+.+ +++|+++|+++ ++++|+|+.|.--++. .
T Consensus 134 d~-------~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~D---I~~i~~~A~~~-g~~vvVDNTfatP~~q-------~ 195 (396)
T COG0626 134 DP-------GDDEALEAAIKEPNTKLVFLETPSNPLLEVPD---IPAIARLAKAY-GALVVVDNTFATPVLQ-------R 195 (396)
T ss_pred CC-------CChHHHHHHhcccCceEEEEeCCCCccccccc---HHHHHHHHHhc-CCEEEEECCccccccc-------C
Confidence 74 25666666666 59999999999999999999 99999999999 8999999999853321 1
Q ss_pred cCCCCCCceEEEeccChhccccc-ceeeEEEcCHH-HHHHHHHHhh-cccCCCchHHHHHHHHHHhcCCCChHHHHHHHH
Q 014172 286 SLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKH-FVAACNKIQS-QFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 362 (429)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~~~~G-~R~G~v~~~~~-~~~~l~~~~~-~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~ 362 (429)
.+ ..+..|++.|.+|.++-.+ .=.|.++++.+ +.+.+..... ..+...+++....+..-++ -+.-+.+
T Consensus 196 PL--~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlk-------TL~~Rm~ 266 (396)
T COG0626 196 PL--ELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRGLR-------TLALRME 266 (396)
T ss_pred hh--hcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhccc-------hHHHHHH
Confidence 11 1356699999999996333 33465665654 4444433333 3555667776555444433 3666777
Q ss_pred HHHHHHHHHHHHhccCCCce
Q 014172 363 AFRERRDFLVKSFGELEGVK 382 (429)
Q Consensus 363 ~~~~~r~~l~~~L~~l~g~~ 382 (429)
+..++...+.+.|++.|.++
T Consensus 267 ~~~~nA~~IA~~L~~~p~V~ 286 (396)
T COG0626 267 RHNENALKIAEFLADHPKVK 286 (396)
T ss_pred HHHHHHHHHHHHHhcCCCeE
Confidence 78888888999999877764
No 281
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.70 E-value=4.4e-15 Score=146.30 Aligned_cols=213 Identities=10% Similarity=0.131 Sum_probs=148.5
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChH----HHHHHcCCEEEEec
Q 014172 132 AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVILP 207 (429)
Q Consensus 132 ~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~ 207 (429)
+...+|.+.++++. | .+.++++++++.+|.+++.+++++||+|+++.+.|.... ..+...|+++++++
T Consensus 64 P~~~~lE~~la~le----g----~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd 135 (384)
T PRK06434 64 PTVQAFEEKYAVLE----N----AEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYID 135 (384)
T ss_pred hhHHHHHHHHHHHh----C----CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEEC
Confidence 33456777777764 2 346788888889999999999999999999988766544 55677899999999
Q ss_pred CCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccC
Q 014172 208 TRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL 287 (429)
Q Consensus 208 ~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~ 287 (429)
.++.+.+.+++ +++++|++.+|.|||+.+.+ +++|.++|+++ ++ ++|.++..- +.+ .++ .
T Consensus 136 ~~~~~~~~l~~--------~~tklv~~e~~snpt~~v~D---i~~I~~la~~~-~l--vVD~t~~s~-~~~---~pl-~- 195 (384)
T PRK06434 136 TDRLNSLDFDP--------SNYDLIYAESITNPTLKVPD---IKNVSSFCHEN-DV--IVDATFASP-YNQ---NPL-D- 195 (384)
T ss_pred CCChhheeecC--------CCeeEEEEEcCCCCCceeec---HHHHHHHHHHc-Ce--EEECCCCCc-ccC---Cch-h-
Confidence 86433332221 26899999999999999988 99999999999 74 459997431 111 111 1
Q ss_pred CCCCCceEEEeccChhccccc-ceeeEEEc-CHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 014172 288 PGMWERTLTVNGFSKAFAMTG-WRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFR 365 (429)
Q Consensus 288 ~~~~~~~i~~~S~SK~~~~~G-~R~G~v~~-~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~ 365 (429)
.+-.+++.|.+|.++-+| .=.|.+++ ++++.+.++......+...+.+....+..- -+.+..+.++.+
T Consensus 196 ---~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~g-------L~tL~~R~~r~~ 265 (384)
T PRK06434 196 ---LGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRG-------LKTLGLRMEKHN 265 (384)
T ss_pred ---cCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhC-------CCcHHHHHHHHH
Confidence 245599999999996434 33577766 456666666554444444555433322222 234667777778
Q ss_pred HHHHHHHHHhccCCCce
Q 014172 366 ERRDFLVKSFGELEGVK 382 (429)
Q Consensus 366 ~~r~~l~~~L~~l~g~~ 382 (429)
++...+.+.|++.|.++
T Consensus 266 ~~a~~~a~~L~~~p~v~ 282 (384)
T PRK06434 266 KNGMELARFLRDSKKIS 282 (384)
T ss_pred HHHHHHHHHHHcCCCcc
Confidence 88888899998887663
No 282
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.69 E-value=1.5e-14 Score=143.89 Aligned_cols=283 Identities=14% Similarity=0.133 Sum_probs=182.4
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.+||+..|. ..++. +|++.+++.+.+.+....+ .....++...+++++.+.. ..+.+++++++++++.
T Consensus 34 dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~--~~~~~~~~~~la~~l~~~~----~~~~v~f~~SGseA~e 107 (395)
T PRK03715 34 NGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPS--PAFYNEPMAKLAGLLTQHS----CFDKVFFANSGAEANE 107 (395)
T ss_pred CCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhccccc--ccccCHHHHHHHHHHhhcc----CCCEEEEeCCcHHHHH
Confidence 577899998764 33443 6899999999886532222 2234678888999987542 2368999999999999
Q ss_pred HHHHHhc------CCC-CEEEEcCCCCCChHH-HHHHcCCEEEE---ecCCCCCCC----CCCHHHHHhhcccCCcEEEE
Q 014172 170 QAVLAVC------SPG-DEVIIPAPFWVSYPE-MARIADATPVI---LPTRISENF----LLDPKVLESKLTEKSRLLIL 234 (429)
Q Consensus 170 ~~l~~l~------~~g-d~Vlv~~p~y~~~~~-~~~~~g~~~~~---v~~~~~~~~----~~d~e~l~~~l~~~~~~i~l 234 (429)
.+++... ++| ..|+..+.+|++... .+...|..... .|.. .++ ..|++.+++.+.+++.+|++
T Consensus 108 ~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~l~~~~aavi~ 185 (395)
T PRK03715 108 GAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQV--PGFPKAELNDIASVEKLITDKTVAVML 185 (395)
T ss_pred HHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCC--CCceeeCCchHHHHHHHcCCCceEEEE
Confidence 9988874 123 568888887776543 44444432111 1111 011 13789999999877888877
Q ss_pred cCCCCCccCCC-CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeE
Q 014172 235 CSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY 313 (429)
Q Consensus 235 ~~p~NPtG~~~-~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~ 313 (429)
...++..|... +.+.+++|.++|++| |+++|.||++.++...|... ....+.-..| +.+|+|.++ .|..+|.
T Consensus 186 Epv~~~gG~~~~~~~~l~~l~~l~~~~-~~llI~DEv~tG~GRtG~~~-a~~~~gv~PD----i~t~gK~lg-~G~p~~a 258 (395)
T PRK03715 186 EPVQGEGGVIPATREFMQQLRALTKQH-GLLLIVDEVQTGCGRTGTLF-AYELSGIEPD----IMTLGKGIG-GGVPLAA 258 (395)
T ss_pred eCCcCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCCCcchh-hHhhcCCCCc----eeeehhhhh-CCcceEE
Confidence 76677778765 688899999999999 99999999999753333211 1111111112 567899998 7899999
Q ss_pred EEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC---CCceeecCCceE
Q 014172 314 IAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL---EGVKMSEPQGAF 390 (429)
Q Consensus 314 v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l---~g~~~~~p~~~~ 390 (429)
+++++++.. +.......+++.++++.+++.+.|+. .++ +++.+..+++-+++.+.|+++ .++..++..| .
T Consensus 259 v~~~~~i~~-~~~~~~~~T~~g~pl~~aaala~L~~---l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~i~~vrG~G-l 331 (395)
T PRK03715 259 LLAKAEVAV-FEAGDQGGTYNGNPLMTAVGVAVISQ---LLA--PGFLEGVRARGEYLKEKLLELSEERGLEGERGEG-L 331 (395)
T ss_pred EEEcccccc-ccCCCcCCCCCCCHHHHHHHHHHHHH---HHh--ccHHHHHHHHHHHHHHHHHHHhhcCCcCeEEcce-e
Confidence 999888752 22111223445677888888888774 121 234555555666666666543 1344344444 4
Q ss_pred EEEEecC
Q 014172 391 YLFIDFS 397 (429)
Q Consensus 391 ~~~~~l~ 397 (429)
.+-+.+.
T Consensus 332 m~~i~l~ 338 (395)
T PRK03715 332 LRALLLG 338 (395)
T ss_pred EEEEEec
Confidence 4556664
No 283
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.68 E-value=3.5e-14 Score=134.17 Aligned_cols=301 Identities=16% Similarity=0.121 Sum_probs=203.4
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCC------CCC-CCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGF------TRY-TPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~------~~Y-~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
..|.|=.-++- +++.+.+++-..+.+.+ .+| +...-..++.+...++.++.||. +--||-..+|+.. .
T Consensus 27 ~~ieLIASEN~--~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga--~~anVQPhSGs~A-N 101 (413)
T COG0112 27 EHIELIASENF--TSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGA--EYANVQPHSGSQA-N 101 (413)
T ss_pred hceeeeecccc--CCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCC--CccccCCCCchHH-H
Confidence 57888887876 45677777777665421 233 33333455666666888888884 4457777777665 5
Q ss_pred HHHHHHhcCCCCEEEEcCCCCCChHHHH---HHcC--CEEEEecCCCCCCCCCCHHHHHhhcc-cCCcEEEEcCCCCCcc
Q 014172 169 LQAVLAVCSPGDEVIIPAPFWVSYPEMA---RIAD--ATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTG 242 (429)
Q Consensus 169 ~~~l~~l~~~gd~Vlv~~p~y~~~~~~~---~~~g--~~~~~v~~~~~~~~~~d~e~l~~~l~-~~~~~i~l~~p~NPtG 242 (429)
..++.++++|||+|+-.+-.+.++...- ...| .+++.++++++ +..+|.|++++... .++|+|+.-.-. .-
T Consensus 102 ~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~e-t~~IDyD~~~k~a~e~kPK~ii~G~Sa--Y~ 178 (413)
T COG0112 102 QAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPE-TGLIDYDEVEKLAKEVKPKLIIAGGSA--YS 178 (413)
T ss_pred HHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccc-cCccCHHHHHHHHHHhCCCEEEECccc--cc
Confidence 5589999999999998888777766433 2223 36667777654 46799999999875 489988752211 22
Q ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCH-HHH
Q 014172 243 SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK-HFV 321 (429)
Q Consensus 243 ~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~-~~~ 321 (429)
..++ ++++.++|++. |.+++.|-+|-...-.+..+++... ...|+.+|.+|+| +|.|-|.+++++ ++.
T Consensus 179 r~id---~~~~reIad~V-GA~L~~DmAHiaGLVA~G~~p~P~~-----~AdvVTtTTHKTl--rGPrGG~Il~~~eel~ 247 (413)
T COG0112 179 RPID---FKRFREIADEV-GAYLMVDMAHVAGLIAGGVHPNPLP-----HADVVTTTTHKTL--RGPRGGIILTNDEELA 247 (413)
T ss_pred cccC---HHHHHHHHHHh-CceEEehHHHHHHHHhcccCCCCCC-----ccceEeCCcccCC--CCCCceEEEeccHHHH
Confidence 3445 88899999999 9999999998743333323332222 2348999999998 799999999985 888
Q ss_pred HHHHHHhhcccCCCchHHHHHH-HHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeec-CCceEEEEEecCCc
Q 014172 322 AACNKIQSQFTSGASSISQKAG-VAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-PQGAFYLFIDFSTY 399 (429)
Q Consensus 322 ~~l~~~~~~~~~~~~~~~q~aa-~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~-p~~~~~~~~~l~~~ 399 (429)
+.+.+...+...+-+..-..|+ ..++... .+..+++..+...++.+.|.+.|.+. |++++. ..-+.-+.+++...
T Consensus 248 kkin~aVFPg~qggpl~HviAakaVa~~Ea--l~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsGgTdnHl~lVDl~~~ 324 (413)
T COG0112 248 KKINSAVFPGLQGGPLMHVIAAKAVAFKEA--LEPEFKEYAKQVVKNAKALAEALKER-GFKVVSGGTDNHLVLVDLRSK 324 (413)
T ss_pred HHhhhhcCCccCCChHHHHHHHHHHHHHHH--cChhHHHHHHHHHHHHHHHHHHHHHc-CCeEecCCccceEEEEEcccC
Confidence 8888765555544333333332 2233321 23446778888888999999999987 888874 22245577888632
Q ss_pred cCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 400 YGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
+ -...-++++|++.||.++
T Consensus 325 -~----------~~Gk~ae~~L~~~~It~N 343 (413)
T COG0112 325 -G----------LTGKKAEAALERAGITVN 343 (413)
T ss_pred -C----------CCHHHHHHHHHHcCEeec
Confidence 1 245667778888899875
No 284
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.68 E-value=1.6e-14 Score=155.27 Aligned_cols=276 Identities=19% Similarity=0.203 Sum_probs=193.5
Q ss_pred CCCCCC---CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChH----HHHHHHHHHhcCC-CC----EEEEcCCCCCChH
Q 014172 126 TRYTPN---AGTLELRSAICHKLKEENGLSYTPDQILVSNGAK----QSILQAVLAVCSP-GD----EVIIPAPFWVSYP 193 (429)
Q Consensus 126 ~~Y~~~---~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~----~al~~~l~~l~~~-gd----~Vlv~~p~y~~~~ 193 (429)
+-|.|. +|+.++...+.+++.+..|. +.|+++++++ +++.++++++.++ || .|+++...|.+..
T Consensus 555 hp~~p~~~~~g~~~~~~~~r~~la~i~g~----~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~ 630 (993)
T PLN02414 555 HPFAPVDQAQGYQEMFEDLGDLLCEITGF----DSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNP 630 (993)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCC----CeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCH
Confidence 445553 57766666666777666663 8999999988 8999999999866 88 8999999999999
Q ss_pred HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc---CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccC
Q 014172 194 EMARIADATPVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 270 (429)
Q Consensus 194 ~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~---~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Dea 270 (429)
..+...|++++.++++. ++.+|+++|++++++ ++++|++++|+|-+|...+ +++|+++|+++ |.++++|.+
T Consensus 631 a~a~~~G~~vv~v~~d~--~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~---I~eI~~iah~~-Galv~vDgA 704 (993)
T PLN02414 631 ASAAMCGMKIVVVGTDA--KGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEG---IDEICDIIHDN-GGQVYMDGA 704 (993)
T ss_pred HHHHHCCCEEEEeccCC--CCCcCHHHHHHHHhccCCCeEEEEEECCCccccccch---HHHHHHHHHHc-CCEEEEEec
Confidence 88888999999999864 346999999999984 6789999999999999988 99999999999 999999999
Q ss_pred CcccccCCCCCCccccCCCCCCceEEEeccChhcc----cccceeeEEEcCHHHHHHHHHHh-----------hcccCCC
Q 014172 271 YEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA----MTGWRLGYIAGPKHFVAACNKIQ-----------SQFTSGA 335 (429)
Q Consensus 271 y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~----~~G~R~G~v~~~~~~~~~l~~~~-----------~~~~~~~ 335 (429)
+..-..+ ... +...+-+++++|.+|+|+ ..|..+|++.+.++++..+-... ...+.|.
T Consensus 705 q~~a~~~---l~~----p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt 777 (993)
T PLN02414 705 NMNAQVG---LTS----PGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGT 777 (993)
T ss_pred CHHhccC---cCC----ccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCC
Confidence 8541100 111 223466699999999775 34566999988887665542210 1111122
Q ss_pred ---ch----HHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEE--EEecCCccCCcccC
Q 014172 336 ---SS----ISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYL--FIDFSTYYGSEAEG 406 (429)
Q Consensus 336 ---~~----~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~--~~~l~~~~~~~~~~ 406 (429)
.. ....++..++.. .+.+.+++..+....+.+++.++|++..++.+..|.+.+|- .++++... ...|
T Consensus 778 ~~~a~~g~al~l~~A~~yi~~--lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l~--~~~g 853 (993)
T PLN02414 778 ISAAPWGSALILPISYTYIAM--MGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPFK--NTAG 853 (993)
T ss_pred ccchhhhhHHHHHHHHHHHHH--HCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEeccccc--cccC
Confidence 11 222233333332 14677888888888899999999987445655555554321 23443210 0001
Q ss_pred CCCCCChHHHHHHHHHhCCee
Q 014172 407 FGKIENSESLCRYLLDKAQVL 427 (429)
Q Consensus 407 ~~~~~~~~~~~~~Ll~~~gV~ 427 (429)
.+..+++++|++ +|+.
T Consensus 854 ----~~~~di~krL~d-~Gih 869 (993)
T PLN02414 854 ----IEPEDVAKRLMD-YGFH 869 (993)
T ss_pred ----CCHHHHHHHHHH-cCcE
Confidence 356899999994 4764
No 285
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.68 E-value=1.3e-14 Score=156.32 Aligned_cols=304 Identities=14% Similarity=0.105 Sum_probs=187.6
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcCC----CCCCCCC----CCHHHHHHHHHHHHhhcCCCCCCC--cEEEecChHH
Q 014172 97 VIRLAAGEPDFDTPVLIAEAGINAIREGF----TRYTPNA----GTLELRSAICHKLKEENGLSYTPD--QILVSNGAKQ 166 (429)
Q Consensus 97 ~i~L~~g~~~~~~p~~v~~a~~~~~~~~~----~~Y~~~~----G~~~lr~~ia~~l~~~~g~~~~~~--~i~~t~G~~~ 166 (429)
.|.|+.+-..+.+|..+.+++.+.+.... ..|.... -..+.|+.+++++ | .+++ .|++|+|+|+
T Consensus 35 ~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~l----g--a~~~~~~VvFtsnaT~ 108 (805)
T PLN02724 35 VVYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYF----N--APPSDYACVFTSGATA 108 (805)
T ss_pred CEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHh----C--CCccceEEEEeCChHH
Confidence 68888887665555666666655543211 1111111 1235556666655 4 3443 5899999999
Q ss_pred HHHHHHHHh-cCCCCEEEEcCCCCCChHHH---HHHcCCEEEEecCCCC------CCCCCCH--HHHHhhc---------
Q 014172 167 SILQAVLAV-CSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRIS------ENFLLDP--KVLESKL--------- 225 (429)
Q Consensus 167 al~~~l~~l-~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~------~~~~~d~--e~l~~~l--------- 225 (429)
++++++..+ .++||+|++..-.|.+.... ++..|++++.++++.+ ....+++ +.+++.+
T Consensus 109 alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~ 188 (805)
T PLN02724 109 ALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKRED 188 (805)
T ss_pred HHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccc
Confidence 999998887 67899999987777765543 3456999999987521 1122333 5566653
Q ss_pred -ccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhC----CCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEecc
Q 014172 226 -TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH----PRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGF 300 (429)
Q Consensus 226 -~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~----~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 300 (429)
.+++++|.+++.+|-||.++|.+.++++.+.++++ .++++++|.++.. +..+..+..+ +..+++.|+
T Consensus 189 ~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~----g~~piDv~~~----~~Dfl~~S~ 260 (805)
T PLN02724 189 DGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGC----GTSPPDLSRY----PADFVVVSF 260 (805)
T ss_pred cCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhc----CCCCCChhhc----CCCEEEEec
Confidence 24568999999999999999954333333322211 1368999999875 4434444433 455999999
Q ss_pred Chhcc-cccceeeEEEcCHHHHHHHHHHhh------------------------cccCCCchHHHHHHHHHHhcCCCChH
Q 014172 301 SKAFA-MTGWRLGYIAGPKHFVAACNKIQS------------------------QFTSGASSISQKAGVAALGLGYAGGE 355 (429)
Q Consensus 301 SK~~~-~~G~R~G~v~~~~~~~~~l~~~~~------------------------~~~~~~~~~~q~aa~~~l~~~~~~~~ 355 (429)
+|.+| ..| +|++++.+++.+.+..... ....+++..+..++.++++. ..+
T Consensus 261 HK~~GgP~G--~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~---l~~ 335 (805)
T PLN02724 261 YKIFGYPTG--LGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKL---LNR 335 (805)
T ss_pred ceeccCCCC--ceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHH---HHH
Confidence 99997 334 8999988877665542110 01123444455555556553 122
Q ss_pred -HHHHHHHHHHHHHHHHHHHhccCC------CceeecCC---------ceEEEEEecCCccCCcccCCCCCCChHHHHHH
Q 014172 356 -VVSKMVKAFRERRDFLVKSFGELE------GVKMSEPQ---------GAFYLFIDFSTYYGSEAEGFGKIENSESLCRY 419 (429)
Q Consensus 356 -~~~~~~~~~~~~r~~l~~~L~~l~------g~~~~~p~---------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 419 (429)
.++.+.++.++.++++.+.|++++ +++++.+. ++. +.+.+.+.-+ . .-....+.+
T Consensus 336 ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~i-vsFnv~~~~~-------~-~v~~~~v~~ 406 (805)
T PLN02724 336 LTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPI-VTFNLKRADG-------S-WVGHREVEK 406 (805)
T ss_pred hChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCE-EEEEEEcCCC-------C-EeCHHHHHH
Confidence 356677888888999999998875 47776442 344 4455543200 0 012344567
Q ss_pred HHHhCCeec
Q 014172 420 LLDKAQVLL 428 (429)
Q Consensus 420 Ll~~~gV~v 428 (429)
|++++||.+
T Consensus 407 l~~~~gI~v 415 (805)
T PLN02724 407 LASLSGIQL 415 (805)
T ss_pred HHHhcCcEE
Confidence 777788876
No 286
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.67 E-value=4.9e-14 Score=142.24 Aligned_cols=317 Identities=16% Similarity=0.169 Sum_probs=186.6
Q ss_pred cCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..||+..|.. .++- +|.+.+++.+++.+.. .++......+....+++.+.+..+.. ..+.|++++++++++.
T Consensus 40 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~-~~~~~~~~~~~~~~lae~L~~~~p~~-~~~~v~f~~SGseA~e 117 (445)
T PRK08593 40 DGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFI-HYTPAYMYHEPLVRLAKKLCELAPGD-FEKRVTFGLSGSDAND 117 (445)
T ss_pred CCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhcc-CccccccCCHHHHHHHHHHHHhCCCC-CCCEEEECCchHHHHH
Confidence 5788999987753 3444 7999999999987532 12111122455566666666544311 1258999999999999
Q ss_pred HHHHHhcC-CC-CEEEEcCCCCCChHHHHH-HcCC-------------EEEEecCCCCCC--CC-CC-------HHHHHh
Q 014172 170 QAVLAVCS-PG-DEVIIPAPFWVSYPEMAR-IADA-------------TPVILPTRISEN--FL-LD-------PKVLES 223 (429)
Q Consensus 170 ~~l~~l~~-~g-d~Vlv~~p~y~~~~~~~~-~~g~-------------~~~~v~~~~~~~--~~-~d-------~e~l~~ 223 (429)
.+++.... .| ..|+..+-+|.+....+. ..+. .++.+|...... +. .+ ++.+++
T Consensus 118 ~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 197 (445)
T PRK08593 118 GIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKE 197 (445)
T ss_pred HHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHH
Confidence 99886431 23 568888887877543332 2221 123343321100 00 01 234444
Q ss_pred hcc-----cCCcEEEEcCCCCCccCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEE
Q 014172 224 KLT-----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTV 297 (429)
Q Consensus 224 ~l~-----~~~~~i~l~~p~NPtG~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~ 297 (429)
.+. +++.+|++...++..|.+ .+.+.+++|.++|++| |+++|.||++..|...|.. .....+.-..+ +
T Consensus 198 ~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~-g~llI~DEv~tg~GrtG~~-~a~~~~gv~pD----i 271 (445)
T PRK08593 198 MFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREH-GILFAVDDIQQGLGRTGKW-SSISHFNITPD----L 271 (445)
T ss_pred HHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhCCCcCchH-HHHHhcCCCCC----E
Confidence 332 356677776667777876 6888999999999999 9999999999876443321 11111111112 4
Q ss_pred eccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 014172 298 NGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 377 (429)
Q Consensus 298 ~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 377 (429)
.+|+|.++ .|+++|++++++++++.+......++++.++++++++.+.|+. .++ +++.+..+++-+++.+.|++
T Consensus 272 ~t~gK~l~-~G~p~gav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~---l~~--~~l~~~~~~~g~~l~~~L~~ 345 (445)
T PRK08593 272 MSFGKSLA-GGMPMSAIVGRKEIMESLEAPAHLFTTGANPVSCAAALATIDM---IED--ESLLQRSAEKGEYARKRFDQ 345 (445)
T ss_pred eeeccccc-CCcccEEEEEcHHHHhhhccCCCCCCCCCCHHHHHHHHHHHHH---HHh--ccHHHHHHHHHHHHHHHHHH
Confidence 57999998 8899999999999998875433345667788888888888875 221 12333334444444444443
Q ss_pred ----CCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 378 ----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 378 ----l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+.+.-++..|-+ +.+.+...... ..........++..|+++ ||.+
T Consensus 346 l~~~~~~v~~vrG~Gl~-~gi~l~~~~~~---~~~~~~~~~~~~~~~~~~-Gv~~ 395 (445)
T PRK08593 346 WVSKYNFVGDVRGYGLS-IGIDIVSDKKL---KTRDNEAALKICNYCFEH-GVVI 395 (445)
T ss_pred HHhcCCcEEEEeccceE-EEEEEecCCCc---CCCcHHHHHHHHHHHHHC-CeEE
Confidence 4333333445544 44444210000 000001245688887775 8865
No 287
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.67 E-value=4.9e-14 Score=142.28 Aligned_cols=290 Identities=15% Similarity=0.113 Sum_probs=176.3
Q ss_pred hcCCCeEEcCCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCc-EEEecChHHH
Q 014172 92 QAGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQ-ILVSNGAKQS 167 (429)
Q Consensus 92 ~~g~~~i~L~~g~~~--~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~-i~~t~G~~~a 167 (429)
..|+..||+..|... ++- +|++.+++.+++.+....++ ..-..+.+..+|+.+.+..+....... ++++++++++
T Consensus 36 ~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~-~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA 114 (442)
T TIGR00709 36 VEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHT-LDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADA 114 (442)
T ss_pred CCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccc-cccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHH
Confidence 357889999888633 333 78999999998876322111 111245666777777665431101124 5566899999
Q ss_pred HHHHHHHhcC-CC-CEEEEcCCCCCChHHHHHHc-CC------------EEEEecCCCCCC--CC----CCH----HHHH
Q 014172 168 ILQAVLAVCS-PG-DEVIIPAPFWVSYPEMARIA-DA------------TPVILPTRISEN--FL----LDP----KVLE 222 (429)
Q Consensus 168 l~~~l~~l~~-~g-d~Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~~~--~~----~d~----e~l~ 222 (429)
.+.+++.... .| .+|+...-+|.+....+... |. .+..++...... +. .+. +.++
T Consensus 115 ~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (442)
T TIGR00709 115 VEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFE 194 (442)
T ss_pred HHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHH
Confidence 9998887532 23 67888888888876444432 21 122333211000 00 011 1233
Q ss_pred hhcc------cCCcEEEEcCCC-CCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceE
Q 014172 223 SKLT------EKSRLLILCSPS-NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 295 (429)
Q Consensus 223 ~~l~------~~~~~i~l~~p~-NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i 295 (429)
+.+. .++.++++...+ |+...+++++.+++|.++|++| |+++|.||+|.+|.+.|. ......+....| +
T Consensus 195 ~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~-g~llI~DEV~tGfGRtG~-~~a~~~~gv~PD--i 270 (442)
T TIGR00709 195 NFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKH-DIKLILDEVQAGFGRSGT-MFAFEHAGIEPD--F 270 (442)
T ss_pred HHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCCCCc-hhHHHHcCCCCc--E
Confidence 3332 345666664444 4444568999999999999999 999999999998865553 222222221112 3
Q ss_pred EEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHh
Q 014172 296 TVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSF 375 (429)
Q Consensus 296 ~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L 375 (429)
++ ++|.++ .|+++|+++++++ ++.+.......+++.++++++++.+.|+. .++ +++.+..+++.+++.+.|
T Consensus 271 v~--~gK~l~-~G~Pigav~~~~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~---i~~--~~l~~~~~~~g~~l~~~L 341 (442)
T TIGR00709 271 VV--MSKAVG-GGLPLAVLLIAPE-FDAWQPAGHTGTFRGNQLAMVTGTEALNY---WKD--DNLAQNAQERGERITSFL 341 (442)
T ss_pred EE--Eccccc-CCcccEEEEEchH-HhccCCCcCCCCCCcCHHHHHHHHHHHHH---HHh--cCHHHHHHHHHHHHHHHH
Confidence 33 899999 5999999999888 45443222345667899999999999974 121 244556666777777777
Q ss_pred ccC----CCceeecCCceEEEEEec
Q 014172 376 GEL----EGVKMSEPQGAFYLFIDF 396 (429)
Q Consensus 376 ~~l----~g~~~~~p~~~~~~~~~l 396 (429)
+++ +.+.-++..|-| +-+.+
T Consensus 342 ~~l~~~~~~v~~vrG~Gl~-~~ie~ 365 (442)
T TIGR00709 342 DDMIKEHPCIGNVRGRGLM-QGIMI 365 (442)
T ss_pred HHHHHhCCCeeeeeccceE-EEEEE
Confidence 653 323333455544 55555
No 288
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.67 E-value=4e-17 Score=154.58 Aligned_cols=251 Identities=20% Similarity=0.227 Sum_probs=166.5
Q ss_pred ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCC
Q 014172 109 TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF 188 (429)
Q Consensus 109 ~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~ 188 (429)
+.+++.+++.++.. +...|+.+....+|++.+++.+. .+..++++++|.+...+++++++|++.|++..++
T Consensus 7 ~~~~m~~a~~~a~~-gd~~Yg~D~~~~~l~~~i~~l~g--------~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~a 77 (290)
T PF01212_consen 7 PTPAMLEAMAAANV-GDDAYGEDPTTARLEERIAELFG--------KEAALFVPSGTMANQLALRAHLRPGESVICADTA 77 (290)
T ss_dssp S-HHEEHHHHHTTS-B-CCTTSSHHHHHHHHHHHHHHT--------SSEEEEESSHHHHHHHHHHHHHHTTEEEEEETTE
T ss_pred CCHHHHHHHHcccc-CCcccCCChhHHHHHHHHHHHcC--------CCEEEEeCCCChHHHHHHHHHHhcCCceeccccc
Confidence 56788888855543 33468877777788888888763 4566789999999999999999999999999987
Q ss_pred CCCh---HHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------CCcEEEEcCCCCC-ccCCCCHHHHHHHHHHHH
Q 014172 189 WVSY---PEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNP-TGSVYPKNLLDEIARIVA 258 (429)
Q Consensus 189 y~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~~~~i~l~~p~NP-tG~~~~~~~l~~I~~~a~ 258 (429)
|... .......|++++.++... +..+|+++|++.+.. ++++|+|.+|+|. -|.+++.+++++|.++|+
T Consensus 78 Hi~~~E~ga~~~~~G~~~~~l~~~~--~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~ 155 (290)
T PF01212_consen 78 HIHFDETGAIEELSGAKLIPLPSDD--DGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAR 155 (290)
T ss_dssp HHHHSSTTHHHHHTTCEEEEEBECT--GTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHH
T ss_pred eeeeeccchhhHhcCcEEEECCCcc--cCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHH
Confidence 6532 234466999999998643 256999999999864 5789999999995 389999999999999999
Q ss_pred hCCCeEEEEccCCcc--cccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCc
Q 014172 259 KHPRLLVLSDEIYEH--IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGAS 336 (429)
Q Consensus 259 ~~~~i~vi~Deay~~--~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~ 336 (429)
+| |+.++.|.+--. ..+.+ .++..+. ..-+++..|++|.+++++ -+.+++++++++....+.........
T Consensus 156 ~~-gl~lhmDGARl~~a~~~~~---~~~~e~~--~~~D~v~~~~tK~~g~~~--Gavl~~~~~~i~~~~~~~k~~gg~~~ 227 (290)
T PF01212_consen 156 EH-GLPLHMDGARLANAAAALG---VSLAEIA--AGADSVSFGGTKNGGAPG--GAVLAGNKEFIAKARRQRKRLGGGMR 227 (290)
T ss_dssp HH-T-EEEEEETTHHHHHCHHH---HHHHHHH--TTSSEEEEETTSTT-SSS--EEEEEESHHHHHHHHHHHHHHTHHHH
T ss_pred hC-ceEEEEehhhHHHhhhccc---ccHHHHh--hhCCEEEEEEEccccccc--ceEEEechHHHHHHHHHHHHhccCee
Confidence 99 999999988431 11111 1222222 233477888999998765 36677899877665554433322111
Q ss_pred --hHHHH------HHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC
Q 014172 337 --SISQK------AGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (429)
Q Consensus 337 --~~~q~------aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p 386 (429)
.+... ++...++ .|+ ....+..++.+.+.+.|+.+ |..+..|
T Consensus 228 ~~G~~~a~~~~~~~~l~~l~------~~~-~~~~~~~~~A~~La~~l~~~-~~~~~~~ 277 (290)
T PF01212_consen 228 QAGVLAAAELYQFAALRALE------LWL-ERARHANAMAKRLAAGLEAL-GGVLPRP 277 (290)
T ss_dssp HTTHHHHHHHHHHHHHCHEE------CSH-HHHHCHHHHHHCHHHCHHEE-CEEEETT
T ss_pred ecceeeeechhhHHHHHHHH------hhH-HHHHHHHHHHHHHHHHHHHC-CCcccCC
Confidence 11111 2222222 233 34445556677888899888 4444433
No 289
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.67 E-value=4.2e-14 Score=141.94 Aligned_cols=307 Identities=15% Similarity=0.133 Sum_probs=184.9
Q ss_pred cCCCeEEcCCC--CCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAG--EPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g--~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..+|+..| ...++- +|.+.+++.+.+.+.. +.......+.+..+|+.+.+.... ..+.++++++++++++
T Consensus 73 dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~--~~~~~~~~~~~~~lAe~L~~~~p~--~~~~v~f~~SGsEA~e 148 (442)
T TIGR03372 73 QGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQP--LHSQELLDPLRALLAKTLAALTPG--KLKYSFFCNSGTESVE 148 (442)
T ss_pred CCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCC--CcccccCCHHHHHHHHHHHHhCCC--CcCEEEEeCCchHHHH
Confidence 57789999888 445554 7889999999887532 111112245566677776654331 2257999999999999
Q ss_pred HHHHHhcC----CC-CEEEEcCCCCCChHHHHHHcCCEEE----EecCCCCCC--CCCCHHHHHhhcc------cCCcEE
Q 014172 170 QAVLAVCS----PG-DEVIIPAPFWVSYPEMARIADATPV----ILPTRISEN--FLLDPKVLESKLT------EKSRLL 232 (429)
Q Consensus 170 ~~l~~l~~----~g-d~Vlv~~p~y~~~~~~~~~~g~~~~----~v~~~~~~~--~~~d~e~l~~~l~------~~~~~i 232 (429)
.+++.... .| ..|+....+|.+....+.....+.. +.|..+.-. --.|.+.+++.++ .+..+|
T Consensus 149 ~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAav 228 (442)
T TIGR03372 149 AALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAI 228 (442)
T ss_pred HHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEE
Confidence 99886532 24 5788888888876544333221110 111110000 0026777776663 234566
Q ss_pred EEcCCCCCccCCC-CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccccc-ce
Q 014172 233 ILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-WR 310 (429)
Q Consensus 233 ~l~~p~NPtG~~~-~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~R 310 (429)
++...+...|... +++.+++|.++|++| |+++|.||++.+|-..|. ...+..+.-..| +-+|+|.+| .| ..
T Consensus 229 IvEpv~g~gG~~~p~~~yl~~l~~lc~~~-g~llI~DEV~tG~GRtG~-~~a~e~~gv~PD----ivt~gK~lg-~G~~P 301 (442)
T TIGR03372 229 ILEPIQGEGGVILPPEGYLPAVRALCDEF-GALLILDEVQTGMGRTGK-MFACEHEGVQPD----ILCLAKALG-GGVMP 301 (442)
T ss_pred EEeCccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEeecccCCCcccc-chhhhhcCCCCC----eeeehhhhc-CCccc
Confidence 6655566667655 577899999999999 999999999987533332 111111211112 345999998 78 68
Q ss_pred eeEEEcCHHHHHHHHHH--hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc----CC-Ccee
Q 014172 311 LGYIAGPKHFVAACNKI--QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE----LE-GVKM 383 (429)
Q Consensus 311 ~G~v~~~~~~~~~l~~~--~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----l~-g~~~ 383 (429)
+|.+++.+++.+.+... ....+++.++++.+++.+.|+. .++ +++.+..++.-+++.+.|++ .| .+.-
T Consensus 302 igavv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~---i~~--~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~ 376 (442)
T TIGR03372 302 IGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINE---LLE--KNLPAQAAIKGDFLLDGFQQLAAEYPDLIIE 376 (442)
T ss_pred ceEEEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHH---HHh--ccHHHHHHHHHHHHHHHHHHHHHhCCCceEE
Confidence 99999999988877421 2234555678888888888874 111 11223333333444444433 43 2333
Q ss_pred ecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 384 SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 384 ~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++.. |.++-+.+... .....+++.|+++ ||.+
T Consensus 377 vRG~-Gl~~giel~~~-----------~~~~~i~~~l~~~-Gvl~ 408 (442)
T TIGR03372 377 ARGK-GLLMAIEFRDN-----------EIGYAFAKELFQQ-NILV 408 (442)
T ss_pred Eecc-eEEEEEEeCCh-----------HHHHHHHHHHHHC-CcEE
Confidence 3444 44466766431 1346788888876 8875
No 290
>PRK06541 hypothetical protein; Provisional
Probab=99.67 E-value=3.9e-14 Score=143.34 Aligned_cols=288 Identities=15% Similarity=0.152 Sum_probs=179.3
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..||+..|. ..++- +|.+.+++.+.+.+..+ +.......+....+++.+.+..+. ..+.|+++++++++++
T Consensus 50 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~-~~~~~~~~~~~~~la~~l~~~~p~--~~~~v~f~~sGseAve 126 (460)
T PRK06541 50 RGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAF-FPLWSYAHPPAIELAERLAALAPG--DLNRVFFTTGGSEAVE 126 (460)
T ss_pred CCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcC-ccccccCCHHHHHHHHHHHHhCCC--CcCEEEEcCCcHHHHH
Confidence 578899998885 33444 78999999999875321 111112234555666666654321 2368999999999999
Q ss_pred HHHHHhcC-------C-CCEEEEcCCCCCChHHHHHHc-CC------------EEEEecCCCCC---CCCCC--------
Q 014172 170 QAVLAVCS-------P-GDEVIIPAPFWVSYPEMARIA-DA------------TPVILPTRISE---NFLLD-------- 217 (429)
Q Consensus 170 ~~l~~l~~-------~-gd~Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~~---~~~~d-------- 217 (429)
.+++.... + ..+|+...-+|.+....+... |. .+..+|..... .+.-+
T Consensus 127 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (460)
T PRK06541 127 SAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWA 206 (460)
T ss_pred HHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHH
Confidence 98886531 1 267888888888765433321 11 12223321100 01112
Q ss_pred HHHHHhhcc---cCCcEEEEcCC-CCCccCCCC-HHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCC
Q 014172 218 PKVLESKLT---EKSRLLILCSP-SNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 292 (429)
Q Consensus 218 ~e~l~~~l~---~~~~~i~l~~p-~NPtG~~~~-~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~ 292 (429)
++.+++.+. ++..+.+|..| ++++|.+.+ .+.+++|.++|++| |+++|.||+|..|-..|.. .....+.-..|
T Consensus 207 ~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~-g~llI~DEV~tGfGR~G~~-~a~~~~gv~PD 284 (460)
T PRK06541 207 ADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRY-DVLLVSDEVICAFGRLGEM-FGCERFGYVPD 284 (460)
T ss_pred HHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCcCchh-hhhhhcCCCCC
Confidence 356777764 24445555556 889998765 88899999999999 9999999999765222221 11111111112
Q ss_pred ceEEEeccChhcccccc-eeeEEEcCHHHHHHHHHHh----hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 014172 293 RTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNKIQ----SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 367 (429)
Q Consensus 293 ~~i~~~S~SK~~~~~G~-R~G~v~~~~~~~~~l~~~~----~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~ 367 (429)
+.+|+|.++ .|+ ++|++++++++++.+.... ...+++.++++.+++.+.|+. .+ -+++.+..+++
T Consensus 285 ----ivt~gK~l~-~G~~pigav~~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~---l~--~~~~~~~~~~~ 354 (460)
T PRK06541 285 ----IITCAKGIT-SGYSPLGAMIASDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDI---FE--REGLLDHVRDN 354 (460)
T ss_pred ----EEEeccccc-CCccceeEEEEcHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHH---HH--hccHHHHHHHH
Confidence 335999999 897 9999999999988875421 123555677888888777764 11 12456777788
Q ss_pred HHHHHHHhccCCC---ceeecCCceEEEEEec
Q 014172 368 RDFLVKSFGELEG---VKMSEPQGAFYLFIDF 396 (429)
Q Consensus 368 r~~l~~~L~~l~g---~~~~~p~~~~~~~~~l 396 (429)
.+++.+.|+++.. +..+...|.|+ -+.+
T Consensus 355 g~~l~~~L~~l~~~~~v~~vrg~Gl~~-~ie~ 385 (460)
T PRK06541 355 EPAFRATLEKLLDLPIVGDVRGDGYFY-GIEL 385 (460)
T ss_pred HHHHHHHHHHhhcCCCeEEEEecceEE-EEEE
Confidence 8888888877522 22345666554 4444
No 291
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.66 E-value=6.1e-14 Score=140.59 Aligned_cols=277 Identities=16% Similarity=0.142 Sum_probs=197.9
Q ss_pred ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCC--------C-
Q 014172 109 TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSP--------G- 179 (429)
Q Consensus 109 ~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~--------g- 179 (429)
+++...+++...+.++.....-.++..++.+.+..++.+.++.+ ..-.=.+|.|+|+++.+++++..+. +
T Consensus 74 ~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~ 152 (460)
T COG0076 74 VPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRALAESG 152 (460)
T ss_pred CHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhccc
Confidence 46778888888887655444344578999999999999999864 3345689999999999887775211 1
Q ss_pred -----CEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcE--EEEcCCCCCccCCCCHHHHHH
Q 014172 180 -----DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRL--LILCSPSNPTGSVYPKNLLDE 252 (429)
Q Consensus 180 -----d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~--i~l~~p~NPtG~~~~~~~l~~ 252 (429)
-+|+++.-.|.+....++.+|.+...+++.+. ++.+|+++|++++++.+.. |+-+.++-+||.+=+ +++
T Consensus 153 ~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDd---i~~ 228 (460)
T COG0076 153 KPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDD---IEE 228 (460)
T ss_pred ccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHhhccCceEEEEecCCCCCccCC---HHH
Confidence 16999999999999999999999999999875 6789999999999887665 777888899999988 999
Q ss_pred HHHHHHhCCCeEEEEccCCccccc--CCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHH-HHHHHHHHhh
Q 014172 253 IARIVAKHPRLLVLSDEIYEHIIY--APATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-FVAACNKIQS 329 (429)
Q Consensus 253 I~~~a~~~~~i~vi~Deay~~~~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~-~~~~l~~~~~ 329 (429)
|.++|+++ ++|+++|.||+++.. ..........+ ....-+..+++|.+. .-..+||++..++ -.........
T Consensus 229 ia~ia~~~-~i~lHVDAA~GG~~~pf~~~~~~~~f~l---~~vdSIt~d~HK~g~-aP~~~G~il~rd~e~l~~~~~~~~ 303 (460)
T COG0076 229 LADIAEEY-GIWLHVDAAFGGFLLPFLEPDGRWDFGL---EGVDSITVDGHKYGL-APIGCGVVLFRDEEALRRILIFAD 303 (460)
T ss_pred HHHHHHHc-CCcEEEEccccceeecccCccchhhcCC---CCceEEEECcccccC-CCCCceEEEEECHHHhhhhhhccc
Confidence 99999999 999999999998653 22211111111 233346778999764 7788999998654 3333322211
Q ss_pred cccC---------CCchHH-H-HHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeec-CCceEEEEEecC
Q 014172 330 QFTS---------GASSIS-Q-KAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-PQGAFYLFIDFS 397 (429)
Q Consensus 330 ~~~~---------~~~~~~-q-~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~-p~~~~~~~~~l~ 397 (429)
++.. ..+..+ + .++...+.. .+.+.+.++.++..+..+++.+.|++++.+++.. |..+. +.++.+
T Consensus 304 ~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~--lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~-V~fr~~ 380 (460)
T COG0076 304 YYLPGGGIPNFTILGSRPGRQALALYANLRR--LGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPI-VAFRLK 380 (460)
T ss_pred ccCCCCCcCceeEeeccchHHHHHHHHHHHH--hCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccce-EEEEcC
Confidence 1111 112222 2 222222222 1467788888888899999999999996588775 54444 667775
Q ss_pred C
Q 014172 398 T 398 (429)
Q Consensus 398 ~ 398 (429)
+
T Consensus 381 ~ 381 (460)
T COG0076 381 D 381 (460)
T ss_pred C
Confidence 4
No 292
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.65 E-value=6.6e-14 Score=136.90 Aligned_cols=262 Identities=12% Similarity=0.141 Sum_probs=182.1
Q ss_pred ChHHHHHHHHHHHHc----CCCCCCCCCCCH---HHHHHHHHHHHhhcCCCCCCCcEEEecC-hHHHHHHHHHHhcCCCC
Q 014172 109 TPVLIAEAGINAIRE----GFTRYTPNAGTL---ELRSAICHKLKEENGLSYTPDQILVSNG-AKQSILQAVLAVCSPGD 180 (429)
Q Consensus 109 ~p~~v~~a~~~~~~~----~~~~Y~~~~G~~---~lr~~ia~~l~~~~g~~~~~~~i~~t~G-~~~al~~~l~~l~~~gd 180 (429)
.|..+++++.+.+.+ +...|......+ ++.+.+.+.+++.++.+ +..+|++++| +|++++.++..++.+||
T Consensus 3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgT~a~ea~~~nl~~~~~ 81 (349)
T TIGR01364 3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIP-DNYEVLFLQGGATGQFAAVPLNLLAEGK 81 (349)
T ss_pred CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCC-CCceEEEEcCCchHHHHHHHHhcCCCCC
Confidence 578899999988763 222333333334 66666777777777731 2357888877 99999999999999999
Q ss_pred EEEEcCCCCCCh--HHHHHHcCCEEEEecCCCC--CCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHH
Q 014172 181 EVIIPAPFWVSY--PEMARIADATPVILPTRIS--ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARI 256 (429)
Q Consensus 181 ~Vlv~~p~y~~~--~~~~~~~g~~~~~v~~~~~--~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~ 256 (429)
++++..-+..+. .+.++..|+ ++.+...+. .+..+++++++ +++++++|.+++-.+.||+..+ ++
T Consensus 82 ~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ETstGv~~~--------~l 150 (349)
T TIGR01364 82 VADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANETIHGVEFR--------EL 150 (349)
T ss_pred eEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCCcccEecc--------ee
Confidence 988776655543 467888999 777765422 22245667665 3568999999999999999876 56
Q ss_pred HHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHH---------
Q 014172 257 VAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI--------- 327 (429)
Q Consensus 257 a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~--------- 327 (429)
++.+ ++++++|.+.+. +..+..+.. ++ +++.|..|.+|.+| +|+++.++++++.+...
T Consensus 151 ~~~~-~~l~iVDavss~----g~~~id~~~----~d--~~~~ssqK~lgP~G--lg~l~~s~~~~~~~~~~~~~~~~~~~ 217 (349)
T TIGR01364 151 PDVK-NAPLVADMSSNI----LSRPIDVSK----FG--LIYAGAQKNIGPAG--LTVVIVRKDLLGRASRITPSMLNYKI 217 (349)
T ss_pred cccC-CCeEEEEccccc----cCccCCHHH----cc--EEEEecccccCCCc--eEEEEECHHHHhhcccCCCCcchHHH
Confidence 6678 899999999876 333333332 23 88999999998776 89999999887655221
Q ss_pred -h--hcccCCCchHHHHHHHHHHhcCCCChH-HHHHHHHHHHHHHHHHHHHhccCCCceeec--C--CceEEEEEecC
Q 014172 328 -Q--SQFTSGASSISQKAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSFGELEGVKMSE--P--QGAFYLFIDFS 397 (429)
Q Consensus 328 -~--~~~~~~~~~~~q~aa~~~l~~~~~~~~-~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~--p--~~~~~~~~~l~ 397 (429)
. .....+++.....++.++|+.- .++ .++++.+++++..+++++.|++++|+.... + ..+..+.+.++
T Consensus 218 ~~~~~~~~~Tp~~~~i~al~~al~~l--~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~ 293 (349)
T TIGR01364 218 HAENDSMYNTPPTFAIYVSGLVFKWL--KEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLG 293 (349)
T ss_pred HHhcCCCCCCCcHHHHHHHHHHHHHH--HHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecC
Confidence 1 1122356677777777777741 133 488999999999999999999997764432 1 23233455665
No 293
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.65 E-value=5.9e-14 Score=135.83 Aligned_cols=311 Identities=16% Similarity=0.208 Sum_probs=198.0
Q ss_pred cCCCeEEcCCCCCCCC--C-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGEPDFD--T-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~~~~~--~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..||+..+.-+.- - +|.|.+++.++++++. .|+.+ .++.-.+|+.+.+..+ ..+.|-+++++|+|..
T Consensus 51 DGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~-~fg~P---te~Ei~~Aell~~~~p---~~e~vrfvnSGTEAtm 123 (432)
T COG0001 51 DGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGL-SFGAP---TELEVELAELLIERVP---SIEKVRFVNSGTEATM 123 (432)
T ss_pred CCCEeeehhccCcccccCCCCHHHHHHHHHHHHhcC-CCCCC---CHHHHHHHHHHHHhcC---cccEEEEecchhHHHH
Confidence 5778999988885433 2 6889999999998874 45432 3566667777766544 4489999999999999
Q ss_pred HHHHHhcC--CCCEEEEcCCCCCChHHHHHH-cC--C-----------------EEEEecCCCCCCCCCCHHHHHhhccc
Q 014172 170 QAVLAVCS--PGDEVIIPAPFWVSYPEMARI-AD--A-----------------TPVILPTRISENFLLDPKVLESKLTE 227 (429)
Q Consensus 170 ~~l~~l~~--~gd~Vlv~~p~y~~~~~~~~~-~g--~-----------------~~~~v~~~~~~~~~~d~e~l~~~l~~ 227 (429)
.+++.-.. .-|.|+..+-+|.++.+.+.. +| . .++.+|. + |++.++++++.
T Consensus 124 sAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y---N----D~~al~~~~~~ 196 (432)
T COG0001 124 SAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY---N----DLEALEEAFEE 196 (432)
T ss_pred HHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecC---C----CHHHHHHHHHH
Confidence 88887532 338899999999988765543 22 1 1233332 1 89999998875
Q ss_pred ---CCcEEEE-cCCCCCccCCCC-HHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccCh
Q 014172 228 ---KSRLLIL-CSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSK 302 (429)
Q Consensus 228 ---~~~~i~l-~~p~NPtG~~~~-~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 302 (429)
+..+|++ +-..| .|.+.| ++.++.|.++|++| ++++|.||+...|...-........+..+ +.+|.|
T Consensus 197 ~g~~IAaVIvEPv~gn-~g~i~p~~~Fl~~Lr~lt~e~-G~lLI~DEViTGFR~~~gGaq~~~gi~PD------lttlGK 268 (432)
T COG0001 197 YGDDIAAVIVEPVAGN-MGVVPPEPGFLEGLRELTEEH-GALLIFDEVITGFRVALGGAQGYYGVEPD------LTTLGK 268 (432)
T ss_pred cCCcEEEEEeccccCC-CCCCCCCHHHHHHHHHHHHHc-CcEEEEecchhhcccCCcccccccCcCcc------hhhhhh
Confidence 4445555 33366 566555 45699999999999 99999999998876542233333333322 778999
Q ss_pred hcccccceeeEEEcCHHHHHHHHHH---hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC
Q 014172 303 AFAMTGWRLGYIAGPKHFVAACNKI---QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE 379 (429)
Q Consensus 303 ~~~~~G~R~G~v~~~~~~~~~l~~~---~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~ 379 (429)
..| .|+.+|.+.+..++++.+... -+..+++.++++..|..+.|+.-...+...+++.+.-.+.++-+.+.+.+.
T Consensus 269 iIG-GGlP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~- 346 (432)
T COG0001 269 IIG-GGLPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERH- 346 (432)
T ss_pred hhc-CCcceeeeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 999 999999999999999977643 334456678888888888887511101123333333334444444444444
Q ss_pred Cceee-cCCceEEEE-EecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 380 GVKMS-EPQGAFYLF-IDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 380 g~~~~-~p~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|+.+. ...+++|-+ +.-.+..............-..|...|+++ ||.+
T Consensus 347 g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~-GV~l 396 (432)
T COG0001 347 GIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNR-GVYL 396 (432)
T ss_pred CCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhC-Cccc
Confidence 65553 244555433 322111000000001111245677777776 8876
No 294
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.64 E-value=6.9e-14 Score=134.47 Aligned_cols=216 Identities=16% Similarity=0.129 Sum_probs=160.7
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHH----HcCCEEEEec
Q 014172 132 AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR----IADATPVILP 207 (429)
Q Consensus 132 ~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~v~ 207 (429)
+-...|.+.+++.. ....+++.+++..++..++..++..|+.|++....|.+....++ .+|++...++
T Consensus 77 Pt~~~le~~iaal~--------ga~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd 148 (409)
T KOG0053|consen 77 PTRDVLESGIAALE--------GAAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVD 148 (409)
T ss_pred CchHHHHHHHHHHh--------CCceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeec
Confidence 34456777777664 33468899999999999999999999999999999998765544 6788888887
Q ss_pred CCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccC
Q 014172 208 TRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL 287 (429)
Q Consensus 208 ~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~ 287 (429)
++ +++.+++++++++++||+.+|.||+..+.+ +++|.++|+++ |++|++|+.+....+- ....
T Consensus 149 ~~-------~~~~~~~~i~~~t~~V~~ESPsNPll~v~D---I~~l~~la~~~-g~~vvVDnTf~~p~~~-----~pL~- 211 (409)
T KOG0053|consen 149 VD-------DLKKILKAIKENTKAVFLESPSNPLLKVPD---IEKLARLAHKY-GFLVVVDNTFGSPYNQ-----DPLP- 211 (409)
T ss_pred hh-------hHHHHHHhhccCceEEEEECCCCCcccccc---HHHHHHHHhhC-CCEEEEeCCcCccccc-----Chhh-
Confidence 52 788999999999999999999999999999 99999999999 9999999998864221 1122
Q ss_pred CCCCCceEEEeccChhccccc-ceeeEEEcC-HHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 014172 288 PGMWERTLTVNGFSKAFAMTG-WRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFR 365 (429)
Q Consensus 288 ~~~~~~~i~~~S~SK~~~~~G-~R~G~v~~~-~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~ 365 (429)
.+-+|++.|.+|.++-.+ .=.|.++.+ +++.+.+.........+++++...-...-+.. +.-+.++..
T Consensus 212 ---lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglkt-------l~lRi~~~~ 281 (409)
T KOG0053|consen 212 ---LGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFLLSRGLKT-------LHLRINKHS 281 (409)
T ss_pred ---cCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHHHHHHHhcCcch-------hhhhHHHHH
Confidence 245599999999996333 334666675 88999998888878888888765544433332 223334444
Q ss_pred HHHHHHHHHhccCCCce
Q 014172 366 ERRDFLVKSFGELEGVK 382 (429)
Q Consensus 366 ~~r~~l~~~L~~l~g~~ 382 (429)
++...+...|++.|.++
T Consensus 282 ena~~~A~~Le~~~~v~ 298 (409)
T KOG0053|consen 282 ENALKIALLLEAHPKVK 298 (409)
T ss_pred HHHHHHHHHhhhCCcee
Confidence 45445555565554444
No 295
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.64 E-value=2.4e-14 Score=140.82 Aligned_cols=250 Identities=13% Similarity=0.154 Sum_probs=163.7
Q ss_pred CCCChHHHHHHHHHHHHcC----CCCCCCCCCCH---HHHHHHHHHHHhhcCCCCCCCcEEEecC-hHHHHHHHHHHhcC
Q 014172 106 DFDTPVLIAEAGINAIREG----FTRYTPNAGTL---ELRSAICHKLKEENGLSYTPDQILVSNG-AKQSILQAVLAVCS 177 (429)
Q Consensus 106 ~~~~p~~v~~a~~~~~~~~----~~~Y~~~~G~~---~lr~~ia~~l~~~~g~~~~~~~i~~t~G-~~~al~~~l~~l~~ 177 (429)
+...|+.|++++.+.+.+. ...|....... ++.+.+.+.+.+.+|.+ ++++|++|+| +|++++.++..++.
T Consensus 7 p~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~-~~~~vvf~~gs~T~a~~~~~~~l~~ 85 (355)
T cd00611 7 PAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIP-DNYKVLFLQGGATGQFAAVPLNLLG 85 (355)
T ss_pred CCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCceEEEEcCCchHHHHHHHHhcCC
Confidence 3446899999999887431 11122221112 33334444444445531 4578999988 99999999999987
Q ss_pred ---CCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCC-HHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHH
Q 014172 178 ---PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLD-PKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEI 253 (429)
Q Consensus 178 ---~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d-~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I 253 (429)
+||.|++ .+......+.++..|++++.++.+..+++ .+ ++..+..+++++++|.+++..|.||..++
T Consensus 86 ~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~------- 156 (355)
T cd00611 86 DKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKEEGKY-TKIPDVETWDLAPDAAYVHYCSNETIHGVEFD------- 156 (355)
T ss_pred CCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEecccccCC-CCCCCHhhcCCCCCCCEEEEeCCcccccEEcc-------
Confidence 4555544 22222234477888999999987533222 13 33333446778999999999999999754
Q ss_pred HHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHH------
Q 014172 254 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI------ 327 (429)
Q Consensus 254 ~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~------ 327 (429)
++++.| |+++++|.+.+. |..+..+..+ + +.+.|..|.+|.+| +|++++++++.+.+...
T Consensus 157 -~i~~~~-g~~~~VDa~qs~----g~~~idv~~~----~--~~~ss~~K~lGP~G--~g~l~~~~~~~~~~~~~~~~~~~ 222 (355)
T cd00611 157 -EVPDTG-GVPLVADMSSNI----LSRPIDVSKF----G--VIYAGAQKNLGPAG--VTVVIVRKDLLGKARKITPSMLN 222 (355)
T ss_pred -eecccC-CCeEEEEccccc----cCCCCCHHHh----C--EEEeecccccCCCc--eEEEEECHHHHhhcccCCCCccc
Confidence 344558 999999999886 3333333332 2 45666899998666 89999998887654321
Q ss_pred -----h-hcccCCCchHHHHHHHHHHhcCCCChH-HHHHHHHHHHHHHHHHHHHhccCCCc
Q 014172 328 -----Q-SQFTSGASSISQKAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSFGELEGV 381 (429)
Q Consensus 328 -----~-~~~~~~~~~~~q~aa~~~l~~~~~~~~-~~~~~~~~~~~~r~~l~~~L~~l~g~ 381 (429)
. .....+++.....++.++++.- .+. .++.+.+++++.++++++.|+++||+
T Consensus 223 ~~~~~~~~~~~~Tpn~~~i~~L~aal~~l--~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl 281 (355)
T cd00611 223 YKTHADNNSLYNTPPTFAIYMMGLVLKWL--KEQGGVEAMEKRNRQKAQLLYDTIDNSNGF 281 (355)
T ss_pred HHHHHhcCCCCCCChHHHHHHHHHHHHHH--HHcCCHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 0 1112345666667777777641 123 47888999999999999999999886
No 296
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.62 E-value=2.3e-13 Score=137.43 Aligned_cols=306 Identities=15% Similarity=0.166 Sum_probs=187.5
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..+|+..|. ..++- +|++.+++.+.+.+..+ + ......+.+..+++.+.+.... ..+.+++++++++++.
T Consensus 80 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~-~-~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~SGsEAve 155 (459)
T PRK11522 80 QGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPL-H-SQELLDPLRAMLAKTLAALTPG--KLKYSFFCNSGTESVE 155 (459)
T ss_pred CCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcc-c-ccccCCHHHHHHHHHHHHhCCC--CCCEEEEeCCchHHHH
Confidence 577899998884 44554 78999999998875321 1 1112245666677776654331 2368999999999999
Q ss_pred HHHHHhcC----CC-CEEEEcCCCCCChHHHHHHc-CCEEEE---ecCCCCC---CCCCCHHHHHhhcc------cCCcE
Q 014172 170 QAVLAVCS----PG-DEVIIPAPFWVSYPEMARIA-DATPVI---LPTRISE---NFLLDPKVLESKLT------EKSRL 231 (429)
Q Consensus 170 ~~l~~l~~----~g-d~Vlv~~p~y~~~~~~~~~~-g~~~~~---v~~~~~~---~~~~d~e~l~~~l~------~~~~~ 231 (429)
.+++.... +| ..|+...-+|.+....+... |-.... .|..+.- .+ .|.+.+++.+. +++.+
T Consensus 156 ~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~~~~~~~~iAa 234 (459)
T PRK11522 156 AALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPF-GNIEAMRTALSECKKTGDDVAA 234 (459)
T ss_pred HHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCC-CCHHHHHHHHHHhhccCCcEEE
Confidence 99886531 23 46888888888765443332 211111 1111100 01 26778887774 23445
Q ss_pred EEEcCCCCCccCCC-CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccccc-c
Q 014172 232 LILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-W 309 (429)
Q Consensus 232 i~l~~p~NPtG~~~-~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~ 309 (429)
|++...+...|... |.+.++++.++|++| |+++|.||++.+|-..|.. .....+.-..| +-+|+|.+| .| .
T Consensus 235 vIvEpv~g~~G~~~pp~~yl~~lr~lc~~~-g~llI~DEV~tG~GRtG~~-~a~e~~gv~PD----ivt~gK~lg-gG~~ 307 (459)
T PRK11522 235 VILEPIQGEGGVILPPEGYLTAVRKLCDEF-GALLILDEVQTGMGRTGKM-FACEHENVQPD----ILCLAKALG-GGVM 307 (459)
T ss_pred EEEecccCCCCCccCCHHHHHHHHHHHHHc-CCEEEeccceecCCccchh-hhhhccCCCCC----EEEechhhh-CCCc
Confidence 66655566677754 666899999999999 9999999999875333321 11111211122 347899998 77 6
Q ss_pred eeeEEEcCHHHHHHHHH--HhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC----CC-ce
Q 014172 310 RLGYIAGPKHFVAACNK--IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL----EG-VK 382 (429)
Q Consensus 310 R~G~v~~~~~~~~~l~~--~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l----~g-~~ 382 (429)
.+|.+++.+++.+.+.. .....+++.++++.+++.+.|+. .++ +++.+..+++-+++.+.|+++ |. +.
T Consensus 308 Pigav~~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~---i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~ 382 (459)
T PRK11522 308 PIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINV---LLE--QNLPAQAEQKGDYLLDGFRQLAREYPDLVQ 382 (459)
T ss_pred cceeEEEcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHH---Hhc--chHHHHHHHHHHHHHHHHHHHHHhCCCcee
Confidence 89999999998887642 12234455688888888888875 121 134445555555666665543 32 22
Q ss_pred eecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 383 MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 383 ~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
-++..| .++-+.+... .....+++.|+++ ||.+
T Consensus 383 ~VrG~G-l~~giel~~~-----------~~~~~i~~~l~~~-Gvl~ 415 (459)
T PRK11522 383 EARGKG-MLMAIEFVDN-----------EIGYNFASEMFRQ-RVLV 415 (459)
T ss_pred eEEece-eEEEEEecCc-----------hHHHHHHHHHHHC-CeEE
Confidence 233444 4466666431 1256788888875 8875
No 297
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.62 E-value=2.1e-13 Score=137.95 Aligned_cols=258 Identities=12% Similarity=0.152 Sum_probs=166.8
Q ss_pred cCCCeEEcCCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~~~--~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..||+..|... ++- +|++.+++.+.+.+.. .++. ..++...+|+.+.+... ..+.+.++++++++..
T Consensus 97 dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~-~~~~---~~~~~~~lAe~l~~~~p---~~~~v~f~~SGsEA~e 169 (474)
T PLN02482 97 DGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGT-SFGA---PCLLENVLAEMVIDAVP---SVEMVRFVNSGTEACM 169 (474)
T ss_pred CCCEEEEecccccccccCCCCHHHHHHHHHHHhhCC-CCCC---CCHHHHHHHHHHHHhCC---CCCEEEEeCChHHHHH
Confidence 47788998877633 343 7899999999987653 2322 23566667777766543 2479999999999999
Q ss_pred HHHHHhcC-CC-CEEEEcCCCCCChHHHHH-Hc--CC-----------------EEEEecCCCCCCCCCCHHHHHhhccc
Q 014172 170 QAVLAVCS-PG-DEVIIPAPFWVSYPEMAR-IA--DA-----------------TPVILPTRISENFLLDPKVLESKLTE 227 (429)
Q Consensus 170 ~~l~~l~~-~g-d~Vlv~~p~y~~~~~~~~-~~--g~-----------------~~~~v~~~~~~~~~~d~e~l~~~l~~ 227 (429)
.+++.... .| ++|+...-+|.+....+. .. |. .++.+| ++ |++.+++.+..
T Consensus 170 ~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~n-d~~~l~~~l~~ 242 (474)
T PLN02482 170 GVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAP------YN-DLEAVKKLFEA 242 (474)
T ss_pred HHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEec------CC-ChHHHHHHHHh
Confidence 99887532 23 678888888888543211 10 10 011111 11 78888888752
Q ss_pred ---CCcEEEEcCCCCCccCCCC-HHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChh
Q 014172 228 ---KSRLLILCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKA 303 (429)
Q Consensus 228 ---~~~~i~l~~p~NPtG~~~~-~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 303 (429)
+..+|++.......|.+.+ ++.+++|.++|++| |+++|.||++.++ ..+.. .....+.-..| +.+|+|.
T Consensus 243 ~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~-g~lLI~DEV~tGf-R~g~~-ga~~~~gv~PD----i~t~gK~ 315 (474)
T PLN02482 243 NKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKEN-GALLVFDEVMTGF-RIAYG-GAQEYFGITPD----LTTLGKV 315 (474)
T ss_pred CCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCe-ecCcc-hHhHHhCCCCC----EEEecch
Confidence 4556666555666787665 67899999999999 9999999999876 33321 11111111112 4578999
Q ss_pred cccccceeeEEEcCHHHHHHHHHH---hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 014172 304 FAMTGWRLGYIAGPKHFVAACNKI---QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 377 (429)
Q Consensus 304 ~~~~G~R~G~v~~~~~~~~~l~~~---~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 377 (429)
+| .|+.+|.+++++++++.+... ....+++.++++..++.+.|+. .++ .+..+...++-+++.+.|++
T Consensus 316 lg-gG~Pigav~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~---l~~--~~~~~~~~~~g~~l~~~L~~ 386 (474)
T PLN02482 316 IG-GGLPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR---LQQ--PGTYEYLDKITKKLIQGILE 386 (474)
T ss_pred hh-CCCceEEEEEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHH---Hhc--cCHHHHHHHHHHHHHHHHHH
Confidence 99 899999999999999887532 1223445678888888887775 111 12344444455555555544
No 298
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.62 E-value=7.5e-15 Score=136.80 Aligned_cols=291 Identities=20% Similarity=0.282 Sum_probs=164.1
Q ss_pred EEcCCCCCCCCChHHHHHHHHHHH-HcCCC--CCCC--C---CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 98 IRLAAGEPDFDTPVLIAEAGINAI-REGFT--RYTP--N---AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 98 i~L~~g~~~~~~p~~v~~a~~~~~-~~~~~--~Y~~--~---~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
+|+..|+|.+--|-....+...++ -.+++ .|.. . .-.++|.+.|.++.+...+...+...|++++|+|+.++
T Consensus 1 ~d~d~GDP~~~E~yW~~~~~~~avvi~gw~rMSY~~~~~~~~f~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~ 80 (363)
T PF04864_consen 1 ADADSGDPTFFEPYWRRHGDSSAVVIPGWHRMSYFSDSSNGWFISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFN 80 (363)
T ss_dssp EEESS---GGGHHHHCCTHHHH-EEE-TTTT-SSSS-TTSSTTS-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHH
T ss_pred CCcCCCCchhhHHHHHhcCcceeEEEeccccceeEEecCCceeccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHH
Confidence 567788876533333222222221 12332 2332 1 22478999999888776666566679999999999999
Q ss_pred HHHHHhcCC----C--CEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEE-EEcCCCCCcc
Q 014172 170 QAVLAVCSP----G--DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLL-ILCSPSNPTG 242 (429)
Q Consensus 170 ~~l~~l~~~----g--d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i-~l~~p~NPtG 242 (429)
+++.+|... + -.|+...|.|+.|........-......-+. ..|. +- +.....| ++++||||.|
T Consensus 81 AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~Gda-~~~~-~~-------~~~~~~IElVTSPNNPDG 151 (363)
T PF04864_consen 81 AALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWAGDA-SNFK-NS-------DNPSPYIELVTSPNNPDG 151 (363)
T ss_dssp HHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEEEEC-CCGT-T--------S-CCGEEEEEESS-TTT-
T ss_pred HHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCccccccH-Hhhc-cC-------CCCCCeEEEEeCCCCCcc
Confidence 999998533 1 3799999999999988765433221221111 1121 00 1123344 7899999999
Q ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcC-HHHH
Q 014172 243 SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFV 321 (429)
Q Consensus 243 ~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~-~~~~ 321 (429)
.. .+.++ +.- +..+|.|-+|..=.|.+ + ....+..|.+.|+||.-|-+|.|+||++.. +++.
T Consensus 152 ~l-----r~~V~---~g~-~~k~I~D~AYYWPhyTp-----I---~~~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va 214 (363)
T PF04864_consen 152 QL-----REAVL---NGS-SGKVIHDLAYYWPHYTP-----I---TAPADHDIMLFTLSKLTGHAGSRFGWALVKDEEVA 214 (363)
T ss_dssp ----------SS---TTT-EEEEEEE-TT-STTTS-----------S-B--SEEEEEHHHHCS-GGG-EEEEEES-HHHH
T ss_pred cc-----cchhc---CCC-Ccceeeeeeeecccccc-----c---CCCCCCceEEEEEecccCccccccceeeecCHHHH
Confidence 87 33343 333 77889999998733332 1 112466699999999999999999998875 5678
Q ss_pred HHHHHHhhcccCCCchHHHHHHHHHHhc---CCCC----hHHHHHHHHHHHHHHHHHHHHhccCCCceee--c-------
Q 014172 322 AACNKIQSQFTSGASSISQKAGVAALGL---GYAG----GEVVSKMVKAFRERRDFLVKSFGELEGVKMS--E------- 385 (429)
Q Consensus 322 ~~l~~~~~~~~~~~~~~~q~aa~~~l~~---~~~~----~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~--~------- 385 (429)
+.+.+.....+.+++.=+|.=++..|+. +... .+.+.--++.+++|...|.+.++.-.-+.+. .
T Consensus 215 ~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff 294 (363)
T PF04864_consen 215 KKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFF 294 (363)
T ss_dssp HHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTT
T ss_pred HHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhcccc
Confidence 8888887778888999999877777752 1100 1345556777888888888888764223222 1
Q ss_pred ----CCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCee
Q 014172 386 ----PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVL 427 (429)
Q Consensus 386 ----p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~ 427 (429)
..+.-|.|+++... +.+=|..+|+++||.
T Consensus 295 ~~~~~psPafAWlkCe~e-------------ed~DC~~~l~~~~I~ 327 (363)
T PF04864_consen 295 KRVREPSPAFAWLKCERE-------------EDEDCYAVLREAKII 327 (363)
T ss_dssp TCEEE---SEEEEEESSC-------------GGSSHHHHHHCTTEE
T ss_pred ccccCCCCCeEEEecCCc-------------ccccHHHHHHhCCcc
Confidence 12344699999752 223344555666764
No 299
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.62 E-value=2.3e-13 Score=134.10 Aligned_cols=315 Identities=14% Similarity=0.146 Sum_probs=195.8
Q ss_pred cCCCeEEcCCCCCC--CCC-hHHHHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 93 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGF-TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 93 ~g~~~i~L~~g~~~--~~~-p~~v~~a~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
.|+..|||..|... ++- +|.|++++.+.+.... +.+.. ...+-...+++.|.+....+ ..+.+++++++++++
T Consensus 54 dG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~--~~~e~~v~~ae~L~~~~p~~-~~~~~~f~~sGaeA~ 130 (447)
T COG0160 54 DGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRD--LYYEPYVELAEKLTALAPGS-GLKKVFFGNSGAEAV 130 (447)
T ss_pred CCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCc--ccchhHHHHHHHHHHhCCcc-cCCeEEecCCcHHHH
Confidence 68889999997644 333 7999999999876532 22211 12255666666666543321 346899999999999
Q ss_pred HHHHHHhc--CCCCEEEEcCCCCCChHHH-HHHcCC-------------EEEEecCCCC--CCCCC--------CHHHHH
Q 014172 169 LQAVLAVC--SPGDEVIIPAPFWVSYPEM-ARIADA-------------TPVILPTRIS--ENFLL--------DPKVLE 222 (429)
Q Consensus 169 ~~~l~~l~--~~gd~Vlv~~p~y~~~~~~-~~~~g~-------------~~~~v~~~~~--~~~~~--------d~e~l~ 222 (429)
+++++... .....||...-+|++-... +.+.|- .+..+|.... ..+.. ..+.++
T Consensus 131 E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e 210 (447)
T COG0160 131 EAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIE 210 (447)
T ss_pred HHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHH
Confidence 99988753 2346788888877764432 222221 2455554321 11111 234455
Q ss_pred hhccc------CCcEEEEcCCCCCccCCC-CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceE
Q 014172 223 SKLTE------KSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 295 (429)
Q Consensus 223 ~~l~~------~~~~i~l~~p~NPtG~~~-~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i 295 (429)
+.+.. ++.++++...+.-.|.+. |++.++++.++|++| |+++|.||++.++...| ..+.+....- .-
T Consensus 211 ~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~-gillI~DEVQtG~GRTG-~~fa~E~~gv----~P 284 (447)
T COG0160 211 RALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREH-GILLIADEVQTGFGRTG-KMFAFEHFGV----EP 284 (447)
T ss_pred HHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCccc-cchhhhhcCC----CC
Confidence 54421 456777777788788554 555799999999999 99999999999986666 2333333221 22
Q ss_pred EEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHh
Q 014172 296 TVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSF 375 (429)
Q Consensus 296 ~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L 375 (429)
-+-+++|.+| .|+.+|.+++.+++.+ ...-....+++.++.+.+++.+.|+. .++ +++.++-++.=+++.++|
T Consensus 285 Divt~aK~ig-~G~Pl~avv~r~ei~~-~~~g~~~~Tf~GNpva~Aaa~AvL~v---ie~--e~L~~~a~~~G~~l~~~L 357 (447)
T COG0160 285 DIVTLAKSLG-GGLPLSAVVGRAEIMD-WPPGGHGGTFGGNPVACAAALAVLDV---IEE--ENLLERAAELGEYLRDRL 357 (447)
T ss_pred CEEEeccccc-CCCceeEEeccHHhcc-cCCcccCCCCCcCHHHHHHHHHHHHH---HHH--ccHHHHHHHHHHHHHHHH
Confidence 2566999999 6999999999999988 44444455678899999999999984 122 144455555555555555
Q ss_pred ccC----CCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 376 GEL----EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 376 ~~l----~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.++ |-+-=++..| +++-+++-.-.... .....-...++.+++++ |+.+
T Consensus 358 ~~l~~~~~~IgdVRG~G-lm~giE~v~d~~t~---~p~~~~~~~i~~~~~~~-Glil 409 (447)
T COG0160 358 EELQEKHPLIGDVRGLG-LMIGVELVKDRDTK---EPDAELAAKIVARAFER-GLLL 409 (447)
T ss_pred HHHHhhcCceecccccc-eEEEEEEecCCCCC---CCCHHHHHHHHHHHHHc-CCEE
Confidence 543 3222233444 44666664210000 00001356788888777 7654
No 300
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.62 E-value=7.4e-14 Score=145.00 Aligned_cols=156 Identities=21% Similarity=0.205 Sum_probs=116.4
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH-HHHcCCEEEEecCCCCCCC----CCCHH-----HHHh
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM-ARIADATPVILPTRISENF----LLDPK-----VLES 223 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~-~~~~g~~~~~v~~~~~~~~----~~d~e-----~l~~ 223 (429)
.....++++|+|.++..++++++.+||.||++..+|-+.... +.+.|++++++.... +.+ .++++ .|++
T Consensus 189 Ad~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~-n~~Gi~g~I~~~~~~~~~i~~ 267 (720)
T PRK13578 189 ADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETAR-NPFGFIGGIDAHCFDEEYLRE 267 (720)
T ss_pred CCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccc-cccCCcCCCChHHccHHHHHH
Confidence 456789999999999999999999999999999999998885 899999999997543 222 24544 4887
Q ss_pred hcccC----------CcEEEEcCCCCCccCCCCHHHHHHHHHH-HHhCCCeEEEEccCCcc-cccCCC---CCCccccCC
Q 014172 224 KLTEK----------SRLLILCSPSNPTGSVYPKNLLDEIARI-VAKHPRLLVLSDEIYEH-IIYAPA---THTSFASLP 288 (429)
Q Consensus 224 ~l~~~----------~~~i~l~~p~NPtG~~~~~~~l~~I~~~-a~~~~~i~vi~Deay~~-~~~~~~---~~~~~~~~~ 288 (429)
++... .++++|++|+. -|.+++ +++|+++ ++.+ + .|++||||+. +.|.+. .+.+.....
T Consensus 268 ~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~~~~h~~-~-~llvDEAhgah~~F~p~~~~~p~~al~~G 341 (720)
T PRK13578 268 QIREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVDKIGHLC-D-YILFDSAWVGYEQFIPMMADCSPLLLELN 341 (720)
T ss_pred HHHhcCccccccccCceEEEEECCCC-cceeec---HHHHHHHhhccC-C-cEEEeCcchhhhccCcccccCChhhhhcC
Confidence 77532 58899999987 899999 8889998 6777 7 8899999984 445442 122222333
Q ss_pred CCCCceEEEeccChhcccccceee-EEEcCH
Q 014172 289 GMWERTLTVNGFSKAFAMTGWRLG-YIAGPK 318 (429)
Q Consensus 289 ~~~~~~i~~~S~SK~~~~~G~R~G-~v~~~~ 318 (429)
.+...++++.|.+|.++ ++.-+ ++....
T Consensus 342 aD~p~i~v~QStHKtL~--alTQaS~LHvk~ 370 (720)
T PRK13578 342 ENDPGIFVTQSVHKQQA--GFSQTSQIHKKD 370 (720)
T ss_pred CCCCCeEEEEChhhcch--hhhhHhhhhcCC
Confidence 32345699999999984 44443 444433
No 301
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.61 E-value=2.4e-13 Score=133.61 Aligned_cols=284 Identities=10% Similarity=0.070 Sum_probs=186.2
Q ss_pred CCChHHHHHHHHHHHHc----CCCCCCCCCCCH---HHHHHHHHHHHhhcCCCCCCCcEEEe-cChHHHHHHHHHHhcCC
Q 014172 107 FDTPVLIAEAGINAIRE----GFTRYTPNAGTL---ELRSAICHKLKEENGLSYTPDQILVS-NGAKQSILQAVLAVCSP 178 (429)
Q Consensus 107 ~~~p~~v~~a~~~~~~~----~~~~Y~~~~G~~---~lr~~ia~~l~~~~g~~~~~~~i~~t-~G~~~al~~~l~~l~~~ 178 (429)
...|+.|++++...+.+ +...+......+ ++.+.+.+.+++.++.+ +..+|+++ ++++.+++.++..++.+
T Consensus 12 ~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgt~~~Ea~~~nl~~~ 90 (360)
T PRK05355 12 AMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIP-DNYKVLFLQGGASLQFAMVPMNLLGG 90 (360)
T ss_pred CCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEcCCchHHHHHHHHhcCCC
Confidence 34689999999987632 122222222223 66677777777777742 23456555 66889999999999999
Q ss_pred CCEEEEcCCCCCCh--HHHHHHcCCEEEEecCCCCCCCCCCHHHHHh-hcccCCcEEEEcCCCCCccCCCCHHHHHHHHH
Q 014172 179 GDEVIIPAPFWVSY--PEMARIADATPVILPTRISENFLLDPKVLES-KLTEKSRLLILCSPSNPTGSVYPKNLLDEIAR 255 (429)
Q Consensus 179 gd~Vlv~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~-~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~ 255 (429)
||++++..-+..+. .+.++..|.. +.+...+..+. .+..++++ .+++++++|.+++-.+.||+..+ .+++|
T Consensus 91 g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~-~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~--~i~~i-- 164 (360)
T PRK05355 91 GKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGF-TYIPPLDEWQLSDDAAYVHYTSNETIDGTEFH--ELPDT-- 164 (360)
T ss_pred CCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCC-CCCCChhhccCCCCCCEEEEccCCCcceEecC--ccccc--
Confidence 99888776655443 4678888865 56655432333 34444444 77778999999999999999984 15555
Q ss_pred HHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHH--------
Q 014172 256 IVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI-------- 327 (429)
Q Consensus 256 ~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~-------- 327 (429)
| ++++|+|.+.+. +..+..+.. ++ +++.|..|.+|.+| +|++++++++++.+...
T Consensus 165 ----~-g~l~vVDavss~----g~~~idv~~----~d--~~~~ssqK~lgP~G--lg~l~~s~~~l~~~~~~~~~~~~~~ 227 (360)
T PRK05355 165 ----G-DVPLVADMSSDI----LSRPIDVSK----FG--LIYAGAQKNIGPAG--LTIVIVREDLLGRALPSIPSMLDYK 227 (360)
T ss_pred ----C-CCcEEEEcCccc----cCccCCHHH----cc--EEEEeccccccCCc--eEEEEECHHHHhhcccCCChHHHHH
Confidence 7 899999999876 333333332 23 88999999998666 89999998887665431
Q ss_pred ---h-hcccCCCchHHHHHHHHHHhcCCCChH-HHHHHHHHHHHHHHHHHHHhccCCCceeecC---CceEEEEEecCCc
Q 014172 328 ---Q-SQFTSGASSISQKAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSFGELEGVKMSEP---QGAFYLFIDFSTY 399 (429)
Q Consensus 328 ---~-~~~~~~~~~~~q~aa~~~l~~~~~~~~-~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p---~~~~~~~~~l~~~ 399 (429)
. .....+++.....++.++|+.- .++ .++++.+++++..+++++.|++++.+....+ ..+.-+.+.+++.
T Consensus 228 ~~~~~~~~~~Tp~~~~i~aL~~aL~~i--~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~ 305 (360)
T PRK05355 228 THADNDSMYNTPPTFAIYLAGLVFKWL--KEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADE 305 (360)
T ss_pred HHHhcCCccCCCcHHHHHHHHHHHHHH--HHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCCh
Confidence 1 1123456777777777777741 133 4888999999999999999999843222111 2323355666642
Q ss_pred cCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 400 YGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+..++...+.++ |+.+
T Consensus 306 -----------~~~~~~~~~~~~~-Gi~~ 322 (360)
T PRK05355 306 -----------ELDKKFLAEAKAA-GLVG 322 (360)
T ss_pred -----------HHHHHHHHHHHHC-CCcc
Confidence 1234555665544 6643
No 302
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.60 E-value=1.9e-13 Score=135.53 Aligned_cols=279 Identities=11% Similarity=0.031 Sum_probs=175.4
Q ss_pred CChHH-HHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEec-ChHHHHHHHHHHhcCC-CCEEEE
Q 014172 108 DTPVL-IAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSN-GAKQSILQAVLAVCSP-GDEVII 184 (429)
Q Consensus 108 ~~p~~-v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~-G~~~al~~~l~~l~~~-gd~Vlv 184 (429)
.+|+. +++++........ ..++ -..++.+.+.+.+.+.+|.+ ++++|++++ |+|.+++.++..++++ ++.|++
T Consensus 22 ~~~~~~v~~a~~~~~~~~~-hr~~--~f~~~~~~~r~~l~~l~~~~-~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~ 97 (378)
T PRK03080 22 KKRPGWQLEALADALLGRS-HRQK--PVKALLKRVIEGTRELLSLP-EGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA 97 (378)
T ss_pred CCChHHHHHHHHhhhcccC-cCCH--HHHHHHHHHHHHHHHHhCCC-CCceEEEECCchHHHHHHHHHhcCCCCcceEEE
Confidence 34566 8888886543211 2222 22444445555555555632 345788886 8999999999999875 455555
Q ss_pred cCCCCCCh-HH-HHHHcCC-EEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCC
Q 014172 185 PAPFWVSY-PE-MARIADA-TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP 261 (429)
Q Consensus 185 ~~p~y~~~-~~-~~~~~g~-~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~ 261 (429)
.-.|..- .. ..+..|+ +++.++.+ .+..+|+++++. ++.|.+++..|.||..+| +++|++ ++|
T Consensus 98 -~g~f~~~~~~~~~~~~g~~~v~~~~~~--~g~~~d~~~i~~-----~~~V~~~h~~t~tG~~~p---i~~I~~--~~~- 163 (378)
T PRK03080 98 -WESFGSKWATDVVKQLKLEDPRVLEAD--YGSLPDLSAVDF-----DRDVVFTWNGTTTGVRVP---VARWIG--ADR- 163 (378)
T ss_pred -eCHHHHHHHHHHHhhcCCCCceEeccC--CCCCCCHhhcCC-----CCCEEEEecCCccceecc---chhhcc--ccC-
Confidence 3344432 22 2356798 88888864 334578777442 567889999999999999 778888 788
Q ss_pred CeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHh-------------
Q 014172 262 RLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ------------- 328 (429)
Q Consensus 262 ~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~------------- 328 (429)
|+++|+|.+++. |..+..+.. -.+++.|..|+++. ...+|+++.+++.++.+....
T Consensus 164 g~~~vVDa~qs~----G~~pidv~~------iD~~~~s~~K~l~~-P~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~ 232 (378)
T PRK03080 164 EGLTICDATSAA----FALPLDWSK------LDVYTFSWQKVLGG-EGGHGMAILSPRAVERLESYTPARPIPKFFRLTK 232 (378)
T ss_pred CCeEEEeccccc----ccCCCCHHH------CcEEEEehhhhCCC-CCceEEEEECHHHHHhhhcccCCCCCchhheecc
Confidence 999999999886 333333332 24889999999862 234899999998887654311
Q ss_pred ---------hccc-CCCchHHHHHHHHHHhcCCCChH--HHHHHHHHHHHHHHHHHHHhccCCCceeec--C--CceEEE
Q 014172 329 ---------SQFT-SGASSISQKAGVAALGLGYAGGE--VVSKMVKAFRERRDFLVKSFGELEGVKMSE--P--QGAFYL 392 (429)
Q Consensus 329 ---------~~~~-~~~~~~~q~aa~~~l~~~~~~~~--~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~--p--~~~~~~ 392 (429)
...+ ..++.....++.++|+. ..+ .++++.++.+++.+++++.|++++++++.. + .++..+
T Consensus 233 ~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~---l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~ 309 (378)
T PRK03080 233 GGKAIENSFKGQTINTPSMLTVEDYLDQLDW---ANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSV 309 (378)
T ss_pred chHHhhhhhcCCcccCchHHHHHHHHHHHHH---HHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEE
Confidence 0001 12333344444555553 222 467788888999999999999886666542 2 232335
Q ss_pred EEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 393 FIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 393 ~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+++++. . . ....++..+|+++ |+.+
T Consensus 310 ~~~~~~~-~---~-----~~~~~~~~~l~~~-~i~v 335 (378)
T PRK03080 310 TLDFVDA-Q---A-----AVDAAAVAKLLRE-NGAV 335 (378)
T ss_pred EEEcCCc-h---H-----HHHHHHHHHHHHc-CCee
Confidence 5566540 0 0 0234577778776 5543
No 303
>PRK15029 arginine decarboxylase; Provisional
Probab=99.60 E-value=1.9e-13 Score=143.33 Aligned_cols=165 Identities=15% Similarity=0.120 Sum_probs=123.1
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCC-C
Q 014172 135 LELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISE-N 213 (429)
Q Consensus 135 ~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~ 213 (429)
.+..+..|+. || .....++++|+|.++..++++++++||.|+++..+|-+....+.+.|+++++++..... +
T Consensus 208 ~eAq~~aA~~----fg---A~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~G 280 (755)
T PRK15029 208 GESEKYAARV----FG---ADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYG 280 (755)
T ss_pred HHHHHHHHHH----hC---CCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccC
Confidence 3444444444 45 45688999999999999999999999999999999999999999999999999744311 1
Q ss_pred --CCCC-----HHHHHhhccc--CCc--------EEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCc-ccc
Q 014172 214 --FLLD-----PKVLESKLTE--KSR--------LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE-HII 275 (429)
Q Consensus 214 --~~~d-----~e~l~~~l~~--~~~--------~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~-~~~ 275 (429)
..++ ++.+++++.. ..+ +++|++|+. -|.+++ +++|+++|+++ ++.|++||||+ ++.
T Consensus 281 i~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~d---i~~I~~~~h~~-~~~llvDEAhGah~~ 355 (755)
T PRK15029 281 IIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYN---AKEAQDLLEKT-SDRLHFDEAWYGYAR 355 (755)
T ss_pred CccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeC---HHHHHHHHHhc-CCeEEEECccccccc
Confidence 1234 8999988853 334 899999987 799999 99999999999 99999999997 455
Q ss_pred cCCCCCC-ccccC-C-CCCCc-eEEEeccChhcccccceeeE
Q 014172 276 YAPATHT-SFASL-P-GMWER-TLTVNGFSKAFAMTGWRLGY 313 (429)
Q Consensus 276 ~~~~~~~-~~~~~-~-~~~~~-~i~~~S~SK~~~~~G~R~G~ 313 (429)
|.+.-+. +.... . ...+- ++++.|.+|.+ +++..|.
T Consensus 356 F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS 395 (755)
T PRK15029 356 FNPIYADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQAS 395 (755)
T ss_pred cCccccccccccccccccCCCceEEEEchhhcc--cchhhhh
Confidence 5542221 11100 0 10233 49999999998 4555554
No 304
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.59 E-value=2.2e-13 Score=127.55 Aligned_cols=219 Identities=15% Similarity=0.174 Sum_probs=159.4
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChH----HHHHHcCCEEEEe
Q 014172 131 NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVIL 206 (429)
Q Consensus 131 ~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v 206 (429)
++....|.+.|+..- .|+ .-+.+.++..++..++..++++||.|+...--|.+.. ..++..|.++.++
T Consensus 61 NPT~~vlE~RiAaLE---GG~-----aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fv 132 (426)
T COG2873 61 NPTTDVLEERIAALE---GGV-----AALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFV 132 (426)
T ss_pred CchHHHHHHHHHHhh---cch-----hhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEe
Confidence 345677888888763 232 2467778888999999999999999999998888654 3457789999999
Q ss_pred cCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCcccc
Q 014172 207 PTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS 286 (429)
Q Consensus 207 ~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~ 286 (429)
+. .|++.++++++++||+|++.+-.||.+.+.+ +++|+++|++| ++.+|+|....-- .-+..
T Consensus 133 d~-------~d~~~~~~aI~~nTkavf~EtigNP~~~v~D---ie~ia~iAh~~-gvpliVDNT~atp-------yl~rP 194 (426)
T COG2873 133 DP-------DDPENFEAAIDENTKAVFAETIGNPGLDVLD---IEAIAEIAHRH-GVPLIVDNTFATP-------YLCRP 194 (426)
T ss_pred CC-------CCHHHHHHHhCcccceEEEEeccCCCccccC---HHHHHHHHHHc-CCcEEEecCCCcc-------eecch
Confidence 74 3899999999999999999999999999999 99999999999 9999999987641 11122
Q ss_pred CCCCCCceEEEeccChhcccccceeeEEEcCH---HHH---------------------H---------HH-HHHhhccc
Q 014172 287 LPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK---HFV---------------------A---------AC-NKIQSQFT 332 (429)
Q Consensus 287 ~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~---~~~---------------------~---------~l-~~~~~~~~ 332 (429)
+ ..+-.|++.|.+|.+|-.|--+|-++.+. ++. + +. ....+-.+
T Consensus 195 ~--~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlG 272 (426)
T COG2873 195 I--EHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLG 272 (426)
T ss_pred h--hcCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhcc
Confidence 2 24667999999999988888888776531 111 1 00 11122233
Q ss_pred CCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceee
Q 014172 333 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (429)
Q Consensus 333 ~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~ 384 (429)
.+.+++.....+. +-+-+.-+.++..++...+.+-|++.|.+.|+
T Consensus 273 a~lsPfnAfl~lq-------GlETL~LRmerH~~NA~~vA~~L~~HpkV~~V 317 (426)
T COG2873 273 ATLSPFNAFLLLQ-------GLETLSLRMERHCENALKVAEFLENHPKVAWV 317 (426)
T ss_pred cccCcHHHHHHHh-------chhhhHHHHHHHHHhHHHHHHHHhcCCCeeee
Confidence 3344443322222 12345566777788888899999988777664
No 305
>PRK07482 hypothetical protein; Provisional
Probab=99.59 E-value=9.1e-13 Score=133.53 Aligned_cols=318 Identities=12% Similarity=0.063 Sum_probs=185.8
Q ss_pred cCCCeEEcCCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCC-CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 93 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPN-AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 93 ~g~~~i~L~~g~~~--~~~-p~~v~~a~~~~~~~~~~~Y~~~-~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
.|+.+||+..|... ++- +|++.+++.+++++.. .+... ....+.+..+|+.+.+.... +.+.+++++++++++
T Consensus 48 dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~-~~~~~~~~~~~~~~~lAe~L~~~~p~--~~~~v~f~~sGSEAv 124 (461)
T PRK07482 48 QGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELA-YYHTYVGHGTEASITLSKRIIDRAPA--GMSKVYYGLSGSDAN 124 (461)
T ss_pred CCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcC-ccccccccCCHHHHHHHHHHHHhCCC--CcCEEEEeCchHHHH
Confidence 57889999988643 333 7899999999987632 11111 12346667777777654321 246899999999999
Q ss_pred HHHHHHhc------C-CC-CEEEEcCCCCCChHHHHHHcCC-------------EEEEecCCCCCCC-----------CC
Q 014172 169 LQAVLAVC------S-PG-DEVIIPAPFWVSYPEMARIADA-------------TPVILPTRISENF-----------LL 216 (429)
Q Consensus 169 ~~~l~~l~------~-~g-d~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~-----------~~ 216 (429)
+.+++... . +| .+|+...-+|.+....+..... .+..++....... .-
T Consensus 125 e~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 204 (461)
T PRK07482 125 ETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAY 204 (461)
T ss_pred HHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHH
Confidence 99988763 1 22 5788888888875433222111 1122221110000 00
Q ss_pred CHHHHHhhcc----cCCcEEEEcCCCCCccCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCC
Q 014172 217 DPKVLESKLT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 291 (429)
Q Consensus 217 d~e~l~~~l~----~~~~~i~l~~p~NPtG~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~ 291 (429)
+++.+++.+. +++.+|++...+.-.|.. .+.+.+++|.++|++| |+++|.||++.+|-..|... ....+.-..
T Consensus 205 ~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~-giLlI~DEV~tGfGRtG~~~-a~~~~gv~P 282 (461)
T PRK07482 205 CADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKY-DILLIADEVVTGFGRLGSMF-GSDHYGIEP 282 (461)
T ss_pred HHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHh-CCEEEEeccccCCCcCcchh-hHHhcCCCC
Confidence 3567777773 235566654445555766 5677899999999999 99999999999874333211 111111111
Q ss_pred CceEEEeccChhcccccc-eeeEEEcCHHHHHHHHHH-------hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHH
Q 014172 292 ERTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (429)
Q Consensus 292 ~~~i~~~S~SK~~~~~G~-R~G~v~~~~~~~~~l~~~-------~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~ 363 (429)
| +-+++|.++ .|. .+|.+++.+++.+.+... ....+++.++++.+++.+.|+. .++ +++.+.
T Consensus 283 D----iv~~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~---~~~--~~l~~~ 352 (461)
T PRK07482 283 D----LITVAKGLT-SAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDI---LER--ENLVGN 352 (461)
T ss_pred C----EEEEccccc-cCccccceeeecHHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHH---HHh--CCHHHH
Confidence 2 444899998 785 899999999988777521 1234566788898888888874 111 122333
Q ss_pred HHHHHHHHHHHhc----cCCCceeecCCceEEEEEecCCccCCcccCCCCC-CChHHHHHHHHHhCCeec
Q 014172 364 FRERRDFLVKSFG----ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKI-ENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 364 ~~~~r~~l~~~L~----~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~Ll~~~gV~v 428 (429)
.++.-+++.+.|+ +.+-+.-++..|-| +-+.+..... ..+.+... .-...++..|+++ ||.+
T Consensus 353 ~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm-~giel~~~~~-~~~~~~~~~~~~~~i~~~~~~~-Gvl~ 419 (461)
T PRK07482 353 AAEVGAYFRARLRAAFGDHPLVGEVRGVGML-AAVEFVADRD-DRTPFDPALKIGPQVSAAALER-GVIA 419 (461)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeeceeE-EEEEeccCCC-cCCCCChhhHHHHHHHHHHHHC-CcEE
Confidence 3344444444443 44333334455544 5565532100 00000000 0135678888776 7764
No 306
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.59 E-value=4e-13 Score=134.73 Aligned_cols=313 Identities=14% Similarity=0.144 Sum_probs=181.7
Q ss_pred hcCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 92 QAGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 92 ~~g~~~i~L~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
..|+..||+..|.. .++- +|.+.+++.+.+.+.. .+. -..+....+++.+.+..+ ...+.|.+++++++++
T Consensus 50 ~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~-~~~---~~~~~~~~la~~L~~~~~--~~~~~v~f~~SGsEA~ 123 (433)
T PRK00615 50 SLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGT-SYG---LTSEQEILFAEELFSYLG--LEDHKIRFVSSGTEAT 123 (433)
T ss_pred CCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCC-CCC---CCCHHHHHHHHHHHHhCC--CCcCEEEEeCchHHHH
Confidence 35788999988863 3444 7999999999887643 221 113445556666655443 1236899999999999
Q ss_pred HHHHHHhcC-CC-CEEEEcCCCCCChHHH----HHHcCCE---E-EEecCCC--CC----CCCCCHHHHHhhcc---cCC
Q 014172 169 LQAVLAVCS-PG-DEVIIPAPFWVSYPEM----ARIADAT---P-VILPTRI--SE----NFLLDPKVLESKLT---EKS 229 (429)
Q Consensus 169 ~~~l~~l~~-~g-d~Vlv~~p~y~~~~~~----~~~~g~~---~-~~v~~~~--~~----~~~~d~e~l~~~l~---~~~ 229 (429)
..+++.... .| ..|+...-+|.+.... ....+-. . ......+ .. .+ -|++.+++.+. ++.
T Consensus 124 e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~~~~~~ 202 (433)
T PRK00615 124 MTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPY-NDFQIFQTVMNSLGHRV 202 (433)
T ss_pred HHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCC-CCHHHHHHHHHhcCCce
Confidence 999887642 34 5788888888875421 1111100 0 0000000 00 01 16788888774 244
Q ss_pred cEEEEcCCCCCccCCC-CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccccc
Q 014172 230 RLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG 308 (429)
Q Consensus 230 ~~i~l~~p~NPtG~~~-~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 308 (429)
.+|++.......|... +.+.+++|.++|++| |+++|.||++.++. .|. ......+.-..| | .+|+|.+| .|
T Consensus 203 aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~-g~llI~DEv~tG~R-~G~-~ga~~~~gv~PD--i--~~~gK~lg-gG 274 (433)
T PRK00615 203 AGVIFEPICANMGVVLPKPGFIEGIIQTCRRT-GSLSIMDEVVTGFR-VAQ-GGAAAIYHVKPD--I--TVYGKILG-GG 274 (433)
T ss_pred EEEEECCCCCCCCcccCCHHHHHHHHHHHHHc-CCEEEEEccccccc-ccH-hHHHHhcCCCCC--e--EEEccccc-CC
Confidence 5666655566667755 467899999999999 99999999998762 332 111111111112 3 35899998 78
Q ss_pred ceeeEEEcCHHHHHHHHHHh---hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHH----HHHhccCCC-
Q 014172 309 WRLGYIAGPKHFVAACNKIQ---SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL----VKSFGELEG- 380 (429)
Q Consensus 309 ~R~G~v~~~~~~~~~l~~~~---~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l----~~~L~~l~g- 380 (429)
..+|++++++++++.+.... ...+++.++++.+++.+.|+.- ++ +..++..+++-+++ .+.+.+. |
T Consensus 275 ~p~~av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i---~~--~~~~~~~~~~g~~l~~~l~~~~~~~-g~ 348 (433)
T PRK00615 275 LPAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLC---RE--QGFYTQLSTLEQNFLSPIEEMIRSQ-GF 348 (433)
T ss_pred cceeeeeecHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHH---hc--ccHHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 88999999999998875321 2234456788888888888751 11 12233333444444 3333332 3
Q ss_pred -ceeecCCceEEEEEecCCccCCcc--cCCCCCCChHHHHHHHHHhCCeec
Q 014172 381 -VKMSEPQGAFYLFIDFSTYYGSEA--EGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 381 -~~~~~p~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.... .|.+ +.+.+......+. ...........+...|+++ ||.+
T Consensus 349 ~v~~~r-~G~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~ 396 (433)
T PRK00615 349 PVSLVR-YGSM-FSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSK-GVYL 396 (433)
T ss_pred CeEEEe-eceE-EEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHC-Ceee
Confidence 44444 4444 4555532100000 0000001134788888876 8875
No 307
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.59 E-value=4.8e-13 Score=131.18 Aligned_cols=232 Identities=14% Similarity=0.108 Sum_probs=157.2
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..+|+..|. ..+.. +|.+.+++.+.+++.. .+++. -..+....+++.+.+..+ .+.++++++++++++
T Consensus 22 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~-~~~~~-~~~~~~~~la~~l~~~~~----~~~v~~~~SGseA~e 95 (364)
T PRK04013 22 QGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLV-VAGPM-FEHEEKEEMLEELSKWVN----YEYVYMGNSGTEAVE 95 (364)
T ss_pred CCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcC-CccCC-cCCHHHHHHHHHHHhhcC----CCEEEEeCchHHHHH
Confidence 577899998875 33444 6888999999887632 12221 123445555666554433 358999999999999
Q ss_pred HHHHHhc-CCC-CEEEEcCCCCCChHHHHHHc--------CCE-----EEEecCCCCCCCCCCHHHHHhhcccCCcEEEE
Q 014172 170 QAVLAVC-SPG-DEVIIPAPFWVSYPEMARIA--------DAT-----PVILPTRISENFLLDPKVLESKLTEKSRLLIL 234 (429)
Q Consensus 170 ~~l~~l~-~~g-d~Vlv~~p~y~~~~~~~~~~--------g~~-----~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l 234 (429)
.+++... ..| ++|+..+.+|.+....+... +.. +..+| + .|++.+++.+.+++++|++
T Consensus 96 ~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~------~-~d~~~l~~~i~~~~aAviv 168 (364)
T PRK04013 96 AALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIP------F-NDVEAAKEAITKETAAVIF 168 (364)
T ss_pred HHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEec------C-CCHHHHHHHhcCCcEEEEE
Confidence 9988763 245 88999999888865443321 111 11222 1 2788899999888888888
Q ss_pred cCCCCCccC-CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeE
Q 014172 235 CSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY 313 (429)
Q Consensus 235 ~~p~NPtG~-~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~ 313 (429)
...+...|. ..+.+.+++|.++|++| |+++|.||++.++ ..|.. .....+.-..| +-+|+|.++ .|..+|.
T Consensus 169 Epi~g~gG~~~~~~~yl~~lr~lc~~~-gillI~DEv~tG~-RtG~~-~a~~~~gv~PD----iv~~gK~lg-gG~P~~a 240 (364)
T PRK04013 169 EPIQGEGGIVPAKEEFVKTLRDLTEDV-GALLIADEVQSGL-RTGKF-LAIEHYKVEPD----IVTMGKGIG-NGVPVSL 240 (364)
T ss_pred cCCcCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhcC-CCCch-hHHHhcCCCCC----EEEeccccc-CCceeEE
Confidence 766665565 44677899999999999 9999999999987 44421 11111111112 555799999 7899999
Q ss_pred EEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhc
Q 014172 314 IAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL 349 (429)
Q Consensus 314 v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~ 349 (429)
++.+.++. ......+++.++.+.+++.+.|+.
T Consensus 241 ~~~~~~~~----~~~~~~T~~gnp~~~aaa~a~l~~ 272 (364)
T PRK04013 241 TLTNFDVE----RGKHGSTFGGNPLACKAVAVTLRI 272 (364)
T ss_pred EEeccccc----CCCcCCCCCcCHHHHHHHHHHHHH
Confidence 99877652 122335666788888888888874
No 308
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.59 E-value=1.4e-12 Score=131.21 Aligned_cols=243 Identities=18% Similarity=0.214 Sum_probs=157.5
Q ss_pred hcCCCeEEcCCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 92 QAGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 92 ~~g~~~i~L~~g~~~--~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
..|+..||+..|... ++- +|.+.+++.+.+.+......+ .+....+++.+.+..+ ..+.+++++++++++
T Consensus 50 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~----~~~~~~la~~l~~~~p---~~~~v~f~~sGseA~ 122 (428)
T PRK12389 50 VDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLYGTP----TELEIEFAKMLKEAIP---SLEKVRFVNSGTEAV 122 (428)
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCccCCC----CHHHHHHHHHHHHhCC---CCcEEEEeCCHHHHH
Confidence 367889999887643 343 689999999998764322212 2445666666654432 246899999999999
Q ss_pred HHHHHHhcC-CC-CEEEEcCCCCCChHHHHHH-cCCEEEE--------ecCC-CCCC---CCCCHHHHHhhcc---cCCc
Q 014172 169 LQAVLAVCS-PG-DEVIIPAPFWVSYPEMARI-ADATPVI--------LPTR-ISEN---FLLDPKVLESKLT---EKSR 230 (429)
Q Consensus 169 ~~~l~~l~~-~g-d~Vlv~~p~y~~~~~~~~~-~g~~~~~--------v~~~-~~~~---~~~d~e~l~~~l~---~~~~ 230 (429)
..+++.... .| ..|+...-+|.+....+.. .|..... ++.. ..+. --.|++.+++.+. .++.
T Consensus 123 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~va 202 (428)
T PRK12389 123 MTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVA 202 (428)
T ss_pred HHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEE
Confidence 999887532 23 6788888888876543332 2211100 0000 0000 0027888888875 2455
Q ss_pred EEEEcCCCCCccCCC-CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccc
Q 014172 231 LLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGW 309 (429)
Q Consensus 231 ~i~l~~p~NPtG~~~-~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~ 309 (429)
+|++.......|.+. +.+.+++|.++|++| |+++|.||++.+|.. +.. .....+.-..| +.+|+|.++ .|.
T Consensus 203 avi~EPv~g~~G~~~p~~~yl~~l~~lc~~~-g~llI~DEV~tG~Rt-~~~-~a~~~~gv~PD----ivt~gK~lg-gG~ 274 (428)
T PRK12389 203 AVLVEPIVGNFGIVEPKPGFLEAVNELAHEA-GALVIYDEVITAFRF-MYG-GAQDLLGVEPD----LTALGKIIG-GGL 274 (428)
T ss_pred EEEEeCCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEEcccccccc-Ccc-hhhHHhCCCCC----eeeechhhc-CCC
Confidence 666655566678655 577899999999999 999999999998632 211 00111111112 457999998 889
Q ss_pred eeeEEEcCHHHHHHHHHH---hhcccCCCchHHHHHHHHHHhc
Q 014172 310 RLGYIAGPKHFVAACNKI---QSQFTSGASSISQKAGVAALGL 349 (429)
Q Consensus 310 R~G~v~~~~~~~~~l~~~---~~~~~~~~~~~~q~aa~~~l~~ 349 (429)
.+|.+++++++++.+... ....+++.++++.+++.+.|+.
T Consensus 275 Pi~av~~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~ 317 (428)
T PRK12389 275 PIGAYGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEV 317 (428)
T ss_pred ceeEEeEHHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHH
Confidence 999999999998887521 1223556788888888888875
No 309
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.58 E-value=9.9e-13 Score=120.18 Aligned_cols=285 Identities=16% Similarity=0.160 Sum_probs=196.7
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCC
Q 014172 110 PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFW 189 (429)
Q Consensus 110 p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y 189 (429)
|+.+.+++.. ....|.. +...++.+.+-+-++..|-. .++.-.++...++.+++.++..++.|||.|++..-.-
T Consensus 29 ~~~V~~A~~~----~~lgh~s-Pe~~qIm~~v~egikyVFkT-~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~ 102 (385)
T KOG2862|consen 29 SGRVQEAMSR----PSLGHMS-PEFVQIMDEVLEGIKYVFKT-ANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGT 102 (385)
T ss_pred CHHHHHhhcC----CccccCC-HHHHHHHHHHHHHHHHHhcc-CCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEech
Confidence 5555555443 3344532 22344444444444333332 2334566777788999999999999999998876543
Q ss_pred CC--hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE
Q 014172 190 VS--YPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (429)
Q Consensus 190 ~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi 266 (429)
.+ +.++++..|+++..++.+. +....+|+|.+.+.. +++++++++...-||+..+. ++.+.++|++| +.+++
T Consensus 103 wg~ra~D~~~r~ga~V~~v~~~~--G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~--~~~~g~lc~k~-~~lll 177 (385)
T KOG2862|consen 103 WGQRAADCARRYGAEVDVVEADI--GQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDL--LAISGELCHKH-EALLL 177 (385)
T ss_pred HHHHHHHHHHhhCceeeEEecCc--ccCccHHHHHHHHHhcCCceEEEEecCccccccchH--HHHHHHHhhcC-CeEEE
Confidence 33 4578999999999997654 445899999998864 78999999999999999883 55677899999 89999
Q ss_pred EccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhh-----------------
Q 014172 267 SDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS----------------- 329 (429)
Q Consensus 267 ~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~----------------- 329 (429)
+|.+-+- |.. .+ .++ .++..+....--|+++.| ..++-+..++...++++..+.
T Consensus 178 VD~VaSl----ggt--~F-~mD-ewgVDvaytgSQKaL~aP-~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wg 248 (385)
T KOG2862|consen 178 VDTVASL----GGT--EF-EMD-EWGVDVAYTGSQKALGAP-AGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWG 248 (385)
T ss_pred Eechhhc----CCc--cc-eeh-hhcccEEEecchhhcCCC-CCcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhc
Confidence 9998764 111 11 223 267777777777999843 345667778887777754432
Q ss_pred ------cccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeec----CCceEEEEEecCCc
Q 014172 330 ------QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE----PQGAFYLFIDFSTY 399 (429)
Q Consensus 330 ------~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~----p~~~~~~~~~l~~~ 399 (429)
.+...++....+...++|.. ..++.+++..++.++..+++...|+++ |++... +...---.+.+|..
T Consensus 249 c~~e~~~yhhT~pv~lly~Lr~AL~~--I~eeGL~~~~~rH~e~s~~l~~~l~~~-GLq~fv~~e~~rlptvttv~vp~g 325 (385)
T KOG2862|consen 249 CDGEPRAYHHTPPVQLLYSLRAALAL--IAEEGLENSWRRHREMSKWLKLSLEAL-GLQLFVVDEELRLPTVTTVKVPYG 325 (385)
T ss_pred cCCcccccccCCcHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHh-CccceecChhhccCcceeeecCCC
Confidence 12334566666666777764 136889999999999999999999998 765431 11222234666654
Q ss_pred cCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 400 YGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.|-.+++.+++.+++|.+
T Consensus 326 -----------vDw~dVv~~~~~~~~vei 343 (385)
T KOG2862|consen 326 -----------VDWKDVVAYAMSHYVVEI 343 (385)
T ss_pred -----------CCHHHHHHHHHHhcCEEe
Confidence 478899999999987764
No 310
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.58 E-value=1.7e-12 Score=130.89 Aligned_cols=314 Identities=15% Similarity=0.131 Sum_probs=184.9
Q ss_pred hcCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 92 QAGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 92 ~~g~~~i~L~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
..|+.+||+..|.. .++- +|++.+++.+.+.+..+.. ...-..+....+|+.+.+..+.. ..+.+++++++++++
T Consensus 51 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~-~~~~~~~~~~~lAe~L~~~~p~~-~~~~v~f~~SGsEA~ 128 (441)
T PRK05769 51 VDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYS-LTDFYYEPAVELAERLVEIAPGG-FEKKVFFTNSGTESN 128 (441)
T ss_pred CCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCcc-CcccCCHHHHHHHHHHHHhCCCC-CCCEEEECCchHHHH
Confidence 35788999988863 3443 6889999999987632211 11112345666777776543210 136899999999999
Q ss_pred HHHHHHhcC-CC-CEEEEcCCCCCChHHHHHHc-CC-------------EEEEecCCCCCC--CC---------CCHHHH
Q 014172 169 LQAVLAVCS-PG-DEVIIPAPFWVSYPEMARIA-DA-------------TPVILPTRISEN--FL---------LDPKVL 221 (429)
Q Consensus 169 ~~~l~~l~~-~g-d~Vlv~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~~~--~~---------~d~e~l 221 (429)
..+++.... .| .+|+...-+|.+....+... |. .+..++....-. +. -+++.+
T Consensus 129 e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 208 (441)
T PRK05769 129 EAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFI 208 (441)
T ss_pred HHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHH
Confidence 999886532 23 67888888888766433322 21 122333211000 00 012345
Q ss_pred Hh-hcc-----cCCcEEEEcCCCCCccCCC-CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCce
Q 014172 222 ES-KLT-----EKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERT 294 (429)
Q Consensus 222 ~~-~l~-----~~~~~i~l~~p~NPtG~~~-~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~ 294 (429)
++ .++ +++.+|++...+...|... +.+.+++|.++|++| |+++|.||++.++...|.. .....+.-..+
T Consensus 209 e~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~-g~lli~DEv~tG~gr~G~~-~a~~~~gv~pD-- 284 (441)
T PRK05769 209 EDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKY-GILLIDDEVQTGMGRTGKM-FAIEHFGVEPD-- 284 (441)
T ss_pred HHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhCCCcccce-ehhhccCCCCC--
Confidence 55 221 2455555554566667654 577899999999999 9999999999976444421 11122211112
Q ss_pred EEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHH
Q 014172 295 LTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKS 374 (429)
Q Consensus 295 i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~ 374 (429)
+ .+|+|.++ .|+++|++++++++++.+.. ....+++.+++++.++.+.|+. .++ +..+..+++-+++.+.
T Consensus 285 i--vt~~K~l~-~G~p~gav~~~~~i~~~~~~-~~~~T~~g~p~~~aaa~a~L~~---l~~---~~~~~~~~~g~~l~~~ 354 (441)
T PRK05769 285 I--ITLAKAIA-GGLPLGAVIGRAELMFLPPG-SHANTFGGNPVAAAAALATLEE---LEE---GLLENAQKLGEYLRKE 354 (441)
T ss_pred E--EEEccccc-CCcccEEEEEehhhhhcCCC-CCCCCCCcCHHHHHHHHHHHHH---HHH---HHHHHHHHHHHHHHHH
Confidence 3 35899999 89999999999988754322 2233445688888888888875 222 5556666666677776
Q ss_pred hccC----CCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 375 FGEL----EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 375 L~~l----~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|+++ +-+.-+...| .++-+.+..... +. .......+.+.|+++ ||.+
T Consensus 355 L~~l~~~~~~~~~vrg~G-~~~~i~~~~~~~---~~--~~~~~~~~~~~~~~~-Gil~ 405 (441)
T PRK05769 355 LKELKEKYEFIGDVRGLG-LMIGVELVKDRK---EP--DPKLRDKVLYEAFKR-GLLL 405 (441)
T ss_pred HHHHHHhCCCeeeeecce-EEEEEEeccCCc---cc--cHHHHHHHHHHHHhC-CcEE
Confidence 6553 2122223334 435555532100 00 000234677777765 7765
No 311
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.58 E-value=6.8e-13 Score=133.00 Aligned_cols=308 Identities=13% Similarity=0.070 Sum_probs=184.1
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..||+..|. ..++- +|++.+++.+++.+..+.. ...-..+.+..+++.+.+..+ ...+.++++++++++++
T Consensus 41 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~-~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~SGsEAve 117 (428)
T PRK07986 41 DGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVM-FGGITHPPAIELCRKLVAMTP--QPLECVFLADSGSVAVE 117 (428)
T ss_pred CCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCcc-ccccCCHHHHHHHHHHHhhCC--CCcCEEEEeCCcHHHHH
Confidence 578899998875 33333 6899999999887532111 111124556667777765543 12368999999999999
Q ss_pred HHHHHhcC------C-CCEEEEcCCCCCChHHHHHHc-CC-------------EEEEecCCCCC---CC-CCCHHHHHhh
Q 014172 170 QAVLAVCS------P-GDEVIIPAPFWVSYPEMARIA-DA-------------TPVILPTRISE---NF-LLDPKVLESK 224 (429)
Q Consensus 170 ~~l~~l~~------~-gd~Vlv~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~~---~~-~~d~e~l~~~ 224 (429)
.+++.... . ..+|+....+|.+....+... +. .++.+|..... .+ .-|++.+++.
T Consensus 118 ~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~ 197 (428)
T PRK07986 118 VAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARL 197 (428)
T ss_pred HHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHH
Confidence 99887542 2 367888888888754332221 21 11222221100 00 0156677777
Q ss_pred cc---cCCcEEEEcCC-CCCccC-CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEec
Q 014172 225 LT---EKSRLLILCSP-SNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNG 299 (429)
Q Consensus 225 l~---~~~~~i~l~~p-~NPtG~-~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S 299 (429)
+. ++..+|++... +.-.|. ..+++.+++|.++|++| |+++|.||++.++...|.. .....+.-.. .|+ +
T Consensus 198 l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~-g~lLI~DEv~tG~GrtG~~-fa~~~~gv~P--Di~--t 271 (428)
T PRK07986 198 MAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDRE-GILLIADEIATGFGRTGKL-FACEHAGIAP--DIL--C 271 (428)
T ss_pred HHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHc-CCEEEEeccccCCccCCCe-eeecccCCCC--CEE--E
Confidence 74 23445555442 444565 44668899999999999 9999999999775333321 1111111111 233 5
Q ss_pred cChhccccc-ceeeEEEcCHHHHHHHHHH-----hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHH
Q 014172 300 FSKAFAMTG-WRLGYIAGPKHFVAACNKI-----QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVK 373 (429)
Q Consensus 300 ~SK~~~~~G-~R~G~v~~~~~~~~~l~~~-----~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~ 373 (429)
|+|.++ .| ..+|.+++++++++.+... ....+++.++++.+++.+.|+. .++. ++++..+++-+++.+
T Consensus 272 ~gK~l~-gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~---i~~~--~~~~~~~~~g~~l~~ 345 (428)
T PRK07986 272 LGKALT-GGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSL---LESG--DWQQQVAAIEAQLRE 345 (428)
T ss_pred echhhh-CCcccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHH---HHhC--CHHHHHHHHHHHHHH
Confidence 999998 78 5888889999999888642 1234555678888888887764 1111 234444444455555
Q ss_pred HhccC---CCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 374 SFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 374 ~L~~l---~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.|+++ +.+.-++..|- ++-+.+... .....+.+.|+++ ||.+
T Consensus 346 ~l~~l~~~~~i~~vRg~Gl-~~~ve~~~~-----------~~~~~~~~~l~~~-Gl~~ 390 (428)
T PRK07986 346 ELAPLRDAPMVADVRVLGA-IGVVETTRP-----------VNMAALQRFFVEQ-GVWI 390 (428)
T ss_pred HHHHHhcCCCEEeEeccce-EEEEEeCCc-----------ccHHHHHHHHHHC-CcEE
Confidence 55543 33333334444 355655421 1356788888766 8865
No 312
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.57 E-value=6.4e-13 Score=129.66 Aligned_cols=317 Identities=15% Similarity=0.137 Sum_probs=198.9
Q ss_pred HHHHHHHHhcCCCeEEcCCCC---------CCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCC
Q 014172 84 TDQATALAQAGVSVIRLAAGE---------PDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYT 154 (429)
Q Consensus 84 ~~~~~~~~~~g~~~i~L~~g~---------~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~ 154 (429)
.++.+.+++.|.+...|...+ -.-.+.+...+++.. +.-.|+.++...+|.+.+++.+.
T Consensus 21 e~R~~~l~~agyN~f~l~s~dV~IDLrSDTgT~apS~~m~aAM~~----GDD~Y~gdpSv~~Lee~vael~G-------- 88 (467)
T TIGR02617 21 AYREKAIIKAGMNPFLLDSEDVFIDLLTDSGTGAVTQSMQAAMMR----GDEAYSGSRSYYALAESVKNIFG-------- 88 (467)
T ss_pred HHHHHHHHHcCCCcccCCCCCeEEECccCCCCCCCCHHHHHHHHc----CCcccccCchHHHHHHHHHHHhC--------
Confidence 345555666666554444444 221234555565553 56679888888999999999873
Q ss_pred CCcEEEecChHHHHHHHHHHhcC-CCCEEEEcCC-------C-CCChHHHHHHcCCEEEEecCC--------CCCCCCCC
Q 014172 155 PDQILVSNGAKQSILQAVLAVCS-PGDEVIIPAP-------F-WVSYPEMARIADATPVILPTR--------ISENFLLD 217 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~-~gd~Vlv~~p-------~-y~~~~~~~~~~g~~~~~v~~~--------~~~~~~~d 217 (429)
.+.++.|..++.+-..+++.+++ |||++++..+ . |......+.+.|+.++.++.+ ....+.+|
T Consensus 89 ~E~alpthqGRgaE~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~d 168 (467)
T TIGR02617 89 YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFD 168 (467)
T ss_pred CceEEECCCCchHHHHHHHhhcccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcC
Confidence 45678888888888988999998 7888775553 2 223346788899998886432 11235689
Q ss_pred HHHHHhhccc----CCcEEEEcCCCC-CccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcc-ccc------CCCCCCccc
Q 014172 218 PKVLESKLTE----KSRLLILCSPSN-PTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIY------APATHTSFA 285 (429)
Q Consensus 218 ~e~l~~~l~~----~~~~i~l~~p~N-PtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~-~~~------~~~~~~~~~ 285 (429)
+++|+++|++ +...+...--+| -.|.++|.+.++++.++|++| |+.++.|.+--. -.+ .+....++.
T Consensus 169 l~~le~~I~~~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~-GIplhLDgARl~nNA~fIk~rE~~a~~~si~ 247 (467)
T TIGR02617 169 LEGLERGIEEVGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKY-DIPVVMDSARFAENAYFIKQREAEYKNWSIE 247 (467)
T ss_pred HHHHHHHHhhcCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHc-CCcEEEEhHHHHHHhhhhhhcchhhcCCCHH
Confidence 9999999974 222332211233 358999999999999999999 999999986321 011 011122333
Q ss_pred cCCC--CCCceEEEeccChhcccc-cceeeEEEcCHH----HHHHHHHHh-----hcccCCCchHHHHHHHHHHhcCCCC
Q 014172 286 SLPG--MWERTLTVNGFSKAFAMT-GWRLGYIAGPKH----FVAACNKIQ-----SQFTSGASSISQKAGVAALGLGYAG 353 (429)
Q Consensus 286 ~~~~--~~~~~i~~~S~SK~~~~~-G~R~G~v~~~~~----~~~~l~~~~-----~~~~~~~~~~~q~aa~~~l~~~~~~ 353 (429)
.+.. ...-+.+..|+||.++.+ | |+++++++ +.+.++... .....+.+.-...++..-|.+.. .
T Consensus 248 eI~rE~~~~aDsvt~slsKglgApvG---g~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~-~ 323 (467)
T TIGR02617 248 QITRETYKYADMLAMSAKKDAMVPMG---GLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGM-N 323 (467)
T ss_pred HHHHHhhccCCEEEEEcCCCCCCccc---ceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcc-c
Confidence 2210 012226677899999866 4 66777654 333333221 12233456666666665565532 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCcc-CCcccCCCCCCChHHHHHHHHHhCCee
Q 014172 354 GEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYY-GSEAEGFGKIENSESLCRYLLDKAQVL 427 (429)
Q Consensus 354 ~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~Ll~~~gV~ 427 (429)
++++..... ..++|.+.|.+. |+.++. .||.-++++..... +.....| .+..++-.|..+.||-
T Consensus 324 ~~yl~~ri~----qv~yl~~~L~~~-Gvpi~~-~Gghav~iDa~~~lphip~~~f----pa~al~~~ly~~~GiR 388 (467)
T TIGR02617 324 LDWLAYRIN----QVQYLVNGLEEI-GVVCQQ-AGGHAAFVDAGKLLPHIPADQF----PAHALACELYKVAGIR 388 (467)
T ss_pred HHHHHHHHH----HHHHHHHHHHhC-CCcEEe-cCccEEEEehhhhCCCCChhhC----cHHHHHHHHHHHcCcc
Confidence 455544443 445677777776 898887 88888888765431 1122333 6889999999998874
No 313
>PRK07046 aminotransferase; Validated
Probab=99.57 E-value=3e-12 Score=129.32 Aligned_cols=261 Identities=15% Similarity=0.104 Sum_probs=163.9
Q ss_pred cCCCeEEcCCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~~~--~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..||+..|... ++- +|.+.+++.+++.++.. ++ ...+....+++.+.+..+ .+.+.++++++++..
T Consensus 73 DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~-~~---~~~~~~~~lAe~l~~~~~----~~~v~F~nSGtEA~e 144 (453)
T PRK07046 73 DGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLT-TM---LPSEDAAWVGEELARRFG----LPYWQVATTATDANR 144 (453)
T ss_pred CCCEEEEecccccccccCCCCHHHHHHHHHHHHhCCC-CC---CCCHHHHHHHHHHHHHhC----CCEEEEECCHHHHHH
Confidence 57889999877633 333 68999999999886532 21 123555666666665542 468999999999999
Q ss_pred HHHHHhcC-CC-CEEEEcCCCCCChHHHHHH--cCCE-----------------EEEecCCCCCCCCCCHHHHHhhccc-
Q 014172 170 QAVLAVCS-PG-DEVIIPAPFWVSYPEMARI--ADAT-----------------PVILPTRISENFLLDPKVLESKLTE- 227 (429)
Q Consensus 170 ~~l~~l~~-~g-d~Vlv~~p~y~~~~~~~~~--~g~~-----------------~~~v~~~~~~~~~~d~e~l~~~l~~- 227 (429)
.+++.... .| +.|+...-+|.+....... .+.+ +..+| | -|++.+++.+..
T Consensus 145 ~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~-nd~~~l~~~l~~~ 217 (453)
T PRK07046 145 FVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE------F-NDLAALEAALADG 217 (453)
T ss_pred HHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC------C-CCHHHHHHHhCCC
Confidence 99887532 23 6788888888886432221 1110 11111 1 178999988853
Q ss_pred CCcEEEEcCCCCCccCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccc
Q 014172 228 KSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 306 (429)
+..+|++...+.-.|.+ .+.+.+++|.++|++| |+++|.||+.. |..+-........+. .| +.+|+|.+|
T Consensus 218 ~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~-g~llI~DEV~t-fr~g~Gg~~~~~gv~--PD----i~t~gK~lg- 288 (453)
T PRK07046 218 DVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRY-GTLLVIDETHT-ISSGPGGYTRAHGLE--PD----FLVVGKPIA- 288 (453)
T ss_pred CeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHh-CCEEEEEcccc-CccCCcchhHHhCCC--cc----ceeehhhhc-
Confidence 45555554334434544 4556899999999999 99999999987 322211111111111 12 446899999
Q ss_pred ccceeeEEEcCHHHHHHHHHH---------hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 014172 307 TGWRLGYIAGPKHFVAACNKI---------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 377 (429)
Q Consensus 307 ~G~R~G~v~~~~~~~~~l~~~---------~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 377 (429)
.|..+|.+++++++++.+... ....+++.++++.+++.+.|+.-. .++.+++..+.-+..++.+.+.+.+
T Consensus 289 gG~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~-~~~~~~~~~~~g~~l~~~L~~l~~~ 367 (453)
T PRK07046 289 GGVPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVM-TEAAYAHMLALAARLAAGLRAVIAR 367 (453)
T ss_pred CCCcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999887632 112355678888888888887411 1233344444334444444444444
Q ss_pred C
Q 014172 378 L 378 (429)
Q Consensus 378 l 378 (429)
.
T Consensus 368 ~ 368 (453)
T PRK07046 368 H 368 (453)
T ss_pred C
Confidence 4
No 314
>PLN02263 serine decarboxylase
Probab=99.57 E-value=3.8e-12 Score=126.83 Aligned_cols=250 Identities=12% Similarity=0.034 Sum_probs=172.4
Q ss_pred CCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcC--CCCEEEEcCCCCCChHHHHHHcCCEEEEecCCC
Q 014172 133 GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS--PGDEVIIPAPFWVSYPEMARIADATPVILPTRI 210 (429)
Q Consensus 133 G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~ 210 (429)
+..++.+.+-+|+.+.+|.+-+.-.=++|+|||+++..++.+-.+ +...|++++-+|.+...+++.+|.+++.||++
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d- 208 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTL- 208 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccC-
Confidence 568999999999999999532122358899999999988877654 33578899999999999999999999999986
Q ss_pred CCCCCCCHHHHHhhcccC---CcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCe-----EEEEccCCcccccCC-CCC
Q 014172 211 SENFLLDPKVLESKLTEK---SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL-----LVLSDEIYEHIIYAP-ATH 281 (429)
Q Consensus 211 ~~~~~~d~e~l~~~l~~~---~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i-----~vi~Deay~~~~~~~-~~~ 281 (429)
.++.+|++.|+++|..+ +-+|+.+.++-++|++=| +++|.++|++| |+ |+.+|.+|+++...- ...
T Consensus 209 -~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDp---i~eIa~i~~~~-g~~~~~iwlHVDAA~GG~~lPf~~~~ 283 (470)
T PLN02263 209 -VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDD---LDLVIKTLEEC-GFSQDRFYIHCDGALFGLMMPFVKRA 283 (470)
T ss_pred -CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCC---HHHHHHHHHHc-CCccCCeeEEEeccchhhHhhhcccc
Confidence 45679999999988654 334556778889999988 99999999999 86 999999998764310 111
Q ss_pred CccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhc-----ccCCCchHHHHHHHHHHhcCCCChHH
Q 014172 282 TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ-----FTSGASSISQKAGVAALGLGYAGGEV 356 (429)
Q Consensus 282 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~-----~~~~~~~~~q~aa~~~l~~~~~~~~~ 356 (429)
+.+ .+. ....=+..+.+|.++ .....|.++..++.++.+.....+ .+...+.....++..+......+.+.
T Consensus 284 ~~~-df~--~~vDSIsvD~HK~l~-~P~~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~G 359 (470)
T PLN02263 284 PKV-TFK--KPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRG 359 (470)
T ss_pred ccc-CCC--cCccEEEECCccccC-CCcCEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHHH
Confidence 111 111 122235667889987 668899998887655443221111 11112222222222222211125677
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCce-eecCCceEEEE
Q 014172 357 VSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLF 393 (429)
Q Consensus 357 ~~~~~~~~~~~r~~l~~~L~~l~g~~-~~~p~~~~~~~ 393 (429)
+.++.+..-++.+++.+.|++. |+. +..|.....+|
T Consensus 360 ~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~~V~f 396 (470)
T PLN02263 360 FQKEVQKCLRNAHYLKDRLREA-GISAMLNELSSTVVF 396 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCceEEEE
Confidence 8888888888999999999988 554 44566655333
No 315
>PLN02880 tyrosine decarboxylase
Probab=99.56 E-value=1.8e-12 Score=131.97 Aligned_cols=276 Identities=13% Similarity=0.098 Sum_probs=180.4
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCC-----CCcEEEecChHHHHHHHHHHhcC--------
Q 014172 111 VLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYT-----PDQILVSNGAKQSILQAVLAVCS-------- 177 (429)
Q Consensus 111 ~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~-----~~~i~~t~G~~~al~~~l~~l~~-------- 177 (429)
..+.+.+...+......|...+...++.+.+.+|+.+.+|.+-. ...-++|+|+++++..++.+..+
T Consensus 97 ~~lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~ 176 (490)
T PLN02880 97 GFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGK 176 (490)
T ss_pred HHHHHHHHHhhccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcc
Confidence 34444555555443344555567889999999999999996421 02367889999888776655421
Q ss_pred ---CCCEEEEcCCCCCChHHHHHHcCCE---EEEecCCCCCCCCCCHHHHHhhccc------CCcEEEEcCCCCCccCCC
Q 014172 178 ---PGDEVIIPAPFWVSYPEMARIADAT---PVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVY 245 (429)
Q Consensus 178 ---~gd~Vlv~~p~y~~~~~~~~~~g~~---~~~v~~~~~~~~~~d~e~l~~~l~~------~~~~i~l~~p~NPtG~~~ 245 (429)
+.-.|++++-+|.+...++..+|+. ++.||++..+++.+|++.|++++.+ .+-+|+-+...-.||.+-
T Consensus 177 ~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiD 256 (490)
T PLN02880 177 NALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVD 256 (490)
T ss_pred cccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccC
Confidence 1124667888999999999999994 7889987656778999999999864 134455567778899999
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccc-cCCCCCCceEEEeccChhcccccceeeEEEcCH--HHHH
Q 014172 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA-SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK--HFVA 322 (429)
Q Consensus 246 ~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~-~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~--~~~~ 322 (429)
| +++|+++|++| |+|+++|.+|+.+..... .+. .+.+...-.-+..+++|.+. ....+|+++..+ .+++
T Consensus 257 p---l~eI~~i~~~~-~iwlHVDaA~gg~~~~~~---~~~~~l~gie~aDSit~d~HKwl~-~P~~~g~llvr~~~~l~~ 328 (490)
T PLN02880 257 P---LLELGKIAKSN-GMWFHVDAAYAGSACICP---EYRHYIDGVEEADSFNMNAHKWFL-TNFDCSLLWVKDRNALIQ 328 (490)
T ss_pred c---HHHHHHHHHHc-CCEEEEehhhHHHHHhCH---HHHHHhcCchhcCEEEECchhhcC-CCccEEEEEEeCHHHHHH
Confidence 9 99999999999 999999999997643211 111 11221233467888999996 667889888753 2223
Q ss_pred HHHHHhhccc----------------C-CCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeec
Q 014172 323 ACNKIQSQFT----------------S-GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 385 (429)
Q Consensus 323 ~l~~~~~~~~----------------~-~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~ 385 (429)
.+..-..+.. . +...+....+-..|.. .+.+.+.++.+..-+..+++.+.+++.+++++..
T Consensus 329 ~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~--~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~ 406 (490)
T PLN02880 329 SLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRL--YGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVT 406 (490)
T ss_pred HHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEec
Confidence 2221110000 0 0011111111111222 1456677777777788999999999888888875
Q ss_pred C-CceEEEEEecC
Q 014172 386 P-QGAFYLFIDFS 397 (429)
Q Consensus 386 p-~~~~~~~~~l~ 397 (429)
| +.++ +.++++
T Consensus 407 ~~~~~i-v~Fr~~ 418 (490)
T PLN02880 407 PRIFSL-VCFRLV 418 (490)
T ss_pred CCceEE-EEEEEe
Confidence 4 5555 556665
No 316
>PRK07678 aminotransferase; Validated
Probab=99.56 E-value=2e-12 Score=130.77 Aligned_cols=319 Identities=16% Similarity=0.118 Sum_probs=183.0
Q ss_pred cCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..||+..|.. .++. +|++.+++.+.+.+.. |.......+....+++.+.+..+ ..+.+++++++++++.
T Consensus 45 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~--~~~~~~~~~~~~~lae~l~~~~~---~~~~v~f~~sGseA~e 119 (451)
T PRK07678 45 QGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLS--YFPLTQSHEPAIKLAEKLNEWLG---GEYVIFFSNSGSEANE 119 (451)
T ss_pred CCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcC--ccccccCCHHHHHHHHHHHHhCC---CCCEEEEeCCcHHHHH
Confidence 5788999988752 3343 7899999999887532 21111123445566666665543 2358999999999999
Q ss_pred HHHHHhcC-------CC-CEEEEcCCCCCChHHHHHHc-CC------------EEEEecCCCCCC--CC-----CC---H
Q 014172 170 QAVLAVCS-------PG-DEVIIPAPFWVSYPEMARIA-DA------------TPVILPTRISEN--FL-----LD---P 218 (429)
Q Consensus 170 ~~l~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~~~--~~-----~d---~ 218 (429)
.+++.... +| ..|+...-+|.+....+... |. .+..+|...... +. -+ +
T Consensus 120 ~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (451)
T PRK07678 120 TAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECV 199 (451)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHH
Confidence 88887531 23 57888888888765443322 11 112222211000 00 01 2
Q ss_pred HHHHhhcc----cCCcEEEEcCCCCCccCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCc
Q 014172 219 KVLESKLT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 293 (429)
Q Consensus 219 e~l~~~l~----~~~~~i~l~~p~NPtG~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~ 293 (429)
+.+++.+. +++.+|++...+.-.|.+ .+++.+++|.++|++| |+++|.||++.+|...|.. ..+..+.-..|
T Consensus 200 ~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~-g~llI~DEV~tGfGRtG~~-~~~~~~gv~PD- 276 (451)
T PRK07678 200 KEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKH-GALLISDEVICGFGRTGKA-FGFMNYGVKPD- 276 (451)
T ss_pred HHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEeehhhcCCcCchh-HHHHhcCCCCC-
Confidence 23555553 345566665445445655 5677899999999999 9999999999876433321 11111211112
Q ss_pred eEEEeccChhccccc-ceeeEEEcCHHHHHHHHHH------hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 014172 294 TLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRE 366 (429)
Q Consensus 294 ~i~~~S~SK~~~~~G-~R~G~v~~~~~~~~~l~~~------~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~ 366 (429)
+-+|+|.+| .| +.+|.+++++++.+.+... ....+++.++++.+++.+.|+.-. .++.+++..+.-+.
T Consensus 277 ---ivt~gK~lg-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~-~~~~~~~~~~~g~~ 351 (451)
T PRK07678 277 ---IITMAKGIT-SAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIME-NENLIERSAQLGEL 351 (451)
T ss_pred ---EEEeecccc-cCCcceeEEEEcHHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHH-hCCHHHHHHHHHHH
Confidence 446899998 67 6999999999998887531 234566778888888888887511 01222333333333
Q ss_pred HHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 367 RRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 367 ~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.++.+.+.+++.+.+.-+...|.| +-+.+.......... .......++..|+++ ||.+
T Consensus 352 l~~~l~~~~~~~~~v~~vrg~Gl~-~~i~~~~~~~~~~~~--~~~~a~~i~~~l~~~-Gv~~ 409 (451)
T PRK07678 352 LLEQLKEELGEHPLVGDIRGKGLL-VGIELVNDKETKEPA--DNDKVASVVAACKEK-GLII 409 (451)
T ss_pred HHHHHHHHHhcCCCEEEEEeeceE-EEEEEecCCcccCcC--chHHHHHHHHHHHHC-CcEE
Confidence 344444444444333334455544 445542110000000 001145677777776 8865
No 317
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.55 E-value=2.3e-12 Score=131.54 Aligned_cols=319 Identities=12% Similarity=0.081 Sum_probs=184.8
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCC-CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPN-AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~-~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
.|+.+||+..|. ..++- +|.+.+++.+.+.+... +... .+..+....+++.+.+.+.. ...+.++++++|++++
T Consensus 87 dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~-~~~~~~~~~~~~~~lae~L~~~~~~-~~~~~v~f~~SGsEA~ 164 (504)
T PLN02760 87 NGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPF-YHSFWNRTTKPSLDLAKELLEMFTA-RKMGKVFFTNSGSEAN 164 (504)
T ss_pred CCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccc-eecccccCcHHHHHHHHHHHhhcCC-CCCCEEEEeCChHHHH
Confidence 578899998875 34444 78999999999876321 1111 23456667777776654321 1235799999999999
Q ss_pred HHHHHHhc-------CCC-CEEEEcCCCCCChHH-HHHHcCCE------------EEEecCCCCCC----C-------CC
Q 014172 169 LQAVLAVC-------SPG-DEVIIPAPFWVSYPE-MARIADAT------------PVILPTRISEN----F-------LL 216 (429)
Q Consensus 169 ~~~l~~l~-------~~g-d~Vlv~~p~y~~~~~-~~~~~g~~------------~~~v~~~~~~~----~-------~~ 216 (429)
..+++... .++ ..|+..+-+|.+... .+...|.. +..++.+.... + ..
T Consensus 165 e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 244 (504)
T PLN02760 165 DTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTR 244 (504)
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHH
Confidence 99998763 133 578888877776543 33333321 11222110000 0 00
Q ss_pred CHHHHHhhcc----cCCcEEEEcCCCCCccCCC-CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCC
Q 014172 217 DPKVLESKLT----EKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 291 (429)
Q Consensus 217 d~e~l~~~l~----~~~~~i~l~~p~NPtG~~~-~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~ 291 (429)
..+++++.+. +++.+|++.......|.+. +.+.+++|.++|++| |+++|.||++.+|-..|... ....+.-..
T Consensus 245 ~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~-g~lLI~DEV~TGfGRtG~~~-a~e~~gv~P 322 (504)
T PLN02760 245 LADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKY-DILFIADEVICAFGRLGTMF-GCDKYNIKP 322 (504)
T ss_pred HHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEecchhhCCcccchhh-HHHhcCCCC
Confidence 1244666553 2344555554555567654 677899999999999 99999999997763333211 111111111
Q ss_pred CceEEEeccChhccccc-ceeeEEEcCHHHHHHHHHH-------hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHH
Q 014172 292 ERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (429)
Q Consensus 292 ~~~i~~~S~SK~~~~~G-~R~G~v~~~~~~~~~l~~~-------~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~ 363 (429)
| +.+|+|.+| .| ..+|.+++++++++.+... ....+++.++++.+++.+.|+. .++ +++.+.
T Consensus 323 D----ivtlgK~lg-gG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~---i~~--~~l~~~ 392 (504)
T PLN02760 323 D----LVSLAKALS-SAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKI---YKE--RNIPEH 392 (504)
T ss_pred c----EEEeccccc-CCccccceEeecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHH---HHh--CCHHHH
Confidence 2 677999998 66 4899999999999887531 2344666788888888888875 121 133444
Q ss_pred HHHHHHHHHHHhccC---CCceeecCCceEEEEEecCCccCCcccCCCC-CCChHHHHHHHHHhCCeec
Q 014172 364 FRERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK-IENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 364 ~~~~r~~l~~~L~~l---~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~Ll~~~gV~v 428 (429)
.+++-+++.+.|+++ +-+.-+...|.| +-+.+....... +.+.. ..-...+.+.|+++ ||.+
T Consensus 393 ~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~-~gie~~~~~~~~-~~~~~~~~~~~~i~~~~~~~-Gvl~ 458 (504)
T PLN02760 393 VNKIAPRFQDGIKAFSGSPIIGEIRGTGLI-LGTEFVDNKSPN-DPFPAEWGVGAYFGAECKKR-GMLV 458 (504)
T ss_pred HHHHHHHHHHHHHHHhcCCCeeeEEeCceE-EEEEEecCCccc-ccccchhHHHHHHHHHHHhC-CcEE
Confidence 444555555555443 222223445544 455553210000 00000 00134577777766 8764
No 318
>PRK05965 hypothetical protein; Provisional
Probab=99.55 E-value=2.9e-12 Score=129.82 Aligned_cols=320 Identities=13% Similarity=0.123 Sum_probs=185.3
Q ss_pred hcCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 92 QAGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 92 ~~g~~~i~L~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
..|+..||+..|.. .++- +|++.+++.+++.+..+.........+.+..+++.+.+.... ..+.+++++++++++
T Consensus 43 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~sGSEAv 120 (459)
T PRK05965 43 ASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPG--SLNHVYFTLGGSDAV 120 (459)
T ss_pred CCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCC--CcCEEEEeCChhHHH
Confidence 35788999988753 3333 789999999998753211100011234555677776654321 346899999999999
Q ss_pred HHHHHHhcC-------CC-CEEEEcCCCCCChHHHH-HHcCC------------EEEEecCCCC--CCCCCC--------
Q 014172 169 LQAVLAVCS-------PG-DEVIIPAPFWVSYPEMA-RIADA------------TPVILPTRIS--ENFLLD-------- 217 (429)
Q Consensus 169 ~~~l~~l~~-------~g-d~Vlv~~p~y~~~~~~~-~~~g~------------~~~~v~~~~~--~~~~~d-------- 217 (429)
+.+++.... ++ .+|+....+|.+....+ ...|. .+..++.... ..+.-|
T Consensus 121 e~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (459)
T PRK05965 121 DSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAAS 200 (459)
T ss_pred HHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHH
Confidence 999887531 22 56888888888764322 22111 1122322110 001113
Q ss_pred HHHHHhhcc----cCCcEEEEcCCCCCccCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCC
Q 014172 218 PKVLESKLT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 292 (429)
Q Consensus 218 ~e~l~~~l~----~~~~~i~l~~p~NPtG~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~ 292 (429)
++.+++.+. ++..+|++...+...|.+ .+.+.+++|.++|++| |+++|.||+..+|...|.. .....+.-..|
T Consensus 201 ~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~-gillI~DEV~tGfGRtG~~-~a~~~~gv~PD 278 (459)
T PRK05965 201 VAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACREL-GILFVADEVITGFGRTGPL-FACEAEGVVPD 278 (459)
T ss_pred HHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhccCccCchh-hhHhhcCCCCC
Confidence 256677664 345566665556666764 5677899999999999 9999999999987433321 11111111112
Q ss_pred ceEEEeccChhccccc-ceeeEEEcCHHHHHHHHH-------HhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 014172 293 RTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNK-------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 364 (429)
Q Consensus 293 ~~i~~~S~SK~~~~~G-~R~G~v~~~~~~~~~l~~-------~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~ 364 (429)
+-+++|.++ .| ..+|.+++++++.+.+.. .....+++.++++.+++.+.|+. .++ +++.+..
T Consensus 279 ----iv~~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~---l~~--~~l~~~~ 348 (459)
T PRK05965 279 ----LMTVAKGLT-SGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRL---YHE--GGLLANG 348 (459)
T ss_pred ----eEEechhhc-cCCcceeEEEEcHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHH---HHh--ccHHHHH
Confidence 555899998 88 599999999999887753 12334566788888888888864 111 1233334
Q ss_pred HHHHHHHHHHhcc---CCCceeecCCceEEEEEecCCccCCcccCCCC-CCChHHHHHHHHHhCCeec
Q 014172 365 RERRDFLVKSFGE---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK-IENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 365 ~~~r~~l~~~L~~---l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~Ll~~~gV~v 428 (429)
++.-+++.+.|++ .+.+.-++..|-| +-+.+....... ..+.. ..-...+.+.++++ ||.+
T Consensus 349 ~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~-~gie~~~~~~~~-~~~~~~~~~~~~i~~~~~~~-Gll~ 413 (459)
T PRK05965 349 QKAGPRFAAGLDALRAHPLVGDVRGRGLL-GALELVADKATK-TPFDAALDPADRIFDRAYAN-GLVF 413 (459)
T ss_pred HHHHHHHHHHHHhhccCCCEEEEeecceE-EEEEEecccccc-CCCCchhHHHHHHHHHHHhC-CeEE
Confidence 4444555555544 3333333444544 445553210000 00000 00134677777765 8865
No 319
>PLN02590 probable tyrosine decarboxylase
Probab=99.54 E-value=5.3e-12 Score=128.82 Aligned_cols=276 Identities=12% Similarity=0.073 Sum_probs=182.4
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCC-----CCcEEEecChHHHHHHHHHHhcC--------
Q 014172 111 VLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYT-----PDQILVSNGAKQSILQAVLAVCS-------- 177 (429)
Q Consensus 111 ~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~-----~~~i~~t~G~~~al~~~l~~l~~-------- 177 (429)
..+.+.+..++......|...++..++.+.+.+|+.+.+|.+-. ...-++++|++++...++.+..+
T Consensus 145 ~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~ 224 (539)
T PLN02590 145 GFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGK 224 (539)
T ss_pred HHHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcc
Confidence 44555555555444455666778899999999999999996521 13457788999888776665322
Q ss_pred ---CCCEEEEcCCCCCChHHHHHHcCC---EEEEecCCCCCCCCCCHHHHHhhcccC------CcEEEEcCCCCCccCCC
Q 014172 178 ---PGDEVIIPAPFWVSYPEMARIADA---TPVILPTRISENFLLDPKVLESKLTEK------SRLLILCSPSNPTGSVY 245 (429)
Q Consensus 178 ---~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~e~l~~~l~~~------~~~i~l~~p~NPtG~~~ 245 (429)
+.-.|++++.+|.+...+++.+|+ +++.||++..+++.+|++.|+++|... +-+|+-+...-.||.+=
T Consensus 225 ~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiD 304 (539)
T PLN02590 225 TLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVD 304 (539)
T ss_pred cCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccC
Confidence 112566788899999999999998 588999876567889999999999642 34555566677899998
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCcccc-CCCCCCceEEEeccChhcccccceeeEEEcCH--HHHH
Q 014172 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS-LPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK--HFVA 322 (429)
Q Consensus 246 ~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~-~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~--~~~~ 322 (429)
| +++|+++|++| ++|+.+|.+|+.+..--. .... +.+.....=+...++|.+. ....+|.++..+ .+.+
T Consensus 305 p---l~~Ia~i~~~~-g~WlHVDaA~GG~al~~~---~~r~~~~Gie~ADSit~D~HK~l~-~p~~cg~llvr~~~~l~~ 376 (539)
T PLN02590 305 P---LVPLGNIAKKY-GIWLHVDAAYAGNACICP---EYRKFIDGIENADSFNMNAHKWLF-ANQTCSPLWVKDRYSLID 376 (539)
T ss_pred C---HHHHHHHHHHh-CCeEEEecchhhhhhcCh---hhHHHhcCCccCCEEEECchhhcC-cCcCEEEEEecCHHHHHH
Confidence 8 99999999999 999999999998642211 1111 1111122245667899986 667788877654 3333
Q ss_pred HHHHHhhcc----------------cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeec-
Q 014172 323 ACNKIQSQF----------------TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE- 385 (429)
Q Consensus 323 ~l~~~~~~~----------------~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~- 385 (429)
.+.....+. +...+.- ..++...+.....+.+.++++.++.-+..+++.+.+++.+++++..
T Consensus 377 a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr-~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~ 455 (539)
T PLN02590 377 ALKTNPEYLEFKVSKKDTVVNYKDWQISLSRR-FRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTT 455 (539)
T ss_pred HhhcCHHHhCCcccccccCCCccccCCCCCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Confidence 332111000 1111111 1222222221112467788888888889999999999988898865
Q ss_pred CCceEEEEEec
Q 014172 386 PQGAFYLFIDF 396 (429)
Q Consensus 386 p~~~~~~~~~l 396 (429)
|+-+. +.+++
T Consensus 456 ~~l~i-VcFr~ 465 (539)
T PLN02590 456 RYFSL-VCFRL 465 (539)
T ss_pred CceEE-EEEEe
Confidence 44444 44554
No 320
>PRK12403 putative aminotransferase; Provisional
Probab=99.53 E-value=1.1e-11 Score=125.75 Aligned_cols=247 Identities=13% Similarity=0.070 Sum_probs=151.7
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCC-CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPN-AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~-~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
.|+..||+..|. ..++. +|.+.+++.+++++..+ ++.. .+..+....+++.+.+..+. ..+.+++++++++++
T Consensus 52 dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~-~~~~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~SGseA~ 128 (460)
T PRK12403 52 DGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPY-YNMFFHTTHPAVIELSELLFSLLPG--HYSHAIYTNSGSEAN 128 (460)
T ss_pred CCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCC-eecccccCCHHHHHHHHHHHHhCCC--CcCEEEEeCCcHHHH
Confidence 578899987775 23443 78999999999876321 1111 23445666677777655431 236899999999999
Q ss_pred HHHHHHhc-------CCCCE-EEEcCCCCCChH-HHHHHcCCE-----------EEEecCCCC--CCCCC--------CH
Q 014172 169 LQAVLAVC-------SPGDE-VIIPAPFWVSYP-EMARIADAT-----------PVILPTRIS--ENFLL--------DP 218 (429)
Q Consensus 169 ~~~l~~l~-------~~gd~-Vlv~~p~y~~~~-~~~~~~g~~-----------~~~v~~~~~--~~~~~--------d~ 218 (429)
..+++... ++++. |+...-+|.+.. ......|.+ +..+|.... .++.. +.
T Consensus 129 e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 208 (460)
T PRK12403 129 EVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAA 208 (460)
T ss_pred HHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHH
Confidence 99988874 23333 445555666543 333333322 222321100 00011 13
Q ss_pred HHHHhhcc----cCCcEEEEcCCCCCccCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCc
Q 014172 219 KVLESKLT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 293 (429)
Q Consensus 219 e~l~~~l~----~~~~~i~l~~p~NPtG~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~ 293 (429)
+.+++.+. +++.+|++...+.-.|.+ .+.+.+++|.++|++| |+++|.||++..|-..|... ....+.-..
T Consensus 209 ~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~-g~lLI~DEV~tGfGRtG~~~-a~e~~gv~P-- 284 (460)
T PRK12403 209 LQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQY-DVLLCADEVIGGFGRTGEWF-AHEHFGFEP-- 284 (460)
T ss_pred HHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCchhh-hhhhcCCCC--
Confidence 45555542 234556665556656765 4677899999999999 99999999998763333211 111121111
Q ss_pred eEEEeccChhcccccc-eeeEEEcCHHHHHHHHHH----hhcccCCCchHHHHHHHHHHhc
Q 014172 294 TLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNKI----QSQFTSGASSISQKAGVAALGL 349 (429)
Q Consensus 294 ~i~~~S~SK~~~~~G~-R~G~v~~~~~~~~~l~~~----~~~~~~~~~~~~q~aa~~~l~~ 349 (429)
.|+ +|+|.++ .|. .+|.+++.+++.+.+... ....+++.++++.+++.+.|+.
T Consensus 285 Div--~~gK~lg-gG~~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~ 342 (460)
T PRK12403 285 DTL--SIAKGLT-SGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKA 342 (460)
T ss_pred CeE--EEccccc-ccccceEEEEECHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHH
Confidence 233 4999998 784 899999999988877531 1234556788888888888875
No 321
>PRK06062 hypothetical protein; Provisional
Probab=99.53 E-value=8.8e-12 Score=126.02 Aligned_cols=247 Identities=15% Similarity=0.149 Sum_probs=158.1
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 92 ~~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
..|+.+||+..|. ..++- +|++.+++.+.+.+.. .+.+ .-..+.+..+++.+.+.... ..+.|+++++++++.
T Consensus 50 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~-~~~~-~~~~~~~~~lae~L~~~~p~--~~~~v~f~~SGsEAv 125 (451)
T PRK06062 50 YEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLC-TVAP-AHANDARSEAARLIAERAPG--DLSKVFFTNGGADAN 125 (451)
T ss_pred CCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcC-CcCC-ccCCHHHHHHHHHHHHhCCC--CCCEEEEcCChHHHH
Confidence 3578899998886 33444 6899999999887632 2212 22345566677777654331 236899999999999
Q ss_pred HHHHHHhcC-CC-CEEEEcCCCCCChHHHHHHc-CCE-----------EEEecCCCCC--CCC--CC-------HHHHHh
Q 014172 169 LQAVLAVCS-PG-DEVIIPAPFWVSYPEMARIA-DAT-----------PVILPTRISE--NFL--LD-------PKVLES 223 (429)
Q Consensus 169 ~~~l~~l~~-~g-d~Vlv~~p~y~~~~~~~~~~-g~~-----------~~~v~~~~~~--~~~--~d-------~e~l~~ 223 (429)
..+++.... .| .+|+...-+|.+....+... |.. +..++..... .|. -| ++.+++
T Consensus 126 e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~ 205 (451)
T PRK06062 126 EHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLER 205 (451)
T ss_pred HHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHH
Confidence 999887532 23 67888888888765433322 211 1222211000 010 02 567777
Q ss_pred hcc----cCCcEEEEcCCCCCccCCC-CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEe
Q 014172 224 KLT----EKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVN 298 (429)
Q Consensus 224 ~l~----~~~~~i~l~~p~NPtG~~~-~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~ 298 (429)
.+. +++.+|++...+...|.+. +.+.+++|.++|++| |+++|.||++..|...|.. .....+.-..| +.
T Consensus 206 ~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~-g~lLI~DEV~tGfGRtG~~-~a~~~~gv~PD----i~ 279 (451)
T PRK06062 206 VIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRH-GIVLIADEVMAGFGRTGKW-FAIEHFGVVPD----LI 279 (451)
T ss_pred HHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHc-CCEEEeeccccCCCcCcHH-HHHHhcCCCCC----ee
Confidence 774 2345666654555567664 677899999999999 9999999999985333321 01111111122 55
Q ss_pred ccChhcccccc-eeeEEEcCHHHHHHHHHH--hhcccCCCchHHHHHHHHHHhc
Q 014172 299 GFSKAFAMTGW-RLGYIAGPKHFVAACNKI--QSQFTSGASSISQKAGVAALGL 349 (429)
Q Consensus 299 S~SK~~~~~G~-R~G~v~~~~~~~~~l~~~--~~~~~~~~~~~~q~aa~~~l~~ 349 (429)
+|+|.++ .|. .+|.+++.+++++.+... ....+++.++++.+++.+.|+.
T Consensus 280 t~gK~lg-gG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~ 332 (451)
T PRK06062 280 TFAKGVN-SGYVPLGGVAISEAIAATFADRPYPGGLTYSGHPLACAAAVATINA 332 (451)
T ss_pred eechhhh-cCCcCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 7999998 784 899999999998887532 2334566788888888888874
No 322
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.52 E-value=3.5e-12 Score=128.06 Aligned_cols=307 Identities=13% Similarity=0.058 Sum_probs=183.2
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..+|+..|. ..++- +|++.+++.+.+.+..+ +....-..+....+++.+.+... -..+.|+++++++++++
T Consensus 42 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGseAve 118 (429)
T PRK06173 42 DGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSH-IMFGGFTHEPAVELAQKLLEILP--PSLNKIFFADSGSVAVE 118 (429)
T ss_pred CCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCC-ccccccCCHHHHHHHHHHHhhCC--CCcCEEEEeCCchHHHH
Confidence 578899998775 33333 68999999998875321 11111123455566666655432 12368999999999999
Q ss_pred HHHHHhcC-------CC-CEEEEcCCCCCChHHHHH-HcCC-------------EEEEecCCCCCCCC-----CCHHHHH
Q 014172 170 QAVLAVCS-------PG-DEVIIPAPFWVSYPEMAR-IADA-------------TPVILPTRISENFL-----LDPKVLE 222 (429)
Q Consensus 170 ~~l~~l~~-------~g-d~Vlv~~p~y~~~~~~~~-~~g~-------------~~~~v~~~~~~~~~-----~d~e~l~ 222 (429)
.+++.... +| .+|+....+|.+....+. ..|. .+..+|... ..+. -+++.++
T Consensus 119 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~l~~l~ 197 (429)
T PRK06173 119 VAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPS-IKFGEEWNDEAIEPLQ 197 (429)
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCC-cccchhHHHHHHHHHH
Confidence 98887541 33 578888888887532221 1111 112222210 0000 1356677
Q ss_pred hhcc---cCCcEEEEcCC-CCCccCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEE
Q 014172 223 SKLT---EKSRLLILCSP-SNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTV 297 (429)
Q Consensus 223 ~~l~---~~~~~i~l~~p-~NPtG~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~ 297 (429)
+.+. +++.+|++... +.-.|.. .+++.+++|.++|++| |+++|.||++.++...|... ....+.-..| |+
T Consensus 198 ~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~-g~llI~DEv~tG~GrtG~~~-a~~~~gv~PD--iv- 272 (429)
T PRK06173 198 DLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQY-GVLLIFDEIATGFGRTGKLF-ALEHAGVVPD--IM- 272 (429)
T ss_pred HHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHc-CCeEEecchhcCCCcCCcch-HHHhcCCCCC--EE-
Confidence 7774 34556655542 6666765 6788899999999999 99999999997753333211 1111211112 33
Q ss_pred eccChhccccc-ceeeEEEcCHHHHHHHHHH-----hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHH
Q 014172 298 NGFSKAFAMTG-WRLGYIAGPKHFVAACNKI-----QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 371 (429)
Q Consensus 298 ~S~SK~~~~~G-~R~G~v~~~~~~~~~l~~~-----~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l 371 (429)
+|+|.++ .| ..++.+++++++.+.+... ....+++.++++.+++.+.|+. .++. ..++..+++-+++
T Consensus 273 -~~gK~l~-gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~---i~~~--~~~~~~~~~g~~l 345 (429)
T PRK06173 273 -CIGKALT-GGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRL---LLES--PWQQNIQRIEAQL 345 (429)
T ss_pred -Eeehhhh-CCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHH---HHhC--CHHHHHHHHHHHH
Confidence 4999997 77 4788899999998877531 1222445678888888888764 1211 2345555556666
Q ss_pred HHHhccC---CCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 372 VKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 372 ~~~L~~l---~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+.|+++ +.+.-++..| +.+-+.+... .+...+++.|+++ ||.+
T Consensus 346 ~~~L~~~~~~~~v~~vRg~G-l~~~iel~~~-----------~~~~~i~~~l~e~-Gi~v 392 (429)
T PRK06173 346 KQELAPAAEFDSVAEVRVLG-AIGVVEMKEP-----------VNMATLQPRFVEH-GIWV 392 (429)
T ss_pred HHHHHHhhcCCCeeeeeccc-eEEEEEeCCc-----------ccHHHHHHHHHHC-CeEE
Confidence 6666543 2232223444 4455666432 1356888888776 8875
No 323
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.52 E-value=1.6e-12 Score=116.58 Aligned_cols=173 Identities=16% Similarity=0.202 Sum_probs=145.0
Q ss_pred CHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCC
Q 014172 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISEN 213 (429)
Q Consensus 134 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~ 213 (429)
+.++.+.+++++ .-+.+-+|+|+.++-+.++.++|++||.|++...+|.+..-+++.+|+++..||-.....
T Consensus 63 I~~F~~dlaeFl--------g~D~~R~t~GARe~KfavMhal~~~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pe 134 (382)
T COG1103 63 IKDFLEDLAEFL--------GMDEVRVTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPE 134 (382)
T ss_pred HHHHHHHHHHHh--------CCceeeecccchhhHHHHHHHhccCCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCc
Confidence 356777788876 457889999999999999999999999999999999888889999999999999655556
Q ss_pred CCCCHHHHHhhccc-------CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCcccc
Q 014172 214 FLLDPKVLESKLTE-------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS 286 (429)
Q Consensus 214 ~~~d~e~l~~~l~~-------~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~ 286 (429)
+.+++|...+.|++ .+.+.++++|..-.|+..+ .+.++++|+++ ++.++...+|.- |..+.+...
T Consensus 135 y~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~D---akkva~ic~e~-gvPlllN~AYt~----Grmpvs~ke 206 (382)
T COG1103 135 YKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLAD---AKKVAKICREY-GVPLLLNCAYTV----GRMPVSGKE 206 (382)
T ss_pred eEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchh---hHHHHHHHHHc-CCceEeecceee----ccccccccc
Confidence 88899888777742 3667788999888999988 88999999999 999999999986 445555555
Q ss_pred CCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHH
Q 014172 287 LPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI 327 (429)
Q Consensus 287 ~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~ 327 (429)
+ +..++++|-+|+++ +.-.+|.+....++.+.+.+.
T Consensus 207 ~----g~DFiVgSGHKsmA-As~PiGvl~~~eE~ae~V~r~ 242 (382)
T COG1103 207 I----GADFIVGSGHKSMA-ASAPIGVLAMSEEWAEIVLRR 242 (382)
T ss_pred c----CCCEEEecCccchh-ccCCeeEEeehhHHHHHHHhh
Confidence 4 34599999999998 666899999999988877554
No 324
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.52 E-value=7.7e-12 Score=133.29 Aligned_cols=276 Identities=16% Similarity=0.136 Sum_probs=179.0
Q ss_pred CCCCCCC---CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcC--------CCCEEEEcCCCCCChH
Q 014172 125 FTRYTPN---AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS--------PGDEVIIPAPFWVSYP 193 (429)
Q Consensus 125 ~~~Y~~~---~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~--------~gd~Vlv~~p~y~~~~ 193 (429)
.+-|.|. +|..++...+..++.+..|.+ .--+..+|++++-...++++.. ..+.|+++.-.|....
T Consensus 516 ~hPyqPe~~sqG~lq~i~elq~~l~eltGmd---~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnP 592 (939)
T TIGR00461 516 IHPFQPSNQVEGYQELIAQLEKWLCSITGFD---AISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNP 592 (939)
T ss_pred cCCCCchHHhHHHHHHHHHHHHHHHHHHCCC---CcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCH
Confidence 4455543 677888899999999988854 2223444555544434444321 2357999999998888
Q ss_pred HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc---CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccC
Q 014172 194 EMARIADATPVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 270 (429)
Q Consensus 194 ~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~---~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Dea 270 (429)
..++..|.+++.++.+. ++.+|+++|++++++ ++++|++++|+| +|.+-+ .+++|+++|+++ |.++++|.+
T Consensus 593 asa~~~G~~Vv~V~~d~--~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~--~I~eI~~iah~~-G~~v~VDgA 666 (939)
T TIGR00461 593 ASAAMAGMQVVPVNCDQ--DGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEP--TIQHACDIVHSF-GGQVYLDGA 666 (939)
T ss_pred HHHHHCCCEEEEeccCC--CCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Cceecc--cHHHHHHHHHHc-CCEEEEEec
Confidence 88999999999999863 456999999999974 889999999999 787754 289999999999 899999999
Q ss_pred CcccccCCCCCCccccCCCCCCceEEEeccChhcc----cccceeeEEEcCHHHHHHHHHH---------------hhcc
Q 014172 271 YEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA----MTGWRLGYIAGPKHFVAACNKI---------------QSQF 331 (429)
Q Consensus 271 y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~----~~G~R~G~v~~~~~~~~~l~~~---------------~~~~ 331 (429)
+..-.. + ..-++..+-+++++|.+|+|+ ..|..+|++.+.+++...+-.. ....
T Consensus 667 q~~al~-~------l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s 739 (939)
T TIGR00461 667 NMNAQV-G------LTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVS 739 (939)
T ss_pred ChhhCC-C------CCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCcccccccc
Confidence 853110 0 111233466799999999775 3566789998887655443210 0000
Q ss_pred cCCCch-HHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC--CceEE--EEEecCCccCCcccC
Q 014172 332 TSGASS-ISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP--QGAFY--LFIDFSTYYGSEAEG 406 (429)
Q Consensus 332 ~~~~~~-~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p--~~~~~--~~~~l~~~~~~~~~~ 406 (429)
+.+.+. .....+..++.. .+.+.+++..+.--.+..++.++|++ +.++.-+ .+.+| +.++++.. ....|
T Consensus 740 ~~~~g~a~~~l~a~~yi~~--lG~~GL~~~a~~ailnAnYl~~rL~~--~~~~l~~~~~~~~~hEfv~~~~~~--~~~~g 813 (939)
T TIGR00461 740 AAPYGSASILPISWMYIKM--MGNEGLPKASVVAILNANYMATRLKD--HYPILFVGTLKHVAHECILDLRPL--KAKTG 813 (939)
T ss_pred ccccCcHHHHHHHHHHHHH--HCHHHHHHHHHHHHHHHHHHHHHhhc--cCcccccCCCCceeEEEEEeccch--hhhcC
Confidence 101111 111222223222 14677888888888899999999987 3444332 22222 22455421 00001
Q ss_pred CCCCCChHHHHHHHHHhCCee
Q 014172 407 FGKIENSESLCRYLLDKAQVL 427 (429)
Q Consensus 407 ~~~~~~~~~~~~~Ll~~~gV~ 427 (429)
.+..+++++|++. |+.
T Consensus 814 ----~~~~dIakrL~d~-G~h 829 (939)
T TIGR00461 814 ----IEAIDVAKRLQDY-GFH 829 (939)
T ss_pred ----CCHHHHHHHHHhC-Cee
Confidence 3688999999987 653
No 325
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.52 E-value=1.1e-11 Score=125.61 Aligned_cols=315 Identities=14% Similarity=0.122 Sum_probs=181.8
Q ss_pred cCCCeEEcCCC-CCCCC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHH
Q 014172 93 AGVSVIRLAAG-EPDFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQ 170 (429)
Q Consensus 93 ~g~~~i~L~~g-~~~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~ 170 (429)
.|+..||+..+ ...++ .+|++.+++.+.+.+. .+....-..+....+++.+.+..+. ..+.+++++++++++..
T Consensus 70 dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~--~~~~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~sGseAve~ 145 (459)
T PRK06082 70 DGKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKL--PFSPRRFTNETAIECAEKLTEIAGG--ELNRVLFAPGGTSAIGM 145 (459)
T ss_pred CCCEEEEcccHhhcccCCCCHHHHHHHHHHHHhC--CCccCccCCHHHHHHHHHHHHhCCC--CCCEEEECCCcHHHHHH
Confidence 57889998733 22344 3789999999998752 2222212345666777777665431 23689999999999998
Q ss_pred HHHHhcC-C-CCEEEEcCCCCCChHH-HHHHcCCE------------EEEecCCCCC--CCC-C------CHHHHHhhcc
Q 014172 171 AVLAVCS-P-GDEVIIPAPFWVSYPE-MARIADAT------------PVILPTRISE--NFL-L------DPKVLESKLT 226 (429)
Q Consensus 171 ~l~~l~~-~-gd~Vlv~~p~y~~~~~-~~~~~g~~------------~~~v~~~~~~--~~~-~------d~e~l~~~l~ 226 (429)
+++.... . ..+|+...-+|.+... .....|.. +..+|..... .+. . +++.+++.+.
T Consensus 146 AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 225 (459)
T PRK06082 146 ALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIE 225 (459)
T ss_pred HHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHh
Confidence 8876532 2 3678888887777543 33233221 1222211000 010 0 1345676664
Q ss_pred --cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhc
Q 014172 227 --EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF 304 (429)
Q Consensus 227 --~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 304 (429)
.+..+|++...++..+.+.+.+.+++|.++|++| |+++|.||++.+|...|.. .....+.-..| |+ +|+|.+
T Consensus 226 ~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~-g~llI~DEV~tG~GRtG~~-fa~e~~gv~PD--iv--~~gKgl 299 (459)
T PRK06082 226 KEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKH-NVLLIIDEIPNGMGRTGEW-FTHQAYGIEPD--IL--CIGKGL 299 (459)
T ss_pred cCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhCCCccchh-hHhHhhCCCCC--EE--Eecccc
Confidence 2455555554555545577888999999999999 9999999999876333321 11111111112 33 489999
Q ss_pred cccc-ceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc----CC
Q 014172 305 AMTG-WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE----LE 379 (429)
Q Consensus 305 ~~~G-~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----l~ 379 (429)
+ .| ..+|.+++.+++...........+++.++++.+++.+.|+. .++ +++.+..+++-+++.+.|++ .+
T Consensus 300 ~-gG~~P~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~---l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~ 373 (459)
T PRK06082 300 G-GGLVPIAAMITKDKYNTAAQISLGHYTHEKSPLGCAAALATIEV---IEQ--EGLLEKVKADSQFMRERLLEMKAKYP 373 (459)
T ss_pred c-CCCCcceEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHH---HHh--cCHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 8 67 58999999988764432111124666788888888888874 111 13444455555555555544 33
Q ss_pred CceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 380 GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 380 g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+.-++..|.| +-+.+....... . ........+...++++ ||.+
T Consensus 374 ~i~~vrG~Gl~-~~ve~~~~~~~~-~--~~~~~~~~~~~~~~~~-Gvl~ 417 (459)
T PRK06082 374 LIGDVRGIGLL-WGVELVTDRHTK-E--RAYDEAEAVLYRCLNN-GLSF 417 (459)
T ss_pred Ceeeeeeccce-eEEEEccCcccc-C--ccHHHHHHHHHHHHhC-CCEE
Confidence 23334455544 455553210000 0 0000134677777765 8764
No 326
>PRK06105 aminotransferase; Provisional
Probab=99.52 E-value=8.8e-12 Score=126.36 Aligned_cols=320 Identities=13% Similarity=0.063 Sum_probs=183.5
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 92 ~~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
..|+..||+..|. ..++- +|.+.+++.+++.+............+.+..+++.+.+..+. .-+.|++++++++++
T Consensus 45 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~SGseAv 122 (460)
T PRK06105 45 DAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPV--PMSKVFFTNSGSEAN 122 (460)
T ss_pred CCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCC--CCCEEEEeCCcHHHH
Confidence 3578899998885 33443 789999999998763211111112345556677777655431 236899999999999
Q ss_pred HHHHHHhc------C-CC-CEEEEcCCCCCChHHHHHH-cCC------------EEEEecCCCCCCCC-----------C
Q 014172 169 LQAVLAVC------S-PG-DEVIIPAPFWVSYPEMARI-ADA------------TPVILPTRISENFL-----------L 216 (429)
Q Consensus 169 ~~~l~~l~------~-~g-d~Vlv~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~~~-----------~ 216 (429)
..+++... . +| .+|+...-+|.+....+.. .|. .+..++......+. .
T Consensus 123 e~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 202 (460)
T PRK06105 123 DTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATR 202 (460)
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHH
Confidence 99988742 1 23 5788888877765433221 111 11222221100000 0
Q ss_pred CHHHHHhhcc----cCCcEEEEcCCCCCccCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCC
Q 014172 217 DPKVLESKLT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 291 (429)
Q Consensus 217 d~e~l~~~l~----~~~~~i~l~~p~NPtG~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~ 291 (429)
..+++++.+. ++..+|++...+.-.|.. .+.+.+++|.++|++| |+++|.||++..|-..|.. ..+..+.-..
T Consensus 203 ~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~-~~llI~DEv~tG~GRtG~~-f~~~~~~v~P 280 (460)
T PRK06105 203 LANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKY-DILLVADEVICGFGRTGNM-FGCETFGIKP 280 (460)
T ss_pred HHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCeEEEeccccCCCcCchh-hhHHhcCCCC
Confidence 1355666663 245566665556556765 5788899999999999 9999999999776333321 1111111111
Q ss_pred CceEEEeccChhccccc-ceeeEEEcCHHHHHHHHHHh-------hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHH
Q 014172 292 ERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQ-------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (429)
Q Consensus 292 ~~~i~~~S~SK~~~~~G-~R~G~v~~~~~~~~~l~~~~-------~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~ 363 (429)
| +.+|+|.++ .| ..+|.+++++++.+.+.... ...+++.++++.+++.+.|+. .++ +++.+.
T Consensus 281 D----i~~~gK~lg-gG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~---i~~--~~l~~~ 350 (460)
T PRK06105 281 D----ILVMSKQLS-SSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAI---IEE--RDLVGN 350 (460)
T ss_pred C----eeeeecccc-cCcccceEEEEcHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHH---HHh--ccHHHH
Confidence 2 557999998 66 58999999999988775321 234556788888888888764 111 123444
Q ss_pred HHHHHHHHHHHhcc---CCCceeecCCceEEEEEecCCccCCcccCCCCCC-ChHHHHHHHHHhCCeec
Q 014172 364 FRERRDFLVKSFGE---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE-NSESLCRYLLDKAQVLL 428 (429)
Q Consensus 364 ~~~~r~~l~~~L~~---l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~Ll~~~gV~v 428 (429)
.++.-+++.+.|++ .+.+.-+...| +++-+.+...... ...+.... -...++..++++ ||.+
T Consensus 351 v~~~g~~l~~~L~~l~~~~~v~~vrG~G-l~~gie~~~~~~~-~~~~~~~~~~a~~i~~~~~~~-Gvl~ 416 (460)
T PRK06105 351 AAERGARLQARLRALADHPLVGEVRGVG-LIAAVELVADKAT-KTPFEPPGKVGARANAAAHEH-GVIS 416 (460)
T ss_pred HHHHHHHHHHHHHHhhcCCCeEEEEecc-eEEEEEEecCccc-CCCCCchhHHHHHHHHHHHHC-CeEE
Confidence 44444555555544 33233334454 4344555211000 00000000 124677777665 8875
No 327
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.52 E-value=1.4e-11 Score=124.50 Aligned_cols=313 Identities=17% Similarity=0.159 Sum_probs=179.3
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..||+..|. ..++- +|.+.+++.+.+.+..+ ........+....+++.+.+..+ ...+.++++++++++++
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~-~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGsEA~e 127 (457)
T PRK05639 51 DGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQH-SMIGYTHSERAIRVAEKLAEISP--IENPKVLFGLSGSDAVD 127 (457)
T ss_pred CCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccc-cccCccCCHHHHHHHHHHHhhCC--CCcCEEEEeCchHHHHH
Confidence 578899998886 33444 78999999998875321 11111113444556666655433 12368999999999999
Q ss_pred HHHHHhc--CCCCEEEEcCCCCCChHHHHHH-cCC-------------EEEEecCCCCCC--CC----CCH--------H
Q 014172 170 QAVLAVC--SPGDEVIIPAPFWVSYPEMARI-ADA-------------TPVILPTRISEN--FL----LDP--------K 219 (429)
Q Consensus 170 ~~l~~l~--~~gd~Vlv~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~~~--~~----~d~--------e 219 (429)
.+++... .....|+....+|.+....+.. .|. .++.+|.+.... +. -+. +
T Consensus 128 ~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (457)
T PRK05639 128 MAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLD 207 (457)
T ss_pred HHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHH
Confidence 9988753 2236788888888875543322 221 133444321100 00 022 2
Q ss_pred HHHhhc------ccCCcEEEEcCCCCCccC-CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCC
Q 014172 220 VLESKL------TEKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 292 (429)
Q Consensus 220 ~l~~~l------~~~~~~i~l~~p~NPtG~-~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~ 292 (429)
.+++.+ ..++.+|++...+.-.|. ..+.+.+++|.++|++| |+++|.||++.+|...|.. .....+.-..|
T Consensus 208 ~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~-g~llI~DEv~tG~GrtG~~-~a~~~~gv~PD 285 (457)
T PRK05639 208 YLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEH-GILLVMDEVQTGIGRTGKW-FASEWFEVKPD 285 (457)
T ss_pred HHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhccCcCchH-HHHHhcCCCCC
Confidence 344443 234556666545555676 44677899999999999 9999999999875333321 11111111112
Q ss_pred ceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHH
Q 014172 293 RTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLV 372 (429)
Q Consensus 293 ~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~ 372 (429)
|++ |+|.++ .|..+|.+++++++++.. ......+++.++++.+++.+.|+. .++ ++..+..+++-+++.
T Consensus 286 --iv~--~gK~l~-gG~pi~av~~~~~i~~~~-~~~~~~T~~g~p~~~aaa~a~l~~---l~~--~~l~~~~~~~g~~l~ 354 (457)
T PRK05639 286 --LII--FGKGVA-SGMGLSGVIGRKELMDLT-SGSALLTPAANPVISAAAEATLEI---IEE--ENLLKNALKVGEFIK 354 (457)
T ss_pred --EEE--echhhc-CCCcceeEEehHHHHhhc-CCCcccCCCcCHHHHHHHHHHHHH---HHH--ccHHHHHHHHHHHHH
Confidence 333 899998 789999999999998732 211224556777777888887764 111 123333334445555
Q ss_pred HHhcc----CCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 373 KSFGE----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 373 ~~L~~----l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.|++ .+-+.-++..|-| +-+.+-.... .........+.+.|+++ ||.+
T Consensus 355 ~~L~~l~~~~~~~~~VrG~Gl~-~gve~~~~~~-----~~~~~~~~~~~~~~~~~-Gv~~ 407 (457)
T PRK05639 355 KRLLEMKESFEVIGDVRGKGLM-IGVEIVKENG-----KPDPELTGKICWRAFEL-GLIL 407 (457)
T ss_pred HHHHHHHHhCCCEEeeccceeE-EEEEEecCCC-----CCCHHHHHHHHHHHHhC-CeEE
Confidence 55544 3222223445544 4444421100 00001245677777776 8875
No 328
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.51 E-value=8.5e-12 Score=125.09 Aligned_cols=309 Identities=15% Similarity=0.083 Sum_probs=181.9
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 92 ~~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
..|+..||+..|. ..++- +|++.+++.+.+++..+.... .-..+....+++.+.+..+. ..+.+++++++++++
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~-~~~~~~~~~lae~L~~~~p~--~~~~v~f~~SGseA~ 113 (422)
T PRK05630 37 EDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFG-GLTHEPAIKLTRKLLNLTDN--GLDHVFYSDSGSVSV 113 (422)
T ss_pred CCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccC-CcCCHHHHHHHHHHHhhCCC--CcCEEEEeCCcHHHH
Confidence 3578899998886 33444 789999999998763211100 01234455566666554321 236899999999999
Q ss_pred HHHHHHhcC-------CC-CEEEEcCCCCCChHHHHHH-cCC-------------EEEEecCCCCCCCCC-C----HHHH
Q 014172 169 LQAVLAVCS-------PG-DEVIIPAPFWVSYPEMARI-ADA-------------TPVILPTRISENFLL-D----PKVL 221 (429)
Q Consensus 169 ~~~l~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~~~~~~-d----~e~l 221 (429)
+.+++.... ++ .+|+....+|.+....+.. .+. ....+|......... + .+.+
T Consensus 114 e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 193 (422)
T PRK05630 114 EVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSL 193 (422)
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHHHH
Confidence 988887431 23 5788888888875433322 121 122333221110000 1 2345
Q ss_pred HhhcccCCcEEEEcC-CCCCccCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEec
Q 014172 222 ESKLTEKSRLLILCS-PSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNG 299 (429)
Q Consensus 222 ~~~l~~~~~~i~l~~-p~NPtG~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S 299 (429)
++.+.+++.+|++.- .+.-.|.. .+.+.+++|.++|++| |+++|.||++.++...|.. .......-..| +-+
T Consensus 194 ~~~~~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~-g~llI~DEv~tG~GrtG~~-~a~~~~gv~PD----i~t 267 (422)
T PRK05630 194 ELLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKH-DILLIADEIATGFGRTGEL-FATLAAGVTPD----IMC 267 (422)
T ss_pred HHHHhhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHc-CCEEEEecceeCCCcCchh-hHHHhcCCCCC----eee
Confidence 555555666666654 26666764 5677899999999999 9999999999876333321 11111111111 337
Q ss_pred cChhccccc-ceeeEEEcCHHHHHHHHHH------hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHH
Q 014172 300 FSKAFAMTG-WRLGYIAGPKHFVAACNKI------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLV 372 (429)
Q Consensus 300 ~SK~~~~~G-~R~G~v~~~~~~~~~l~~~------~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~ 372 (429)
|+|.++ .| ..+|++++++++.+.+... ....+++.++.+..++.++|+. .++. ...+..+++-+++.
T Consensus 268 ~gK~l~-gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~---l~~~--~~~~~~~~~g~~l~ 341 (422)
T PRK05630 268 VGKALT-GGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEI---IETG--MWRKQVKRIEAELI 341 (422)
T ss_pred eechhh-cCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHH---HHhC--cHHHHHHHHHHHHH
Confidence 899997 67 5899999999998887531 1234556778888888887765 1110 12233334444444
Q ss_pred HHhcc---CCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 373 KSFGE---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 373 ~~L~~---l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.|+. .+.+.-++..| +++-+.+... .+...+.+.|+++ ||.+
T Consensus 342 ~~L~~l~~~~~v~~vRg~G-l~~~ie~~~~-----------~~~~~~~~~~~~~-Gl~~ 387 (422)
T PRK05630 342 AGLSPLAHLPGVADVRVLG-AIGVVEMEQP-----------VDMEEATQAAVDH-GVWL 387 (422)
T ss_pred HHHHHhhcCCCeeeeeccc-cEEEEEECCc-----------ccHHHHHHHHHHC-CeEE
Confidence 44443 33343334444 4466666421 1356788888776 8765
No 329
>PRK06917 hypothetical protein; Provisional
Probab=99.51 E-value=2e-11 Score=123.24 Aligned_cols=319 Identities=15% Similarity=0.114 Sum_probs=183.6
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 92 ~~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
..|+..||+..|. ..++- +|.+.+++.+.+.+..+.+.. .-..+....+++.+.+... -..+.+++++++++++
T Consensus 28 ~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEAv 104 (447)
T PRK06917 28 QNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRS-QFTSEPAEKLAKKLSDLSP--GDLNWSFFVNSGSEAN 104 (447)
T ss_pred CCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCcccc-ccCCHHHHHHHHHHHHhCC--CCCCEEEEeCChHHHH
Confidence 3578899998875 33444 799999999998764222211 1123556667777765543 1235899999999999
Q ss_pred HHHHHHhc-------CCC-CEEEEcCCCCCChHHHHHH-cCC------------EEEEecCCCCCC--CC--------CC
Q 014172 169 LQAVLAVC-------SPG-DEVIIPAPFWVSYPEMARI-ADA------------TPVILPTRISEN--FL--------LD 217 (429)
Q Consensus 169 ~~~l~~l~-------~~g-d~Vlv~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~--~~--------~d 217 (429)
+.+++... .+| .+|+...-+|.+....+.. .|. .+..++...... +. -+
T Consensus 105 e~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 184 (447)
T PRK06917 105 ETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLAC 184 (447)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHH
Confidence 99988762 133 6788888888876543332 221 111222111000 00 02
Q ss_pred HHHHHhhcc----cCCcEEEEcCCC-CCccC-CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCC
Q 014172 218 PKVLESKLT----EKSRLLILCSPS-NPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 291 (429)
Q Consensus 218 ~e~l~~~l~----~~~~~i~l~~p~-NPtG~-~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~ 291 (429)
++.+++.+. +++.+|++.... +-.|. ..+.+.+++|.++|++| |+++|.||++.+|...|... ....+.-..
T Consensus 185 ~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~-g~llI~DEv~tGfGRtG~~~-a~~~~gv~P 262 (447)
T PRK06917 185 ATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHY-DILFIADEVMTGLGRTGAMF-AMEHWGVEP 262 (447)
T ss_pred HHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHc-CCEEEEechhhCcCcccchh-hHHhcCCCC
Confidence 456666664 235555554333 33444 55788899999999999 99999999998753233211 111111111
Q ss_pred CceEEEeccChhcccccc-eeeEEEcCHHHHHHHHHHh----hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 014172 292 ERTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNKIQ----SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRE 366 (429)
Q Consensus 292 ~~~i~~~S~SK~~~~~G~-R~G~v~~~~~~~~~l~~~~----~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~ 366 (429)
| +.+|+|.++ .|. .+|.+++.+++.+.+.... ...+++.++++.+++.+.|+. .++ +++.+..++
T Consensus 263 D----i~~~gK~l~-~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~---l~~--~~l~~~~~~ 332 (447)
T PRK06917 263 D----IMTLGKGLG-AGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEY---MEK--HNLPEKAAE 332 (447)
T ss_pred C----EEEeeehhc-cCCcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHH---HHH--CCHHHHHHH
Confidence 2 456899998 785 8999999999988775321 223556788888888888874 111 123344444
Q ss_pred HHHHHHHHhcc----CCCceeecCCceEEEEEecCCccCCcccCCCC-CCChHHHHHHHHHhCCeec
Q 014172 367 RRDFLVKSFGE----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK-IENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 367 ~r~~l~~~L~~----l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~Ll~~~gV~v 428 (429)
+-+++.+.|++ .+-+.-++..|-| +.+.+-.... ..+.+.. ......++..|+++ ||.+
T Consensus 333 ~g~~l~~~L~~l~~~~~~i~~vrG~Gl~-~~ie~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-Gvl~ 396 (447)
T PRK06917 333 KGEYLIKGLQKVQQQSTIIGDVRGKGLL-IGVEFVADKK-TKQPFSKSQAVASELISVAAKN-GLLL 396 (447)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeecceE-EEEEEeccCC-cCCCCcchhHHHHHHHHHHHhC-CcEE
Confidence 44445454444 3323333455544 4444421000 0000000 01145677777776 8865
No 330
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.51 E-value=1.4e-11 Score=124.24 Aligned_cols=312 Identities=15% Similarity=0.114 Sum_probs=183.8
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCC-CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPN-AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~-~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
.|+..||+..|. ..++. +|.+.+++.+.+++.. |.+. ....+....+++.+.+.... ..+.|++++++++++
T Consensus 44 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~--~~~~~~~~~~~~~~la~~l~~~~p~--~~~~v~f~~sGseA~ 119 (442)
T PRK13360 44 DGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELD--YAPAFQMGHPKAFELANRIAEIAPG--GLNHVFFTNSGSESV 119 (442)
T ss_pred CCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCC--CcccCCcCCHHHHHHHHHHHHhCCC--CCCEEEEeCCcHHHH
Confidence 577899998775 23444 7899999999887522 2111 12235555677777654321 235899999999999
Q ss_pred HHHHHHhcC-------CC-CEEEEcCCCCCChHHHHH-HcC------------CEEEEecCCC--C-CCCCC--------
Q 014172 169 LQAVLAVCS-------PG-DEVIIPAPFWVSYPEMAR-IAD------------ATPVILPTRI--S-ENFLL-------- 216 (429)
Q Consensus 169 ~~~l~~l~~-------~g-d~Vlv~~p~y~~~~~~~~-~~g------------~~~~~v~~~~--~-~~~~~-------- 216 (429)
+.+++.... +| .+|+...-+|.+....+. ..| ..+..+|... . ..+..
T Consensus 120 e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 199 (442)
T PRK13360 120 DTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAE 199 (442)
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHH
Confidence 998886431 22 579988888887643222 111 1122233221 0 00111
Q ss_pred CHHHHHhhcc----cCCcEEEEcCCCCCccCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCC
Q 014172 217 DPKVLESKLT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 291 (429)
Q Consensus 217 d~e~l~~~l~----~~~~~i~l~~p~NPtG~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~ 291 (429)
..+.+++.+. ++..+|++...+...|.. .+.+.+++|.++|++| |+++|.||++..+-..|.. .....+.-..
T Consensus 200 ~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~-g~llI~DEv~tG~GrtG~~-~a~~~~gv~P 277 (442)
T PRK13360 200 LADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKH-GILLIFDEVITGFGRLGAP-FAAQYFGVTP 277 (442)
T ss_pred HHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCCCccc-hhhhhcCCCC
Confidence 1456777664 234455555556666765 4677899999999999 9999999999765332321 1111111111
Q ss_pred CceEEEeccChhccccc-ceeeEEEcCHHHHHHHHHH-------hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHH
Q 014172 292 ERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (429)
Q Consensus 292 ~~~i~~~S~SK~~~~~G-~R~G~v~~~~~~~~~l~~~-------~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~ 363 (429)
| +.+|+|.++ .| ..+|.+++++++.+.+... ....+++.+.++.+++.+.|+. .++ +.+.+.
T Consensus 278 D----ivt~gK~l~-gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~---l~~--~~l~~~ 347 (442)
T PRK13360 278 D----LLTCAKGLT-NGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDL---YER--EGLLTR 347 (442)
T ss_pred c----eeeeeeccc-cCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHH---HHh--CCHHHH
Confidence 2 447999998 56 7899999999998876531 1234556788888888888874 221 134445
Q ss_pred HHHHHHHHHHHhccC---CCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 364 FRERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 364 ~~~~r~~l~~~L~~l---~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+++-+++.+.|+++ +.+.-++..|-+ +-+.+..... .......+++.+|+++ ||.+
T Consensus 348 ~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~-~~~~l~~~~~------~~~~~~~~~~~~l~~~-Gvl~ 407 (442)
T PRK13360 348 AARLAPYWEDALHSLRDAPHVIDIRNLGLV-GAVELAPRDG------KPGKRAYEVFLKCFEK-GLMI 407 (442)
T ss_pred HHHHHHHHHHHHHHhhcCCCeeeeeccceE-EEEEEecCCC------CcchhHHHHHHHHHHC-CcEE
Confidence 555555666666544 222222333333 3344421100 0001345788888776 8875
No 331
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.50 E-value=2.3e-12 Score=133.92 Aligned_cols=144 Identities=14% Similarity=0.183 Sum_probs=110.1
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCC----CCC-----HHHHHhh
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENF----LLD-----PKVLESK 224 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~----~~d-----~e~l~~~ 224 (429)
.....++++|+|.++..++++++.+||.||+++.+|-+....+.+.|+++++++... +.+ .++ ++.|+++
T Consensus 210 Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~r-n~~Gi~g~I~~~~~~~e~i~~~ 288 (714)
T PRK15400 210 ADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTR-NAYGILGGIPQSEFQHATIAKR 288 (714)
T ss_pred CCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccc-cccCCccCCCccccCHHHHHHH
Confidence 446789999999999999999999999999999999999999999999999997543 222 234 8999998
Q ss_pred ccc--CCc---EEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCccc-ccCCCCC-CccccC-CCCCCceEE
Q 014172 225 LTE--KSR---LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI-IYAPATH-TSFASL-PGMWERTLT 296 (429)
Q Consensus 225 l~~--~~~---~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~-~~~~~~~-~~~~~~-~~~~~~~i~ 296 (429)
+.. +.+ .++|++|+. -|.+++ +++|++.|+.+ + |++||||+.. .|.+.-. .+.... ....+.+++
T Consensus 289 i~~~p~ak~p~~~vit~pTY-dG~~yd---~~~I~~~~~~~-~--ilvDEAwgah~~F~p~~~~~sam~~ga~~~~~i~v 361 (714)
T PRK15400 289 VKETPNATWPVHAVITNSTY-DGLLYN---TDFIKKTLDVK-S--IHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYE 361 (714)
T ss_pred HHhCccccCccEEEEECCCC-ccEecC---HHHHHHHhCCC-C--EEEEccchhhhccCcccCCcChhhcCCCCCCceEE
Confidence 864 223 788999965 899999 88899999888 7 5889999853 3443211 111111 111255699
Q ss_pred EeccChhcc
Q 014172 297 VNGFSKAFA 305 (429)
Q Consensus 297 ~~S~SK~~~ 305 (429)
+.|.+|.++
T Consensus 362 tQStHKtL~ 370 (714)
T PRK15400 362 TQSTHKLLA 370 (714)
T ss_pred EEchhhccc
Confidence 999999984
No 332
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.50 E-value=2.4e-11 Score=122.83 Aligned_cols=314 Identities=13% Similarity=0.056 Sum_probs=185.6
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 92 ~~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
..|+..||+..|. ..++- +|++.+++.+.+.+..+.. ...-..+....+++.+.+..+. ..+.+++++++++++
T Consensus 51 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~-~~~~~~~~~~~lAe~L~~~~p~--~~~~v~f~~sGseAv 127 (453)
T PRK06943 51 RDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAM-LAGCTHEPAIELAERLAALTGG--TLGHAFFASDGASAV 127 (453)
T ss_pred CCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCcc-ccccCCHHHHHHHHHHHHhCCC--CCCEEEEeCCCHHHH
Confidence 3578899998885 33444 7899999999887532111 1111234556677777654431 225899999999999
Q ss_pred HHHHHHhc-------CCC-CEEEEcCCCCCChHHHHHH-cCC------------EEEEecCCCCCC--CC--------CC
Q 014172 169 LQAVLAVC-------SPG-DEVIIPAPFWVSYPEMARI-ADA------------TPVILPTRISEN--FL--------LD 217 (429)
Q Consensus 169 ~~~l~~l~-------~~g-d~Vlv~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~--~~--------~d 217 (429)
..+++... .+| .+|+...-+|.+....+.. .|- .+..++.....+ +. -+
T Consensus 128 e~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 207 (453)
T PRK06943 128 EIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARA 207 (453)
T ss_pred HHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHH
Confidence 99988752 123 6788888888875432221 111 122233221100 00 12
Q ss_pred HHHHHhhcc---cCCcEEEEcC-CCCCccC-CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCC
Q 014172 218 PKVLESKLT---EKSRLLILCS-PSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 292 (429)
Q Consensus 218 ~e~l~~~l~---~~~~~i~l~~-p~NPtG~-~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~ 292 (429)
++.+++.+. +++.+|++.- .+.-.|. +.+.+.+++|.++|++| |+++|.||++.+|-..|.. .....+.-..|
T Consensus 208 ~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~-gillI~DEV~TG~GRtG~~-fa~~~~gv~PD 285 (453)
T PRK06943 208 LADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRY-GVHLIADEIAVGCGRTGTF-FACEQAGVWPD 285 (453)
T ss_pred HHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHc-CCEEEeechhhCCCCCcch-hHHHhCCCCCC
Confidence 466777664 3455666654 2555676 46788899999999999 9999999999886433321 11111111112
Q ss_pred ceEEEeccChhccccc-ceeeEEEcCHHHHHHHHHH------hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 014172 293 RTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFR 365 (429)
Q Consensus 293 ~~i~~~S~SK~~~~~G-~R~G~v~~~~~~~~~l~~~------~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~ 365 (429)
+-+++|.++ .| ..+|.+++++++.+.+..- ....+++.++++.+++.+.|+. .++ +++.+..+
T Consensus 286 ----ivt~gKgl~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~---i~~--~~l~~~~~ 355 (453)
T PRK06943 286 ----FLCLSKGIS-GGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDL---FAE--DDVLARNA 355 (453)
T ss_pred ----eEeeehhhc-cCcccceEEEEcHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHH---HHh--cCHHHHHH
Confidence 455799998 88 5999999999998877531 1334556788888888888875 111 12233333
Q ss_pred HHHHHHHHHhcc---CCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 366 ERRDFLVKSFGE---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 366 ~~r~~l~~~L~~---l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.-+++.+.|++ .+++.-++..|-| +-+.+...... .......+..+++++ ||.+
T Consensus 356 ~~G~~l~~~L~~l~~~~~v~~vrG~Gl~-~gvel~~~~~~------~~~~~~~i~~~~~~~-Gll~ 413 (453)
T PRK06943 356 RKSARLRAALAPLAAHPQVRHLRQRGTI-FAFDVALDGDA------ARTFSRRFFEAALER-ELLL 413 (453)
T ss_pred HHHHHHHHHHHHHhcCCCEEeEeccccE-EEEEEccCCCc------chHHHHHHHHHHHHC-CcEE
Confidence 334444444433 3455544455544 45555310000 000135677777766 8765
No 333
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.50 E-value=2.3e-11 Score=122.85 Aligned_cols=312 Identities=17% Similarity=0.144 Sum_probs=185.0
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCC-CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPN-AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~-~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
.|+..||+..|. ..++. +|.+.+++.+.+.+.. |.+. .-..+....+++.+.+..+. ..+.|++++++++++
T Consensus 47 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~--~~~~~~~~~~~~~~la~~L~~~~p~--~~~~v~f~~sGseAv 122 (445)
T PRK09221 47 DGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLD--YAPAFQMGHPLAFELAERLAELAPG--GLDHVFFTNSGSESV 122 (445)
T ss_pred CCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCCC--CCCEEEEeCCcHHHH
Confidence 578899998885 33443 7889999999887521 1111 11234455577777654431 236899999999999
Q ss_pred HHHHHHhcC-------CC-CEEEEcCCCCCChHHHHHHc-C------------CEEEEecCCC---CCCCCC--------
Q 014172 169 LQAVLAVCS-------PG-DEVIIPAPFWVSYPEMARIA-D------------ATPVILPTRI---SENFLL-------- 216 (429)
Q Consensus 169 ~~~l~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~-g------------~~~~~v~~~~---~~~~~~-------- 216 (429)
+.+++.... ++ .+|+....+|.+....+... | ..+..+|... ...+..
T Consensus 123 e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (445)
T PRK09221 123 DTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAE 202 (445)
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHH
Confidence 998886431 12 57888888888764332211 1 0122233211 000100
Q ss_pred CHHHHHhhcc----cCCcEEEEcCCCCCccCCC-CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCC
Q 014172 217 DPKVLESKLT----EKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 291 (429)
Q Consensus 217 d~e~l~~~l~----~~~~~i~l~~p~NPtG~~~-~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~ 291 (429)
..+.+++.+. +++.+|++...+...|... +.+.+++|.++|++| |+++|.||++..|...|.. .....+.-..
T Consensus 203 ~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~-g~llI~DEV~tG~GRtG~~-~~~~~~gv~P 280 (445)
T PRK09221 203 LADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKH-GILLIFDEVITGFGRLGAA-FAAERFGVTP 280 (445)
T ss_pred HHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEeehhhCCCcCchh-hHHHhcCCCC
Confidence 1346666664 2455666655566678754 566799999999999 9999999999865332321 1111111111
Q ss_pred CceEEEeccChhccccc-ceeeEEEcCHHHHHHHHHH-------hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHH
Q 014172 292 ERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (429)
Q Consensus 292 ~~~i~~~S~SK~~~~~G-~R~G~v~~~~~~~~~l~~~-------~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~ 363 (429)
| +.+|+|.++ .| ..+|.+++++++++.+... ....+++.++++..++.+.|+. .++ +.+.+.
T Consensus 281 D----i~~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~---i~~--~~l~~~ 350 (445)
T PRK09221 281 D----IITFAKGLT-NGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDI---YRE--EDLFER 350 (445)
T ss_pred C----EEEeccccc-cCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHH---HHh--ccHHHH
Confidence 2 457999997 56 6799999999988876431 1234556788888888887764 121 134556
Q ss_pred HHHHHHHHHHHhccC---CCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 364 FRERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 364 ~~~~r~~l~~~L~~l---~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.++.-+++.+.|+++ +.+.-++..| .++-+.+..... .......++++.|+++ ||.+
T Consensus 351 ~~~~g~~l~~~l~~l~~~~~v~~vrg~G-l~~~v~~~~~~~------~~~~~~~~~~~~~~~~-Gv~~ 410 (445)
T PRK09221 351 AAELAPYFEDAVHSLKGLPHVIDIRNIG-LVAGIELAPRPG------APGARGYEAFMKCFEK-GLLV 410 (445)
T ss_pred HHHHHHHHHHHHHhhccCCCEEEEecCc-eEEEEEEecccc------cccchHHHHHHHHHHC-CeEE
Confidence 666666777776655 2222233344 334454432100 0001245788888776 8875
No 334
>PRK07036 hypothetical protein; Provisional
Probab=99.49 E-value=1.9e-11 Score=124.00 Aligned_cols=319 Identities=13% Similarity=0.110 Sum_probs=183.0
Q ss_pred hcCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCC-CCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHH
Q 014172 92 QAGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNA-GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (429)
Q Consensus 92 ~~g~~~i~L~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~-G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~a 167 (429)
..|+..||+..|.. .++. +|++.+++.+.+.+..+.. ... ...+.+..+++.+.+.... ..+.|+++++++++
T Consensus 48 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~-~~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~sGseA 124 (466)
T PRK07036 48 ADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYT-PFGDMTNAPAAELAAKLAELAPG--DLNHVFLTTGGSTA 124 (466)
T ss_pred CCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccc-cccccCCHHHHHHHHHHHHhCCC--CcCEEEEeCCchHH
Confidence 35788999988862 3333 7899999999887521111 111 2345667777777655321 23589999999999
Q ss_pred HHHHHHHhc------C-CC-CEEEEcCCCCCChHHHHHHc-CC------------EEEEecCCCC--CCCCCC-------
Q 014172 168 ILQAVLAVC------S-PG-DEVIIPAPFWVSYPEMARIA-DA------------TPVILPTRIS--ENFLLD------- 217 (429)
Q Consensus 168 l~~~l~~l~------~-~g-d~Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~--~~~~~d------- 217 (429)
++.+++... . +| .+|+...-+|.+....+... |. .+..++.... ..+..+
T Consensus 125 ve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 204 (466)
T PRK07036 125 VDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDF 204 (466)
T ss_pred HHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHH
Confidence 999888752 1 22 57888888888755333221 11 1222332110 001111
Q ss_pred -HHHHHhhcc----cCCcEEEEcCCCCCccCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccc-cCCCC
Q 014172 218 -PKVLESKLT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA-SLPGM 290 (429)
Q Consensus 218 -~e~l~~~l~----~~~~~i~l~~p~NPtG~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~-~~~~~ 290 (429)
++.+++.+. +++.+|++...+.-.|.. .+++.+++|.++|++| |+++|.||++.+|...|.. .... .+.-.
T Consensus 205 ~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~-g~llI~DEV~tGfGRtG~~-~~~~~~~gv~ 282 (466)
T PRK07036 205 LVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRY-DILYISDEVVTGFGRLGHF-FASEAVFGIQ 282 (466)
T ss_pred HHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeechhCCCcCchh-hhhhhhcCCC
Confidence 233444442 245566665556556764 5677899999999999 9999999999876333321 1111 11111
Q ss_pred CCceEEEeccChhccccc-ceeeEEEcCHHHHHHHHHH-------hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHH
Q 014172 291 WERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 362 (429)
Q Consensus 291 ~~~~i~~~S~SK~~~~~G-~R~G~v~~~~~~~~~l~~~-------~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~ 362 (429)
.| +.+|+|.++ .| ..+|.+++++++.+.+... ....+++.++++.+++.+.|+. .++ +++.+
T Consensus 283 PD----ivt~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~---i~~--~~l~~ 352 (466)
T PRK07036 283 PD----IITFAKGLT-SGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEI---MER--EGLCE 352 (466)
T ss_pred CC----EEEEccccc-cCccccEEEEEcHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHH---HHh--CCHHH
Confidence 12 456899998 78 4899999999998887531 2223556788888888888864 111 12333
Q ss_pred HHHHHHHHHHHHhcc---CCCceeecCCceEEEEEecCCccCCcccCCCC-CCChHHHHHHHHHhCCeec
Q 014172 363 AFRERRDFLVKSFGE---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK-IENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 363 ~~~~~r~~l~~~L~~---l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~Ll~~~gV~v 428 (429)
..++.-+++.+.|++ .+.+.-+...|.| +.+.+...... .+-+.. ..-...+...|+++ ||.+
T Consensus 353 ~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~-~~ve~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-Gvl~ 419 (466)
T PRK07036 353 HVREVGPYFEERLASLRELPLVGDVRGDHLM-ACVECVADKGS-KALLPEDIAIGQRIDRHCQER-GLLV 419 (466)
T ss_pred HHHHHHHHHHHHHHHhccCCCEEEEEeeceE-EEEEEccCccc-cCCCCchhHHHHHHHHHHHHC-CcEE
Confidence 344444444444433 3333334455544 55666321000 000000 00134677777766 8765
No 335
>PRK07481 hypothetical protein; Provisional
Probab=99.49 E-value=2.5e-11 Score=122.81 Aligned_cols=319 Identities=15% Similarity=0.138 Sum_probs=182.1
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCC-CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPN-AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~-~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
.|+..||+..|. ..++- +|++.+++.+++.+..+ +... ....+.+..+++.+.+..+. -..+.+++++++++++
T Consensus 40 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~-~~~~~~~~~~~~~~lae~L~~~~~~-~~~~~v~f~~sGsEAv 117 (449)
T PRK07481 40 DGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEY-YSTFDGTTHPRAIELSYELIDMFAP-EGMRRVFFSSGGSDSV 117 (449)
T ss_pred CCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccc-eecccccCCHHHHHHHHHHHHhcCC-CCCCEEEEcCchHHHH
Confidence 577899998775 33443 68899999998876321 1111 11235566677777655431 1235899999999999
Q ss_pred HHHHHHhcC-------CC-CEEEEcCCCCCChHHHHHHcCC-------------EEEEecCCCCC--CCC-CCHHHH---
Q 014172 169 LQAVLAVCS-------PG-DEVIIPAPFWVSYPEMARIADA-------------TPVILPTRISE--NFL-LDPKVL--- 221 (429)
Q Consensus 169 ~~~l~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~--~~~-~d~e~l--- 221 (429)
+.+++.... +| .+|+...-+|.+....+..... .+..++..... .+. -|++.+
T Consensus 118 e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~ 197 (449)
T PRK07481 118 ETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARI 197 (449)
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHH
Confidence 999887532 23 5788888888875543322211 12222211000 011 133333
Q ss_pred -----Hhhcc----cCCcEEEEcCCCCCccCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCC
Q 014172 222 -----ESKLT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 291 (429)
Q Consensus 222 -----~~~l~----~~~~~i~l~~p~NPtG~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~ 291 (429)
++.+. +++.+|++...+.-.|.. .+.+.+++|.++|++| |+++|.||++.+|...|... ....+.-..
T Consensus 198 ~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~-g~llI~DEV~tGfGRtG~~~-a~~~~gv~P 275 (449)
T PRK07481 198 CARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRH-GILLIADEVVTGFGRTGSWF-GSRGWGVKP 275 (449)
T ss_pred HHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHc-CCEEEEeehhhCcCcCchhh-HhhhcCCCC
Confidence 33332 345566665455556764 5677899999999999 99999999999864333211 111111111
Q ss_pred CceEEEeccChhccccc-ceeeEEEcCHHHHHHHHHH-------hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHH
Q 014172 292 ERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (429)
Q Consensus 292 ~~~i~~~S~SK~~~~~G-~R~G~v~~~~~~~~~l~~~-------~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~ 363 (429)
| +-+++|.++ .| +.+|.+++++++.+.+... ....+++.++++.+++.+.|+. .++ +++.+.
T Consensus 276 D----iv~~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~---l~~--~~l~~~ 345 (449)
T PRK07481 276 D----IMCLAKGIT-SGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDI---VVR--EDLPAN 345 (449)
T ss_pred C----EEEEeeccc-CCCcCceEEEEcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHH---HHh--hhHHHH
Confidence 2 455799998 77 5899999999998887531 2234566788888888888874 111 123333
Q ss_pred HHHHHHHHHHHhcc----CCCceeecCCceEEEEEecCCccCCcccCCCC-CCChHHHHHHHHHhCCeec
Q 014172 364 FRERRDFLVKSFGE----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK-IENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 364 ~~~~r~~l~~~L~~----l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~Ll~~~gV~v 428 (429)
.++.-+++.+.|++ .+-+.-++..|-| +.+.+...... ...... ......+.+.|+++ ||.+
T Consensus 346 ~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm-~gi~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~-Gvl~ 412 (449)
T PRK07481 346 AAKRGAYLLEGLQPLKERFELVGDVRGKGLM-LALDLVADKAT-REPIDPSKGYANAVADVAREN-GVLV 412 (449)
T ss_pred HHHHHHHHHHHHHHHhhcCCCeEEEeecceE-EEEEecccccc-cCCCCchhHHHHHHHHHHHhC-CeEE
Confidence 44444445554444 3323334455544 55555321000 000000 00134677777765 8875
No 336
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.49 E-value=1.6e-11 Score=123.37 Aligned_cols=307 Identities=14% Similarity=0.102 Sum_probs=179.7
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..||+..|. ..++. +|.+.+++.+.+++........ -..+....+++.+.+..+. .-+.|++++++++++.
T Consensus 43 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~-~~~~~~~~la~~l~~~~~~--~~~~v~f~~sGseA~e 119 (427)
T TIGR00508 43 DGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFGG-FTHKPAIELCQKLVKMTPN--ALDCVFLADSGSVAVE 119 (427)
T ss_pred CCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccccc-cCCHHHHHHHHHHHhhCCC--CCCEEEEeCCcHHHHH
Confidence 578899998876 23333 6899999999887532111000 0122334455555544331 2368999999999999
Q ss_pred HHHHHhcC-------CC-CEEEEcCCCCCChHHHHHH-cCCE-------------EEEecCCCCCCCC-----CCHHHHH
Q 014172 170 QAVLAVCS-------PG-DEVIIPAPFWVSYPEMARI-ADAT-------------PVILPTRISENFL-----LDPKVLE 222 (429)
Q Consensus 170 ~~l~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~-~g~~-------------~~~v~~~~~~~~~-----~d~e~l~ 222 (429)
.+++.... +| .+|+...-+|.+....+.. .|.. ...++.. ...+. -|+++++
T Consensus 120 ~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~l~ 198 (427)
T TIGR00508 120 VALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAP-QNRFDEEWNEEAITPLA 198 (427)
T ss_pred HHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCC-CccccchhHHHHHHHHH
Confidence 88886431 23 5788888888875433222 2211 1112211 01110 1456677
Q ss_pred hhcc---cCCcEEEEcCC-CCCccC-CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEE
Q 014172 223 SKLT---EKSRLLILCSP-SNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTV 297 (429)
Q Consensus 223 ~~l~---~~~~~i~l~~p-~NPtG~-~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~ 297 (429)
+.+. .+..+|++... +.-.|. +.+.+.+++|.++|++| ++++|.||++.++...|... ....+.-..+ |+
T Consensus 199 ~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~-~~llI~DEv~tG~Gr~G~~~-~~~~~~v~pD--i~- 273 (427)
T TIGR00508 199 KLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQY-DILLIADEIATGFGRTGKLF-ACEHAGVVPD--IL- 273 (427)
T ss_pred HHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCCccc-hhhhcCCCCC--EE-
Confidence 7664 23445555442 554555 45788999999999999 99999999997754433221 1111111112 33
Q ss_pred eccChhcccccc-eeeEEEcCHHHHHHHHHHh-----hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHH
Q 014172 298 NGFSKAFAMTGW-RLGYIAGPKHFVAACNKIQ-----SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 371 (429)
Q Consensus 298 ~S~SK~~~~~G~-R~G~v~~~~~~~~~l~~~~-----~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l 371 (429)
+++|.++ .|+ .++.+++++++.+.+.... ...+++.++++..++.++|+. .++ .+..+..+++-+++
T Consensus 274 -~~gK~l~-gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~---l~~--~~~~~~~~~~~~~l 346 (427)
T TIGR00508 274 -CVGKALT-GGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAI---LLE--GEWQKQVSAIENQL 346 (427)
T ss_pred -Eechhhh-cCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHH---HHh--CCHHHHHHHHHHHH
Confidence 3899997 774 6888889999988876421 223344578888888888874 111 12345555556666
Q ss_pred HHHhccC---CCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 372 VKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 372 ~~~L~~l---~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+.|+++ +.+.-+...|.+ +-+.+... .+...+.++|+++ ||.+
T Consensus 347 ~~~L~~l~~~~~i~~vrg~G~~-~~i~~~~~-----------~~~~~~~~~l~~~-Gv~~ 393 (427)
T TIGR00508 347 KRELSPLRKNPVVKDVRVLGAI-GVVEMYKP-----------VNVEELQKKFVEQ-GVWI 393 (427)
T ss_pred HHHHHHhhcCCCEEeEeccccE-EEEEECCc-----------cCHHHHHHHHHHC-CeEE
Confidence 6666654 222222233433 55555321 2467888888876 8875
No 337
>PRK07480 putative aminotransferase; Validated
Probab=99.49 E-value=1.5e-11 Score=124.42 Aligned_cols=249 Identities=16% Similarity=0.131 Sum_probs=154.6
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 92 ~~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
..|+..||+..|. ..++. +|.+.+++.+.+.+..+.........+.+..+|+.+.+..+. ..+.+++++++++++
T Consensus 47 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~SGseA~ 124 (456)
T PRK07480 47 SEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPP--GFNHVFFTNSGSEAN 124 (456)
T ss_pred CCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCC--CcCEEEEeCCcHHHH
Confidence 3578899998875 33444 789999999998763211111112346666677777655431 236899999999999
Q ss_pred HHHHHHhcC-------CC-CEEEEcCCCCCChHHHH-HHcCCE------------EEEecCCC--CCCCCCC--------
Q 014172 169 LQAVLAVCS-------PG-DEVIIPAPFWVSYPEMA-RIADAT------------PVILPTRI--SENFLLD-------- 217 (429)
Q Consensus 169 ~~~l~~l~~-------~g-d~Vlv~~p~y~~~~~~~-~~~g~~------------~~~v~~~~--~~~~~~d-------- 217 (429)
+.+++.... +| .+|+...-+|.+..... ...|.. +..++... ...+..+
T Consensus 125 e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 204 (456)
T PRK07480 125 DTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAA 204 (456)
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHH
Confidence 999886532 33 46888887777754322 211111 11122110 0000011
Q ss_pred HHHHHhhcc----cCCcEEEEcCCCCCccCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCC
Q 014172 218 PKVLESKLT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 292 (429)
Q Consensus 218 ~e~l~~~l~----~~~~~i~l~~p~NPtG~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~ 292 (429)
++.+++.+. +++.+|++...+.-.|.+ .+.+.+++|.++|++| |+++|.||++.+|...|.. .....+.-..|
T Consensus 205 ~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~-g~llI~DEV~tGfGRtG~~-~a~~~~gv~PD 282 (456)
T PRK07480 205 ARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKY-DILLVADEVICGFGRTGEW-FGSQHFGIKPD 282 (456)
T ss_pred HHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCcCcch-hhhhhcCCCCC
Confidence 255554442 345566665555556765 5666799999999999 9999999999876333321 11111111112
Q ss_pred ceEEEeccChhcccccc-eeeEEEcCHHHHHHHHH----HhhcccCCCchHHHHHHHHHHhc
Q 014172 293 RTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNK----IQSQFTSGASSISQKAGVAALGL 349 (429)
Q Consensus 293 ~~i~~~S~SK~~~~~G~-R~G~v~~~~~~~~~l~~----~~~~~~~~~~~~~q~aa~~~l~~ 349 (429)
+-+|+|.++ .|. .+|.+++++++.+.+.. .....+++.++++.+++.+.|+.
T Consensus 283 ----iv~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~ 339 (456)
T PRK07480 283 ----LMTIAKGLT-SGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRI 339 (456)
T ss_pred ----eeeeehhhc-cCCccceEEEEcHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHH
Confidence 456899998 774 89999999999887732 22335667888899999888875
No 338
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.48 E-value=1.2e-11 Score=126.39 Aligned_cols=265 Identities=12% Similarity=0.134 Sum_probs=175.6
Q ss_pred HHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCC-C---------C-CCCcEEEecChHHHHHHHHHHhcC--------
Q 014172 117 GINAIREGFTRYTPNAGTLELRSAICHKLKEENGL-S---------Y-TPDQILVSNGAKQSILQAVLAVCS-------- 177 (429)
Q Consensus 117 ~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~-~---------~-~~~~i~~t~G~~~al~~~l~~l~~-------- 177 (429)
+...+......|..++...++.+.+.+|+.+..+. + . +...-++|+|+|++...++.+-.+
T Consensus 110 l~~~lN~n~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~ 189 (522)
T TIGR03799 110 LMVALNQNLVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGD 189 (522)
T ss_pred HHHHhcCCcceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhcccccc
Confidence 44455544455555667789999999999887641 1 1 112357788999888877665321
Q ss_pred ------------------CCCEEEEcCCCCCChHHHHHHcCC---EEEEecCCCCCCCCCCHHHHHhhcc----cCCcEE
Q 014172 178 ------------------PGDEVIIPAPFWVSYPEMARIADA---TPVILPTRISENFLLDPKVLESKLT----EKSRLL 232 (429)
Q Consensus 178 ------------------~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~e~l~~~l~----~~~~~i 232 (429)
++..|++++-.|.+....++..|. +++.+|++. ++.+|++.|++.++ .+++.+
T Consensus 190 ~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~--~g~~d~~~L~~~i~~~~~~g~~~~ 267 (522)
T TIGR03799 190 FKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDA--NNRIDVDALRDKCAELAEQNIKPL 267 (522)
T ss_pred ccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCC--CCcCCHHHHHHHHHHHHHCCCCcE
Confidence 134688899999999999999998 789999863 46799999999886 355555
Q ss_pred EEc--CCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCcccc-CCCCCCceEEEeccChhcccccc
Q 014172 233 ILC--SPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS-LPGMWERTLTVNGFSKAFAMTGW 309 (429)
Q Consensus 233 ~l~--~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~-~~~~~~~~i~~~S~SK~~~~~G~ 309 (429)
.++ ..++.||.+-| +++|+++|++| |+|+++|.+|+....-.. .+.. +.+......+..+.+|.+. ...
T Consensus 268 ~vvataGtt~tGaiDp---l~eIa~i~~~~-g~~lHVDaA~gg~~~~~~---~~r~~l~gle~aDSit~d~HK~l~-~P~ 339 (522)
T TIGR03799 268 AIVGVAGTTETGNIDP---LDEMADIAQEL-GCHFHVDAAWGGATLLSN---TYRHLLKGIERADSVTIDAHKQLY-VPM 339 (522)
T ss_pred EEEEEecCcCCCCcCC---HHHHHHHHHHc-CCeEEEEchhhhHHHhCH---HHHHHhcCchhCCEEEEChhhcCC-cCc
Confidence 443 55779999999 99999999999 999999999986432111 1111 1111234578889999764 335
Q ss_pred eeeEEEcC-HHHHHHHHHHhhc-------------ccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHh
Q 014172 310 RLGYIAGP-KHFVAACNKIQSQ-------------FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSF 375 (429)
Q Consensus 310 R~G~v~~~-~~~~~~l~~~~~~-------------~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L 375 (429)
.+|+++.. ++..+.+.....+ ...+-+..+ ..+..+|+. .+.+.++.+.++..+..+++.+.|
T Consensus 340 g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~a-l~lw~aL~~--lG~~G~~~ii~~~~~la~~l~~~L 416 (522)
T TIGR03799 340 GAGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMA-MLVYAGLHI--IGRKGYELLIDQSIEKAKYFADLI 416 (522)
T ss_pred ccEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHH-HHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHHH
Confidence 57888774 4554444321000 111112111 122233332 135678888999999999999999
Q ss_pred ccCCCceeec-CCceEEEEEe
Q 014172 376 GELEGVKMSE-PQGAFYLFID 395 (429)
Q Consensus 376 ~~l~g~~~~~-p~~~~~~~~~ 395 (429)
++.|++++.. |+-+. +.++
T Consensus 417 ~~~~~~el~~~p~l~i-v~Fr 436 (522)
T TIGR03799 417 QQQPDFELVTEPELCL-LTYR 436 (522)
T ss_pred hhCCCeEEecCCCccE-EEEE
Confidence 9998998875 44555 3344
No 339
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.48 E-value=1.1e-11 Score=134.29 Aligned_cols=316 Identities=18% Similarity=0.174 Sum_probs=189.2
Q ss_pred HHHHHHHHHHhcCC----CeEEcCCCCCCCCChHHHHHHHHHHHHcCC---CCCCC---CCCCHHHHHHHHHHHHhhcCC
Q 014172 82 AITDQATALAQAGV----SVIRLAAGEPDFDTPVLIAEAGINAIREGF---TRYTP---NAGTLELRSAICHKLKEENGL 151 (429)
Q Consensus 82 ~~~~~~~~~~~~g~----~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~---~~Y~~---~~G~~~lr~~ia~~l~~~~g~ 151 (429)
++.+..+++.+.+. .+|-|+.-..- .++.+...+... .++ +-|.| .+|..++...+.+++.+..|.
T Consensus 482 e~~r~~~~l~~kn~~~~~~~i~lGsct~~--~~p~~~~~~~~~--~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG~ 557 (954)
T PRK05367 482 EMMRYLRRLEDKDLALDRSMIPLGSCTMK--LNAAAEMIPITW--PEFANLHPFAPAEQAAGYRELIDQLEAWLAEITGY 557 (954)
T ss_pred HHHHHHHHHHhcCcCcccceeeCCcCCCc--CCHHHHHHHHhC--ccccccCCCChHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 55555666655442 35666662222 233333332221 123 33444 256778888889999988884
Q ss_pred CCCCCcEEEec-ChHHHHHHHHHHh----cCCCC----EEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHH
Q 014172 152 SYTPDQILVSN-GAKQSILQAVLAV----CSPGD----EVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLE 222 (429)
Q Consensus 152 ~~~~~~i~~t~-G~~~al~~~l~~l----~~~gd----~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~ 222 (429)
+ ++.+.. |++++....+.++ ..+|| .|++++..|.+....+...|.+++.++++.+ +.+|+++|+
T Consensus 558 d----~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~--G~iD~~~L~ 631 (954)
T PRK05367 558 D----AVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDEN--GNIDLDDLR 631 (954)
T ss_pred C----CEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCC--CCcCHHHHH
Confidence 2 455544 5555554444333 25665 5999999999988899999999999998743 469999999
Q ss_pred hhccc---CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEec
Q 014172 223 SKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNG 299 (429)
Q Consensus 223 ~~l~~---~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S 299 (429)
+++++ ++.+|++++|++-.+...+ +++|+++|+++ |+++++|.++...... +. .+...+-.++..|
T Consensus 632 ~~i~~~~~~la~V~it~pst~G~~e~~---I~eI~~i~h~~-G~~v~VDgA~~~al~~------l~-~pg~~GADi~~~s 700 (954)
T PRK05367 632 AKAEEHADNLAAIMITYPSTHGVFEET---IREICEIVHEH-GGQVYLDGANMNAQVG------LA-RPGDIGADVSHLN 700 (954)
T ss_pred HHHhccCCCeEEEEEEcCCCCeeecCC---HHHHHHHHHHc-CCEEEEECcChhhccC------CC-ChhhcCCCEEEec
Confidence 99965 4667778888875444467 99999999999 9999999999632111 11 1122455689999
Q ss_pred cChhcc----cccceeeEEEcCHHHHHHHHHHh-----h---cccCCCchHHHHH----HHHHHhcCCCChHHHHHHHHH
Q 014172 300 FSKAFA----MTGWRLGYIAGPKHFVAACNKIQ-----S---QFTSGASSISQKA----GVAALGLGYAGGEVVSKMVKA 363 (429)
Q Consensus 300 ~SK~~~----~~G~R~G~v~~~~~~~~~l~~~~-----~---~~~~~~~~~~q~a----a~~~l~~~~~~~~~~~~~~~~ 363 (429)
.+|+|+ ..|..+|++.+.+++...+-... . ....+.+.+.|.. +..++.. .+.+.+++..+.
T Consensus 701 ~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~--~G~~Glr~~a~~ 778 (954)
T PRK05367 701 LHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRM--MGAEGLRQATEV 778 (954)
T ss_pred CcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHH--HCHHHHHHHHHH
Confidence 999974 24555888887765544432211 0 0111112222211 1222221 145667777777
Q ss_pred HHHHHHHHHHHhccCCCceeecCCceEE--EEEecCCccCCcccCCCCCCChHHHHHHHHHhCCee
Q 014172 364 FRERRDFLVKSFGELEGVKMSEPQGAFY--LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVL 427 (429)
Q Consensus 364 ~~~~r~~l~~~L~~l~g~~~~~p~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~ 427 (429)
.-.+.+++.++|++...+.+..|.+.++ +.+++..... ....+..+++++|++. |+.
T Consensus 779 ~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~~~~~~~~------~~g~~~~di~krL~d~-G~~ 837 (954)
T PRK05367 779 AILNANYIAKRLKDHYPVLYTGANGRVAHECILDLRPLKE------STGITVDDIAKRLIDY-GFH 837 (954)
T ss_pred HHHHHHHHHHHHHhhcCccccCCCCCcccceEEEeecccc------cCCCCHHHHHHHHHHC-CCe
Confidence 7788999999997742443333322111 2233321100 0002568999999664 664
No 340
>PRK07483 hypothetical protein; Provisional
Probab=99.46 E-value=4e-11 Score=120.97 Aligned_cols=318 Identities=12% Similarity=0.086 Sum_probs=180.8
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..||+..|. ..++- +|.+.+++.+.+.+... +.......+....+++.+.+.... ..+.+++++++++++.
T Consensus 28 dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~-~~~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~sGsEAve 104 (443)
T PRK07483 28 TGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAY-AHTSFFTTEPAEALADRLVAAAPA--GLEHVYFVSGGSEAVE 104 (443)
T ss_pred CCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccC-ccccccCCHHHHHHHHHHHHhCCC--CCCEEEEcCCcHHHHH
Confidence 577899998885 33444 78999999999875321 111111245556677777654321 2368999999999999
Q ss_pred HHHHHhcC-------CC-CEEEEcCCCCCChHHHHHH-cCC------------EEEEecCCCCCCC---CC--------C
Q 014172 170 QAVLAVCS-------PG-DEVIIPAPFWVSYPEMARI-ADA------------TPVILPTRISENF---LL--------D 217 (429)
Q Consensus 170 ~~l~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~~---~~--------d 217 (429)
.+++.... +| .+|+...-+|++....+.. .|- .+..++.....+. .. .
T Consensus 105 ~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (443)
T PRK07483 105 AALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRL 184 (443)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHH
Confidence 98886531 33 4688888888876432222 111 1122221110000 00 0
Q ss_pred HHHHHhhcc----cCCcEEEEcCCCC-Ccc-CCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCC
Q 014172 218 PKVLESKLT----EKSRLLILCSPSN-PTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 291 (429)
Q Consensus 218 ~e~l~~~l~----~~~~~i~l~~p~N-PtG-~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~ 291 (429)
++.+++.+. +++.+|++...+. -.| ...+++.+++|.++|++| |+++|.||++.+|...|.. .....+.-..
T Consensus 185 ~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~-gillI~DEV~tGfGRtG~~-~a~~~~gv~P 262 (443)
T PRK07483 185 ADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRY-GVLLILDEVMCGMGRTGTL-FACEEDGVAP 262 (443)
T ss_pred HHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHh-CCEEEEecceeCcccCcHH-HHHhhcCCCC
Confidence 255666553 3455666544442 235 455778899999999999 9999999999876433321 1111111111
Q ss_pred CceEEEeccChhcccccc-eeeEEEcCHHHHHHHHHH----hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 014172 292 ERTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNKI----QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRE 366 (429)
Q Consensus 292 ~~~i~~~S~SK~~~~~G~-R~G~v~~~~~~~~~l~~~----~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~ 366 (429)
| +-+++|.++ .|. .+|.+++++++.+.+... ....+++.++++.+++.+.|+. .++ +++.+..++
T Consensus 263 D----iv~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~---i~~--~~l~~~~~~ 332 (443)
T PRK07483 263 D----LVTIAKGLG-AGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRV---IAE--DGLLANVRA 332 (443)
T ss_pred C----eeeehhhhc-cCccccEEEEEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHH---HHh--cCHHHHHHH
Confidence 2 555899998 885 999999999998877532 1234566788888888888864 111 123333334
Q ss_pred HHHHHHHHhc----cCCCceeecCCceEEEEEecCCccCCcccCCCC-CCChHHHHHHHHHhCCeec
Q 014172 367 RRDFLVKSFG----ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK-IENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 367 ~r~~l~~~L~----~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~Ll~~~gV~v 428 (429)
.-+++.+.|+ +.+.+.-++..|-| +-+.+....... ..+.. ......+.+.++++ ||.+
T Consensus 333 ~g~~l~~~L~~l~~~~~~i~~vRG~Glm-~gie~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-Gll~ 396 (443)
T PRK07483 333 RGEQLRARLRERLGQHPHVGDIRGRGLF-VGVELVADRATK-APFDPALKLHARIKREAMAR-GLMV 396 (443)
T ss_pred HHHHHHHHHHHHHhcCCCeeeEeecccE-EEEEEeeccccc-CCCCchhhHHHHHHHHHHHC-CcEE
Confidence 4444444443 34333333455544 445442110000 00000 00134677887776 8765
No 341
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.46 E-value=3.8e-11 Score=121.73 Aligned_cols=324 Identities=13% Similarity=0.049 Sum_probs=184.0
Q ss_pred hcCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCC---CCCCcEEEecChH
Q 014172 92 QAGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLS---YTPDQILVSNGAK 165 (429)
Q Consensus 92 ~~g~~~i~L~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~---~~~~~i~~t~G~~ 165 (429)
..|+..||+..|.. .++- +|++.+++.+.+++-.+.. ...-..+.+..+++.+.+..... -..+.|+++++++
T Consensus 61 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~-~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGS 139 (472)
T PRK08742 61 HDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVM-LAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGS 139 (472)
T ss_pred CCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCcc-ccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCch
Confidence 35788999988853 3343 6889999998876421111 11112345667777776544210 0235899999999
Q ss_pred HHHHHHHHHhcC-------CC-CEEEEcCCCCCChHHHHHHcCC-------------EEEEecCCCCC--CCCC------
Q 014172 166 QSILQAVLAVCS-------PG-DEVIIPAPFWVSYPEMARIADA-------------TPVILPTRISE--NFLL------ 216 (429)
Q Consensus 166 ~al~~~l~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~--~~~~------ 216 (429)
+++..+++.... +| .+|+...-+|.+....+...+. .+..+|..... .+..
T Consensus 140 EAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~ 219 (472)
T PRK08742 140 AGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYA 219 (472)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHH
Confidence 999999887532 22 6788888888876544333211 12223321100 0011
Q ss_pred --CHHHHHhhcc---cCCcEEEEcC-CCCCccC-CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCC
Q 014172 217 --DPKVLESKLT---EKSRLLILCS-PSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 289 (429)
Q Consensus 217 --d~e~l~~~l~---~~~~~i~l~~-p~NPtG~-~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~ 289 (429)
+++.+++.+. +++.+|++.. .++-.|. +.+++.++++.++|++| |+++|.||++.+|...|... ....+.-
T Consensus 220 ~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~-gillI~DEV~TGfGRtG~~~-a~e~~gv 297 (472)
T PRK08742 220 LQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAH-GAFLIADEIATGFGRTGTLF-ACEQAGV 297 (472)
T ss_pred HHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCCCccch-HHHhcCC
Confidence 2466666664 3455555543 2555676 55778899999999999 99999999999874444211 1111111
Q ss_pred CCCceEEEeccChhcccccc-eeeEEEcCHHHHHHHHHH------hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHH
Q 014172 290 MWERTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNKI------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 362 (429)
Q Consensus 290 ~~~~~i~~~S~SK~~~~~G~-R~G~v~~~~~~~~~l~~~------~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~ 362 (429)
..| +-+++|.++ .|. .+|.+++++++.+.+... ....+++.++++.+++.+.|+.- .++.+.+..+
T Consensus 298 ~PD----iv~~gKgl~-gG~~Plaav~~~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i--~~~~l~~~~~ 370 (472)
T PRK08742 298 MPD----LLCLSKGLT-GGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIF--ADDDVIARNQ 370 (472)
T ss_pred CCC----EEEEccccc-CCCCCcceeeccHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHH--HHCCHHHHHH
Confidence 111 455799998 784 899999999998876421 12345567888888888888641 0112222222
Q ss_pred HHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCC-ChHHHHHHHHHhCCeec
Q 014172 363 AFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE-NSESLCRYLLDKAQVLL 428 (429)
Q Consensus 363 ~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~Ll~~~gV~v 428 (429)
+..++...+.+.+++.+.+.-++..|-| +-+.+...... .+.+.... -...+.++++++ ||.+
T Consensus 371 ~~g~~l~~~~~~~~~~~~i~dvRG~Gl~-~giel~~~~~~-~~~~~~~~~~~~~~~~~~~~~-Gll~ 434 (472)
T PRK08742 371 PTAARMTQLAAQIGEHPHVADVRQAGMV-VAFELTRGGNK-RTPFPPAARVGLHAYRAALAR-GVVL 434 (472)
T ss_pred HHHHHHHHHHHHHhcCCCeeeEeccceE-EEEEeccCccc-cccCCchhHHHHHHHHHHHHC-CeEE
Confidence 2222222334444555444444555544 44555321000 00000000 124577777766 8764
No 342
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.46 E-value=8.5e-12 Score=125.64 Aligned_cols=233 Identities=18% Similarity=0.233 Sum_probs=141.8
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 92 ~~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
..|+..||+..|. ..++- +|.+.+++.+.+.+.. .++. ....+-.+++.+.+... ..+.+++++++++++
T Consensus 45 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~-~~~~---~~~~~~~la~~l~~~~p---~~~~v~f~~sGseA~ 117 (431)
T PRK06209 45 VDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGC-NFTR---PSAIELDAAESFLELID---GADMVKFCKNGSDAT 117 (431)
T ss_pred CCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCc-CCCC---CCHHHHHHHHHHHHhCC---ccceEEEecCHHHHH
Confidence 3578899998876 33443 7899999999987643 2321 23334445555554432 236899999999999
Q ss_pred HHHHHHhcC-CC-CEEEEc-CCCCCChHHHH----HH-cCC------EEEEecCCCCCCCCCCHHHHHhhccc---CCcE
Q 014172 169 LQAVLAVCS-PG-DEVIIP-APFWVSYPEMA----RI-ADA------TPVILPTRISENFLLDPKVLESKLTE---KSRL 231 (429)
Q Consensus 169 ~~~l~~l~~-~g-d~Vlv~-~p~y~~~~~~~----~~-~g~------~~~~v~~~~~~~~~~d~e~l~~~l~~---~~~~ 231 (429)
..+++.... .| ..|+.. .-+|.++.... .. .|. .+..++ . -|++.+++.+.. +..+
T Consensus 118 e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~---~d~~~l~~~l~~~~~~~aa 190 (431)
T PRK06209 118 SAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR----Y---NDIASLEALFEDHPGRIAC 190 (431)
T ss_pred HHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccC----C---CCHHHHHHHHHhCCCCEEE
Confidence 999886532 24 345544 23332211100 00 010 011111 1 178999888752 3444
Q ss_pred EEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccccccee
Q 014172 232 LILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRL 311 (429)
Q Consensus 232 i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~ 311 (429)
|++ -|- .|...+.+.+++|.++|++| |+++|.||++.++...+........+. .+ +.+|+|.+| .|..+
T Consensus 191 vi~-Epv--~g~~~~~~~l~~l~~lc~~~-g~lLI~DEv~tG~~~~~~g~~~~~gv~--PD----i~t~gK~lg-gG~p~ 259 (431)
T PRK06209 191 VIL-EPA--TADEPQDGFLHEVRRLCHEN-GALFILDEMITGFRWHMRGAQKLYGIV--PD----LSCFGKALG-NGFAV 259 (431)
T ss_pred EEE-ccc--cCCCCCHHHHHHHHHHHHHc-CCEEEEEcccccCCcCcchhhHHhCCC--cc----eeeehhhhc-CCccc
Confidence 444 442 35577888999999999999 999999999977643211111111111 12 577999998 78899
Q ss_pred eEEEcCHHHHHH--HHHH--h----hcccCCCchHHHHHHHHHHhc
Q 014172 312 GYIAGPKHFVAA--CNKI--Q----SQFTSGASSISQKAGVAALGL 349 (429)
Q Consensus 312 G~v~~~~~~~~~--l~~~--~----~~~~~~~~~~~q~aa~~~l~~ 349 (429)
|++++++++++. +... . ...++++++++.+++.+.|+.
T Consensus 260 ~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~ 305 (431)
T PRK06209 260 SALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAI 305 (431)
T ss_pred EEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHH
Confidence 999999988876 3111 1 123444566777777777764
No 343
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.46 E-value=2e-11 Score=126.93 Aligned_cols=153 Identities=14% Similarity=0.147 Sum_probs=110.4
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCC----CCCH-----HHHHhh
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENF----LLDP-----KVLESK 224 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~----~~d~-----e~l~~~ 224 (429)
.....++++|+|.++..++++++.+||.||+++.+|-+....+.+.|+++++++... +.+ .+++ +.|+++
T Consensus 210 Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~-n~~Gi~g~I~~~~~~~e~I~~~ 288 (713)
T PRK15399 210 AEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTR-NALGILGGIPRREFTRDSIEEK 288 (713)
T ss_pred CCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccc-cccCCcCCCChhhccHHHHHHH
Confidence 446789999999999999999999999999999999999999999999999997543 222 2445 888888
Q ss_pred ccc-----CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcc-cccCCCCC-CccccC-CCCCCceEE
Q 014172 225 LTE-----KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPATH-TSFASL-PGMWERTLT 296 (429)
Q Consensus 225 l~~-----~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~-~~~~~~~~-~~~~~~-~~~~~~~i~ 296 (429)
+.. ++++++|++|+. -|.+++ +++|++.|. --+|++||||+. +.|.+... .+.... .+....+++
T Consensus 289 i~~~p~~~~p~~vvit~pTY-dGi~yd---~~~I~~~~g---~~~ilvDEAhgah~~F~p~~~~~sam~~~~~aD~~i~~ 361 (713)
T PRK15399 289 VAATTQAQWPVHAVITNSTY-DGLLYN---TDWIKQTLD---VPSIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVIFE 361 (713)
T ss_pred HHhCCCcCCceEEEEECCCC-CceeeC---HHHHHHHhC---CCEEEEeccchhhhhcCcccCCcChhhCCCCCCeeeee
Confidence 853 346888999965 899999 777888772 224569999985 33443111 111111 122334567
Q ss_pred EeccChhcccccceee-EEEc
Q 014172 297 VNGFSKAFAMTGWRLG-YIAG 316 (429)
Q Consensus 297 ~~S~SK~~~~~G~R~G-~v~~ 316 (429)
+.|.+|.+ +++.-+ ++..
T Consensus 362 tQStHKtL--~alTQaS~iHv 380 (713)
T PRK15399 362 TQSTHKML--AAFSQASLIHI 380 (713)
T ss_pred eeehhccc--cccchheeeee
Confidence 99999998 455444 4434
No 344
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.45 E-value=4.3e-11 Score=121.33 Aligned_cols=318 Identities=12% Similarity=0.089 Sum_probs=184.8
Q ss_pred hcCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCC-CCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHH
Q 014172 92 QAGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNA-GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (429)
Q Consensus 92 ~~g~~~i~L~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~-G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~a 167 (429)
..|+..||+..|.. .++- +|++.+++.+.+++.. +.... -..+....+++.+.+.... ..+.++++++++++
T Consensus 53 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~--~~~~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~SGseA 128 (460)
T PRK06916 53 VNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIA--HSTLLGLANVPSILLAEKLIEVVPE--GLKKVFYSDSGATA 128 (460)
T ss_pred CCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCC--CccccccCCHHHHHHHHHHHHhCCC--CCCEEEEeCCcHHH
Confidence 35788999987752 3343 7889999999987521 11111 1234556677776654431 23589999999999
Q ss_pred HHHHHHHhcC-------CC-CEEEEcCCCCCChHHHHHHc-CC------------EEEEecCCCCC--CCC--------C
Q 014172 168 ILQAVLAVCS-------PG-DEVIIPAPFWVSYPEMARIA-DA------------TPVILPTRISE--NFL--------L 216 (429)
Q Consensus 168 l~~~l~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~~--~~~--------~ 216 (429)
+..+++.... +| ..|+....+|.+....+... |. .+..+|..... .+. -
T Consensus 129 ve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~ 208 (460)
T PRK06916 129 VEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKK 208 (460)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHH
Confidence 9999887542 33 67888888888755433322 21 12223321100 000 1
Q ss_pred CHHHHHhhcc---cCCcEEEEcC-CCCCccCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCC
Q 014172 217 DPKVLESKLT---EKSRLLILCS-PSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 291 (429)
Q Consensus 217 d~e~l~~~l~---~~~~~i~l~~-p~NPtG~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~ 291 (429)
+++.+++.+. ++..+|++.. .+.-.|.+ .+++.+++|.++|++| |+++|.||++.+|...|.. .....+.-..
T Consensus 209 ~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~-g~llI~DEV~TG~GRtG~~-~a~~~~gv~P 286 (460)
T PRK06916 209 HLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKY-NVLFITDEVATGFGRTGKM-FACEHENVTP 286 (460)
T ss_pred HHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHc-CCEEEeechhhCCCcCchh-hHHHhcCCCC
Confidence 3456666664 3455665544 35556765 5888899999999999 9999999999876333321 1111111111
Q ss_pred CceEEEeccChhccccc-ceeeEEEcCHHHHHHHHH-------HhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHH
Q 014172 292 ERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNK-------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (429)
Q Consensus 292 ~~~i~~~S~SK~~~~~G-~R~G~v~~~~~~~~~l~~-------~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~ 363 (429)
| +-+++|.++ .| +.+|.+++.+++.+.+.. .....+++.++++..++.+.|+. .++ +++.+.
T Consensus 287 D----iv~~gK~l~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~---l~~--~~l~~~ 356 (460)
T PRK06916 287 D----IMTAGKGLT-GGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLEL---YEK--TNLIEQ 356 (460)
T ss_pred C----eeeeehhhh-cCccccceeeecHHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHH---HHh--ccHHHH
Confidence 2 446899998 78 599999999999887642 11233555688888888888764 111 123344
Q ss_pred HHHHHHHHHHHhccC---CCceeecCCceEEEEEecCCccCCcccCCCCCCC-hHHHHHHHHHhCCeec
Q 014172 364 FRERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN-SESLCRYLLDKAQVLL 428 (429)
Q Consensus 364 ~~~~r~~l~~~L~~l---~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~Ll~~~gV~v 428 (429)
.+++-+++.+.|+++ +.+.-++..|-| +-+.+..... ..+.+..... ...+...|+++ ||.+
T Consensus 357 ~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm-~giel~~~~~-~~~~~~~~~~~~~~i~~~~~~~-Gvl~ 422 (460)
T PRK06916 357 VARKTEYVATQLEDLFALKHVGDIRQLGLM-VGIELVKNKE-TKEPFEWTERVGVQVCKRSREL-GMLT 422 (460)
T ss_pred HHHHHHHHHHHHHHhhcCCCeEEeecCCce-eeEEeecccc-cccCCCchhhHHHHHHHHHHHC-CeEE
Confidence 444555555555543 333334455544 4444421100 0000000001 24677777765 8865
No 345
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.45 E-value=5.6e-11 Score=120.46 Aligned_cols=249 Identities=16% Similarity=0.123 Sum_probs=151.2
Q ss_pred hcCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCC-CcEEEe-cChHH
Q 014172 92 QAGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTP-DQILVS-NGAKQ 166 (429)
Q Consensus 92 ~~g~~~i~L~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-~~i~~t-~G~~~ 166 (429)
..|+.+||+..|.. .++- +|.+.+++.+.+.+... +....-..+.+..+++.+.+........ +.++++ +++++
T Consensus 60 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~-~~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSE 138 (464)
T PRK06938 60 VEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELP-LHTLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTD 138 (464)
T ss_pred CCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhc-ccccccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHH
Confidence 35788999988863 3343 78999999998864321 1111112345555666665433211111 356565 78999
Q ss_pred HHHHHHHHhcC-CC-CEEEEcCCCCCChHHHHHH-cCC------------EEEEecCCCCCC--CC--------CCHHHH
Q 014172 167 SILQAVLAVCS-PG-DEVIIPAPFWVSYPEMARI-ADA------------TPVILPTRISEN--FL--------LDPKVL 221 (429)
Q Consensus 167 al~~~l~~l~~-~g-d~Vlv~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~--~~--------~d~e~l 221 (429)
++..+++.... .| .+|+...-+|.+....+.. .|. .+..+|...... +. .+++.+
T Consensus 139 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 218 (464)
T PRK06938 139 AVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYL 218 (464)
T ss_pred HHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHH
Confidence 99988887532 33 6788888888876543332 111 123333321100 00 135677
Q ss_pred Hhhccc------CCcEEEEcCCCCCccCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCce
Q 014172 222 ESKLTE------KSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERT 294 (429)
Q Consensus 222 ~~~l~~------~~~~i~l~~p~NPtG~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~ 294 (429)
++.+.. ++.+|++...+.-.|.+ .+.+.+++|.++|++| |+++|.||+..+|...|.. .....+.-..|
T Consensus 219 ~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~-giLlI~DEV~tGfGRtG~~-~a~e~~gv~PD-- 294 (464)
T PRK06938 219 ENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEA-GIPLIVDEIQSGFGRTGKM-FAFEHAGIIPD-- 294 (464)
T ss_pred HHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCcHH-HHHHhcCCCCC--
Confidence 777752 34555554344445665 4588899999999999 9999999999987433321 11111111111
Q ss_pred EEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhc
Q 014172 295 LTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL 349 (429)
Q Consensus 295 i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~ 349 (429)
+-+++|.+| .|..+|.+++.+++ +.+.......+++.++++.+++.+.|+.
T Consensus 295 --iv~~gKglg-gG~PlsAv~~~~~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~ 345 (464)
T PRK06938 295 --VVVLSKAIG-GSLPLAVVVYREWL-DTWQPGAHAGTFRGNQMAMAAGSATLRY 345 (464)
T ss_pred --EEEeecccc-CCCceEEEeehhHh-hccCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 555899998 88999999998774 4443222334566788888888888874
No 346
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.45 E-value=4.9e-11 Score=120.93 Aligned_cols=318 Identities=12% Similarity=0.052 Sum_probs=183.5
Q ss_pred cCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..||+..|.. .++- +|.+.+++.+.+.+..+.. ...-..+.+..+++.+.+... -..+.|+++++++++.+
T Consensus 45 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~-~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEAve 121 (466)
T PRK07030 45 EGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVI-LAGFSHEPVIELSERLVKITP--PGLSRCFYADNGSSAIE 121 (466)
T ss_pred CCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCcc-ccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHHHH
Confidence 5778999988852 3343 6889999999887632111 111124556667777765432 12358999999999999
Q ss_pred HHHHHhcC-------CC-CEEEEcCCCCCChHHHHHHc-CC------------EEEEecCCCCC--CCCC--------CH
Q 014172 170 QAVLAVCS-------PG-DEVIIPAPFWVSYPEMARIA-DA------------TPVILPTRISE--NFLL--------DP 218 (429)
Q Consensus 170 ~~l~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~~--~~~~--------d~ 218 (429)
.+++.... +| .+|+...-+|.+....+... |. .+..+|..... .+.. ++
T Consensus 122 ~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l 201 (466)
T PRK07030 122 VALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMF 201 (466)
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHH
Confidence 99887521 23 56888888888765433322 21 12223321100 0001 24
Q ss_pred HHHHhhcc---cCCcEEEEcC-CCCCccC-CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCc
Q 014172 219 KVLESKLT---EKSRLLILCS-PSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 293 (429)
Q Consensus 219 e~l~~~l~---~~~~~i~l~~-p~NPtG~-~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~ 293 (429)
+.+++.+. ++..+|++.- .+.-.|. ..+++.+++|.++|++| |+++|.||++.+|...|.. .....+.-..|
T Consensus 202 ~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~-g~llI~DEV~TGfGRtG~~-~a~~~~gv~PD- 278 (466)
T PRK07030 202 AHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRY-GVHLIHDEIAVGFGRTGTM-FACEQAGIRPD- 278 (466)
T ss_pred HHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHc-CCEEEEeehhhCcCccccc-hHHHhcCCCCC-
Confidence 55666664 3455555543 2454565 55667899999999999 9999999999886433321 11111111112
Q ss_pred eEEEeccChhccccc-ceeeEEEcCHHHHHHHHH-------HhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 014172 294 TLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNK-------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFR 365 (429)
Q Consensus 294 ~i~~~S~SK~~~~~G-~R~G~v~~~~~~~~~l~~-------~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~ 365 (429)
+-+|+|.++ .| ..+|.+++++++.+.+.. .....+++.++++.+++.+.|+. .++ +++.+..+
T Consensus 279 ---iv~~gKgl~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~---i~~--~~l~~~~~ 349 (466)
T PRK07030 279 ---FLCLSKALT-GGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDI---FEQ--DNVIENNR 349 (466)
T ss_pred ---EEeeehhcc-CCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHH---HHh--cCHHHHHH
Confidence 455799998 88 499999999999887742 12334556788888888888874 111 12333334
Q ss_pred HHHHHHHHHhcc---CCCceeecCCceEEEEEecCCccCCcccCCCC-CCChHHHHHHHHHhCCeec
Q 014172 366 ERRDFLVKSFGE---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK-IENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 366 ~~r~~l~~~L~~---l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~Ll~~~gV~v 428 (429)
+.-+++.+.|++ .+.+.-++..|-| +-+.+..... ....+.. ......+.++++++ ||.+
T Consensus 350 ~~G~~l~~~L~~l~~~~~v~~vrG~Gl~-~gie~~~~~~-~~~~~~~~~~~~~~i~~~~~~~-Gvl~ 413 (466)
T PRK07030 350 ALARRMAEATAHLADHPHVAEVRQTGMI-LAIEMVQDKA-SKTPYPWQERRGLKVYQHALER-GALL 413 (466)
T ss_pred HHHHHHHHHHHHHhcCCCEEEeEeceeE-EEEEeccCcc-ccccCcchhHHHHHHHHHHHHC-CeEE
Confidence 444444444443 3434334455544 5555532100 0000000 00124677777776 8765
No 347
>PRK06149 hypothetical protein; Provisional
Probab=99.45 E-value=6.4e-11 Score=130.25 Aligned_cols=315 Identities=15% Similarity=0.126 Sum_probs=179.2
Q ss_pred cCCCeEEcCCCCCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHH
Q 014172 93 AGVSVIRLAAGEPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 171 (429)
Q Consensus 93 ~g~~~i~L~~g~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~ 171 (429)
.|+.+||+..|...++- +|.+.+++.+.+....+. .. ...+....+++.+.+.... ..+.++++++|+++...+
T Consensus 583 dG~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~~~--~~-~~~~~~~elae~L~~~~p~--~~~~v~f~~SGsEA~e~A 657 (972)
T PRK06149 583 AGRSYLDMVNNVTVLGHGHPRLAAAAARQWSLLNTN--SR-FHYAAVAEFSERLAALAPD--GLDTVFLVNSGSEANDLA 657 (972)
T ss_pred CCCEEEECCCCccccCCCCHHHHHHHHHHHHhcccc--cc-ccCHHHHHHHHHHHHhCCC--CcCEEEEeCCchHHHHHH
Confidence 57889999988766663 799999999988753221 11 1234556666666654421 236899999999999999
Q ss_pred HHHhc--CCCCEEEEcCCCCCChHHHHH-HcCC-------------EEEEecCCCC--CCCC-CC-----HHHHHhhcc-
Q 014172 172 VLAVC--SPGDEVIIPAPFWVSYPEMAR-IADA-------------TPVILPTRIS--ENFL-LD-----PKVLESKLT- 226 (429)
Q Consensus 172 l~~l~--~~gd~Vlv~~p~y~~~~~~~~-~~g~-------------~~~~v~~~~~--~~~~-~d-----~e~l~~~l~- 226 (429)
++... .....|+..+-+|.+....+. ..+. .+..++.... ..|. .+ .+.+++.+.
T Consensus 658 lklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~ 737 (972)
T PRK06149 658 IRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEE 737 (972)
T ss_pred HHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHH
Confidence 88432 122567777777776442221 1110 0122222110 0011 11 233333332
Q ss_pred -----cCCcEEEEcCCCCCcc-CCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEecc
Q 014172 227 -----EKSRLLILCSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGF 300 (429)
Q Consensus 227 -----~~~~~i~l~~p~NPtG-~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 300 (429)
+++.+|++.......| .+.+++.+++|.++|++| |+++|.||++.+|...|.....+..+.-..| +-+|
T Consensus 738 ~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~-g~llI~DEV~tGfGRtG~~~~a~e~~gv~PD----ivt~ 812 (972)
T PRK06149 738 LDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRAR-GGVCIADEVQVGYGRLGHYFWGFEQQGVVPD----IITM 812 (972)
T ss_pred HhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHc-CCEEEEEeehhcCCccCccchhhhhcCCCCC----EEEe
Confidence 2344555543344345 556778899999999999 9999999999775333321111211211112 3478
Q ss_pred ChhcccccceeeEEEcCHHHHHHHHHH-hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc--
Q 014172 301 SKAFAMTGWRLGYIAGPKHFVAACNKI-QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-- 377 (429)
Q Consensus 301 SK~~~~~G~R~G~v~~~~~~~~~l~~~-~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-- 377 (429)
+|.+| .|..+|.+++.+++.+.+... ....+++.++++.+++.+.|+. .++ +++.+..++.-+++.+.|++
T Consensus 813 gK~lg-~G~Pl~av~~~~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~---i~~--e~l~~~~~~~G~~l~~~L~~l~ 886 (972)
T PRK06149 813 AKGMG-NGHPLGAVITRREIAEALEAEGYFFSSTGGSPVSCRIGMAVLDV---LRE--EKLQENARRVGDHLKARLEALA 886 (972)
T ss_pred ccccc-CCeeeEEEEEcHHHHhhhccCCcccCCCCCCHHHHHHHHHHHHH---HHh--cCHHHHHHHHHHHHHHHHHHHH
Confidence 99999 889999999999998887641 1123346788888888888874 111 12333333344444444443
Q ss_pred --CCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 378 --LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 378 --l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+-+..++..|-| +-+.+-...... +. .......++++|+++ ||.+
T Consensus 887 ~~~~~i~~vrG~Gl~-~gvel~~~~~~~-~~--~~~~~~~i~~~l~~~-Gvl~ 934 (972)
T PRK06149 887 DRHPLIGAVHGMGLY-LGVELVRDRQTL-EP--ATEETAAICDRLLEL-GVIM 934 (972)
T ss_pred HhCCCeEEEeecceE-EEEEEecCcccC-CC--ChHHHHHHHHHHHhC-CeEE
Confidence 3333344455544 555552100000 00 001245788888876 8875
No 348
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.44 E-value=6.7e-11 Score=125.48 Aligned_cols=275 Identities=17% Similarity=0.167 Sum_probs=171.2
Q ss_pred CCCCC---CCCCHHHHHHHHHHHHhhcCCCCCCCcEEEec-ChHHHHHHHHHHhc----CCC----CEEEEcCCCCCChH
Q 014172 126 TRYTP---NAGTLELRSAICHKLKEENGLSYTPDQILVSN-GAKQSILQAVLAVC----SPG----DEVIIPAPFWVSYP 193 (429)
Q Consensus 126 ~~Y~~---~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~-G~~~al~~~l~~l~----~~g----d~Vlv~~p~y~~~~ 193 (429)
+-|.| .+|+.++...+.+++.+..|.+. +.+-. +++.+....++++. .+| ++|+++.-.|....
T Consensus 530 hPyqp~e~sQG~lq~i~elq~~l~eLtGmd~----~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNp 605 (954)
T PRK12566 530 HPFAPREQAEGYRAMIDELEAWLCAITGFDA----ICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNP 605 (954)
T ss_pred CCCCchhhhcCHHHHHHHHHHHHHHHHCCCe----EeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCH
Confidence 66777 78999999999999998888543 34444 44544544555542 222 67889998887667
Q ss_pred HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc---cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccC
Q 014172 194 EMARIADATPVILPTRISENFLLDPKVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 270 (429)
Q Consensus 194 ~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~---~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Dea 270 (429)
..+...|++++.++.+++ +.+|+++|++.++ +++.+|.+.+|++-++.. +.+++|+++|+++ |.+|++|.+
T Consensus 606 asa~~~GieVv~Vp~D~~--G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e---~~V~eI~~iah~~-Galv~vDgA 679 (954)
T PRK12566 606 ASAQMAGMRVVIVECDPD--GNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYE---EGIREICEVVHQH-GGQVYMDGA 679 (954)
T ss_pred HHHHHCCCEEEEeccCCC--CCcCHHHHHHHhhccCCCEEEEEEEecCcCceec---chHHHHHHHHHHc-CCEEEEEee
Confidence 778889999999999743 4699999999987 577777888888754443 4499999999999 999999999
Q ss_pred CcccccCCCCCCccccCCCCCCceEEEeccChhccc----ccceeeEEEcCHHHHHHHHHHhh---------cc---cCC
Q 014172 271 YEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM----TGWRLGYIAGPKHFVAACNKIQS---------QF---TSG 334 (429)
Q Consensus 271 y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~----~G~R~G~v~~~~~~~~~l~~~~~---------~~---~~~ 334 (429)
+..-. . .+ ..++..+.+|++++++|+|+. .|.-+|.+...+++...+.++-. .. ..+
T Consensus 680 ~~~a~-~-----~l-~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~ 752 (954)
T PRK12566 680 NLNAQ-V-----GL-ARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAP 752 (954)
T ss_pred Chhhc-c-----CC-CChhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecc
Confidence 85211 0 11 111234667999999998852 24445665555555544443210 00 111
Q ss_pred Cch-HHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEE--EecCCccCCcccCCCCCC
Q 014172 335 ASS-ISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLF--IDFSTYYGSEAEGFGKIE 411 (429)
Q Consensus 335 ~~~-~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~--~~l~~~~~~~~~~~~~~~ 411 (429)
.+. ....++..++.. .+.+ +.+....-..+.+++.++|.+..++.+.++.+.+|-- +++..... ..+ .
T Consensus 753 ~gsa~~l~~A~~Yi~~--lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~~~~~~~~~~hEfii~~~~l~~--~~g----~ 823 (954)
T PRK12566 753 WGSASILPISWMYIAM--MGPQ-LADASEVAILSANYLANQLGGAFPVLYRGRNERVAHECILDLRPLKA--QTG----I 823 (954)
T ss_pred cchHHHHHHHHHHHHH--HCHH-HHHHHHHHHHHHHHHHHHhHhhCCCCcCCCCCCeeeEEEEEcccccc--ccC----C
Confidence 111 112233333332 1344 6566665567888999999774355553333332221 33321100 001 3
Q ss_pred ChHHHHHHHHHhCCee
Q 014172 412 NSESLCRYLLDKAQVL 427 (429)
Q Consensus 412 ~~~~~~~~Ll~~~gV~ 427 (429)
+..+++++|+ ++|+.
T Consensus 824 ~~~dvakRL~-d~Gih 838 (954)
T PRK12566 824 SEEDVAKRLM-DYGFH 838 (954)
T ss_pred CHHHHHHHHH-HCCcE
Confidence 6788999999 44764
No 349
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.43 E-value=8.8e-12 Score=119.28 Aligned_cols=237 Identities=19% Similarity=0.230 Sum_probs=166.9
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCC
Q 014172 132 AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRIS 211 (429)
Q Consensus 132 ~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~ 211 (429)
.|..++.+.+.+.++++.| .++.+++.-|- ......+.+++.||..|+..+..|.+....+++.|+.++.+..+
T Consensus 178 ~G~~~~hkelE~l~A~f~g---~e~a~vF~mGf-~TNs~~~p~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHN-- 251 (519)
T KOG1357|consen 178 AGTTEEHKELEELVARFLG---VEDAIVFSMGF-ATNSMNIPSLLGKGSLIISDELNHASLITGARLSGATTRVFRHN-- 251 (519)
T ss_pred cccHHHHHHHHHHHHHhcC---CcceEEEeccc-cccccCcceeecCCcceeeccccchheeccccccCceEEEEecC--
Confidence 4667777777777777766 56778888882 22344578899999999999999999999999999999998863
Q ss_pred CCCCCCHHHHHhhcc-------cCC-----cEEE-EcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCC
Q 014172 212 ENFLLDPKVLESKLT-------EKS-----RLLI-LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 278 (429)
Q Consensus 212 ~~~~~d~e~l~~~l~-------~~~-----~~i~-l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~ 278 (429)
|.+.||+.|+ +++ |.++ +..-...-|.+.. +.+++++++++ ...++.||+++-..-+.
T Consensus 252 -----dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~---Lp~vvalkkky-kayl~lDEAHSiGA~g~ 322 (519)
T KOG1357|consen 252 -----DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD---LPEVVALKKKY-KAYLYLDEAHSIGAMGA 322 (519)
T ss_pred -----CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecc---cHHHHHhhccc-cEEEEeeccccccccCC
Confidence 5566665553 222 3444 3444567788888 99999999999 99999999999654432
Q ss_pred CCCCccccC--CCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcc---cCCCchHHHHHHHHHHhc--CC
Q 014172 279 ATHTSFASL--PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF---TSGASSISQKAGVAALGL--GY 351 (429)
Q Consensus 279 ~~~~~~~~~--~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~---~~~~~~~~q~aa~~~l~~--~~ 351 (429)
.+ .....+ .+..+.+|.+++|.|++|..| ||+.+++++++.++...... ++.++...|... ..+.. +.
T Consensus 323 tG-rgvce~~g~d~~dvDImMGtftKSfga~G---Gyiagsk~lid~lrt~s~~~~yat~~sppvaqq~~-ssl~~i~G~ 397 (519)
T KOG1357|consen 323 TG-RGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGSKELIDYLRTPSPSALYATSLSPPVAQQIL-TSVKHIMGE 397 (519)
T ss_pred CC-cceeeccCCCchhheeecceehhhccccc---ceecCcHHHHhhhccCCCceeecccCChHHHHHHH-HHHHhhcCC
Confidence 11 122222 122466789999999999888 99999999999987543222 222344444433 33321 21
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCce
Q 014172 352 AGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGA 389 (429)
Q Consensus 352 ~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~ 389 (429)
...+..++..+++.+++.+++..|++. |+-+......
T Consensus 398 dgt~~g~~k~~~l~~ns~yfr~~l~~~-gfivyG~~dS 434 (519)
T KOG1357|consen 398 DGTNRGRQKIERLAENSRYFRWELQKM-GFIVYGNNDS 434 (519)
T ss_pred CcccHHHHHHHHHHhhhHHHHHhhhcC-cEEEecCCCC
Confidence 234556778888999999999999987 7777654444
No 350
>PRK06148 hypothetical protein; Provisional
Probab=99.43 E-value=7.9e-11 Score=129.70 Aligned_cols=314 Identities=12% Similarity=0.081 Sum_probs=181.8
Q ss_pred cCCCeEEcCCCCCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHH
Q 014172 93 AGVSVIRLAAGEPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 171 (429)
Q Consensus 93 ~g~~~i~L~~g~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~ 171 (429)
.|+..||+..|...++- +|.+.+++.+.+.+..... ....+....+|+.+.+.... ..+.+++++++++++..+
T Consensus 622 dG~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l~~~~---~~~~~~~~~lAe~L~~~~p~--~~~~v~f~nSGsEA~e~A 696 (1013)
T PRK06148 622 RGRAYLDCFNNVCHVGHAHPRVVAAAARQAARLNTNT---RYLHDAIVAYAERLTATLPD--GLTVAFFVNSGSEANSLA 696 (1013)
T ss_pred CCCEEEEcccChhhcCCCCHHHHHHHHHHHhhcCCcC---CcCCHHHHHHHHHHHHhCCC--CcCEEEEeCCcHHHHHHH
Confidence 47788999888655555 7999999999887531111 11234556666666654331 236899999999999999
Q ss_pred HHHhcC-CC-CEEEEcCCCCCChHHHHHH-cC------------CEEEEecCCC--CCCCCC-C-------HHHHHhhcc
Q 014172 172 VLAVCS-PG-DEVIIPAPFWVSYPEMARI-AD------------ATPVILPTRI--SENFLL-D-------PKVLESKLT 226 (429)
Q Consensus 172 l~~l~~-~g-d~Vlv~~p~y~~~~~~~~~-~g------------~~~~~v~~~~--~~~~~~-d-------~e~l~~~l~ 226 (429)
++.... .| ..|+...-+|.+....+.. .| ..+..++... ...|.. + .+.+++.+.
T Consensus 697 lklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~ 776 (1013)
T PRK06148 697 LRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIA 776 (1013)
T ss_pred HHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHH
Confidence 887642 23 6788888888875432221 11 0111111110 001110 1 134444442
Q ss_pred ------cCCcEEEEcCCCCCccC-CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEec
Q 014172 227 ------EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNG 299 (429)
Q Consensus 227 ------~~~~~i~l~~p~NPtG~-~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S 299 (429)
.++.+|++.....-.|. ..+++.+++|.++|++| |+++|.||++.+|...|.....+..+. ..--+.+
T Consensus 777 ~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~-g~llI~DEVqtGfGRtG~~~~a~e~~g----v~PDivt 851 (1013)
T PRK06148 777 AMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAA-GGVCIADEVQVGFGRVGSHWWAFETQG----VVPDIVT 851 (1013)
T ss_pred hhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHh-CCEEEEEecccCCCCCCCcchhhhhcC----CCcceee
Confidence 23555555444444454 55777899999999999 999999999988643332111111111 1112566
Q ss_pred cChhcccccceeeEEEcCHHHHHHHHHHh-hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc-
Q 014172 300 FSKAFAMTGWRLGYIAGPKHFVAACNKIQ-SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE- 377 (429)
Q Consensus 300 ~SK~~~~~G~R~G~v~~~~~~~~~l~~~~-~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~- 377 (429)
++|.+| .|..+|.+++.+++++.+..-. ...+++.++++.+++.+.|+. .++ +++.+..++.-+++.++|++
T Consensus 852 ~gK~lg-gG~Plgav~~~~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~---i~~--e~l~~~~~~~G~~l~~~L~~l 925 (1013)
T PRK06148 852 MGKPIG-NGHPMGAVVTTREIADSFDNGMEYFNTFGGNPVSCAIGLAVLDI---IED--EDLQRNALEIGNYLLAGLREL 925 (1013)
T ss_pred eccccc-CCcceEEEEEcHHHHhhccCCCccccCCCCCHHHHHHHHHHHHH---Hhh--ccHHHHHHHHHHHHHHHHHHH
Confidence 899999 8999999999999988875321 235666788888888888874 111 12333334444444444444
Q ss_pred ---CCCceeecCCceEEEEEecCCccCCcccCCCC-CCChHHHHHHHHHhCCeec
Q 014172 378 ---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK-IENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 378 ---l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~Ll~~~gV~v 428 (429)
.+-+.-+...| +++-+.+..... .... ......+++.|+++ ||.+
T Consensus 926 ~~~~~~i~~VrG~G-l~~gvel~~~~~----~~~~~~~~~~~i~~~~~~~-Gvl~ 974 (1013)
T PRK06148 926 QDRFDIIGDVRGMG-LFLGIELVTDRK----TKAPATAIARYVKNGARER-GILI 974 (1013)
T ss_pred HHhCCCceEEeeec-eEEEEEecCCcc----ccCccHHHHHHHHHHHHhC-CeEE
Confidence 33233334444 445555532100 0000 00135677777765 8876
No 351
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.42 E-value=3.8e-11 Score=120.24 Aligned_cols=235 Identities=19% Similarity=0.191 Sum_probs=153.6
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCC-
Q 014172 135 LELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISEN- 213 (429)
Q Consensus 135 ~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~- 213 (429)
.+..+.+|+.+ | .....++++|++.++..++++++.+||.||++.++|-+....+-++|+.++++.......
T Consensus 73 ~eAqe~aA~~f----g---Ad~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~ 145 (557)
T COG1982 73 KEAQELAARVF----G---ADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLY 145 (557)
T ss_pred HHHHHHHHHHh----C---CCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCccc
Confidence 45555555554 4 445789999999999999999999999999999999999999999999999987543221
Q ss_pred ---CCCCHHHHHhhccc--CC-cEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccc-cCCCCCCcccc
Q 014172 214 ---FLLDPKVLESKLTE--KS-RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII-YAPATHTSFAS 286 (429)
Q Consensus 214 ---~~~d~e~l~~~l~~--~~-~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~-~~~~~~~~~~~ 286 (429)
..++.+.+++.+.. .. |++++++|+. .|++++ +++|.+.+... ++|+..|+++.... +.+..+ .
T Consensus 146 gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~-~a~v~~deah~~~~~~~~~l~----~ 216 (557)
T COG1982 146 GIIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYN---LRKIVELLHHY-GAWVLYDEAHPAHFDFSPMLP----E 216 (557)
T ss_pred cccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeec---HHHHHHHHhhc-CceEEhhhcCcccccccccCc----c
Confidence 45799999887743 34 7888999877 899999 89999999999 99999999987531 111111 1
Q ss_pred CCCCCCceEEEeccChhcccccceeeEEEcCH--H-HHHHHHHHhhcccCCCchHHHHHHHHHHh--cCCCChHHHHHHH
Q 014172 287 LPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK--H-FVAACNKIQSQFTSGASSISQKAGVAALG--LGYAGGEVVSKMV 361 (429)
Q Consensus 287 ~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~--~-~~~~l~~~~~~~~~~~~~~~q~aa~~~l~--~~~~~~~~~~~~~ 361 (429)
.....+.++++.|.+|.++ +..-..++...+ . -.+++........++.+.....|.+.+-. .+..+++-.++..
T Consensus 217 ~~~~~~~~~~tqS~HK~l~-alSQaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~~G~~l~~~~~ 295 (557)
T COG1982 217 SALNGGADFVTQSTHKLLA-ALSQASMIHVKDGRAVNHERFNEALMMHQSTSPSYPLMASLDVARMQEGNAGRELWQEVI 295 (557)
T ss_pred hhhhcCceEEEechhhhhh-hhhhhHHHhhCCCccCCHHHHHHHHHHHccCCchHHHHHHHHHHHHhhhhhhHHHHHHHH
Confidence 1222577899999999985 333334444442 1 12334333333333333333333322211 1111122222334
Q ss_pred HHHHHHHHHHHHHhccCCCceeecC
Q 014172 362 KAFRERRDFLVKSFGELEGVKMSEP 386 (429)
Q Consensus 362 ~~~~~~r~~l~~~L~~l~g~~~~~p 386 (429)
+..-+.|+.+.+.+.+++++.+..|
T Consensus 296 ~~~i~~r~~~~~~~~~~~~~~~~~~ 320 (557)
T COG1982 296 DEAIDFRKALRRLINEIGFFPVLQP 320 (557)
T ss_pred HHHHHHHHHHHHHHHhcCCeeeccc
Confidence 4445566667777766656655433
No 352
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.42 E-value=2.3e-11 Score=119.77 Aligned_cols=273 Identities=16% Similarity=0.168 Sum_probs=174.8
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCC-----CCcEEEecChHHHHHHHHHHhcC--------
Q 014172 111 VLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYT-----PDQILVSNGAKQSILQAVLAVCS-------- 177 (429)
Q Consensus 111 ~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~-----~~~i~~t~G~~~al~~~l~~l~~-------- 177 (429)
..+.+.+...+......|...+...++++.+.+++.+.+|.+-. ...=++|+|+++++..++.+..+
T Consensus 54 ~i~~~~l~~~~n~n~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~ 133 (373)
T PF00282_consen 54 SILADLLASALNQNGFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKA 133 (373)
T ss_dssp HHHHHHHHHHHT-BTTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcccccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhh
Confidence 34455555566554555555556789999999999999997611 23568999999999877765421
Q ss_pred CC-----C-EEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc---C--Cc-EEEEcCCCCCccCCC
Q 014172 178 PG-----D-EVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE---K--SR-LLILCSPSNPTGSVY 245 (429)
Q Consensus 178 ~g-----d-~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~---~--~~-~i~l~~p~NPtG~~~ 245 (429)
.| . .|++++-+|.+...++..+|+.++.||+++ ++.+|+++|++.+.. + +- +|+.+.+...||.+=
T Consensus 134 ~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D 211 (373)
T PF00282_consen 134 KGVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAID 211 (373)
T ss_dssp HTTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-
T ss_pred cccccccccccccccccccHHHHhcceeeeEEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCccccccc
Confidence 12 2 577777799999999999999999999975 567999999998853 2 22 445577788899997
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCcccccC-CCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHH-HHHH
Q 014172 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA-PATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-FVAA 323 (429)
Q Consensus 246 ~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~-~~~~ 323 (429)
+ +++|.++|+++ ++|+.+|.+|++..+- +........+ ..-.=+..+++|.++ ....+|+++..++ ....
T Consensus 212 ~---l~~i~~i~~~~-~~wlHVDaA~gg~~~~~~~~~~~~~gi---~~adSit~d~HK~l~-~P~~~~~~l~r~~~~l~~ 283 (373)
T PF00282_consen 212 P---LEEIADICEKY-NIWLHVDAAYGGSALLSPEYRHLLFGI---ERADSITIDPHKWLG-VPYGCGVLLVRDKSDLRD 283 (373)
T ss_dssp S---HHHHHHHHHHC-T-EEEEEETTGGGGGGHCTTGGGGTTG---GGESEEEEETTTTTS--SSS-EEEEESSGGGHHG
T ss_pred C---HHHHhhhcccc-ceeeeeccccccccccccccccccccc---ccccccccchhhhhc-CCccceeEEeecccchHH
Confidence 7 99999999999 9999999999983321 1111111111 112235667899998 5578899887653 3332
Q ss_pred HH----HHhh-------------cccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeec-
Q 014172 324 CN----KIQS-------------QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE- 385 (429)
Q Consensus 324 l~----~~~~-------------~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~- 385 (429)
.. .+.. ..+...+. ...++...+.....+.+.+.++.++..+..+++.+.|++.+++++..
T Consensus 284 ~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~ 362 (373)
T PF00282_consen 284 AFSINADYLGNDDRESDESYDYGDYTLQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNE 362 (373)
T ss_dssp GGEEEETCTT-S-SSS-GGGCEEEGSSSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESST
T ss_pred HhccChhhhcccccccccccccccccccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcC
Confidence 11 0000 01112233 23333322222111467788888888899999999999998888864
Q ss_pred CCceEEEEEe
Q 014172 386 PQGAFYLFID 395 (429)
Q Consensus 386 p~~~~~~~~~ 395 (429)
|+-+. +.++
T Consensus 363 ~~~~~-vcFr 371 (373)
T PF00282_consen 363 PDLNI-VCFR 371 (373)
T ss_dssp TSSSE-EEEE
T ss_pred CCceE-EEEE
Confidence 55555 4443
No 353
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.41 E-value=3.6e-11 Score=118.35 Aligned_cols=278 Identities=13% Similarity=0.066 Sum_probs=163.2
Q ss_pred CChHHHHHHHHHHHHcC--CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEe-cChHHHHHHHHHHhcCCCCEEEE
Q 014172 108 DTPVLIAEAGINAIREG--FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVS-NGAKQSILQAVLAVCSPGDEVII 184 (429)
Q Consensus 108 ~~p~~v~~a~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t-~G~~~al~~~l~~l~~~gd~Vlv 184 (429)
..|+.+++++....... ...+++. ..++.+.+.+.+.+.++.+ +..+|+++ +|+|.+++.++..++.+ +.+++
T Consensus 13 ~~~~~v~~a~~~~~~~~~~~~hr~~~--f~~~~~~~r~~l~~l~~~~-~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i 88 (361)
T TIGR01366 13 KVRLEQLQALTTTAASLFGTSHRQAP--VKNLVGRVREGLAELFSLP-DGYEVILGNGGATAFWDAATFGLIEK-KSLHL 88 (361)
T ss_pred CCCHHHHHHHHhcCccccccCcCChH--HHHHHHHHHHHHHHHhCCC-CCceEEEECCchhHHHHHHHHhcccc-cccEE
Confidence 34788888876431110 1223221 2344444444444444531 23478886 55999999999998743 33334
Q ss_pred cCCCCCC-hHHHHHHc--CCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCC
Q 014172 185 PAPFWVS-YPEMARIA--DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP 261 (429)
Q Consensus 185 ~~p~y~~-~~~~~~~~--g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~ 261 (429)
..-.|.. +...+... +.++..++... +..++. .+.+++++|.+++..|.||.+.| +++| ++++
T Consensus 89 ~~G~~~~~~~~~a~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~lV~~~h~et~tG~~~p---i~~I---~~~~- 154 (361)
T TIGR01366 89 SFGEFSSKFAKAVKLAPWLGEPIIVTADP--GSAPEP-----QADPGVDVIAWAHNETSTGVAVP---VRRP---EGSD- 154 (361)
T ss_pred ecCHHHHHHHHHHHhhhccCCceEEecCC--CCCCCC-----ccCCCCCEEEEcccCCccceecc---cccc---cccC-
Confidence 3434432 23344442 23666666532 222332 35678999999999999999999 5555 5788
Q ss_pred CeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhh------------
Q 014172 262 RLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS------------ 329 (429)
Q Consensus 262 ~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~------------ 329 (429)
|+++|+|.+.+. +..+..+.. ..+++.|-.|.+|.+| .++++++++++++.+.....
T Consensus 155 g~~~iVDavqs~----g~~~idv~~------~D~~~~s~~K~lg~~~-Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~ 223 (361)
T TIGR01366 155 DALVVIDATSGA----GGLPVDIAE------TDVYYFAPQKNFASDG-GLWLAIMSPAALERIEAIAASGRWVPEFLSLP 223 (361)
T ss_pred CCeEEEEcCccc----cCCCCCHHH------CCEEEEEchhhcCCCC-ceEEEEECHHHHhhhhcccCCCCCCchhhhHH
Confidence 999999999876 333333322 3488999999998764 26666778877766542110
Q ss_pred ---------cccCCCchHHHHHHHHHHhcCCCChH-HHHHHHHHHHHHHHHHHHHhccCCCceeecC-C---ceEEEEEe
Q 014172 330 ---------QFTSGASSISQKAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSFGELEGVKMSEP-Q---GAFYLFID 395 (429)
Q Consensus 330 ---------~~~~~~~~~~q~aa~~~l~~~~~~~~-~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p-~---~~~~~~~~ 395 (429)
.+...++.....++.++++.- .+. .++...+++++..+++++.+.++++++.... . ......+.
T Consensus 224 ~~~~~~~~~~t~~tp~i~~i~~l~~al~~l--~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~ 301 (361)
T TIGR01366 224 TAVDNSLKNQTYNTPAIATLALLAEQIDWM--NGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTID 301 (361)
T ss_pred HHHhccccCCCCCCchHHHHHHHHHHHHHH--HHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEE
Confidence 111223333333445555530 012 3667778889999999999999855554421 1 11111223
Q ss_pred cCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 396 FSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 396 l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+++. .+..++...|.++ ||.+
T Consensus 302 ~~~g-----------~~~~~v~~~L~~~-gI~i 322 (361)
T TIGR01366 302 FVDD-----------IDAATVAKILRAN-GIVD 322 (361)
T ss_pred CCCc-----------cCHHHHHHHHHHC-CCee
Confidence 3321 2678888888554 8865
No 354
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.39 E-value=8.3e-13 Score=112.76 Aligned_cols=90 Identities=22% Similarity=0.406 Sum_probs=74.3
Q ss_pred eEEcCCCC---CCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcC--CCCCCCcEEEecChHHHHHHH
Q 014172 97 VIRLAAGE---PDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENG--LSYTPDQILVSNGAKQSILQA 171 (429)
Q Consensus 97 ~i~L~~g~---~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g--~~~~~~~i~~t~G~~~al~~~ 171 (429)
+|.+++|+ |++.+|+.+++++.+. ..|++..|.++||+++|+|+.+.+| +++++++|++|+|+++++..+
T Consensus 59 li~~~i~~~p~~d~~~~~~i~~~~~~~-----a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l 133 (153)
T PLN02994 59 LIEEWIEENPHADICTAEGTIDSFKDI-----ALFQDYHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEII 133 (153)
T ss_pred HHHHHHhCCCccccCCcHHHHHHHHHH-----hcCCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHH
Confidence 44444555 4555666556555552 3488889999999999999999988 678899999999999999999
Q ss_pred HHHhcCCCCEEEEcCCCCCC
Q 014172 172 VLAVCSPGDEVIIPAPFWVS 191 (429)
Q Consensus 172 l~~l~~~gd~Vlv~~p~y~~ 191 (429)
++++++|||.|++++|+|++
T Consensus 134 ~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 134 MFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred HHHHcCCCCEEEEeCCCCCC
Confidence 99999999999999999974
No 355
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.39 E-value=1.1e-11 Score=120.81 Aligned_cols=240 Identities=17% Similarity=0.162 Sum_probs=155.4
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.++|+..|. ..++- +|++.+++.+.+....... ......+...++++.+.+..+. ..++++++++++++++
T Consensus 14 dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~-~~~~~~~~~~~la~~L~~~~p~--~~~~v~f~~sGseAve 90 (339)
T PF00202_consen 14 DGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVS-FSGFTHPEAAELAEKLAELFPG--GLDRVFFANSGSEAVE 90 (339)
T ss_dssp TSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCS-TTTSEEHHHHHHHHHHHHHSST--TEEEEEEESSHHHHHH
T ss_pred CCCEEEECCCCccceecCCCccccchhHHHHhhhccccc-ccceeccchhhhhhhhhhcccc--ccceeeeccCchHHHH
Confidence 567789998665 34444 6899999999887632211 2333456777788887776632 3469999999999999
Q ss_pred HHHHHhc------C-CC-CEEEEcCCCCCChHHHHHHc-C------------CEEEEecCCCCCCCCCCHHH--------
Q 014172 170 QAVLAVC------S-PG-DEVIIPAPFWVSYPEMARIA-D------------ATPVILPTRISENFLLDPKV-------- 220 (429)
Q Consensus 170 ~~l~~l~------~-~g-d~Vlv~~p~y~~~~~~~~~~-g------------~~~~~v~~~~~~~~~~d~e~-------- 220 (429)
.+++... . +| ..|+...-+|.+....+... + ..+..+|.+ ++..
T Consensus 91 ~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~-------~~~~~~~~~~~~ 163 (339)
T PF00202_consen 91 AALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFP-------DPAADEEEQACL 163 (339)
T ss_dssp HHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETT-------CHHHHHHHHHHH
T ss_pred HHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCC-------ccchhhhHHHHH
Confidence 9998876 2 33 68998888888754322221 1 123455542 2222
Q ss_pred --HHhhc----ccCCcEEEEcCCCCCccCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCc
Q 014172 221 --LESKL----TEKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 293 (429)
Q Consensus 221 --l~~~l----~~~~~~i~l~~p~NPtG~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~ 293 (429)
+++.+ .++..+|++...+.-.|.. .+.+.+++|.++|++| |+++|.||++..+...|.. .......-..
T Consensus 164 ~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~-gillI~DEV~tG~gRtG~~-~a~~~~gv~P-- 239 (339)
T PF00202_consen 164 NALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREH-GILLIADEVQTGFGRTGKF-FASEHYGVDP-- 239 (339)
T ss_dssp HHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHT-T-EEEEEETTTTTTTTSSS-SGHHHHTSSS--
T ss_pred HHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehccccccc-ccceecccccccccccCCc-cceecccccC--
Confidence 22222 3355566664445445644 4677899999999999 9999999999987444432 1111221111
Q ss_pred eEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhc
Q 014172 294 TLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL 349 (429)
Q Consensus 294 ~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~ 349 (429)
++ -+|+|.++ .|..+|.+++++++.+.+.......+++.+.++..++.+.|+.
T Consensus 240 Di--v~~gK~l~-gG~p~sav~~~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~ 292 (339)
T PF00202_consen 240 DI--VTFGKGLG-GGLPISAVLGSEEIMEAFQPGSHGSTFGGNPLSCAAALATLEI 292 (339)
T ss_dssp SE--EEEEGGGG-TTSSEEEEEEEHHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHH
T ss_pred cc--cccccchh-hhhhcccccccchhhccccccccccccccchHhhhhhhhHHHh
Confidence 23 44689998 7899999999999988775544445666788888888888874
No 356
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.39 E-value=3.2e-10 Score=114.88 Aligned_cols=249 Identities=16% Similarity=0.105 Sum_probs=149.8
Q ss_pred hcCCCeEEcCCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCC-CcEEEecChHHH
Q 014172 92 QAGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTP-DQILVSNGAKQS 167 (429)
Q Consensus 92 ~~g~~~i~L~~g~~~--~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-~~i~~t~G~~~a 167 (429)
..|+.+||+..|... ++- +|++.+++.+.+.+.....+ ..-..+.+..+|+.+.+..+..... ..++++++++++
T Consensus 55 ~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~-~~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEA 133 (459)
T PRK06931 55 VEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHT-LDLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADA 133 (459)
T ss_pred CCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccccc-cccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHH
Confidence 357889999888633 343 78999999998865321111 1122466667777776554311011 234666899999
Q ss_pred HHHHHHHhc--CCCCEEEEcCCCCCChHHHHHHc-C------------CEEEEecCCCCCC--CC----CCHHHH----H
Q 014172 168 ILQAVLAVC--SPGDEVIIPAPFWVSYPEMARIA-D------------ATPVILPTRISEN--FL----LDPKVL----E 222 (429)
Q Consensus 168 l~~~l~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-g------------~~~~~v~~~~~~~--~~----~d~e~l----~ 222 (429)
.+.+++... .....|+...-+|.+....+... | ..+..+|...... +. -+.+.+ +
T Consensus 134 ve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (459)
T PRK06931 134 VEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFE 213 (459)
T ss_pred HHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHH
Confidence 998888753 22367888888888876554422 1 1122333221000 00 022322 2
Q ss_pred hhcc------cCCcEEEEcCCCCCccCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceE
Q 014172 223 SKLT------EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 295 (429)
Q Consensus 223 ~~l~------~~~~~i~l~~p~NPtG~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i 295 (429)
+.+. ++..+|++...+.-.|.+ .+.+.+++|.++|++| |+++|.||+..+|...|.. .....+.-..|
T Consensus 214 ~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~-g~LlI~DEV~tGfGRtG~~-~a~~~~gv~PD--- 288 (459)
T PRK06931 214 NFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKH-GILLIVDEVQAGFARTGKM-FAFEHAGIEPD--- 288 (459)
T ss_pred HHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEecchhcCCcCchH-HHhhhcCCCCC---
Confidence 2322 235566664444445654 5678899999999999 9999999999987433321 11111111112
Q ss_pred EEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhc
Q 014172 296 TVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL 349 (429)
Q Consensus 296 ~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~ 349 (429)
+-+++|.++ .|..+|.+++.+++ +.+.......+++.++++.+++.+.|+.
T Consensus 289 -ivt~gK~l~-gG~Pi~av~~~~~~-~~~~~~~~~~T~~gnpla~aaala~L~~ 339 (459)
T PRK06931 289 -IIVMSKAVG-GGLPLAVLGIKKEF-DAWQPGGHTGTFRGNQLAMATGLTTLKI 339 (459)
T ss_pred -EEEeccccc-CCcceeeeeeHHHH-hhccCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 556899998 78999988877663 5543333344666788888888888874
No 357
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.37 E-value=2.5e-10 Score=115.23 Aligned_cols=310 Identities=11% Similarity=0.076 Sum_probs=169.8
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHH--HHHHHHHcCCCCC-CCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAE--AGINAIREGFTRY-TPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~--a~~~~~~~~~~~Y-~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~ 166 (429)
.|+.+||+..|. ..++- +|++.+ ++.+.+.+-.... +...-..+....+++.+.+..+. -..+.|++++++++
T Consensus 43 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~p-~~~~~v~f~~SGsE 121 (443)
T PRK08297 43 TGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLGD-PELPHLFFVDGGAL 121 (443)
T ss_pred CCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcCC-CCCCEEEEeCchHH
Confidence 477889988775 33443 688888 8888875421111 01111223444466665544321 12369999999999
Q ss_pred HHHHHHHHhcC--------CC------CEEEEcCCCCCChHHHHHHc-CCEEE-----------EecCCC------CCCC
Q 014172 167 SILQAVLAVCS--------PG------DEVIIPAPFWVSYPEMARIA-DATPV-----------ILPTRI------SENF 214 (429)
Q Consensus 167 al~~~l~~l~~--------~g------d~Vlv~~p~y~~~~~~~~~~-g~~~~-----------~v~~~~------~~~~ 214 (429)
+++.+++.... .| .+|+...-+|.+....+... |.... .++... ..+.
T Consensus 122 Ave~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (443)
T PRK08297 122 AVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDL 201 (443)
T ss_pred HHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCccccc
Confidence 99999887621 12 56999998888866544432 21110 011000 0000
Q ss_pred -CC------CHHHHHhhcc---cCCcEEEEcCCCCCccCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCc
Q 014172 215 -LL------DPKVLESKLT---EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS 283 (429)
Q Consensus 215 -~~------d~e~l~~~l~---~~~~~i~l~~p~NPtG~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~ 283 (429)
.. +++.+++.+. +++.+|++...+.-.|.. .+++.+++|.++|++| |+++|.||++.+|...|.. ..
T Consensus 202 ~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~-g~llI~DEV~tGfGRtG~~-~a 279 (443)
T PRK08297 202 EEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEH-DALLIFDEVQTGVGLTGTA-WA 279 (443)
T ss_pred chhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhccCccchH-HH
Confidence 00 2345556664 355666664445445654 6778899999999999 9999999999886443321 11
Q ss_pred cccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHH-----HhhcccCCCchHHHHHHHHHHhcCCCChHHHH
Q 014172 284 FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK-----IQSQFTSGASSISQKAGVAALGLGYAGGEVVS 358 (429)
Q Consensus 284 ~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~-----~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~ 358 (429)
...+.-..| +-+|+|.++ +|.+++..++.+.... .....+++.+.++..++.+.|+.-. .++.++
T Consensus 280 ~~~~gv~PD----iv~~gK~l~-----~~a~l~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~-~~~l~~ 349 (443)
T PRK08297 280 YQQLGVRPD----IVAFGKKTQ-----VCGIMAGRRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIE-EDGLVE 349 (443)
T ss_pred HHhcCCCCC----EEEeccccc-----ccceecchHHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHH-hcCHHH
Confidence 111111112 335899975 2333344443222111 1133455678888888888887410 122233
Q ss_pred HHHHHHHHHHHHHHHHhccCCCce-eecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 359 KMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 359 ~~~~~~~~~r~~l~~~L~~l~g~~-~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+..+.-+..++.+.+..++.+.+- .+++.| .++.+.++.. .....+++.|+++ ||.+
T Consensus 350 ~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G-~~~~i~~~~~-----------~~~~~~~~~l~~~-Gvl~ 407 (443)
T PRK08297 350 NAARQGEYLLARLEELAAEFPAVVSNVRGRG-LMCAFDLPTT-----------ADRDEVIRRLWEE-GVLV 407 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcceeeeccc-eEEEEEecCH-----------HHHHHHHHHHHHC-CEEE
Confidence 333333333333333333344332 345555 4466777532 1356788888865 8875
No 358
>PLN02452 phosphoserine transaminase
Probab=99.37 E-value=2.2e-10 Score=112.37 Aligned_cols=290 Identities=13% Similarity=0.151 Sum_probs=186.2
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHc----C-----CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIRE----G-----FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~----~-----~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~ 166 (429)
..++|+.|-. ..|++|++++.+.+.+ + ..+.+ .-..++.+.+.+.+.+.++.+-+.+-++++.|++.
T Consensus 7 ~~~~f~pGP~--~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs--~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~ 82 (365)
T PLN02452 7 RVFNFSAGPA--TLPANVLAKAQAELYNWEGSGMSVMEMSHRG--KEFLSIIQKAEADLRELLDIPDNYEVLFLQGGAST 82 (365)
T ss_pred ceEeeeCCCC--CCCHHHHHHHHHHHhcccccCccccccCCCc--hHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHH
Confidence 3567766643 3588999998877532 0 11222 22356777777888888884322234566678999
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCCC--hHHHHHHcCCEEEEecCCCC-CCCCCCHHHHHhhcccCCcEEEEcCCCCCccC
Q 014172 167 SILQAVLAVCSPGDEVIIPAPFWVS--YPEMARIADATPVILPTRIS-ENFLLDPKVLESKLTEKSRLLILCSPSNPTGS 243 (429)
Q Consensus 167 al~~~l~~l~~~gd~Vlv~~p~y~~--~~~~~~~~g~~~~~v~~~~~-~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~ 243 (429)
++.+++..++.+||++++..-...+ +.+.++.+|...+....... ....+++++++. .++.+.|.+++-.-.||+
T Consensus 83 ~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~hnETstGv 160 (365)
T PLN02452 83 QFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEWEL--TPDAKFVHICANETIHGV 160 (365)
T ss_pred HHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHcCC--CCCCcEEEECCCCCCCcE
Confidence 9999999999999988877755444 34667778874444422111 112467776532 346778888877778999
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHH
Q 014172 244 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA 323 (429)
Q Consensus 244 ~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~ 323 (429)
.++. ++++. ++++|+|.+... +..+..+..+ + +.+.|..|.+|.+| +|++++++++++.
T Consensus 161 ~~~~--~~~i~-------~~~lvVDa~Ss~----g~~pidv~~~----~--v~~~saqK~lGP~G--l~~v~vr~~~l~~ 219 (365)
T PLN02452 161 EFKD--YPDVG-------NVPLVADMSSNF----LSKPVDVSKY----G--VIYAGAQKNVGPSG--VTIVIIRKDLIGN 219 (365)
T ss_pred ecCc--ccccC-------CCeEEEECCccc----cCcccCHHHc----C--EEEEecccccCCCC--eEEEEEcHHHHhh
Confidence 6331 43332 478899999875 2233333322 2 34469999999888 7999999888766
Q ss_pred HHHH------------hhcccCCCchHHHHHHHHHHhcCCCCh-H-HHHHHHHHHHHHHHHHHHHhccCCCcee--ecC-
Q 014172 324 CNKI------------QSQFTSGASSISQKAGVAALGLGYAGG-E-VVSKMVKAFRERRDFLVKSFGELEGVKM--SEP- 386 (429)
Q Consensus 324 l~~~------------~~~~~~~~~~~~q~aa~~~l~~~~~~~-~-~~~~~~~~~~~~r~~l~~~L~~l~g~~~--~~p- 386 (429)
+... ...+..+++....+++..+|+. .. + .++.+.++++++.+++++.|++.+|+.. ..+
T Consensus 220 ~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~---l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~ 296 (365)
T PLN02452 220 ARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFED---LLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKS 296 (365)
T ss_pred cccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHH---HHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChH
Confidence 4321 0111235677777777777764 22 2 4888999999999999999998777611 111
Q ss_pred -CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCee
Q 014172 387 -QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVL 427 (429)
Q Consensus 387 -~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~ 427 (429)
.+.+-+.+.++.. ....+|.+.+.++ |+.
T Consensus 297 ~rs~~~vsF~~~~~-----------~~~~~f~~~~~~~-g~~ 326 (365)
T PLN02452 297 VRSLMNVPFTLGGS-----------ELEAEFVKEAAKA-GMV 326 (365)
T ss_pred HhCCeEEEEEcCCc-----------hhHHHHHHHHHHC-CCc
Confidence 3556677777653 2466777777655 654
No 359
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.36 E-value=1.5e-10 Score=109.04 Aligned_cols=177 Identities=18% Similarity=0.242 Sum_probs=117.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCcEEEe---cChHHHHHHHHHHhcCCCCEEEEc-CCCCCChHHHH----------HHcCC
Q 014172 136 ELRSAICHKLKEENGLSYTPDQILVS---NGAKQSILQAVLAVCSPGDEVIIP-APFWVSYPEMA----------RIADA 201 (429)
Q Consensus 136 ~lr~~ia~~l~~~~g~~~~~~~i~~t---~G~~~al~~~l~~l~~~gd~Vlv~-~p~y~~~~~~~----------~~~g~ 201 (429)
.=|+.+.+.+.+.+| .+..++- .++|.+|..++..+++|||+++.. -.-|....+.+ +..|.
T Consensus 54 ~GRd~le~iyA~vfg----aE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi 129 (403)
T PF06838_consen 54 IGRDKLERIYADVFG----AEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGI 129 (403)
T ss_dssp HHHHHHHHHHHHHCT-----SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-
T ss_pred ccHHHHHHHHHHHhC----chhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCc
Confidence 456666666666666 2333433 379999999999999999998854 45577777665 45678
Q ss_pred EEEEecCCCCCCCCCCHHHHHhhcccCCcEEEE-cCCCCCccCCCCHHHHHHHHHHHHh-CCCeEEEEccCCcccccCCC
Q 014172 202 TPVILPTRISENFLLDPKVLESKLTEKSRLLIL-CSPSNPTGSVYPKNLLDEIARIVAK-HPRLLVLSDEIYEHIIYAPA 279 (429)
Q Consensus 202 ~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l-~~p~NPtG~~~~~~~l~~I~~~a~~-~~~i~vi~Deay~~~~~~~~ 279 (429)
+...+++.++ ..+|++.+++++++++|+++| =+-..-+=..++.++++++++++++ +|++++++|.+|++|+-.
T Consensus 130 ~Y~~v~L~~d--g~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~-- 205 (403)
T PF06838_consen 130 KYREVPLTED--GTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVET-- 205 (403)
T ss_dssp EEEE--B-TT--SSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSS--
T ss_pred eeEEEeecCC--CCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccc--
Confidence 9999998754 459999999999999999998 3444445566788899999998886 479999999999997632
Q ss_pred CCCccccCCCCCCceEEEeccChhcccccc--eeeEEEcCHHHHHHHHHH
Q 014172 280 THTSFASLPGMWERTLTVNGFSKAFAMTGW--RLGYIAGPKHFVAACNKI 327 (429)
Q Consensus 280 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~--R~G~v~~~~~~~~~l~~~ 327 (429)
..+.- .+..++.+|+-|..| .|+ --||+++.+++++.+...
T Consensus 206 ~EP~~------vGADl~aGSLIKNpG-GgiAptGGYIaGr~~lVe~~a~R 248 (403)
T PF06838_consen 206 QEPTE------VGADLMAGSLIKNPG-GGIAPTGGYIAGRKDLVERAAYR 248 (403)
T ss_dssp S-GGG------GT-SEEEEETTSGGG-TTT-SS-EEEEESHHHHHHHHHH
T ss_pred cCccc------cchhheeccceeCCC-CCccCcCCEEechHHHHHHHHhh
Confidence 22221 245599999999987 443 359999999999987654
No 360
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.34 E-value=1.4e-10 Score=113.84 Aligned_cols=279 Identities=12% Similarity=0.057 Sum_probs=175.0
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhc-CCCCEEEEcCCCCCC
Q 014172 113 IAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC-SPGDEVIIPAPFWVS 191 (429)
Q Consensus 113 v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~-~~gd~Vlv~~p~y~~ 191 (429)
+.+++.+.+-. ..++++ ...++.+.+.+.+.+.++.+-+.+-++++.|+|.++++++..++ ++||.|++.. .|..
T Consensus 19 ~~~~~~~~~~~-~~HRs~--~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~ 94 (374)
T TIGR01365 19 SIEELKNAPLG-RSHRSK--LGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGK 94 (374)
T ss_pred hHHHHhhhhcc-cCcCCH--HHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHH
Confidence 55555544322 123333 34677777788888888843222335678889999999999999 5899988865 4443
Q ss_pred h-H-HHHHHcCC-EEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEc
Q 014172 192 Y-P-EMARIADA-TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 268 (429)
Q Consensus 192 ~-~-~~~~~~g~-~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~D 268 (429)
- . ++++..|+ ++..+... -+..+|+++++. . +.|++++---.||+..+ +++|+.. .+ +.++|+|
T Consensus 95 r~~~eia~~~g~~~v~~l~~~--~g~~~~~~~ve~--~---~~v~~vhnETSTGv~np---v~~i~~~--~~-~~lliVD 161 (374)
T TIGR01365 95 GWVTDVTKQLKLPDVRVLEAE--YGKLPDLKKVDF--K---NDVVFTWNGTTSGVRVP---NGDFIPA--DR-EGLTICD 161 (374)
T ss_pred HHHHHHHHhcCCCCcEEEcCC--CCCCCCHHHcCC--C---CCEEEecCCCchheecc---ccccccc--cC-CCcEEEE
Confidence 3 4 78888999 47777653 344589999973 1 23567777778999999 5544432 25 7899999
Q ss_pred cCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHh--------------------
Q 014172 269 EIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ-------------------- 328 (429)
Q Consensus 269 eay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~-------------------- 328 (429)
.+-+.. + .+..+. +-.+++.|-.|.++.|+ .+++++.+++.++......
T Consensus 162 avSs~g---~-~~l~~d------~iDv~~tgsQK~L~~pp-Gls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~ 230 (374)
T TIGR01365 162 ATSAAF---A-QDLDYH------KLDVVTFSWQKVLGGEG-AHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKK 230 (374)
T ss_pred ccchhc---C-CCCChh------HCcEEEEechhccCCCC-ceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhh
Confidence 987752 1 222221 24588999999998543 4788888888776655211
Q ss_pred ---hcccCCCchHHHHHHHHHHhcCCCChH-HHHHHHHHHHHHHHHHHHHhccCCC-ceeecC----CceEEEEEecCCc
Q 014172 329 ---SQFTSGASSISQKAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSFGELEG-VKMSEP----QGAFYLFIDFSTY 399 (429)
Q Consensus 329 ---~~~~~~~~~~~q~aa~~~l~~~~~~~~-~~~~~~~~~~~~r~~l~~~L~~l~g-~~~~~p----~~~~~~~~~l~~~ 399 (429)
..+...++.....++..+|+. ..++ .++++.++++++.+.+++.++++ | +.+... .+...+.+.++..
T Consensus 231 ~~~~~t~~TP~v~~l~a~~~~l~~--i~~egGle~~~~Rh~~~a~~l~~~l~~l-g~l~~~~~~~~~rS~tvt~v~~~~~ 307 (374)
T TIGR01365 231 IFEGSTINTPSMLCVEDWLDALKW--AESIGGLKPLIARADDNLAVLEAFVAKN-NWIHFLAETPEIRSNTSVCLKVVDP 307 (374)
T ss_pred hhcCCCCCChHHHHHHHHHHHHHH--HHHccCHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCChhhcCCCeEEEEeCCc
Confidence 112223344444555555542 0122 58899999999999999999999 6 666542 2333344555431
Q ss_pred cCCcccCCCCCCC-----hHHHHHHHHHhCCeec
Q 014172 400 YGSEAEGFGKIEN-----SESLCRYLLDKAQVLL 428 (429)
Q Consensus 400 ~~~~~~~~~~~~~-----~~~~~~~Ll~~~gV~v 428 (429)
+..+ ..++ ..+|.+.|.++ ||.+
T Consensus 308 -~~~~----~~~~~~~~~~~~~~~~l~~~-gi~i 335 (374)
T TIGR01365 308 -AIDA----LDEDAQADFAKELISTLEKE-GVAY 335 (374)
T ss_pred -cccc----cccchhhHHHHHHHHHHHHC-CEEE
Confidence 0000 0002 46777776655 8865
No 361
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.32 E-value=5.8e-10 Score=106.08 Aligned_cols=274 Identities=12% Similarity=0.066 Sum_probs=180.5
Q ss_pred cCCCeEEcCCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCCC--CHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHH
Q 014172 93 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAG--TLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (429)
Q Consensus 93 ~g~~~i~L~~g~~~--~~~-p~~v~~a~~~~~~~~~~~Y~~~~G--~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~a 167 (429)
.|+..||+..+... ++. .|++.+++.+......+-..+..- .-++.+.+.+.+ +- -..+.|++++++|+|
T Consensus 54 ~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~~t~eav~l~~~l~~~~----~~-~~~~rvff~nsGTeA 128 (433)
T KOG1401|consen 54 DGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGYFTLEAVELEEVLSAVL----GK-GSAERVFFCNSGTEA 128 (433)
T ss_pred CcceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCccccHHHHHHHHHHHhcc----cC-CCccEEEEecCCcHH
Confidence 46778998888732 222 688999988876553111111111 123333333332 21 167899999999999
Q ss_pred HHHHHHHhcCC------CC--EEEEcCCCCCChH-HHHHHcCCEEEEecCCC---CC--CCCCCHHHHHhhcccCC---c
Q 014172 168 ILQAVLAVCSP------GD--EVIIPAPFWVSYP-EMARIADATPVILPTRI---SE--NFLLDPKVLESKLTEKS---R 230 (429)
Q Consensus 168 l~~~l~~l~~~------gd--~Vlv~~p~y~~~~-~~~~~~g~~~~~v~~~~---~~--~~~~d~e~l~~~l~~~~---~ 230 (429)
+..++..-.+- -+ .++....+|.+-. .++...+-.....|.++ +- ..--|.+.+++.++.+. .
T Consensus 129 ne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~Ia 208 (433)
T KOG1401|consen 129 NETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIA 208 (433)
T ss_pred HHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCceE
Confidence 99988875321 12 3888888777644 33333333333333211 10 00017899999987643 6
Q ss_pred EEEEcCCCCCccCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccc
Q 014172 231 LLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGW 309 (429)
Q Consensus 231 ~i~l~~p~NPtG~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~ 309 (429)
+|++.-.+--.|.. .++|.+..|.+.|+++ ++++|.||+..+|...|.. +....+...+| +.++.|.++ .|+
T Consensus 209 AVIvEPiqGaGG~~p~~peFl~~L~k~C~~~-~vl~I~DEV~tG~gR~g~~-~a~e~~~~~PD----I~t~aK~L~-gGl 281 (433)
T KOG1401|consen 209 AVIVEPIQGAGGIIPADPEFLIGLRKECDDN-GVLLIFDEVQTGLGRLGYG-WAQEYFGVTPD----ITTVAKPLG-GGL 281 (433)
T ss_pred EEEEecccCCCCcccCCHHHHHHHHHHHhhc-CceEEeehhhhCccccchH-HHHHHhCcCCc----ceeehhhcc-CCc
Confidence 66665556556644 4677899999999999 9999999999986544321 11111111112 677999999 999
Q ss_pred eeeEEEcCHHHHHHHHHHhh---cccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC
Q 014172 310 RLGYIAGPKHFVAACNKIQS---QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE 379 (429)
Q Consensus 310 R~G~v~~~~~~~~~l~~~~~---~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~ 379 (429)
.+|..++++++.+.+..-.. ..+++.++++..++...++.-. ..++++++.+.-+..|+.+.+.+.+-+
T Consensus 282 PigA~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~-~~e~~k~vs~~~k~L~~~l~e~~~~~~ 353 (433)
T KOG1401|consen 282 PIGATGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELK-DPETLKNVSKIGKELRKLLDEYLKKTP 353 (433)
T ss_pred eeEEEeehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 99999999999999875433 5566778888888888887533 368888888888999999999988753
No 362
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.31 E-value=7.5e-10 Score=119.65 Aligned_cols=299 Identities=13% Similarity=0.185 Sum_probs=179.2
Q ss_pred HHHHHHHHHHhcCCCeEE-cCCCCCCCCChHHHHHHHHHHHH--cCCCCCCCC--CCCH----HHHHHHHHHHHhhcCCC
Q 014172 82 AITDQATALAQAGVSVIR-LAAGEPDFDTPVLIAEAGINAIR--EGFTRYTPN--AGTL----ELRSAICHKLKEENGLS 152 (429)
Q Consensus 82 ~~~~~~~~~~~~g~~~i~-L~~g~~~~~~p~~v~~a~~~~~~--~~~~~Y~~~--~G~~----~lr~~ia~~l~~~~g~~ 152 (429)
++.+..+++...+....+ ++.|.-+.-+|+.+.+++.+... ..++.|.+. +|.. +++..||+++ |
T Consensus 89 e~~~~~~~la~kN~~~~~fiG~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~Lt----G-- 162 (993)
T PLN02414 89 QMLEHMKSLASKNKVFKSYIGMGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLT----G-- 162 (993)
T ss_pred HHHHHHHHHHhcCCccccccCCCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHh----C--
Confidence 444555555444432222 33444334457777777776443 223444443 4543 4555555554 5
Q ss_pred CCCCcEEEecChHHHHHHHHHHh-cCCC--CEEEEcCCCCCChHHHH----HHcCCEEEEecCCCCCCCCCCHHHHHhhc
Q 014172 153 YTPDQILVSNGAKQSILQAVLAV-CSPG--DEVIIPAPFWVSYPEMA----RIADATPVILPTRISENFLLDPKVLESKL 225 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l-~~~g--d~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~d~e~l~~~l 225 (429)
.+++++.++.|+|.+.+.+++++ +.+| |+|++++-.|+.+...+ +..|++++.++.... + ..
T Consensus 163 ~~~anaSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~-----~------~~ 231 (993)
T PLN02414 163 LPMSNASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF-----D------YS 231 (993)
T ss_pred CChhhEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh-----c------cc
Confidence 57889999999999999887776 3544 78999999999887555 456999999986321 1 11
Q ss_pred ccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhc-
Q 014172 226 TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF- 304 (429)
Q Consensus 226 ~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~- 304 (429)
.+.+-.+++..|++ +|.+.+ +++|+++|+++ |+++++ .+... ... .+.. ++..+.+|++++..|..
T Consensus 232 ~~~v~~vlvq~P~~-~G~v~d---v~~I~~~ah~~-GaL~iV-aad~l-al~-----~l~~-pge~GADi~vgsgqKwg~ 298 (993)
T PLN02414 232 SGDVCGVLVQYPAT-DGEVLD---YAEFVKNAHAN-GVKVVM-ATDLL-ALT-----MLKP-PGEWGADIVVGSAQRFGV 298 (993)
T ss_pred cCceEEEEEecCCC-CeEEcC---HHHHHHHHHHc-CCEEEE-EECHH-Hhc-----CCCC-HhhccCcEEEECCCcccc
Confidence 12233444445544 999998 99999999999 899998 33322 011 1111 22346668999998886
Q ss_pred --ccccceeeEEEcCHHHHHHHH-HHhh---------c-------------ccCCCchH----HHHHHHHHHhcCCCChH
Q 014172 305 --AMTGWRLGYIAGPKHFVAACN-KIQS---------Q-------------FTSGASSI----SQKAGVAALGLGYAGGE 355 (429)
Q Consensus 305 --~~~G~R~G~v~~~~~~~~~l~-~~~~---------~-------------~~~~~~~~----~q~aa~~~l~~~~~~~~ 355 (429)
|..|.+.|++.+.+++.+.+- ++.. . ...+.+.+ +..+++++......+..
T Consensus 299 P~G~GGP~aGflavr~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~ 378 (993)
T PLN02414 299 PMGYGGPHAAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPE 378 (993)
T ss_pred CCCCCCCCeeEEEECHHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccc
Confidence 335677999999887755331 0000 0 00112222 22223322211000235
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEE--EEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 356 VVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY--LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 356 ~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.++++.++..++..++.++|.+. |+++..+ .+| +.++++ +..++.++|.++ ||.+
T Consensus 379 Gl~~Ia~ri~~la~~l~~~L~~~-G~~~~~~--~~f~~vt~~~~--------------~~~~v~~~L~~~-gI~l 435 (993)
T PLN02414 379 GLKTIAQRVHGLAGVFAAGLKKL-GFQVQSL--PFFDTVKVKCS--------------DADAIADAAAKV-GINL 435 (993)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhc-CCccCCC--CCcCeEEEecC--------------CHHHHHHHHHHC-CCee
Confidence 57788888888999999999876 7776533 233 233443 457888888766 7654
No 363
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.30 E-value=3.1e-10 Score=114.39 Aligned_cols=306 Identities=11% Similarity=0.037 Sum_probs=167.3
Q ss_pred hcCCCeEEcCCCCCC--CCC-hHHHHHHHHHH-HHcCCCCCCCCCCCHHHHHHHHHHHH----hhcCCCCCCCcEEEecC
Q 014172 92 QAGVSVIRLAAGEPD--FDT-PVLIAEAGINA-IREGFTRYTPNAGTLELRSAICHKLK----EENGLSYTPDQILVSNG 163 (429)
Q Consensus 92 ~~g~~~i~L~~g~~~--~~~-p~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~~ia~~l~----~~~g~~~~~~~i~~t~G 163 (429)
..|+..||+..|... ++- +|.+.+++.+. ........ +... ......+++++. +... -..+.|+++++
T Consensus 55 ~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~-~~~~-~~~~~~la~~l~~~l~~~~p--~~~~~v~f~~S 130 (464)
T TIGR00699 55 VDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINR-PALG-NFPSKDWAKILKEGILKVAP--KGQDQVWTGMS 130 (464)
T ss_pred CCCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhccc-ccCC-cHHHHHHHHHHHHhHHhhCC--CCcCEEEEeCC
Confidence 357889999988743 333 78999999874 23221111 1111 223344555443 2222 12368999999
Q ss_pred hHHHHHHHHHHhcC--------------------------CC---CEEEEcCCCCCChHHHHHHc-CCE-----------
Q 014172 164 AKQSILQAVLAVCS--------------------------PG---DEVIIPAPFWVSYPEMARIA-DAT----------- 202 (429)
Q Consensus 164 ~~~al~~~l~~l~~--------------------------~g---d~Vlv~~p~y~~~~~~~~~~-g~~----------- 202 (429)
++++++.+++.... +| ..|+....+|.+....+... |-.
T Consensus 131 GsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~ 210 (464)
T TIGR00699 131 GSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFD 210 (464)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCC
Confidence 99999999887621 11 26999998888765443322 211
Q ss_pred EEEecCCCC-CCC-----------CCCHHHHHhhcc---cCCcEEEEcCCCCCccCCC-CHHHHHHHHHHHHhCCCeEEE
Q 014172 203 PVILPTRIS-ENF-----------LLDPKVLESKLT---EKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVL 266 (429)
Q Consensus 203 ~~~v~~~~~-~~~-----------~~d~e~l~~~l~---~~~~~i~l~~p~NPtG~~~-~~~~l~~I~~~a~~~~~i~vi 266 (429)
...+|.... ..+ .-+++.+++.+. .++.+|++.......|.+. +.+.+++|.++|++| |+++|
T Consensus 211 ~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~-g~lLI 289 (464)
T TIGR00699 211 WPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKH-NVAFI 289 (464)
T ss_pred ceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEE
Confidence 111222100 000 013556677764 2456666655566678766 678899999999999 99999
Q ss_pred EccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHH
Q 014172 267 SDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAA 346 (429)
Q Consensus 267 ~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~ 346 (429)
.||++.++...|.. .....+.-...-+ +.+|+|.++ .| |+++..+ .+..........+++.++++..++.+.
T Consensus 290 ~DEV~tGfGrtG~~-fa~e~~gv~~~PD--i~t~gK~lg-~g---G~~~~~~-~~~~~~~~~~~~T~~gnp~~~aaa~a~ 361 (464)
T TIGR00699 290 VDEVQTGVGATGKF-WAHEHWNLDDPPD--MVTFSKKFQ-TA---GYFFHDP-AFRPNKPYRQFNTWMGDPSRALILREI 361 (464)
T ss_pred EeeeeeCCCCCcch-hHHHhcCCCCCCC--EEEehhhhc-cC---Cccccch-hccCCCCcccccCCCCCHHHHHHHHHH
Confidence 99999876443321 1111111100011 466899996 33 4444432 111101112234556777788888777
Q ss_pred HhcCCCChHHHHHHHHHHHHHHHHHHHHhcc----CC-Cceeec--CCceEEEEEecCCccCCcccCCCCCCChHHHHHH
Q 014172 347 LGLGYAGGEVVSKMVKAFRERRDFLVKSFGE----LE-GVKMSE--PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRY 419 (429)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----l~-g~~~~~--p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 419 (429)
|+. .++ +++.+..++.-+++.+.|++ +| -+.-++ .. |+++-+.++.. .....+.+.
T Consensus 362 L~~---l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~-Glm~gie~~~~-----------~~~~~i~~~ 424 (464)
T TIGR00699 362 IQE---IKR--KDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGR-GTFIAWDTPDE-----------AKRDKLLKK 424 (464)
T ss_pred HHH---HHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCe-EEEEEEecCCH-----------HHHHHHHHH
Confidence 764 111 12233333333344444433 43 233333 33 45466676531 125678888
Q ss_pred HHHhCCeec
Q 014172 420 LLDKAQVLL 428 (429)
Q Consensus 420 Ll~~~gV~v 428 (429)
|+++ ||.+
T Consensus 425 ~~~~-Gvl~ 432 (464)
T TIGR00699 425 ARNN-GVNI 432 (464)
T ss_pred HHHC-CcEE
Confidence 8876 8875
No 364
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.30 E-value=9.7e-10 Score=119.22 Aligned_cols=302 Identities=16% Similarity=0.169 Sum_probs=183.6
Q ss_pred HHHHHHHHHHhcCCCe-EEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCC-----CCCHHHHHHHHHHHHhhcCCCCCC
Q 014172 82 AITDQATALAQAGVSV-IRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPN-----AGTLELRSAICHKLKEENGLSYTP 155 (429)
Q Consensus 82 ~~~~~~~~~~~~g~~~-i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~-----~G~~~lr~~ia~~l~~~~g~~~~~ 155 (429)
++.+..+++.+..... ..++.|.-+.-.|+.+.+.+.+.-. -++.|+|- +|..+..-.....+.+..| .+.
T Consensus 62 e~~~~~~~la~~N~~~~~~ig~G~y~~~~P~vi~~~i~~~~~-~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG--~~~ 138 (954)
T PRK05367 62 EALAELRAIASKNKVFRSYIGQGYYGTHTPPVILRNILENPA-WYTAYTPYQPEISQGRLEALLNFQTMVADLTG--LEI 138 (954)
T ss_pred HHHHHHHHHHhcCCCCCcccCCCCCCCcCcHHHHHHHHhCcc-hhhccCCCChHHHHHHHHHHHHHHHHHHHHHC--CCh
Confidence 4444555555444321 2345555343346666565554211 13556653 4655544444444444456 577
Q ss_pred CcEEEecChHHHHHHHHHHh-cCC--CCEEEEcCCCCCChHHH----HHHcCCEEEEecCCCCCCCCCCHHHHHhhcccC
Q 014172 156 DQILVSNGAKQSILQAVLAV-CSP--GDEVIIPAPFWVSYPEM----ARIADATPVILPTRISENFLLDPKVLESKLTEK 228 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l-~~~--gd~Vlv~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~ 228 (429)
.|+.+..++|++.+.+++++ ..+ +|+|++++-.|+.+... ++..|++++.++.+. + ++ .++
T Consensus 139 anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~--d--~~--------~~~ 206 (954)
T PRK05367 139 ANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK--A--LD--------HDD 206 (954)
T ss_pred hhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc--C--CC--------ccc
Confidence 89999999999999888776 344 48999999999987754 456899999998642 1 11 224
Q ss_pred CcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhc---c
Q 014172 229 SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF---A 305 (429)
Q Consensus 229 ~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~---~ 305 (429)
+.++++.+| |-+|.+.+ +++|+++|+++ |+++++|.....+.. ...++..+-+|++++..|.. |
T Consensus 207 ~~~vlvq~p-~~~G~i~d---~~~i~~~ah~~-Gal~~vda~~~Al~~--------l~~pge~GaDi~vgs~qkfg~P~g 273 (954)
T PRK05367 207 VFGVLLQYP-GTSGEVRD---YTALIAAAHAR-GALVAVAADLLALTL--------LTPPGEMGADIAVGSAQRFGVPMG 273 (954)
T ss_pred EEEEEEecC-CCCeeecc---HHHHHHHHHHc-CCEEEEEehhhhccC--------CCChhhcCCCEEEeeCcccCCCCC
Confidence 445556666 45999998 99999999999 999999875432211 11123356679999999871 2
Q ss_pred cccceeeEEEcCHHHHHHHHH-Hhh----------------------cccCCCchH----HHHHHHHHHhcCCCChHHHH
Q 014172 306 MTGWRLGYIAGPKHFVAACNK-IQS----------------------QFTSGASSI----SQKAGVAALGLGYAGGEVVS 358 (429)
Q Consensus 306 ~~G~R~G~v~~~~~~~~~l~~-~~~----------------------~~~~~~~~~----~q~aa~~~l~~~~~~~~~~~ 358 (429)
..|...|++.+.+++.+.+.. +.. ....+.+.+ +..++.+.+-........++
T Consensus 274 ~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~ 353 (954)
T PRK05367 274 FGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLK 353 (954)
T ss_pred CCCCCEEEEEECHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHH
Confidence 345559999998887665420 000 000011111 11122222100000356688
Q ss_pred HHHHHHHHHHHHHHHHhccCCCceeecCCceEE--EEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 359 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY--LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 359 ~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++.++...+..++.++|++. |+++..+ .+| +.++++ .+..++.++|+++ ||.+
T Consensus 354 ~Ia~~~~~la~~l~~~L~~~-G~~~~~~--~~f~~~~~~~~-------------~~~~~i~~~l~~~-gi~~ 408 (954)
T PRK05367 354 AIARRVHRLAAILAAGLRAL-GLEVVHD--SFFDTLTVEVG-------------GDAAAVLARALAA-GINL 408 (954)
T ss_pred HHHHHHHHHHHHHHHHHHhc-CcccCCC--CCCCeEEEeCC-------------CCHHHHHHHHHHC-Ccee
Confidence 88888899999999999874 8776533 232 223332 2678999999876 7654
No 365
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.29 E-value=8.2e-10 Score=111.28 Aligned_cols=311 Identities=11% Similarity=0.089 Sum_probs=168.7
Q ss_pred cCCCeEEcCCCCCC--CCC-hHHHH--HHHHHHHHcCCCC-CCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHH
Q 014172 93 AGVSVIRLAAGEPD--FDT-PVLIA--EAGINAIREGFTR-YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (429)
Q Consensus 93 ~g~~~i~L~~g~~~--~~~-p~~v~--~a~~~~~~~~~~~-Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~ 166 (429)
.|+..||+..|... ++- +|.+. +++.+.+.+.... .+...-..+....+++.+.+..+. -..+.+++++++++
T Consensus 36 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~v~f~~sGsE 114 (431)
T TIGR03251 36 DGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVLGD-PALPHLFFIEGGAL 114 (431)
T ss_pred CCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHhcCC-CCcCEEEEeCCcHH
Confidence 47788888777633 333 67888 8888887653211 111111233334455555443211 13368999999999
Q ss_pred HHHHHHHHhcC--------C------CCEEEEcCCCCCChHHHHHH-cCCEEE---EecC--------C----C--CCCC
Q 014172 167 SILQAVLAVCS--------P------GDEVIIPAPFWVSYPEMARI-ADATPV---ILPT--------R----I--SENF 214 (429)
Q Consensus 167 al~~~l~~l~~--------~------gd~Vlv~~p~y~~~~~~~~~-~g~~~~---~v~~--------~----~--~~~~ 214 (429)
+++.+++.... . +.+|+...-+|.+....+.. .|.... ..|. . + ....
T Consensus 115 Ave~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 194 (431)
T TIGR03251 115 AVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNL 194 (431)
T ss_pred HHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCcccccc
Confidence 99999887631 1 36799999888876544332 221100 0110 0 0 0000
Q ss_pred C-------CCHHHHHhhcc---cCCcEEEEcCCCCCccCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCc
Q 014172 215 L-------LDPKVLESKLT---EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS 283 (429)
Q Consensus 215 ~-------~d~e~l~~~l~---~~~~~i~l~~p~NPtG~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~ 283 (429)
. -+++.+++.+. +++.++++...+.-.|.. .+++.+++|.++|++| |+++|.||++.++...|.. ..
T Consensus 195 ~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEV~tG~GrtG~~-~a 272 (431)
T TIGR03251 195 DQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEH-DALLIFDEVQTGVGLTGTA-WA 272 (431)
T ss_pred chhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHc-CCEEEEecchhccCccchH-HH
Confidence 0 12344555553 456677775556666765 5777899999999999 9999999999976444321 11
Q ss_pred cccCCCCCCceEEEeccChhcccccceeeEEEcCH--HHHHHHHH--HhhcccCCCchHHHHHHHHHHhcCCCChHHHHH
Q 014172 284 FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK--HFVAACNK--IQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 359 (429)
Q Consensus 284 ~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~--~~~~~l~~--~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~ 359 (429)
+..+.-..| ++ +++|.+. . .|++...+ ++...... .....+++.+.++.+++.+.|+.-. .+..+++
T Consensus 273 ~~~~gv~PD--i~--~~gK~~~-~---~g~~~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~-~~~l~~~ 343 (431)
T TIGR03251 273 YQQLGVQPD--IV--AFGKKTQ-V---CGIMAGRRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIE-EERLVDN 343 (431)
T ss_pred HHhcCCCCC--EE--EecccCc-c---ceEEecchHHHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHH-hcCHHHH
Confidence 111111112 33 4889862 2 25554443 22221111 1123445567888888888887410 0112233
Q ss_pred HHHHHHHHHHHHHHHhccCCCc-eeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 360 MVKAFRERRDFLVKSFGELEGV-KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 360 ~~~~~~~~r~~l~~~L~~l~g~-~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
..+.-+..++.+.+..++.+++ ..++.. |.++.+.++.. .....+++.|+++ ||.+
T Consensus 344 ~~~~g~~l~~~L~~l~~~~~~~i~~vrg~-G~~~~i~~~~~-----------~~~~~~~~~l~~~-Gvl~ 400 (431)
T TIGR03251 344 ARVQGAHLLARLHELAAEFPHLVSNPRGR-GLMCAFDLPST-----------ADRDEVIRQLYRE-GVLL 400 (431)
T ss_pred HHHHHHHHHHHHHHHHHhCccceeccccc-ceeEEEEeCCH-----------HHHHHHHHHHHhC-CeEE
Confidence 3444444444444433334422 223444 44466777532 1245788888865 8875
No 366
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.29 E-value=5.9e-10 Score=104.09 Aligned_cols=322 Identities=16% Similarity=0.200 Sum_probs=205.7
Q ss_pred HHHHHHHhcCCCeEEcCCCCCCCCC-----hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEE
Q 014172 85 DQATALAQAGVSVIRLAAGEPDFDT-----PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQIL 159 (429)
Q Consensus 85 ~~~~~~~~~g~~~i~L~~g~~~~~~-----p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~ 159 (429)
.+-+.+++.|.+..-|.+++-.... ...+.+....++-.+.-.|+.+.+...|..++.+.+ |. +.++
T Consensus 27 ~RE~al~~ag~N~F~l~Sedv~IDLLTDSGTgams~~qwaamm~GDEAYagsrs~~~L~~avkdif----Gf----q~~i 98 (471)
T COG3033 27 YREEALKKAGYNPFLLDSEDVFIDLLTDSGTGAMTDKQWAAMMRGDEAYAGSRSYYALADAVKDIF----GF----QYTI 98 (471)
T ss_pred HHHHHHHHcCCCeeeccccceEEEeeccCCcccccHHHHHHHhccchhhcccccHHHHHHHHHHhc----Cc----eeee
Confidence 3445566677777777666632111 123445555555566778999999999999998886 32 5678
Q ss_pred EecChHHHHHHHHHHhcCCCC-----EEEE-cCCCCCChHHHHHHcCCEEEEecCCCCC--------CCCCCHHHHHhhc
Q 014172 160 VSNGAKQSILQAVLAVCSPGD-----EVII-PAPFWVSYPEMARIADATPVILPTRISE--------NFLLDPKVLESKL 225 (429)
Q Consensus 160 ~t~G~~~al~~~l~~l~~~gd-----~Vlv-~~p~y~~~~~~~~~~g~~~~~v~~~~~~--------~~~~d~e~l~~~l 225 (429)
.|.-+..+-+.++..++++|+ ..++ ++-.|.......+..|+.++.++++... .+.+|++.|++.|
T Consensus 99 PthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~li 178 (471)
T COG3033 99 PTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLI 178 (471)
T ss_pred eccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcCCccccccccccccccccCCCCCccCHHHHHHHH
Confidence 888777777777777766553 3333 3445556777888899998888765422 1458999999998
Q ss_pred cc----CCcEEEEc-CCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccC-Cccccc------CCCCCCccccCCCC---
Q 014172 226 TE----KSRLLILC-SPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI-YEHIIY------APATHTSFASLPGM--- 290 (429)
Q Consensus 226 ~~----~~~~i~l~-~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Dea-y~~~~~------~~~~~~~~~~~~~~--- 290 (429)
++ +.-.|+++ +.|.-.|...+.+.++++.++|++| ++.++.|.+ |.+-.| .+...+++..+...
T Consensus 179 devG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky-~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~s 257 (471)
T COG3033 179 DEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKY-DIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYS 257 (471)
T ss_pred HHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHc-CCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHh
Confidence 74 45556553 4455788999999999999999999 999999987 444333 12334455443110
Q ss_pred CCceEEEeccChhcccccceeeEEEcCHH----HHHHHHHHh-----hcccCCCchHHHHHHHHHHhcCCCChHHHHHHH
Q 014172 291 WERTLTVNGFSKAFAMTGWRLGYIAGPKH----FVAACNKIQ-----SQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 361 (429)
Q Consensus 291 ~~~~i~~~S~SK~~~~~G~R~G~v~~~~~----~~~~l~~~~-----~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~ 361 (429)
+. .-...|.-|- |+.-+ .|++...++ +...++... .....+.+.-...+.+.-|.++. ..+|++...
T Consensus 258 Ya-D~~~mS~KKD-~lvnm-GGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~-~~~yl~~Rv 333 (471)
T COG3033 258 YA-DGCTMSAKKD-GLVNM-GGFLCFKDDSFFDVYEECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGV-NFDYLAHRV 333 (471)
T ss_pred hh-hhheeecccc-ceecc-ccEEEecCccHHHHHHHHHhheEeeccccccCcccchhHHHHHHHHHHhc-CcHHHHHHH
Confidence 00 0122333332 22211 167766654 455554332 12233345555555555555432 256666555
Q ss_pred HHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccC-CcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 362 KAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG-SEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 362 ~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
. ..++|.+.|++. |+.+..|.||.-+|++...... ..++.| .++.|+-.|..++||-.
T Consensus 334 ~----Qv~YL~~~l~~~-GVpi~~paGGHavfvda~~~lphip~eqF----paqala~ely~e~GiRa 392 (471)
T COG3033 334 A----QVQYLADGLEEA-GVPIVQPAGGHAVFVDAGKFLPHIPAEQF----PAQALACELYKEAGIRA 392 (471)
T ss_pred H----HHHHHHHHHHhc-CCeeEecCCCceEEeehhhhcCCCChhhC----cHHHHHHHHHHHhCeee
Confidence 4 345777888887 9999999999999998765433 234555 68899999999999864
No 367
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.28 E-value=2e-10 Score=108.33 Aligned_cols=304 Identities=20% Similarity=0.268 Sum_probs=198.6
Q ss_pred cCCCeEEcCCCC-CCCCChHHHHHHHHHHHHcC-C------CCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecCh
Q 014172 93 AGVSVIRLAAGE-PDFDTPVLIAEAGINAIREG-F------TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGA 164 (429)
Q Consensus 93 ~g~~~i~L~~g~-~~~~~p~~v~~a~~~~~~~~-~------~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~ 164 (429)
.|++++||++.+ ..+...+++.+.....+++- . .-|+...-..+|.+.||++++ .++.|+.+.|.
T Consensus 92 ~G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G-------~E~aivYs~gF 164 (467)
T KOG1358|consen 92 DGKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMG-------TEDAIVYSYGF 164 (467)
T ss_pred cCceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhC-------Ccceeeecccc
Confidence 577899998776 66666788888888877652 1 225444445678888888874 56788888887
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccC-------------CcE
Q 014172 165 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEK-------------SRL 231 (429)
Q Consensus 165 ~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~-------------~~~ 231 (429)
+. +..++.++++.||.|.+.+-........+++..-.++.+..+ |.++++..+.+. .+.
T Consensus 165 ~t-i~S~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhn-------dm~~lerll~E~~~~~~K~~k~~~~Rrf 236 (467)
T KOG1358|consen 165 ST-IESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKHN-------DMEDLERLLPEQEDEDQKNPKKALTRRF 236 (467)
T ss_pred ch-hhhcchhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecCC-------CHHHHHHhccCcchhhhhccccccceEE
Confidence 65 666899999999999999988778888888888888888743 666666655321 234
Q ss_pred EEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCC--CCCCccccCCCCCCceEEEeccChhcccccc
Q 014172 232 LILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP--ATHTSFASLPGMWERTLTVNGFSKAFAMTGW 309 (429)
Q Consensus 232 i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~--~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~ 309 (429)
|++..-.-+||...+ +.+|+++..+| ...||.||.|+..+.+. .+-......+ ..+..++++|+.-+++..|
T Consensus 237 iv~EGl~~N~g~i~p---l~~iv~lk~Ky-k~RvildEs~SfG~lg~~GrGvteH~~v~-~~~iDiv~~sm~~alas~G- 310 (467)
T KOG1358|consen 237 IVVEGLYANTGDICP---LPEIVKLKNKY-KFRVILDESLSFGVLGKTGRGVTEHFGVP-ITDIDIVTASMETALASGG- 310 (467)
T ss_pred EEEEeeccCCCcccc---cHHHHHHHhhh-eEEEEEecccccccccccCccccccCCCC-ccceeeeeecccccccccC-
Confidence 555555667999999 99999999999 99999999999766543 2222222222 2456689999998888666
Q ss_pred eeeEEEcCHHHHH--HHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeec-C
Q 014172 310 RLGYIAGPKHFVA--ACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-P 386 (429)
Q Consensus 310 R~G~v~~~~~~~~--~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~-p 386 (429)
||.++..-+++ ++......+..+.++....++..++.. .+|-.++.+.++.....+.+.|+...++.+.. +
T Consensus 311 --gFc~G~~~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i----~~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~ 384 (467)
T KOG1358|consen 311 --GFCAGKSFIADHQRLSGSGYCFSASLPPYLAGAAIKAILI----EEWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSP 384 (467)
T ss_pred --ceeecceeeEeeeeccccceeeeccCchhhhhhHHHHHHH----HhhCcchhhhhhccccccchhhhcCCceEEecCc
Confidence 88887443322 222222222333455555555556653 45555566666766677777887765677764 4
Q ss_pred CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 387 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+.+ +.+.+....+.+... ..--++++++++.+ |+++
T Consensus 385 ~SPi-~hl~l~~~~~s~e~e---~~lL~eivd~~i~~-~~ll 421 (467)
T KOG1358|consen 385 ESPI-IHLQLERSYGSREKE---EKLLEEIVDKCIAE-GVLL 421 (467)
T ss_pred CCce-eeeeecccccchHHH---HHHHHHHHHHHHhh-ccee
Confidence 4444 556665432211000 00124666777766 6654
No 368
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.24 E-value=3.8e-09 Score=112.77 Aligned_cols=319 Identities=13% Similarity=0.094 Sum_probs=181.1
Q ss_pred CeEEcCCCC--CCCC--ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHH
Q 014172 96 SVIRLAAGE--PDFD--TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 171 (429)
Q Consensus 96 ~~i~L~~g~--~~~~--~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~ 171 (429)
..+|...|. ..+. .++++.+++.+++.+-. .+....-..+-...+|+.|.+..+.+ ..++|+++++|+++++.+
T Consensus 366 ~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~-hv~~~~~~hepa~~LAe~L~~~~~~~-~l~rVffs~sGSeAvE~A 443 (817)
T PLN02974 366 QQFDACASWWTQGPDPTLQPELARAVAYAAGRYG-HVMFPENVHEPALRAAELLLGGPGKG-WASRVFFSDNGSTAIEVA 443 (817)
T ss_pred eEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCC-ccccCccCCHHHHHHHHHHHhccCCC-CCCEEEECCchHHHHHHH
Confidence 577777664 3344 37899999999887622 22111123456666777776532200 135899999999999988
Q ss_pred HHHhcC-----C----------------CCEEEEcCCCCCChHHHHHHcCCE---------------EEEecCC------
Q 014172 172 VLAVCS-----P----------------GDEVIIPAPFWVSYPEMARIADAT---------------PVILPTR------ 209 (429)
Q Consensus 172 l~~l~~-----~----------------gd~Vlv~~p~y~~~~~~~~~~g~~---------------~~~v~~~------ 209 (429)
++...+ . ..+||....+|++-...+..++.. ...++..
T Consensus 444 lKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~ 523 (817)
T PLN02974 444 LKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRN 523 (817)
T ss_pred HHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCcccccc
Confidence 876521 1 235888888888644332222210 0011100
Q ss_pred -------CCC----------CCC-----CC------------HHHHHhhcc--------cCCcEEEEcCC-CCCccCCC-
Q 014172 210 -------ISE----------NFL-----LD------------PKVLESKLT--------EKSRLLILCSP-SNPTGSVY- 245 (429)
Q Consensus 210 -------~~~----------~~~-----~d------------~e~l~~~l~--------~~~~~i~l~~p-~NPtG~~~- 245 (429)
+.+ .|. .| .+.+++.+. ++..+|++.-. +.-.|.++
T Consensus 524 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~ 603 (817)
T PLN02974 524 GRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLI 603 (817)
T ss_pred ccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccC
Confidence 000 000 00 244565553 13444444332 56667765
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccccc-ceeeEEEcCHHHHHHH
Q 014172 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAAC 324 (429)
Q Consensus 246 ~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~R~G~v~~~~~~~~~l 324 (429)
+++.+++|.++|++| |+++|.||++.+|...|... ....+.-..| +-+++|.++ .| +.+|.+++++++.+.+
T Consensus 604 ~~~yl~~lr~lc~~~-gilLI~DEV~TGfGRtG~~f-a~e~~gv~PD----Ii~~gKgLt-gG~~Plaa~l~~~~I~~~f 676 (817)
T PLN02974 604 DPLFQRALVQVCRSR-KIPVIFDEVFTGLWRLGVES-AWELLGCKPD----IACYAKLLT-GGLVPLAATLATEEVFEAF 676 (817)
T ss_pred CHHHHHHHHHHHHHh-CCEEEEeecccCCCcccchh-hHHhcCCCCC----EEeeccccc-CCCCccEEEEEcHHHHHhh
Confidence 677899999999999 99999999999875444321 1111111111 556999998 88 6999999999999988
Q ss_pred HH------HhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHH----HHhccCCCceeecCCceEEEEE
Q 014172 325 NK------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLV----KSFGELEGVKMSEPQGAFYLFI 394 (429)
Q Consensus 325 ~~------~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~----~~L~~l~g~~~~~p~~~~~~~~ 394 (429)
.. .....+++.++++.+++.+.|+.-. .++...++.+.-++..+++. +.|++.|.+.-++..|-| +-+
T Consensus 677 ~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~-~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~-~~i 754 (817)
T PLN02974 677 RGPSKLDALLHGHSYTAHPMGCAAAAKALQWYK-DPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTV-LAL 754 (817)
T ss_pred ccccccCCcccCCCCCcCHHHHHHHHHHHHHHH-cccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeE-EEE
Confidence 52 1234566788999999988887511 12222333333333333333 344445555545555544 556
Q ss_pred ecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 395 DFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 395 ~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+..... .+++ ...-...+.+.++.+.||.+
T Consensus 755 el~~~~~--~~~~-~~~~a~~v~~~~~~~~Gl~~ 785 (817)
T PLN02974 755 ELDAEGS--GSGY-SSLYARSVVRRLRREDGIYA 785 (817)
T ss_pred EEecCCc--cccc-chHHHHHHHHHHHHhCCEEE
Confidence 6532100 0111 00124567777773458864
No 369
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.24 E-value=4.7e-09 Score=100.97 Aligned_cols=230 Identities=19% Similarity=0.164 Sum_probs=157.5
Q ss_pred EEcCCCCCCCCChHHHHHHHHHHHHcCC-CCCCCCCCCH--HHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHH
Q 014172 98 IRLAAGEPDFDTPVLIAEAGINAIREGF-TRYTPNAGTL--ELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (429)
Q Consensus 98 i~L~~g~~~~~~p~~v~~a~~~~~~~~~-~~Y~~~~G~~--~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 174 (429)
.+-+.|.+.+ .+++++++........ ..|.-..|.. .++ .+++.+ .+. ...+.++++++.+.++.+++.+
T Consensus 30 ~~t~lG~s~~--~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~-~~~~~~---~~~-~~aea~~ivnnn~aAVll~~~a 102 (395)
T COG1921 30 LMTNLGRSLY--SPEAIEAMKEAMRAPVELETDLKTGKRGARLT-ELAELL---CGL-TGAEAAAIVNNNAAAVLLTLNA 102 (395)
T ss_pred eeccCCCccC--CHHHHHHHHHHhcccceeeeecccchhhHHHH-HHHHHH---hcc-cchhheeeECCcHHHHHHHHhh
Confidence 3334455443 5788888888776531 2443333332 233 333333 232 2357899999999999999998
Q ss_pred hcCCCCEEE-----EcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEE-cCCCCCccCCCCHH
Q 014172 175 VCSPGDEVI-----IPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLIL-CSPSNPTGSVYPKN 248 (429)
Q Consensus 175 l~~~gd~Vl-----v~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l-~~p~NPtG~~~~~~ 248 (429)
+.+++..|+ ++ +..+...+.++..|++++.+.... .....+++.+|++++++++- .+.|.+.=...+
T Consensus 103 l~~~~EvVis~g~lV~-gg~~~v~d~~~~aG~~l~EvG~tn----~t~~~d~~~AIne~ta~llkV~s~~~~f~~~l~-- 175 (395)
T COG1921 103 LAEGKEVVVSRGELVE-GGAFRVPDIIRLAGAKLVEVGTTN----RTHLKDYELAINENTALLLKVHSSNYGFTGMLS-- 175 (395)
T ss_pred hccCCeEEEEcccccc-CCCCChhHHHHHcCCEEEEecccC----cCCHHHHHHHhccCCeeEEEEeecccccccccc--
Confidence 887544443 33 577889999999999999998532 25889999999999998874 444432223335
Q ss_pred HHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHh
Q 014172 249 LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ 328 (429)
Q Consensus 249 ~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~ 328 (429)
.++++++|++| ++.+|+|.+-+..+-. .+.+..... .+..++++|-.|.+| |.+.|.+++.+++++.+++..
T Consensus 176 -~~~l~~ia~~~-~lpvivD~aSg~~v~~---e~~l~~~la-~GaDLV~~SgdKllg--GPqaGii~GkKelI~~lq~~~ 247 (395)
T COG1921 176 -EEELVEIAHEK-GLPVIVDLASGALVDK---EPDLREALA-LGADLVSFSGDKLLG--GPQAGIIVGKKELIEKLQSHP 247 (395)
T ss_pred -HHHHHHHHHHc-CCCEEEecCCcccccc---ccchhHHHh-cCCCEEEEecchhcC--CCccceEechHHHHHHHHhhh
Confidence 78899999999 9999999998765431 122222222 355699999999985 889999999999999988765
Q ss_pred hcccCCCchHHHHHHHHHHhc
Q 014172 329 SQFTSGASSISQKAGVAALGL 349 (429)
Q Consensus 329 ~~~~~~~~~~~q~aa~~~l~~ 349 (429)
-....-......++..++|+.
T Consensus 248 l~Ralrv~K~tla~l~~aLe~ 268 (395)
T COG1921 248 LKRALRVDKETLAALEAALEL 268 (395)
T ss_pred hhhhhhcCcHhHHHHHHHHHH
Confidence 444444566666666676664
No 370
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.24 E-value=5e-09 Score=103.06 Aligned_cols=318 Identities=14% Similarity=0.101 Sum_probs=177.4
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCC-CCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTR-YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~-Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
.|+.+||--+|. ..++- .+++.+++.+.+.+-.+. .....+.+ -..+|+.|.+..+. -+-++|++++|+++++
T Consensus 42 ~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~P--a~~LA~~L~~~aP~-~~l~~vFf~~sGSeAv 118 (449)
T COG0161 42 DGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTHEP--AIELAEKLAELAPE-GGLDHVFFTDSGSEAV 118 (449)
T ss_pred CCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhcccCCch--HHHHHHHHHHhCCC-CCccEEEEeCCchHHH
Confidence 466677766665 22333 688999999988762111 11112223 44455555544331 1246999999999999
Q ss_pred HHHHHHhc-------CCC-CEEEEcCCCCCChHHHHHH-cC-------------CEEEEecCCC--C----CCCC----C
Q 014172 169 LQAVLAVC-------SPG-DEVIIPAPFWVSYPEMARI-AD-------------ATPVILPTRI--S----ENFL----L 216 (429)
Q Consensus 169 ~~~l~~l~-------~~g-d~Vlv~~p~y~~~~~~~~~-~g-------------~~~~~v~~~~--~----~~~~----~ 216 (429)
+.+++... +|. ..++.-..+|.+-...+.. .| ..+..+|... . +.+. -
T Consensus 119 EtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~ 198 (449)
T COG0161 119 ETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAE 198 (449)
T ss_pred HHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHH
Confidence 99988753 232 3488778888764322222 22 1122222211 0 1111 1
Q ss_pred CHHHHHhhccc---CCcEEEEcCC-C-CCccCCCCH-HHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCC
Q 014172 217 DPKVLESKLTE---KSRLLILCSP-S-NPTGSVYPK-NLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM 290 (429)
Q Consensus 217 d~e~l~~~l~~---~~~~i~l~~p-~-NPtG~~~~~-~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~ 290 (429)
..++|++.+.. .+-+.+|.-| . --+|+.+++ ..|+++.++|++| |+++|.||+-.+|-..|.. +..-.
T Consensus 199 ~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky-~ILlI~DEV~tGFGRTG~~---FA~e~-- 272 (449)
T COG0161 199 AADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKY-GILLIADEVATGFGRTGKM---FACEH-- 272 (449)
T ss_pred HHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHc-CcEEEeecceeCCCcCchh---hhhhh--
Confidence 25566666643 4444455555 3 347766554 4799999999999 9999999998886544432 21110
Q ss_pred CCceEEEeccChhcccccceeeEEEcCHHHHHHHHHH-----hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 014172 291 WERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI-----QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFR 365 (429)
Q Consensus 291 ~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~-----~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~ 365 (429)
++..--+-+++|.+.-.=+.+|.+++.+++.+.+..- ....+++.++++.+++++.|+.-. .+.++++.+
T Consensus 273 ~gi~PDi~~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e-~e~l~~~~~---- 347 (449)
T COG0161 273 AGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILE-EEDLLERVA---- 347 (449)
T ss_pred cCCCCCeeeecccccccchhhHhHhhhHHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHH-hcCHHHHHH----
Confidence 1111125568999873447788888899998888653 233466678888888888887511 133344444
Q ss_pred HHHHHHHHHhcc----CCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 366 ERRDFLVKSFGE----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 366 ~~r~~l~~~L~~----l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.-.++.+.|++ .|.+.=++..| +..-+++-..... ...| ...-...+...++++ ||.+
T Consensus 348 ~~~~~l~~~L~~~l~~~p~VgdVR~~G-li~~iElv~d~~t-~~~f-~~~~~~~~~~~~~e~-Gl~i 410 (449)
T COG0161 348 EIGAYLQAGLQAALADHPLVGDVRGLG-LIGAIELVADKAT-KTPF-EARVGARVRAAALER-GLLI 410 (449)
T ss_pred HHHHHHHHHHHHhcccCCcEEEeeccc-eEEEEEEeccccc-ccch-hhhHHHHHHHHHHHC-CeEE
Confidence 444444444444 33343334444 3344555321110 0000 001245666666666 8765
No 371
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.23 E-value=3.8e-09 Score=97.66 Aligned_cols=295 Identities=15% Similarity=0.153 Sum_probs=190.1
Q ss_pred cCCCeEEcCCCCCCCCChHHHHHHHHHH---HHcC----CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChH
Q 014172 93 AGVSVIRLAAGEPDFDTPVLIAEAGINA---IREG----FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAK 165 (429)
Q Consensus 93 ~g~~~i~L~~g~~~~~~p~~v~~a~~~~---~~~~----~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~ 165 (429)
...++|.|..|.....++....+....+ ..++ +++ ......++-+.+..++...-| ..+.+|+++.+++
T Consensus 28 lp~~viyLdgnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~--a~~~W~~lp~~lgdklApLiG--A~~~Evvv~dtts 103 (407)
T COG3844 28 LPGGVIYLDGNSLGARPRAVTARLQQVATDEWGEGLIRSWNK--AKADWFDLPERLGDKLAPLIG--ARAGEVVVTDTTS 103 (407)
T ss_pred CCCCeEEeeccccccCchHHHHHHHHHHHHHHHhhhhhhhcc--cCCchhhchhHHHHHhhhhhc--CCCCceEEeCCcc
Confidence 3457999998886655443333333322 2221 222 123445666677777766666 4678999999999
Q ss_pred HHHHHHHHHhcC--CCCEEEEcCC-CCCChH----HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCC
Q 014172 166 QSILQAVLAVCS--PGDEVIIPAP-FWVSYP----EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPS 238 (429)
Q Consensus 166 ~al~~~l~~l~~--~gd~Vlv~~p-~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~ 238 (429)
-.++.++.+.++ +|+.|++++- +|++-. ..+...|.. +++ ...+.++++++++++++.+|++++.+
T Consensus 104 ~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~---~~~----~~~~~P~~~~~~~~dd~AvV~L~~V~ 176 (407)
T COG3844 104 INLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG---YDL----EGVIAPRALEEAITDDVAVVLLSHVN 176 (407)
T ss_pred hHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc---ccc----eeeeChHHHHHhhccceEEEEecccc
Confidence 999988888764 4888888764 455433 334444433 111 12357889999999999999999999
Q ss_pred CCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcc-cccceeeEEEcC
Q 014172 239 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYIAGP 317 (429)
Q Consensus 239 NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~R~G~v~~~ 317 (429)
.-||..++ +.+|-+++++| +++++.|-+|+.... +.. +. .++..+-|++-.|.++ -||.. +++.+.
T Consensus 177 y~TGql~d---m~aiT~~AH~~-galv~wDLAHsaGav----p~~---Lh-~~gaDfaigcsyKYLNgGPGap-a~l~v~ 243 (407)
T COG3844 177 YKTGQLLD---MRAITALAHQH-GALVGWDLAHSAGAV----PVD---LH-AAGADFAIGCSYKYLNGGPGAP-AGLFVA 243 (407)
T ss_pred ccccceee---HHHHHHHHHhc-CceEEeehhcccCCc----cee---ec-ccCCCeeeeeeceeccCCCCCc-eeEEec
Confidence 99999999 99999999999 899999999986322 212 22 2466688999999984 24443 444444
Q ss_pred HHHHHHHHH-----------------------HhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHH
Q 014172 318 KHFVAACNK-----------------------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKS 374 (429)
Q Consensus 318 ~~~~~~l~~-----------------------~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~ 374 (429)
++..+.... ..+.....++.++..+...+|+... .-.+.+++++--...+++.+.
T Consensus 244 ~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa--~~~i~~lR~kSlaLTd~fieL 321 (407)
T COG3844 244 PRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFA--DVDITELRKKSLALTDYFIEL 321 (407)
T ss_pred cccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhh--hcCHHHHHHhhhHHHHHHHHH
Confidence 333332211 1111223345555555556665421 222677888877888888888
Q ss_pred hccC-C--CceeecCCc----eEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 375 FGEL-E--GVKMSEPQG----AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 375 L~~l-~--g~~~~~p~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++.. + ++++..|.. |-.+.+..| ...++++.|+++ ||..
T Consensus 322 vEa~~~~~~l~l~tPr~~~~rGsqvS~~hp--------------~~~~V~qaLi~r-GVig 367 (407)
T COG3844 322 VEARCEYYGLTLVTPRAHEERGSQVSLYHP--------------HGYQVMQALIDR-GVIG 367 (407)
T ss_pred HHhccccCCcEEeccchhhhccceeeEecC--------------cHHHHHHHHHHc-Cccc
Confidence 8763 3 577765543 233555554 578999999887 8763
No 372
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.21 E-value=5.4e-09 Score=101.72 Aligned_cols=288 Identities=10% Similarity=0.077 Sum_probs=181.0
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHc--C-------CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcE-EEecChHH
Q 014172 97 VIRLAAGEPDFDTPVLIAEAGINAIRE--G-------FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQI-LVSNGAKQ 166 (429)
Q Consensus 97 ~i~L~~g~~~~~~p~~v~~a~~~~~~~--~-------~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i-~~t~G~~~ 166 (429)
.++|+.|-.. .|++|++++.+.+.+ + ..+.++ -..++.+.+.+.+++.++++-+ .+| +++.|++.
T Consensus 5 ~~nF~aGPa~--lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~--~F~~i~~~~~~~Lr~Ll~~P~~-y~Vlfl~GggT~ 79 (364)
T PRK12462 5 QLNFSGGPGA--LPDTVLEQVRQAVVELPETGLSVLGMSHRSS--WFSSLLAQAEADLRDLLGIPDE-YGVVFLQGGSSL 79 (364)
T ss_pred cceecCCCcC--CCHHHHHHHHHHHhcccccCccccccccccH--HHHHHHHHHHHHHHHHhCCCCC-CeEEEEeccHHH
Confidence 5666666543 478888888877643 1 122322 2356777777888888885322 355 45556999
Q ss_pred HHHHHHHHhcCCCCEEE--EcCCCCCC-hHHHHHHcCCEEEEecCCCC--CCCCCCHHHHHhhcccCCcEEEEcCCCCCc
Q 014172 167 SILQAVLAVCSPGDEVI--IPAPFWVS-YPEMARIADATPVILPTRIS--ENFLLDPKVLESKLTEKSRLLILCSPSNPT 241 (429)
Q Consensus 167 al~~~l~~l~~~gd~Vl--v~~p~y~~-~~~~~~~~g~~~~~v~~~~~--~~~~~d~e~l~~~l~~~~~~i~l~~p~NPt 241 (429)
++.++...++.+||+++ +..-.|.. +...++.+| ++..+..... -+..++++.+ .+.++.+.|.+|+-.-.|
T Consensus 80 ~~ea~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d~~~v~~t~NETst 156 (364)
T PRK12462 80 QFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDARAPFRHYVSNETVE 156 (364)
T ss_pred HHHHHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCCCCcEEEEccCCCCc
Confidence 99999999999999654 44444432 335666666 5544432111 1234566665 234467777777777789
Q ss_pred cCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHH
Q 014172 242 GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFV 321 (429)
Q Consensus 242 G~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~ 321 (429)
|+.++ ++.+.+ +.++|+|.+-..+ ..+..+..+ .++..+.-|.+|.+| ++.++.+++++
T Consensus 157 Gv~~~--------~~~~~~-~~llvvD~sS~~~----s~pid~~~~------dvi~agsQKnlgP~G--ltvvivs~~al 215 (364)
T PRK12462 157 GLQFP--------DAAGLP-DSPLIADMSSDFM----SRPFDVEAY------GMVYAHAQKNLGPAG--VTVAIIRRALL 215 (364)
T ss_pred eEecC--------cccccC-CCeEEEEcCchhh----CCCCChHHc------cEEEeeccccCCCCc--eEEEEECHHHH
Confidence 99986 233346 7899999887652 222222222 488888999999777 67888888877
Q ss_pred HHHHHH------------hhcccCCCchHHHHHHHHHHhcCCCChH--HHHHHHHHHHHHHHHHHHHhccCCCceee---
Q 014172 322 AACNKI------------QSQFTSGASSISQKAGVAALGLGYAGGE--VVSKMVKAFRERRDFLVKSFGELEGVKMS--- 384 (429)
Q Consensus 322 ~~l~~~------------~~~~~~~~~~~~q~aa~~~l~~~~~~~~--~~~~~~~~~~~~r~~l~~~L~~l~g~~~~--- 384 (429)
+..... ......+|+.+..+++..+|+.- .++ .++.+.++.+++.+.+++.+++.+|+...
T Consensus 216 ~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i--~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~ 293 (364)
T PRK12462 216 ERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWI--RDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAH 293 (364)
T ss_pred hhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHH--HHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCC
Confidence 654321 11122356777777777776531 134 68888999999999999999998654332
Q ss_pred -cCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCee
Q 014172 385 -EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVL 427 (429)
Q Consensus 385 -~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~ 427 (429)
...+-+-+.+++++. .-..+|.+.+.++ |+.
T Consensus 294 ~~~RS~mnv~f~~~~~-----------~l~~~f~~~a~~~-gl~ 325 (364)
T PRK12462 294 RAARSTMNVAFRFRQP-----------RLDTLFKEQSTEA-GFC 325 (364)
T ss_pred hhhcCcceEEEEcCCH-----------HHHHHHHHHHHHC-CCc
Confidence 234456677777542 1245666655444 553
No 373
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.19 E-value=5.6e-09 Score=98.77 Aligned_cols=268 Identities=15% Similarity=0.147 Sum_probs=168.1
Q ss_pred hcCCCeEEcCCCCCCCCC---hHHHHHHHHHHHHcC---CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChH
Q 014172 92 QAGVSVIRLAAGEPDFDT---PVLIAEAGINAIREG---FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAK 165 (429)
Q Consensus 92 ~~g~~~i~L~~g~~~~~~---p~~v~~a~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~ 165 (429)
..|+.++|+-.|.-.... +|++.+++.+.+..- ...|.. .-..+|-+++++.+- -+-..++++++++
T Consensus 47 e~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~~~~~-~pi~~~Ae~L~s~~P------~~l~~vfF~nsGs 119 (442)
T KOG1404|consen 47 EEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTSGYLN-PPIHDLAEALVSKLP------GDLKVVFFVNSGS 119 (442)
T ss_pred CCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEeeccccC-CcHHHHHHHHHHhCC------CCceEEEEecCCc
Confidence 356778888887743222 688999888877532 234532 224567677766652 1335789999999
Q ss_pred HHHHHHHHHhcC-CC-CEEEEcCCCCCC-hHHHHHHcCCEEEEecCCCC--------------CCCCCC---------HH
Q 014172 166 QSILQAVLAVCS-PG-DEVIIPAPFWVS-YPEMARIADATPVILPTRIS--------------ENFLLD---------PK 219 (429)
Q Consensus 166 ~al~~~l~~l~~-~g-d~Vlv~~p~y~~-~~~~~~~~g~~~~~v~~~~~--------------~~~~~d---------~e 219 (429)
+|.+++++.... -| -.|+.-..+|.+ ....+-+.|......+...- .-|.=+ .+
T Consensus 120 EANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~ 199 (442)
T KOG1404|consen 120 EANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAK 199 (442)
T ss_pred hHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHH
Confidence 999988877532 12 245555666654 44444444443322221100 001001 13
Q ss_pred HHHhhcc---cCCc-EEEEcCCCCCccCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCce
Q 014172 220 VLESKLT---EKSR-LLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERT 294 (429)
Q Consensus 220 ~l~~~l~---~~~~-~i~l~~p~NPtG~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~ 294 (429)
++++.+. +++- +.+..+.+.-.|.+ +++-.+++..++|+++ |.+.|.||+...|...| .+..+.. .+.+
T Consensus 200 ~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~-Ggl~IaDEVqtGfGRtG----~~wgfe~-h~v~ 273 (442)
T KOG1404|consen 200 ELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKR-GGLFIADEVQTGFGRTG----HMWGFES-HGVV 273 (442)
T ss_pred HHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHc-CCEEEehhhhhcccccc----ccccccc-cCCC
Confidence 3444432 2333 34445556656755 4556899999999999 99999999999976555 2333322 3444
Q ss_pred EEEeccChhcccccceeeEEEcCHHHHHHHHHHh-hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHH
Q 014172 295 LTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ-SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVK 373 (429)
Q Consensus 295 i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~-~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~ 373 (429)
--+-|++|.+| .|..+|.+++.+++.+.+.+.. ..++++.++.+.+++.+.|+-- .++ ++.+.-++.-.++.+
T Consensus 274 PDIvTmAKgiG-nG~Pl~AVvtt~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vi--kee---~LqE~aa~vG~yl~~ 347 (442)
T KOG1404|consen 274 PDIVTMAKGIG-NGFPLGAVVTTPEIADVLNQKSSHFNTYGGNPVACAVGLAVLKVI--KEE---NLQENAAEVGSYLLE 347 (442)
T ss_pred ccHHHHHhhcc-CCCcceeeecCHHHHHHHHhccccccccCCCchhHHHHHHHHHHH--HHH---hHHHHHHHHHHHHHH
Confidence 45889999999 9999999999999999998776 5667778888888888888751 133 333444445556666
Q ss_pred HhccC
Q 014172 374 SFGEL 378 (429)
Q Consensus 374 ~L~~l 378 (429)
.|.++
T Consensus 348 ~l~~l 352 (442)
T KOG1404|consen 348 KLAAL 352 (442)
T ss_pred HHHHH
Confidence 66554
No 374
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.10 E-value=4.8e-08 Score=101.10 Aligned_cols=277 Identities=13% Similarity=0.103 Sum_probs=170.1
Q ss_pred ChHHHHHH-HHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCC---------
Q 014172 109 TPVLIAEA-GINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSP--------- 178 (429)
Q Consensus 109 ~p~~v~~a-~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~--------- 178 (429)
.++.++.. +...+......|..+++...+.+.+.+++.+..|.+ ...=.+|+|||++...++.+..+.
T Consensus 95 ~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~--~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~ 172 (608)
T TIGR03811 95 LMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYK--NGWGHIVADGSLANLEGLWYARNIKSLPFAMKE 172 (608)
T ss_pred CHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCC--CCCeEEeCChHHHHHHHHHHHHHhhhccchhhh
Confidence 34444444 344444444455556678899999999999999964 334457888888777655543210
Q ss_pred -------------------------------------------C------CEEEEcCCCCCChHHHHHHcCC---EEEEe
Q 014172 179 -------------------------------------------G------DEVIIPAPFWVSYPEMARIADA---TPVIL 206 (429)
Q Consensus 179 -------------------------------------------g------d~Vlv~~p~y~~~~~~~~~~g~---~~~~v 206 (429)
| -.|+++.-.|.+...++..+|+ .++.|
T Consensus 173 ~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~V 252 (608)
T TIGR03811 173 VKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPV 252 (608)
T ss_pred ccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEe
Confidence 0 0578888889999999999999 58899
Q ss_pred cCCCCCCCCCCHHHHHhhccc----C--CcEEEEcCCCCCccCCCCHHHHHHHHHHH---HhCCCe--EEEEccCCcccc
Q 014172 207 PTRISENFLLDPKVLESKLTE----K--SRLLILCSPSNPTGSVYPKNLLDEIARIV---AKHPRL--LVLSDEIYEHII 275 (429)
Q Consensus 207 ~~~~~~~~~~d~e~l~~~l~~----~--~~~i~l~~p~NPtG~~~~~~~l~~I~~~a---~~~~~i--~vi~Deay~~~~ 275 (429)
|++ +++.+|++.|++.|.+ + +-+|+-+...-.+|.+=| +++|+++| +++ ++ |+.+|.||+++.
T Consensus 253 pvD--~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDp---l~eI~~l~~~~~~~-gl~~~lHVDAAyGG~~ 326 (608)
T TIGR03811 253 PVD--SNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDG---IDKIVALRNKLMKE-GIYFYLHVDAAYGGYG 326 (608)
T ss_pred ecC--CCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCC---HHHHHHHHHHHHHc-CCceeEeeeccccchh
Confidence 986 4567999999998853 2 234455667778999999 55555555 788 87 699999999852
Q ss_pred ---cCCCC--CCcc-------------------------ccCCCCCCceEEEeccChhcccccceeeEEEcCH-HHHHHH
Q 014172 276 ---YAPAT--HTSF-------------------------ASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK-HFVAAC 324 (429)
Q Consensus 276 ---~~~~~--~~~~-------------------------~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~-~~~~~l 324 (429)
+-+.. ..++ ..+.+.....=+...++|.+. .....|.++..+ .+.+.+
T Consensus 327 ~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~-~Py~~G~ll~Rd~~~~~~~ 405 (608)
T TIGR03811 327 RAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGY-IPYSAGGIVIQDIRMRDVI 405 (608)
T ss_pred hhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccc-cCCCeEEEEEeCHHHHHHH
Confidence 11100 0000 001111222335667899876 556788777654 443333
Q ss_pred HHHhhc--------------ccCCCchHHHHHHH--HHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC------CCce
Q 014172 325 NKIQSQ--------------FTSGASSISQKAGV--AALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL------EGVK 382 (429)
Q Consensus 325 ~~~~~~--------------~~~~~~~~~q~aa~--~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l------~g~~ 382 (429)
.....+ ++...+.++..++. ..++.-..+.+.+.++.++..+.++++.+.|.+. +.++
T Consensus 406 ~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~e 485 (608)
T TIGR03811 406 SYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIE 485 (608)
T ss_pred hcCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCee
Confidence 211100 01122323322222 2222210145677888888888888898888773 3455
Q ss_pred e---ecCCceEEEEE
Q 014172 383 M---SEPQGAFYLFI 394 (429)
Q Consensus 383 ~---~~p~~~~~~~~ 394 (429)
+ .+|+-++.+|.
T Consensus 486 l~~~~~pdlniV~Fr 500 (608)
T TIGR03811 486 VHPLTKPDFNMVDYV 500 (608)
T ss_pred EEecCCCCcceEEEE
Confidence 4 46777775544
No 375
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.10 E-value=1e-08 Score=94.86 Aligned_cols=302 Identities=14% Similarity=0.145 Sum_probs=184.6
Q ss_pred cCCCeEEcCCCCCCC---CChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGEPDF---DTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~~~~---~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..+||-.+.... ..+|.+.+++.+..+. ...+...-+..+--+.++++.+.+| -+-|+.++.+.|+.+
T Consensus 57 eGk~ylDflsaysaVnqGhchpki~~aLqeq~~k--LtlssrafYnd~~~~f~~~vt~lf~----~~kvlpmnTGaEa~E 130 (427)
T KOG1402|consen 57 EGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADK--LTLSSRAFYNDVLGEFAEYVTKLFG----YDKVLPMNTGAEAVE 130 (427)
T ss_pred CccchhhhhhhhhhcccCCCCHHHHHHHHHHHhH--hhhhhHHHhhhhHHHHHHHHHHhcC----cceeeecccchhHHH
Confidence 355566665555332 2378899998887653 1111112234455566666666655 356888888899998
Q ss_pred HHHHHhc------C--C-CC-EEEEcCCCCCChHHH----------HHHcCC----EEEEecCCCCCCCCCCHHHHHhhc
Q 014172 170 QAVLAVC------S--P-GD-EVIIPAPFWVSYPEM----------ARIADA----TPVILPTRISENFLLDPKVLESKL 225 (429)
Q Consensus 170 ~~l~~l~------~--~-gd-~Vlv~~p~y~~~~~~----------~~~~g~----~~~~v~~~~~~~~~~d~e~l~~~l 225 (429)
.++.... + | .. .|+....+|.+-... .+.+|- .+..+|. + |.++|+.++
T Consensus 131 ta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y---~----d~eale~~l 203 (427)
T KOG1402|consen 131 TACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY---G----DAEALEVAL 203 (427)
T ss_pred HHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc---C----CHHHHHHHh
Confidence 8877652 1 3 22 344444444432111 111111 1222332 1 789999999
Q ss_pred ccC-CcEEEEcCCCCCccCCCCHH-HHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChh
Q 014172 226 TEK-SRLLILCSPSNPTGSVYPKN-LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKA 303 (429)
Q Consensus 226 ~~~-~~~i~l~~p~NPtG~~~~~~-~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 303 (429)
.++ ..++++.--+-..|++.|+. .++++.++|.+| |+++|.||++.++...|.. ........ ...+++ |.|.
T Consensus 204 ~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtky-nvl~I~DEvQTGl~RTGk~--la~d~env-~PDivi--lgKa 277 (427)
T KOG1402|consen 204 KSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKY-NVLLIADEVQTGLARTGKL--LACDYENV-RPDIVI--LGKA 277 (427)
T ss_pred cCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhh-cEEEEehhhhhcccccCcE--EEeehhhc-CCCeEE--Eecc
Confidence 764 44444444478889777665 699999999999 9999999999988765531 11111111 112444 7899
Q ss_pred cccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC----
Q 014172 304 FAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE---- 379 (429)
Q Consensus 304 ~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~---- 379 (429)
++-.=..+..++++++++..+.......+++-++++.++++++|+- .. -+++.++-.+.-+.++++|.+++
T Consensus 278 lSGG~~Pvsavl~~~~im~~~~pgeHgsTyggNpLg~~vaiAalev---i~--eekL~era~~lG~~l~~~L~~l~~~~p 352 (427)
T KOG1402|consen 278 LSGGVYPVSAVLADDDIMLNIKPGEHGSTYGGNPLGCAVAIAALEV---IV--EEKLVERAAKLGEILRDQLNKLQKKFP 352 (427)
T ss_pred ccCCeeeeEEEEecHHHHhccCCCccccccCCChHHHHHHHHHHHH---HH--HHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 9723367888899999998887776677788899999999999974 12 23455666666777788877763
Q ss_pred C-ceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCee
Q 014172 380 G-VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVL 427 (429)
Q Consensus 380 g-~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~ 427 (429)
+ ++.++..| ++.-+.+... . ....++.++|..|.++ |++
T Consensus 353 ~~v~~VRGrG-l~~ai~i~~~---~----~~~~~aw~~cl~lk~~-g~L 392 (427)
T KOG1402|consen 353 HVVKEVRGRG-LLNAIVINPS---K----TSGQDAWDVCLALKEN-GLL 392 (427)
T ss_pred chhheeeccc-eEEEEEeccc---c----ccchhHHHHHHccccc-ccc
Confidence 3 24444444 5555554321 0 0113678888876554 654
No 376
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.05 E-value=8e-08 Score=103.04 Aligned_cols=298 Identities=11% Similarity=0.146 Sum_probs=180.4
Q ss_pred HHHHHHHHHHhcCCCe-EEcCCCCCCCCChHHHHHHHHHHHHcC-CCCCCCC-----CCCHHHHHHHHHHHHhhcCCCCC
Q 014172 82 AITDQATALAQAGVSV-IRLAAGEPDFDTPVLIAEAGINAIREG-FTRYTPN-----AGTLELRSAICHKLKEENGLSYT 154 (429)
Q Consensus 82 ~~~~~~~~~~~~g~~~-i~L~~g~~~~~~p~~v~~a~~~~~~~~-~~~Y~~~-----~G~~~lr~~ia~~l~~~~g~~~~ 154 (429)
++.+..+++.+..... .-++.|.=+.-.|+.+.+.+.+.- + ++.|+|- +|..+..-.+...+.+..| .+
T Consensus 50 e~~~~~~~la~~N~~~~~fig~G~y~~~~p~~i~r~v~~~p--~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtG--m~ 125 (939)
T TIGR00461 50 EALAHLKKIASKNHKFKSYIGMGYYGTILPPVIQRNLLENP--GWYTAYTPYQPEISQGRLEALLNFQTVVSDLTG--LP 125 (939)
T ss_pred HHHHHHHHHHhcCCCccccCCCCcCCCcCChHHHHHHHhCc--hhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHC--CC
Confidence 4444555555444332 223455544445777775555421 2 3455553 4655444444444555556 35
Q ss_pred CCcEEEecChHHHHHHHHHHhc-C--CCCEEEEcCCCCCChHHHHH----HcCCEEEEecCCCCCCCCCCHHHHHhhccc
Q 014172 155 PDQILVSNGAKQSILQAVLAVC-S--PGDEVIIPAPFWVSYPEMAR----IADATPVILPTRISENFLLDPKVLESKLTE 227 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~-~--~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~ 227 (429)
..|.-+..+++++.++++++.. . ++++|++++-.|+.+...++ ..|.+++.++ ++++++.+
T Consensus 126 ~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~----------~~~l~~~~-- 193 (939)
T TIGR00461 126 VANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD----------CSDIKKAV-- 193 (939)
T ss_pred hhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc----------HHHHhhcC--
Confidence 5678888888888887776642 2 34899999999998885554 7888988874 33455555
Q ss_pred CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccc-
Q 014172 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM- 306 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~- 306 (429)
++.++++.+|+. .|.+-+ +++|+++++++ +.+++++.--..+ .+..-++.++-+|++++ +|.||+
T Consensus 194 ~~~~v~~q~Pn~-~G~ied---~~~i~~~~h~~-gal~~~~ad~~al--------~ll~~Pge~GaDi~vg~-~q~fg~p 259 (939)
T TIGR00461 194 DVFGCLLQYPAT-DGSILD---YKQLIDALHSH-KSLVSVAADLMAL--------TLLTPPGHYGADIVLGS-SQRFGVP 259 (939)
T ss_pred CEEEEEEECCCC-CeEEec---HHHHHHHHHHc-CCEEEEEechHHh--------CCcCCHHHcCCcEEeeC-CCccCCC
Confidence 466777888876 899876 99999999999 8888874322211 11112233455566543 344442
Q ss_pred ---ccceeeEEEcCHHHHHHH----------------------------HHHhhcccCCCchHHHHHHHH--HHhcCCCC
Q 014172 307 ---TGWRLGYIAGPKHFVAAC----------------------------NKIQSQFTSGASSISQKAGVA--ALGLGYAG 353 (429)
Q Consensus 307 ---~G~R~G~v~~~~~~~~~l----------------------------~~~~~~~~~~~~~~~q~aa~~--~l~~~~~~ 353 (429)
.|.-.|++.+.+++.+.+ ++.+...+.|.+....+.... +.-. +
T Consensus 260 ~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~---G 336 (939)
T TIGR00461 260 MGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYH---G 336 (939)
T ss_pred CCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHH---C
Confidence 356678887777665543 111222233333333221112 2223 4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEE--EecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 354 GEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLF--IDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 354 ~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+.++++.++...+..++.+.|++. |+++..+ .||=. ++++. .+..++.++|+++ ||.+
T Consensus 337 ~~GL~~iA~~~~~~a~~l~~~L~~~-G~~~~~~--~fF~~~~v~~~~------------~~~~~i~~~~~~~-gi~l 397 (939)
T TIGR00461 337 PKGLKNIARRIHSLTSILANGLEND-PHELINK--TWFDTLTVKVGN------------GISSELLKAAEEF-NINL 397 (939)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCC--CccceEEEEeCC------------CCHHHHHHHHHHC-CCee
Confidence 6788899888899999999999995 9887654 45533 34431 2578899988776 7754
No 377
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.02 E-value=4.5e-08 Score=94.78 Aligned_cols=308 Identities=15% Similarity=0.157 Sum_probs=190.8
Q ss_pred cCCCeEEcCCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHH
Q 014172 93 AGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 171 (429)
Q Consensus 93 ~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~ 171 (429)
.|.+-.++..|...+. +++..+-+.+.+.. +...-.-.++..++.+++-.++...++-+ ....=..|.|+++++.++
T Consensus 77 d~~~~~~~vS~~v~~~-~~~~~~l~~~~~~k~N~l~~d~fp~~~~~e~~~Vnm~~~L~~~~-~~~~g~~t~G~Ses~l~~ 154 (491)
T KOG1383|consen 77 DGNPRLGLASGVVYWG-EPELDKLIMEAYNKFNPLHPDEFPVVRKLEAECVNMIANLFNAP-SDSCGCGTVGGSESGLAA 154 (491)
T ss_pred CCCcccCeeeEEEecC-CcchhhHHHHHHhhcCccCccccchhHHHHHHHHHHHHHHhcCC-ccccCccccccchHHHHH
Confidence 3444455555555444 44555555555543 22222223577888888888888888754 222336788999996655
Q ss_pred HHHh----cC-CC---CEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccC
Q 014172 172 VLAV----CS-PG---DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGS 243 (429)
Q Consensus 172 l~~l----~~-~g---d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~ 243 (429)
.... .. .| .+++++.-.+..+...++.++.++..||+++ +++.+|+..+.+.+++++.+++..-|+-|+|.
T Consensus 155 ~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~-~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~ 233 (491)
T KOG1383|consen 155 KKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREVPLDE-GDYRVDPGKVVRMIDENTIMLVGSLPNFPTGE 233 (491)
T ss_pred HHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEEeeeccc-cceEecHHHHHHHhccceEEEEEEcCCCCccc
Confidence 5443 11 23 4577777788888889999999999999986 67999999999999999999999999999998
Q ss_pred CCCHHHHHHHHHHHHh-CCCeEEEEccCCcccccC-CCCCCccccCCCCCCceEEEe-ccChhcccccceeeEEEcC-HH
Q 014172 244 VYPKNLLDEIARIVAK-HPRLLVLSDEIYEHIIYA-PATHTSFASLPGMWERTLTVN-GFSKAFAMTGWRLGYIAGP-KH 319 (429)
Q Consensus 244 ~~~~~~l~~I~~~a~~-~~~i~vi~Deay~~~~~~-~~~~~~~~~~~~~~~~~i~~~-S~SK~~~~~G~R~G~v~~~-~~ 319 (429)
.=+ +++|.++..+ + ++.+.+|.+-+.|+-. +... ...++-....|-.+. +-+| ||+.--.+||++-. ++
T Consensus 234 ~e~---ve~l~~l~~e~w-~ipiHvDa~~GgFi~p~~~~~--~~~fdFr~p~V~Sisa~~HK-YGl~~~G~~~vl~r~k~ 306 (491)
T KOG1383|consen 234 IED---VEKLADLLLEIW-DIPIHVDACLGGFINPAGYLN--EEEFDFRVPGVTSISADGHK-YGLAPAGSSWVLYRNKE 306 (491)
T ss_pred hhh---HHHHHHHHHHHh-CCceeecccCccccccccccC--ccccccCCCCceeEeeccce-eeeeecCcEEEEEcccc
Confidence 866 8899999888 9 9999999999887642 1111 111111111222222 2345 55554558998753 22
Q ss_pred HHH-H-------HHHHhhcccCCCchHHHHHHH---HHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceee-cCC
Q 014172 320 FVA-A-------CNKIQSQFTSGASSISQKAGV---AALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-EPQ 387 (429)
Q Consensus 320 ~~~-~-------l~~~~~~~~~~~~~~~q~aa~---~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~-~p~ 387 (429)
+.. + +.......+...|..+...+. +.+.. +++...+..+...+....+.+.+++++++.+. +|.
T Consensus 307 ~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~l---G~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~ 383 (491)
T KOG1383|consen 307 LLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSL---GEEGYRENTQNIVETARKLREGIENIKGIKIVGKPL 383 (491)
T ss_pred cccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCc
Confidence 221 1 111111222222222222221 12233 45556666677777888899999998888776 344
Q ss_pred ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCee
Q 014172 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVL 427 (429)
Q Consensus 388 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~ 427 (429)
-++ +..+-.. .+-.++.+.|.+. |..
T Consensus 384 vs~-~~~~s~~------------~~i~elsd~l~~~-GW~ 409 (491)
T KOG1383|consen 384 VSF-ILFGSND------------VNIFELSDLLRKK-GWI 409 (491)
T ss_pred EEE-EEccCCc------------cchhhhhHHHHhc-CcC
Confidence 444 2222221 2566777766554 543
No 378
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.01 E-value=5.4e-10 Score=106.52 Aligned_cols=266 Identities=20% Similarity=0.179 Sum_probs=58.0
Q ss_pred EEcCCCCCCCCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHH-HHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh
Q 014172 98 IRLAAGEPDFDTPVLIAEAGINAIREG-FTRYTPNAGTLELR-SAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 175 (429)
Q Consensus 98 i~L~~g~~~~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr-~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l 175 (429)
+.-+.|..+ .++++.+++.+..... ...|.-..|-..-| ..+.+.+.... ..+..+++++...++.+++.++
T Consensus 9 lHTnLGRs~--l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~lt----gAeaA~VvNnnaAAv~L~l~~l 82 (367)
T PF03841_consen 9 LHTNLGRSP--LSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCELT----GAEAALVVNNNAAAVLLALNTL 82 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccc--ccccccccccccccccccccccccccccccccccccccccccc----cccccccccccccccccccccc
Confidence 344455544 3567777776654321 12343222222111 11222332222 3467788888888898888888
Q ss_pred cCCCCEEEEcCCCCC------ChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHH-
Q 014172 176 CSPGDEVIIPAPFWV------SYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKN- 248 (429)
Q Consensus 176 ~~~gd~Vlv~~p~y~------~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~- 248 (429)
+ +|.+|++..---. -..++++..|++++.|-.... -.+++++++|+++|.+++-.+++|-.-.-++.+
T Consensus 83 a-~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN~----t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~~ 157 (367)
T PF03841_consen 83 A-KGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTNR----THLSDYEKAITENTAALLKVHTSNFRIQGFTGEV 157 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred c-cccccccccccccccccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccc
Confidence 6 5677777653222 256788899999999986422 368899999999999998888877532211111
Q ss_pred HHHHHHHHHHhCCCeEEEEccCCcccc----cCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHH
Q 014172 249 LLDEIARIVAKHPRLLVLSDEIYEHII----YAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC 324 (429)
Q Consensus 249 ~l~~I~~~a~~~~~i~vi~Deay~~~~----~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l 324 (429)
.++++++++++| ++++|+|..-+.+. |+-...+++..... .+..++++|-.|.+| |...|.+++.+++++.+
T Consensus 158 ~~~el~~la~~~-~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~-~GaDlV~fSGdKlLG--GPQaGiI~Gkk~lI~~l 233 (367)
T PF03841_consen 158 SLEELAELAKEH-GLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLA-AGADLVTFSGDKLLG--GPQAGIIVGKKELIEKL 233 (367)
T ss_dssp ---HHHHHHHHH-T--EEEE-TTHHHHHHHTT----------CCC-CT-SEEEEETTSSSS--S-S-EEEEEEHHHHHHH
T ss_pred cHHHHHHHHhhc-CCcEEEECCCCCCcCcccccCccccHHHHHhh-cCCCEEEEECCCcCC--CCCeEEEEeCHHHHHHH
Confidence 289999999999 99999998874332 22112344544433 466799999999986 77799999999999999
Q ss_pred HHHhhcccCCCchHHHHHHHHHHhcCCC---------ChHHHHHHHHHHHHHHHHHHHHhccC
Q 014172 325 NKIQSQFTSGASSISQKAGVAALGLGYA---------GGEVVSKMVKAFRERRDFLVKSFGEL 378 (429)
Q Consensus 325 ~~~~~~~~~~~~~~~q~aa~~~l~~~~~---------~~~~~~~~~~~~~~~r~~l~~~L~~l 378 (429)
++..-....-..-....+..+.|..-.. ....+....+.++++.+.+.+.|...
T Consensus 234 k~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~~ 296 (367)
T PF03841_consen 234 KKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKAA 296 (367)
T ss_dssp HHHHHTTT-B--HHHHHHHHHHHHH--------------------------------------
T ss_pred hhCCCcceEeeCHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccccccccc
Confidence 8765444445667777777666654110 01123444566677777777777764
No 379
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.00 E-value=2e-08 Score=98.91 Aligned_cols=272 Identities=18% Similarity=0.224 Sum_probs=150.7
Q ss_pred HHHHHHHHHHhcCCC-eEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCC-----CCCCHHHHHHHHHHHHhhcCCCCCC
Q 014172 82 AITDQATALAQAGVS-VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTP-----NAGTLELRSAICHKLKEENGLSYTP 155 (429)
Q Consensus 82 ~~~~~~~~~~~~g~~-~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~-----~~G~~~lr~~ia~~l~~~~g~~~~~ 155 (429)
++.+...++.+.... .--++.|.-+.-.|+.+.+.+...- +-.+.|+| ++|..+..-.....+.+..|.+ .
T Consensus 51 e~~r~~~~la~kN~~~~~fiG~G~y~~~~P~~i~~~i~~~~-ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~eLTGmd--v 127 (429)
T PF02347_consen 51 ELLRHLERLASKNKSYTSFIGAGSYTHYVPAVIDRNILSRP-EFYTAYTPYQPEISQGRLQALFEYQSMICELTGMD--V 127 (429)
T ss_dssp HHHHHHHHHHTTS--TTS---CTTT-----HHHHH-HHCCH-HCCCS-STTSGGGBHHHHHHHHHHHHHHHHHHTSS--E
T ss_pred HHHHHHHHHHhcCCCCCccccccccCceeChhhcCccccCh-hhhccCCCCCcHHHHHHHHHHHHHHHHHHHhhCCC--c
Confidence 444455555544332 1123344433334555555233211 12356666 4566665556666666666743 2
Q ss_pred CcEEEecChHHHHHHHHHHh---cCCCCEEEEcCCCCCChHHHHH----HcCCEEEEecCCCCCCCCCCHHHHHhhcccC
Q 014172 156 DQILVSNGAKQSILQAVLAV---CSPGDEVIIPAPFWVSYPEMAR----IADATPVILPTRISENFLLDPKVLESKLTEK 228 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l---~~~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~ 228 (429)
-|.-+-.|++..-+.++++. -+..++|+++.-.|+.+...++ ..|.+++.++.+..+ ..| .++
T Consensus 128 aNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~--~~d--------~~~ 197 (429)
T PF02347_consen 128 ANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDG--TTD--------DDD 197 (429)
T ss_dssp E-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTC--SB---------STT
T ss_pred cCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccC--Ccc--------ccC
Confidence 34556667777776665554 2334699999999999987544 579999999986433 233 567
Q ss_pred CcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcc---
Q 014172 229 SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA--- 305 (429)
Q Consensus 229 ~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~--- 305 (429)
+.+|++.+||. .|.+-+ +++|.++++++ +.+++. .+- .+... ...-++.++-+|++++ +|.||
T Consensus 198 ~a~v~vq~Pn~-~G~~ed---~~~i~~~~h~~-gal~~~-~ad-~~aL~------~l~~Pge~GADI~vg~-~Q~fg~p~ 263 (429)
T PF02347_consen 198 TAAVMVQNPNT-FGVFED---IKEIADIAHAA-GALVIV-GAD-PNALG------GLKSPGEYGADIVVGE-HQTFGIPM 263 (429)
T ss_dssp EEEEEEESS-T-TSB--T---HHHHHHHHHHT-T-EEEE-CGG-CCGCC------TC--GGGGT-SEEEEC-CTTTT---
T ss_pred eEEEEeecCCC-CceEee---HHHHHHHHHHc-CCEEEE-ecC-HHHHh------CcCChhhcCccEEeeC-CCCCcccC
Confidence 88999999986 788877 99999999999 888775 221 11111 1122334566688776 67765
Q ss_pred -cccceeeEEEcCHHHHHHH----------------------------HHHhhcccCCCchHH--HHHHHHHHhcCCCCh
Q 014172 306 -MTGWRLGYIAGPKHFVAAC----------------------------NKIQSQFTSGASSIS--QKAGVAALGLGYAGG 354 (429)
Q Consensus 306 -~~G~R~G~v~~~~~~~~~l----------------------------~~~~~~~~~~~~~~~--q~aa~~~l~~~~~~~ 354 (429)
..|.-+|++.+.+++++.+ ++.+...+.|.+... ..++..+... +.
T Consensus 264 ~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~---G~ 340 (429)
T PF02347_consen 264 GFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYL---GP 340 (429)
T ss_dssp CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHH---HH
T ss_pred CCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHh---CH
Confidence 3567789998888766643 222223344444433 2333333334 57
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCcee
Q 014172 355 EVVSKMVKAFRERRDFLVKSFGELEGVKM 383 (429)
Q Consensus 355 ~~~~~~~~~~~~~r~~l~~~L~~l~g~~~ 383 (429)
+.++++.+....+..++.+.|+++.++.+
T Consensus 341 ~GL~~iA~~~~~~A~yl~~~L~~~~~~~~ 369 (429)
T PF02347_consen 341 EGLREIAERIHLNAHYLAERLKKIYGLPF 369 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCTTBECS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 88999999999999999999998634443
No 380
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.94 E-value=1.4e-07 Score=86.39 Aligned_cols=184 Identities=17% Similarity=0.267 Sum_probs=123.4
Q ss_pred CCCCC-CCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcC-CCCCChHHH--------
Q 014172 126 TRYTP-NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPA-PFWVSYPEM-------- 195 (429)
Q Consensus 126 ~~Y~~-~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~-p~y~~~~~~-------- 195 (429)
+.|+. +-|...|.+-.|+-+ |.....-+.-+. ++|.+|..++..+++|||+.+.-. .-|....+.
T Consensus 58 tGYGydD~GRdtLe~vyA~vf----~aE~a~VRpq~i-sGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~ 132 (416)
T COG4100 58 TGYGYDDLGRDTLERVYAQVF----GAEAALVRPQII-SGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQ 132 (416)
T ss_pred CCCCccccchhHHHHHHHHHh----ccccceeeeeee-cchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCc
Confidence 44543 345555555555554 422111122232 568899999999999999977443 335555544
Q ss_pred --HHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEc-CCCCCccCCCCHHHHHHHHHHHHh-CCCeEEEEccCC
Q 014172 196 --ARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC-SPSNPTGSVYPKNLLDEIARIVAK-HPRLLVLSDEIY 271 (429)
Q Consensus 196 --~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~-~p~NPtG~~~~~~~l~~I~~~a~~-~~~i~vi~Deay 271 (429)
++-.|.+...+|+..++ .+|.+.+.+.+++++|+|.|. +-..----.++.+++++++++.++ +||+++++|.+|
T Consensus 133 gSL~dfgi~Y~~v~Lt~~g--kiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCY 210 (416)
T COG4100 133 GSLKDFGIKYKAVPLTADG--KIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCY 210 (416)
T ss_pred ccHHHhCcceeecccccCC--cccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccc
Confidence 34567788888887544 599999999999999999872 221111123677789999998876 579999999999
Q ss_pred cccccCCCCCCccccCCCCCCceEEEeccChhcccccce--eeEEEcCHHHHHHHH
Q 014172 272 EHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWR--LGYIAGPKHFVAACN 325 (429)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R--~G~v~~~~~~~~~l~ 325 (429)
++|+-. ..+.- -+..+..+|+-|.-| .|+- -||+.+..+++++..
T Consensus 211 GEFvE~--~EPt~------vGaDliAGSLIKNpG-GgiaktGGYiaGk~~~ve~~~ 257 (416)
T COG4100 211 GEFVEE--KEPTH------VGADLIAGSLIKNPG-GGIAKTGGYIAGKAELVEAAA 257 (416)
T ss_pred hhhhhc--cCccc------cchhhhccceeeCCC-CceeeccceeechHHHHHhhc
Confidence 997632 22211 244588999999876 4432 489999999988764
No 381
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.89 E-value=4.6e-07 Score=87.23 Aligned_cols=314 Identities=18% Similarity=0.190 Sum_probs=182.7
Q ss_pred HHHHHHHHHHhcC----CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCC---CCCHHHHHHHHHHHHhhcCCCCC
Q 014172 82 AITDQATALAQAG----VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPN---AGTLELRSAICHKLKEENGLSYT 154 (429)
Q Consensus 82 ~~~~~~~~~~~~g----~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~---~G~~~lr~~ia~~l~~~~g~~~~ 154 (429)
++.+-..++.+.+ ..+|.|++..--+.+--+..-+....+. ..+-|.|. +|+.++...+.+||.+.-|.
T Consensus 49 e~~Rh~~rLs~kn~avd~~m~PLGSCTMK~Np~~e~~~~~~p~f~-~iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~--- 124 (496)
T COG1003 49 EMVRHYTRLSQKDLAVDRGMIPLGSCTMKLNPKAEMKPATWPEFA-NIHPFQPEEQVQGYLELIYELQEWLKEITGM--- 124 (496)
T ss_pred HHHHHHHHHHhcccccccCccCCcccccccCchhhcccccccchh-hcCCCCChHHHHHHHHHHHHHHHHHHHhcCC---
Confidence 4455555555432 2456666665444332221111111111 13445443 68889999999999988773
Q ss_pred CCcEEEecC-hHHHHHH---HHHHh-cCCC----CEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhc
Q 014172 155 PDQILVSNG-AKQSILQ---AVLAV-CSPG----DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL 225 (429)
Q Consensus 155 ~~~i~~t~G-~~~al~~---~l~~l-~~~g----d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l 225 (429)
+.|.+.+. +.++-+. +++.. -..| +.||+|+..|..-...+.++|.+++.|+.+.++ .+|+++|++++
T Consensus 125 -DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~~~G--~VDlddLk~k~ 201 (496)
T COG1003 125 -DAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVKCDENG--NVDLDDLRAKA 201 (496)
T ss_pred -ceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEEEecCCCC--CccHHHHHHHh
Confidence 34544432 2222222 33333 2333 689999999999999999999999999998554 49999999999
Q ss_pred ccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcc
Q 014172 226 TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 305 (429)
Q Consensus 226 ~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 305 (429)
.+++.++.|++||- .|.. ++.+++|+++.+++ |-.|..|.+--.-..+-.. +++.+-.|+=.-++|+|+
T Consensus 202 ~~~~AalMiTnPsT-~GvF--E~~I~ei~~ivH~~-Gg~vY~DGANlNA~vG~~r-------PGd~G~DV~HlNLHKTF~ 270 (496)
T COG1003 202 EDNLAALMITNPST-LGVF--EEDIREICEIVHEA-GGQVYYDGANLNAIVGLAR-------PGDMGFDVVHLNLHKTFC 270 (496)
T ss_pred ccceeEEEeccCcc-cccc--hhhHHHHHHHHHHc-CCEEEecCcchhhhhcccc-------ccccccceEEeecccccc
Confidence 99999999999974 3443 66799999999999 8999999875432221111 222333455556788874
Q ss_pred c----ccceeeEEEcCHHHHHHHHH----H--hh-------c-------ccCCCchHHHHHHHHHH-hcCCCChHHHHHH
Q 014172 306 M----TGWRLGYIAGPKHFVAACNK----I--QS-------Q-------FTSGASSISQKAGVAAL-GLGYAGGEVVSKM 360 (429)
Q Consensus 306 ~----~G~R~G~v~~~~~~~~~l~~----~--~~-------~-------~~~~~~~~~q~aa~~~l-~~~~~~~~~~~~~ 360 (429)
. .|...|=+.+..+++..+-. . .. . ..++ +......+..++ .. +.+.+++.
T Consensus 271 iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~G-s~~il~~a~~YI~~m---G~~GL~~a 346 (496)
T COG1003 271 IPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYG-SASILPIAWAYIRMM---GADGLKQA 346 (496)
T ss_pred cCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccC-cchHHHHHHHHHHHH---hHHHHHHH
Confidence 3 45556655554444332211 0 00 0 0011 111122222222 22 35667777
Q ss_pred HHHHHHHHHHHHHHhccCCCcee-ecCC--ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCe
Q 014172 361 VKAFRERRDFLVKSFGELEGVKM-SEPQ--GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQV 426 (429)
Q Consensus 361 ~~~~~~~r~~l~~~L~~l~g~~~-~~p~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV 426 (429)
.+.---+.+++.++|+.. +++ +.+. -..=+.++..... . +......+++++|++. |+
T Consensus 347 se~AvLNANYia~rL~~~--y~~~y~~~~~~~HE~ild~r~l~--~----~~Gv~~~DvAKrLlD~-Gf 406 (496)
T COG1003 347 SEVAVLNANYIARRLKGY--YPVPYTGENRVAHECILDARPLK--K----ETGVRALDVAKRLLDY-GF 406 (496)
T ss_pred HHHHHHhHHHHHHHhhhc--CccccCCCCcceeEEEeechHhH--h----hcCCcHHHHHHHHHhc-CC
Confidence 666677889999999862 222 1222 1221233433110 0 1114789999999986 64
No 382
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.85 E-value=1.6e-06 Score=83.56 Aligned_cols=281 Identities=16% Similarity=0.197 Sum_probs=174.0
Q ss_pred HHHHHHHHHhcCCCeE-EcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCC-----CCCH----HHHHHHHHHHHhhcCCC
Q 014172 83 ITDQATALAQAGVSVI-RLAAGEPDFDTPVLIAEAGINAIREGFTRYTPN-----AGTL----ELRSAICHKLKEENGLS 152 (429)
Q Consensus 83 ~~~~~~~~~~~g~~~i-~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~-----~G~~----~lr~~ia~~l~~~~g~~ 152 (429)
.....+++........ -++.|.=+.-+|+.+.+.+.+.- .-++.|+|- +|.. ++...++++ .|.
T Consensus 62 ~l~~l~~ia~kN~~~~sfiG~GyY~~~~P~vI~rnile~p-ewyTaYTPYQpEISQGrLqaLfefQtlv~dL----TGm- 135 (450)
T COG0403 62 ALAELKEIASKNKVFTSFIGAGYYDTYTPPVILRNILENP-EWYTAYTPYQPEISQGRLEALFEFQTLVADL----TGL- 135 (450)
T ss_pred HHHHHHHHHhcCchhhhhccCcccCCcCcHHHHHHhhcCc-cccccCCCCchhhhhHHHHHHHHHHHHHHHH----hCC-
Confidence 3344445444444222 24555544445777775554421 113556663 4443 344455555 454
Q ss_pred CCCCcEEEecChHHHHHHHHHHhc---CCCCEEEEcCCCCCChHHHHHH----cCCEEEEecCCCCCCCCCCHHHHHhhc
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVC---SPGDEVIIPAPFWVSYPEMARI----ADATPVILPTRISENFLLDPKVLESKL 225 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~---~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~e~l~~~l 225 (429)
+-.|.-+--++|.+-+.++++.. .+..+++++.-.|+.+...++. .|.+++.++.+ |.+.+++.-
T Consensus 136 -~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~~~ 207 (450)
T COG0403 136 -DVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-------DLDDLESAD 207 (450)
T ss_pred -CcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-------hhhhhhhcc
Confidence 34466667778877776666652 2358999999999999887664 56777777753 778888873
Q ss_pred ccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEecc---Ch
Q 014172 226 TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGF---SK 302 (429)
Q Consensus 226 ~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~---SK 302 (429)
...+.++++.+|+. .|.. .+++++|.+.++++ +.++++ +.+ .-.-.+..-++.++-.|++++- .=
T Consensus 208 ~~~~~gv~vQyP~~-~G~~--~~d~~~l~~~~h~~-~al~~v---~aD-----plaL~LL~pPGe~GADIvvG~~QrfGv 275 (450)
T COG0403 208 DGDVFGVLVQYPNT-FGIV--EEDLRALIEAAHSA-GALVIV---AAD-----PLALGLLKPPGEFGADIVVGSAQRFGV 275 (450)
T ss_pred ccCeEEEEEecCCC-CCcc--chhHHHHHHHHhhc-CCEEEE---Eec-----hhHhhccCCccccCCceEEecCcccCC
Confidence 33678888888874 6622 23499999999999 766663 111 1112333445566777888874 44
Q ss_pred hcccccceeeEEEcCHHHHHH----------------------------HHHHhhcccCCCchHHHHHH--HHHHhcCCC
Q 014172 303 AFAMTGWRLGYIAGPKHFVAA----------------------------CNKIQSQFTSGASSISQKAG--VAALGLGYA 352 (429)
Q Consensus 303 ~~~~~G~R~G~v~~~~~~~~~----------------------------l~~~~~~~~~~~~~~~q~aa--~~~l~~~~~ 352 (429)
-+|..|..+||..+.+++.+. +++-+...+.|++..-.+.+ ..+.-.
T Consensus 276 PmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~h--- 352 (450)
T COG0403 276 PMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYH--- 352 (450)
T ss_pred CcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHh---
Confidence 556678889999888776553 23333444555554333222 222223
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhccCC-CceeecCCceEEEEE
Q 014172 353 GGEVVSKMVKAFRERRDFLVKSFGELE-GVKMSEPQGAFYLFI 394 (429)
Q Consensus 353 ~~~~~~~~~~~~~~~r~~l~~~L~~l~-g~~~~~p~~~~~~~~ 394 (429)
+.+.++++..+..+...++.++|++.. |+++... .||--+
T Consensus 353 Gp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~--~fFdt~ 393 (450)
T COG0403 353 GPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFD--HFFDTF 393 (450)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccc--cceeeE
Confidence 578899999999999999999999752 5766533 565433
No 383
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.84 E-value=1.7e-06 Score=81.49 Aligned_cols=301 Identities=17% Similarity=0.133 Sum_probs=172.7
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcCC------CC-CCCCCCCHHHHHHHHHHHHhhcCCCCCCC--cEEEecChHHH
Q 014172 97 VIRLAAGEPDFDTPVLIAEAGINAIREGF------TR-YTPNAGTLELRSAICHKLKEENGLSYTPD--QILVSNGAKQS 167 (429)
Q Consensus 97 ~i~L~~g~~~~~~p~~v~~a~~~~~~~~~------~~-Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~--~i~~t~G~~~a 167 (429)
-|.|=..++. +...+.+++-..+.+.+ .+ |+.+.-+.++.....++--+.|+.+-+.+ ||-.-+|+ .+
T Consensus 42 gieLIaSENF--ts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGS-PA 118 (477)
T KOG2467|consen 42 GIELIASENF--TSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGS-PA 118 (477)
T ss_pred ceeEeecccc--hHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCC-ch
Confidence 4666555554 45667777766665432 12 33322223333333333334567544445 44444454 45
Q ss_pred HHHHHHHhcCCCCEEEEcC-C--CCCChHHH--HHHcCCEEEE-----ecCCCCCCCCCCHHHHHhhccc-CCcEEEEcC
Q 014172 168 ILQAVLAVCSPGDEVIIPA-P--FWVSYPEM--ARIADATPVI-----LPTRISENFLLDPKVLESKLTE-KSRLLILCS 236 (429)
Q Consensus 168 l~~~l~~l~~~gd~Vlv~~-p--~y~~~~~~--~~~~g~~~~~-----v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~ 236 (429)
.+.+..+++.|+|+|.=.+ | .|-++-.. .+...+.-++ +.+++ ..+.+|.|.|++.... ++|+|+- .
T Consensus 119 NfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~-~TG~IDYD~Le~~A~~frPk~iia-G 196 (477)
T KOG2467|consen 119 NFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDP-STGYIDYDKLEKTATLFRPKLIIA-G 196 (477)
T ss_pred hhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCC-CCCceehHHHHHHHHhcCCcEEEe-c
Confidence 6668999999999988433 2 33222111 1222222222 23444 3456899999986544 7787763 1
Q ss_pred CCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcc-cccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEE
Q 014172 237 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA 315 (429)
Q Consensus 237 p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~ 315 (429)
.+ -.-..++ ..++-++|.+. +.+++.|-++.- ++-.+..+.++.. ..|+..+-+|++ .|.|.|.+.
T Consensus 197 ~S-aY~R~~D---YaR~R~Iad~~-gA~Lm~DMAHISgLVAA~vipsPFey------~DiVTTTTHKsL--RGPRg~mIF 263 (477)
T KOG2467|consen 197 TS-AYSRLID---YARFRKIADKV-GAYLMADMAHISGLVAAGVIPSPFEY------CDIVTTTTHKSL--RGPRGAMIF 263 (477)
T ss_pred cc-cchhhcc---HHHHHHHHHhc-CceeehhhhhHHHHHhcccCCCcccc------cceeeccccccc--cCCcceeEE
Confidence 11 1223344 67777888888 999999999864 3333333333322 238889999997 799999887
Q ss_pred cCHH---------------HHHHHHHHh-hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC
Q 014172 316 GPKH---------------FVAACNKIQ-SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE 379 (429)
Q Consensus 316 ~~~~---------------~~~~l~~~~-~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~ 379 (429)
..+- +-+.+.... .....+|......+.+.+|... ....+....++..++.+.+.++|.+.
T Consensus 264 yRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa--~tpefk~Yq~qV~~Nakala~~l~~~- 340 (477)
T KOG2467|consen 264 YRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQA--MTPEFKEYQKQVLKNAKALASALISR- 340 (477)
T ss_pred EeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhh--CCHHHHHHHHHHHHHHHHHHHHHHHc-
Confidence 5321 112222211 1223345555555566666643 23456778888888999999999988
Q ss_pred Cceeec-CCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 380 GVKMSE-PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 380 g~~~~~-p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
|.+++. ..-+..+.+++... + -...-+++.++..+|.++
T Consensus 341 Gy~lvtgGTDnHlvLvDLr~~-G----------~dGarvE~vle~~~I~~N 380 (477)
T KOG2467|consen 341 GYKLVTGGTDNHLVLVDLRPK-G----------VDGARVEKVLELCHIALN 380 (477)
T ss_pred CceEecCCccceEEEEecccc-C----------CchHHHHHHHHHhhhhhc
Confidence 888763 34456678888653 1 234566677777666553
No 384
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.72 E-value=7.2e-07 Score=81.79 Aligned_cols=299 Identities=13% Similarity=0.111 Sum_probs=166.6
Q ss_pred hHHHHHHHHHHHHcC--CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcC--CCCEEEEc
Q 014172 110 PVLIAEAGINAIREG--FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS--PGDEVIIP 185 (429)
Q Consensus 110 p~~v~~a~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~--~gd~Vlv~ 185 (429)
+|++.++....+..- ..++-. .+|.+-...... .. ..-+-++++++++++..++++...+ ...-|++-
T Consensus 63 hp~VV~A~~kQmat~~tN~RFlh----d~lv~cA~~l~s-tl---PeLsvc~F~NSGSEANDLALRLAR~ftkhqDvItl 134 (452)
T KOG1403|consen 63 HPEVVRAGAKQMATISTNNRFLH----DELVQCARTLTS-TL---PELSVCFFVNSGSEANDLALRLARNFTKHQDVITL 134 (452)
T ss_pred CHHHHHHHHHHHhHhcccchhhH----HHHHHHHHHHhh-cC---CCceEEEEecCCchhhHHHHHHHHhhcccCceEEE
Confidence 678888887766531 222211 233332222222 11 1235678999999999999887532 22345556
Q ss_pred CCCCCChHHH-HHHc------CC---EEEEe---cCCC------------C-CCCCCCHHHHHhhccc------CCcEEE
Q 014172 186 APFWVSYPEM-ARIA------DA---TPVIL---PTRI------------S-ENFLLDPKVLESKLTE------KSRLLI 233 (429)
Q Consensus 186 ~p~y~~~~~~-~~~~------g~---~~~~v---~~~~------------~-~~~~~d~e~l~~~l~~------~~~~i~ 233 (429)
+..|.++... .+.. |. ++.+| |+.. . +....-.+.+++.+++ +..+.+
T Consensus 135 dHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfi 214 (452)
T KOG1403|consen 135 DHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFI 214 (452)
T ss_pred echhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHH
Confidence 6666665432 2211 11 11111 2211 0 0001112344444432 222333
Q ss_pred EcCCCCCccCCCCHH-HHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceee
Q 014172 234 LCSPSNPTGSVYPKN-LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLG 312 (429)
Q Consensus 234 l~~p~NPtG~~~~~~-~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G 312 (429)
-.+-++-.|.++|+. ..+++++..+.+ +-+.|.||+.-+|..-|...+.+.-. +-+--+-++.|.+| .|..++
T Consensus 215 AEslQSCGGQiiPPagYFq~Va~~Vr~a-GGv~IaDEVQvGFGRvG~hyWafq~y----~fiPDIVtmgKpmG-NGhPVa 288 (452)
T KOG1403|consen 215 AESLQSCGGQIIPPAGYFQAVADAVRSA-GGVCIADEVQVGFGRVGSHYWAFQTY----NFIPDIVTMGKPMG-NGHPVA 288 (452)
T ss_pred HHHHHhcCCcccCchhHHHHHHHHHhcC-CCeEEeehhhhcccccchhhhhhhhh----ccccchheecccCC-CCCeee
Confidence 355577788888776 589999999999 77888899999875555544444322 22222566899999 999999
Q ss_pred EEEcCHHHHHHHHH--HhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeec--CCc
Q 014172 313 YIAGPKHFVAACNK--IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE--PQG 388 (429)
Q Consensus 313 ~v~~~~~~~~~l~~--~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~--p~~ 388 (429)
.+++.+++.+++.. +.-..+++.++.+.+++.+.++.- ..+.+.+..+..-+....+...++. ..++.. -..
T Consensus 289 ~VattkeIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~--e~E~Lq~ha~~vG~~L~~lL~~~k~--kh~~IGDvRGv 364 (452)
T KOG1403|consen 289 AVATTKEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVC--EDENLQEHAQQVGEKLEVLLRRLKQ--KHECIGDVRGV 364 (452)
T ss_pred EEeccHHHHHHhccccceehhccCCCchhHHHHHHHHHHH--hhhhHHHHHHHHHHHHHHHHHHHhh--hccceeccccc
Confidence 99999999999875 233345667888888888887741 1233444444444444444444433 122221 233
Q ss_pred eEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 389 AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 389 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
|.|+=+++-.-.. ..-.....+.-+..+|.+.++|++|
T Consensus 365 GLFiGIdLVkD~~---tRtP~tk~A~~~v~rlke~y~VLls 402 (452)
T KOG1403|consen 365 GLFIGIDLVKDRK---TRTPDTKEAHWVVNRLKELYRVLLS 402 (452)
T ss_pred eEEEeeeeecccc---cCCCcHHHHHHHHHHHHHhhhEEEe
Confidence 5667677632100 0000011345667788888888875
No 385
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.49 E-value=4.1e-05 Score=82.27 Aligned_cols=299 Identities=13% Similarity=0.118 Sum_probs=172.2
Q ss_pred HHHHHHHHHHhcCCC-eEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCC-----CCCHHHHHHHHHHHHhhcCCCCCC
Q 014172 82 AITDQATALAQAGVS-VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPN-----AGTLELRSAICHKLKEENGLSYTP 155 (429)
Q Consensus 82 ~~~~~~~~~~~~g~~-~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~-----~G~~~lr~~ia~~l~~~~g~~~~~ 155 (429)
++....+++..+.+. ..-++.|.=+.-+|..+.+.+.+.-. -++.|+|- +|..+..-.....+.+..|.++
T Consensus 65 e~~~~~~~~a~kN~~~~~fiG~G~y~~~~P~vi~~~i~~~~~-~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~v-- 141 (954)
T PRK12566 65 AALARLRGYAEQNQVWTSLIGMGYHGTVTPTVILRNVLENPG-WYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDL-- 141 (954)
T ss_pred HHHHHHHHHHhcCCCccccccccccCCcCcHHHHHHHHhCch-hhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchh--
Confidence 444555555444432 23455555444457767565554211 13556553 4554433333334444445433
Q ss_pred CcEEEecChHHHHHHHHHHhc---CCCCEEEEcCCCCCChHHHHH----HcCCEEEEecCCCCCCCCCCHHHHHhhcccC
Q 014172 156 DQILVSNGAKQSILQAVLAVC---SPGDEVIIPAPFWVSYPEMAR----IADATPVILPTRISENFLLDPKVLESKLTEK 228 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~---~~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~ 228 (429)
.|.-+-.|+|.+-+.++++.. .+..+|++++-.|+.+...++ ..|.+++. +++++.+..+
T Consensus 142 aNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~~~~ 208 (954)
T PRK12566 142 ANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLAAHA 208 (954)
T ss_pred hhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcCCCC
Confidence 355555566655554443331 224689999999988876554 45666654 2233345556
Q ss_pred CcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEe---ccChhcc
Q 014172 229 SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVN---GFSKAFA 305 (429)
Q Consensus 229 ~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~---S~SK~~~ 305 (429)
+.++++.+|+. .|.+-+ +++|.++++++ +.++| +.+.- + ...+..-++.++-+|+++ +|.=-+|
T Consensus 209 ~~~v~vq~P~~-~G~i~d---~~~i~~~~h~~-gal~~-~~~d~-l------aL~ll~~Pge~GADI~vG~~Q~fGvp~~ 275 (954)
T PRK12566 209 VFGALLQYPDT-HGEIRD---LRPLIDQLHGQ-QALAC-VAADL-L------SLLVLTPPGELGADVVLGSTQRFGVPMG 275 (954)
T ss_pred EEEEEEECCCC-ceEEcc---HHHHHHHHHHc-CCEEE-EEeCH-H------HHhCCCChhhcCCcEEeeCCCcCCCCCC
Confidence 77888889975 788865 99999999998 77765 22211 1 111222344566678777 4555566
Q ss_pred cccceeeEEEcCHHHHHHH----------------------------HHHhhcccCCCchHHHHHH--HHHHhcCCCChH
Q 014172 306 MTGWRLGYIAGPKHFVAAC----------------------------NKIQSQFTSGASSISQKAG--VAALGLGYAGGE 355 (429)
Q Consensus 306 ~~G~R~G~v~~~~~~~~~l----------------------------~~~~~~~~~~~~~~~q~aa--~~~l~~~~~~~~ 355 (429)
..|.-.||+.+.+++.+.+ ++-+...+.|++..-.+.+ ..+.-. +.+
T Consensus 276 ~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~---Gp~ 352 (954)
T PRK12566 276 YGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYH---GPE 352 (954)
T ss_pred CCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHh---ChH
Confidence 6778899998888776643 2333334445444333222 222222 467
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCee
Q 014172 356 VVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVL 427 (429)
Q Consensus 356 ~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~ 427 (429)
.++++.++...+..++.+.|.+. |+++... .||=-+.+.-. ....++.++.+++ ||-
T Consensus 353 Gl~~ia~~~~~~a~~l~~~l~~~-g~~~~~~--~fF~~~~v~~~-----------~~~~~~~~~a~~~-~~n 409 (954)
T PRK12566 353 GLKRIAQRVHRLTAILAAGLEAK-GIKRLNR--HFFDTLTLEVG-----------GAQAAIIESAEAA-RIN 409 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CCccccC--CccceEEEEcc-----------CCHHHHHHHHHHC-CCe
Confidence 88888888888999999999995 8886533 56644444210 1355666665554 553
No 386
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.38 E-value=5e-05 Score=73.20 Aligned_cols=267 Identities=18% Similarity=0.208 Sum_probs=158.5
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhc-------CCC-----CEEE-EcCCCC
Q 014172 123 EGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC-------SPG-----DEVI-IPAPFW 189 (429)
Q Consensus 123 ~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~-------~~g-----d~Vl-v~~p~y 189 (429)
.+...|--.++..-..+.+-..+.+..|++...+.|+.-.|+...++.+..+-- ..| +.|+ +++-+|
T Consensus 128 tn~~TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesH 207 (510)
T KOG0629|consen 128 TNMFTYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESH 207 (510)
T ss_pred CCCceEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccch
Confidence 334456555666556666667777777876655666666667777765544421 112 3444 456789
Q ss_pred CChHHHHHHcC---CEEEEecCCCCCCCCCCHHHHHhhccc-CCc----EEE-EcCCCCCccCCCCHHHHHHHHHHHHhC
Q 014172 190 VSYPEMARIAD---ATPVILPTRISENFLLDPKVLESKLTE-KSR----LLI-LCSPSNPTGSVYPKNLLDEIARIVAKH 260 (429)
Q Consensus 190 ~~~~~~~~~~g---~~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~----~i~-l~~p~NPtG~~~~~~~l~~I~~~a~~~ 260 (429)
.+...++..+| -.++.|+++.. +.+++++||+.|.. +.+ +++ .+...-..|+.=| +..|+++|++|
T Consensus 208 YSi~kaAa~lg~gtd~c~~v~t~e~--Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDd---L~~iadiC~k~ 282 (510)
T KOG0629|consen 208 YSIKKAAAFLGLGTDHCIKVKTDER--GKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDD---LNGIADICEKH 282 (510)
T ss_pred hhHHHHHHHhccCCceeEEeccccc--CccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCc---HHHHHHHHHhc
Confidence 99999999999 57888888753 45999999998743 222 332 3444566788777 99999999999
Q ss_pred CCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHH-HHHHHHHHhhcccCCC---c
Q 014172 261 PRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-FVAACNKIQSQFTSGA---S 336 (429)
Q Consensus 261 ~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~-~~~~l~~~~~~~~~~~---~ 336 (429)
++|+.+|.+|++...-...+... +.+...-.=+..+.+|.+| +.+.++..+...+ +...+.+....+-+.. -
T Consensus 283 -~lWmHvDAAwGGglLmS~k~R~k--l~Giera~SvtwnpHK~~g-aplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~Y 358 (510)
T KOG0629|consen 283 -KLWMHVDAAWGGGLLMSRKHRHK--LTGIERANSVTWNPHKLMG-APLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFY 358 (510)
T ss_pred -CEEEEeecccccccccChhhHhh--ccCccccCceeecHHHhhc-CcchhhHHHHHHHHHHHhhcccchhhhhccCcee
Confidence 99999999998743322222221 1111111134567789998 7777777666543 4444433221110000 0
Q ss_pred hHHHHHHHHHHhcC-------------CCChHHHHHHHHHHHHHHHHHHHHhccCCCceee---cCCceEEEEEecCC
Q 014172 337 SISQKAGVAALGLG-------------YAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS---EPQGAFYLFIDFST 398 (429)
Q Consensus 337 ~~~q~aa~~~l~~~-------------~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~---~p~~~~~~~~~l~~ 398 (429)
..+-.+....+..+ ..+...+++..+++-+..+++.+.+++-+|...+ .|+...+++-.+|.
T Consensus 359 dvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~ 436 (510)
T KOG0629|consen 359 DVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPP 436 (510)
T ss_pred ecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCch
Confidence 00011111111111 0123446778888889999999999997664432 35644444444444
No 387
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.04 E-value=0.00026 Score=68.61 Aligned_cols=272 Identities=18% Similarity=0.164 Sum_probs=147.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCcEEEecChHH-HHHHHHHHhc--CCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCC
Q 014172 136 ELRSAICHKLKEENGLSYTPDQILVSNGAKQ-SILQAVLAVC--SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISE 212 (429)
Q Consensus 136 ~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~-al~~~l~~l~--~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~ 212 (429)
.|...++..+-+..|.+ +-..+++.+.+|. .+.+.+.++. ..++.|+.+.-.+.+...++..+|++++.|+...++
T Consensus 56 ~ltn~l~~d~~~~~G~~-~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~ 134 (389)
T PF05889_consen 56 KLTNSLVLDALRLAGLR-SVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEG 134 (389)
T ss_dssp HHHHHHHHHHHHHTTHT-THCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEET
T ss_pred HHHHHHHHHHHHHcCCc-cccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCC
Confidence 34444554444556753 2356777776554 3334444443 457999999988888888999999999999964433
Q ss_pred C-CCCCHHHHHhhccc---CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCC
Q 014172 213 N-FLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 288 (429)
Q Consensus 213 ~-~~~d~e~l~~~l~~---~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~ 288 (429)
+ ...|.+.+++.+++ +..+.++++++---|...+ ++++|+++|++| |+..|+-.||+--.. ..-..+.+-.
T Consensus 135 d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D--~i~~IakiC~~~-~IPhlvNnAYgvQ~~--~~~~~i~~a~ 209 (389)
T PF05889_consen 135 DELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPD--DIEEIAKICKEY-DIPHLVNNAYGVQSS--KCMHLIQQAW 209 (389)
T ss_dssp TEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB------HHHHHHHHHHH-T--EEEEGTTTTT-H--HHHHHHHHHH
T ss_pred CeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCc--cHHHHHHHHHHc-CCceEEccchhhhHH--HHHHHHHHHH
Confidence 3 33467888877753 4456667776544555533 599999999999 999999999974100 0000000000
Q ss_pred CCCCceEEEeccChhcccccceeeEEEc-CHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 014172 289 GMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 367 (429)
Q Consensus 289 ~~~~~~i~~~S~SK~~~~~G~R~G~v~~-~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~ 367 (429)
......+++.|..|.|= -+..-+.+.+ .+..+..+.+.-....+ ..+........+.. +............+.
T Consensus 210 ~~GRvda~vqS~dkNF~-VPvGgai~As~~~~~i~~vs~~YpGRas--~sp~ld~~itLl~L---G~~g~~~ll~~r~~~ 283 (389)
T PF05889_consen 210 RVGRVDAFVQSTDKNFM-VPVGGAIMASFDPSGILAVSKEYPGRAS--ASPSLDLFITLLSL---GCTGYGALLKERKAS 283 (389)
T ss_dssp HHSTCSEEEEEHHHHHC-EESSHEEEEESSHHHHHHHHHTSHSHBT--SHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred hcCCcceeeeecCCCEE-ecCCCcEEEecCHHHHHHHHHHhhhhhh--cccchHHHHHHHHH---hhhHHHHHHHHHHHH
Confidence 00122378999999994 4444444444 45677777654322222 23334445555554 233444455555555
Q ss_pred HHHHHHHhccCC---Cceee-cCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCe
Q 014172 368 RDFLVKSFGELE---GVKMS-EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQV 426 (429)
Q Consensus 368 r~~l~~~L~~l~---g~~~~-~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV 426 (429)
..++.++|+++. +-.+. .|....-+.+.++....... .+...|...|..+ ||
T Consensus 284 f~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~~------k~~~~lgs~Lf~R-~V 339 (389)
T PF05889_consen 284 FPYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLYEISQ------KDGTFLGSMLFKR-GV 339 (389)
T ss_dssp HHHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCCS------SHHHHHHHHHHHT-TE
T ss_pred HHHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccchhhcc------chhhhHHHHHHhC-Cc
Confidence 555555555431 32332 35555556667765321000 1346777777665 65
No 388
>PLN02672 methionine S-methyltransferase
Probab=97.77 E-value=0.00099 Score=73.30 Aligned_cols=232 Identities=12% Similarity=0.143 Sum_probs=146.0
Q ss_pred eEEcCCCCCCCCC-hHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHH
Q 014172 97 VIRLAAGEPDFDT-PVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (429)
Q Consensus 97 ~i~L~~g~~~~~~-p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 174 (429)
.+||+..+-.... --.++..+...++.. ..-|.|+.|...+|..||.++...+++++++++|++.++-..++..+++.
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (1082)
T PLN02672 389 SLDLSFEDESVADEKIPFLAYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRL 468 (1082)
T ss_pred hccccccccccchhhccHHHHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHh
Confidence 4555544422211 112556666666543 56788999999999999999999999999999999999999999777765
Q ss_pred h------cCCCCEEEEcCCCCCChHHHHHHcC--------CEEEEecCCCCCCCCCCHHHHHhhccc-CCcEEEEcCCCC
Q 014172 175 V------CSPGDEVIIPAPFWVSYPEMARIAD--------ATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSN 239 (429)
Q Consensus 175 l------~~~gd~Vlv~~p~y~~~~~~~~~~g--------~~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~p~N 239 (429)
+ ++.+-+-.++. . |...+...| ..+..+.-.. ..+.+.+.++. ++++|+..-.+
T Consensus 469 ~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~- 537 (1082)
T PLN02672 469 FSPRLAIVDEHLTRWLPK-K---WLTSLAIENATSDSKSDDVITVIEAPR------QSDLVIELIKKLKPQVVVTGMAD- 537 (1082)
T ss_pred hChHHHhhhhhhhccCCH-H---HHhHhhhhcccccCccCCeEEEEeCCC------cchHHHHHHHhCCCeEEEEeccc-
Confidence 4 55554443332 2 222222222 2333332111 11233444433 66777643332
Q ss_pred CccCCCCHHHHHHHHHHHHhCCCeEEEEccC-CcccccCCCCCCccccCC--CCCCceEEEeccChhcccccceeeEEEc
Q 014172 240 PTGSVYPKNLLDEIARIVAKHPRLLVLSDEI-YEHIIYAPATHTSFASLP--GMWERTLTVNGFSKAFAMTGWRLGYIAG 316 (429)
Q Consensus 240 PtG~~~~~~~l~~I~~~a~~~~~i~vi~Dea-y~~~~~~~~~~~~~~~~~--~~~~~~i~~~S~SK~~~~~G~R~G~v~~ 316 (429)
+-..+....+.|.+.+++. |.+++.|.. |-++.-.+....-+..+. ....+..++..+-|.--.+.+-+.+++.
T Consensus 538 --~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (1082)
T PLN02672 538 --FEMRTSTAFEHLLNVTAEI-GARLFLDISDHLELSSLPGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFVIS 614 (1082)
T ss_pred --hhhhhHHHHHHHHHHHHhh-CcEEEEehhhheeeccCCCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEEec
Confidence 2233555689999999999 999999976 444443333222222221 2245556778888888789999999986
Q ss_pred -CHHHHHHHHHHhhcccCCCchHHHHH
Q 014172 317 -PKHFVAACNKIQSQFTSGASSISQKA 342 (429)
Q Consensus 317 -~~~~~~~l~~~~~~~~~~~~~~~q~a 342 (429)
++.+...+.+......+.++.++|..
T Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (1082)
T PLN02672 615 ENEAVLKALSKTGEVLEGRTAIISQFY 641 (1082)
T ss_pred CcHHHHHHHHHHHHhhccchHHHHHHH
Confidence 55677778776666666677777743
No 389
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.73 E-value=0.0048 Score=59.01 Aligned_cols=291 Identities=9% Similarity=0.111 Sum_probs=155.6
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcCCCC--CC-----C-CCCCHHHHHHHHHHHHhhcCCCCCCCcEEEec-ChHHH
Q 014172 97 VIRLAAGEPDFDTPVLIAEAGINAIREGFTR--YT-----P-NAGTLELRSAICHKLKEENGLSYTPDQILVSN-GAKQS 167 (429)
Q Consensus 97 ~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~--Y~-----~-~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~-G~~~a 167 (429)
..+|+.|-.- .|+++++.+.+.+.+ +.+ ++ . +.-..++.+...+.+.+.++++-+ -.|++.. |++..
T Consensus 6 ~~nFsaGPa~--lp~~vL~~a~~e~~~-~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~-Y~VlflqGGat~q 81 (365)
T COG1932 6 VYNFSAGPAA--LPPEVLQQAQKELLD-WNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDD-YKVLFLQGGATGQ 81 (365)
T ss_pred CCCCCCCccc--CCHHHHHHHHHHHhh-hccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCC-ceEEEEcCccHHH
Confidence 5677777644 356666666655433 111 11 0 111245556666777777786533 3565554 57888
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCCChH-HHHHHcCCEEEEecCC-CCC--CCCCCHHHHHhhcccCCcEEEEcCCCCCccC
Q 014172 168 ILQAVLAVCSPGDEVIIPAPFWVSYP-EMARIADATPVILPTR-ISE--NFLLDPKVLESKLTEKSRLLILCSPSNPTGS 243 (429)
Q Consensus 168 l~~~l~~l~~~gd~Vlv~~p~y~~~~-~~~~~~g~~~~~v~~~-~~~--~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~ 243 (429)
..++...|+.....=.+..-.|.... ..++..+-.+...... .+. +..++++... +.++..-|.+|.-.--+|+
T Consensus 82 f~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~NeTi~Gv 159 (365)
T COG1932 82 FAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNETISGV 159 (365)
T ss_pred HHHHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cCCCccEEEEecCCcccce
Confidence 88888888866533123344444322 3344444322222211 112 2233444332 2333333555554456777
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHH
Q 014172 244 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA 323 (429)
Q Consensus 244 ~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~ 323 (429)
-++.. .. +. ++.++|.|..-.-+. ....+..+ .++..+.-|.+|..| ++.++.+++++++
T Consensus 160 ~v~~~--p~---~~---~~~~~v~D~SS~ils----r~iDvsk~------dviyagaQKnlGpaG--ltvvIvr~~~l~r 219 (365)
T COG1932 160 EVPEL--PD---IG---SDGLLVADASSAILS----RPIDVSKY------DVIYAGAQKNLGPAG--LTVVIVRPDLLER 219 (365)
T ss_pred EccCC--CC---CC---CCceEEEecccHHhc----CCCChhHc------ceEEEehhhccCccc--eEEEEEcHHHHhc
Confidence 76621 10 10 136788887665432 22233333 377888999999777 8999999999888
Q ss_pred HHHH-------------hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCcee---ecCC
Q 014172 324 CNKI-------------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM---SEPQ 387 (429)
Q Consensus 324 l~~~-------------~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~---~~p~ 387 (429)
+... .....-+|+.++.+.....++--. ..-.++.+.++-+++.+.+++.+++-+-... ....
T Consensus 220 ~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk-~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~~R 298 (365)
T COG1932 220 AESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLK-SQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAKANR 298 (365)
T ss_pred ccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHHHHhCCccccccchhhc
Confidence 7553 111222345555444433332100 1223667778888899999999987521111 1345
Q ss_pred ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCC
Q 014172 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQ 425 (429)
Q Consensus 388 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~g 425 (429)
+-|-+.+++... .=+..|..++.+++.
T Consensus 299 S~mnV~f~~~~~-----------~ld~~fv~eae~~gl 325 (365)
T COG1932 299 SRMNVTFTLVDA-----------ELDKGFVAEAEAAGL 325 (365)
T ss_pred cceeEEEEcCcH-----------HHHHHHHHHHHHcCC
Confidence 567777877642 124566766665533
No 390
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.66 E-value=0.0015 Score=61.75 Aligned_cols=161 Identities=19% Similarity=0.230 Sum_probs=87.8
Q ss_pred CHHHHHhhccc-----CCcEEEEcCC-CCCcc-CCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCC----CCCCccc
Q 014172 217 DPKVLESKLTE-----KSRLLILCSP-SNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP----ATHTSFA 285 (429)
Q Consensus 217 d~e~l~~~l~~-----~~~~i~l~~p-~NPtG-~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~----~~~~~~~ 285 (429)
.++++++.|.. ++.+-+|..| +...| ...+++..+.|-++|++| ++..|+||++.+..-.| +.++.+.
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh-~v~fivDEVQTGgGaTGk~WaHehw~l~ 332 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKH-GVAFIVDEVQTGGGATGKFWAHEHWNLD 332 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhc-CeEEEeeeeecCCCccCceeeehhcCCC
Confidence 46666766642 3444455555 66555 567889999999999999 99999999988643222 1222222
Q ss_pred cCCCCCCceEEEeccChhcccccceeeEEEcCHHHHH-HHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 014172 286 SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVA-ACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 364 (429)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~-~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~ 364 (429)
+- .-+-+|||-|- .| ||... ++++. .-.++-..|..-+....+ +..+++. -.-+.+.+..
T Consensus 333 ~P-------pD~vTFSKK~q-~g---Gffh~-~~frpn~pYrifNTWmGdP~k~ll--l~~vv~~-----I~~~~Ll~n~ 393 (484)
T KOG1405|consen 333 SP-------PDVVTFSKKFQ-TG---GFFHD-EEFRPNEPYRIFNTWMGDPSKNLL--LEEVVQE-----IKREDLLNNV 393 (484)
T ss_pred CC-------ccceehhhhhh-cC---ccccC-cccCCCchHHHhhhhcCChHHHHH--HHHHHHH-----HhHHHHHHHH
Confidence 21 22667999995 66 66543 33322 223333333322332222 1222221 0012333444
Q ss_pred HHHHHHHHHHhccC----CC-ceeecCCceEEEEEecCC
Q 014172 365 RERRDFLVKSFGEL----EG-VKMSEPQGAFYLFIDFST 398 (429)
Q Consensus 365 ~~~r~~l~~~L~~l----~g-~~~~~p~~~~~~~~~l~~ 398 (429)
+..-+.+..+|.++ || +.-.+..|.| +..++|.
T Consensus 394 ~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF-~a~d~ps 431 (484)
T KOG1405|consen 394 AHVGKALLKGLLELQAKYPGKINNLRGRGTF-IAWDCPS 431 (484)
T ss_pred HHHHHHHHHHHHHHHHhCchhhhcccccceE-EEEeCCC
Confidence 44555666665543 54 4444666766 6677775
No 391
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=97.62 E-value=0.00075 Score=65.95 Aligned_cols=142 Identities=17% Similarity=0.193 Sum_probs=99.6
Q ss_pred CCCCCHHHHHHHHHHHHhhcCCCC--------CCCcEEEecChHHHHHHHHHHh------cCCCC------------EEE
Q 014172 130 PNAGTLELRSAICHKLKEENGLSY--------TPDQILVSNGAKQSILQAVLAV------CSPGD------------EVI 183 (429)
Q Consensus 130 ~~~G~~~lr~~ia~~l~~~~g~~~--------~~~~i~~t~G~~~al~~~l~~l------~~~gd------------~Vl 183 (429)
..+-..||..-+.+|+.+..+++- +.--|+.++.+...+-.++.+- ++.+. .+.
T Consensus 107 ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y 186 (511)
T KOG0628|consen 107 SSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAY 186 (511)
T ss_pred cCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEE
Confidence 445568999999999999887541 1224555555444444444331 22221 356
Q ss_pred EcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccC-Cc----EEEEcCCCCCccCCCCHHHHHHHHHHHH
Q 014172 184 IPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEK-SR----LLILCSPSNPTGSVYPKNLLDEIARIVA 258 (429)
Q Consensus 184 v~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~-~~----~i~l~~p~NPtG~~~~~~~l~~I~~~a~ 258 (429)
+.+.++.+....+...|++.+.++.+. |+.++.+.|++++.++ .+ .+++. +--|-.+..-+++.+|..+|+
T Consensus 187 ~SDqahssveka~~i~~VklR~l~td~--n~~mr~~~L~~AIe~D~arGlIPf~v~a--t~GTT~~ca~D~l~elg~Vc~ 262 (511)
T KOG0628|consen 187 CSDQAHSSVEKACLIAGVKLRALPTDE--NFGMRGDTLRKAIEEDIARGLIPFFVCA--TLGTTSSCAFDELEELGPVCR 262 (511)
T ss_pred ecCcccchHHHhHhhcceeEEEeeccc--CcCCCHHHHHHHHHHHHhCCCccEEEEE--eecCccccccccHHHhcchhh
Confidence 778899999999999999999999864 8999999999999752 12 22222 222333446677999999999
Q ss_pred hCCCeEEEEccCCccccc
Q 014172 259 KHPRLLVLSDEIYEHIIY 276 (429)
Q Consensus 259 ~~~~i~vi~Deay~~~~~ 276 (429)
++ ++|+.+|.+|++-.+
T Consensus 263 ~~-glWLHVDAAYAGsa~ 279 (511)
T KOG0628|consen 263 EE-GLWLHVDAAYAGSAF 279 (511)
T ss_pred hc-CEEEEeehhhccccc
Confidence 99 999999999996443
No 392
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=97.42 E-value=0.017 Score=53.82 Aligned_cols=212 Identities=12% Similarity=0.102 Sum_probs=131.5
Q ss_pred hcCCCeEEcCCCCCCCCChHHHHHHHHHHHHc--CCCCCCCCCCC---HHHHHHHHHHHHhhcCCCCCCCcEEEecChHH
Q 014172 92 QAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE--GFTRYTPNAGT---LELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (429)
Q Consensus 92 ~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~--~~~~Y~~~~G~---~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~ 166 (429)
..+.+.|.|..|...+. |....+.+.+.+.. ...-|+...|. ...-+-+-..++...| ...++|.+.++-|.
T Consensus 63 ~~d~~~iYlcGNSLGLm-PK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iVG--A~e~EvavmNsLTv 139 (465)
T KOG3846|consen 63 SDDKPVIYLCGNSLGLM-PKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIVG--AQENEVAVMNSLTV 139 (465)
T ss_pred CCCCCeEEEeccccccC-chhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhcc--CCchhhhhHhhhhh
Confidence 45667899988776654 44444444443321 11222222221 1112223333333344 46789999999999
Q ss_pred HHHHHHHHhcCCC---CEEEEcCCCCCCh----HHHHHHcCCEEE--EecCCC-CCCCCCCHHHHHhhccc---CCcEEE
Q 014172 167 SILQAVLAVCSPG---DEVIIPAPFWVSY----PEMARIADATPV--ILPTRI-SENFLLDPKVLESKLTE---KSRLLI 233 (429)
Q Consensus 167 al~~~l~~l~~~g---d~Vlv~~p~y~~~----~~~~~~~g~~~~--~v~~~~-~~~~~~d~e~l~~~l~~---~~~~i~ 233 (429)
.+..++..+.+|- -+|+++.-+|++- ...+++.|..+. .+-+.+ ++...+..|++.+.|+. ...+|+
T Consensus 140 Nlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~ 219 (465)
T KOG3846|consen 140 NLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVC 219 (465)
T ss_pred HHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcCCeEEEEE
Confidence 9999999998875 3699998888863 356677787642 122222 34445778888888864 344556
Q ss_pred EcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccccc-ceee
Q 014172 234 LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLG 312 (429)
Q Consensus 234 l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~R~G 312 (429)
+...+.-||..++ +.+|-..-+. +|++|=.|-+++. |. .++ .+ ..|+..+.|+.--|.+. +| -.+|
T Consensus 220 fSGvqyYTGQ~Fd---i~aIT~Agq~-kgc~VGfDLAHAv----gN--VpL-~L-HdWgVDFACWCSYKYln-aGaGgIg 286 (465)
T KOG3846|consen 220 FSGVQYYTGQYFD---IGAITFAGQF-KGCLVGFDLAHAV----GN--VPL-QL-HDWGVDFACWCSYKYLN-AGAGGIG 286 (465)
T ss_pred eecceeecccccc---hhhhhhcccC-CCcEechhhhhhh----cC--Cce-EE-eecCCceEEEeeecccc-cCCCccc
Confidence 7888999999999 8888844444 4999999999875 22 122 12 13788888988888875 33 2345
Q ss_pred EEEcCHH
Q 014172 313 YIAGPKH 319 (429)
Q Consensus 313 ~v~~~~~ 319 (429)
-+...++
T Consensus 287 GlFvHek 293 (465)
T KOG3846|consen 287 GLFVHEK 293 (465)
T ss_pred eeeeehh
Confidence 5554443
No 393
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=96.83 E-value=0.0045 Score=56.37 Aligned_cols=202 Identities=18% Similarity=0.176 Sum_probs=108.2
Q ss_pred HHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhc--CCC-CEEEEcCCCCCChHHHHHHcCCEEEEecCCCCC-CC
Q 014172 139 SAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC--SPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISE-NF 214 (429)
Q Consensus 139 ~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~--~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~~ 214 (429)
..++...-...|+..-.+.+++--.+-..+.+.+..+. +|. ..|+-+.-.-.+....+-.+|.+++.+.--.++ ..
T Consensus 60 ne~a~~~i~l~glhav~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l 139 (432)
T KOG3843|consen 60 NEFAKDAIHLAGLHAVANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDEL 139 (432)
T ss_pred HHHHHHHHHHhhhhhhhceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHH
Confidence 33444333344554333444433333334555555553 343 445555544445556667789998887533332 23
Q ss_pred CCCHHHHHhhccc-CCc-EEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCC
Q 014172 215 LLDPKVLESKLTE-KSR-LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 292 (429)
Q Consensus 215 ~~d~e~l~~~l~~-~~~-~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~ 292 (429)
.-|++.+++.+++ ... .+++.+... .=+.-+++.+++|+.+|..| ++.-|+..+|+.-. .....-++.-. ..+
T Consensus 140 ~tdleav~~~iee~g~dcilci~stts-cfapr~pd~leaiaaica~~-diphivnnayglqs--ee~i~~iaa~~-~~g 214 (432)
T KOG3843|consen 140 ITDLEAVEAIIEELGEDCILCIHSTTS-CFAPRSPDNLEAIAAICAAH-DIPHIVNNAYGLQS--EECIHKIAAAA-ECG 214 (432)
T ss_pred HHhHHHHHHHHHHhCCceEEEEeeccc-ccCCCCCchHHHHHHHHHcc-Cchhhhccccccch--HHHHHHHHHHh-hhc
Confidence 3478888888765 333 333422211 11222567799999999999 99999999997421 00000111111 112
Q ss_pred c-eEEEeccChhcccccceeeEEEc--CHHHHHHHHHHhhcccCCCchHHHHHHHHHHhc
Q 014172 293 R-TLTVNGFSKAFAMTGWRLGYIAG--PKHFVAACNKIQSQFTSGASSISQKAGVAALGL 349 (429)
Q Consensus 293 ~-~i~~~S~SK~~~~~G~R~G~v~~--~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~ 349 (429)
| .-++.|+.|.|-+|= .|.+++ .+.+++.+.+.-....+..++ .......|..
T Consensus 215 rida~vqsldknf~vpv--ggaiia~fk~n~iq~iak~ypgrasa~ps--~dllitll~~ 270 (432)
T KOG3843|consen 215 RIDAFVQSLDKNFMVPV--GGAIIAAFKDNFIQEIAKMYPGRASASPS--LDLLITLLSL 270 (432)
T ss_pred cHHHHHHHhhhcceeec--chhHhhHhHHHHHHHHHHhCCCccccCcc--HHHHHHHHHh
Confidence 2 246889999996442 144443 567888877764433333333 3344444544
No 394
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=96.62 E-value=0.16 Score=52.23 Aligned_cols=293 Identities=14% Similarity=0.210 Sum_probs=149.1
Q ss_pred HHHHHHHHHHhcCCCeEE--cCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCC-----CCHH----HHHHHHHHHHhhcC
Q 014172 82 AITDQATALAQAGVSVIR--LAAGEPDFDTPVLIAEAGINAIREGFTRYTPNA-----GTLE----LRSAICHKLKEENG 150 (429)
Q Consensus 82 ~~~~~~~~~~~~g~~~i~--L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~-----G~~~----lr~~ia~~l~~~~g 150 (429)
++.+....+..+.+ ++. .+.|.=..-.|+.+.+.+.+.-.. .++|+|-+ |..| +...|++. -|
T Consensus 104 eml~~l~~ia~kNk-~~ksfIGmGYyn~~vP~~I~RNilenp~W-~TqYTPYQ~EIsQGRLEsllNyQTmi~dl----TG 177 (1001)
T KOG2040|consen 104 EMLQHLEDIASKNK-IWKSFIGMGYYNTHVPAVILRNILENPGW-YTQYTPYQAEISQGRLESLLNYQTMITDL----TG 177 (1001)
T ss_pred HHHHHHHHHHhhhh-HHHHhhccccccccCcHHHHHHhhhCCcc-eeccCCCchhhhhhhHHHHhhhHHhhhhc----cC
Confidence 44444444443332 333 233333333477776655543211 36677643 3222 22233333 35
Q ss_pred CCCCCCcE-EEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHH----cCCEEEEecCCCCCCCCCCHHHHHhhc
Q 014172 151 LSYTPDQI-LVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI----ADATPVILPTRISENFLLDPKVLESKL 225 (429)
Q Consensus 151 ~~~~~~~i-~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~e~l~~~l 225 (429)
+++ .|. ++--|+..+-.+++..-..++.+.++...+|+.....++. .|.+++.. |+++....
T Consensus 178 L~~--aNASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~----------~~~~~~~s- 244 (1001)
T KOG2040|consen 178 LPM--ANASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVS----------DIKEADYS- 244 (1001)
T ss_pred Ccc--cchhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhccccccceeEEec----------CHHHhhcc-
Confidence 433 233 3334443333333333355677899999999988876653 23333222 33333221
Q ss_pred ccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEecc---Ch
Q 014172 226 TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGF---SK 302 (429)
Q Consensus 226 ~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~---SK 302 (429)
.++...+++-.|.. -|.+.+ +.++++.+++. +.+++.--- + ....+..-++.++..|.++|- .-
T Consensus 245 ~~~v~gvlvQYP~t-~G~i~d---~~el~~~a~~~-~s~vv~atD---L-----LaLtiLrpPgefGaDIavGSsQRFGV 311 (1001)
T KOG2040|consen 245 SKDVSGVLVQYPDT-EGSVLD---FDELVELAHAN-GSLVVMATD---L-----LALTILRPPGEFGADIAVGSSQRFGV 311 (1001)
T ss_pred ccceeEEEEEcCCC-CCcccC---HHHHHHHhhcc-CceEEEeeh---h-----hHHHccCChhhcCceeeeccccccCc
Confidence 23466777777765 688888 88888999887 766653211 1 112333345556777888874 33
Q ss_pred hcccccceeeEEEcCHHHHHHH----------------------------HHHhhcccCCCch--HHHHHHHHHHhcCCC
Q 014172 303 AFAMTGWRLGYIAGPKHFVAAC----------------------------NKIQSQFTSGASS--ISQKAGVAALGLGYA 352 (429)
Q Consensus 303 ~~~~~G~R~G~v~~~~~~~~~l----------------------------~~~~~~~~~~~~~--~~q~aa~~~l~~~~~ 352 (429)
-+|..|.-.||..+.+++.+.+ ++-+...+.|+.. ++-.++..++-.
T Consensus 312 PlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYH--- 388 (1001)
T KOG2040|consen 312 PLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYH--- 388 (1001)
T ss_pred cccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhc---
Confidence 3343444455544444433321 1111112222211 112222223323
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHh
Q 014172 353 GGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDK 423 (429)
Q Consensus 353 ~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~ 423 (429)
+.+.++++.++.....-++..+|+.. |-++. .-.||=.+++.-. .+.+++.++..++
T Consensus 389 Gp~gL~~IArrvh~~T~~l~~~l~~a-ghel~--~k~fFDTLkI~~~-----------~s~~~~l~rA~~~ 445 (1001)
T KOG2040|consen 389 GPHGLKEIARRVHNLTLILAEGLKNA-GHELQ--HKPFFDTLKIRCG-----------CSAEEVLDRAAKR 445 (1001)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhc-chhhc--cccccceEEEEec-----------CcHHHHHHHHHhh
Confidence 46778888888888888999999876 64443 2226655555311 1456666666554
No 395
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=96.45 E-value=0.34 Score=49.88 Aligned_cols=169 Identities=22% Similarity=0.256 Sum_probs=111.0
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecC-hH----HHHHHHHHHh-cCCC----CEEEEcCCCCCChHHHHHHcCC
Q 014172 132 AGTLELRSAICHKLKEENGLSYTPDQILVSNG-AK----QSILQAVLAV-CSPG----DEVIIPAPFWVSYPEMARIADA 201 (429)
Q Consensus 132 ~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G-~~----~al~~~l~~l-~~~g----d~Vlv~~p~y~~~~~~~~~~g~ 201 (429)
+|+.++.+.+.++|...-|. +++.+.+. +. .++. ++++. ..+| ...|+|...|..-...+.++|.
T Consensus 578 qGY~~lf~~Le~~Lc~iTG~----D~~s~QPNsGA~GEYaGL~-~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Magm 652 (1001)
T KOG2040|consen 578 QGYQQLFTELEKDLCEITGF----DSFSLQPNSGAQGEYAGLR-VIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGM 652 (1001)
T ss_pred hhHHHHHHHHHHHhheeecc----cceeecCCCCcccchhhHH-HHHHHHHhccCCcceeEEEeecccCCChhhHHhcCC
Confidence 68888888898888876663 34544432 22 2333 34443 3344 3578888899999999999999
Q ss_pred EEEEecCCCCCCCCCCHHHHHhhccc---CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCc----cc
Q 014172 202 TPVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE----HI 274 (429)
Q Consensus 202 ~~~~v~~~~~~~~~~d~e~l~~~l~~---~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~----~~ 274 (429)
+++.|.++.. +.+|..+|++..++ +-.++.++.|+- -|.. ++.+++++++.++| |--|..|.+-- ++
T Consensus 653 kvvpV~~~~~--G~id~~dLk~kaekh~~~Laa~MvTYPST-~Gvf--E~~i~d~cd~iHeh-GGQVYlDGANMNAqVGl 726 (1001)
T KOG2040|consen 653 KVVPVGCDAN--GNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVF--EEGIDDICDIIHEH-GGQVYLDGANMNAQVGL 726 (1001)
T ss_pred EEEEeeccCC--CCccHHHHHHHHHHhhhhhheeEEecccc-cccc--cccHHHHHHHHHhc-CCEEEecCCCccceecc
Confidence 9999998754 45999999887654 456777888864 2333 34599999999999 88888897643 22
Q ss_pred ccCCCCCCccccCCCCCCceEEEeccChhccc----ccceeeEEEcCHHHHH
Q 014172 275 IYAPATHTSFASLPGMWERTLTVNGFSKAFAM----TGWRLGYIAGPKHFVA 322 (429)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~----~G~R~G~v~~~~~~~~ 322 (429)
+. +++.+..+.=--++|+|.+ .|..+|=+-..+.++.
T Consensus 727 c~-----------pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLap 767 (1001)
T KOG2040|consen 727 CR-----------PGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAP 767 (1001)
T ss_pred cC-----------CccccccceeecccceeeecCCCCCCCCCccchhhhccc
Confidence 21 1223333444557787754 3444555544444443
No 396
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=88.58 E-value=19 Score=33.89 Aligned_cols=278 Identities=12% Similarity=0.115 Sum_probs=140.1
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCC--------CCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTP--------NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~--------~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~ 166 (429)
..+|+|+.|..- .|..|+..+.+.+-+ +.+-+- +.....+.+.-...+.+.++++-+-+-+++..|+|.
T Consensus 6 ~~vvnFaaGPAk--lp~~VL~e~qkdl~n-~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~ 82 (370)
T KOG2790|consen 6 ERVVNFAAGPAK--LPESVLLEAQKDLLN-FNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTG 82 (370)
T ss_pred cceeecCCCccc--CCHHHHHHHHHHhhc-cCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCcc
Confidence 358999888654 355555544443322 111100 111233444444555556665422233455566777
Q ss_pred HHHHHHHHhc--CCC---CEEEEcCCCCCChHHHHHHcCCEEEEecCCCCC-CCCCCHHHHHhhcccCCcEEEEcCCCCC
Q 014172 167 SILQAVLAVC--SPG---DEVIIPAPFWVSYPEMARIADATPVILPTRISE-NFLLDPKVLESKLTEKSRLLILCSPSNP 240 (429)
Q Consensus 167 al~~~l~~l~--~~g---d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~d~e~l~~~l~~~~~~i~l~~p~NP 240 (429)
-...+...++ +-| |-|+.-.=+--.+.++-+......+..+..... +-.+|.+..+. +++.+.+++|.----
T Consensus 83 qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~--~~da~yvyyCaNETV 160 (370)
T KOG2790|consen 83 QFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWEL--NPDASYVYYCANETV 160 (370)
T ss_pred cccccchhhhccccCCccceEEeccccHHHHHHHHhhCCceEEeccccccccCcCCChhhccc--CCCccEEEEecCcee
Confidence 7766666665 344 556544422223445444444444444443222 12345544432 455667777765444
Q ss_pred ccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHH
Q 014172 241 TGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF 320 (429)
Q Consensus 241 tG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~ 320 (429)
-|+-++.- - +-.-+ +.+++.|-.-.++. .+..+.. ..+++..--|.+|.+|. -.++..+++
T Consensus 161 HGVEf~~~-----P-~~~~~-~~vlVaDmSSnflS----rpvDvsk------~gvi~aGAQKN~G~aG~--Tvvivr~dl 221 (370)
T KOG2790|consen 161 HGVEFDFI-----P-VNDPK-GAVLVADMSSNFLS----RPVDVSK------FGVIFAGAQKNVGPAGV--TVVIVRKDL 221 (370)
T ss_pred eceecCCC-----C-CCCCC-CceEEEecccchhc----CCccchh------cceEEeccccccCcccc--EEEEEehhh
Confidence 56555411 0 11123 77788887655432 2223322 23778888999997874 446667776
Q ss_pred HHHHHHHh------------hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceee--cC
Q 014172 321 VAACNKIQ------------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS--EP 386 (429)
Q Consensus 321 ~~~l~~~~------------~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~--~p 386 (429)
+....... ....-.++.++.++.--.++.- ...-.+..+.+.-.+..+.+++.+.+..|+-.. .|
T Consensus 222 lg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~i-l~~GGl~a~e~~n~~KskllYd~iD~s~gfy~cpVe~ 300 (370)
T KOG2790|consen 222 LGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWI-LEKGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCPVEP 300 (370)
T ss_pred hcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHH-HhcccHHHHHHHHHHHHHHHHHHHHhcCCeEEcccch
Confidence 65433221 1111234544444333322210 002235667777788889999999886564322 22
Q ss_pred --CceEEEEEecC
Q 014172 387 --QGAFYLFIDFS 397 (429)
Q Consensus 387 --~~~~~~~~~l~ 397 (429)
.+-|-+.+++.
T Consensus 301 ~~RS~MNV~Fri~ 313 (370)
T KOG2790|consen 301 SVRSRMNVPFRIE 313 (370)
T ss_pred hhhhhcccceeec
Confidence 23455556664
No 397
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=87.09 E-value=5.5 Score=35.92 Aligned_cols=99 Identities=20% Similarity=0.220 Sum_probs=66.8
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCEE---EEcCC-C---CC-------ChHHHHHHcCCEEEEecCCCCCCCCCCHHHHH
Q 014172 157 QILVSNGAKQSILQAVLAVCSPGDEV---IIPAP-F---WV-------SYPEMARIADATPVILPTRISENFLLDPKVLE 222 (429)
Q Consensus 157 ~i~~t~G~~~al~~~l~~l~~~gd~V---lv~~p-~---y~-------~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~ 222 (429)
-+.+-+|+..+..++..++ +.|-.| +...| . |. .....++..|..++.....-+ ..-..++|.
T Consensus 3 ~~aL~SGGKDS~~Al~~a~-~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~--~e~eve~L~ 79 (223)
T COG2102 3 VIALYSGGKDSFYALYLAL-EEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGE--EEREVEELK 79 (223)
T ss_pred EEEEEecCcHHHHHHHHHH-HcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCcc--chhhHHHHH
Confidence 3677789988887665554 455322 22222 1 11 123456778999888887532 224677787
Q ss_pred hhccc-CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE
Q 014172 223 SKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (429)
Q Consensus 223 ~~l~~-~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi 266 (429)
+++.. +...|+ +|.+++..+..++-.+|++- ++.++
T Consensus 80 ~~l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~l-Gl~~~ 116 (223)
T COG2102 80 EALRRLKVDGIV-------AGAIASEYQKERVERLCEEL-GLKVY 116 (223)
T ss_pred HHHHhCcccEEE-------EchhhhHHHHHHHHHHHHHh-CCEEe
Confidence 77764 455776 89999999999999999999 88776
No 398
>PLN02591 tryptophan synthase
Probab=78.75 E-value=56 Score=30.35 Aligned_cols=167 Identities=16% Similarity=0.137 Sum_probs=102.7
Q ss_pred HHHHHHHHhcCCCeEEcCCCCCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEec
Q 014172 84 TDQATALAQAGVSVIRLAAGEPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSN 162 (429)
Q Consensus 84 ~~~~~~~~~~g~~~i~L~~g~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~ 162 (429)
.+.++.+.+.|.++|-|+.-.++.-. -|.+.++..++++++.+ ...+.+.+.+.- +....+ =|++|=
T Consensus 19 ~~~~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~-------~~~~~~~~~~~r-~~~~~p----~ilm~Y 86 (250)
T PLN02591 19 AEALRLLDACGADVIELGVPYSDPLADGPVIQAAATRALEKGTT-------LDSVISMLKEVA-PQLSCP----IVLFTY 86 (250)
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCcccCHHHHHHHHHHHHcCCC-------HHHHHHHHHHHh-cCCCCC----EEEEec
Confidence 34566677788899998876655333 36778888888876431 234444444432 111211 133322
Q ss_pred C---hHHHHHHHHHHhcCCC-CEEEEcCCCCC---ChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEc
Q 014172 163 G---AKQSILQAVLAVCSPG-DEVIIPAPFWV---SYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC 235 (429)
Q Consensus 163 G---~~~al~~~l~~l~~~g-d~Vlv~~p~y~---~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~ 235 (429)
- -.-++...+..+.+.| |.|++++--+. .+...++..|...+.+=.. + .+.+.+++........||+.
T Consensus 87 ~N~i~~~G~~~F~~~~~~aGv~GviipDLP~ee~~~~~~~~~~~gl~~I~lv~P--t---t~~~ri~~ia~~~~gFIY~V 161 (250)
T PLN02591 87 YNPILKRGIDKFMATIKEAGVHGLVVPDLPLEETEALRAEAAKNGIELVLLTTP--T---TPTERMKAIAEASEGFVYLV 161 (250)
T ss_pred ccHHHHhHHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCC--C---CCHHHHHHHHHhCCCcEEEe
Confidence 1 1235555666666777 89999986654 3445677889888776432 2 25566777666667788876
Q ss_pred CCCCCccCCCC-HHHHHHHHHHHHhCCCeEEEE
Q 014172 236 SPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLS 267 (429)
Q Consensus 236 ~p~NPtG~~~~-~~~l~~I~~~a~~~~~i~vi~ 267 (429)
+-...||.... .++++++++.++++.++.|++
T Consensus 162 s~~GvTG~~~~~~~~~~~~i~~vk~~~~~Pv~v 194 (250)
T PLN02591 162 SSTGVTGARASVSGRVESLLQELKEVTDKPVAV 194 (250)
T ss_pred eCCCCcCCCcCCchhHHHHHHHHHhcCCCceEE
Confidence 76777886433 456888777777765666664
No 399
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=75.85 E-value=27 Score=31.34 Aligned_cols=96 Identities=16% Similarity=0.204 Sum_probs=58.6
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEE
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLL 232 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i 232 (429)
+....|++..||..+... +..|++.|..|.+-+|............| ++..+.- . ...+.+. ...+
T Consensus 7 l~gk~vlVvGgG~va~rk-~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~-~i~~~~~----~--~~~~dl~------~~~l 72 (205)
T TIGR01470 7 LEGRAVLVVGGGDVALRK-ARLLLKAGAQLRVIAEELESELTLLAEQG-GITWLAR----C--FDADILE------GAFL 72 (205)
T ss_pred cCCCeEEEECcCHHHHHH-HHHHHHCCCEEEEEcCCCCHHHHHHHHcC-CEEEEeC----C--CCHHHhC------CcEE
Confidence 344578888888888774 57777888888888887654433333333 4444432 1 2333332 2344
Q ss_pred EEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEE-EEccC
Q 014172 233 ILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLV-LSDEI 270 (429)
Q Consensus 233 ~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~v-i~Dea 270 (429)
++..++++ +.-+.|.+.|+++ ++++ +.|+.
T Consensus 73 Vi~at~d~-------~ln~~i~~~a~~~-~ilvn~~d~~ 103 (205)
T TIGR01470 73 VIAATDDE-------ELNRRVAHAARAR-GVPVNVVDDP 103 (205)
T ss_pred EEECCCCH-------HHHHHHHHHHHHc-CCEEEECCCc
Confidence 55555553 2246799999998 8877 34554
No 400
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=74.40 E-value=76 Score=29.66 Aligned_cols=166 Identities=22% Similarity=0.196 Sum_probs=98.3
Q ss_pred HHHHHHHHhcCCCeEEcCCCCCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEec
Q 014172 84 TDQATALAQAGVSVIRLAAGEPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSN 162 (429)
Q Consensus 84 ~~~~~~~~~~g~~~i~L~~g~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~ 162 (429)
.+.+..+.+.|.++|-++.-.++.-. -|.+.++..++++++.+ ...+-+.+.+.-.+... --+++.+
T Consensus 27 ~~~~~~l~~~GaD~iEiGiPfSDP~ADGpvIq~A~~rAL~~G~~-------~~~~~~~~~~ir~~~~~-----~pivlm~ 94 (259)
T PF00290_consen 27 LEILKALEEAGADIIEIGIPFSDPVADGPVIQKASQRALKNGFT-------LEKIFELVKEIRKKEPD-----IPIVLMT 94 (259)
T ss_dssp HHHHHHHHHTTBSSEEEE--SSSCTTSSHHHHHHHHHHHHTT---------HHHHHHHHHHHHHHCTS-----SEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCC-------HHHHHHHHHHHhccCCC-----CCEEEEe
Confidence 45566777788888888776655333 37788888888876431 24444444443312111 2344443
Q ss_pred ChHH----HHHHHHHHhcCCC-CEEEEcCCCCCC---hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEE
Q 014172 163 GAKQ----SILQAVLAVCSPG-DEVIIPAPFWVS---YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLIL 234 (429)
Q Consensus 163 G~~~----al~~~l~~l~~~g-d~Vlv~~p~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l 234 (429)
=... ++...+..+.+-| |.|++++--+.. +...++..|..++.+=.. + -+.+.+++........||+
T Consensus 95 Y~N~i~~~G~e~F~~~~~~aGvdGlIipDLP~ee~~~~~~~~~~~gl~~I~lv~p--~---t~~~Ri~~i~~~a~gFiY~ 169 (259)
T PF00290_consen 95 YYNPIFQYGIERFFKEAKEAGVDGLIIPDLPPEESEELREAAKKHGLDLIPLVAP--T---TPEERIKKIAKQASGFIYL 169 (259)
T ss_dssp -HHHHHHH-HHHHHHHHHHHTEEEEEETTSBGGGHHHHHHHHHHTT-EEEEEEET--T---S-HHHHHHHHHH-SSEEEE
T ss_pred eccHHhccchHHHHHHHHHcCCCEEEEcCCChHHHHHHHHHHHHcCCeEEEEECC--C---CCHHHHHHHHHhCCcEEEe
Confidence 3322 3333444444556 889999965553 445677889988776432 2 2667777766666788888
Q ss_pred cCCCCCccCCCC-HHHHHHHHHHHHhCCCeEEE
Q 014172 235 CSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVL 266 (429)
Q Consensus 235 ~~p~NPtG~~~~-~~~l~~I~~~a~~~~~i~vi 266 (429)
.+-...||.--. .+++.+.++.++++-++.|+
T Consensus 170 vs~~GvTG~~~~~~~~l~~~i~~ik~~~~~Pv~ 202 (259)
T PF00290_consen 170 VSRMGVTGSRTELPDELKEFIKRIKKHTDLPVA 202 (259)
T ss_dssp ESSSSSSSTTSSCHHHHHHHHHHHHHTTSS-EE
T ss_pred eccCCCCCCcccchHHHHHHHHHHHhhcCcceE
Confidence 888888998654 45688888888887445554
No 401
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=73.90 E-value=20 Score=32.45 Aligned_cols=96 Identities=16% Similarity=0.083 Sum_probs=55.6
Q ss_pred EEEecC-hHHHHHHHHHHhcCCCCE-EEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEc
Q 014172 158 ILVSNG-AKQSILQAVLAVCSPGDE-VIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC 235 (429)
Q Consensus 158 i~~t~G-~~~al~~~l~~l~~~gd~-Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~ 235 (429)
|+++.+ |..+-. ++.+|+..+-. .++.++.-......++..|++++..+++ |.+.|.++++ +...++++
T Consensus 1 I~V~GatG~~G~~-v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~-------~~~~l~~al~-g~d~v~~~ 71 (233)
T PF05368_consen 1 ILVTGATGNQGRS-VVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYD-------DPESLVAALK-GVDAVFSV 71 (233)
T ss_dssp EEEETTTSHHHHH-HHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT--------HHHHHHHHT-TCSEEEEE
T ss_pred CEEECCccHHHHH-HHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccC-------CHHHHHHHHc-CCceEEee
Confidence 344443 444433 56666666644 4444544222344566789998876642 8899999988 45555555
Q ss_pred CCCCCccCCCCHHHHHHHHHHHHhCCCeEEE
Q 014172 236 SPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (429)
Q Consensus 236 ~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi 266 (429)
.+.+. ....+.-..+++.|++. ++-.+
T Consensus 72 ~~~~~---~~~~~~~~~li~Aa~~a-gVk~~ 98 (233)
T PF05368_consen 72 TPPSH---PSELEQQKNLIDAAKAA-GVKHF 98 (233)
T ss_dssp SSCSC---CCHHHHHHHHHHHHHHH-T-SEE
T ss_pred cCcch---hhhhhhhhhHHHhhhcc-ccceE
Confidence 45332 22445577889999987 66555
No 402
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=73.19 E-value=22 Score=33.67 Aligned_cols=101 Identities=10% Similarity=0.053 Sum_probs=58.8
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc--
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE-- 227 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-- 227 (429)
+..+-|++|.||...-..+..-+.+.|.++++-+-.-.+..+ .++..| ++..+-+|-.+. =++..+.+.+++
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~--eei~~~a~~Vk~e~ 112 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDR--EEIYRLAKKVKKEV 112 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCH--HHHHHHHHHHHHhc
Confidence 455678899998888888888888999877665543333333 333335 566665543221 023333334433
Q ss_pred CCcEEEEcCCC---CCccCCCCHHHHHHHHHH
Q 014172 228 KSRLLILCSPS---NPTGSVYPKNLLDEIARI 256 (429)
Q Consensus 228 ~~~~i~l~~p~---NPtG~~~~~~~l~~I~~~ 256 (429)
+.--|++||.. .-...-++.++++...++
T Consensus 113 G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~v 144 (300)
T KOG1201|consen 113 GDVDILVNNAGIVTGKKLLDCSDEEIQKTFDV 144 (300)
T ss_pred CCceEEEeccccccCCCccCCCHHHHHHHHHH
Confidence 33455666663 223344677788877665
No 403
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=71.72 E-value=88 Score=29.22 Aligned_cols=167 Identities=18% Similarity=0.176 Sum_probs=89.3
Q ss_pred HHHHHHHHhcCCCeEEcCCCCCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEec
Q 014172 84 TDQATALAQAGVSVIRLAAGEPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSN 162 (429)
Q Consensus 84 ~~~~~~~~~~g~~~i~L~~g~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~ 162 (429)
.+.+..+.+.|.++|-|+.-.++.-. -|.+.++-.++++++.+ ...+-+.+.+.-.+....+ =++.|=
T Consensus 29 ~~~~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~~AL~~G~~-------~~~~~~~~~~~r~~~~~~p----~vlm~Y 97 (258)
T PRK13111 29 LEIIKALVEAGADIIELGIPFSDPVADGPVIQAASLRALAAGVT-------LADVFELVREIREKDPTIP----IVLMTY 97 (258)
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCcccCHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHhcCCCCC----EEEEec
Confidence 34456676788888888766655333 36777777778776431 1233344433321111211 133331
Q ss_pred C---hHHHHHHHHHHhcCCC-CEEEEcCCCCCC---hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEc
Q 014172 163 G---AKQSILQAVLAVCSPG-DEVIIPAPFWVS---YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC 235 (429)
Q Consensus 163 G---~~~al~~~l~~l~~~g-d~Vlv~~p~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~ 235 (429)
- -.-++...+..+.+.| |.|++++-.+.. +...++..|...+.+=.. + ...+.++.........|++.
T Consensus 98 ~N~i~~~G~e~f~~~~~~aGvdGviipDLp~ee~~~~~~~~~~~gl~~I~lvap--~---t~~eri~~i~~~s~gfIY~v 172 (258)
T PRK13111 98 YNPIFQYGVERFAADAAEAGVDGLIIPDLPPEEAEELRAAAKKHGLDLIFLVAP--T---TTDERLKKIASHASGFVYYV 172 (258)
T ss_pred ccHHhhcCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCC--C---CCHHHHHHHHHhCCCcEEEE
Confidence 1 1124444555566666 888888865542 344566778887763221 1 24566665555455667764
Q ss_pred CCCCCccCCC-CHHHHHHHHHHHHhCCCeEEE
Q 014172 236 SPSNPTGSVY-PKNLLDEIARIVAKHPRLLVL 266 (429)
Q Consensus 236 ~p~NPtG~~~-~~~~l~~I~~~a~~~~~i~vi 266 (429)
+-...||..- ..+.+.+.++.++++.++.|+
T Consensus 173 s~~GvTG~~~~~~~~~~~~i~~vk~~~~~pv~ 204 (258)
T PRK13111 173 SRAGVTGARSADAADLAELVARLKAHTDLPVA 204 (258)
T ss_pred eCCCCCCcccCCCccHHHHHHHHHhcCCCcEE
Confidence 4444577632 123456566666655355555
No 404
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=69.44 E-value=16 Score=29.89 Aligned_cols=56 Identities=11% Similarity=0.322 Sum_probs=44.3
Q ss_pred CEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEE--cCC---CCCccCCCCHHHHHHHHHHHHhC
Q 014172 201 ATPVILPTRISENFLLDPKVLESKLTEKSRLLIL--CSP---SNPTGSVYPKNLLDEIARIVAKH 260 (429)
Q Consensus 201 ~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l--~~p---~NPtG~~~~~~~l~~I~~~a~~~ 260 (429)
.+++.+|.. ..+|+..|.+++......|++ |.| |+..|.....++++.+-++..+.
T Consensus 29 vriIrvpC~----Grv~~~~il~Af~~GADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~ 89 (124)
T PF02662_consen 29 VRIIRVPCS----GRVDPEFILRAFEKGADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEEL 89 (124)
T ss_pred eEEEEccCC----CccCHHHHHHHHHcCCCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHc
Confidence 567777763 448999999999988887776 665 56899999888888888888766
No 405
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=68.00 E-value=58 Score=29.68 Aligned_cols=98 Identities=17% Similarity=0.158 Sum_probs=64.7
Q ss_pred EEEecChHHHHHHHHHHhcCCCCEEEE----cCC--CC--C-----ChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhh
Q 014172 158 ILVSNGAKQSILQAVLAVCSPGDEVII----PAP--FW--V-----SYPEMARIADATPVILPTRISENFLLDPKVLESK 224 (429)
Q Consensus 158 i~~t~G~~~al~~~l~~l~~~gd~Vlv----~~p--~y--~-----~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~ 224 (429)
++.-+||..+..++..++-+ .+.+.+ +.. .| . -...+++..|...+.++..... .--.+.+.++
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~~~~--e~~~e~l~~~ 80 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-HEVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTEGTE--EDEVEELKGI 80 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-CeeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecCCCc--cHHHHHHHHH
Confidence 46678999999888887766 543222 111 11 1 1234667789888776653221 1235566665
Q ss_pred ccc-CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE
Q 014172 225 LTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (429)
Q Consensus 225 l~~-~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi 266 (429)
+.. +...++ +|.+.+..++..+-++|.+- |+..+
T Consensus 81 l~~~gv~~vv-------~GdI~s~~qr~~~e~v~~~l-gl~~~ 115 (223)
T TIGR00290 81 LHTLDVEAVV-------FGAIYSEYQKTRIERVCREL-GLKSF 115 (223)
T ss_pred HHHcCCCEEE-------ECCcccHHHHHHHHHHHHhc-CCEEe
Confidence 543 566666 89999999999999999998 87766
No 406
>PRK08265 short chain dehydrogenase; Provisional
Probab=67.31 E-value=58 Score=30.00 Aligned_cols=96 Identities=15% Similarity=0.079 Sum_probs=51.6
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------C
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------K 228 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~ 228 (429)
...+++|.|+...-..+...+++.|..|++..-.-.......+..+.++..+..+.. |.+.+++.++. +
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~~g~ 80 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDIT-----DDAAIERAVATVVARFGR 80 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCC-----CHHHHHHHHHHHHHHhCC
Confidence 346777776665555566777888988777654322333444455666666665432 45555554432 3
Q ss_pred CcEEEEcCCC-CCccCCCCHHHHHHHHH
Q 014172 229 SRLLILCSPS-NPTGSVYPKNLLDEIAR 255 (429)
Q Consensus 229 ~~~i~l~~p~-NPtG~~~~~~~l~~I~~ 255 (429)
...++.+... .+.+...+.+++++..+
T Consensus 81 id~lv~~ag~~~~~~~~~~~~~~~~~~~ 108 (261)
T PRK08265 81 VDILVNLACTYLDDGLASSRADWLAALD 108 (261)
T ss_pred CCEEEECCCCCCCCcCcCCHHHHHHHHh
Confidence 4555433322 22333455556655443
No 407
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=66.65 E-value=18 Score=34.41 Aligned_cols=72 Identities=11% Similarity=0.230 Sum_probs=48.0
Q ss_pred EcCCCCCChHHHHHH--cCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCC
Q 014172 184 IPAPFWVSYPEMARI--ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP 261 (429)
Q Consensus 184 v~~p~y~~~~~~~~~--~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~ 261 (429)
..-|+|++..+.-.. ...-++.+|.. .-++.+++....+.|.++|.+-.. +.++-++|.++|+++
T Consensus 49 ~G~~~y~sv~dlp~~~~~DlAvi~vp~~------~v~~~l~e~~~~gvk~avI~s~Gf------~~~~~~~l~~~a~~~- 115 (291)
T PRK05678 49 LGLPVFNTVAEAVEATGANASVIYVPPP------FAADAILEAIDAGIDLIVCITEGI------PVLDMLEVKAYLERK- 115 (291)
T ss_pred eCeeccCCHHHHhhccCCCEEEEEcCHH------HHHHHHHHHHHCCCCEEEEECCCC------CHHHHHHHHHHHHHc-
Confidence 444566666666664 45555555531 257888888888888877644432 244456899999999
Q ss_pred CeEEEEc
Q 014172 262 RLLVLSD 268 (429)
Q Consensus 262 ~i~vi~D 268 (429)
++.|+==
T Consensus 116 girvlGP 122 (291)
T PRK05678 116 KTRLIGP 122 (291)
T ss_pred CCEEECC
Confidence 9999933
No 408
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=65.56 E-value=1.2e+02 Score=28.41 Aligned_cols=167 Identities=18% Similarity=0.172 Sum_probs=98.9
Q ss_pred HHHHHHHHhcCCCeEEcCCCCCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEe-
Q 014172 84 TDQATALAQAGVSVIRLAAGEPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVS- 161 (429)
Q Consensus 84 ~~~~~~~~~~g~~~i~L~~g~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t- 161 (429)
.+.++.+.+.|.++|-|+.-.++.-. -|.+..+-.++++.+ ++. ...-+.+.+.-.+ +..++ -+++|
T Consensus 34 ~e~i~~L~~~GaD~iELGvPfSDPvADGP~Iq~A~~rAL~~g---~t~----~~~lel~~~~r~~--~~~~P--ivlm~Y 102 (265)
T COG0159 34 LEIIKTLVEAGADILELGVPFSDPVADGPTIQAAHLRALAAG---VTL----EDTLELVEEIRAK--GVKVP--IVLMTY 102 (265)
T ss_pred HHHHHHHHhCCCCEEEecCCCCCcCccCHHHHHHHHHHHHCC---CCH----HHHHHHHHHHHhc--CCCCC--EEEEEe
Confidence 34555666788888888776655333 367777778888753 222 2333333333211 11111 23332
Q ss_pred --cChHHHHHHHHHHhcCCC-CEEEEcCCCCC---ChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEc
Q 014172 162 --NGAKQSILQAVLAVCSPG-DEVIIPAPFWV---SYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC 235 (429)
Q Consensus 162 --~G~~~al~~~l~~l~~~g-d~Vlv~~p~y~---~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~ 235 (429)
.=..-++...++.+.+.| |.+++++--+. .+...++..|..++++-.. + -+.+.|++........+|+.
T Consensus 103 ~Npi~~~Gie~F~~~~~~~GvdGlivpDLP~ee~~~~~~~~~~~gi~~I~lvaP--t---t~~~rl~~i~~~a~GFiY~v 177 (265)
T COG0159 103 YNPIFNYGIEKFLRRAKEAGVDGLLVPDLPPEESDELLKAAEKHGIDPIFLVAP--T---TPDERLKKIAEAASGFIYYV 177 (265)
T ss_pred ccHHHHhhHHHHHHHHHHcCCCEEEeCCCChHHHHHHHHHHHHcCCcEEEEeCC--C---CCHHHHHHHHHhCCCcEEEE
Confidence 113444555556666666 88999885332 3556778889988777532 2 25667766665555778887
Q ss_pred CCCCCccCCCC-HHHHHHHHHHHHhCCCeEEE
Q 014172 236 SPSNPTGSVYP-KNLLDEIARIVAKHPRLLVL 266 (429)
Q Consensus 236 ~p~NPtG~~~~-~~~l~~I~~~a~~~~~i~vi 266 (429)
+-+--||.-.+ ...+.++++-.+++-++.++
T Consensus 178 s~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~ 209 (265)
T COG0159 178 SRMGVTGARNPVSADVKELVKRVRKYTDVPVL 209 (265)
T ss_pred ecccccCCCcccchhHHHHHHHHHHhcCCCeE
Confidence 77778998776 33477888888876344443
No 409
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=64.98 E-value=81 Score=30.78 Aligned_cols=109 Identities=13% Similarity=0.127 Sum_probs=61.6
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEE--EEcCCCCCC------hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEV--IIPAPFWVS------YPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~V--lv~~p~y~~------~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
.+.|+..+||..+..++..+.-.-|..+ +..++.|.. ....++.+|+....+.+ |++.+.+.+.
T Consensus 60 yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~--------d~~~~~~l~~ 131 (343)
T TIGR03573 60 YDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITI--------NPETFRKLQR 131 (343)
T ss_pred CCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeC--------CHHHHHHHHH
Confidence 4577888898888776533322234333 455666652 33456668888877764 4444443322
Q ss_pred cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCC
Q 014172 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 278 (429)
Q Consensus 227 ~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~ 278 (429)
...+ +..+|...+ .......+.++|+++ |+.+|...-...-.|+|
T Consensus 132 ~~~~-----~~~~pc~~c-~~~~~~~l~~~A~~~-gi~~Il~G~~~dE~fgG 176 (343)
T TIGR03573 132 AYFK-----KVGDPEWPQ-DHAIFASVYQVALKF-NIPLIIWGENIAEEYGG 176 (343)
T ss_pred HHHh-----ccCCCchhh-hhHHHHHHHHHHHHh-CCCEEEeCCCHHHhcCC
Confidence 1111 223333222 233467888999999 99888775555433433
No 410
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=63.23 E-value=65 Score=29.33 Aligned_cols=98 Identities=16% Similarity=0.106 Sum_probs=62.9
Q ss_pred EEEecChHHHHHHHHHHhcCCCCEEEE--cCCC------CC-----ChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhh
Q 014172 158 ILVSNGAKQSILQAVLAVCSPGDEVII--PAPF------WV-----SYPEMARIADATPVILPTRISENFLLDPKVLESK 224 (429)
Q Consensus 158 i~~t~G~~~al~~~l~~l~~~gd~Vlv--~~p~------y~-----~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~ 224 (429)
++..+||..+..++..++-+ .+.+.+ ..|. |. -...+++..|...+.+....+ ..--.+++.+.
T Consensus 4 ~vl~SGGKDS~lAl~~~~~~-~~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algiPl~~~~~~~~--~e~~~~~l~~~ 80 (222)
T TIGR00289 4 AVLYSGGKDSILALYKALEE-HEVISLVGVFSENEESYMFHSPNLHLTDLVAEAVGIPLIKLYTSGE--EEKEVEDLAGQ 80 (222)
T ss_pred EEEecCcHHHHHHHHHHHHc-CeeEEEEEEcCCCCCccccccCCHHHHHHHHHHcCCCeEEEEcCCc--hhHHHHHHHHH
Confidence 45678888888877776655 543222 1121 11 123567788988777765321 11134455444
Q ss_pred ccc-CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE
Q 014172 225 LTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (429)
Q Consensus 225 l~~-~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi 266 (429)
+.. +...|+ +|.+.+..+...+-++|++- |+..+
T Consensus 81 l~~~gv~~vv-------~GdI~s~~qr~~~e~vc~~~-gl~~~ 115 (222)
T TIGR00289 81 LGELDVEALC-------IGAIESNYQKSRIDKVCREL-GLKSI 115 (222)
T ss_pred HHHcCCCEEE-------ECccccHHHHHHHHHHHHHc-CCEEe
Confidence 433 566776 89999999999999999998 87766
No 411
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=63.07 E-value=1.3e+02 Score=27.99 Aligned_cols=168 Identities=17% Similarity=0.170 Sum_probs=90.3
Q ss_pred HHHHHHHhcCCCeEEcCCCCCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecC
Q 014172 85 DQATALAQAGVSVIRLAAGEPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNG 163 (429)
Q Consensus 85 ~~~~~~~~~g~~~i~L~~g~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G 163 (429)
+.++.+.+.|.++|-|+.-.++.-. -|.+.++..++++++.+ ...+.+.+.+.-+..... .-......|-
T Consensus 28 ~~~~~l~~~Gad~iElGiPfsDP~aDGpvIq~a~~~al~~G~~-------~~~~~~~v~~ir~~~~~~--plv~m~Y~Np 98 (256)
T TIGR00262 28 EIIKTLIEAGADALELGVPFSDPLADGPTIQAADLRALRAGMT-------PEKCFELLKKVRQKHPNI--PIGLLTYYNL 98 (256)
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCCcCHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHhcCCCC--CEEEEEeccH
Confidence 4456677788899988776655333 36777787788876431 123333333321111122 2122222221
Q ss_pred -hHHHHHHHHHHhcCCC-CEEEEcCCCCCC---hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCC
Q 014172 164 -AKQSILQAVLAVCSPG-DEVIIPAPFWVS---YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPS 238 (429)
Q Consensus 164 -~~~al~~~l~~l~~~g-d~Vlv~~p~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~ 238 (429)
-.-++...+..+.+.| |.|++++-.+.. +...++..|..++.+=. + . -+.+.++.........|++.+-+
T Consensus 99 i~~~G~e~f~~~~~~aGvdgviipDlp~ee~~~~~~~~~~~gl~~i~lv~-P-~---T~~eri~~i~~~~~gfiy~vs~~ 173 (256)
T TIGR00262 99 IFRKGVEEFYAKCKEVGVDGVLVADLPLEESGDLVEAAKKHGVKPIFLVA-P-N---ADDERLKQIAEKSQGFVYLVSRA 173 (256)
T ss_pred HhhhhHHHHHHHHHHcCCCEEEECCCChHHHHHHHHHHHHCCCcEEEEEC-C-C---CCHHHHHHHHHhCCCCEEEEECC
Confidence 1224444556666666 788888754432 34556778888764422 1 2 25677766665545577765655
Q ss_pred CCccCC--CCHHHHHHHHHHHHhCCCeEEEE
Q 014172 239 NPTGSV--YPKNLLDEIARIVAKHPRLLVLS 267 (429)
Q Consensus 239 NPtG~~--~~~~~l~~I~~~a~~~~~i~vi~ 267 (429)
.-||.. ++.+ +.+.++.++++.+..|++
T Consensus 174 G~TG~~~~~~~~-~~~~i~~lr~~~~~pi~v 203 (256)
T TIGR00262 174 GVTGARNRAASA-LNELVKRLKAYSAKPVLV 203 (256)
T ss_pred CCCCCcccCChh-HHHHHHHHHhhcCCCEEE
Confidence 678864 4444 444455445442444443
No 412
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=62.16 E-value=24 Score=33.51 Aligned_cols=74 Identities=12% Similarity=0.222 Sum_probs=48.6
Q ss_pred EcCCCCCChHHHHHH--cCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCC
Q 014172 184 IPAPFWVSYPEMARI--ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP 261 (429)
Q Consensus 184 v~~p~y~~~~~~~~~--~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~ 261 (429)
..-|+|++..+..+. ...-++.+|.. .-++.+++....+.|.+++.+... +..+-++|.++|+++
T Consensus 47 ~G~~~y~sv~dlp~~~~~Dlavi~vpa~------~v~~~l~e~~~~Gvk~avIis~Gf------~e~~~~~l~~~a~~~- 113 (286)
T TIGR01019 47 LGLPVFDSVKEAVEETGANASVIFVPAP------FAADAIFEAIDAGIELIVCITEGI------PVHDMLKVKRYMEES- 113 (286)
T ss_pred cCeeccCCHHHHhhccCCCEEEEecCHH------HHHHHHHHHHHCCCCEEEEECCCC------CHHHHHHHHHHHHHc-
Confidence 445567777776654 34455555531 257788888888888887655432 333457899999999
Q ss_pred CeEEEEccC
Q 014172 262 RLLVLSDEI 270 (429)
Q Consensus 262 ~i~vi~Dea 270 (429)
++.|+==.+
T Consensus 114 girilGPNc 122 (286)
T TIGR01019 114 GTRLIGPNC 122 (286)
T ss_pred CCEEECCCC
Confidence 999983333
No 413
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=61.67 E-value=1.4e+02 Score=27.93 Aligned_cols=167 Identities=14% Similarity=0.173 Sum_probs=98.8
Q ss_pred HHHHHHHHhcCCCeEEcCCCCCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEec
Q 014172 84 TDQATALAQAGVSVIRLAAGEPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSN 162 (429)
Q Consensus 84 ~~~~~~~~~~g~~~i~L~~g~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~ 162 (429)
.+.+..+.+.|.++|-|+.-.++.-. -|.+.++..++++++.+ ...+.+.+.+. ++....+ =|+.|=
T Consensus 32 ~~~~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~-------~~~~~~~~~~~-r~~~~~p----~vlm~Y 99 (263)
T CHL00200 32 KKALKILDKKGADIIELGIPYSDPLADGPIIQEASNRALKQGIN-------LNKILSILSEV-NGEIKAP----IVIFTY 99 (263)
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCCccCHHHHHHHHHHHHcCCC-------HHHHHHHHHHH-hcCCCCC----EEEEec
Confidence 34566677788899888776655333 36777888888876421 13344444443 2212211 133332
Q ss_pred C---hHHHHHHHHHHhcCCC-CEEEEcCCCCCC---hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEc
Q 014172 163 G---AKQSILQAVLAVCSPG-DEVIIPAPFWVS---YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC 235 (429)
Q Consensus 163 G---~~~al~~~l~~l~~~g-d~Vlv~~p~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~ 235 (429)
- -.-++...+..+.+.| |.|++++-.+.. +...++..|..++.+=.. + -+.+.++...+.....||+.
T Consensus 100 ~N~i~~~G~e~F~~~~~~aGvdgviipDLP~ee~~~~~~~~~~~gi~~I~lv~P--t---T~~eri~~i~~~a~gFIY~v 174 (263)
T CHL00200 100 YNPVLHYGINKFIKKISQAGVKGLIIPDLPYEESDYLISVCNLYNIELILLIAP--T---SSKSRIQKIARAAPGCIYLV 174 (263)
T ss_pred ccHHHHhCHHHHHHHHHHcCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEEECC--C---CCHHHHHHHHHhCCCcEEEE
Confidence 2 1224444566666667 889999865554 345677889887776432 2 25677777665555588876
Q ss_pred CCCCCccCCCC-HHHHHHHHHHHHhCCCeEEEE
Q 014172 236 SPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLS 267 (429)
Q Consensus 236 ~p~NPtG~~~~-~~~l~~I~~~a~~~~~i~vi~ 267 (429)
+-...||.--. .++++++.+..+++-++.|.+
T Consensus 175 S~~GvTG~~~~~~~~~~~~i~~ir~~t~~Pi~v 207 (263)
T CHL00200 175 STTGVTGLKTELDKKLKKLIETIKKMTNKPIIL 207 (263)
T ss_pred cCCCCCCCCccccHHHHHHHHHHHHhcCCCEEE
Confidence 76667887422 245777777777664555554
No 414
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=60.91 E-value=41 Score=28.88 Aligned_cols=88 Identities=15% Similarity=0.081 Sum_probs=51.7
Q ss_pred EEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCC
Q 014172 158 ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSP 237 (429)
Q Consensus 158 i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p 237 (429)
|+++.++-..-..++..|++.|-+|.+..-.-..... ..+++++..+. .|++.+.+++. +...++.+.+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~-------~d~~~~~~al~-~~d~vi~~~~ 69 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDL-------FDPDSVKAALK-GADAVIHAAG 69 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCT-------TCHHHHHHHHT-TSSEEEECCH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeee-------hhhhhhhhhhh-hcchhhhhhh
Confidence 4455543333344677777777665544433222233 45556555443 37899999888 4566665444
Q ss_pred CCCccCCCCHHHHHHHHHHHHhC
Q 014172 238 SNPTGSVYPKNLLDEIARIVAKH 260 (429)
Q Consensus 238 ~NPtG~~~~~~~l~~I~~~a~~~ 260 (429)
.++. +.+..+.+++.|+++
T Consensus 70 ~~~~----~~~~~~~~~~a~~~~ 88 (183)
T PF13460_consen 70 PPPK----DVDAAKNIIEAAKKA 88 (183)
T ss_dssp STTT----HHHHHHHHHHHHHHT
T ss_pred hhcc----ccccccccccccccc
Confidence 3333 266688889988887
No 415
>cd03313 enolase Enolase: Enolases are homodimeric enzymes that catalyse the reversible dehydration of 2-phospho-D-glycerate to phosphoenolpyruvate as part of the glycolytic and gluconeogenesis pathways. The reaction is facilitated by the presence of metal ions.
Probab=60.76 E-value=57 Score=32.73 Aligned_cols=154 Identities=16% Similarity=0.171 Sum_probs=81.1
Q ss_pred EcCCCC-----CCCCChHHHHHHHHHHHHcCCCCCCCCCCCH-HHHHHHHHHHHhhcCCCCC-CCcEEEecChHHHHHHH
Q 014172 99 RLAAGE-----PDFDTPVLIAEAGINAIREGFTRYTPNAGTL-ELRSAICHKLKEENGLSYT-PDQILVSNGAKQSILQA 171 (429)
Q Consensus 99 ~L~~g~-----~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~-~lr~~ia~~l~~~~g~~~~-~~~i~~t~G~~~al~~~ 171 (429)
.+..|+ |++....+.++.+.++++. .+|.+..... .+--+-.+++.. ....+. ..+.. -...+++. .
T Consensus 196 ~~~vgdeGg~~p~~~~d~~~l~~i~eAi~~--~g~~~G~dv~i~lD~aas~~~~~-~~y~~~~~~~~~--~t~~eai~-~ 269 (408)
T cd03313 196 ATNVGDEGGFAPNLSSNEEALDLLVEAIEK--AGYEPGKKIAIALDVAASEFYDE-GKYVYDSDEGKK--LTSEELID-Y 269 (408)
T ss_pred ccccccccCcCCCCCChHHHHHHHHHHHHH--hcCCCCCeEEEEEehhhhhhccc-CcceeccCCCcc--cCHHHHHH-H
Confidence 345565 5555567788888888765 4554311111 111111222210 001111 01111 13466666 3
Q ss_pred HHHhcCCCCEEEEcCCCCCCh----HHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCH
Q 014172 172 VLAVCSPGDEVIIPAPFWVSY----PEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPK 247 (429)
Q Consensus 172 l~~l~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~ 247 (429)
+..++++-+.+++++|....- ....+..|-.+ .+-.+ +.+.-+++.+++.+..+..-++..-++. .|.+..
T Consensus 270 ~~~l~e~~~i~~iEdPl~~~D~eg~~~L~~~~g~~i-pi~gd--E~~~~~~~~~~~~i~~~a~d~v~ik~~~-iGGite- 344 (408)
T cd03313 270 YKELVKKYPIVSIEDPFDEDDWEGWAKLTAKLGDKI-QIVGD--DLFVTNPERLKKGIEKKAANALLIKVNQ-IGTLTE- 344 (408)
T ss_pred HHHHHHhCCcEEEEeCCCCcCHHHHHHHHHhcCCCC-eEEcC--CcccCCHHHHHHHHHhCCCCEEEEcccc-cCCHHH-
Confidence 455555556789999986543 33333332222 22221 2233479999998877654455555554 444433
Q ss_pred HHHHHHHHHHHhCCCeEEE
Q 014172 248 NLLDEIARIVAKHPRLLVL 266 (429)
Q Consensus 248 ~~l~~I~~~a~~~~~i~vi 266 (429)
..+++++|+.+ ++.++
T Consensus 345 --~~~ia~lA~~~-G~~~~ 360 (408)
T cd03313 345 --TIEAIKLAKKN-GYGVV 360 (408)
T ss_pred --HHHHHHHHHHc-CCeEE
Confidence 88899999999 88876
No 416
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=60.56 E-value=19 Score=34.94 Aligned_cols=69 Identities=10% Similarity=0.136 Sum_probs=44.2
Q ss_pred HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEE
Q 014172 194 EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 267 (429)
Q Consensus 194 ~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~ 267 (429)
+.+...+.++....+..+.+|.+......++-..... .....+.|-.++++++++|++.|+++ +|-||-
T Consensus 25 d~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~ga~----~~~~~~~~~~YT~~di~elv~yA~~r-gI~vIP 93 (329)
T cd06568 25 DLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEIGGS----TEVGGGPGGYYTQEDYKDIVAYAAER-HITVVP 93 (329)
T ss_pred HHHHHhCCcEEEEEeecCCcceeeecCcccccccccc----cccCCCCCCcCCHHHHHHHHHHHHHc-CCEEEE
Confidence 4455567777777766555666655444333211110 11224567789999999999999999 998883
No 417
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=60.15 E-value=1.1e+02 Score=29.42 Aligned_cols=53 Identities=19% Similarity=0.090 Sum_probs=33.9
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCC--CEEEEcCCCCCChHHHHHHcCCEEEEecC
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVILPT 208 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~g--d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~ 208 (429)
...|+..+++..++.++..+- ..| -.|+++...=..-...++..|++++.++-
T Consensus 70 ~~~vv~~SsGN~g~alA~~a~-~~G~~~~ivvp~~~~~~k~~~l~~~GA~Vi~~~~ 124 (324)
T cd01563 70 VKAVACASTGNTSASLAAYAA-RAGIKCVVFLPAGKALGKLAQALAYGATVLAVEG 124 (324)
T ss_pred CCEEEEeCCCHHHHHHHHHHH-HcCCceEEEEeCCCCHHHHHHHHHcCCEEEEECC
Confidence 346777778888877664432 234 44555554423345678889999999873
No 418
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=60.15 E-value=73 Score=30.16 Aligned_cols=106 Identities=16% Similarity=0.212 Sum_probs=63.4
Q ss_pred CCHHHHHhhccc-CCcEEEEcCC-CCCccCCCCHH--------HHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccc
Q 014172 216 LDPKVLESKLTE-KSRLLILCSP-SNPTGSVYPKN--------LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (429)
Q Consensus 216 ~d~e~l~~~l~~-~~~~i~l~~p-~NPtG~~~~~~--------~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~ 285 (429)
.|++.+.+.+.. ++.+|+-+.. ++.-+.--.++ --..|++.|++. |.++|. +-.+++|+|....++.
T Consensus 37 td~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~-ga~lVh--iSTDyVFDG~~~~~Y~ 113 (281)
T COG1091 37 TDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEV-GARLVH--ISTDYVFDGEKGGPYK 113 (281)
T ss_pred cChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHh-CCeEEE--eecceEecCCCCCCCC
Confidence 378888888765 5777664444 45554444433 246789999999 888874 3345677776644444
Q ss_pred cCCCCCCceEEEeccChhccc-------c---cceeeEEEcC--HHHHHHHHH
Q 014172 286 SLPGMWERTLTVNGFSKAFAM-------T---GWRLGYIAGP--KHFVAACNK 326 (429)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~~~-------~---G~R~G~v~~~--~~~~~~l~~ 326 (429)
.-+. .+=+.+.+-||..|= + =+|.+|+.+. ..++..+.+
T Consensus 114 E~D~--~~P~nvYG~sKl~GE~~v~~~~~~~~I~Rtswv~g~~g~nFv~tml~ 164 (281)
T COG1091 114 ETDT--PNPLNVYGRSKLAGEEAVRAAGPRHLILRTSWVYGEYGNNFVKTMLR 164 (281)
T ss_pred CCCC--CCChhhhhHHHHHHHHHHHHhCCCEEEEEeeeeecCCCCCHHHHHHH
Confidence 4322 222446667776531 1 1789999875 345554443
No 419
>PRK06194 hypothetical protein; Provisional
Probab=57.02 E-value=1.1e+02 Score=28.49 Aligned_cols=78 Identities=13% Similarity=0.049 Sum_probs=42.9
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHH---HHcCCEEEEecCCCCCCCCCCHHHHHhhccc-----
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA---RIADATPVILPTRISENFLLDPKVLESKLTE----- 227 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~----- 227 (429)
..+++|.|+...-..+...+++.|..|++.+-.-....... ...|.++..+..+- -|.+.+++.+..
T Consensus 7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~d~~~~~~~~~~~~~~~ 81 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDV-----SDAAQVEALADAALERF 81 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCC-----CCHHHHHHHHHHHHHHc
Confidence 45777776665555566777888988776553322222222 22366676666542 256666655532
Q ss_pred -CCcEEEEcCCC
Q 014172 228 -KSRLLILCSPS 238 (429)
Q Consensus 228 -~~~~i~l~~p~ 238 (429)
+...|+-+...
T Consensus 82 g~id~vi~~Ag~ 93 (287)
T PRK06194 82 GAVHLLFNNAGV 93 (287)
T ss_pred CCCCEEEECCCC
Confidence 35555544433
No 420
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=56.81 E-value=79 Score=28.70 Aligned_cols=98 Identities=18% Similarity=0.189 Sum_probs=56.7
Q ss_pred EEEecChHHHHHHHHHHhcCCCCEEE----EcC-C-C--CC-----ChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhh
Q 014172 158 ILVSNGAKQSILQAVLAVCSPGDEVI----IPA-P-F--WV-----SYPEMARIADATPVILPTRISENFLLDPKVLESK 224 (429)
Q Consensus 158 i~~t~G~~~al~~~l~~l~~~gd~Vl----v~~-p-~--y~-----~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~ 224 (429)
++.-+||+.+..++.+++-+ .+.+. ++. . + |. -...+++..|...+.+++..+.. --.+++.+.
T Consensus 4 v~l~SGGKDS~lAl~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~g~~~--~~~~~l~~~ 80 (218)
T PF01902_consen 4 VALWSGGKDSCLALYRALRQ-HEVVCLLTMVPEEEDSYMFHGVNIELIEAQAEALGIPLIEIPTSGDEE--DYVEDLKEA 80 (218)
T ss_dssp EEE--SSHHHHHHHHHHHHT--EEEEEEEEEESTTT-SSS-STTGTCHHHHHHHHT--EEEEEE---CC--CHHHHHHHH
T ss_pred EEEEcCcHHHHHHHHHHHHh-CCccEEEEeccCCCCcccccccCHHHHHHHHHHCCCCEEEEEccCccc--hhhHHHHHH
Confidence 56678888888887777665 43211 111 1 1 11 23467788999998888752221 235667666
Q ss_pred ccc-CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE
Q 014172 225 LTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (429)
Q Consensus 225 l~~-~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi 266 (429)
++. +..+++ +|.+....++..+-++|.+. |+..+
T Consensus 81 l~~~~v~~vv-------~GdI~~~~~r~~~e~vc~~l-Gl~~~ 115 (218)
T PF01902_consen 81 LKELKVEAVV-------FGDIDSEYQRNWVERVCERL-GLEAV 115 (218)
T ss_dssp HCTC--SEEE---------TTS-HHHHHHHHHHHHHC-T-EEE
T ss_pred HHHcCCCEEE-------ECcCCcHHHHHHHHHHHHHc-CCEEE
Confidence 654 566666 79999999999999999999 88877
No 421
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=55.92 E-value=1.1e+02 Score=27.81 Aligned_cols=52 Identities=23% Similarity=0.245 Sum_probs=31.6
Q ss_pred CcEEEecChHHHHHHHHHHhcCCC--CEEEEcCCCCCChHHHHHHcCCEEEEecC
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVILPT 208 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~g--d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~ 208 (429)
..|+..+++..+..++..+-. .| -.|+++.-.-..-...++..|++++.++-
T Consensus 51 ~~vv~~ssGN~g~alA~~a~~-~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~ 104 (244)
T cd00640 51 GVIIESTGGNTGIALAAAAAR-LGLKCTIVMPEGASPEKVAQMRALGAEVVLVPG 104 (244)
T ss_pred CEEEEeCCcHHHHHHHHHHHH-cCCCEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 345555566766665544432 44 34555544433455678889999999874
No 422
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=55.38 E-value=23 Score=33.93 Aligned_cols=68 Identities=12% Similarity=0.186 Sum_probs=42.6
Q ss_pred HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEE
Q 014172 194 EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 267 (429)
Q Consensus 194 ~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~ 267 (429)
..+...+.++..+.+..+.+|.+......++-..... .++ .+.|-.++++++++|++.|+++ ++-||-
T Consensus 23 d~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g~~----~~~-~~~~~~yT~~di~elv~yA~~r-gI~viP 90 (303)
T cd02742 23 DVLARYKINTFHWHLTDDQAWRIESKKFPELAEKGGQ----INP-RSPGGFYTYAQLKDIIEYAAAR-GIEVIP 90 (303)
T ss_pred HHHHHhCCcEEEEeeecCCCceEeeCccchhhhhccc----ccC-CCCCCeECHHHHHHHHHHHHHc-CCEEEE
Confidence 4445667777777766555565554443332211110 111 2346689999999999999999 888883
No 423
>PRK06352 threonine synthase; Validated
Probab=53.93 E-value=1.2e+02 Score=29.74 Aligned_cols=105 Identities=17% Similarity=0.231 Sum_probs=53.9
Q ss_pred eEEcCCCCCCCCChHHHHHHHH-HHHHcCCCCCCCCCCCHHHHHHHHHHHHh-hcCCCCCCCcEEEecChHHHHHHHHHH
Q 014172 97 VIRLAAGEPDFDTPVLIAEAGI-NAIREGFTRYTPNAGTLELRSAICHKLKE-ENGLSYTPDQILVSNGAKQSILQAVLA 174 (429)
Q Consensus 97 ~i~L~~g~~~~~~p~~v~~a~~-~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~-~~g~~~~~~~i~~t~G~~~al~~~l~~ 174 (429)
.++|..|..++-..+.+.+... +.+-+ .-.+.| .|.-..|.+....... ..| ...|+..+++..+..+++.+
T Consensus 21 ~~~l~~G~TPL~~~~~l~~~~g~~l~~K-~E~~np-tGS~KdR~a~~~i~~a~~~g----~~~vV~aSsGN~G~AlA~~a 94 (351)
T PRK06352 21 MISLAEGNTPLIPLPNLSKELGVTLYGK-YEGLNP-TGSFKDRGMVMAVAKAKEEG----AEAVICASTGNTSAAAAAYA 94 (351)
T ss_pred ccccCCCCCCeeEcHhhHHHhCCeEEEE-ecCCCC-ccChHHHHHHHHHHHHHHCC----CCEEEEECCcHHHHHHHHHH
Confidence 5788888866543333332221 11101 112223 5666666555433221 123 24566656666666554443
Q ss_pred hcCCC--CEEEEcCCCC-CChHHHHHHcCCEEEEecC
Q 014172 175 VCSPG--DEVIIPAPFW-VSYPEMARIADATPVILPT 208 (429)
Q Consensus 175 l~~~g--d~Vlv~~p~y-~~~~~~~~~~g~~~~~v~~ 208 (429)
- ..| -.|++++... ..-...++.+|++++.++-
T Consensus 95 a-~~G~~~~ivvp~~~~~~~k~~~~~a~GA~V~~~~~ 130 (351)
T PRK06352 95 T-RAGLKAYIVIPEGKVALGKLAQAVMYGADIISIQG 130 (351)
T ss_pred H-HcCCcEEEEEeCCCCcHHHHHHHHhcCCEEEEECC
Confidence 3 234 4555555432 2344667899999998873
No 424
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=53.70 E-value=1.2e+02 Score=29.06 Aligned_cols=58 Identities=26% Similarity=0.303 Sum_probs=37.7
Q ss_pred CCCCHHHHHhhccc-----CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCccc
Q 014172 214 FLLDPKVLESKLTE-----KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI 274 (429)
Q Consensus 214 ~~~d~e~l~~~l~~-----~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~ 274 (429)
..++.++++..++. +...+++-+.+=|-|. +.+...+|+++|++. +..++.|-.-..+
T Consensus 109 p~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~--~~d~y~~li~~~~~~-g~~vilD~Sg~~L 171 (310)
T COG1105 109 PEISEAELEQFLEQLKALLESDDIVVLSGSLPPGV--PPDAYAELIRILRQQ-GAKVILDTSGEAL 171 (310)
T ss_pred CCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCC--CHHHHHHHHHHHHhc-CCeEEEECChHHH
Confidence 44666666654431 2222344445555554 577899999999999 9999999765543
No 425
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=52.77 E-value=2.1e+02 Score=28.93 Aligned_cols=76 Identities=21% Similarity=0.225 Sum_probs=45.3
Q ss_pred CCCHHHHHHHHHHHHhh-cCCCCCCCcEEEecChHHHHHHHHHHhcCCC--CEEEEcCCCCCChHHHHHHcCCEEEEecC
Q 014172 132 AGTLELRSAICHKLKEE-NGLSYTPDQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVILPT 208 (429)
Q Consensus 132 ~G~~~lr~~ia~~l~~~-~g~~~~~~~i~~t~G~~~al~~~l~~l~~~g--d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~ 208 (429)
.|.-..|.+........ .|.--..+.|+.+++|..+..++..+-. .| -.|+++...-..-...++.+|++++.++.
T Consensus 38 tGS~K~R~a~~~l~~a~~~g~~~~g~~vv~~ssGN~g~alA~~a~~-~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 116 (454)
T TIGR01137 38 GGSVKDRIALRMIEDAEASGRLKPGDTIIEPTSGNTGIGLALVAAI-KGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPT 116 (454)
T ss_pred CcchHHHHHHHHHHHHHHcCCCCCCCEEEEeCCcHHHHHHHHHHHH-cCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCC
Confidence 46667776644332221 2321122457777778888776655542 34 45556554433456788999999999874
No 426
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=52.59 E-value=29 Score=33.41 Aligned_cols=62 Identities=10% Similarity=0.140 Sum_probs=38.2
Q ss_pred HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEE
Q 014172 194 EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 267 (429)
Q Consensus 194 ~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~ 267 (429)
+.+...+.++....+..+.+|.+......+.-... ..|..++++++++|++.|+++ ++-||-
T Consensus 25 d~ma~~KlN~lh~HltDd~~~rle~~~~P~lt~~g-----------~~~~~yT~~di~elv~yA~~r-gI~vIP 86 (311)
T cd06570 25 DAMASVKLNVFHWHLTDDQGFRIESKKYPKLQQKA-----------SDGLYYTQEQIREVVAYARDR-GIRVVP 86 (311)
T ss_pred HHHHHhCCeEEEEEEecCCCceeecCCCccccccC-----------CCCCccCHHHHHHHHHHHHHc-CCEEEE
Confidence 33445566666666544445554433332211100 135679999999999999999 998883
No 427
>PRK07063 short chain dehydrogenase; Provisional
Probab=51.90 E-value=1.5e+02 Score=27.08 Aligned_cols=97 Identities=13% Similarity=0.055 Sum_probs=49.0
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHH-----cCCEEEEecCCCCCCCCCCHHHHHhhccc-
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI-----ADATPVILPTRISENFLLDPKVLESKLTE- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~-----~g~~~~~v~~~~~~~~~~d~e~l~~~l~~- 227 (429)
....+++|.|+...-..+...|++.|..|++..-.-......... .+.++..+..+.. |.+.+++.+..
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~ 80 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVT-----DAASVAAAVAAA 80 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCC-----CHHHHHHHHHHH
Confidence 345677777766555566777888898877654322222222222 3455656655432 45555554431
Q ss_pred -----CCcEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 228 -----KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 228 -----~~~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
+...++-+....+.+ ...+.+++++..+
T Consensus 81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~ 115 (260)
T PRK07063 81 EEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFA 115 (260)
T ss_pred HHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 345554433322222 2345555655443
No 428
>PRK06483 dihydromonapterin reductase; Provisional
Probab=51.37 E-value=1.6e+02 Score=26.31 Aligned_cols=52 Identities=17% Similarity=0.123 Sum_probs=29.5
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecC
Q 014172 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPT 208 (429)
Q Consensus 157 ~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~ 208 (429)
.+++|.|+...-..+...|.+.|.+|++..-.-......++..|+..+..++
T Consensus 4 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~ 55 (236)
T PRK06483 4 PILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADF 55 (236)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCC
Confidence 4677766665555566677788887766543322333344445655444443
No 429
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=50.34 E-value=1.8e+02 Score=27.80 Aligned_cols=76 Identities=9% Similarity=0.166 Sum_probs=50.3
Q ss_pred EEcCCCCCChHHHHHH--cCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCC-CCccCCCCHHHHHHHHHHHHh
Q 014172 183 IIPAPFWVSYPEMARI--ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPS-NPTGSVYPKNLLDEIARIVAK 259 (429)
Q Consensus 183 lv~~p~y~~~~~~~~~--~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~-NPtG~~~~~~~l~~I~~~a~~ 259 (429)
+.--|+|++..+.... ...-++.+|.. .-++.+++....+.+.+++.+-. ..+| ..+.+.++|++
T Consensus 52 i~G~~~y~sv~dlp~~~~~DlAvI~vPa~------~v~~al~e~~~~Gvk~~vIisaGf~e~g------~~~~~~~~ar~ 119 (300)
T PLN00125 52 HLGLPVFNTVAEAKAETKANASVIYVPPP------FAAAAILEAMEAELDLVVCITEGIPQHD------MVRVKAALNRQ 119 (300)
T ss_pred EcCeeccCCHHHHhhccCCCEEEEecCHH------HHHHHHHHHHHcCCCEEEEECCCCCccc------HHHHHHHHHhh
Confidence 3577888888887765 35555666531 25788888888888877664443 3444 34556678999
Q ss_pred CCCeEEEEccCC
Q 014172 260 HPRLLVLSDEIY 271 (429)
Q Consensus 260 ~~~i~vi~Deay 271 (429)
+ ++.||==.+.
T Consensus 120 ~-girviGPNc~ 130 (300)
T PLN00125 120 S-KTRLIGPNCP 130 (300)
T ss_pred c-CCEEECCCCc
Confidence 9 9999843333
No 430
>PRK08197 threonine synthase; Validated
Probab=50.25 E-value=2e+02 Score=28.58 Aligned_cols=106 Identities=13% Similarity=0.089 Sum_probs=55.1
Q ss_pred eEEcCCCCCCCCChHHHHHHHH--HHHHcCCCCCCCCCCCHHHHHHHHHHHH-hhcCCCCCCCcEEEecChHHHHHHHHH
Q 014172 97 VIRLAAGEPDFDTPVLIAEAGI--NAIREGFTRYTPNAGTLELRSAICHKLK-EENGLSYTPDQILVSNGAKQSILQAVL 173 (429)
Q Consensus 97 ~i~L~~g~~~~~~p~~v~~a~~--~~~~~~~~~Y~~~~G~~~lr~~ia~~l~-~~~g~~~~~~~i~~t~G~~~al~~~l~ 173 (429)
.++|+-|..++-..+.+.+.+- +.+-+ .-.+.| .|.-..|.+...... ...| ...|+..+++..+..++..
T Consensus 72 ~vslgeG~TPL~~~~~l~~~~G~~~l~~K-~E~~nP-tGSfKdRga~~~i~~a~~~g----~~~vv~aSsGN~g~alA~~ 145 (394)
T PRK08197 72 IVSLGEGMTPLLPLPRLGKALGIGRLWVK-DEGLNP-TGSFKARGLAVGVSRAKELG----VKHLAMPTNGNAGAAWAAY 145 (394)
T ss_pred CCccCcCCCCceEhHHHHHHhCCCcEEEE-eCCCCC-CcCcHHhHHHHHHHHHHHcC----CCEEEEeCCcHHHHHHHHH
Confidence 4777777755433333333221 11111 112223 455555543332211 1223 3567777777777776655
Q ss_pred Hhc-CCCCEEEEcCCCCCChHHHHHHcCCEEEEecC
Q 014172 174 AVC-SPGDEVIIPAPFWVSYPEMARIADATPVILPT 208 (429)
Q Consensus 174 ~l~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~ 208 (429)
+-. .-.-.|+++.-.-..-...++.+|++++.++-
T Consensus 146 aa~~G~~~~v~vp~~~~~~k~~~~~~~GA~Vi~v~~ 181 (394)
T PRK08197 146 AARAGIRATIFMPADAPEITRLECALAGAELYLVDG 181 (394)
T ss_pred HHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Confidence 542 22245666654434456778899999999974
No 431
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=49.99 E-value=1.7e+02 Score=26.58 Aligned_cols=31 Identities=16% Similarity=0.147 Sum_probs=20.9
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEc
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIP 185 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~ 185 (429)
...+++|.|+...-..+...|.+.|..|++.
T Consensus 7 ~k~~lItGas~gIG~~~a~~l~~~G~~v~~~ 37 (255)
T PRK06463 7 GKVALITGGTRGIGRAIAEAFLREGAKVAVL 37 (255)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence 3457777766655555677778888777654
No 432
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=49.87 E-value=1.8e+02 Score=27.77 Aligned_cols=86 Identities=17% Similarity=0.176 Sum_probs=45.9
Q ss_pred CCCC-cEEEecChHHHHHHHHHHhcCCC-CEEEEcCCCCC-ChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCC
Q 014172 153 YTPD-QILVSNGAKQSILQAVLAVCSPG-DEVIIPAPFWV-SYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKS 229 (429)
Q Consensus 153 ~~~~-~i~~t~G~~~al~~~l~~l~~~g-d~Vlv~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~ 229 (429)
+.|. .|+=.++++.+|.+++.+-. .| ..+++...+.. .....++.+|++++.+|..+ ++..=-.+.+++.....+
T Consensus 59 l~pG~tIVE~TSGNTGI~LA~vaa~-~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~~~-g~~~~a~~~a~el~~~~p 136 (300)
T COG0031 59 LKPGGTIVEATSGNTGIALAMVAAA-KGYRLIIVMPETMSQERRKLLRALGAEVILTPGAP-GNMKGAIERAKELAAEIP 136 (300)
T ss_pred CCCCCEEEEcCCChHHHHHHHHHHH-cCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCCCC-CchHHHHHHHHHHHHhCC
Confidence 4554 45545556666776655543 45 33333333333 45678999999999998622 211112333333444444
Q ss_pred c-EEEEcCCCCC
Q 014172 230 R-LLILCSPSNP 240 (429)
Q Consensus 230 ~-~i~l~~p~NP 240 (429)
. +++.+...||
T Consensus 137 ~~~~~~~Qf~Np 148 (300)
T COG0031 137 GYAVWLNQFENP 148 (300)
T ss_pred CceEchhhcCCC
Confidence 4 6665444443
No 433
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=49.69 E-value=1.6e+02 Score=26.37 Aligned_cols=77 Identities=13% Similarity=0.063 Sum_probs=41.2
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc------cCC
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT------EKS 229 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~------~~~ 229 (429)
..+++|.|+...-..+...|++.|..|.+...............+.++..++.+- -|.+.+++.+. .+.
T Consensus 7 ~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~i 81 (245)
T PRK12936 7 RKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANL-----SDRDEVKALGQKAEADLEGV 81 (245)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccC-----CCHHHHHHHHHHHHHHcCCC
Confidence 4567776655545556777888888776654433233333333454555555432 14555555432 245
Q ss_pred cEEEEcCC
Q 014172 230 RLLILCSP 237 (429)
Q Consensus 230 ~~i~l~~p 237 (429)
..++-+..
T Consensus 82 d~vi~~ag 89 (245)
T PRK12936 82 DILVNNAG 89 (245)
T ss_pred CEEEECCC
Confidence 66665443
No 434
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=49.25 E-value=2.5e+02 Score=26.98 Aligned_cols=83 Identities=18% Similarity=0.153 Sum_probs=45.2
Q ss_pred CcEEEecChHHHHHHHHHHhcCCC--CEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccC-CcEE
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEK-SRLL 232 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~g--d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~-~~~i 232 (429)
..|+..+++..+..++..+-. .| -.|+++.-.-..-...++.+|++++.++-+ +.-+...+.+.+..+ +...
T Consensus 52 ~~vv~aSsGN~g~alA~~a~~-~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~----~~~~~~~~~~~l~~~~~~~~ 126 (316)
T cd06448 52 VHVVCSSGGNAGLAAAYAARK-LGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV----WWEADNYLREELAENDPGPV 126 (316)
T ss_pred CeEEEeCCcHHHHHHHHHHHH-cCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc----hHHHHHHHHHHHHhccCCcE
Confidence 457766777777776655432 34 345555543334467888999999988632 101222333333333 2455
Q ss_pred EEcCCCCCccC
Q 014172 233 ILCSPSNPTGS 243 (429)
Q Consensus 233 ~l~~p~NPtG~ 243 (429)
++...+||.+.
T Consensus 127 ~~~~~~n~~~~ 137 (316)
T cd06448 127 YVHPFDDPLIW 137 (316)
T ss_pred EeCCCCCchhh
Confidence 55443566543
No 435
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=48.79 E-value=81 Score=29.81 Aligned_cols=54 Identities=15% Similarity=0.175 Sum_probs=35.2
Q ss_pred CcEEEecChHHHHHHHHHHh-cCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCC
Q 014172 156 DQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPTR 209 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~ 209 (429)
..|+..+++..+...+..+- +.---.|+++.-.-..-...++.+|++++.++..
T Consensus 54 ~~vv~~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~ 108 (291)
T cd01561 54 TTIIEPTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEA 108 (291)
T ss_pred CEEEEeCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 44677777777777655543 2222456666544455667889999999999853
No 436
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=48.76 E-value=2.2e+02 Score=26.18 Aligned_cols=148 Identities=14% Similarity=0.150 Sum_probs=77.2
Q ss_pred HHHHHHhcCCCeEEcCCCCCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEe--c
Q 014172 86 QATALAQAGVSVIRLAAGEPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVS--N 162 (429)
Q Consensus 86 ~~~~~~~~g~~~i~L~~g~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t--~ 162 (429)
.++.+... .+.|-|+.-.++... -+.+.++..+++.++. .++-+++.+. ...++ ++.+ +
T Consensus 23 ~~~~l~~~-ad~iElgip~sdp~adG~~i~~~~~~a~~~g~---------~~~v~~vr~~----~~~Pl----~lM~y~n 84 (244)
T PRK13125 23 FIIGLVEL-VDILELGIPPKYPKYDGPVIRKSHRKVKGLDI---------WPLLEEVRKD----VSVPI----ILMTYLE 84 (244)
T ss_pred HHHHHHhh-CCEEEECCCCCCCCCCCHHHHHHHHHHHHcCc---------HHHHHHHhcc----CCCCE----EEEEecc
Confidence 34444444 678888774444322 3566666666665432 4444444432 12221 2221 1
Q ss_pred ChHHHHHHHHHHhcCCC-CEEEEcCCCCC------ChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEc
Q 014172 163 GAKQSILQAVLAVCSPG-DEVIIPAPFWV------SYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC 235 (429)
Q Consensus 163 G~~~al~~~l~~l~~~g-d~Vlv~~p~y~------~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~ 235 (429)
--.......+..+.+.| |.|++++-.+. .+...++..|.++...= ++. -+.+.++..+......+++
T Consensus 85 ~~~~~~~~~i~~~~~~Gadgvii~dlp~e~~~~~~~~~~~~~~~Gl~~~~~v-~p~----T~~e~l~~~~~~~~~~l~m- 158 (244)
T PRK13125 85 DYVDSLDNFLNMARDVGADGVLFPDLLIDYPDDLEKYVEIIKNKGLKPVFFT-SPK----FPDLLIHRLSKLSPLFIYY- 158 (244)
T ss_pred hhhhCHHHHHHHHHHcCCCEEEECCCCCCcHHHHHHHHHHHHHcCCCEEEEE-CCC----CCHHHHHHHHHhCCCEEEE-
Confidence 12223333455555555 77888752221 24456778899875543 222 2678888777655556655
Q ss_pred CCCCCccCCCCHHHHHHHHHHH
Q 014172 236 SPSNPTGSVYPKNLLDEIARIV 257 (429)
Q Consensus 236 ~p~NPtG~~~~~~~l~~I~~~a 257 (429)
+.++-||..+..+-.+.+.++.
T Consensus 159 sv~~~~g~~~~~~~~~~i~~lr 180 (244)
T PRK13125 159 GLRPATGVPLPVSVERNIKRVR 180 (244)
T ss_pred EeCCCCCCCchHHHHHHHHHHH
Confidence 6666678766554333444443
No 437
>PRK06721 threonine synthase; Reviewed
Probab=48.10 E-value=2.8e+02 Score=27.15 Aligned_cols=71 Identities=20% Similarity=0.201 Sum_probs=41.7
Q ss_pred CCCHHHHHHHHHHHHh-hcCCCCCCCcEEEecChHHHHHHHHHHhcCCC--CEEEEcCCC-CCChHHHHHHcCCEEEEec
Q 014172 132 AGTLELRSAICHKLKE-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPF-WVSYPEMARIADATPVILP 207 (429)
Q Consensus 132 ~G~~~lr~~ia~~l~~-~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~g--d~Vlv~~p~-y~~~~~~~~~~g~~~~~v~ 207 (429)
.|.-..|.+....... ..| ...|+..+++..++.++..+- ..| -.|+++... -..-...++.+|++++.++
T Consensus 55 tGS~KdR~a~~~i~~a~~~g----~~~vV~aSsGN~G~alA~~aa-~~G~~~~vvvp~~~~~~~k~~~~~~~GA~V~~~~ 129 (352)
T PRK06721 55 TGSFKDRGMVMAVAKAKEEG----SEAIICASTGNTSASAAAYAA-RLGMKCIIVIPEGKIAHGKLAQAVAYGAEIISIE 129 (352)
T ss_pred ccchHHHHHHHHHHHHHHCC----CCEEEEECCcHHHHHHHHHHH-HCCCcEEEEECCCCCCHHHHHHHHHcCCEEEEEC
Confidence 4666666665543322 222 245666667777776554443 234 345555543 2345567889999999987
No 438
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=47.83 E-value=2.1e+02 Score=25.75 Aligned_cols=95 Identities=18% Similarity=0.317 Sum_probs=58.2
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCC-ChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcE
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV-SYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRL 231 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~ 231 (429)
+....|++..||..+..- +..|++.|..|.+-.|... .....++..+ +..+. +. .+++.+.. .-+
T Consensus 10 l~~k~VlvvGgG~va~rK-a~~ll~~ga~v~Vvs~~~~~el~~~~~~~~--i~~~~----~~--~~~~~~~~-----~~l 75 (210)
T COG1648 10 LEGKKVLVVGGGSVALRK-ARLLLKAGADVTVVSPEFEPELKALIEEGK--IKWIE----RE--FDAEDLDD-----AFL 75 (210)
T ss_pred cCCCEEEEECCCHHHHHH-HHHHHhcCCEEEEEcCCccHHHHHHHHhcC--cchhh----cc--cChhhhcC-----ceE
Confidence 455678999999988885 5778899999999999882 2333333333 11221 11 45555432 334
Q ss_pred EEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEE-EEccC
Q 014172 232 LILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLV-LSDEI 270 (429)
Q Consensus 232 i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~v-i~Dea 270 (429)
+++++. +.+.=++|.+.|+++ ++++ +.|++
T Consensus 76 viaAt~--------d~~ln~~i~~~a~~~-~i~vNv~D~p 106 (210)
T COG1648 76 VIAATD--------DEELNERIAKAARER-RILVNVVDDP 106 (210)
T ss_pred EEEeCC--------CHHHHHHHHHHHHHh-CCceeccCCc
Confidence 444333 344568899999998 6554 34444
No 439
>PRK08329 threonine synthase; Validated
Probab=47.79 E-value=2.5e+02 Score=27.36 Aligned_cols=73 Identities=11% Similarity=0.136 Sum_probs=42.6
Q ss_pred CCCHHHHHHHHHHHH-hhcCCCCCCCcEEEecChHHHHHHHHHHhc-CCCCEEEEcCCCCCChHHHHHHcCCEEEEecC
Q 014172 132 AGTLELRSAICHKLK-EENGLSYTPDQILVSNGAKQSILQAVLAVC-SPGDEVIIPAPFWVSYPEMARIADATPVILPT 208 (429)
Q Consensus 132 ~G~~~lr~~ia~~l~-~~~g~~~~~~~i~~t~G~~~al~~~l~~l~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~ 208 (429)
.|.-..|.+...... +..| .+.|+..+++..+..++..+-. .-.-.|+++...-..-...++.+|++++.++-
T Consensus 84 tGSfKdRga~~~i~~a~~~g----~~~vv~aSsGN~g~alA~~aa~~G~~~~v~vp~~~~~~k~~~~~~~GA~v~~v~~ 158 (347)
T PRK08329 84 TGSFKDRGTYVTVAKLKEEG----INEVVIDSSGNAALSLALYSLSEGIKVHVFVSYNASKEKISLLSRLGAELHFVEG 158 (347)
T ss_pred CcCCHHHHHHHHHHHHHHcC----CCEEEEECCCcHHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECC
Confidence 465555554432211 1223 2567777777777776655542 22245666654433456788899999999973
No 440
>PRK08339 short chain dehydrogenase; Provisional
Probab=47.79 E-value=1.6e+02 Score=27.15 Aligned_cols=34 Identities=12% Similarity=0.171 Sum_probs=22.2
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCC
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAP 187 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p 187 (429)
....+++|.|+...-..+...|.+.|.+|++..-
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r 40 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSR 40 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeC
Confidence 3345677766655555567777888988776543
No 441
>PRK05638 threonine synthase; Validated
Probab=47.55 E-value=3e+02 Score=27.90 Aligned_cols=72 Identities=11% Similarity=0.015 Sum_probs=42.2
Q ss_pred CCCHHHHHHHHHHHH-hhcCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCEEEEcCCCCCChHHHHHHcCCEEEEec
Q 014172 132 AGTLELRSAICHKLK-EENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILP 207 (429)
Q Consensus 132 ~G~~~lr~~ia~~l~-~~~g~~~~~~~i~~t~G~~~al~~~l~~l-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~ 207 (429)
.|.-..|.+...... ... ....|+..+++..+..++..+- ..-.-.|++|.-.-..-...++.+|++++.++
T Consensus 92 tGSfKdR~a~~~i~~a~~~----g~~~vv~aSsGN~g~alA~~aa~~G~~~~i~vp~~~~~~k~~~~~~~GA~vi~v~ 165 (442)
T PRK05638 92 TGSFRDRLATVAVSYGLPY----AANGFIVASDGNAAASVAAYSARAGKEAFVVVPRKVDKGKLIQMIAFGAKIIRYG 165 (442)
T ss_pred CCChHHHHHHHHHHHHHHc----CCCEEEEeCCChHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHhcCcEEEEEC
Confidence 566666654332221 112 2356777777777777665543 22224566665443344578889999999996
No 442
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=47.46 E-value=1.4e+02 Score=27.17 Aligned_cols=67 Identities=4% Similarity=0.040 Sum_probs=38.3
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCC-ChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV-SYPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
...+++|.|+...-..+...|++.|..|++....-. ......+..+.++..+..+- -|.+.+++.+.
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~ 75 (251)
T PRK12481 8 GKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADL-----IQQKDIDSIVS 75 (251)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCC-----CCHHHHHHHHH
Confidence 346777777766666667778889988876542211 11222334566666665543 25555555543
No 443
>PRK04210 phosphoenolpyruvate carboxykinase; Provisional
Probab=47.38 E-value=1.8e+02 Score=30.45 Aligned_cols=107 Identities=17% Similarity=0.302 Sum_probs=71.0
Q ss_pred CHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCC----C---CChHHHHHHcCCEEEEe
Q 014172 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF----W---VSYPEMARIADATPVIL 206 (429)
Q Consensus 134 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~----y---~~~~~~~~~~g~~~~~v 206 (429)
.++|++.|++...- ..|+.|+++.|+.+=...+...+++.|..+-+..+. | ....+.++.-....+..
T Consensus 10 n~~l~~wv~e~~~l-----~~Pd~v~~cdGS~ee~~~l~~~~v~~G~~~~L~~~k~~~~~~~rsdp~DvARve~rTfI~s 84 (601)
T PRK04210 10 NPKLLEWVAEVAEL-----TQPDRVVWCDGSEEEYDRLRDQAVEAGTEIKLNPEKRPNSFLARSDPSDVARVEDRTFICS 84 (601)
T ss_pred CHHHHHHHHHHHHh-----hCCCEEEEeCCCHHHHHHHHHHHHHcCCEeeccCCCCCceeeccCChhhhhhcccceEEec
Confidence 46788888877652 489999999999999888888899999887775543 3 33446666666665554
Q ss_pred cCC----CCCCCCCCHHHHHhhccc------CCc-EEEEcCCCCCccCCCC
Q 014172 207 PTR----ISENFLLDPKVLESKLTE------KSR-LLILCSPSNPTGSVYP 246 (429)
Q Consensus 207 ~~~----~~~~~~~d~e~l~~~l~~------~~~-~i~l~~p~NPtG~~~~ 246 (429)
+-. +.++| .+++++++.+.+ +-| +.++..---|.|..++
T Consensus 85 ~~~~dagp~nnw-~~p~e~~~~l~~lf~G~M~GRTMyVipfsmGP~gSp~s 134 (601)
T PRK04210 85 EKEEDAGPTNNW-MDPAEMRETLKGLFKGCMRGRTMYVVPFSMGPLGSPFA 134 (601)
T ss_pred CchhhcCCccCc-CCHHHHHHHHHHhcCCccCCCeEEEeeeeeCCCCCCcc
Confidence 322 22344 588988888753 223 4444444456666554
No 444
>PRK05867 short chain dehydrogenase; Provisional
Probab=47.35 E-value=1.8e+02 Score=26.33 Aligned_cols=67 Identities=15% Similarity=0.146 Sum_probs=37.1
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCCCCHHHHHhhc
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKL 225 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l 225 (429)
....+++|.|+...-..+...|.+.|.+|++..-.-...... ++..+.++..+..+. -|.+.+++.+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~ 77 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDV-----SQHQQVTSML 77 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccC-----CCHHHHHHHH
Confidence 334677777666555556677788898877654332222222 223355665555532 2555555544
No 445
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=47.18 E-value=29 Score=34.02 Aligned_cols=64 Identities=13% Similarity=0.127 Sum_probs=41.5
Q ss_pred HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEE
Q 014172 194 EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 267 (429)
Q Consensus 194 ~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~ 267 (429)
..+...+.++..+.+..+.+|.+......++.... ....|-.++++++++|++.|+++ +|-||-
T Consensus 25 d~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~~g---------a~~~~~~YT~~di~eiv~yA~~r-gI~vIP 88 (348)
T cd06562 25 DAMAYNKLNVLHWHITDSQSFPLESPSYPELSKKG---------AYSPSEVYTPEDVKEIVEYARLR-GIRVIP 88 (348)
T ss_pred HHHHHhCCcEEEEeEEcCCCceEeeCCCchhhhcc---------CcCCCceECHHHHHHHHHHHHHc-CCEEEE
Confidence 34445667776666655555665554443322111 11246788999999999999999 888883
No 446
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=47.08 E-value=1.7e+02 Score=29.29 Aligned_cols=95 Identities=13% Similarity=0.042 Sum_probs=48.0
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEE
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLI 233 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~ 233 (429)
....+++|.|+...-..+...+.+.|.+|++..-.-..........+..+..+..+. -|.+.+.+.+. +...++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dv-----sd~~~v~~~l~-~IDiLI 250 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQV-----GQEAALAELLE-KVDILI 250 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeC-----CCHHHHHHHhC-CCCEEE
Confidence 345677776665555555667778888776544221111111111122233333321 15666766654 466666
Q ss_pred EcCCCCCccCCCCHHHHHHHHH
Q 014172 234 LCSPSNPTGSVYPKNLLDEIAR 255 (429)
Q Consensus 234 l~~p~NPtG~~~~~~~l~~I~~ 255 (429)
.+...++.+ ..+.+++++..+
T Consensus 251 nnAGi~~~~-~~s~e~~~~~~~ 271 (406)
T PRK07424 251 INHGINVHG-ERTPEAINKSYE 271 (406)
T ss_pred ECCCcCCCC-CCCHHHHHHHHH
Confidence 555444444 346555555544
No 447
>PRK05876 short chain dehydrogenase; Provisional
Probab=47.03 E-value=1.7e+02 Score=27.27 Aligned_cols=66 Identities=9% Similarity=-0.001 Sum_probs=37.5
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHH---HHcCCEEEEecCCCCCCCCCCHHHHHhhc
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA---RIADATPVILPTRISENFLLDPKVLESKL 225 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~e~l~~~l 225 (429)
...+++|.|+...-..+...|...|..|++..-.-....... +..|.++..+..+-. |.+.+++.+
T Consensus 6 ~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~ 74 (275)
T PRK05876 6 GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVR-----HREEVTHLA 74 (275)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCC-----CHHHHHHHH
Confidence 346777777666556667777888987776543222222222 234666666665432 556665544
No 448
>PRK05872 short chain dehydrogenase; Provisional
Probab=46.94 E-value=1.7e+02 Score=27.51 Aligned_cols=96 Identities=8% Similarity=0.079 Sum_probs=49.5
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHc--CCEEEEecCCCCCCCCCCHHHHHhhcc-----
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA--DATPVILPTRISENFLLDPKVLESKLT----- 226 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~--g~~~~~v~~~~~~~~~~d~e~l~~~l~----- 226 (429)
....+++|.|+...-..+...+.+.|..|++..-.-.......+.. +.++..+.++- -|.+.+++.+.
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 82 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADV-----TDLAAMQAAAEEAVER 82 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecC-----CCHHHHHHHHHHHHHH
Confidence 4456777777666556667777888988777654322233333333 34555544432 25565555443
Q ss_pred -cCCcEEEEcCCCCCccC--CCCHHHHHHHH
Q 014172 227 -EKSRLLILCSPSNPTGS--VYPKNLLDEIA 254 (429)
Q Consensus 227 -~~~~~i~l~~p~NPtG~--~~~~~~l~~I~ 254 (429)
.+...++.+......+. ..+.+++++..
T Consensus 83 ~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~ 113 (296)
T PRK05872 83 FGGIDVVVANAGIASGGSVAQVDPDAFRRVI 113 (296)
T ss_pred cCCCCEEEECCCcCCCcCcccCCHHHHHHHH
Confidence 24455554333222221 23555565543
No 449
>PLN00191 enolase
Probab=46.83 E-value=62 Score=33.02 Aligned_cols=97 Identities=16% Similarity=0.133 Sum_probs=60.6
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEcCCCCCC-hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCc
Q 014172 163 GAKQSILQAVLAVCSPGDEVIIPAPFWVS-YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPT 241 (429)
Q Consensus 163 G~~~al~~~l~~l~~~gd~Vlv~~p~y~~-~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPt 241 (429)
.+.+++. .+..++++-+.+.+++|.... +..+.++... ..+|+-.++.+..+++.+++.+..+..-+++.-++. .
T Consensus 296 s~~e~i~-~~~~L~~~y~I~~IEDPl~~~D~eg~~~Lt~~--~~ipIvgDE~~vtn~~~l~~~I~~~aad~i~iKl~q-i 371 (457)
T PLN00191 296 SGDELID-LYKEFVSDYPIVSIEDPFDQDDWEHWAKLTSL--EDVQIVGDDLLVTNPKRVAKAIQEKACNALLLKVNQ-I 371 (457)
T ss_pred CHHHHHH-HHHHHhhcCCcEEEECCCCcccHHHHHHHHcc--CCCcEEccCcccCCHHHHHHHHHhCCCCEEEecccc-c
Confidence 4556666 566667665678999998654 3333333322 223332223344579999998887655445444544 4
Q ss_pred cCCCCHHHHHHHHHHHHhCCCeEEEE
Q 014172 242 GSVYPKNLLDEIARIVAKHPRLLVLS 267 (429)
Q Consensus 242 G~~~~~~~l~~I~~~a~~~~~i~vi~ 267 (429)
|.+.. ..+++++|+++ ++.+++
T Consensus 372 GGITe---a~~~a~lA~~~-G~~~~i 393 (457)
T PLN00191 372 GTVTE---SIEAVKMSKAA-GWGVMT 393 (457)
T ss_pred CCHHH---HHHHHHHHHHC-CCEEEe
Confidence 54444 78899999999 888875
No 450
>PRK06260 threonine synthase; Validated
Probab=46.54 E-value=2.3e+02 Score=28.27 Aligned_cols=52 Identities=17% Similarity=0.136 Sum_probs=31.2
Q ss_pred CcEEEecChHHHHHHHHHHhcCCC--CEEEEcCC-CCCChHHHHHHcCCEEEEecC
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPG--DEVIIPAP-FWVSYPEMARIADATPVILPT 208 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~g--d~Vlv~~p-~y~~~~~~~~~~g~~~~~v~~ 208 (429)
+.|+..+++..+..++..+- ..| -.|+++.. .-..-...++.+|++++.++-
T Consensus 116 ~~vv~aSsGN~g~alA~~aa-~~G~~~~i~vP~~~~~~~k~~~~~~~GA~vi~v~~ 170 (397)
T PRK06260 116 KTVACASTGNTSASLAAYAA-RAGLKCYVLLPAGKVALGKLAQALLHGAKVLEVDG 170 (397)
T ss_pred CEEEEeCCcHHHHHHHHHHH-HcCCcEEEEEeCCCccHHHHHHHHhcCCEEEEECC
Confidence 46666666666666554443 234 34555543 222344567789999999974
No 451
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=46.41 E-value=1.8e+02 Score=27.70 Aligned_cols=106 Identities=12% Similarity=0.223 Sum_probs=64.7
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCC--EEEEcC--CCCCChHHHHHH--cCCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGD--EVIIPA--PFWVSYPEMARI--ADATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd--~Vlv~~--p~y~~~~~~~~~--~g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
+-.++|++|.|++..+...+....++|. .|+|.+ |.+.++..+..+ .|++...++ |. .+-+.+.
T Consensus 160 ihsnEviLT~g~SrTV~~FL~~A~kk~Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI~---------da-aVfA~Ms 229 (353)
T KOG1465|consen 160 IHSNEVILTLGSSRTVENFLKHAAKKGRKFRVIVAEGAPNNQGHELAKPLAQAGIETTVIP---------DA-AVFAMMS 229 (353)
T ss_pred hccCceEEecCccHHHHHHHHHHHhccCceEEEEeecCCcccchHhhHHHHHcCCeeEEec---------cH-HHHHHhh
Confidence 3457899999998888888777777763 455544 555555444443 467766665 22 2333333
Q ss_pred cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEcc
Q 014172 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDE 269 (429)
Q Consensus 227 ~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~De 269 (429)
.-.|+|+-++.--+-|.+....-...++..|++| -+.|++=.
T Consensus 230 rVnKVIigt~avl~NGgl~~~~G~~~vAlaAk~h-~vPv~VlA 271 (353)
T KOG1465|consen 230 RVNKVIIGTHAVLANGGLRAPSGVHTVALAAKHH-SVPVIVLA 271 (353)
T ss_pred hcceEEEEeeeEecCCCeeccchHHHHHHHHHhc-CCcEEEec
Confidence 2234444444433445555555677788888888 77777543
No 452
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=45.84 E-value=3.3e+02 Score=27.40 Aligned_cols=67 Identities=18% Similarity=0.182 Sum_probs=42.3
Q ss_pred HHHHHHHHHHhhcCCCCCCCcE-EEecChHHHHHHHHHHhcCCC-CEEEEcCCCCCChHHHHHHcCCEEEEe
Q 014172 137 LRSAICHKLKEENGLSYTPDQI-LVSNGAKQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIADATPVIL 206 (429)
Q Consensus 137 lr~~ia~~l~~~~g~~~~~~~i-~~t~G~~~al~~~l~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v 206 (429)
.--+..+...+.+|- +...++ +++.| +...++...|...| ..|.+.+=++.-....++.+|++++.+
T Consensus 161 i~saAv~lA~~~~~~-L~~~~vlvIGAG--em~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~l 229 (414)
T COG0373 161 ISSAAVELAKRIFGS-LKDKKVLVIGAG--EMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVAL 229 (414)
T ss_pred hHHHHHHHHHHHhcc-cccCeEEEEccc--HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeecH
Confidence 333333444444551 233333 44444 34555678888888 889999999988888999998665443
No 453
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=45.84 E-value=2.8e+02 Score=26.55 Aligned_cols=102 Identities=10% Similarity=0.162 Sum_probs=59.1
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCC--EEEEc--CCCCCChH--HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGD--EVIIP--APFWVSYP--EMARIADATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd--~Vlv~--~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
+...++++|.|.+.+...++....+.|. +|++. .|.+.+.. ..++.+|.++..++- -. +...+
T Consensus 117 i~dg~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~~~ak~L~~~gI~~~~I~D---------sa-~~~~~- 185 (301)
T COG1184 117 IHDGDVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEGRIMAKELRQSGIPVTVIVD---------SA-VGAFM- 185 (301)
T ss_pred ccCCCEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchHHHHHHHHHHcCCceEEEec---------hH-HHHHH-
Confidence 4567899999988888778888777775 55554 37777654 345667877777652 11 11111
Q ss_pred cCCcEEEE-cCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE
Q 014172 227 EKSRLLIL-CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (429)
Q Consensus 227 ~~~~~i~l-~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi 266 (429)
++...+++ ...----|.++++-----|+..|+++ +.+++
T Consensus 186 ~~vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~-~~Pf~ 225 (301)
T COG1184 186 SRVDKVLVGADAILANGALVNKIGTSPLALAAREL-RVPFY 225 (301)
T ss_pred HhCCEEEECccceecCCcEEeccchHHHHHHHHHh-CCCEE
Confidence 23333333 11111224555544445677788887 66555
No 454
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=45.73 E-value=1.7e+02 Score=27.59 Aligned_cols=38 Identities=26% Similarity=0.382 Sum_probs=25.1
Q ss_pred CCcEEEEcCCCCCccCCCCHHHHHHHHHHHH----hCCCeEEEEccCCc
Q 014172 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVA----KHPRLLVLSDEIYE 272 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~----~~~~i~vi~Deay~ 272 (429)
..++|+ ||..-+.++.+.|+++.+ +||++++++|=+-+
T Consensus 73 ~~davl-------tGYlgs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMG 114 (281)
T COG2240 73 ECDAVL-------TGYLGSAEQVRAIAGIVKAVKEANPNALYLCDPVMG 114 (281)
T ss_pred ccCEEE-------EccCCCHHHHHHHHHHHHHHhccCCCeEEEeCCccc
Confidence 355666 777777777777766554 35677777775544
No 455
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=45.66 E-value=1.5e+02 Score=29.82 Aligned_cols=93 Identities=13% Similarity=0.163 Sum_probs=52.7
Q ss_pred CcEEEecChHHHHHHHHHHhc---------CCCCEEEEcCCCCCChH-----H----HHHHcCCEEEE-ecCCCCCCCCC
Q 014172 156 DQILVSNGAKQSILQAVLAVC---------SPGDEVIIPAPFWVSYP-----E----MARIADATPVI-LPTRISENFLL 216 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~---------~~gd~Vlv~~p~y~~~~-----~----~~~~~g~~~~~-v~~~~~~~~~~ 216 (429)
+-|++++|+.......+.-++ ++||.|++..+.++++. . .....|+++.. +.+. + ..
T Consensus 287 ~~vii~tg~~g~~~~~l~~~~~~~~~~i~l~~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~h~S--g--Ha 362 (422)
T TIGR00649 287 NYLIITTGSQGEPYAALTRIANNEHEQIRIRKGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIKRIHVS--G--HA 362 (422)
T ss_pred cEEEEEeCCCCcHHHHHHHHhCCCCCcEEeCCCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEeceEec--C--CC
Confidence 467777776544443444342 37899999988888766 1 23346777643 2321 1 14
Q ss_pred CHHHHHhhccc-CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhC
Q 014172 217 DPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 260 (429)
Q Consensus 217 d~e~l~~~l~~-~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~ 260 (429)
+-++|...++- +++-++-.+.- ...+.+.++++++.
T Consensus 363 ~~~dl~~~i~~~~Pk~~ipvHge--------~~~~~~~~~~a~~~ 399 (422)
T TIGR00649 363 SQEDHKLLLRLLKPKYIIPVHGE--------YRMLINHTKLAEEE 399 (422)
T ss_pred CHHHHHHHHHHhCCCEEEecCCc--------HHHHHHHHHHHHHc
Confidence 66666665542 56666633332 22366677777665
No 456
>PRK06139 short chain dehydrogenase; Provisional
Probab=45.46 E-value=1.6e+02 Score=28.51 Aligned_cols=97 Identities=12% Similarity=0.162 Sum_probs=49.4
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChH---HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc----
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLT---- 226 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~---- 226 (429)
....+++|.++...-..+...+.+.|.+|++..-.-.... ..++..|.++..++.|- -|.+++++.++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 80 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDV-----TDADQVKALATQAAS 80 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeC-----CCHHHHHHHHHHHHH
Confidence 3345666666555445556667788988776543222222 22334577776666543 25666665543
Q ss_pred --cCCcEEEEcCCCCCccC--CCCHHHHHHHHH
Q 014172 227 --EKSRLLILCSPSNPTGS--VYPKNLLDEIAR 255 (429)
Q Consensus 227 --~~~~~i~l~~p~NPtG~--~~~~~~l~~I~~ 255 (429)
.+...++.+......|. ..+.++++++.+
T Consensus 81 ~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~ 113 (330)
T PRK06139 81 FGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQ 113 (330)
T ss_pred hcCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 23455544333222222 234455555544
No 457
>PLN00011 cysteine synthase
Probab=45.22 E-value=2.6e+02 Score=26.89 Aligned_cols=53 Identities=9% Similarity=0.112 Sum_probs=36.9
Q ss_pred CcEEEecChHHHHHHHHHHhc-CCCCEEEEcCCCCCChHHHHHHcCCEEEEecC
Q 014172 156 DQILVSNGAKQSILQAVLAVC-SPGDEVIIPAPFWVSYPEMARIADATPVILPT 208 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~ 208 (429)
+.|+..+++..++.++..+-. .---.|+++...-..-...++.+|++++.++-
T Consensus 70 ~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 123 (323)
T PLN00011 70 STLIEATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQ 123 (323)
T ss_pred cEEEEeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECC
Confidence 457777788888876665542 22245666666545667789999999998873
No 458
>PRK08246 threonine dehydratase; Provisional
Probab=44.78 E-value=2.6e+02 Score=26.79 Aligned_cols=73 Identities=16% Similarity=0.184 Sum_probs=48.1
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCEEEEcCCCCCChHHHHHHcCCEEEEecC
Q 014172 132 AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPT 208 (429)
Q Consensus 132 ~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~ 208 (429)
.|.-..|-++........ ....|+..+++..++..+..+- ++-.-.|+++...-..-...++.+|++++.++-
T Consensus 49 tGS~K~R~a~~~~~~~~~----~~~~vv~aSsGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~ 122 (310)
T PRK08246 49 TGSFKARGAFNRLLAAPV----PAAGVVAASGGNAGLAVAYAAAALGVPATVFVPETAPPAKVARLRALGAEVVVVGA 122 (310)
T ss_pred CCCCHHHHHHHHHHhhcc----cCCeEEEeCCCHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEeCC
Confidence 566677776665443221 3456888888888888766654 233356667665444556788999999988863
No 459
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=44.71 E-value=69 Score=31.11 Aligned_cols=75 Identities=16% Similarity=0.229 Sum_probs=51.3
Q ss_pred CCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE
Q 014172 187 PFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (429)
Q Consensus 187 p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi 266 (429)
-.|.+|.+.++...+.+++++..... -.|-+.-++. +-|.|++.-| ..++.++.++|++.|+++ ++.++
T Consensus 59 k~y~syEeLakd~~vDvVyi~~~~~q----H~evv~l~l~-~~K~VL~EKP-----la~n~~e~~~iveaA~~r-gv~~m 127 (351)
T KOG2741|consen 59 KAYGSYEELAKDPEVDVVYISTPNPQ----HYEVVMLALN-KGKHVLCEKP-----LAMNVAEAEEIVEAAEAR-GVFFM 127 (351)
T ss_pred ccccCHHHHhcCCCcCEEEeCCCCcc----HHHHHHHHHH-cCCcEEeccc-----ccCCHHHHHHHHHHHHHc-CcEEE
Confidence 36889999999998999999864211 2333333333 3455665555 356788999999999999 85555
Q ss_pred EccCCcc
Q 014172 267 SDEIYEH 273 (429)
Q Consensus 267 ~Deay~~ 273 (429)
|..|.-
T Consensus 128 -eg~~~R 133 (351)
T KOG2741|consen 128 -EGLWWR 133 (351)
T ss_pred -eeeeee
Confidence 666543
No 460
>PRK04296 thymidine kinase; Provisional
Probab=44.68 E-value=84 Score=27.63 Aligned_cols=91 Identities=11% Similarity=0.103 Sum_probs=50.4
Q ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCCCC---hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc---cCCcEEEEcCC
Q 014172 164 AKQSILQAVLAVCSPGDEVIIPAPFWVS---YPEMARIADATPVILPTRISENFLLDPKVLESKLT---EKSRLLILCSP 237 (429)
Q Consensus 164 ~~~al~~~l~~l~~~gd~Vlv~~p~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~---~~~~~i~l~~p 237 (429)
++.++..+.+ +...|..|++..|.+.. ....+...|..+..+.. ...+++.+.+. .+..+|+|-..
T Consensus 16 TT~~l~~~~~-~~~~g~~v~i~k~~~d~~~~~~~i~~~lg~~~~~~~~-------~~~~~~~~~~~~~~~~~dvviIDEa 87 (190)
T PRK04296 16 STELLQRAYN-YEERGMKVLVFKPAIDDRYGEGKVVSRIGLSREAIPV-------SSDTDIFELIEEEGEKIDCVLIDEA 87 (190)
T ss_pred HHHHHHHHHH-HHHcCCeEEEEeccccccccCCcEecCCCCcccceEe-------CChHHHHHHHHhhCCCCCEEEEEcc
Confidence 3455554443 44568888877664332 23344445543322211 12333333332 25677888666
Q ss_pred CCCccCCCCHHHHHHHHHHHHhCCCeEEEEc
Q 014172 238 SNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 268 (429)
Q Consensus 238 ~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~D 268 (429)
+ .++.+++.++.+.++.. ++.||.=
T Consensus 88 q-----~l~~~~v~~l~~~l~~~-g~~vi~t 112 (190)
T PRK04296 88 Q-----FLDKEQVVQLAEVLDDL-GIPVICY 112 (190)
T ss_pred c-----cCCHHHHHHHHHHHHHc-CCeEEEE
Confidence 4 35677788888888877 7777754
No 461
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=44.54 E-value=97 Score=25.88 Aligned_cols=95 Identities=16% Similarity=0.196 Sum_probs=52.4
Q ss_pred cEEEecChHHHHHHHHHHhcCCCC-EEEEcCCC--CCChH---HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc---
Q 014172 157 QILVSNGAKQSILQAVLAVCSPGD-EVIIPAPF--WVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (429)
Q Consensus 157 ~i~~t~G~~~al~~~l~~l~~~gd-~Vlv~~p~--y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--- 227 (429)
.+++|.|++..-..+.+.+++.|+ .|++.... ..... ..++..+.++..++.+. -+.+.+++.++.
T Consensus 2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 76 (167)
T PF00106_consen 2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDL-----SDPESIRALIEEVIK 76 (167)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESET-----TSHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccc-----ccccccccccccccc
Confidence 367777766655666777777765 44444433 22222 22344678888888653 266777666542
Q ss_pred ---CCcEEEEcCCCCCccCCC--CHHHHHHHHHH
Q 014172 228 ---KSRLLILCSPSNPTGSVY--PKNLLDEIARI 256 (429)
Q Consensus 228 ---~~~~i~l~~p~NPtG~~~--~~~~l~~I~~~ 256 (429)
....++.+....+.+... +.+++++..++
T Consensus 77 ~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~ 110 (167)
T PF00106_consen 77 RFGPLDILINNAGIFSDGSLDDLSEEELERVFRV 110 (167)
T ss_dssp HHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccchhhhhcccc
Confidence 445555554444433332 34556555554
No 462
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=44.49 E-value=1.4e+02 Score=22.86 Aligned_cols=70 Identities=14% Similarity=0.080 Sum_probs=45.4
Q ss_pred CCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEE
Q 014172 188 FWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 267 (429)
Q Consensus 188 ~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~ 267 (429)
....|...++..|++.+.. ..++++.-....++..+. ++.+|++. |+. .+.+-...+.+.|+++ ++.++.
T Consensus 11 ~~~~~~~~~~~~G~~~~~h--g~~~~~~~~~~~l~~~i~-~aD~VIv~-----t~~-vsH~~~~~vk~~akk~-~ip~~~ 80 (97)
T PF10087_consen 11 RERRYKRILEKYGGKLIHH--GRDGGDEKKASRLPSKIK-KADLVIVF-----TDY-VSHNAMWKVKKAAKKY-GIPIIY 80 (97)
T ss_pred cHHHHHHHHHHcCCEEEEE--ecCCCCccchhHHHHhcC-CCCEEEEE-----eCC-cChHHHHHHHHHHHHc-CCcEEE
Confidence 3456788899999999888 222333333445776665 45666541 221 2455588899999999 888773
No 463
>PRK08278 short chain dehydrogenase; Provisional
Probab=44.19 E-value=2.4e+02 Score=26.00 Aligned_cols=76 Identities=12% Similarity=0.163 Sum_probs=42.7
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCC-------h---HHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhc
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS-------Y---PEMARIADATPVILPTRISENFLLDPKVLESKL 225 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~-------~---~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l 225 (429)
..+++|.|+...-..+...+.+.|.+|++....... . ...++..|.++..+..+. -+.+.+++.+
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~-----~~~~~i~~~~ 81 (273)
T PRK08278 7 KTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDV-----RDEDQVAAAV 81 (273)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecC-----CCHHHHHHHH
Confidence 467777766655555667778889887765543321 1 112233466666665542 2566666555
Q ss_pred cc------CCcEEEEcC
Q 014172 226 TE------KSRLLILCS 236 (429)
Q Consensus 226 ~~------~~~~i~l~~ 236 (429)
.. +...++.+.
T Consensus 82 ~~~~~~~g~id~li~~a 98 (273)
T PRK08278 82 AKAVERFGGIDICVNNA 98 (273)
T ss_pred HHHHHHhCCCCEEEECC
Confidence 42 456665443
No 464
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=44.05 E-value=71 Score=31.14 Aligned_cols=71 Identities=13% Similarity=0.209 Sum_probs=47.6
Q ss_pred CCCCEEEEcCCCCC-ChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEE-cCCCCCccCCCCHHHHHHHH
Q 014172 177 SPGDEVIIPAPFWV-SYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLIL-CSPSNPTGSVYPKNLLDEIA 254 (429)
Q Consensus 177 ~~gd~Vlv~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l-~~p~NPtG~~~~~~~l~~I~ 254 (429)
+++.+|++-+...- +....+...|+++..||.+ .+++++.+. ++..|+| +.|.+|.-... .++.|.
T Consensus 177 ~~~~~Vv~iD~GvK~nIlr~L~~rg~~vtVVP~~------t~~eeIl~~---~pDGiflSNGPGDP~~~~~---~i~~ik 244 (368)
T COG0505 177 EPGKHVVVIDFGVKRNILRELVKRGCRVTVVPAD------TSAEEILAL---NPDGIFLSNGPGDPAPLDY---AIETIK 244 (368)
T ss_pred CCCcEEEEEEcCccHHHHHHHHHCCCeEEEEcCC------CCHHHHHhh---CCCEEEEeCCCCChhHHHH---HHHHHH
Confidence 44567888776554 5666777889999999974 377777654 6788888 66788842222 255555
Q ss_pred HHHHh
Q 014172 255 RIVAK 259 (429)
Q Consensus 255 ~~a~~ 259 (429)
++..+
T Consensus 245 ~l~~~ 249 (368)
T COG0505 245 ELLGT 249 (368)
T ss_pred HHhcc
Confidence 55544
No 465
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=43.77 E-value=1.8e+02 Score=26.24 Aligned_cols=97 Identities=22% Similarity=0.195 Sum_probs=57.4
Q ss_pred EEecChHHHHHHHHHHhcCCCCEEE---EcCC----C--CC-----ChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhh
Q 014172 159 LVSNGAKQSILQAVLAVCSPGDEVI---IPAP----F--WV-----SYPEMARIADATPVILPTRISENFLLDPKVLESK 224 (429)
Q Consensus 159 ~~t~G~~~al~~~l~~l~~~gd~Vl---v~~p----~--y~-----~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~ 224 (429)
+..+||..+..++..+. +.|..|. +..+ . +. .....++..|+....++++.... ...+.+.++
T Consensus 2 vl~SGGkDS~~al~~a~-~~G~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~lgip~~~i~~~~~~~--~~~~~l~~~ 78 (218)
T TIGR03679 2 ALYSGGKDSNYALYKAL-EEGHEVRCLITVVPENEESYMFHTPNIELTRLQAEALGIPLVKIETSGEKE--KEVEDLKGA 78 (218)
T ss_pred eeecCcHHHHHHHHHHH-HcCCEEEEEEEeccCCCCccccCCCCHHHHHHHHHHhCCCEEEEECCCCCh--HHHHHHHHH
Confidence 55677777777555444 4675542 2211 1 11 12356677899888887642111 123334444
Q ss_pred cc----cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE
Q 014172 225 LT----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (429)
Q Consensus 225 l~----~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi 266 (429)
+. .....|+ +|.+.+......+-++|.+. ++.++
T Consensus 79 l~~~~~~g~~~vv-------~G~i~sd~~~~~~e~v~~~~-gl~~~ 116 (218)
T TIGR03679 79 LKELKREGVEGIV-------TGAIASRYQKSRIERICEEL-GLKVF 116 (218)
T ss_pred HHHHHHcCCCEEE-------ECCcccHhHHHHHHHHHHhC-CCeEE
Confidence 32 2566666 68888877788888999887 77665
No 466
>PRK05717 oxidoreductase; Validated
Probab=43.40 E-value=2.3e+02 Score=25.70 Aligned_cols=56 Identities=13% Similarity=0.052 Sum_probs=32.1
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCC
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR 209 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~ 209 (429)
....+++|.|+...-..+...+.+.|.+|++....-.......+..+.++..+..+
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D 64 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMD 64 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEcc
Confidence 33457777766555555677777888887776543222333334445555555553
No 467
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=43.31 E-value=99 Score=31.44 Aligned_cols=57 Identities=18% Similarity=0.152 Sum_probs=37.8
Q ss_pred CHHHHHhhcccCCcEEEEcC-CCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccc
Q 014172 217 DPKVLESKLTEKSRLLILCS-PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII 275 (429)
Q Consensus 217 d~e~l~~~l~~~~~~i~l~~-p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~ 275 (429)
-++.++++...+++.+++.+ .--.+|.- ..+.-+++.++|+++ ++.|+--.+.+.+.
T Consensus 77 ~~~~l~e~~~~gv~~~vi~s~gf~e~g~~-g~~~~~~l~~~a~~~-girvlGPnc~G~~~ 134 (447)
T TIGR02717 77 VPQVVEECGEKGVKGAVVITAGFKEVGEE-GAELEQELVEIARKY-GMRLLGPNCLGIIN 134 (447)
T ss_pred HHHHHHHHHhcCCCEEEEECCCccccCcc-hHHHHHHHHHHHHHc-CCEEEecCeeeEec
Confidence 56777777777888776543 33334421 122237899999999 99999877766443
No 468
>PRK13028 tryptophan synthase subunit beta; Provisional
Probab=43.28 E-value=3.3e+02 Score=27.27 Aligned_cols=73 Identities=11% Similarity=0.126 Sum_probs=44.7
Q ss_pred CCCHHHHHHHHHHHHh-hcCCCCCCCcEEE-ecChHHHHHHHHHHh-cCCCCEEEEcCCCCC---ChHHHHHHcCCEEEE
Q 014172 132 AGTLELRSAICHKLKE-ENGLSYTPDQILV-SNGAKQSILQAVLAV-CSPGDEVIIPAPFWV---SYPEMARIADATPVI 205 (429)
Q Consensus 132 ~G~~~lr~~ia~~l~~-~~g~~~~~~~i~~-t~G~~~al~~~l~~l-~~~gd~Vlv~~p~y~---~~~~~~~~~g~~~~~ 205 (429)
.|....|.++...+.. ..| ...+++ ++++..++..+..+- +.-.-.|+++...-. .-...++.+|++++.
T Consensus 90 tGS~K~r~al~~~l~A~~~G----~~~vI~etgsGnhG~A~A~aaa~~Gl~~~I~m~~~d~~~q~~nv~~mr~~GAeVi~ 165 (402)
T PRK13028 90 TGAHKINNCLGQALLAKRMG----KKRLIAETGAGQHGVATATAAALFGLECEIYMGEVDIERQHPNVFRMKLLGAEVVP 165 (402)
T ss_pred CcchHHHHHHHHHHHHHHcC----CCeEEEecCcHHHHHHHHHHHHHcCCCEEEEECCCcchhhHHHHHHHHHcCCEEEE
Confidence 5778888877766533 233 356776 455777776655443 233345666653211 223478999999999
Q ss_pred ecC
Q 014172 206 LPT 208 (429)
Q Consensus 206 v~~ 208 (429)
++.
T Consensus 166 v~~ 168 (402)
T PRK13028 166 VTR 168 (402)
T ss_pred EcC
Confidence 973
No 469
>PRK06500 short chain dehydrogenase; Provisional
Probab=43.02 E-value=2.5e+02 Score=25.18 Aligned_cols=54 Identities=13% Similarity=0.128 Sum_probs=31.7
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCC
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR 209 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~ 209 (429)
..+++|.++...-..+...+.+.|..|++..-.-.......+..|.++..+..+
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D 60 (249)
T PRK06500 7 KTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRAD 60 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEec
Confidence 456777666655556677778888777665433222233344456666666554
No 470
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=42.93 E-value=1e+02 Score=27.81 Aligned_cols=99 Identities=9% Similarity=0.077 Sum_probs=58.5
Q ss_pred HHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEE
Q 014172 218 PKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTV 297 (429)
Q Consensus 218 ~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~ 297 (429)
++.+++++....+++-+=.-+..+-.. .+..+++.++|++| ++.+|+++-+..-.--+.... .+.. ..+-+
T Consensus 24 ~~~ve~al~~Gv~~vQlR~K~~~~~~~--~~~a~~~~~lc~~~-~v~liINd~~dlA~~~~AdGV---HlGq---~D~~~ 94 (211)
T COG0352 24 LEWVEAALKGGVTAVQLREKDLSDEEY--LALAEKLRALCQKY-GVPLIINDRVDLALAVGADGV---HLGQ---DDMPL 94 (211)
T ss_pred HHHHHHHHhCCCeEEEEecCCCChHHH--HHHHHHHHHHHHHh-CCeEEecCcHHHHHhCCCCEE---EcCC---cccch
Confidence 788888888887777664444433222 55678999999999 898888876542110010000 0110 01223
Q ss_pred eccChhcccccceeeEEEcCHHHHHHHHH
Q 014172 298 NGFSKAFAMTGWRLGYIAGPKHFVAACNK 326 (429)
Q Consensus 298 ~S~SK~~~~~G~R~G~v~~~~~~~~~l~~ 326 (429)
.-..|.++ ++..+|+=+-+.+-.....+
T Consensus 95 ~~ar~~~~-~~~iIG~S~h~~eea~~A~~ 122 (211)
T COG0352 95 AEARELLG-PGLIIGLSTHDLEEALEAEE 122 (211)
T ss_pred HHHHHhcC-CCCEEEeecCCHHHHHHHHh
Confidence 33457777 88888887766555544443
No 471
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=42.76 E-value=2.2e+02 Score=25.58 Aligned_cols=80 Identities=9% Similarity=0.078 Sum_probs=42.5
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHc--CCEEEEecCCCCCCCCCCHHHHHhhccc----
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA--DATPVILPTRISENFLLDPKVLESKLTE---- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~--g~~~~~v~~~~~~~~~~d~e~l~~~l~~---- 227 (429)
....+++|.|+...-..+...+++.|..|++..-.-.......... +.++..+..+. .|.+.+.+.+..
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 78 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADV-----SDEADVEAAVAAALER 78 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 3446777766555455566777788877665543322222222222 34555555432 366666655432
Q ss_pred --CCcEEEEcCCC
Q 014172 228 --KSRLLILCSPS 238 (429)
Q Consensus 228 --~~~~i~l~~p~ 238 (429)
+...|+.+...
T Consensus 79 ~~~~d~vi~~ag~ 91 (251)
T PRK07231 79 FGSVDILVNNAGT 91 (251)
T ss_pred hCCCCEEEECCCC
Confidence 45666654443
No 472
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=42.66 E-value=2.1e+02 Score=25.98 Aligned_cols=76 Identities=9% Similarity=0.004 Sum_probs=43.1
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc------cCC
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT------EKS 229 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~------~~~ 229 (429)
..+++|.|+...-..+...|.+.|.+|++....-..........+.++..+..+. -|.+.+++.+. .+.
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~i 81 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDV-----TRQDSIDRIVAAAVERFGGI 81 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccC-----CCHHHHHHHHHHHHHHcCCC
Confidence 4577777666655666777788898887766544333333434444555555432 25555555443 245
Q ss_pred cEEEEcC
Q 014172 230 RLLILCS 236 (429)
Q Consensus 230 ~~i~l~~ 236 (429)
..++.+.
T Consensus 82 d~li~~a 88 (257)
T PRK07067 82 DILFNNA 88 (257)
T ss_pred CEEEECC
Confidence 6665443
No 473
>PRK08589 short chain dehydrogenase; Validated
Probab=42.58 E-value=2.3e+02 Score=26.17 Aligned_cols=54 Identities=7% Similarity=0.042 Sum_probs=31.5
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHH---HHcCCEEEEecCC
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA---RIADATPVILPTR 209 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~---~~~g~~~~~v~~~ 209 (429)
...++||.|+...-..+...|.+.|..|++.... ....... +..+.++..+..+
T Consensus 6 ~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~D 62 (272)
T PRK08589 6 NKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVD 62 (272)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEee
Confidence 3456777666655555677788889888776544 3322222 2235556555554
No 474
>PRK05884 short chain dehydrogenase; Provisional
Probab=42.03 E-value=1.2e+02 Score=27.06 Aligned_cols=69 Identities=16% Similarity=0.182 Sum_probs=35.6
Q ss_pred EEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc---cCCcEEE
Q 014172 158 ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT---EKSRLLI 233 (429)
Q Consensus 158 i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~---~~~~~i~ 233 (429)
+++|.|+...-..+...+.+.|..|++....-.......+..+...+..++. |.+.+++.++ .+...++
T Consensus 3 vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~-------~~~~v~~~~~~~~~~id~lv 74 (223)
T PRK05884 3 VLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNT-------DPASLEEARGLFPHHLDTIV 74 (223)
T ss_pred EEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCC-------CHHHHHHHHHHHhhcCcEEE
Confidence 6777665555555667777888777665433222222333334444444332 4555555443 2344444
No 475
>PRK06841 short chain dehydrogenase; Provisional
Probab=41.84 E-value=2.5e+02 Score=25.36 Aligned_cols=78 Identities=13% Similarity=0.082 Sum_probs=39.8
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc------c
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT------E 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~------~ 227 (429)
....+++|.++...-..+...+++.|..|++...............+.++..++.+. -+.+.+++.+. .
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDV-----SDSQSVEAAVAAVISAFG 88 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecC-----CCHHHHHHHHHHHHHHhC
Confidence 345677776655544556666778888777655432221112222333444555432 25555555443 1
Q ss_pred CCcEEEEcC
Q 014172 228 KSRLLILCS 236 (429)
Q Consensus 228 ~~~~i~l~~ 236 (429)
+...++.+.
T Consensus 89 ~~d~vi~~a 97 (255)
T PRK06841 89 RIDILVNSA 97 (255)
T ss_pred CCCEEEECC
Confidence 455665444
No 476
>PRK07791 short chain dehydrogenase; Provisional
Probab=41.43 E-value=2.7e+02 Score=25.99 Aligned_cols=32 Identities=16% Similarity=0.210 Sum_probs=21.7
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcC
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPA 186 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~ 186 (429)
...++||.|+...-..+...+.+.|..|++..
T Consensus 6 ~k~~lITGas~GIG~aia~~la~~G~~vii~~ 37 (286)
T PRK07791 6 GRVVIVTGAGGGIGRAHALAFAAEGARVVVND 37 (286)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEee
Confidence 34567777766655566677788888777654
No 477
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=41.26 E-value=2.5e+02 Score=25.36 Aligned_cols=68 Identities=15% Similarity=0.128 Sum_probs=38.7
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChH---HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
....+++|.|+...-..+...+++.|-+|++..-.-.... ..++..|.++..+..+. -|.+.+++.+.
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~-----~~~~~~~~~~~ 79 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDV-----TDHDAVRAAID 79 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccC-----CCHHHHHHHHH
Confidence 3456777777655555566777888988776543322221 22333466676666543 25566655543
No 478
>PRK08638 threonine dehydratase; Validated
Probab=41.22 E-value=1.3e+02 Score=29.29 Aligned_cols=52 Identities=12% Similarity=0.005 Sum_probs=35.5
Q ss_pred CcEEEecChHHHHHHHHHHhc-CCCCEEEEcCCCCCChHHHHHHcCCEEEEec
Q 014172 156 DQILVSNGAKQSILQAVLAVC-SPGDEVIIPAPFWVSYPEMARIADATPVILP 207 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~ 207 (429)
..|+.++++..++.+++.+-. .-.-.|++++..-..-...++.+|++++.++
T Consensus 76 ~~vv~~SsGN~g~alA~~aa~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~ 128 (333)
T PRK08638 76 KGVVACSAGNHAQGVALSCALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHG 128 (333)
T ss_pred CeEEEeCCcHHHHHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEEEC
Confidence 357777888888877666542 2224566665554455678899999999875
No 479
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=41.17 E-value=1.7e+02 Score=25.88 Aligned_cols=98 Identities=16% Similarity=0.153 Sum_probs=60.3
Q ss_pred EEEecChHHHHHHHHHHhcCCCCEEE---EcCCC-CC----------ChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHh
Q 014172 158 ILVSNGAKQSILQAVLAVCSPGDEVI---IPAPF-WV----------SYPEMARIADATPVILPTRISENFLLDPKVLES 223 (429)
Q Consensus 158 i~~t~G~~~al~~~l~~l~~~gd~Vl---v~~p~-y~----------~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~ 223 (429)
++.-+||..+..++..+. +.|..|. +..|. +. .....++..|+..+.++++.+.. --.+.+.+
T Consensus 3 ~v~~SGGkDS~~al~~a~-~~G~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgipl~~i~~~~~~e--~~~~~l~~ 79 (194)
T cd01994 3 VALISGGKDSCYALYRAL-EEGHEVVALLNLTPEEGSSMMYHTVNHELLELQAEAMGIPLIRIEISGEEE--DEVEDLKE 79 (194)
T ss_pred EEEecCCHHHHHHHHHHH-HcCCEEEEEEEEecCCCCcccccccCHHHHHHHHHHcCCcEEEEeCCCCch--HHHHHHHH
Confidence 456688888888665554 3564422 22221 11 12356778899888887643211 01234434
Q ss_pred hccc----CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE
Q 014172 224 KLTE----KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (429)
Q Consensus 224 ~l~~----~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi 266 (429)
.+.+ ....|+ +|...+..+...+-++|.+- |+..+
T Consensus 80 ~l~~~~~~g~~~vv-------~G~i~sd~~~~~~e~~~~~~-gl~~~ 118 (194)
T cd01994 80 LLRKLKEEGVDAVV-------FGAILSEYQRTRVERVCERL-GLEPL 118 (194)
T ss_pred HHHHHHHcCCCEEE-------ECccccHHHHHHHHHHHHHc-CCEEE
Confidence 3432 355665 79999999999999999998 88766
No 480
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=41.03 E-value=2.6e+02 Score=25.59 Aligned_cols=97 Identities=6% Similarity=-0.053 Sum_probs=50.2
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCCCCHHHHHhhccc---
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--- 227 (429)
....+++|.|+...-..+...|.+.|..|++..-.-...... .+..|.++..++.+. -|.+.+++.+..
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~ 83 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDV-----TDEDGVQAMVSQIEK 83 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 344577777666555556666778887776654332222222 223366676676643 256666655532
Q ss_pred ---CCcEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 228 ---KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 228 ---~~~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
+...++.+......+ ...+.++++++.+
T Consensus 84 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~ 116 (265)
T PRK07097 84 EVGVIDILVNNAGIIKRIPMLEMSAEDFRQVID 116 (265)
T ss_pred hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 355665544322111 1334455554443
No 481
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=40.95 E-value=2.2e+02 Score=27.74 Aligned_cols=47 Identities=23% Similarity=0.227 Sum_probs=31.2
Q ss_pred cChHHHHHHHHHHhcCCCCEEEEcCCCCCChH--HHHHHcCCEEEEecCC
Q 014172 162 NGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP--EMARIADATPVILPTR 209 (429)
Q Consensus 162 ~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~--~~~~~~g~~~~~v~~~ 209 (429)
+++..++.+++.+-+ .|-.+++.-|..-+-. ..++.+|++++..|..
T Consensus 111 TSGNtGigLA~~~a~-~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~tp~a 159 (362)
T KOG1252|consen 111 TSGNTGIGLAYMAAL-RGYKCIITMPEKMSKEKRILLRALGAEIILTPPA 159 (362)
T ss_pred CCCchHHHHHHHHHH-cCceEEEEechhhhHHHHHHHHHcCCEEEecChH
Confidence 344455666655544 6766776666665544 5678899999998864
No 482
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=40.36 E-value=1.5e+02 Score=27.59 Aligned_cols=93 Identities=17% Similarity=0.151 Sum_probs=0.0
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCC-CHHHHHhhccc-CCcEEE-
Q 014172 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLL-DPKVLESKLTE-KSRLLI- 233 (429)
Q Consensus 157 ~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-d~e~l~~~l~~-~~~~i~- 233 (429)
+|++-.|++++-. +...|.+.|. |+++.-+-.+........+...+.+.- + |.+.+++.+.+ +.++|+
T Consensus 2 ~ILvlgGTtE~r~-la~~L~~~g~-v~~sv~t~~g~~~~~~~~~~~~v~~G~-------lg~~~~l~~~l~~~~i~~vID 72 (249)
T PF02571_consen 2 KILVLGGTTEGRK-LAERLAEAGY-VIVSVATSYGGELLKPELPGLEVRVGR-------LGDEEGLAEFLRENGIDAVID 72 (249)
T ss_pred EEEEEechHHHHH-HHHHHHhcCC-EEEEEEhhhhHhhhccccCCceEEECC-------CCCHHHHHHHHHhCCCcEEEE
Q ss_pred EcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE
Q 014172 234 LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (429)
Q Consensus 234 l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi 266 (429)
-+|| +..+-=+.+.+.|++. |+..+
T Consensus 73 ATHP-------fA~~is~na~~a~~~~-~ipyl 97 (249)
T PF02571_consen 73 ATHP-------FAAEISQNAIEACREL-GIPYL 97 (249)
T ss_pred CCCc-------hHHHHHHHHHHHHhhc-CcceE
No 483
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=40.28 E-value=2.8e+02 Score=25.48 Aligned_cols=56 Identities=9% Similarity=0.033 Sum_probs=31.7
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH---HHHcCCEEEEecCC
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTR 209 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~ 209 (429)
....+++|.|+...-..+...|.+.|..|++....-...... ++..|.++..+..+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D 67 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKAD 67 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECC
Confidence 345667776665554566677778888877665432222222 22335666666654
No 484
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=39.86 E-value=3.3e+02 Score=25.72 Aligned_cols=97 Identities=11% Similarity=0.059 Sum_probs=50.0
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCC-hH---HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc--
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS-YP---EMARIADATPVILPTRISENFLLDPKVLESKLTE-- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~-~~---~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-- 227 (429)
+...+++|.|+...-..+...|++.|..|++....-.. .. ..++..|.+++.+..+- -|.+.+++.++.
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv-----~d~~~~~~~~~~~~ 85 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDI-----SQRATADELVATAV 85 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCC-----CCHHHHHHHHHHHH
Confidence 44566777666555555667778889888776532221 11 22334577777776643 255556554432
Q ss_pred ---CCcEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 228 ---KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 228 ---~~~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
+...++.+......+ ..++.+++++..+
T Consensus 86 ~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~ 118 (306)
T PRK07792 86 GLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIA 118 (306)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 344444332221111 1245566665544
No 485
>PRK07478 short chain dehydrogenase; Provisional
Probab=39.51 E-value=2.3e+02 Score=25.66 Aligned_cols=95 Identities=11% Similarity=0.057 Sum_probs=48.2
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-----
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE----- 227 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~----- 227 (429)
..+++|.|+...-..+...+.+.|.+|++..-.-...... ++..|.++..++.+- -|.+.+++.+..
T Consensus 7 k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 7 KVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDV-----RDEAYAKALVALAVERF 81 (254)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHhc
Confidence 4567776655544555677788888877654322222222 233455666666543 255555554431
Q ss_pred -CCcEEEEcCCCC-Ccc--CCCCHHHHHHHHH
Q 014172 228 -KSRLLILCSPSN-PTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 228 -~~~~i~l~~p~N-PtG--~~~~~~~l~~I~~ 255 (429)
+...++.+.... +.+ ...+.+++++..+
T Consensus 82 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~ 113 (254)
T PRK07478 82 GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLA 113 (254)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHH
Confidence 455555443321 222 2335555555543
No 486
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=39.48 E-value=2.9e+02 Score=27.32 Aligned_cols=107 Identities=18% Similarity=0.150 Sum_probs=57.7
Q ss_pred CCCHHHHHHHHHHHHh-hcCCCCCC--CcEEEecChHHHHHHHHHHhcCCC--CEEEEcCCCCCChHHHHHHcCCEEEEe
Q 014172 132 AGTLELRSAICHKLKE-ENGLSYTP--DQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVIL 206 (429)
Q Consensus 132 ~G~~~lr~~ia~~l~~-~~g~~~~~--~~i~~t~G~~~al~~~l~~l~~~g--d~Vlv~~p~y~~~~~~~~~~g~~~~~v 206 (429)
.|....|.+..-.... ..|. +.| ..|+..+++..++.++..+-. .| -.|+++.-.-..-...++.+|++++.+
T Consensus 86 tGS~KdR~A~~~l~~a~~~G~-i~pG~~~vV~aSsGN~G~alA~~a~~-~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~ 163 (368)
T PLN02556 86 TSSIKDRPALAMIEDAEKKNL-ITPGKTTLIEPTSGNMGISLAFMAAM-KGYKMILTMPSYTSLERRVTMRAFGAELVLT 163 (368)
T ss_pred ccchHHHHHHHHHHHHHHcCC-cCCCCCEEEEeCCchHHHHHHHHHHH-cCCCEEEEECCCCCHHHHHHHHHcCCEEEEE
Confidence 3555555554432221 1232 233 356777778888877666532 34 455555544444567889999999988
Q ss_pred cCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCcc
Q 014172 207 PTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTG 242 (429)
Q Consensus 207 ~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG 242 (429)
+... +..-..+..++...+++..++++..+||.+
T Consensus 164 ~~~~--~~~~~~~~a~~l~~~~~~~~~~~q~~np~~ 197 (368)
T PLN02556 164 DPTK--GMGGTVKKAYELLESTPDAFMLQQFSNPAN 197 (368)
T ss_pred CCCC--CccHHHHHHHHHHHhcCCCCccCCCCCHHH
Confidence 7321 111133444444444445555554456643
No 487
>PRK06128 oxidoreductase; Provisional
Probab=39.37 E-value=3e+02 Score=25.80 Aligned_cols=97 Identities=9% Similarity=0.092 Sum_probs=50.9
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCC--C---hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc--
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV--S---YPEMARIADATPVILPTRISENFLLDPKVLESKLTE-- 227 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~--~---~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-- 227 (429)
...++||.|+...-..+...|++.|..|++....-. . ....++..|.++..+..+- -|.+.+++++..
T Consensus 55 ~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~ 129 (300)
T PRK06128 55 GRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDL-----KDEAFCRQLVERAV 129 (300)
T ss_pred CCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCC-----CCHHHHHHHHHHHH
Confidence 346788877666556667778888988776432111 1 1223334566776666543 255666555432
Q ss_pred ----CCcEEEEcCCCC-Ccc--CCCCHHHHHHHHHH
Q 014172 228 ----KSRLLILCSPSN-PTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 ----~~~~i~l~~p~N-PtG--~~~~~~~l~~I~~~ 256 (429)
+...++.+.... +.+ ..++.+++++..++
T Consensus 130 ~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~ 165 (300)
T PRK06128 130 KELGGLDILVNIAGKQTAVKDIADITTEQFDATFKT 165 (300)
T ss_pred HHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHH
Confidence 455555433221 111 23355666655543
No 488
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=39.30 E-value=1.9e+02 Score=27.27 Aligned_cols=52 Identities=13% Similarity=0.138 Sum_probs=33.3
Q ss_pred CcEEEecChHHHHHHHHHHhcCCC--CEEEEcCCCCCChHHHHHHcCCEEEEecC
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVILPT 208 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~g--d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~ 208 (429)
..|+.++++..+..++..+- ..| -.|+++.-.-..-...++.+|++++.++.
T Consensus 66 ~~iv~~ssGN~g~alA~~a~-~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~ 119 (304)
T cd01562 66 KGVVAASAGNHAQGVAYAAK-LLGIPATIVMPETAPAAKVDATRAYGAEVVLYGE 119 (304)
T ss_pred CcEEEECCCHHHHHHHHHHH-HcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 45777777777777655543 234 34444443333355788899999999984
No 489
>PRK07825 short chain dehydrogenase; Provisional
Probab=39.04 E-value=2.4e+02 Score=25.95 Aligned_cols=31 Identities=23% Similarity=0.297 Sum_probs=19.7
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcC
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPA 186 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~ 186 (429)
..+++|.|+...-..+.+.+.+.|-.|++..
T Consensus 6 ~~ilVtGasggiG~~la~~l~~~G~~v~~~~ 36 (273)
T PRK07825 6 KVVAITGGARGIGLATARALAALGARVAIGD 36 (273)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEE
Confidence 4567776555444555666778887776654
No 490
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=38.96 E-value=2.8e+02 Score=25.21 Aligned_cols=76 Identities=14% Similarity=0.218 Sum_probs=41.6
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc----
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLT---- 226 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~---- 226 (429)
....+++|.|+...-..+.+.+.+.|..|++..-. ..... .....+.++..+..+.. |.+.+++.+.
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~i~~~~~~~~~ 87 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLT-----KPESAEKVVKEALE 87 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 34567777776665566677788889877665433 22222 22334555655655432 4555554443
Q ss_pred --cCCcEEEEc
Q 014172 227 --EKSRLLILC 235 (429)
Q Consensus 227 --~~~~~i~l~ 235 (429)
.+...++.+
T Consensus 88 ~~g~id~li~~ 98 (258)
T PRK06935 88 EFGKIDILVNN 98 (258)
T ss_pred HcCCCCEEEEC
Confidence 245555543
No 491
>PF04748 Polysacc_deac_2: Divergent polysaccharide deacetylase; InterPro: IPR006837 This is a family of uncharacterised proteins that includes YibQ.; PDB: 2QV5_A 2NLY_A.
Probab=38.90 E-value=2.4e+02 Score=25.46 Aligned_cols=119 Identities=11% Similarity=0.147 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCcEE--EecC---hHHHHHHHHHHhcCCCCEEEEcCC--CCCChHHHHHHcCCEEEEec
Q 014172 135 LELRSAICHKLKEENGLSYTPDQIL--VSNG---AKQSILQAVLAVCSPGDEVIIPAP--FWVSYPEMARIADATPVILP 207 (429)
Q Consensus 135 ~~lr~~ia~~l~~~~g~~~~~~~i~--~t~G---~~~al~~~l~~l~~~gd~Vlv~~p--~y~~~~~~~~~~g~~~~~v~ 207 (429)
.++++.+.+.+.+.-+ .--|- .++. ...++..++..+-+.| -..+.+- ........++..|......+
T Consensus 74 ~~i~~~l~~al~~vp~----a~GvnNhmGS~~T~~~~~m~~vl~~l~~~g-l~FvDS~T~~~s~a~~~A~~~gvp~~~rd 148 (213)
T PF04748_consen 74 EEIRKRLEAALARVPG----AVGVNNHMGSRFTSDREAMRWVLEVLKERG-LFFVDSRTTPRSVAPQVAKELGVPAARRD 148 (213)
T ss_dssp HHHHHHHHHHHCCSTT-----SEEEEEE-CCHHC-HHHHHHHHHHHHHTT--EEEE-S--TT-SHHHHHHHCT--EEE-S
T ss_pred HHHHHHHHHHHHHCCC----cEEEecCCCccccCCHHHHHHHHHHHHHcC-CEEEeCCCCcccHHHHHHHHcCCCEEeec
Confidence 5667777766653211 01111 2222 3445555555555554 3444332 23456678899999887777
Q ss_pred CCCCCCCCCCHHHHHhhcc-------cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE
Q 014172 208 TRISENFLLDPKVLESKLT-------EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (429)
Q Consensus 208 ~~~~~~~~~d~e~l~~~l~-------~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi 266 (429)
+.-++. .|.+.+++.+. .+-.+|.|.+|+.-| .+.+++...-.++. |+-++
T Consensus 149 vfLD~~--~~~~~I~~ql~~~~~~A~~~G~aI~Igh~~p~T-----l~~L~~~~~~l~~~-gi~lV 206 (213)
T PF04748_consen 149 VFLDND--QDEAAIRRQLDQAARIARKQGSAIAIGHPRPET-----LEALEEWLPELEAQ-GIELV 206 (213)
T ss_dssp EETTST---SHHHHHHHHHHHHHHHHCCSEEEEEEE-SCCH-----HHHHHHHHHHHHHC-TEEE-
T ss_pred eecCCC--CCHHHHHHHHHHHHHhhhhcCcEEEEEcCCHHH-----HHHHHHHHhHHhhC-CEEEE
Confidence 655443 68888887764 256688888887654 33444444444466 66655
No 492
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=38.64 E-value=2e+02 Score=22.77 Aligned_cols=93 Identities=11% Similarity=0.139 Sum_probs=48.8
Q ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc--CCcEEEEcCCC--C
Q 014172 164 AKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE--KSRLLILCSPS--N 239 (429)
Q Consensus 164 ~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--~~~~i~l~~p~--N 239 (429)
-.+.+..++..+.+-|=+|.... +....++..|.++..+.-..+++ +++ +.+.+.. +..+| |+.|. +
T Consensus 10 ~K~~~~~~a~~l~~~G~~i~AT~----gTa~~L~~~Gi~~~~v~~~~~~g---~~~-i~~~i~~~g~idlV-In~~~~~~ 80 (112)
T cd00532 10 VKAMLVDLAPKLSSDGFPLFATG----GTSRVLADAGIPVRAVSKRHEDG---EPT-VDAAIAEKGKFDVV-INLRDPRR 80 (112)
T ss_pred cHHHHHHHHHHHHHCCCEEEECc----HHHHHHHHcCCceEEEEecCCCC---CcH-HHHHHhCCCCEEEE-EEcCCCCc
Confidence 33444444555555565554333 33444555777776664332211 333 3444444 44444 44443 2
Q ss_pred CccCCCCHHHHHHHHHHHHhCCCeEEEEcc
Q 014172 240 PTGSVYPKNLLDEIARIVAKHPRLLVLSDE 269 (429)
Q Consensus 240 PtG~~~~~~~l~~I~~~a~~~~~i~vi~De 269 (429)
... ..++-..|.+.|.++ ++.++.+-
T Consensus 81 ~~~---~~~dg~~iRR~A~~~-~Ip~~T~~ 106 (112)
T cd00532 81 DRC---TDEDGTALLRLARLY-KIPVTTPN 106 (112)
T ss_pred ccc---cCCChHHHHHHHHHc-CCCEEECH
Confidence 211 133367889999999 99998763
No 493
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=38.51 E-value=2.8e+02 Score=24.88 Aligned_cols=67 Identities=7% Similarity=0.043 Sum_probs=37.5
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCC-ChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhc
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV-SYPEMARIADATPVILPTRISENFLLDPKVLESKL 225 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l 225 (429)
....+++|.|+...-..+...+++.|..|++....-. ......+..+.++..++.+. -+.+.+++.+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~ 71 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADL-----SDIEAIKALV 71 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHH
Confidence 4456788877665555667778888977766543211 11222334455566666543 2455555443
No 494
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=38.21 E-value=2.3e+02 Score=25.09 Aligned_cols=104 Identities=14% Similarity=0.133 Sum_probs=53.0
Q ss_pred CCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEe------------cCCCCCCCCCC
Q 014172 150 GLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVIL------------PTRISENFLLD 217 (429)
Q Consensus 150 g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v------------~~~~~~~~~~d 217 (429)
+.++....|.+...+.-+.. +.+.|.+.|-+|++.+.............|++.+.. |.-. +..++
T Consensus 23 ~~~l~gk~v~I~G~G~vG~~-~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v~~~~l~~~~~Dv~vp~A~--~~~I~ 99 (200)
T cd01075 23 TDSLEGKTVAVQGLGKVGYK-LAEHLLEEGAKLIVADINEEAVARAAELFGATVVAPEEIYSVDADVFAPCAL--GGVIN 99 (200)
T ss_pred CCCCCCCEEEEECCCHHHHH-HHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEcchhhccccCCEEEeccc--ccccC
Confidence 43455556766665665555 456666788888887765433333334445443211 1110 12244
Q ss_pred HHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEc
Q 014172 218 PKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 268 (429)
Q Consensus 218 ~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~D 268 (429)
.+.+++. +.+ +++...|||+-. .+-.++.+++ |++++-|
T Consensus 100 ~~~~~~l---~~~-~v~~~AN~~~~~-------~~~~~~L~~~-Gi~~~Pd 138 (200)
T cd01075 100 DDTIPQL---KAK-AIAGAANNQLAD-------PRHGQMLHER-GILYAPD 138 (200)
T ss_pred HHHHHHc---CCC-EEEECCcCccCC-------HhHHHHHHHC-CCEEeCc
Confidence 4444332 233 345566777622 2344555677 7777733
No 495
>PRK12367 short chain dehydrogenase; Provisional
Probab=38.17 E-value=3.2e+02 Score=24.99 Aligned_cols=92 Identities=16% Similarity=0.113 Sum_probs=45.8
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEc
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC 235 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~ 235 (429)
..+++|.|+...-..+...+.+.|..|++....-..-..... .+. ...+..+. -|.+++++.+. +...++.+
T Consensus 15 k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~-~~~-~~~~~~D~-----~~~~~~~~~~~-~iDilVnn 86 (245)
T PRK12367 15 KRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND-ESP-NEWIKWEC-----GKEESLDKQLA-SLDVLILN 86 (245)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc-cCC-CeEEEeeC-----CCHHHHHHhcC-CCCEEEEC
Confidence 567777666655555677788889887754322101111111 111 12222221 15566666554 45565555
Q ss_pred CCCCCccCCCCHHHHHHHHHH
Q 014172 236 SPSNPTGSVYPKNLLDEIARI 256 (429)
Q Consensus 236 ~p~NPtG~~~~~~~l~~I~~~ 256 (429)
....+.+. .+.++++++.++
T Consensus 87 AG~~~~~~-~~~~~~~~~~~v 106 (245)
T PRK12367 87 HGINPGGR-QDPENINKALEI 106 (245)
T ss_pred CccCCcCC-CCHHHHHHHHHH
Confidence 44444433 466666665543
No 496
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=38.05 E-value=61 Score=32.95 Aligned_cols=73 Identities=16% Similarity=0.173 Sum_probs=44.9
Q ss_pred HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCC---------cEEE--E-cCC--CCCccCCCCHHHHHHHHHHHHh
Q 014172 194 EMARIADATPVILPTRISENFLLDPKVLESKLTEKS---------RLLI--L-CSP--SNPTGSVYPKNLLDEIARIVAK 259 (429)
Q Consensus 194 ~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~---------~~i~--l-~~p--~NPtG~~~~~~~l~~I~~~a~~ 259 (429)
..+...+.++....+..+.+|.+.+..+.++..... ..++ . ..+ ..+.|-.++++++++|++.|++
T Consensus 29 d~ma~~K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r~~~~~~~~~~~~~~~~~~~~~~~~~g~YT~~di~eiv~yA~~ 108 (445)
T cd06569 29 DQMAAYKLNKLHLHLTDDEGWRLEIPGLPELTEVGAKRCHDLSETTCLLPQLGSGPDTNNSGSGYYSRADYIEILKYAKA 108 (445)
T ss_pred HHHHHhCCceEEEEeecCCCcceeccCCchhhhcccccccccccccccccccccCcccCcccCCccCHHHHHHHHHHHHH
Confidence 445566777777777666667766655543321100 0010 0 111 1244678999999999999999
Q ss_pred CCCeEEEE
Q 014172 260 HPRLLVLS 267 (429)
Q Consensus 260 ~~~i~vi~ 267 (429)
+ +|-||-
T Consensus 109 r-gI~VIP 115 (445)
T cd06569 109 R-HIEVIP 115 (445)
T ss_pred c-CCEEEE
Confidence 9 888883
No 497
>PLN03013 cysteine synthase
Probab=38.03 E-value=3.5e+02 Score=27.42 Aligned_cols=77 Identities=14% Similarity=0.177 Sum_probs=46.4
Q ss_pred CCCCCHHHHHHHHHHHHh-hcCCCCCCC--cEEEecChHHHHHHHHHHhcCCC--CEEEEcCCCCCChHHHHHHcCCEEE
Q 014172 130 PNAGTLELRSAICHKLKE-ENGLSYTPD--QILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPV 204 (429)
Q Consensus 130 ~~~G~~~lr~~ia~~l~~-~~g~~~~~~--~i~~t~G~~~al~~~l~~l~~~g--d~Vlv~~p~y~~~~~~~~~~g~~~~ 204 (429)
.+.|.-..|-+..-.... ..|. +.+. .|+-.++|..++.+++.+-. .| -.|++++-.-..-...++.+|++++
T Consensus 148 NPtGSfKdR~A~~~l~~a~~~G~-l~pG~~~VVeaSSGN~G~ALA~~a~~-~G~~~~VvvP~~~s~~K~~~ira~GAeVi 225 (429)
T PLN03013 148 EPCCSVKDRIGYSMVTDAEQKGF-ISPGKSVLVEPTSGNTGIGLAFIAAS-RGYRLILTMPASMSMERRVLLKAFGAELV 225 (429)
T ss_pred CCccccHHHHHHHHHHHHHHcCC-cCCCCcEEEEECCcHHHHHHHHHHHH-cCCCEEEEECCCCcHHHHHHHHHcCCEEE
Confidence 334666666554433322 2232 2332 47777778888877666543 34 4555666554556688999999999
Q ss_pred EecC
Q 014172 205 ILPT 208 (429)
Q Consensus 205 ~v~~ 208 (429)
.++-
T Consensus 226 ~v~~ 229 (429)
T PLN03013 226 LTDP 229 (429)
T ss_pred EECC
Confidence 9864
No 498
>PRK07109 short chain dehydrogenase; Provisional
Probab=37.16 E-value=2.4e+02 Score=27.18 Aligned_cols=66 Identities=11% Similarity=0.127 Sum_probs=37.0
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChH---HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhc
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKL 225 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l 225 (429)
...++||.|+...-..+...+.+.|..|++..-.-.... ..++..|.++..+..+.. |.+.+++.+
T Consensus 8 ~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~-----d~~~v~~~~ 76 (334)
T PRK07109 8 RQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVA-----DAEAVQAAA 76 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCC-----CHHHHHHHH
Confidence 345677766555445556777788877766543221111 223345777777766432 566665554
No 499
>PRK06182 short chain dehydrogenase; Validated
Probab=37.13 E-value=2.8e+02 Score=25.51 Aligned_cols=79 Identities=14% Similarity=0.080 Sum_probs=40.0
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc------cCC
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT------EKS 229 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~------~~~ 229 (429)
..+++|.|+...-..+...+.+.|..|++..-.-... ..+...+..++..++. |.+.+++.+. .+.
T Consensus 4 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l-~~~~~~~~~~~~~Dv~-------~~~~~~~~~~~~~~~~~~i 75 (273)
T PRK06182 4 KVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKM-EDLASLGVHPLSLDVT-------DEASIKAAVDTIIAEEGRI 75 (273)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHhCCCeEEEeeCC-------CHHHHHHHHHHHHHhcCCC
Confidence 3567776655444555666778898877654321111 1122235555555442 5555555443 145
Q ss_pred cEEEEcCCCCCcc
Q 014172 230 RLLILCSPSNPTG 242 (429)
Q Consensus 230 ~~i~l~~p~NPtG 242 (429)
..++.+....+.|
T Consensus 76 d~li~~ag~~~~~ 88 (273)
T PRK06182 76 DVLVNNAGYGSYG 88 (273)
T ss_pred CEEEECCCcCCCC
Confidence 5555444333333
No 500
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=37.08 E-value=3.6e+02 Score=25.92 Aligned_cols=117 Identities=11% Similarity=0.094 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCC--CEEEEcC--CCCCChH--HHHHHcCCEEEEecC
Q 014172 135 LELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPG--DEVIIPA--PFWVSYP--EMARIADATPVILPT 208 (429)
Q Consensus 135 ~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~g--d~Vlv~~--p~y~~~~--~~~~~~g~~~~~v~~ 208 (429)
....+.|+++-.+. +...++++|.|.+.....++....+.| -+|++.+ |...+.. ..+...|..+..++-
T Consensus 104 ~~~~~~I~~~a~~~----i~~g~~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~EsrP~~~G~~~a~~L~~~GI~vtlI~D 179 (310)
T PRK08535 104 ENAVEKIGEIGAKR----IRDGDVIMTHCNSSAALSVIKTAHEQGKDIEVIATETRPRNQGHITAKELAEYGIPVTLIVD 179 (310)
T ss_pred HHHHHHHHHHHHHH----cCCCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEecCCchhhHHHHHHHHHHCCCCEEEEeh
Confidence 34555566554433 345678888886666655666655444 3455543 5544433 233456888877762
Q ss_pred CCCCCCCCCHHHHHhhcccCCcEEEE-cCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEE
Q 014172 209 RISENFLLDPKVLESKLTEKSRLLIL-CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 267 (429)
Q Consensus 209 ~~~~~~~~d~e~l~~~l~~~~~~i~l-~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~ 267 (429)
+ ..-.+ + ++...+++ ..---..|.++++----.++-.|+.| ++.+++
T Consensus 180 ---s----av~~~---m-~~vd~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~-~vPv~V 227 (310)
T PRK08535 180 ---S----AVRYF---M-KDVDKVVVGADAITANGAVINKIGTSQIALAAHEA-RVPFMV 227 (310)
T ss_pred ---h----HHHHH---H-HhCCEEEECccEEecCCCEEeHHhHHHHHHHHHHh-CCCEEE
Confidence 1 12222 2 23445544 33333456666666566778888888 777765
Done!