Query 014172
Match_columns 429
No_of_seqs 287 out of 2567
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 06:46:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014172.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014172hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1b5p_A Protein (aspartate amin 100.0 1.5E-51 5.1E-56 408.0 40.2 345 68-428 4-348 (385)
2 1j32_A Aspartate aminotransfer 100.0 1.5E-49 5.2E-54 393.5 36.3 347 68-428 3-350 (388)
3 2x5d_A Probable aminotransfera 100.0 3.7E-49 1.3E-53 394.2 35.6 350 66-428 8-359 (412)
4 3h14_A Aminotransferase, class 100.0 8.4E-49 2.9E-53 388.7 37.9 339 67-428 4-342 (391)
5 3b46_A Aminotransferase BNA3; 100.0 1.8E-49 6E-54 401.0 32.4 350 75-428 33-403 (447)
6 1gd9_A Aspartate aminotransfer 100.0 1.9E-48 6.5E-53 385.7 36.9 343 67-428 2-347 (389)
7 3fvs_A Kynurenine--oxoglutarat 100.0 2.7E-48 9.3E-53 388.8 35.4 355 66-428 4-378 (422)
8 3k7y_A Aspartate aminotransfer 100.0 4.1E-49 1.4E-53 392.4 28.5 339 68-428 4-375 (405)
9 1o4s_A Aspartate aminotransfer 100.0 9.9E-48 3.4E-52 381.1 37.1 340 67-428 13-352 (389)
10 1u08_A Hypothetical aminotrans 100.0 3.4E-47 1.2E-51 376.5 39.8 341 68-428 8-349 (386)
11 2o0r_A RV0858C (N-succinyldiam 100.0 2.1E-47 7E-52 381.5 37.9 343 67-428 2-346 (411)
12 3aow_A Putative uncharacterize 100.0 1.5E-47 5.2E-52 386.9 36.1 340 64-428 50-403 (448)
13 1xi9_A Putative transaminase; 100.0 9.4E-48 3.2E-52 383.3 33.4 345 66-428 10-364 (406)
14 3jtx_A Aminotransferase; NP_28 100.0 7.6E-48 2.6E-52 382.1 32.0 339 69-428 3-353 (396)
15 2o1b_A Aminotransferase, class 100.0 6.8E-48 2.3E-52 384.3 31.5 340 69-428 23-364 (404)
16 2dou_A Probable N-succinyldiam 100.0 2.2E-47 7.6E-52 376.5 34.6 334 74-428 3-339 (376)
17 3e2y_A Kynurenine-oxoglutarate 100.0 3.3E-47 1.1E-51 379.3 35.6 352 69-428 2-369 (410)
18 1yiz_A Kynurenine aminotransfe 100.0 7.1E-47 2.4E-51 379.6 37.7 355 66-428 13-385 (429)
19 3ele_A Amino transferase; RER0 100.0 9.4E-47 3.2E-51 374.7 34.8 336 66-428 2-359 (398)
20 3dyd_A Tyrosine aminotransfera 100.0 5.3E-47 1.8E-51 380.6 32.9 352 64-428 24-387 (427)
21 2z61_A Probable aspartate amin 100.0 4.1E-46 1.4E-50 366.6 37.2 330 68-428 2-332 (370)
22 4f4e_A Aromatic-amino-acid ami 100.0 2.7E-47 9.2E-52 381.8 27.4 345 66-429 22-393 (420)
23 2gb3_A Aspartate aminotransfer 100.0 3.1E-46 1E-50 372.8 34.7 338 68-428 16-360 (409)
24 2r2n_A Kynurenine/alpha-aminoa 100.0 1.6E-46 5.4E-51 376.9 32.7 343 63-428 2-381 (425)
25 3t18_A Aminotransferase class 100.0 1.1E-46 3.9E-51 376.2 31.1 344 66-428 6-380 (413)
26 3qgu_A LL-diaminopimelate amin 100.0 2E-46 6.9E-51 378.6 33.1 339 66-428 37-401 (449)
27 2zc0_A Alanine glyoxylate tran 100.0 2.2E-45 7.4E-50 366.0 36.9 348 62-428 1-362 (407)
28 3kax_A Aminotransferase, class 100.0 1.8E-45 6E-50 363.2 34.3 319 94-428 23-346 (383)
29 3ihj_A Alanine aminotransferas 100.0 1.8E-46 6.3E-51 383.6 28.0 355 68-428 28-453 (498)
30 3fdb_A Beta C-S lyase, putativ 100.0 5.4E-46 1.8E-50 366.3 30.2 315 92-428 20-337 (377)
31 3ezs_A Aminotransferase ASPB; 100.0 4.5E-46 1.5E-50 366.9 28.2 324 75-428 4-334 (376)
32 3g0t_A Putative aminotransfera 100.0 1.3E-45 4.3E-50 371.0 31.6 336 74-428 22-397 (437)
33 3nra_A Aspartate aminotransfer 100.0 1.3E-45 4.6E-50 367.1 31.1 319 96-428 40-366 (407)
34 3dzz_A Putative pyridoxal 5'-p 100.0 6.8E-45 2.3E-49 359.9 35.2 320 93-428 25-350 (391)
35 3rq1_A Aminotransferase class 100.0 1.7E-45 5.7E-50 368.4 30.9 341 69-428 10-382 (418)
36 4dq6_A Putative pyridoxal phos 100.0 8.5E-45 2.9E-49 359.2 35.2 318 94-428 31-354 (391)
37 1bw0_A TAT, protein (tyrosine 100.0 1.9E-45 6.5E-50 367.6 30.2 352 64-428 4-376 (416)
38 3tcm_A Alanine aminotransferas 100.0 4.5E-45 1.6E-49 373.7 33.7 359 68-428 28-454 (500)
39 3ei9_A LL-diaminopimelate amin 100.0 7.7E-45 2.6E-49 365.2 34.1 338 66-428 24-389 (432)
40 1c7n_A Cystalysin; transferase 100.0 7.4E-45 2.5E-49 361.1 33.6 318 95-428 31-354 (399)
41 7aat_A Aspartate aminotransfer 100.0 1.8E-45 6.1E-50 366.0 26.3 338 71-428 6-373 (401)
42 1d2f_A MALY protein; aminotran 100.0 2.9E-44 1E-48 355.9 33.7 315 96-428 29-350 (390)
43 1v2d_A Glutamine aminotransfer 100.0 3.1E-44 1E-48 354.7 33.5 327 67-428 2-330 (381)
44 1vp4_A Aminotransferase, putat 100.0 4.3E-45 1.5E-49 366.4 27.8 341 64-428 17-376 (425)
45 3l8a_A METC, putative aminotra 100.0 3.8E-44 1.3E-48 359.1 32.9 319 94-428 60-383 (421)
46 3asa_A LL-diaminopimelate amin 100.0 3.7E-44 1.3E-48 356.7 31.8 335 67-428 2-354 (400)
47 4eu1_A Mitochondrial aspartate 100.0 1.5E-45 5.3E-50 367.6 21.2 346 64-429 12-382 (409)
48 2x5f_A Aspartate_tyrosine_phen 100.0 7.9E-45 2.7E-49 364.8 25.8 314 95-428 47-395 (430)
49 3fsl_A Aromatic-amino-acid ami 100.0 1.9E-44 6.3E-49 357.9 27.0 341 70-429 3-371 (397)
50 3get_A Histidinol-phosphate am 100.0 2E-43 6.7E-48 346.7 29.0 327 67-428 3-332 (365)
51 1ajs_A Aspartate aminotransfer 100.0 7.5E-44 2.6E-48 355.5 26.4 343 68-429 5-382 (412)
52 3meb_A Aspartate aminotransfer 100.0 3.8E-44 1.3E-48 362.1 24.3 341 66-429 22-414 (448)
53 2zyj_A Alpha-aminodipate amino 100.0 4.9E-43 1.7E-47 348.1 29.9 331 67-428 9-351 (397)
54 1yaa_A Aspartate aminotransfer 100.0 1E-43 3.5E-48 354.7 24.9 344 67-429 3-382 (412)
55 2q7w_A Aspartate aminotransfer 100.0 1E-43 3.5E-48 352.4 23.0 341 70-429 3-370 (396)
56 1iay_A ACC synthase 2, 1-amino 100.0 9.8E-43 3.4E-47 349.4 30.2 323 96-428 37-387 (428)
57 4h51_A Aspartate aminotransfer 100.0 5.3E-43 1.8E-47 348.8 27.2 343 65-428 14-387 (420)
58 1fg7_A Histidinol phosphate am 100.0 9.1E-43 3.1E-47 341.5 27.1 289 96-428 30-321 (356)
59 3ly1_A Putative histidinol-pho 100.0 2.8E-42 9.7E-47 336.9 29.5 303 93-429 14-318 (354)
60 3ffh_A Histidinol-phosphate am 100.0 8.5E-42 2.9E-46 334.8 32.3 324 68-428 6-330 (363)
61 3d6k_A Putative aminotransfera 100.0 4.6E-43 1.6E-47 351.4 22.4 320 84-429 22-375 (422)
62 3piu_A 1-aminocyclopropane-1-c 100.0 3.7E-42 1.2E-46 346.1 28.1 323 96-428 39-392 (435)
63 3b1d_A Betac-S lyase; HET: PLP 100.0 1.5E-45 5.1E-50 365.7 0.0 317 96-428 32-354 (392)
64 3ftb_A Histidinol-phosphate am 100.0 7E-41 2.4E-45 327.8 32.8 298 93-428 24-323 (361)
65 3ppl_A Aspartate aminotransfer 100.0 1.3E-42 4.6E-47 348.4 20.8 309 95-428 33-376 (427)
66 3op7_A Aminotransferase class 100.0 1.4E-41 4.6E-46 334.9 27.6 289 115-428 46-334 (375)
67 2ay1_A Aroat, aromatic amino a 100.0 7.3E-42 2.5E-46 339.0 25.0 338 70-429 3-367 (394)
68 1lc5_A COBD, L-threonine-O-3-p 100.0 7.5E-41 2.6E-45 328.5 31.4 301 92-428 21-322 (364)
69 3g7q_A Valine-pyruvate aminotr 100.0 4.2E-41 1.4E-45 335.9 28.0 315 94-428 30-367 (417)
70 3if2_A Aminotransferase; YP_26 100.0 4.7E-41 1.6E-45 338.7 28.4 345 66-428 2-393 (444)
71 3ez1_A Aminotransferase MOCR f 100.0 3.5E-42 1.2E-46 344.8 19.5 328 71-428 6-371 (423)
72 3euc_A Histidinol-phosphate am 100.0 2.6E-40 8.9E-45 324.7 32.1 298 95-428 30-330 (367)
73 3cq5_A Histidinol-phosphate am 100.0 7.8E-40 2.7E-44 322.0 34.0 299 97-428 32-335 (369)
74 3f6t_A Aspartate aminotransfer 100.0 1.9E-41 6.6E-46 349.1 22.4 320 96-428 104-486 (533)
75 2zy4_A L-aspartate beta-decarb 100.0 5.2E-41 1.8E-45 346.2 24.3 345 70-428 72-483 (546)
76 3hdo_A Histidinol-phosphate am 100.0 2.6E-39 8.9E-44 317.0 31.9 312 67-428 5-319 (360)
77 3p1t_A Putative histidinol-pho 100.0 1E-38 3.5E-43 309.4 32.8 289 92-428 13-301 (337)
78 3fkd_A L-threonine-O-3-phospha 100.0 2.6E-39 9E-44 315.7 26.6 291 93-428 13-304 (350)
79 3bwn_A AT1G70560, L-tryptophan 100.0 3.5E-40 1.2E-44 327.3 19.6 295 93-428 20-349 (391)
80 1uu1_A Histidinol-phosphate am 100.0 2.6E-38 9E-43 306.9 26.2 287 96-428 20-307 (335)
81 2hox_A ALLIIN lyase 1; cystein 100.0 2.7E-39 9.2E-44 324.5 19.2 294 95-428 56-387 (427)
82 3a2b_A Serine palmitoyltransfe 100.0 2.6E-36 8.9E-41 299.6 27.0 299 93-428 41-350 (398)
83 1t3i_A Probable cysteine desul 100.0 8.6E-34 2.9E-38 282.7 24.7 296 95-428 27-366 (420)
84 1e5e_A MGL, methionine gamma-l 100.0 2.7E-33 9.1E-38 278.9 23.8 280 97-427 20-333 (404)
85 3tqx_A 2-amino-3-ketobutyrate 100.0 2.8E-33 9.6E-38 277.3 23.7 297 94-429 42-355 (399)
86 1kmj_A Selenocysteine lyase; p 100.0 6.7E-33 2.3E-37 274.8 26.5 296 94-428 21-358 (406)
87 1bs0_A Protein (8-amino-7-oxon 100.0 1.1E-32 3.6E-37 272.2 27.5 296 93-429 37-346 (384)
88 1vjo_A Alanine--glyoxylate ami 100.0 6.6E-33 2.3E-37 274.3 22.9 287 106-428 42-355 (393)
89 2dr1_A PH1308 protein, 386AA l 100.0 2.2E-32 7.4E-37 269.5 25.8 293 98-428 21-340 (386)
90 1elu_A L-cysteine/L-cystine C- 100.0 4.3E-33 1.5E-37 274.9 20.8 299 96-428 16-356 (390)
91 1eg5_A Aminotransferase; PLP-d 100.0 1.8E-32 6.2E-37 269.7 23.3 291 98-428 3-318 (384)
92 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 2.4E-33 8.2E-38 275.1 15.9 290 94-428 6-324 (371)
93 2w8t_A SPT, serine palmitoyltr 100.0 4.4E-32 1.5E-36 272.0 25.2 296 93-428 62-373 (427)
94 2bwn_A 5-aminolevulinate synth 100.0 1.5E-32 5.3E-37 272.7 21.4 298 94-428 45-358 (401)
95 1fc4_A 2-amino-3-ketobutyrate 100.0 6E-32 2.1E-36 268.3 25.2 293 93-428 43-355 (401)
96 1b9h_A AHBA synthase, protein 100.0 1.2E-31 4.1E-36 265.1 25.5 286 102-428 4-319 (388)
97 2ez2_A Beta-tyrosinase, tyrosi 100.0 3.1E-32 1E-36 275.3 20.8 326 69-428 7-378 (456)
98 3kki_A CAI-1 autoinducer synth 100.0 9.8E-32 3.4E-36 267.8 22.8 295 93-428 57-362 (409)
99 2po3_A 4-dehydrase; external a 100.0 1.4E-30 4.8E-35 260.8 30.6 290 99-428 20-326 (424)
100 3cai_A Possible aminotransfera 100.0 2.6E-31 9E-36 264.0 24.8 296 96-428 26-361 (406)
101 1svv_A Threonine aldolase; str 100.0 2E-31 6.7E-36 259.9 23.0 297 95-428 13-320 (359)
102 2ch1_A 3-hydroxykynurenine tra 100.0 1.1E-31 3.7E-36 265.7 19.7 291 100-428 20-343 (396)
103 4eb5_A Probable cysteine desul 100.0 3.9E-31 1.3E-35 260.1 22.7 291 98-428 2-315 (382)
104 3f9t_A TDC, L-tyrosine decarbo 100.0 6.6E-31 2.2E-35 259.4 24.1 290 107-428 40-362 (397)
105 2huf_A Alanine glyoxylate amin 100.0 2.3E-31 7.8E-36 263.2 20.8 291 96-428 19-343 (393)
106 2aeu_A Hypothetical protein MJ 100.0 1.9E-30 6.5E-35 255.7 27.0 296 90-428 22-330 (374)
107 2z9v_A Aspartate aminotransfer 100.0 4.2E-31 1.4E-35 261.1 20.9 293 97-428 9-331 (392)
108 2eh6_A Acoat, acetylornithine 100.0 4E-31 1.4E-35 259.9 20.3 291 93-428 26-343 (375)
109 3lvm_A Cysteine desulfurase; s 100.0 4.8E-31 1.6E-35 263.5 20.1 296 92-422 18-338 (423)
110 3ruy_A Ornithine aminotransfer 100.0 9.3E-31 3.2E-35 259.0 21.4 297 93-429 34-360 (392)
111 1jg8_A L-ALLO-threonine aldola 100.0 8.3E-31 2.8E-35 254.9 20.4 292 96-428 4-311 (347)
112 3zrp_A Serine-pyruvate aminotr 100.0 2.7E-30 9.2E-35 254.2 24.0 286 105-428 9-325 (384)
113 2rfv_A Methionine gamma-lyase; 100.0 2.5E-30 8.4E-35 256.9 23.7 268 98-397 23-318 (398)
114 1iug_A Putative aspartate amin 100.0 8.7E-31 3E-35 254.8 20.0 281 106-428 9-309 (352)
115 1sff_A 4-aminobutyrate aminotr 100.0 1.5E-31 5E-36 267.6 14.7 312 93-428 39-387 (426)
116 4hvk_A Probable cysteine desul 100.0 4.7E-30 1.6E-34 251.9 23.7 292 98-428 2-315 (382)
117 1m32_A 2-aminoethylphosphonate 100.0 2E-30 6.8E-35 253.3 20.9 293 97-428 5-327 (366)
118 2dkj_A Serine hydroxymethyltra 100.0 2.1E-30 7.2E-35 257.4 21.0 300 95-428 23-339 (407)
119 1ax4_A Tryptophanase; tryptoph 100.0 1.5E-30 5.3E-35 263.5 20.1 333 69-428 8-388 (467)
120 2ord_A Acoat, acetylornithine 100.0 2.8E-30 9.7E-35 256.1 20.5 297 93-428 38-362 (397)
121 3nnk_A Ureidoglycine-glyoxylat 100.0 8E-30 2.7E-34 253.4 23.6 286 106-428 21-350 (411)
122 1v72_A Aldolase; PLP-dependent 100.0 6.7E-30 2.3E-34 248.9 21.5 292 95-428 7-316 (356)
123 3isl_A Purine catabolism prote 100.0 3E-29 1E-33 249.7 26.6 286 106-428 19-350 (416)
124 2yrr_A Aminotransferase, class 100.0 2.1E-30 7.1E-35 251.9 17.7 282 106-428 8-313 (353)
125 3i4j_A Aminotransferase, class 100.0 2.5E-29 8.5E-34 252.1 25.6 322 93-428 27-386 (430)
126 3kgw_A Alanine-glyoxylate amin 100.0 1.5E-29 5.2E-34 249.6 22.6 291 103-428 28-348 (393)
127 4adb_A Succinylornithine trans 100.0 2.2E-29 7.6E-34 250.1 23.7 299 93-428 37-365 (406)
128 2eo5_A 419AA long hypothetical 100.0 2E-29 6.7E-34 252.1 22.9 302 93-428 40-383 (419)
129 3vax_A Putative uncharacterize 100.0 5.7E-30 2E-34 253.7 18.6 296 95-428 19-341 (400)
130 2oga_A Transaminase; PLP-depen 100.0 2.4E-29 8.3E-34 249.7 23.1 287 95-428 30-334 (399)
131 1ibj_A CBL, cystathionine beta 100.0 4.8E-30 1.7E-34 259.3 17.1 291 96-428 90-404 (464)
132 2c81_A Glutamine-2-deoxy-scyll 100.0 3.5E-28 1.2E-32 242.9 30.4 292 101-427 5-334 (418)
133 1vef_A Acetylornithine/acetyl- 100.0 2.6E-29 9E-34 248.9 21.4 299 93-428 43-362 (395)
134 3pj0_A LMO0305 protein; struct 100.0 1.3E-29 4.3E-34 247.7 18.3 295 95-428 13-318 (359)
135 3nx3_A Acoat, acetylornithine 100.0 2.3E-28 8E-33 242.1 26.7 302 93-428 34-360 (395)
136 1s0a_A Adenosylmethionine-8-am 100.0 2.8E-28 9.5E-33 244.4 27.5 309 93-429 41-391 (429)
137 3f0h_A Aminotransferase; RER07 100.0 1.2E-28 4E-33 242.3 23.8 293 97-428 20-335 (376)
138 3mc6_A Sphingosine-1-phosphate 100.0 2E-28 6.9E-33 250.1 26.5 294 108-428 75-402 (497)
139 2pb2_A Acetylornithine/succiny 100.0 1.2E-28 4E-33 246.7 24.0 300 93-428 55-383 (420)
140 3ffr_A Phosphoserine aminotran 100.0 1.8E-28 6.2E-33 239.1 24.6 293 97-428 5-325 (362)
141 3mad_A Sphingosine-1-phosphate 100.0 1.5E-28 5.3E-33 252.1 24.4 288 113-428 116-432 (514)
142 3gju_A Putative aminotransfera 100.0 6.5E-28 2.2E-32 244.1 27.9 323 93-428 49-420 (460)
143 3n0l_A Serine hydroxymethyltra 100.0 1.9E-28 6.4E-33 244.1 23.5 298 96-428 26-340 (417)
144 3a9z_A Selenocysteine lyase; P 100.0 8.9E-29 3E-33 247.9 21.0 260 96-383 18-330 (432)
145 1mdo_A ARNB aminotransferase; 100.0 9.8E-28 3.4E-32 237.2 28.0 285 96-428 9-326 (393)
146 2bkw_A Alanine-glyoxylate amin 100.0 1.5E-28 5E-33 242.0 21.3 293 96-428 5-340 (385)
147 3dxv_A Alpha-amino-epsilon-cap 100.0 1.3E-28 4.6E-33 247.4 21.3 314 93-428 41-388 (439)
148 1zod_A DGD, 2,2-dialkylglycine 100.0 1.7E-28 5.7E-33 246.2 21.4 314 93-428 41-393 (433)
149 3lws_A Aromatic amino acid bet 100.0 8.9E-29 3E-33 241.6 18.3 264 126-428 41-316 (357)
150 4a6r_A Omega transaminase; tra 100.0 9.9E-28 3.4E-32 242.6 26.4 323 93-428 48-415 (459)
151 1w23_A Phosphoserine aminotran 100.0 1.4E-29 4.8E-34 247.3 12.1 291 96-428 3-323 (360)
152 1qz9_A Kynureninase; kynurenin 100.0 5E-28 1.7E-32 241.1 22.8 291 96-428 28-366 (416)
153 4ffc_A 4-aminobutyrate aminotr 100.0 4.6E-28 1.6E-32 244.6 22.4 320 93-428 62-412 (453)
154 1rv3_A Serine hydroxymethyltra 100.0 5.7E-28 2E-32 245.8 21.7 325 68-428 21-383 (483)
155 2dgk_A GAD-beta, GADB, glutama 100.0 6.1E-27 2.1E-31 236.4 27.6 322 81-428 26-392 (452)
156 3dr4_A Putative perosamine syn 100.0 7.7E-27 2.6E-31 230.9 27.8 288 95-428 22-334 (391)
157 2oqx_A Tryptophanase; lyase, p 100.0 1.3E-28 4.6E-33 249.2 15.5 329 70-428 7-389 (467)
158 3ecd_A Serine hydroxymethyltra 100.0 4.2E-27 1.4E-31 234.8 25.1 323 68-428 9-348 (425)
159 3n5m_A Adenosylmethionine-8-am 100.0 5.1E-27 1.7E-31 236.9 25.9 318 93-428 47-411 (452)
160 2oat_A Ornithine aminotransfer 100.0 4.2E-27 1.4E-31 236.7 24.6 297 93-429 74-405 (439)
161 1z7d_A Ornithine aminotransfer 100.0 3.2E-27 1.1E-31 237.1 23.7 299 93-428 63-394 (433)
162 1wyu_B Glycine dehydrogenase s 100.0 3.4E-27 1.2E-31 239.6 24.0 313 82-428 49-401 (474)
163 3ndn_A O-succinylhomoserine su 100.0 9.9E-27 3.4E-31 231.9 26.6 233 135-398 80-335 (414)
164 3gbx_A Serine hydroxymethyltra 100.0 3E-27 1E-31 235.5 22.6 299 96-428 31-347 (420)
165 3l44_A Glutamate-1-semialdehyd 100.0 1.1E-27 3.8E-32 240.3 19.5 314 93-428 53-397 (434)
166 2c0r_A PSAT, phosphoserine ami 100.0 3E-28 1E-32 238.4 14.4 288 96-428 4-324 (362)
167 2fnu_A Aminotransferase; prote 100.0 8.8E-27 3E-31 228.6 24.7 273 109-428 11-312 (375)
168 3dod_A Adenosylmethionine-8-am 100.0 5.7E-27 1.9E-31 236.3 22.8 319 93-428 42-409 (448)
169 3tfu_A Adenosylmethionine-8-am 100.0 3E-27 1E-31 238.9 20.7 308 93-428 71-419 (457)
170 3oks_A 4-aminobutyrate transam 100.0 3.2E-27 1.1E-31 238.4 20.7 320 93-428 59-414 (451)
171 3uwc_A Nucleotide-sugar aminot 100.0 9.4E-27 3.2E-31 228.6 23.5 285 95-428 6-309 (374)
172 3a8u_X Omega-amino acid--pyruv 99.9 5.1E-27 1.7E-31 236.6 21.3 310 93-428 48-413 (449)
173 1o69_A Aminotransferase; struc 99.9 2.7E-26 9.3E-31 227.4 26.1 281 110-428 11-328 (394)
174 2vi8_A Serine hydroxymethyltra 99.9 9.3E-27 3.2E-31 231.0 22.7 298 96-428 25-338 (405)
175 3cog_A Cystathionine gamma-lya 99.9 4.7E-27 1.6E-31 233.7 20.5 194 126-349 62-262 (403)
176 3h7f_A Serine hydroxymethyltra 99.9 1E-26 3.5E-31 234.5 22.9 324 68-428 22-365 (447)
177 3nyt_A Aminotransferase WBPE; 99.9 1.6E-26 5.5E-31 226.8 23.5 270 109-428 14-305 (367)
178 1cs1_A CGS, protein (cystathio 99.9 4.2E-26 1.4E-30 225.4 25.6 217 130-381 50-272 (386)
179 1gc0_A Methionine gamma-lyase; 99.9 2.5E-26 8.5E-31 228.1 23.6 216 130-380 63-285 (398)
180 3i5t_A Aminotransferase; pyrid 99.9 8.3E-26 2.8E-30 229.5 27.8 317 93-428 52-420 (476)
181 3qhx_A Cystathionine gamma-syn 99.9 4.3E-26 1.5E-30 225.9 24.7 217 132-383 66-288 (392)
182 3k28_A Glutamate-1-semialdehyd 99.9 6.6E-27 2.3E-31 234.5 18.8 313 93-428 51-394 (429)
183 3hmu_A Aminotransferase, class 99.9 4.7E-26 1.6E-30 231.0 24.2 319 93-428 53-418 (472)
184 3e9k_A Kynureninase; kynurenin 99.9 1.4E-26 4.8E-31 234.5 18.5 296 95-428 66-425 (465)
185 2cy8_A D-phgat, D-phenylglycin 99.9 3.6E-26 1.2E-30 230.7 21.1 305 93-428 55-404 (453)
186 1pff_A Methionine gamma-lyase; 99.9 6.2E-26 2.1E-30 219.2 21.6 185 136-348 2-194 (331)
187 2cb1_A O-acetyl homoserine sul 99.9 6.5E-25 2.2E-29 218.9 29.6 241 106-384 31-306 (412)
188 3fq8_A Glutamate-1-semialdehyd 99.9 4.3E-26 1.5E-30 228.3 20.8 311 93-428 50-394 (427)
189 2fyf_A PSAT, phosphoserine ami 99.9 7.8E-26 2.7E-30 224.3 21.0 287 96-428 40-359 (398)
190 3ju7_A Putative PLP-dependent 99.9 3.2E-25 1.1E-29 218.5 24.9 284 99-428 4-315 (377)
191 3acz_A Methionine gamma-lyase; 99.9 1.8E-24 6.2E-29 214.1 29.1 213 131-378 58-276 (389)
192 2epj_A Glutamate-1-semialdehyd 99.9 4.7E-26 1.6E-30 228.5 18.0 306 93-428 54-398 (434)
193 2e7u_A Glutamate-1-semialdehyd 99.9 4.7E-26 1.6E-30 227.9 17.9 306 93-428 50-394 (424)
194 1qgn_A Protein (cystathionine 99.9 1.9E-24 6.5E-29 216.9 28.8 218 134-386 116-340 (445)
195 2cjg_A L-lysine-epsilon aminot 99.9 6.5E-26 2.2E-30 228.7 16.7 304 93-428 52-413 (449)
196 3frk_A QDTB; aminotransferase, 99.9 1.2E-24 4.1E-29 213.8 25.2 271 110-428 16-306 (373)
197 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 4.1E-24 1.4E-28 214.7 29.6 286 94-428 30-373 (437)
198 4e77_A Glutamate-1-semialdehyd 99.9 1.9E-25 6.3E-30 223.9 19.0 311 93-428 51-396 (429)
199 3hbx_A GAD 1, glutamate decarb 99.9 4.9E-24 1.7E-28 217.8 27.5 311 93-428 53-402 (502)
200 1n8p_A Cystathionine gamma-lya 99.9 1.5E-24 5E-29 215.0 22.9 214 131-380 54-276 (393)
201 3jzl_A Putative cystathionine 99.9 1.5E-24 5.2E-29 215.3 22.1 271 111-423 32-338 (409)
202 2fq6_A Cystathionine beta-lyas 99.9 9.2E-24 3.1E-28 210.4 27.8 214 134-382 84-304 (415)
203 3ri6_A O-acetylhomoserine sulf 99.9 2E-24 6.8E-29 216.0 22.8 233 131-398 81-356 (430)
204 3ht4_A Aluminum resistance pro 99.9 7E-25 2.4E-29 219.4 19.5 258 136-424 65-345 (431)
205 1js3_A DDC;, DOPA decarboxylas 99.9 2E-24 6.8E-29 219.9 23.0 291 110-426 87-433 (486)
206 3i16_A Aluminum resistance pro 99.9 1.2E-24 4E-29 216.8 19.2 252 132-423 73-355 (427)
207 3hvy_A Cystathionine beta-lyas 99.9 1.8E-24 6.2E-29 215.5 19.5 270 111-423 47-355 (427)
208 3b8x_A WBDK, pyridoxamine 5-ph 99.9 8.1E-23 2.8E-27 202.0 31.1 286 97-429 3-333 (390)
209 2okj_A Glutamate decarboxylase 99.9 3.9E-23 1.3E-27 211.3 29.7 274 110-397 105-427 (504)
210 2a7v_A Serine hydroxymethyltra 99.9 8.2E-24 2.8E-28 214.1 24.0 325 70-429 33-394 (490)
211 3vp6_A Glutamate decarboxylase 99.9 2.7E-23 9.1E-28 212.7 27.3 304 110-427 109-464 (511)
212 3nmy_A Xometc, cystathionine g 99.9 4.6E-23 1.6E-27 204.5 26.9 214 134-383 69-290 (400)
213 2x3l_A ORN/Lys/Arg decarboxyla 99.9 2.5E-24 8.5E-29 216.8 17.7 256 130-428 55-319 (446)
214 2z67_A O-phosphoseryl-tRNA(SEC 99.9 6.3E-24 2.1E-28 214.6 18.2 261 134-426 131-406 (456)
215 1wyu_A Glycine dehydrogenase ( 99.9 1.9E-23 6.6E-28 209.8 21.2 305 82-428 49-400 (438)
216 4e1o_A HDC, histidine decarbox 99.9 4E-22 1.4E-26 202.6 23.8 294 110-427 92-438 (481)
217 2yky_A Beta-transaminase; tran 99.8 3.1E-25 1.1E-29 223.3 0.0 308 92-428 97-429 (465)
218 2ctz_A O-acetyl-L-homoserine s 99.9 1.6E-21 5.3E-26 195.0 26.2 216 134-384 60-314 (421)
219 2jis_A Cysteine sulfinic acid 99.9 2E-21 6.9E-26 199.1 26.9 273 109-397 120-440 (515)
220 2qma_A Diaminobutyrate-pyruvat 99.9 7E-22 2.4E-26 201.7 22.8 293 108-428 111-456 (497)
221 1ohv_A 4-aminobutyrate aminotr 99.9 1.3E-22 4.3E-27 205.8 15.5 305 93-428 61-436 (472)
222 3ke3_A Putative serine-pyruvat 99.9 1.2E-21 4E-26 193.0 21.8 234 135-387 34-302 (379)
223 3k40_A Aromatic-L-amino-acid d 99.9 1.5E-21 5.2E-26 198.0 22.1 294 110-428 87-432 (475)
224 1c4k_A Protein (ornithine deca 99.9 4.7E-21 1.6E-25 202.2 22.2 236 134-386 175-447 (730)
225 2vyc_A Biodegradative arginine 99.8 6.6E-20 2.3E-24 195.0 22.3 229 135-380 208-466 (755)
226 3n75_A LDC, lysine decarboxyla 99.8 8.5E-19 2.9E-23 183.7 21.4 225 134-378 197-442 (715)
227 3e77_A Phosphoserine aminotran 99.7 4.8E-17 1.6E-21 159.2 14.6 289 105-428 20-338 (377)
228 3m5u_A Phosphoserine aminotran 99.7 7.4E-16 2.5E-20 150.1 17.7 290 96-428 5-323 (361)
229 4ao9_A Beta-phenylalanine amin 99.7 3.8E-15 1.3E-19 148.8 20.1 258 92-377 84-360 (454)
230 3qm2_A Phosphoserine aminotran 99.7 7E-16 2.4E-20 151.6 13.9 277 108-428 37-348 (386)
231 3ou5_A Serine hydroxymethyltra 99.6 2.7E-14 9.2E-19 139.4 20.9 325 69-429 32-394 (490)
232 3hl2_A O-phosphoseryl-tRNA(SEC 99.5 3.6E-14 1.2E-18 139.1 13.7 248 136-398 116-379 (501)
233 3bc8_A O-phosphoseryl-tRNA(SEC 99.5 5.4E-14 1.9E-18 139.3 15.1 238 133-384 95-346 (450)
234 4e3q_A Pyruvate transaminase; 99.5 2.3E-12 7.7E-17 129.7 26.8 318 93-428 65-434 (473)
235 4atq_A 4-aminobutyrate transam 99.5 1.3E-12 4.6E-17 130.9 23.2 248 92-349 61-341 (456)
236 4a0g_A Adenosylmethionine-8-am 99.4 7E-13 2.4E-17 142.1 14.3 317 96-428 381-794 (831)
237 4fgs_A Probable dehydrogenase 80.9 4.5 0.00015 36.8 7.8 97 154-256 28-133 (273)
238 3rwb_A TPLDH, pyridoxal 4-dehy 79.1 7.7 0.00026 34.3 8.7 98 154-256 5-110 (247)
239 3gh5_A HEX1, beta-hexosaminida 76.9 6.5 0.00022 39.3 8.1 114 149-267 124-274 (525)
240 4dqx_A Probable oxidoreductase 76.1 11 0.00037 34.0 9.0 99 153-256 25-131 (277)
241 3tpc_A Short chain alcohol deh 74.9 12 0.00041 33.2 8.8 98 154-256 6-115 (257)
242 4g81_D Putative hexonate dehyd 72.6 15 0.00052 32.8 8.8 98 153-256 7-116 (255)
243 3tzq_B Short-chain type dehydr 72.3 20 0.0007 32.0 9.8 97 154-255 10-116 (271)
244 2o23_A HADH2 protein; HSD17B10 72.1 29 0.00099 30.5 10.7 97 154-255 11-121 (265)
245 3m1a_A Putative dehydrogenase; 70.7 16 0.00053 32.8 8.6 94 156-254 6-107 (281)
246 4e6p_A Probable sorbitol dehyd 70.2 15 0.00053 32.5 8.4 97 154-255 7-111 (259)
247 3grp_A 3-oxoacyl-(acyl carrier 70.1 12 0.00042 33.4 7.7 98 154-256 26-131 (266)
248 3gvc_A Oxidoreductase, probabl 70.1 11 0.00038 34.0 7.4 98 154-256 28-133 (277)
249 3gem_A Short chain dehydrogena 69.6 19 0.00064 32.1 8.8 96 154-256 26-128 (260)
250 3h7a_A Short chain dehydrogena 69.1 29 0.00097 30.6 9.9 98 154-256 6-113 (252)
251 3pxx_A Carveol dehydrogenase; 68.7 13 0.00043 33.5 7.5 98 154-256 9-127 (287)
252 1jak_A Beta-N-acetylhexosamini 68.5 11 0.00037 37.6 7.5 113 150-267 101-249 (512)
253 3sc4_A Short chain dehydrogena 68.2 46 0.0016 29.8 11.3 99 153-256 7-123 (285)
254 3rd5_A Mypaa.01249.C; ssgcid, 67.8 8.1 0.00028 35.1 6.0 75 154-233 15-91 (291)
255 2gjx_A Beta-hexosaminidase alp 67.2 10 0.00034 37.9 6.9 108 151-267 96-233 (507)
256 3ppi_A 3-hydroxyacyl-COA dehyd 66.8 11 0.00039 33.8 6.8 98 154-256 29-139 (281)
257 4eso_A Putative oxidoreductase 66.1 15 0.00052 32.5 7.4 98 154-256 7-112 (255)
258 4hp8_A 2-deoxy-D-gluconate 3-d 65.6 16 0.00056 32.5 7.4 99 153-256 7-109 (247)
259 2ew8_A (S)-1-phenylethanol deh 65.5 34 0.0011 30.0 9.6 97 155-256 7-112 (249)
260 3n74_A 3-ketoacyl-(acyl-carrie 65.3 24 0.00083 31.0 8.7 98 153-255 7-113 (261)
261 3rih_A Short chain dehydrogena 65.3 39 0.0013 30.6 10.2 98 154-256 40-149 (293)
262 2yv2_A Succinyl-COA synthetase 64.8 59 0.002 29.7 11.2 78 185-273 55-133 (297)
263 4ibo_A Gluconate dehydrogenase 64.1 26 0.0009 31.3 8.7 99 153-256 24-133 (271)
264 3kvo_A Hydroxysteroid dehydrog 63.9 66 0.0022 29.9 11.7 97 154-255 44-158 (346)
265 1uls_A Putative 3-oxoacyl-acyl 63.9 27 0.00094 30.5 8.6 95 155-256 5-107 (245)
266 4fc7_A Peroxisomal 2,4-dienoyl 63.8 35 0.0012 30.5 9.5 98 154-256 26-135 (277)
267 3t7c_A Carveol dehydrogenase; 63.8 33 0.0011 31.0 9.5 99 153-256 26-148 (299)
268 3op4_A 3-oxoacyl-[acyl-carrier 63.3 21 0.00071 31.4 7.7 98 154-256 8-113 (248)
269 3l6e_A Oxidoreductase, short-c 63.2 18 0.0006 31.6 7.2 96 156-256 4-107 (235)
270 4fn4_A Short chain dehydrogena 63.0 24 0.00083 31.5 8.0 97 154-256 6-115 (254)
271 1hxh_A 3BETA/17BETA-hydroxyste 62.4 32 0.0011 30.2 8.8 97 155-256 6-110 (253)
272 3l77_A Short-chain alcohol deh 62.3 42 0.0014 28.9 9.5 95 157-256 4-110 (235)
273 3rjz_A N-type ATP pyrophosphat 62.2 57 0.002 28.7 10.2 99 157-266 7-120 (237)
274 3gaf_A 7-alpha-hydroxysteroid 61.7 29 0.00099 30.6 8.4 98 153-255 10-117 (256)
275 2yv1_A Succinyl-COA ligase [AD 61.6 39 0.0013 30.8 9.4 77 186-273 56-132 (294)
276 3lyl_A 3-oxoacyl-(acyl-carrier 61.6 33 0.0011 29.9 8.7 98 154-256 4-112 (247)
277 3e03_A Short chain dehydrogena 61.3 72 0.0025 28.3 11.2 99 153-256 4-120 (274)
278 1vl8_A Gluconate 5-dehydrogena 61.2 35 0.0012 30.3 9.0 98 154-256 20-129 (267)
279 1oi7_A Succinyl-COA synthetase 61.1 57 0.002 29.6 10.4 77 186-273 50-126 (288)
280 3tfo_A Putative 3-oxoacyl-(acy 60.8 37 0.0013 30.2 9.0 96 156-256 5-111 (264)
281 3rkr_A Short chain oxidoreduct 60.4 39 0.0013 29.8 9.1 97 155-256 29-137 (262)
282 3tsc_A Putative oxidoreductase 60.2 24 0.00082 31.5 7.7 98 154-256 10-131 (277)
283 3sx2_A Putative 3-ketoacyl-(ac 60.2 22 0.00076 31.7 7.4 96 154-256 12-128 (278)
284 3r1i_A Short-chain type dehydr 59.6 58 0.002 29.0 10.2 99 153-256 30-139 (276)
285 3fkr_A L-2-keto-3-deoxyarabona 59.2 1.1E+02 0.0037 28.0 12.8 88 157-271 79-175 (309)
286 4dyv_A Short-chain dehydrogena 59.2 27 0.00094 31.2 7.8 96 156-256 29-133 (272)
287 4gkb_A 3-oxoacyl-[acyl-carrier 59.2 64 0.0022 28.7 10.2 98 153-256 5-112 (258)
288 1hdc_A 3-alpha, 20 beta-hydrox 59.1 28 0.00097 30.6 7.9 96 155-255 5-108 (254)
289 4dmm_A 3-oxoacyl-[acyl-carrier 59.0 23 0.00079 31.6 7.3 99 153-256 26-136 (269)
290 3guy_A Short-chain dehydrogena 59.0 14 0.00047 32.1 5.6 95 157-256 3-102 (230)
291 3s55_A Putative short-chain de 58.8 47 0.0016 29.5 9.5 97 154-255 9-128 (281)
292 3uve_A Carveol dehydrogenase ( 58.8 23 0.00079 31.8 7.3 99 153-256 9-135 (286)
293 3ksu_A 3-oxoacyl-acyl carrier 58.7 84 0.0029 27.6 11.0 99 153-256 9-121 (262)
294 1x1t_A D(-)-3-hydroxybutyrate 58.7 44 0.0015 29.3 9.1 95 156-255 5-112 (260)
295 3qlj_A Short chain dehydrogena 58.6 32 0.0011 31.6 8.4 97 155-256 27-144 (322)
296 2jah_A Clavulanic acid dehydro 58.6 44 0.0015 29.2 9.0 96 155-255 7-113 (247)
297 3is3_A 17BETA-hydroxysteroid d 58.0 22 0.00077 31.6 7.0 98 154-256 17-126 (270)
298 2c07_A 3-oxoacyl-(acyl-carrier 57.6 67 0.0023 28.6 10.3 95 156-255 45-150 (285)
299 3ged_A Short-chain dehydrogena 57.6 31 0.0011 30.6 7.7 94 157-256 4-105 (247)
300 3tjr_A Short chain dehydrogena 57.4 40 0.0014 30.5 8.8 97 154-255 30-137 (301)
301 3f9i_A 3-oxoacyl-[acyl-carrier 57.1 22 0.00076 31.0 6.8 77 154-235 13-91 (249)
302 2q2v_A Beta-D-hydroxybutyrate 57.1 72 0.0025 27.8 10.3 95 156-255 5-108 (255)
303 3uf0_A Short-chain dehydrogena 56.8 71 0.0024 28.4 10.2 98 153-256 29-136 (273)
304 2ae2_A Protein (tropinone redu 56.6 59 0.002 28.5 9.6 97 154-255 8-116 (260)
305 3qiv_A Short-chain dehydrogena 56.2 50 0.0017 28.8 9.0 98 153-255 7-118 (253)
306 4b79_A PA4098, probable short- 56.1 34 0.0011 30.3 7.6 93 155-256 11-106 (242)
307 2yvq_A Carbamoyl-phosphate syn 56.1 76 0.0026 25.3 10.2 111 150-268 19-131 (143)
308 3ai3_A NADPH-sorbose reductase 56.1 53 0.0018 28.9 9.2 97 154-255 6-114 (263)
309 3edm_A Short chain dehydrogena 55.9 52 0.0018 28.9 9.1 98 154-256 7-117 (259)
310 3sju_A Keto reductase; short-c 55.7 40 0.0014 30.2 8.3 96 156-256 25-131 (279)
311 3vnd_A TSA, tryptophan synthas 55.4 1.2E+02 0.004 27.2 15.7 168 83-267 34-211 (267)
312 3nav_A Tryptophan synthase alp 55.0 1.2E+02 0.0041 27.2 13.6 168 84-267 37-213 (271)
313 3v2h_A D-beta-hydroxybutyrate 54.9 54 0.0018 29.3 9.1 98 154-256 24-134 (281)
314 1o5k_A DHDPS, dihydrodipicolin 54.9 1E+02 0.0034 28.2 11.0 85 157-270 83-176 (306)
315 1nff_A Putative oxidoreductase 54.8 44 0.0015 29.5 8.4 96 154-254 6-109 (260)
316 3pgx_A Carveol dehydrogenase; 54.8 30 0.001 30.9 7.3 98 154-256 14-135 (280)
317 4imr_A 3-oxoacyl-(acyl-carrier 54.6 60 0.002 28.9 9.3 99 153-256 31-139 (275)
318 3v2g_A 3-oxoacyl-[acyl-carrier 54.5 62 0.0021 28.7 9.4 99 153-256 29-139 (271)
319 2rhc_B Actinorhodin polyketide 54.3 47 0.0016 29.6 8.6 96 155-255 22-128 (277)
320 1now_A Beta-hexosaminidase bet 54.2 18 0.00062 36.0 6.1 108 150-267 101-238 (507)
321 3ak4_A NADH-dependent quinucli 54.1 41 0.0014 29.6 8.1 97 154-255 11-115 (263)
322 3awd_A GOX2181, putative polyo 53.9 61 0.0021 28.2 9.2 78 154-236 12-98 (260)
323 1ae1_A Tropinone reductase-I; 53.4 71 0.0024 28.2 9.7 97 154-255 20-128 (273)
324 3oec_A Carveol dehydrogenase ( 53.2 34 0.0012 31.3 7.6 98 154-256 45-165 (317)
325 3zv4_A CIS-2,3-dihydrobiphenyl 52.8 37 0.0013 30.4 7.7 68 154-226 4-71 (281)
326 3imf_A Short chain dehydrogena 52.5 52 0.0018 28.9 8.5 97 155-256 6-113 (257)
327 1c7s_A Beta-N-acetylhexosamini 52.4 16 0.00055 38.8 5.5 115 151-267 264-418 (858)
328 2a4k_A 3-oxoacyl-[acyl carrier 52.4 39 0.0013 29.9 7.6 97 155-256 6-110 (263)
329 1geg_A Acetoin reductase; SDR 52.3 48 0.0016 29.0 8.2 94 157-255 4-108 (256)
330 4iin_A 3-ketoacyl-acyl carrier 52.2 42 0.0014 29.7 7.9 100 152-256 26-137 (271)
331 2wsb_A Galactitol dehydrogenas 52.2 50 0.0017 28.7 8.3 96 154-254 10-113 (254)
332 1iy8_A Levodione reductase; ox 52.1 58 0.002 28.7 8.8 97 154-255 12-122 (267)
333 3lf2_A Short chain oxidoreduct 51.8 68 0.0023 28.3 9.2 99 153-256 6-117 (265)
334 2nu8_A Succinyl-COA ligase [AD 51.5 23 0.0008 32.2 6.0 75 187-272 51-125 (288)
335 2vc6_A MOSA, dihydrodipicolina 51.4 1.4E+02 0.0047 27.0 11.2 88 157-270 71-164 (292)
336 1fmc_A 7 alpha-hydroxysteroid 51.1 81 0.0028 27.2 9.5 95 154-253 10-114 (255)
337 1zk4_A R-specific alcohol dehy 51.0 57 0.002 28.2 8.5 96 155-255 6-111 (251)
338 3zu3_A Putative reductase YPO4 50.9 1.2E+02 0.0042 29.0 11.1 68 154-226 46-129 (405)
339 3ijr_A Oxidoreductase, short c 50.9 71 0.0024 28.7 9.3 98 154-256 46-156 (291)
340 2uvd_A 3-oxoacyl-(acyl-carrier 50.6 56 0.0019 28.4 8.3 96 156-256 5-112 (246)
341 3a28_C L-2.3-butanediol dehydr 50.4 55 0.0019 28.7 8.3 94 157-255 4-110 (258)
342 3afn_B Carbonyl reductase; alp 50.0 1E+02 0.0035 26.5 10.1 95 156-255 8-115 (258)
343 3oid_A Enoyl-[acyl-carrier-pro 49.5 67 0.0023 28.2 8.7 96 156-256 5-112 (258)
344 2z1n_A Dehydrogenase; reductas 49.4 77 0.0026 27.7 9.1 97 154-255 6-114 (260)
345 3ucx_A Short chain dehydrogena 49.3 57 0.0019 28.8 8.2 98 154-256 10-119 (264)
346 3t4x_A Oxidoreductase, short c 49.0 70 0.0024 28.2 8.8 98 153-255 8-114 (267)
347 3v8b_A Putative dehydrogenase, 48.9 69 0.0024 28.6 8.8 98 154-256 27-136 (283)
348 3osu_A 3-oxoacyl-[acyl-carrier 48.9 45 0.0015 29.1 7.4 96 156-256 5-112 (246)
349 3ftp_A 3-oxoacyl-[acyl-carrier 48.6 57 0.0019 29.0 8.1 98 154-256 27-135 (270)
350 1yb1_A 17-beta-hydroxysteroid 48.5 58 0.002 28.8 8.2 80 153-237 29-117 (272)
351 4egf_A L-xylulose reductase; s 48.5 49 0.0017 29.2 7.7 98 154-256 19-128 (266)
352 3r3s_A Oxidoreductase; structu 48.0 79 0.0027 28.4 9.1 98 154-256 48-159 (294)
353 3ic5_A Putative saccharopine d 48.0 74 0.0025 23.4 7.7 91 156-266 6-97 (118)
354 3gdg_A Probable NADP-dependent 47.9 94 0.0032 27.1 9.5 99 153-256 18-131 (267)
355 3o38_A Short chain dehydrogena 47.9 52 0.0018 28.9 7.8 98 154-256 21-131 (266)
356 1bqc_A Protein (beta-mannanase 47.9 37 0.0013 30.8 6.8 48 192-268 37-84 (302)
357 3cxt_A Dehydrogenase with diff 47.8 57 0.0019 29.4 8.1 97 153-254 32-139 (291)
358 2pnf_A 3-oxoacyl-[acyl-carrier 47.7 71 0.0024 27.5 8.5 97 154-255 6-114 (248)
359 1cyd_A Carbonyl reductase; sho 47.5 1.1E+02 0.0039 26.1 9.8 94 154-254 6-104 (244)
360 3d3w_A L-xylulose reductase; u 47.2 1.1E+02 0.0037 26.2 9.7 74 154-234 6-82 (244)
361 2cfc_A 2-(R)-hydroxypropyl-COM 46.8 49 0.0017 28.6 7.3 75 157-236 4-88 (250)
362 3tox_A Short chain dehydrogena 46.6 83 0.0028 28.1 8.9 98 154-256 7-116 (280)
363 1w6u_A 2,4-dienoyl-COA reducta 46.5 75 0.0026 28.4 8.7 95 156-255 27-133 (302)
364 3mwd_B ATP-citrate synthase; A 46.4 39 0.0013 31.5 6.7 76 186-272 64-141 (334)
365 2b4q_A Rhamnolipids biosynthes 46.2 83 0.0028 27.9 8.9 96 154-255 28-134 (276)
366 3pk0_A Short-chain dehydrogena 45.7 66 0.0023 28.3 8.1 97 154-255 9-117 (262)
367 1zem_A Xylitol dehydrogenase; 45.7 85 0.0029 27.5 8.8 97 154-255 6-114 (262)
368 2d1y_A Hypothetical protein TT 45.7 1.4E+02 0.0048 25.9 10.2 93 155-255 6-106 (256)
369 3ozo_A N-acetylglucosaminidase 44.7 63 0.0022 32.5 8.3 24 242-266 250-273 (572)
370 2fp4_A Succinyl-COA ligase [GD 44.4 1.1E+02 0.0039 27.8 9.5 78 186-273 57-134 (305)
371 1xq1_A Putative tropinone redu 44.4 91 0.0031 27.2 8.8 97 154-255 13-121 (266)
372 1xkq_A Short-chain reductase f 44.0 58 0.002 28.9 7.5 96 155-255 6-119 (280)
373 1yxm_A Pecra, peroxisomal tran 43.9 87 0.003 28.0 8.8 97 154-255 17-129 (303)
374 3bk2_A RNAse J, metal dependen 43.9 43 0.0015 33.7 7.1 98 157-263 308-423 (562)
375 3tl3_A Short-chain type dehydr 43.9 31 0.0011 30.3 5.5 94 154-256 8-113 (257)
376 1xhl_A Short-chain dehydrogena 43.3 61 0.0021 29.2 7.5 96 154-254 25-136 (297)
377 2bgk_A Rhizome secoisolaricire 43.1 1E+02 0.0034 27.1 8.9 76 155-235 16-99 (278)
378 1edo_A Beta-keto acyl carrier 42.5 99 0.0034 26.4 8.6 94 157-255 3-108 (244)
379 1spx_A Short-chain reductase f 42.4 52 0.0018 29.1 6.9 66 156-226 7-78 (278)
380 3nyw_A Putative oxidoreductase 42.2 52 0.0018 28.8 6.7 97 154-255 6-115 (250)
381 1h5q_A NADP-dependent mannitol 42.1 1.2E+02 0.004 26.3 9.1 66 156-226 15-84 (265)
382 3rku_A Oxidoreductase YMR226C; 42.0 60 0.0021 29.2 7.2 97 155-256 33-146 (287)
383 3dqp_A Oxidoreductase YLBE; al 41.7 1.1E+02 0.0036 25.8 8.5 93 157-260 2-96 (219)
384 2dtx_A Glucose 1-dehydrogenase 41.5 88 0.003 27.5 8.2 89 155-256 8-104 (264)
385 1yo6_A Putative carbonyl reduc 41.3 1.4E+02 0.0048 25.3 9.5 96 156-256 4-112 (250)
386 3ezl_A Acetoacetyl-COA reducta 41.2 55 0.0019 28.5 6.7 97 155-256 13-121 (256)
387 2x9g_A PTR1, pteridine reducta 40.2 77 0.0026 28.3 7.7 70 156-226 24-98 (288)
388 2hq1_A Glucose/ribitol dehydro 39.6 89 0.0031 26.8 7.8 76 155-235 5-90 (247)
389 2bd0_A Sepiapterin reductase; 39.3 91 0.0031 26.7 7.8 95 157-256 4-116 (244)
390 3sxp_A ADP-L-glycero-D-mannohe 39.1 1.5E+02 0.0053 27.1 9.9 103 154-265 9-133 (362)
391 3u5t_A 3-oxoacyl-[acyl-carrier 38.3 1.3E+02 0.0044 26.5 8.8 97 155-256 27-135 (267)
392 3gk3_A Acetoacetyl-COA reducta 38.2 1.3E+02 0.0043 26.5 8.7 96 156-256 26-133 (269)
393 3l4b_C TRKA K+ channel protien 38.1 1.4E+02 0.0047 25.2 8.7 94 157-266 2-96 (218)
394 3ctm_A Carbonyl reductase; alc 38.1 78 0.0027 27.9 7.3 77 154-235 33-118 (279)
395 3ruf_A WBGU; rossmann fold, UD 38.0 1.5E+02 0.0052 26.9 9.6 75 154-236 24-108 (351)
396 3tak_A DHDPS, dihydrodipicolin 37.9 2.3E+02 0.0077 25.5 11.8 34 157-191 72-109 (291)
397 3svt_A Short-chain type dehydr 37.9 1.2E+02 0.0041 26.8 8.5 99 153-256 9-122 (281)
398 3i1j_A Oxidoreductase, short c 37.8 92 0.0031 26.8 7.6 99 155-256 14-125 (247)
399 1i4n_A Indole-3-glycerol phosp 37.3 30 0.001 30.9 4.2 48 214-268 109-156 (251)
400 4iiu_A 3-oxoacyl-[acyl-carrier 37.3 1.3E+02 0.0045 26.2 8.7 96 156-256 27-134 (267)
401 3f1l_A Uncharacterized oxidore 37.0 1.6E+02 0.0054 25.5 9.1 100 154-256 11-123 (252)
402 3asu_A Short-chain dehydrogena 37.0 73 0.0025 27.7 6.8 93 158-255 3-104 (248)
403 1xg5_A ARPG836; short chain de 36.9 1.5E+02 0.0052 26.0 9.1 94 155-253 32-138 (279)
404 2zat_A Dehydrogenase/reductase 36.8 1.4E+02 0.0049 25.8 8.8 97 154-255 13-121 (260)
405 2zcu_A Uncharacterized oxidore 36.6 1.4E+02 0.0047 26.1 8.8 91 158-260 2-94 (286)
406 1g0o_A Trihydroxynaphthalene r 36.5 1.7E+02 0.0058 25.8 9.4 97 155-256 29-137 (283)
407 1gee_A Glucose 1-dehydrogenase 36.4 1.1E+02 0.0038 26.4 8.0 94 156-254 8-113 (261)
408 2fwm_X 2,3-dihydro-2,3-dihydro 36.3 1.8E+02 0.0061 25.1 9.4 90 154-255 6-103 (250)
409 3u9l_A 3-oxoacyl-[acyl-carrier 36.3 1.3E+02 0.0044 27.5 8.7 95 156-255 6-116 (324)
410 2ehd_A Oxidoreductase, oxidore 35.8 1.4E+02 0.0046 25.4 8.4 92 157-255 7-107 (234)
411 3dii_A Short-chain dehydrogena 35.5 1E+02 0.0035 26.7 7.5 94 157-256 4-105 (247)
412 3dmy_A Protein FDRA; predicted 35.2 36 0.0012 33.5 4.7 72 185-268 20-92 (480)
413 1pjq_A CYSG, siroheme synthase 35.1 90 0.0031 30.4 7.6 95 153-270 10-106 (457)
414 3fwz_A Inner membrane protein 34.7 1.3E+02 0.0044 23.4 7.4 94 156-266 8-102 (140)
415 3un1_A Probable oxidoreductase 34.6 89 0.003 27.4 7.0 91 154-255 27-125 (260)
416 3a5f_A Dihydrodipicolinate syn 34.3 2.6E+02 0.0088 25.1 11.6 84 157-270 72-164 (291)
417 4fhz_A Phospholipase/carboxyle 34.2 2.5E+02 0.0086 25.0 11.3 109 147-260 150-265 (285)
418 4h27_A L-serine dehydratase/L- 34.2 98 0.0034 29.0 7.5 52 156-207 94-146 (364)
419 1ja9_A 4HNR, 1,3,6,8-tetrahydr 33.9 1.1E+02 0.0038 26.6 7.6 96 155-255 21-128 (274)
420 2epl_X N-acetyl-beta-D-glucosa 33.9 1.1E+02 0.0036 31.3 8.1 103 152-267 42-163 (627)
421 2yl5_A Beta-N-acetylhexosamini 33.9 30 0.001 33.7 3.9 29 238-267 85-113 (442)
422 2jl1_A Triphenylmethane reduct 33.7 1.5E+02 0.0051 25.9 8.5 96 157-263 2-99 (287)
423 4e3z_A Putative oxidoreductase 33.1 1.7E+02 0.0059 25.5 8.8 96 156-256 27-135 (272)
424 3ioy_A Short-chain dehydrogena 32.8 1.1E+02 0.0038 27.8 7.6 67 155-226 8-79 (319)
425 3na8_A Putative dihydrodipicol 32.8 2.2E+02 0.0074 26.0 9.5 88 157-270 95-188 (315)
426 1leh_A Leucine dehydrogenase; 32.8 1.3E+02 0.0043 28.3 8.0 63 140-203 157-220 (364)
427 3dz1_A Dihydrodipicolinate syn 32.7 1.6E+02 0.0056 26.8 8.6 93 157-272 78-174 (313)
428 2g1u_A Hypothetical protein TM 32.6 1.2E+02 0.0041 24.0 6.9 96 154-266 18-115 (155)
429 2ph3_A 3-oxoacyl-[acyl carrier 32.6 1.5E+02 0.0052 25.1 8.2 93 157-254 3-108 (245)
430 4a29_A Engineered retro-aldol 32.2 31 0.0011 30.8 3.3 82 181-272 81-162 (258)
431 4gqr_A Pancreatic alpha-amylas 31.7 29 0.00099 33.8 3.5 29 246-275 75-103 (496)
432 3tha_A Tryptophan synthase alp 31.5 2.7E+02 0.0093 24.5 12.3 164 84-267 31-204 (252)
433 1yde_A Retinal dehydrogenase/r 31.4 2.4E+02 0.0082 24.7 9.4 96 154-255 8-112 (270)
434 3p19_A BFPVVD8, putative blue 30.8 2E+02 0.007 25.1 8.8 94 155-256 16-117 (266)
435 2whl_A Beta-mannanase, baman5; 30.7 77 0.0026 28.4 6.0 17 193-209 37-53 (294)
436 3pff_A ATP-citrate synthase; p 30.5 82 0.0028 33.3 6.7 76 186-272 550-627 (829)
437 3icc_A Putative 3-oxoacyl-(acy 30.4 1.4E+02 0.0048 25.7 7.6 97 155-256 7-121 (255)
438 1oaa_A Sepiapterin reductase; 30.4 1.3E+02 0.0046 26.0 7.5 97 155-256 6-125 (259)
439 1jr2_A Uroporphyrinogen-III sy 30.4 55 0.0019 29.4 4.9 90 160-259 138-231 (286)
440 2yl6_A Beta-N-acetylhexosamini 30.4 30 0.001 33.6 3.2 28 239-267 83-110 (434)
441 4id9_A Short-chain dehydrogena 30.3 2.1E+02 0.0072 25.8 9.2 93 154-263 18-118 (347)
442 3i6i_A Putative leucoanthocyan 30.2 1.1E+02 0.0038 27.9 7.2 92 156-262 11-110 (346)
443 3si9_A DHDPS, dihydrodipicolin 30.1 2.6E+02 0.0088 25.5 9.5 88 157-270 93-186 (315)
444 4h1h_A LMO1638 protein; MCCF-l 29.9 2.1E+02 0.0072 26.3 8.9 71 176-246 9-96 (327)
445 2pju_A Propionate catabolism o 29.9 2.1E+02 0.0072 24.8 8.4 49 157-208 40-90 (225)
446 1b93_A Protein (methylglyoxal 29.8 1.8E+02 0.0062 23.6 7.3 93 165-268 23-119 (152)
447 2q5c_A NTRC family transcripti 29.8 2.4E+02 0.0083 23.6 8.7 63 135-208 14-78 (196)
448 3qze_A DHDPS, dihydrodipicolin 29.7 3.2E+02 0.011 24.8 10.2 87 157-270 94-186 (314)
449 3vtz_A Glucose 1-dehydrogenase 29.5 1.8E+02 0.0061 25.5 8.2 90 154-255 13-110 (269)
450 1vb5_A Translation initiation 29.2 1.5E+02 0.0052 26.5 7.6 117 135-267 93-216 (276)
451 3ndz_A Endoglucanase D; cellot 28.9 1E+02 0.0035 28.6 6.6 19 192-210 47-65 (345)
452 2ojp_A DHDPS, dihydrodipicolin 28.7 3.1E+02 0.011 24.6 9.7 84 157-270 72-164 (292)
453 4dry_A 3-oxoacyl-[acyl-carrier 28.7 1.6E+02 0.0056 26.0 7.8 97 155-256 33-142 (281)
454 2qq5_A DHRS1, dehydrogenase/re 28.6 1.5E+02 0.0051 25.8 7.4 65 156-225 6-73 (260)
455 3m2p_A UDP-N-acetylglucosamine 28.5 2.5E+02 0.0087 24.8 9.3 93 157-263 4-101 (311)
456 1iuk_A Hypothetical protein TT 28.3 50 0.0017 26.2 3.8 41 221-272 87-127 (140)
457 3dhn_A NAD-dependent epimerase 28.3 1.6E+02 0.0055 24.6 7.4 95 156-260 5-102 (227)
458 1o5i_A 3-oxoacyl-(acyl carrier 28.0 2.9E+02 0.0098 23.7 10.1 90 154-254 18-109 (249)
459 4f6o_A Metacaspase-1; rossmann 27.9 1.2E+02 0.0042 28.3 6.8 57 132-190 71-139 (350)
460 3tla_A MCCF; serine protease, 27.8 1.9E+02 0.0064 27.3 8.2 72 176-247 40-128 (371)
461 2ehh_A DHDPS, dihydrodipicolin 27.7 3.3E+02 0.011 24.4 10.1 88 157-270 71-164 (294)
462 1mxh_A Pteridine reductase 2; 27.6 1.4E+02 0.0049 26.1 7.2 31 156-186 12-42 (276)
463 1wma_A Carbonyl reductase [NAD 27.6 1.6E+02 0.0054 25.4 7.5 66 156-226 5-74 (276)
464 2d59_A Hypothetical protein PH 27.5 1.1E+02 0.0037 24.3 5.7 44 218-272 91-134 (144)
465 1tks_A 3,4-dihydroxy-2-butanon 27.5 64 0.0022 27.7 4.3 36 228-267 159-194 (204)
466 2pd6_A Estradiol 17-beta-dehyd 27.4 2.3E+02 0.008 24.3 8.6 32 155-186 7-38 (264)
467 2ag5_A DHRS6, dehydrogenase/re 27.0 1E+02 0.0035 26.6 6.0 93 155-255 6-103 (246)
468 2h7i_A Enoyl-[acyl-carrier-pro 27.0 1.3E+02 0.0043 26.5 6.7 67 155-226 7-76 (269)
469 1yht_A DSPB; beta barrel, hydr 26.8 88 0.003 29.5 5.7 71 193-267 39-113 (367)
470 1qyd_A Pinoresinol-lariciresin 26.7 2.8E+02 0.0095 24.5 9.1 95 156-262 5-107 (313)
471 3s8m_A Enoyl-ACP reductase; ro 26.3 4.2E+02 0.014 25.3 10.5 66 155-225 61-142 (422)
472 1ofu_X SULA, hypothetical prot 26.3 2.2E+02 0.0076 21.8 10.1 99 157-264 6-112 (119)
473 3ek2_A Enoyl-(acyl-carrier-pro 26.3 1.2E+02 0.0041 26.4 6.4 98 153-256 12-127 (271)
474 2et6_A (3R)-hydroxyacyl-COA de 26.0 3.2E+02 0.011 27.5 10.2 92 156-256 323-425 (604)
475 2ekp_A 2-deoxy-D-gluconate 3-d 26.0 3E+02 0.01 23.3 8.9 91 157-255 4-99 (239)
476 2yxg_A DHDPS, dihydrodipicolin 25.8 3.6E+02 0.012 24.1 12.0 88 157-270 71-164 (289)
477 3kzv_A Uncharacterized oxidore 25.7 1.4E+02 0.0048 25.9 6.7 95 157-256 4-109 (254)
478 3icg_A Endoglucanase D; cellul 25.6 1.1E+02 0.0038 30.2 6.5 56 192-270 50-107 (515)
479 3flu_A DHDPS, dihydrodipicolin 25.6 3.7E+02 0.013 24.1 10.7 34 157-191 78-115 (297)
480 3vc3_A Beta-cyanoalnine syntha 25.5 91 0.0031 29.0 5.6 53 156-208 88-141 (344)
481 3zq4_A Ribonuclease J 1, RNAse 25.5 78 0.0027 31.7 5.4 92 157-260 293-406 (555)
482 3f7j_A YVGN protein; aldo-keto 25.3 3E+02 0.01 24.3 9.0 146 100-267 20-188 (276)
483 3i4f_A 3-oxoacyl-[acyl-carrier 25.0 1.9E+02 0.0067 24.9 7.6 95 156-255 8-116 (264)
484 1tlt_A Putative oxidoreductase 24.9 3.7E+02 0.013 24.0 10.1 26 245-271 100-125 (319)
485 3r6d_A NAD-dependent epimerase 24.8 1.8E+02 0.0061 24.3 7.0 91 157-260 7-98 (221)
486 2hfn_A Synechocystis photorece 24.7 55 0.0019 26.7 3.3 102 230-336 8-125 (153)
487 2ya0_A Putative alkaline amylo 24.5 44 0.0015 34.7 3.4 28 247-275 254-281 (714)
488 1hjs_A Beta-1,4-galactanase; 4 24.5 2.7E+02 0.0092 25.5 8.6 74 192-273 11-84 (332)
489 1xu9_A Corticosteroid 11-beta- 24.5 2.9E+02 0.01 24.2 8.8 75 156-235 29-113 (286)
490 3qp9_A Type I polyketide synth 24.3 2.1E+02 0.0072 28.3 8.3 99 153-256 248-372 (525)
491 1y81_A Conserved hypothetical 24.1 1E+02 0.0034 24.3 4.8 85 171-272 33-126 (138)
492 2yut_A Putative short-chain ox 24.1 1.9E+02 0.0065 23.7 7.0 90 158-256 3-96 (207)
493 3nco_A Endoglucanase fncel5A; 24.0 1.5E+02 0.005 26.9 6.7 18 192-209 46-63 (320)
494 3l21_A DHDPS, dihydrodipicolin 23.8 2E+02 0.0069 26.1 7.5 63 196-259 13-79 (304)
495 1g94_A Alpha-amylase; beta-alp 23.7 46 0.0016 32.2 3.2 30 246-276 63-92 (448)
496 4e5s_A MCCFLIKE protein (BA_56 23.7 2.7E+02 0.0094 25.6 8.4 71 176-246 9-96 (331)
497 3nrc_A Enoyl-[acyl-carrier-pro 23.7 2.4E+02 0.0081 24.8 7.9 98 154-256 25-138 (280)
498 3b3e_A YVGN protein; aldo-keto 23.6 3E+02 0.01 25.0 8.6 150 100-267 54-222 (310)
499 1lwj_A 4-alpha-glucanotransfer 23.5 56 0.0019 31.5 3.8 29 246-275 68-96 (441)
500 1oft_A SULA, hypothetical prot 23.4 3E+02 0.01 22.4 11.2 100 156-264 47-154 (161)
No 1
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=1.5e-51 Score=408.03 Aligned_cols=345 Identities=43% Similarity=0.721 Sum_probs=308.2
Q ss_pred CcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHh
Q 014172 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 147 (429)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~ 147 (429)
+++++..++++.+.++...+.++...++++|+|+.|+|++++|+.+.+++.+.+..+..+|++..|..+||+++++++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~ 83 (385)
T 1b5p_A 4 LSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRR 83 (385)
T ss_dssp CCHHHHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHH
T ss_pred hhhHHhhcCcchHHHHHHHHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 78889999999988888888887777788999999999998899999999998876667898888999999999999999
Q ss_pred hcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc
Q 014172 148 ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 227 (429)
Q Consensus 148 ~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~ 227 (429)
.+|..+++++|++|+|+++++.+++++++++||+|+++.|+|..|...++..|++++.+++++++++.+|+++|++++++
T Consensus 84 ~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 163 (385)
T 1b5p_A 84 ENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITP 163 (385)
T ss_dssp TTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCT
T ss_pred HhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCC
Confidence 88988889999999999999999999999999999999999999999999999999999997656788999999999988
Q ss_pred CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccc
Q 014172 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 307 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 307 (429)
++++|++++||||||.+++.+++++|+++|++| |++||+||+|.++.|++ ...++..+.. +++++++||||.+|++
T Consensus 164 ~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~-~~~~~~~~~~--~~~i~~~s~SK~~~~~ 239 (385)
T 1b5p_A 164 RTKALVVNSPNNPTGAVYPKEVLEALARLAVEH-DFYLVSDEIYEHLLYEG-EHFSPGRVAP--EHTLTVNGAAKAFAMT 239 (385)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTTTCBSSS-CCCCGGGTCT--TTEEEEEESTTTTTCG
T ss_pred CCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHc-CCEEEEEccchhcccCC-CCCCHHHcCC--CCEEEEEechhhcCCc
Confidence 899999999999999999999999999999999 99999999999998876 5556666643 7899999999999999
Q ss_pred cceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCC
Q 014172 308 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 387 (429)
Q Consensus 308 G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~ 387 (429)
|+|+||+++++++++.+.........+++.+.|.++.++|+......+++++.++.++++|+.+.+.|+++ |+++..|+
T Consensus 240 G~RiG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 318 (385)
T 1b5p_A 240 GWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLKAVRPS 318 (385)
T ss_dssp GGCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCCCS
T ss_pred ccceEEEEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCC
Confidence 99999999999999999888777777889999999999996300014678899999999999999999998 89988999
Q ss_pred ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 388 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++||+|++++.. + .+..+++++|+ ++||.+
T Consensus 319 ~~~~~~~~~~~~-~---------~~~~~l~~~l~-~~gv~v 348 (385)
T 1b5p_A 319 GAFYVLMDTSPI-A---------PDEVRAAERLL-EAGVAV 348 (385)
T ss_dssp BTTEEEEECTTT-C---------SSHHHHHHHHH-HTTEEC
T ss_pred eeEEEEEecCCC-C---------CCHHHHHHHHH-HCCeEE
Confidence 999999999732 1 26889999998 559976
No 2
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=1.5e-49 Score=393.48 Aligned_cols=347 Identities=45% Similarity=0.790 Sum_probs=310.0
Q ss_pred CcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHh
Q 014172 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 147 (429)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~ 147 (429)
++++++.++++.+..+...+++....|+++|+|+.|++++++|+.+.+++.+.+..+..+|++..|..++|+++++++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~ 82 (388)
T 1j32_A 3 LAARVESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQR 82 (388)
T ss_dssp CCHHHHTSCCCSSTTTHHHHHHHHTTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHH
T ss_pred hhhHhHhCCccHHHHHHHHHHHHHhcCCCEEECCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 67888888888888888888887777889999999999988899999999998876667898888999999999999999
Q ss_pred hcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc
Q 014172 148 ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 227 (429)
Q Consensus 148 ~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~ 227 (429)
.+|.++++++|++|+|+++++..++++++++||+|++++|+|+++...++..|++++.++++.++++.+|++.|++++++
T Consensus 83 ~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 162 (388)
T 1j32_A 83 DNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITP 162 (388)
T ss_dssp HHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCT
T ss_pred hcCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCc
Confidence 89987888999999999999999999999999999999999999999999999999999987655688999999999998
Q ss_pred CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCC-CCCceEEEeccChhccc
Q 014172 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG-MWERTLTVNGFSKAFAM 306 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~~ 306 (429)
++++|++++|+||||.+++.+++++|+++|++| |+++|+||+|.++.+++....++..+.. ..++++++.||||.+|+
T Consensus 163 ~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~ 241 (388)
T 1j32_A 163 KTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEA-GLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAM 241 (388)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTC
T ss_pred CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCC
Confidence 899999999999999999999999999999999 9999999999999887765556665542 14688999999999999
Q ss_pred ccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC
Q 014172 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (429)
Q Consensus 307 ~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p 386 (429)
+|+|+||+++++++++.+.......+.+++.+.|.++.++|+. ..++++++++.++++++++.+.|++++|+++..|
T Consensus 242 ~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 318 (388)
T 1j32_A 242 TGWRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYEN---SQDCVQEMLAAFAERRRYMLDALNAMPGLECPKP 318 (388)
T ss_dssp TTTCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHS---CSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCC
T ss_pred cccceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC---CcHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCC
Confidence 9999999999999999998877777778899999999999985 4678999999999999999999999889999889
Q ss_pred CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 387 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++++|+|++++.. + .+..+++++|++++||.+
T Consensus 319 ~~~~~~~~~~~~~-~---------~~~~~~~~~l~~~~gi~v 350 (388)
T 1j32_A 319 DGAFYMFPSIAKT-G---------RSSLDFCSELLDQHQVAT 350 (388)
T ss_dssp CBTTEECCBCGGG-T---------CCHHHHHHHHHHHHCEEC
T ss_pred CeeEEEEEecCCC-C---------CCHHHHHHHHHHhCCEEE
Confidence 9999999988641 1 267899999988669876
No 3
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=3.7e-49 Score=394.25 Aligned_cols=350 Identities=25% Similarity=0.405 Sum_probs=292.0
Q ss_pred ccCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHH
Q 014172 66 VSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHK 144 (429)
Q Consensus 66 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~ 144 (429)
|.+++++..++++.+..+...+.+....|+++|+|+.|++++++|+.+.+++.+.+... ...|++..|..++|++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~ 87 (412)
T 2x5d_A 8 ARRFARIDRLPPYVFNITAELKMAARRRGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHW 87 (412)
T ss_dssp -------------CHHHHHHHHHHHHHTTCCCEECSSCCCCSCCCHHHHHHHHHTC---------CTTCCHHHHHHHHHH
T ss_pred cchhHHHhhcCchHHHHHHHHHHHHhhcCCCEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHH
Confidence 33678888888888888877777777788899999999999888899999998877553 45798888999999999999
Q ss_pred HHhhcCCCCCC-CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHh
Q 014172 145 LKEENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLES 223 (429)
Q Consensus 145 l~~~~g~~~~~-~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~ 223 (429)
+.+.+|.++++ ++|++|+|+++++.+++++++++||+|+++.|+|+++...++..|++++.+++++++++.+|++.+++
T Consensus 88 ~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 167 (412)
T 2x5d_A 88 YRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIR 167 (412)
T ss_dssp HHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHH
T ss_pred HHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHH
Confidence 99888987788 79999999999999999999999999999999999999999999999999998765466689999999
Q ss_pred hcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChh
Q 014172 224 KLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKA 303 (429)
Q Consensus 224 ~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 303 (429)
++++++++|++++||||||.+++.+++++|+++|++| |++||+||+|..+.+++....++..+....++++++.||||.
T Consensus 168 ~i~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~ 246 (412)
T 2x5d_A 168 ESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQY-DVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKS 246 (412)
T ss_dssp TEESCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-C
T ss_pred hcccCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHc-CCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccc
Confidence 9988999999999999999999999999999999999 999999999999988765555666665445789999999999
Q ss_pred cccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCcee
Q 014172 304 FAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM 383 (429)
Q Consensus 304 ~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~ 383 (429)
+|++|+|+||+++++++++.+.......+.+.+.++|.++.++|+. .+++++++++.++++++++.+.|+++ |+++
T Consensus 247 ~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 322 (412)
T 2x5d_A 247 YNMAGWRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEG---DQQCVRDIARQYQQRRDVLVKGLREA-GWMV 322 (412)
T ss_dssp CSCTTSCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHS---CSHHHHHHHHHHHHHHHHHHHHHHHH-TCCC
T ss_pred cCCcccceEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHC-CCEe
Confidence 9999999999999999999998877766778899999999999986 46789999999999999999999988 8888
Q ss_pred ecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 384 SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 384 ~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+|++|+|+|++++...+ ..+..+++++|++++||.+
T Consensus 323 ~~~~~g~~~~~~~~~~~~--------~~~~~~~~~~l~~~~gi~v 359 (412)
T 2x5d_A 323 ENPKASMYVWAKIPEPYA--------HLGSLEFAKKLLQDAKVSV 359 (412)
T ss_dssp CCCSBSSEEEEECCTTTG--------GGCHHHHHHHHHHHHCEEC
T ss_pred cCCCeeeEEEEEcCCccC--------CCCHHHHHHHHHHHCCEEE
Confidence 889999999999974210 0157899999988779976
No 4
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=8.4e-49 Score=388.70 Aligned_cols=339 Identities=27% Similarity=0.418 Sum_probs=297.8
Q ss_pred cCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHH
Q 014172 67 SLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLK 146 (429)
Q Consensus 67 ~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~ 146 (429)
.++ +++.++++.+.++...++++...|+++|+|+.|++++++|+.+.+++.+.+.++...|++..|..++|+++++++.
T Consensus 4 ~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~ 82 (391)
T 3h14_A 4 KNS-SRSAVDPFIVMDVMEAARRAEEAGRRIIHMEVGQPGTGAPRGAVEALAKSLETDALGYTVALGLPALRQRIARLYG 82 (391)
T ss_dssp CCC-STTCCCCCTTHHHHHHHHHHHHTTCCCEECCCSSCSSCSCHHHHHHHHHHHC----------CCHHHHHHHHHHHH
T ss_pred hhh-hHhhcCcchHHHHHHHHHHHHhcCCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHH
Confidence 455 8899999999999999999988999999999999999999999999999887666789888899999999999999
Q ss_pred hhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 147 EENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 147 ~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
+.+|+++++++|++|+|+++++..++++++++||+|+++.|+|.++...++..|++++.+++++++++.+|+++++++
T Consensus 83 ~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~-- 160 (391)
T 3h14_A 83 EWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL-- 160 (391)
T ss_dssp HHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS--
T ss_pred HHhCCCCCHHHEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc--
Confidence 999988899999999999999999999999999999999999999999999999999999998777788999999887
Q ss_pred cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccc
Q 014172 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (429)
Q Consensus 227 ~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 306 (429)
++++|++++|+||||.+++.+++++|+++|++| |+++|+||+|.++.+++. ..++..+ .+++++++||||.+|+
T Consensus 161 -~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~~~-~~~~~~~---~~~~i~~~s~sK~~g~ 234 (391)
T 3h14_A 161 -DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQ-GASFISDEIYHGIEYEAK-AVTALEL---TDECYVINSFSKYFSM 234 (391)
T ss_dssp -CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTTTCBSSSC-CCCGGGT---CSSSEEEEESSSTTCC
T ss_pred -CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHc-CCEEEEECcchhcccCCC-CcChhhc---CCCEEEEEechhccCC
Confidence 789999999999999999999999999999999 999999999999988764 2333333 4788999999999999
Q ss_pred ccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC
Q 014172 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (429)
Q Consensus 307 ~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p 386 (429)
+|+|+||+++++++++.+......++.+++.+.|.++.+++.. .+++++.+++++++++.+.+.|++++...+..|
T Consensus 235 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 310 (391)
T 3h14_A 235 TGWRVGWMVVPEDQVRVVERIAQNMFICAPHASQVAALAALDC----DAELQANLDVYKANRKLMLERLPKAGFTRIAPP 310 (391)
T ss_dssp TTSCCEEEECCGGGHHHHHHHHHHTTCCCCHHHHHHHHHHTTC----HHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCC
T ss_pred ccceeEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhCC----hHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCC
Confidence 9999999999999999999888888888999999999888873 788999999999999999999998843444688
Q ss_pred CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 387 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++++|+|++++.. + .+..+++++|++++||.+
T Consensus 311 ~~~~~~~~~~~~~-~---------~~~~~~~~~l~~~~gi~v 342 (391)
T 3h14_A 311 DGAFYVYADVSDL-T---------DDSRAFAAEILEKAGVAV 342 (391)
T ss_dssp CBTTEEEEECTTT-C---------SCHHHHHHHHHHHHCEEC
T ss_pred CeeEEEEEecCcc-C---------CCHHHHHHHHHHHCCEEE
Confidence 9999999999752 0 378899999998889986
No 5
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-49 Score=401.02 Aligned_cols=350 Identities=23% Similarity=0.425 Sum_probs=297.4
Q ss_pred cCCchhHHHHHHHHHH----HhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHHhhc
Q 014172 75 VKPSKTVAITDQATAL----AQAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEEN 149 (429)
Q Consensus 75 ~~~~~~~~~~~~~~~~----~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~ 149 (429)
++++.+..+...+..+ +..++++|+|+.|.|++++|+.+.+++.+++.+ +..+|++..|..+||+++++++.+.+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~ 112 (447)
T 3b46_A 33 TAKDVWSLTNEAAAKAANNSKNQGRELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIY 112 (447)
T ss_dssp CCCCHHHHHHHHHHHHCCC---TTSCCEECCCCSCSSCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTT
T ss_pred cCccHHHHHHHHHHhhccchhccCCCeEEccCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhc
Confidence 6778777777766554 235678999999999999999999999998865 45689888899999999999999888
Q ss_pred CCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCC----------CCCCCHH
Q 014172 150 GLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISE----------NFLLDPK 219 (429)
Q Consensus 150 g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~----------~~~~d~e 219 (429)
|..+++++|++|+|+++++..++++++++||+|++++|+|..|...++..|++++.+++++++ +|.+|++
T Consensus 113 g~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~ 192 (447)
T 3b46_A 113 NTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFE 192 (447)
T ss_dssp TSCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHH
T ss_pred CCCCChhhEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHH
Confidence 888888999999999999999999999999999999999999999999999999999986543 5789999
Q ss_pred HHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccC-CCCCCceEEEe
Q 014172 220 VLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL-PGMWERTLTVN 298 (429)
Q Consensus 220 ~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~-~~~~~~~i~~~ 298 (429)
+|++++++++++|++++||||||.+++.+++++|+++|++| |++||+||+|.++.|++ .+.++..+ .+..++++++.
T Consensus 193 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~-~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~~i~i~ 270 (447)
T 3b46_A 193 QFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGNICVKH-NVVIISDEVYEHLYFTD-SFTRIATLSPEIGQLTLTVG 270 (447)
T ss_dssp HHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTTTCBCSS-CCCCGGGSCHHHHTTEEEEE
T ss_pred HHHHhhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHc-CcEEEEeccchhcccCC-CCcCHHHcCCCCCCcEEEEe
Confidence 99999998999999999999999999999999999999999 99999999999998876 34455555 22357899999
Q ss_pred ccChhcccccceeeEEEc-CHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 014172 299 GFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 377 (429)
Q Consensus 299 S~SK~~~~~G~R~G~v~~-~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 377 (429)
||||.++++|||+||+++ ++++++.+........++.+.+.|.++.++|+... .+++++++++.++++++++.+.|++
T Consensus 271 S~sK~~~~~G~riG~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~ 349 (447)
T 3b46_A 271 SAGKSFAATGWRIGWVLSLNAELLSYAAKAHTRICFASPSPLQEACANSINDAL-KIGYFEKMRQEYINKFKIFTSIFDE 349 (447)
T ss_dssp EHHHHTTCTTSCCEEEECSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCchhcCCcchhhEEEEeCCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCc-chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 99999999887666677789999999999998621 1567889999999999999999999
Q ss_pred CCCceeecCCceEEEEEecCCccCCccc----CCCCCCChHHHHHHHHHhCCeec
Q 014172 378 LEGVKMSEPQGAFYLFIDFSTYYGSEAE----GFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 378 l~g~~~~~p~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+ |+++..|++|+|+|++++....+... ..+...++.+++++|++++||.+
T Consensus 350 ~-g~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v 403 (447)
T 3b46_A 350 L-GLPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVA 403 (447)
T ss_dssp H-TCCEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEEC
T ss_pred C-CCeecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEE
Confidence 8 88888899999999999752000000 00001256789999998789986
No 6
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=1.9e-48 Score=385.74 Aligned_cols=343 Identities=43% Similarity=0.673 Sum_probs=302.1
Q ss_pred cCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHH
Q 014172 67 SLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLK 146 (429)
Q Consensus 67 ~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~ 146 (429)
.+++++..++++.+.++.+.+++. +++|+|+.|++++++|+.+.+++.+.+......|++..|..++|+++++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~ 77 (389)
T 1gd9_A 2 ALSDRLELVSASEIRKLFDIAAGM----KDVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLK 77 (389)
T ss_dssp CHHHHHHHSCCCHHHHHHHHHHTC----SSCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHH
T ss_pred chhhHhHhCChhHHHHHHHHHhhh----cCeEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHH
Confidence 467888888988877776665432 4689999999998888999999999987766789888899999999999999
Q ss_pred hhcCCCCCCCc-EEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhc
Q 014172 147 EENGLSYTPDQ-ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL 225 (429)
Q Consensus 147 ~~~g~~~~~~~-i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l 225 (429)
+.+|.++++++ |++|+|+++++..++++++++||+|++++|+|+++...++..|++++.+|+++++++.+|++.|++++
T Consensus 78 ~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l 157 (389)
T 1gd9_A 78 KQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYV 157 (389)
T ss_dssp HHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHC
T ss_pred HHhCCCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhc
Confidence 88897778889 99999999999999999999999999999999999999999999999999876556789999999999
Q ss_pred ccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcc
Q 014172 226 TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 305 (429)
Q Consensus 226 ~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 305 (429)
++++++|++++||||||.+++.+++++|+++|++| |+++|+||+|.++.+++....++..+.+..++++++.||||.+|
T Consensus 158 ~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 236 (389)
T 1gd9_A 158 TDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEH-DLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFA 236 (389)
T ss_dssp CTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTT
T ss_pred CcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcC
Confidence 88899999999999999999999999999999999 99999999999998876545566666544578999999999999
Q ss_pred cccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChH--HHHHHHHHHHHHHHHHHHHhccCCCcee
Q 014172 306 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGE--VVSKMVKAFRERRDFLVKSFGELEGVKM 383 (429)
Q Consensus 306 ~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~--~~~~~~~~~~~~r~~l~~~L~~l~g~~~ 383 (429)
++|+|+||+++++++++.+.........+++.+.|.++.++|+. ..+ +++++++.++++++++.+.|+++ |+++
T Consensus 237 ~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 312 (389)
T 1gd9_A 237 MTGWRLGFVAAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKD---ERSWKAVEEMRKEYDRRRKLVWKRLNEM-GLPT 312 (389)
T ss_dssp CGGGCCEEEECCHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCC
T ss_pred CcccceEEEEECHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhC---CCcchHHHHHHHHHHHHHHHHHHHHHHc-CCee
Confidence 99999999999999999998877766778899999999999985 344 78999999999999999999998 8988
Q ss_pred ecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 384 SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 384 ~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
..|++++|+|++++.. + .+..+++++|++++||.+
T Consensus 313 ~~~~~~~~~~~~~~~~-~---------~~~~~~~~~l~~~~gi~v 347 (389)
T 1gd9_A 313 VKPKGAFYIFPRIRDT-G---------LTSKKFSELMLKEARVAV 347 (389)
T ss_dssp CCCCBTTEECCBCGGG-T---------CCHHHHHHHHHHHTCEEC
T ss_pred cCCCeeeEEEEeccCC-C---------CCHHHHHHHHHHhCCEEE
Confidence 8899999999998741 0 267899999986679976
No 7
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=2.7e-48 Score=388.76 Aligned_cols=355 Identities=28% Similarity=0.513 Sum_probs=307.0
Q ss_pred ccCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCC--CCCCCCCCCHHHHHHHHH
Q 014172 66 VSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGF--TRYTPNAGTLELRSAICH 143 (429)
Q Consensus 66 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~--~~Y~~~~G~~~lr~~ia~ 143 (429)
+.+++++..++++.+.++.+.+. ++++|+|+.|+|++++|+.+.+++.+.+.++. .+|++..|..++|+++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~ 78 (422)
T 3fvs_A 4 QLQARRLDGIDYNPWVEFVKLAS-----EHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILAS 78 (422)
T ss_dssp CCSCGGGTTCCCCHHHHHHHHHH-----TSCCEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHH
T ss_pred hhHHHHhhccCccHHHHHHHHhh-----cCCceEeCCCCCCCCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHH
Confidence 34788999999998777665443 35799999999999999999999999987653 689888899999999999
Q ss_pred HHHhhcCCCCCC-CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCC----------CC
Q 014172 144 KLKEENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRI----------SE 212 (429)
Q Consensus 144 ~l~~~~g~~~~~-~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~----------~~ 212 (429)
++.+.+|.++++ ++|++|+|+++++..++.+++++||+|+++.|+|.++...++..|++++.+++++ ++
T Consensus 79 ~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~ 158 (422)
T 3fvs_A 79 FFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSS 158 (422)
T ss_dssp HHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBGG
T ss_pred HHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEeccccccccccccccc
Confidence 999999988888 7999999999999999999999999999999999999999999999999999875 23
Q ss_pred CCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCC
Q 014172 213 NFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 292 (429)
Q Consensus 213 ~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~ 292 (429)
+|.+|++.+++++++++++|++++||||||.+++.+++++|+++|++| |+++|+||+|.++.|++..+.++..+....+
T Consensus 159 ~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 237 (422)
T 3fvs_A 159 NWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQH-DVVCITDEVYQWMVYDGHQHISIASLPGMWE 237 (422)
T ss_dssp GSBCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTTTCBCTTCCCCCGGGSTTTGG
T ss_pred CCCCCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHc-CcEEEEEccchhhccCCCCCCChhhcccccC
Confidence 577999999999999999999999999999999999999999999999 9999999999999998877777777766678
Q ss_pred ceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhc-----CCCChHHHHHHHHHHHHH
Q 014172 293 RTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL-----GYAGGEVVSKMVKAFRER 367 (429)
Q Consensus 293 ~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~-----~~~~~~~~~~~~~~~~~~ 367 (429)
+++++.||||.+|++|+|+||+++++++++.+.........+.+.+.|.++.++|+. +. ..++++++++.++++
T Consensus 238 ~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~ 316 (422)
T 3fvs_A 238 RTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQ-PSSYFVQFPQAMQRC 316 (422)
T ss_dssp GEEEEEEHHHHHTCGGGCCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTC-TTCHHHHHHHHHHHH
T ss_pred cEEEEecchhccCCccceEEEEEeCHHHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccc-hHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998887767778899999999999874 22 257889999999999
Q ss_pred HHHHHHHhccCCCceeecCCceEEEEEecCCccCCcc--cCCCCCCChHHHHHHHHHhCCeec
Q 014172 368 RDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEA--EGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 368 r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++.+.+.|+++ |+++..|++++|+|++++....... .+........+++.+|++++||.+
T Consensus 317 ~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v 378 (422)
T 3fvs_A 317 RDHMIRSLQSV-GLKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVA 378 (422)
T ss_dssp HHHHHHHHHTT-TCEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEEC
T ss_pred HHHHHHHHHHc-CCeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEE
Confidence 99999999998 9998899999999999864210000 000000006689999998889976
No 8
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=4.1e-49 Score=392.40 Aligned_cols=339 Identities=12% Similarity=0.104 Sum_probs=271.0
Q ss_pred CcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCC---C--CCChHHHHHHHHHHH-H-cCCCCCCCCCCCHHHHHH
Q 014172 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP---D--FDTPVLIAEAGINAI-R-EGFTRYTPNAGTLELRSA 140 (429)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~---~--~~~p~~v~~a~~~~~-~-~~~~~Y~~~~G~~~lr~~ 140 (429)
+..++..++++.+..+.+.++.. ..+++|+|+.|.+ + +.+++.+.++.. .+ . ...++|++..|.++||++
T Consensus 4 ~~~~~~~~~~~~i~~~~~~~~~~--~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~a 80 (405)
T 3k7y_A 4 LLSSLENIEVDNILKTAREFKED--TCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTL 80 (405)
T ss_dssp GGGGCCCCCCCHHHHHHHHHTTS--SCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHH
T ss_pred hhhcCCCCCCChHHHHHHHHhcC--CCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHH
Confidence 56788889999877776666542 2357999999973 2 345688888876 43 3 346789999999999999
Q ss_pred HHHHHHhhcCCCCCCCc--EEEecChHHHHHHHHHHhcC--CCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCC
Q 014172 141 ICHKLKEENGLSYTPDQ--ILVSNGAKQSILQAVLAVCS--PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLL 216 (429)
Q Consensus 141 ia~~l~~~~g~~~~~~~--i~~t~G~~~al~~~l~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 216 (429)
+++|+.+.++..+++++ +++|+|+++++.+++.++++ + |+|++++|+|+.|...++..|++++.+|+..++++.+
T Consensus 81 ia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 159 (405)
T 3k7y_A 81 TQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDI 159 (405)
T ss_dssp HHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEE
T ss_pred HHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCc
Confidence 99999777766666764 59999999999999999987 8 9999999999999999999999999999855556889
Q ss_pred CHHHHHhhccc--CCcEEEEcCC-CCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCC--CCccccCCCCC
Q 014172 217 DPKVLESKLTE--KSRLLILCSP-SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT--HTSFASLPGMW 291 (429)
Q Consensus 217 d~e~l~~~l~~--~~~~i~l~~p-~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~--~~~~~~~~~~~ 291 (429)
|++.+++.+++ +++++++++| |||||.+++.+++++|+++|++| +++||+||+|.++.|++.. ..++..+....
T Consensus 160 d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~-~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~ 238 (405)
T 3k7y_A 160 NYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHK-KHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKN 238 (405)
T ss_dssp CHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHH-CCEEEEEESCTTTSSSSTTGGGHHHHHHHTTT
T ss_pred CHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHC-CeEEEEecCcccccCCCcccchHHHHHHHhcC
Confidence 99999999863 5678888765 89999999999999999999999 9999999999999886421 22333333335
Q ss_pred CceEEEeccChhcccccceeeEEEc---CHHHHHHHH----HHhhcccCCCchHHHHHHHHHHhcCCCC---hHHHHHHH
Q 014172 292 ERTLTVNGFSKAFAMTGWRLGYIAG---PKHFVAACN----KIQSQFTSGASSISQKAGVAALGLGYAG---GEVVSKMV 361 (429)
Q Consensus 292 ~~~i~~~S~SK~~~~~G~R~G~v~~---~~~~~~~l~----~~~~~~~~~~~~~~q~aa~~~l~~~~~~---~~~~~~~~ 361 (429)
+++|+++||||.|+|+|||+||+++ ++++++.+. ...+...++++.++|.++..+|.++... .++++.++
T Consensus 239 ~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~ 318 (405)
T 3k7y_A 239 IAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLS 318 (405)
T ss_dssp CCEEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CcEEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 7999999999999999999999853 666665543 3334455567889999999988752111 23466778
Q ss_pred HHHHHHHHHHHHHhc----cCC---CceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 362 KAFRERRDFLVKSFG----ELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 362 ~~~~~~r~~l~~~L~----~l~---g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++|+++|+.+.+.|+ ++. ++++.+|+||||+|++++. +++++| +++||++
T Consensus 319 ~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l~~----------------~~~~~L-~~~gV~v 375 (405)
T 3k7y_A 319 QRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLA----------------KIAEHL-KTHHIYI 375 (405)
T ss_dssp HHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEECGGGG----------------GGTTTT-TTTTEEC
T ss_pred HHHHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEEEecCCCH----------------HHHHHH-HHCCEee
Confidence 889999999999999 762 2688899999999998752 445677 7778875
No 9
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=9.9e-48 Score=381.09 Aligned_cols=340 Identities=37% Similarity=0.667 Sum_probs=302.5
Q ss_pred cCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHH
Q 014172 67 SLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLK 146 (429)
Q Consensus 67 ~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~ 146 (429)
..+++++.++++.+.++...+.+....|+++|+|+.|++++++|+.+.+++.+.+......|++..|..++|+++++++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~ 92 (389)
T 1o4s_A 13 MVSRRISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIG 92 (389)
T ss_dssp -CCHHHHHSCCCSSHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCccHHHHHHHHHHHHHhcCCCEEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 36788889999999898888888777788999999999988888999999999887656689887899999999999999
Q ss_pred hhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 147 EENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 147 ~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
+.+|.++++++|++|+|+++++..++++++++||+|++++|+|.++...++..|++++.+|+++++++.+|+++|+++++
T Consensus 93 ~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 172 (389)
T 1o4s_A 93 ERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLV 172 (389)
T ss_dssp HHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCC
T ss_pred HHhCCCCCHHHEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcc
Confidence 88898778899999999999999999999999999999999999999999999999999998765568899999999998
Q ss_pred cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccc
Q 014172 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (429)
Q Consensus 227 ~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 306 (429)
+++++|++++|+||||.+++.+++++|+++|++| |+++|+||+|.++.+++ ...++..+....++++++.||||.+|+
T Consensus 173 ~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~Dea~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~~~ 250 (389)
T 1o4s_A 173 GKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKR-NFYIISDEVYDSLVYTD-EFTSILDVSEGFDRIVYINGFSKSHSM 250 (389)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTTTSBCSS-CCCCHHHHCSSSTTEEEEEESTTTTTC
T ss_pred cCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHc-CCEEEEEccccccccCC-CCCCHhhcCCCCCcEEEEeechhhcCC
Confidence 8899999999999999999999999999999999 99999999999988865 334555554335789999999999999
Q ss_pred ccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC
Q 014172 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (429)
Q Consensus 307 ~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p 386 (429)
+|+|+||+++++++++.+.........+++.+.|.++.++|+. . ++++++.++++++++.+.|+++ |+++..|
T Consensus 251 ~G~r~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~---~---~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 323 (389)
T 1o4s_A 251 TGWRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEV---D---NSYMVQTFKERKNFVVERLKKM-GVKFVEP 323 (389)
T ss_dssp GGGCCEEEECCHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTC---C---CHHHHHHHHHHHHHHHHHHHHT-TCCCCCC
T ss_pred cccceEEEEeCHHHHHHHHHHhhhcccCCCHHHHHHHHHHHhc---c---HHHHHHHHHHHHHHHHHHHHhc-CCeeecC
Confidence 9999999999999999998877766677899999999998876 2 6678889999999999999998 8888889
Q ss_pred CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 387 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++++|+|++++ . +..+++++|++++||.+
T Consensus 324 ~~~~~~~~~~~-~------------~~~~l~~~l~~~~gi~v 352 (389)
T 1o4s_A 324 EGAFYLFFKVR-G------------DDVKFCERLLEEKKVAL 352 (389)
T ss_dssp SBSSEEEEECS-S------------CHHHHHHHHHHHHCEEC
T ss_pred CcceEEEEeCC-C------------CHHHHHHHHHHHCCEEE
Confidence 99999999986 2 67899999986669876
No 10
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=3.4e-47 Score=376.50 Aligned_cols=341 Identities=27% Similarity=0.473 Sum_probs=297.5
Q ss_pred CcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHh
Q 014172 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 147 (429)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~ 147 (429)
.++++..+.++.+..+...... .++|+|+.|.+++++|+.+.+++.+.+..+...|++..|..++|+++++++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~-----~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~ 82 (386)
T 1u08_A 8 PQSKLPQLGTTIFTQMSALAQQ-----HQAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTER 82 (386)
T ss_dssp CCCSCCCCCCCHHHHHHHHHHH-----TTCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHH
T ss_pred cchhhhcCCccHHHHHHHHHhc-----CCeEEecCCCCCCCCCHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHH
Confidence 4677888887766555443321 35899999999988889999999999876567898888999999999999999
Q ss_pred hcCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 148 ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 148 ~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
.+|.+++++ +|++|+|+++++..++++++++||+|++++|+|+++...++..|++++.++++.+ ++.+|+++|+++++
T Consensus 83 ~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~ 161 (386)
T 1u08_A 83 LYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPP-HFRVDWQEFAALLS 161 (386)
T ss_dssp HHSCCCCTTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTT-TCCCCHHHHHHHCC
T ss_pred HhCCCCCCCCCEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcc-cCcCCHHHHHHhhc
Confidence 889878888 9999999999999999999999999999999999999999999999999998653 47799999999998
Q ss_pred cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccc
Q 014172 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (429)
Q Consensus 227 ~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 306 (429)
+++++|++++|+||||.+++.+++++|+++|++| |++||+||+|.++.|++..+.++..+....++++++.||||.+|+
T Consensus 162 ~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 240 (386)
T 1u08_A 162 ERTRLVILNTPHNPSATVWQQADFAALWQAIAGH-EIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHM 240 (386)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTS-CCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTC
T ss_pred ccCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHc-CcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCC
Confidence 8899999999999999999999999999999999 999999999999988775555665553235789999999999999
Q ss_pred ccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC
Q 014172 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (429)
Q Consensus 307 ~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p 386 (429)
+|+|+||+++++++++.+.........+.+.+.|.++..+|+. .++++++++++++++++++.+.|+++ |+++..|
T Consensus 241 ~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 316 (386)
T 1u08_A 241 TGWKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRA---EPEHYLALPDFYRQKRDILVNALNES-RLEILPC 316 (386)
T ss_dssp GGGCCEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHH---CTHHHHTHHHHHHHHHHHHHHHTTSS-SCEECCC
T ss_pred cccceEEEEcCHHHHHHHHHHHHhhccCCChHHHHHHHHHHhC---CcHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCC
Confidence 9999999999999999988776656667889999999999986 36789999999999999999999998 8998889
Q ss_pred CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 387 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++|+|+|++++... ..+..+++++|++++||.+
T Consensus 317 ~~g~~~~~~~~~~~---------~~~~~~~~~~l~~~~gi~v 349 (386)
T 1u08_A 317 EGTYFLLVDYSAVS---------TLDDVEFCQWLTQEHGVAA 349 (386)
T ss_dssp CBSSEEEEECTTTC---------CSCHHHHHHHHHHHSCEEC
T ss_pred CceEEEEEecCCCC---------CCCHHHHHHHHHHhCCEEE
Confidence 99999999997520 0257899999988789986
No 11
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.1e-47 Score=381.45 Aligned_cols=343 Identities=31% Similarity=0.541 Sum_probs=300.0
Q ss_pred cCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHH
Q 014172 67 SLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLK 146 (429)
Q Consensus 67 ~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~ 146 (429)
++++++..++++.+..+..... ..+.|+|+.|.+++++|+.+.+++.+.+.++...|++..|..+||+++++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~ 76 (411)
T 2o0r_A 2 ATVSRLRPYATTVFAEMSALAT-----RIGAVNLGQGFPDEDGPPKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRR 76 (411)
T ss_dssp CCCGGGGGGSSCHHHHHHHHHH-----TTTCEESSCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHH
T ss_pred chhhHhHhcCccHHHHHHHHhh-----cCCeeeccCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 4678888888887666554332 23589999999998888999999999987656789888899999999999999
Q ss_pred hhcCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCC-CCCCCCHHHHHhh
Q 014172 147 EENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRIS-ENFLLDPKVLESK 224 (429)
Q Consensus 147 ~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~e~l~~~ 224 (429)
+.+|.+++++ +|++|+|+++++..++++++++||+|++++|+|.++...++..|++++.+|++.+ +++.+|++.|+++
T Consensus 77 ~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~ 156 (411)
T 2o0r_A 77 RHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRA 156 (411)
T ss_dssp HHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHH
T ss_pred HHcCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHh
Confidence 9889877888 9999999999999999999999999999999999999999999999999998654 3467899999999
Q ss_pred cccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhc
Q 014172 225 LTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF 304 (429)
Q Consensus 225 l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 304 (429)
+++++++|++++|+||||.+++.+++++|+++|++| |+++|+||+|.++.|++....++..+....++++++.||||.+
T Consensus 157 l~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~ 235 (411)
T 2o0r_A 157 VTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAA-NLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMF 235 (411)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHT
T ss_pred hccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHc-CCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhc
Confidence 998899999999999999999999999999999999 9999999999999887765566666654467899999999999
Q ss_pred ccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceee
Q 014172 305 AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (429)
Q Consensus 305 ~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~ 384 (429)
|++|+|+||+++++++++.+........++.+.+.|.++.++|+. .+++++++++.++++++++.+.|+++ |+++.
T Consensus 236 ~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 311 (411)
T 2o0r_A 236 NCTGWKIGWACGPAELIAGVRAAKQYLSYVGGAPFQPAVALALDT---EDAWVAALRNSLRARRDRLAAGLTEI-GFAVH 311 (411)
T ss_dssp TCTTTCEEEEECCHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEC
T ss_pred CCccceEEEEeeCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHHHc-CCEec
Confidence 999999999999999999988776655667788899999999986 47889999999999999999999988 89988
Q ss_pred cCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 385 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 385 ~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.|++|+|+|++++... ..+..+++++|++++||.+
T Consensus 312 ~~~~g~~~~~~~~~~~---------~~~~~~~~~~l~~~~gi~v 346 (411)
T 2o0r_A 312 DSYGTYFLCADPRPLG---------YDDSTEFCAALPEKVGVAA 346 (411)
T ss_dssp CCCBSSEEEEECGGGT---------CCCHHHHHHHHHHHHSEEC
T ss_pred CCCeeEEEEEecCCCC---------CCCHHHHHHHHHHhCCEEE
Confidence 8999999999997520 0257899999987779876
No 12
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=1.5e-47 Score=386.86 Aligned_cols=340 Identities=19% Similarity=0.345 Sum_probs=296.9
Q ss_pred ccccCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCC--ChHHHHHHHHHHHHcC---CCCCCCCCCCHHHH
Q 014172 64 VDVSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFD--TPVLIAEAGINAIREG---FTRYTPNAGTLELR 138 (429)
Q Consensus 64 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~--~p~~v~~a~~~~~~~~---~~~Y~~~~G~~~lr 138 (429)
|+..++++.++++++.++.+..... ++++|+|+.|.|+.. +++.+.+++.+.+.+. ..+|++..|..+||
T Consensus 50 ~~~~~s~~~~~~~~s~~~~~~~~~~-----~~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr 124 (448)
T 3aow_A 50 VERFFSKKALEMRASEVRELLKLVE-----TSDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLR 124 (448)
T ss_dssp GGGGCCHHHHHCCCCHHHHHHHHHH-----TSSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHH
T ss_pred hHHHhhHHHhcCCCcHHHHHHHhcc-----CCCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHH
Confidence 6666899999999998777655432 356999999998755 5788999998888653 36898889999999
Q ss_pred HHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCH
Q 014172 139 SAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDP 218 (429)
Q Consensus 139 ~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 218 (429)
+++++++.+.+|.+ ++++|++|+|+++++..++++++++||+|+++.|+|.++...++..|++++.+|++++ .+|+
T Consensus 125 ~~ia~~~~~~~g~~-~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~ 200 (448)
T 3aow_A 125 ETLMKWLGKRYGIS-QDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDE---GMKV 200 (448)
T ss_dssp HHHHHHHHHHHCCC-TTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT---EECH
T ss_pred HHHHHHHHHhcCcC-ChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCC---CCCH
Confidence 99999998888976 7899999999999999999999999999999999999999999999999999998643 3899
Q ss_pred HHHHhhcc----c--CCcEEE-EcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCC
Q 014172 219 KVLESKLT----E--KSRLLI-LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 291 (429)
Q Consensus 219 e~l~~~l~----~--~~~~i~-l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~ 291 (429)
+.|+++++ + ++++|+ +++|+||||.+++.+++++|+++|++| |++||+||+|.++.|++....++..++. .
T Consensus 201 ~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~-~~~lI~De~y~~~~~~g~~~~~~~~~~~-~ 278 (448)
T 3aow_A 201 EILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEY-DFIVVEDDPYGELRYSGNPEKKIKALDN-E 278 (448)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECSCTTCBCSSCCCCCTGGGCT-T
T ss_pred HHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHc-CCEEEEECCCccccCCCCCCcCHHhcCC-C
Confidence 99999987 5 789985 699999999999999999999999999 9999999999999987765667766643 5
Q ss_pred CceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHH
Q 014172 292 ERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 371 (429)
Q Consensus 292 ~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l 371 (429)
+++++++||||.++ +|+|+||+++++++++.+.......+.+++.++|.++.++|+.+. ..++++++++.|+++++.+
T Consensus 279 ~~vi~~~S~SK~~~-~GlriG~v~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~-~~~~~~~~~~~~~~~~~~l 356 (448)
T 3aow_A 279 GRVIYLGTFSKILA-PGFRIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGY-LEKHIPEIRKFYKPRRDAM 356 (448)
T ss_dssp SCEEEEEESTTTTC-GGGCCEEEEECHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTH-HHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEccchhhcc-ccccEEEEEeCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHH
Confidence 78999999999999 999999999999999999887777777889999999999998631 1578899999999999999
Q ss_pred HHHhcc-CC-CceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 372 VKSFGE-LE-GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 372 ~~~L~~-l~-g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+.|++ +| |+++..|.+|+|+|++++.. .+..+++++|+++ ||.+
T Consensus 357 ~~~L~~~~~~g~~~~~p~~g~~~~v~~~~~-----------~~~~~l~~~l~~~-gV~v 403 (448)
T 3aow_A 357 LEALEEFMPEGVKWTKPEGGMFIWVTLPDG-----------IDSKKMLERAIKK-GVAY 403 (448)
T ss_dssp HHHHHHHCCTTCEECCCSBSSEEEEECSTT-----------CCHHHHHHHHHHT-TEEC
T ss_pred HHHHHHhCCCCeEEeCCCccEEEEEEcCCC-----------CCHHHHHHHHHHC-CcEE
Confidence 999987 67 69998899999999999753 3688999999988 9976
No 13
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=9.4e-48 Score=383.29 Aligned_cols=345 Identities=32% Similarity=0.538 Sum_probs=298.2
Q ss_pred ccCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCC---CCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Q 014172 66 VSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP---DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAIC 142 (429)
Q Consensus 66 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~---~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia 142 (429)
+.+++++++++++.+..+. .++++...|+++|+|+.|.+ +++.|+.+.+++.+.+......|++..|..++|++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la 88 (406)
T 1xi9_A 10 IRASKRALSVEYAIRDVVL-PARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIV 88 (406)
T ss_dssp CCCCHHHHTCCC--------CHHHHHHTTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHH
T ss_pred hhHHHHHhcCChhHHHHHH-HHHHHHHcCCCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHH
Confidence 4678899999999888888 88888888889999999999 7888899999999988766567988889999999999
Q ss_pred HHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHH
Q 014172 143 HKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLE 222 (429)
Q Consensus 143 ~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~ 222 (429)
+++.+.+|+++++++|++|+|+++++..++++++++||+|++++|+|.++...++..|++++.+|+++++++.+|++.|+
T Consensus 89 ~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~ 168 (406)
T 1xi9_A 89 EREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIR 168 (406)
T ss_dssp HHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHH
T ss_pred HHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHH
Confidence 99999999888889999999999999999999999999999999999999999999999999999876456788999999
Q ss_pred hhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCc-eEEEeccC
Q 014172 223 SKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER-TLTVNGFS 301 (429)
Q Consensus 223 ~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~-~i~~~S~S 301 (429)
+.+++++++|++++|+||||.+++.+++++|+++|++| |++||+||+|.++.+++ ...++..++ .++ +++++|||
T Consensus 169 ~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~-~~~li~De~~~~~~~~~-~~~~~~~~~--~~~~~i~~~s~s 244 (406)
T 1xi9_A 169 KKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEY-EIPVISDEIYDLMTYEG-EHISPGSLT--KDVPVIVMNGLS 244 (406)
T ss_dssp HHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCCEEEECTTTTCBSSS-CCCCHHHHC--SSSCEEEEEEST
T ss_pred HhhCcCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHc-CCEEEEEcCccccccCC-CCCCHHHcC--CCceEEEEeccc
Confidence 99998899999999999999999999999999999999 99999999999988843 334555553 577 89999999
Q ss_pred hhcccccceeeEEE--cCH----HHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHh
Q 014172 302 KAFAMTGWRLGYIA--GPK----HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSF 375 (429)
Q Consensus 302 K~~~~~G~R~G~v~--~~~----~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L 375 (429)
|.++++|+|+||++ +++ ++++.+....... .+++.+.|.++.++|+. ..++++++++.++++++++.+.|
T Consensus 245 K~~~~~G~r~G~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L 320 (406)
T 1xi9_A 245 KVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIR-LCPNTPAQFAAIAGLTG---PMDYLKEYMKKLKERRDYIYKRL 320 (406)
T ss_dssp TTTCCGGGCCEEEEEECTTCTTHHHHHHHHHHHHHT-CCSCSHHHHHHHHHHHS---CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCccEEEEEEEecCchhHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHhC---CcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 998 9999988776554 67889999999999975 35678899999999999999999
Q ss_pred ccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 376 GELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 376 ~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+++||+++..|++++|+|++++...+ .+..+++++|++++||.+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~l~~~l~~~~gi~v 364 (406)
T 1xi9_A 321 NEIPGISTTKPQGAFYIFPKIEVGPW---------KNDKEFVLDVLHNAHVLF 364 (406)
T ss_dssp HTSTTEECCCCCBSSEECCEECSCSC---------SSHHHHHHHHHHHHCEEC
T ss_pred HhCCCCeeecCCeeEEEEEecCccCC---------CCHHHHHHHHHHhCCEEE
Confidence 99889998889999999998874101 267899999986669975
No 14
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=7.6e-48 Score=382.14 Aligned_cols=339 Identities=22% Similarity=0.361 Sum_probs=295.9
Q ss_pred cccccccCCchhHHHHHHHHHHH-hcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHh
Q 014172 69 SPRVNAVKPSKTVAITDQATALA-QAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 147 (429)
Q Consensus 69 s~~~~~~~~~~~~~~~~~~~~~~-~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~ 147 (429)
+++++.++++++..+......+. ..|+++|+|+.|++++++|+.+.+++.+.+. ...+|++..|..++|+++++++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~-~~~~y~~~~g~~~lr~~la~~l~~ 81 (396)
T 3jtx_A 3 NTLLKQLKPYPFARLHEAMQGISAPEGMEAVPLHIGEPKHPTPKVITDALTASLH-ELEKYPLTAGLPELRQACANWLKR 81 (396)
T ss_dssp HHHHHHCCSCHHHHHHHHTTTCCCCTTCCCEECSCCSCCSCCCHHHHHHHHHTGG-GGGSCCCTTCCHHHHHHHHHHHHH
T ss_pred hhhhccCCCChHHHHHHHHHhhhhccCCCeEEeCCcCCCCCCCHHHHHHHHHHhh-hccCCCCCCCcHHHHHHHHHHHHH
Confidence 45677788888777766554433 3577899999999999999999999998875 457898888999999999999999
Q ss_pred hcCCC-CCCC-cEEEecChHHHHHHHHHHhcCCC-----CEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHH
Q 014172 148 ENGLS-YTPD-QILVSNGAKQSILQAVLAVCSPG-----DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKV 220 (429)
Q Consensus 148 ~~g~~-~~~~-~i~~t~G~~~al~~~l~~l~~~g-----d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~ 220 (429)
.+|.+ ++++ +|++|+|+++++..++++++++| |+|+++.|+|.++...++..|++++.+++ .++++.+|++.
T Consensus 82 ~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~g~~~d~~~ 160 (396)
T 3jtx_A 82 RYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANC-PAPSFNPDWRS 160 (396)
T ss_dssp HTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEEC-CTTTCCCCGGG
T ss_pred hcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeec-CCCCCccCHHH
Confidence 99977 7788 99999999999999999999997 79999999999999999999999999998 44677889999
Q ss_pred HHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCcccc----CCCCCCceEE
Q 014172 221 LESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS----LPGMWERTLT 296 (429)
Q Consensus 221 l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~----~~~~~~~~i~ 296 (429)
+++++++++++|++++||||||.+++.+++++|+++|++| |+++|+||+|.++.+++..+.+... +....+++++
T Consensus 161 l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 239 (396)
T 3jtx_A 161 ISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKY-GFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLM 239 (396)
T ss_dssp SCHHHHHTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-CCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEE
T ss_pred HHHhhccCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHc-CCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEE
Confidence 9999988999999999999999999999999999999999 9999999999999887643333221 2223688999
Q ss_pred EeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhc
Q 014172 297 VNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG 376 (429)
Q Consensus 297 ~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~ 376 (429)
+.||||.|+++|+|+||+++++++++.+.......+.+++.+.|.++.++|+. .+++++.++.++++++.+.+.|+
T Consensus 240 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~l~ 315 (396)
T 3jtx_A 240 FTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSAMSIPVQRASIAAWDD----EQHVIDNRRLYQEKFERVIPILQ 315 (396)
T ss_dssp EEESTTTSSCGGGCCEEEEECHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EeccccccCCcccceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999887777778999999999999985 67899999999999999999998
Q ss_pred cCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 377 ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 377 ~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++ +.+..|++++|+|++++.. +..+++++|++++||.+
T Consensus 316 ~~--~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~~gi~v 353 (396)
T 3jtx_A 316 QV--FDVKLPDASFYIWLKVPDG------------DDLAFARNLWQKAAIQV 353 (396)
T ss_dssp TT--SCCCCCSSSSEEEEECTTS------------CHHHHHHHHHHHHCEEC
T ss_pred hc--CCccCCCeeEEEEEECCCC------------CHHHHHHHHHHHCCEEE
Confidence 85 4566789999999999852 68899999988889986
No 15
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=6.8e-48 Score=384.31 Aligned_cols=340 Identities=22% Similarity=0.365 Sum_probs=291.8
Q ss_pred cccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHh
Q 014172 69 SPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKE 147 (429)
Q Consensus 69 s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~ 147 (429)
++++..++++.+..+...... ..|+++|+|+.|++++++++.+.+++.+.+.+. ..+|++..|..++|+++++++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~--~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~ 100 (404)
T 2o1b_A 23 SNKLANIPDSYFGKTMGRKIE--HGPLPLINMAVGIPDGPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQR 100 (404)
T ss_dssp CHHHHTSCCCTTC-------C--CCSSCCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHH
T ss_pred hhHhhhCCchHHHHHHHHHHh--cCCCCEEecCCcCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 566777777766665444332 356679999999999888899999999887432 34687778999999999999998
Q ss_pred hcCCCCCC-CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 148 ENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 148 ~~g~~~~~-~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
.+|.++++ ++|++|+|+++++..++++++++||+|+++.|+|.++...++..|++++.+++++ +++.+|+++|+++++
T Consensus 101 ~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~ 179 (404)
T 2o1b_A 101 QYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEP-PHYLPDWSKVDSQII 179 (404)
T ss_dssp HHCCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCT-TTCCCCGGGSCHHHH
T ss_pred HhCCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCc-ccCcCCHHHHHHhhc
Confidence 88987776 7999999999999999999999999999999999999999999999999999875 567789999999988
Q ss_pred cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccc
Q 014172 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (429)
Q Consensus 227 ~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 306 (429)
+++++|++++|+||||.+++.+++++|+++|++| |++||+||+|.++.+++ .+.++..+....++++++.||||.+|+
T Consensus 180 ~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~g~ 257 (404)
T 2o1b_A 180 DKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGT-DTKIVHDFAYGAFGFDA-KNPSILASENGKDVAIEIYSLSKGYNM 257 (404)
T ss_dssp HHEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTS-SCEEEEECTTTTCBSSS-CCCCGGGSTTHHHHEEEEEESTTTTTC
T ss_pred cCceEEEEcCCCCCCCccCCHHHHHHHHHHHHHc-CCEEEEEccchhcccCC-CCCChhhcCCCCCCEEEEEecchhccC
Confidence 7899999999999999999999999999999999 99999999999988865 344555554334788999999999999
Q ss_pred ccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC
Q 014172 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (429)
Q Consensus 307 ~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p 386 (429)
+|+|+||+++++++++.+......+..+++.+.|.++.++|+. .+++++++++.++++++.+.+.|+++ |+++..+
T Consensus 258 ~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 333 (404)
T 2o1b_A 258 SGFRVGFAVGNKDMIQALKKYQTHTNAGMFGALQDAAIYALNH---YDDFLEEQSNVFKTRRDRFEAMLAKA-DLPFVHA 333 (404)
T ss_dssp GGGCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEECC
T ss_pred chhheEeEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHhc-CCeecCC
Confidence 9999999999999999998877777778999999999999986 47889999999999999999999998 8988889
Q ss_pred CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 387 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++|+|+|++++.. .+..+++++|++++||.+
T Consensus 334 ~~g~~~~~~~~~~-----------~~~~~l~~~l~~~~gi~v 364 (404)
T 2o1b_A 334 KGGIYVWLETPPG-----------YDSEQFEQFLVQEKSILV 364 (404)
T ss_dssp CBSSEEEEECCTT-----------CCHHHHHHHHHHHHCEEC
T ss_pred CcceEEEEeCCCC-----------CCHHHHHHHHHHHCCEEE
Confidence 9999999999742 267899999997779976
No 16
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=2.2e-47 Score=376.53 Aligned_cols=334 Identities=23% Similarity=0.373 Sum_probs=291.5
Q ss_pred ccCC-chhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHhhcCC
Q 014172 74 AVKP-SKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGL 151 (429)
Q Consensus 74 ~~~~-~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~ 151 (429)
++++ +.+..+..........|+++|+|+.|++++++|+.+.+++.+.+.+. ..+|++..|..++|+++++++.+.+|.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~ 82 (376)
T 2dou_A 3 RVPEPSVFLVVDEAKRKARERGVGLIDLSIGSTDLPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGV 82 (376)
T ss_dssp -CCCTHHHHHHHHHHHHHHHTTCCCEECSSCCCCCCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSC
T ss_pred cCCccchHHHHHHHHHHhhccCCCEEeccCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 3455 66677777777666778899999999999888899999999887543 467866568899999999999988898
Q ss_pred CCCCC-cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCc
Q 014172 152 SYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSR 230 (429)
Q Consensus 152 ~~~~~-~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~ 230 (429)
+++++ +|++|+|+++++..++++++++||+|+++.|+|.++...++..|++++.+|+ ++++.+|++.++++++++++
T Consensus 83 ~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~l~~~~~ 160 (376)
T 2dou_A 83 GLDPRREALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPL--REDGLADLKAVPEGVWREAK 160 (376)
T ss_dssp CCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECB--CTTSSBCGGGSCHHHHHHEE
T ss_pred CCCCCccEEEcCCcHHHHHHHHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeC--CCCCCCCHHHHHHhhccCce
Confidence 77776 9999999999999999999999999999999999999999999999999998 45677899999998887899
Q ss_pred EEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccce
Q 014172 231 LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWR 310 (429)
Q Consensus 231 ~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R 310 (429)
+|++++||||||.+++.+++++|+++|++| |+++|+||+|.++.+++ ...++..+.+..++++++.||||.+|++|+|
T Consensus 161 ~v~l~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 238 (376)
T 2dou_A 161 VLLLNYPNNPTGAVADWGYFEEALGLARKH-GLWLIHDNPYVDQVYEG-EAPSPLALPGAKERVVELFSLSKSYNLAGFR 238 (376)
T ss_dssp EEEECSSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTGGGBSSS-CCCCGGGSTTGGGTEEEEEEHHHHHTCGGGC
T ss_pred EEEECCCCCCcCccCCHHHHHHHHHHHHHc-CCEEEEEccchhcccCC-CCCChhhcCCCCCcEEEEecchhhcCChhhe
Confidence 999999999999999999999999999999 99999999999988876 3334444433457899999999999999999
Q ss_pred eeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceE
Q 014172 311 LGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAF 390 (429)
Q Consensus 311 ~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~ 390 (429)
+||+++++++++.+......++.+++.+.|.++.++|+. .++++++.++.++++++.+.+.|+++ +++.+|++|+
T Consensus 239 ~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~ 313 (376)
T 2dou_A 239 LGFALGSEEALARLERVKGVIDFNQYAGVLRMGVEALKT---PKEVVRGYARVYRERALGMAEALKGV--LSLLPPRATM 313 (376)
T ss_dssp CEEEEECHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHTS---CHHHHHHHHHHHHHHHHHHHHHHTTT--SEECCCCBSS
T ss_pred eEEEecCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHh--cCccCCCeeE
Confidence 999999999999998877777777899999999999986 47889999999999999999999987 7888889999
Q ss_pred EEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 391 YLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 391 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|+|++++.. .+..+++++|+++ ||.+
T Consensus 314 ~~~~~~~~~-----------~~~~~~~~~l~~~-gi~v 339 (376)
T 2dou_A 314 YLWGRLPEG-----------VDDLEFGLRLVER-GVAL 339 (376)
T ss_dssp EEEEECCTT-----------CCHHHHHHHHHHT-TEEC
T ss_pred EEEEECCCC-----------CCHHHHHHHHHHC-CEEE
Confidence 999999742 2678999999988 9976
No 17
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=3.3e-47 Score=379.29 Aligned_cols=352 Identities=31% Similarity=0.524 Sum_probs=300.8
Q ss_pred cccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHh
Q 014172 69 SPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKE 147 (429)
Q Consensus 69 s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~ 147 (429)
++++..++++.+.++.+.. .+.++|+|+.|+|++++|+.+.+++.+.+.+. ..+|++..|..++|+++++++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~-----~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~ 76 (410)
T 3e2y_A 2 AKRIEGLDSNVWVEFTKLA-----ADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGK 76 (410)
T ss_dssp CGGGTTCCCCHHHHTTTTT-----TSTTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHH
T ss_pred chhhccCCccHHHHHHHHh-----cCCCeEEecCCCCCCCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHH
Confidence 3566777777665554322 34579999999999999999999999988653 45898888999999999999999
Q ss_pred hcCCCCCC-CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCC---------CCCCCCC
Q 014172 148 ENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRI---------SENFLLD 217 (429)
Q Consensus 148 ~~g~~~~~-~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~---------~~~~~~d 217 (429)
.+|..+++ ++|++|+|+++++..++++++++||+|+++.|+|..+...++..|++++.+++++ +.++.+|
T Consensus 77 ~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d 156 (410)
T 3e2y_A 77 IYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFD 156 (410)
T ss_dssp HHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECC
T ss_pred HhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCC
Confidence 99988888 8999999999999999999999999999999999999999999999999999863 2456789
Q ss_pred HHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEE
Q 014172 218 PKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTV 297 (429)
Q Consensus 218 ~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~ 297 (429)
++++++++++++++|++++||||||.+++.+++++|+++|++| |+++|+||+|.++.|++....++..+....++++++
T Consensus 157 ~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 235 (410)
T 3e2y_A 157 PRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKH-DTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITI 235 (410)
T ss_dssp HHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEE
T ss_pred HHHHHhhcCCCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHc-CcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEE
Confidence 9999999998999999999999999999999999999999999 999999999999999887677777776667899999
Q ss_pred eccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhc-----CCCChHHHHHHHHHHHHHHHHHH
Q 014172 298 NGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL-----GYAGGEVVSKMVKAFRERRDFLV 372 (429)
Q Consensus 298 ~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~-----~~~~~~~~~~~~~~~~~~r~~l~ 372 (429)
.||||.+|++|+|+||+++++++++.+........++++.+.|.++..+|+. .. ..++++++++.++++++++.
T Consensus 236 ~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~ 314 (410)
T 3e2y_A 236 GSAGKTFSVTGWKLGWSIGPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDD-PECYFNSLPKELEVKRDRMV 314 (410)
T ss_dssp EEHHHHSSCGGGCCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTS-TTSHHHHHHHHHHHHHHHHH
T ss_pred ecchhhcCCCCceEEEEEECHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccc-hHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998887777778899999999999873 11 25788999999999999999
Q ss_pred HHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 373 KSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 373 ~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.|+++ |+.+..|++++|+|++++..............++.+++.+|++++||.+
T Consensus 315 ~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v 369 (410)
T 3e2y_A 315 RLLNSV-GLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTA 369 (410)
T ss_dssp HHHHTT-TCEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEEC
T ss_pred HHHHHC-CCeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEE
Confidence 999998 9999899999999999875311000000000124589999988889986
No 18
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=7.1e-47 Score=379.55 Aligned_cols=355 Identities=25% Similarity=0.455 Sum_probs=300.1
Q ss_pred ccCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHc---CCCCCCCCCCCHHHHHHHH
Q 014172 66 VSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE---GFTRYTPNAGTLELRSAIC 142 (429)
Q Consensus 66 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~---~~~~Y~~~~G~~~lr~~ia 142 (429)
+.+++++..+.++.+..+.+... ..++|+|+.|.+++++|+.+.+++.+.+.. ....|++..|..++|++++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la 87 (429)
T 1yiz_A 13 FDLPKRYQGSTKSVWVEYIQLAA-----QYKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALS 87 (429)
T ss_dssp CCSSSSCCCCTTCHHHHHHHHHH-----HHCCEECCSSSCSSCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHH
T ss_pred cchhHHhhhCCchHHHHHHHHhc-----cCCEEEecCCCCCCCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHH
Confidence 45788888888876655544332 135899999999988899999999998865 3467988789999999999
Q ss_pred HHHHhhcCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCC--------C
Q 014172 143 HKLKEENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISE--------N 213 (429)
Q Consensus 143 ~~l~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~--------~ 213 (429)
+++.+.+|.+++++ +|++|+|+++++..++++++++||+|+++.|+|.++...++..|++++.+|++.++ +
T Consensus 88 ~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 167 (429)
T 1yiz_A 88 KLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSAD 167 (429)
T ss_dssp HHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGG
T ss_pred HHHHHHhCCCCCCcCCEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccC
Confidence 99998889777888 99999999999999999999999999999999999999999999999999987643 5
Q ss_pred CCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCc
Q 014172 214 FLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 293 (429)
Q Consensus 214 ~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~ 293 (429)
+.+|++.|++++++++++|++++|+||||.+++.+++++|+++|++| |+++|+||+|.++.|++....++..+....++
T Consensus 168 ~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 246 (429)
T 1yiz_A 168 WVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKW-NVLCVSDEVYEHMVFEPFEHIRICTLPGMWER 246 (429)
T ss_dssp CBCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTTTCBCTTSCCCCGGGSTTTGGG
T ss_pred cccCHHHHHHHhccCceEEEECCCCCCCCccCCHHHHHHHHHHHHHc-CcEEEEeccccccccCCCCCcChhhccCCcCc
Confidence 67999999999988899999999999999999999999999999999 99999999999999877655666666444688
Q ss_pred eEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhc-----CCCChHHHHHHHHHHHHHH
Q 014172 294 TLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL-----GYAGGEVVSKMVKAFRERR 368 (429)
Q Consensus 294 ~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~-----~~~~~~~~~~~~~~~~~~r 368 (429)
++++.||||.+|++|+|+||+++++++++.+.......+++.+.+.|.++.++|+. +.. +++++++++.+++++
T Consensus 247 ~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~ 325 (429)
T 1yiz_A 247 TITIGSAGKTFSLTGWKIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSP-ECYFNSISGELMAKR 325 (429)
T ss_dssp EEEEEEHHHHHTCGGGCCEEEESCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTST-TSHHHHHHHHHHHHH
T ss_pred eEEEecchhccCCCCcceEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccch-HHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988876666777899999999999986 432 678899999999999
Q ss_pred HHHHHHhccCCCceeecCCceEEEEEecCCccCCc-ccCCCCCCChHHHHHHHHHhCCeec
Q 014172 369 DFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSE-AEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 369 ~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.+.+.|+++ |+++..|++|+|+|++++...... ........+..+++++|++++||.+
T Consensus 326 ~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v 385 (429)
T 1yiz_A 326 DYMASFLAEV-GMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQG 385 (429)
T ss_dssp HHHHHHHHHH-TCEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEEC
T ss_pred HHHHHHHHhC-CCcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEE
Confidence 9999999988 898888999999999997520000 0000000246789999987779986
No 19
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=9.4e-47 Score=374.71 Aligned_cols=336 Identities=25% Similarity=0.449 Sum_probs=287.7
Q ss_pred ccCccccccc--CCchhHHHHHHHHHHHhc--CCCeEEcCCCCCCCCChHHHHHHHHHHHHcC----CCCCCCCCCCHHH
Q 014172 66 VSLSPRVNAV--KPSKTVAITDQATALAQA--GVSVIRLAAGEPDFDTPVLIAEAGINAIREG----FTRYTPNAGTLEL 137 (429)
Q Consensus 66 ~~~s~~~~~~--~~~~~~~~~~~~~~~~~~--g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~----~~~Y~~~~G~~~l 137 (429)
|.++++++.+ .++.++++...+.++... ++++|+|+.|+|++++|+.+.+++.+.+.+. ...|++..|..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~l 81 (398)
T 3ele_A 2 MVVNESMYQLGSVRSAIRELFEYGKKRAAIVGKENVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVET 81 (398)
T ss_dssp CSSCHHHHHHHHCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHH
T ss_pred cchhHHHhccccCchhHHHHHHHHHHHHhhcCCCCeEEeecCCCCCCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHH
Confidence 4578889888 688888888877766543 4679999999999989999999999988764 4689888999999
Q ss_pred HHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCC-CEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCC
Q 014172 138 RSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLL 216 (429)
Q Consensus 138 r~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 216 (429)
|+++++++.+.+|..+++++|++|+|+++++..++++++++| |+|+++.|+|.++...++..|++++.+|+++ +++.+
T Consensus 82 r~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~-~~~~~ 160 (398)
T 3ele_A 82 RAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPADT-EHFQI 160 (398)
T ss_dssp HHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCT-TTSSC
T ss_pred HHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCC-cCCcC
Confidence 999999999999988899999999999999999999999999 9999999999999999999999999999875 36789
Q ss_pred CHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHh------CCCeEEEEccCCcccccCCCCCCccccCCCC
Q 014172 217 DPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK------HPRLLVLSDEIYEHIIYAPATHTSFASLPGM 290 (429)
Q Consensus 217 d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~------~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~ 290 (429)
|+++|++++++++++|++++||||||.+++.+++++|+++|++ | |++||+||+|.++.|++...+.... .
T Consensus 161 d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~---~ 236 (398)
T 3ele_A 161 DFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGR-PIFIIADEPYREIVYDGIKVPFVTK---Y 236 (398)
T ss_dssp CHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTS-CCEEEEECTTTTCBCTTCCCCCGGG---T
T ss_pred CHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCC-CeEEEEeccccccccCCCCcCChHh---h
Confidence 9999999999899999999999999999999999999999999 9 9999999999999887643333322 2
Q ss_pred CCceEEEeccChhcccccceeeEEEcCHHH------HHHHHHHhhc-ccCCCchHHHHHHHHHHhcCCCChHHHHHHHHH
Q 014172 291 WERTLTVNGFSKAFAMTGWRLGYIAGPKHF------VAACNKIQSQ-FTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (429)
Q Consensus 291 ~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~------~~~l~~~~~~-~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~ 363 (429)
.+++++++||||.+|++|+|+||+++++++ .+.+...... ...+++.+.|.++..+++.. . .++.
T Consensus 237 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~-----~~~~ 308 (398)
T 3ele_A 237 YDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGAT---G-----DINA 308 (398)
T ss_dssp CSSEEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCC---C-----CHHH
T ss_pred cCCeEEEEehhhcCCCccceeEEEEEcchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCH---H-----HHHH
Confidence 578999999999999999999999998874 3344433332 24567888888888777652 1 3577
Q ss_pred HHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 364 FRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 364 ~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++++++++.+.|+++ |+++..|++++|+|++++.. +..++++.|. ++||.+
T Consensus 309 ~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~-~~gi~v 359 (398)
T 3ele_A 309 YKENRDLLYEGLTRI-GYHCFKPDGAFYMFVKALED------------DSNAFCEKAK-EEDVLI 359 (398)
T ss_dssp HHHHHHHHHHHHHHH-TCCEECCSBSSEEEEECSSS------------CHHHHHHHHH-TTTEEC
T ss_pred HHHHHHHHHHHHHHc-CCeecCCCeeEEEEEEcCCC------------CHHHHHHHHH-HCCEEE
Confidence 889999999999988 89999999999999999753 6788998775 459976
No 20
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=5.3e-47 Score=380.61 Aligned_cols=352 Identities=24% Similarity=0.391 Sum_probs=288.2
Q ss_pred ccccCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCC----CCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHH
Q 014172 64 VDVSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPD----FDTPVLIAEAGINAIREG-FTRYTPNAGTLELR 138 (429)
Q Consensus 64 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~----~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr 138 (429)
|.+.++..... .+.+++.+.+..+....+++++|+|+.|+|+ +++|+.+.+++.+.+... ...|++..|..++|
T Consensus 24 w~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr 102 (427)
T 3dyd_A 24 WSVRPSDMAKK-TFNPIRAIVDNMKVKPNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSR 102 (427)
T ss_dssp CCCCCCC-----------------CCCCCTTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHH
T ss_pred cCcchhhHhhc-ccchHHHHHHHHhhcccCCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHH
Confidence 55555544333 2334444444443323346678999999975 577899999999988764 46898899999999
Q ss_pred HHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCH
Q 014172 139 SAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDP 218 (429)
Q Consensus 139 ~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 218 (429)
+++++++.+. |.++++++|++|+|+++++.+++..++++||+|+++.|+|.++...++..|++++.+++++++++.+|+
T Consensus 103 ~~la~~~~~~-~~~~~~~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 181 (427)
T 3dyd_A 103 EEIASYYHCP-EAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDL 181 (427)
T ss_dssp HHHHHHHCBT-TBCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECH
T ss_pred HHHHHHHhhc-CCCCChHHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCH
Confidence 9999999765 777788999999999999999999999999999999999999999999999999999998777788999
Q ss_pred HHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEe
Q 014172 219 KVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVN 298 (429)
Q Consensus 219 e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~ 298 (429)
+.+++.+++++++|++++||||||.+++.+++++|+++|++| |+++|+||+|.++.|++....++..+.. ..++++++
T Consensus 182 ~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~-~~~~i~Deay~~~~~~g~~~~~~~~~~~-~~~vi~~~ 259 (427)
T 3dyd_A 182 KQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQ-CVPILADEIYGDMVFSDCKYEPLATLST-DVPILSCG 259 (427)
T ss_dssp HHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCCEEEECTTTTCBCSSCCCCCGGGGCS-SCCEEEEE
T ss_pred HHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEEcCchhhccCCCcCccHHHhCC-CCcEEEEe
Confidence 999999998899999999999999999999999999999999 9999999999999988766666666654 46789999
Q ss_pred ccChhcccccceeeEEEcC-------HHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHH
Q 014172 299 GFSKAFAMTGWRLGYIAGP-------KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 371 (429)
Q Consensus 299 S~SK~~~~~G~R~G~v~~~-------~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l 371 (429)
||||.|+++|+|+||++++ +++++.+...... .++++.++|.++.++|+.. ..+++++++++++++++.+
T Consensus 260 S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~-~~~~~~~~~~a~~~~L~~~--~~~~~~~~~~~~~~~~~~l 336 (427)
T 3dyd_A 260 GLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQR-ILGPCTIVQGALKSILCRT--PGEFYHNTLSFLKSNADLC 336 (427)
T ss_dssp ESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHHHHHH-HCCSCHHHHHHHHHHHHHS--CHHHHHHHHHHHHHHHHHH
T ss_pred eccccCCCcCcceEEEEecCcchhhHHHHHHHHHHHHhc-cCCCCHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987 4677777766443 4678999999999999842 3678999999999999999
Q ss_pred HHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 372 VKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 372 ~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+.|+++||+++..|++++|+|++++... +....+..+++++|++++||.+
T Consensus 337 ~~~L~~~~g~~~~~p~~g~~~~~~l~~~~------~~~~~~~~~~~~~l~~~~gV~v 387 (427)
T 3dyd_A 337 YGALAAIPGLRPVRPSGAMYLMVGIEMEH------FPEFENDVEFTERLVAEQSVHC 387 (427)
T ss_dssp HHHHHHSTTEEEECCSBTTEEEEEECGGG------CTTCSSHHHHHHHHHHHHCEEC
T ss_pred HHHHhcCCCceecCCCeeEEEEEecCHhh------cCCCCCHHHHHHHHHHHCCEEE
Confidence 99999999999989999999999886310 0011367899999987779976
No 21
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=4.1e-46 Score=366.64 Aligned_cols=330 Identities=33% Similarity=0.565 Sum_probs=294.0
Q ss_pred CcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHh
Q 014172 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 147 (429)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~ 147 (429)
+++++..++++.+.++...+.+....|+++|+|+.|.+++++|+.+.+++.+.+..+...|++..|..++|+++++++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~ 81 (370)
T 2z61_A 2 LSKRLLNFESFEVMDILALAQKLESEGKKVIHLEIGEPDFNTPKPIVDEGIKSLKEGKTHYTDSRGILELREKISELYKD 81 (370)
T ss_dssp CCHHHHHCCCCTTHHHHHHHHHHHHTTCCCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHH
T ss_pred hhhhhhhccccHHHHHHHHHHHHHhcCCCEEEccCCCCCCCCCHHHHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHHHH
Confidence 56788888999888888888877777889999999999988889999999999877667898888999999999999999
Q ss_pred hcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc
Q 014172 148 ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 227 (429)
Q Consensus 148 ~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~ 227 (429)
.+|+++++++|++|+|+++++..++++++++||+|++++|+|+++...++..|++++.++ +|++++++.+++
T Consensus 82 ~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~--------~d~~~l~~~l~~ 153 (370)
T 2z61_A 82 KYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD--------FTVESLEEALSD 153 (370)
T ss_dssp HSSCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEEC--------SSHHHHHHHCCS
T ss_pred HhCCCCChhhEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeC--------CCHHHHHHhccc
Confidence 899888899999999999999999999999999999999999999999999999999987 589999999988
Q ss_pred CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccc
Q 014172 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 307 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 307 (429)
++++|++++|+||||.+++.+ |.++|++| |+++|+||+|.++.+++ ...++..+.+..++++++.||||.+|++
T Consensus 154 ~~~~v~~~~p~nptG~~~~~~----l~~~~~~~-~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 227 (370)
T 2z61_A 154 KTKAIIINSPSNPLGEVIDRE----IYEFAYEN-IPYIISDEIYNGLVYEG-KCYSAIEFDENLEKTILINGFSKLYAMT 227 (370)
T ss_dssp SEEEEEEESSCTTTCCCCCHH----HHHHHHHH-CSEEEEECTTTTCBSSS-CCCCGGGTCTTCSSEEEEEESTTTTTCG
T ss_pred CceEEEEcCCCCCcCcccCHH----HHHHHHHc-CCEEEEEcchhhcccCC-CCcCHHHccCCCCcEEEEecChhccCCc
Confidence 899999999999999999955 99999999 99999999999988876 3445666544468899999999999999
Q ss_pred cceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhc-CCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC
Q 014172 308 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL-GYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (429)
Q Consensus 308 G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~-~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p 386 (429)
|+|+||+++++++++.+.........+++.+.|.++.++|+. + +++++++++.++++++++.+.|+++ |+++..|
T Consensus 228 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 303 (370)
T 2z61_A 228 GWRIGYVISNDEIIEAILKLQQNLFISAPTISQYAALKAFEKET---EREINSMIKEFDRRRRLVLKYVKDF-GWEVNNP 303 (370)
T ss_dssp GGCCEEEECCHHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHH---HHHHHHHHHHHHHHHHHHHHHHHHT-TCBCCCC
T ss_pred cceEEEEEECHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHHHHHHHHHc-CCeecCC
Confidence 999999999999999998877767778899999998888863 1 5678889999999999999999998 8988889
Q ss_pred CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 387 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++|+|+|++++. +..+++++|++++||.+
T Consensus 304 ~~~~~~~~~~~~-------------~~~~~~~~l~~~~gi~v 332 (370)
T 2z61_A 304 IGAYYVFPNIGE-------------DGREFAYKLLKEKFVAL 332 (370)
T ss_dssp CBTTEECCBCSS-------------CHHHHHHHHHHHHCEEC
T ss_pred CcceEEEEecCC-------------CHHHHHHHHHHhCCEEE
Confidence 999999998863 47789999986669876
No 22
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=2.7e-47 Score=381.84 Aligned_cols=345 Identities=15% Similarity=0.166 Sum_probs=283.8
Q ss_pred ccCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCC---CCCCCCh--HHHHHHHHHHHHc-CCCCCCCCCCCHHHHH
Q 014172 66 VSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAG---EPDFDTP--VLIAEAGINAIRE-GFTRYTPNAGTLELRS 139 (429)
Q Consensus 66 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g---~~~~~~p--~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~ 139 (429)
|++++++..++++.+..+...+... ..+++|+|+.| +|+..+| +.+.+++.+.+.+ ...+|++..|..++|+
T Consensus 22 ~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~ 99 (420)
T 4f4e_A 22 MSLFSAVELAPRDPILGLNEAFNAD--TRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDA 99 (420)
T ss_dssp CCTTTTCCCCCCCHHHHHHHHHHHC--CCSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHH
T ss_pred cCHhhcCCcCCCChHHHHHHHHHhc--CCCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHH
Confidence 5688999999999888887766543 34579999999 6776665 8999999998876 4568999999999999
Q ss_pred HHHHHHHhhcCCCCCCC--cEEEecChHHHHHHH--HHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCC
Q 014172 140 AICHKLKEENGLSYTPD--QILVSNGAKQSILQA--VLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFL 215 (429)
Q Consensus 140 ~ia~~l~~~~g~~~~~~--~i~~t~G~~~al~~~--l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~ 215 (429)
++++++....+..++++ +|++|+|+++++..+ +.+++++||+|++++|+|.+|...++..|++++.+|+..++++.
T Consensus 100 ~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 179 (420)
T 4f4e_A 100 SVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNG 179 (420)
T ss_dssp HHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTE
T ss_pred HHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCc
Confidence 99999976555444677 899999999999998 45668999999999999999999999999999999985445688
Q ss_pred CCHHHHHhhcc---cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCC-CCCccccCCCCC
Q 014172 216 LDPKVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA-THTSFASLPGMW 291 (429)
Q Consensus 216 ~d~e~l~~~l~---~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~-~~~~~~~~~~~~ 291 (429)
+|++.+++.++ ++++++++++||||||.+++.+++++|+++|++| |+++|+||+|.++.|++. ...++..+....
T Consensus 180 ~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~-~~~li~De~y~~~~~~~~~~~~~~~~~~~~~ 258 (420)
T 4f4e_A 180 VNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKAR-RLVPFLDIAYQGFGESIEADAAAVRLFAAAN 258 (420)
T ss_dssp ECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEEESCTTSSSCTTGGGHHHHHHHHTT
T ss_pred cCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHC-CcEEEEccccccccCCcchhhHHHHHHHhcC
Confidence 99999999997 6788999999999999999999999999999999 999999999999998752 234455444446
Q ss_pred CceEEEeccChhcccccceeeEEEc---CHHHHHH----HHHHhhcccCCCchHHHHHHHHHHhcCCC---ChHHHHHHH
Q 014172 292 ERTLTVNGFSKAFAMTGWRLGYIAG---PKHFVAA----CNKIQSQFTSGASSISQKAGVAALGLGYA---GGEVVSKMV 361 (429)
Q Consensus 292 ~~~i~~~S~SK~~~~~G~R~G~v~~---~~~~~~~----l~~~~~~~~~~~~~~~q~aa~~~l~~~~~---~~~~~~~~~ 361 (429)
+++++++||||.||++|+|+||+++ ++++++. +.........+++.+.|.++..++..... .++++++++
T Consensus 259 ~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 338 (420)
T 4f4e_A 259 LNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMR 338 (420)
T ss_dssp CCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 8999999999999999999999863 4565544 33333445566889999999888875210 035688899
Q ss_pred HHHHHHHHHHHHHhccC---CCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 362 KAFRERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 362 ~~~~~~r~~l~~~L~~l---~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
++|+++|+.+.+.|+++ +|+.+..|++|||+|++++ . +.+.++++++||.+.
T Consensus 339 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~---------------~-~~~~~~l~~~gI~v~ 393 (420)
T 4f4e_A 339 DRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGLT---------------S-AQVDRLREEFGIYAV 393 (420)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSCCTHHHHSCSSEEECCCC---------------H-HHHHHHHHHHCEECC
T ss_pred HHHHHHHHHHHHHHHhcCCCCCceeECCCccEEEEeCCC---------------H-HHHHHHHHhCCEEec
Confidence 99999999999999986 4788888999999998763 3 345566667799863
No 23
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=3.1e-46 Score=372.82 Aligned_cols=338 Identities=27% Similarity=0.504 Sum_probs=299.6
Q ss_pred CcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHh
Q 014172 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 147 (429)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~ 147 (429)
+++++.+++++.+.++...+.++...|+++|+|+.|.+++++|+.+.+++ +.+.++...|++..|..++|+++++++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~-~~l~~~~~~y~~~~g~~~l~~~la~~~~~ 94 (409)
T 2gb3_A 16 FSDRVLLTEESPIRKLVPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERI-YENKPEVVYYSHSAGIWELREAFASYYKR 94 (409)
T ss_dssp CCHHHHSCCCCTTGGGHHHHHHHHHTTCEEEECSSCCCCSCCCTHHHHHH-HHTCCSSCCCCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHhhcCCccHHHHHHHHHHHHHhcCCCEEeccCCCCCCCCCHHHHHHH-HHHhcCCCCCCCCCCcHHHHHHHHHHHHH
Confidence 78999999999888888888887778889999999999888888999999 88766566898888999999999999998
Q ss_pred hcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc
Q 014172 148 ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 227 (429)
Q Consensus 148 ~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~ 227 (429)
.+|+++++++|++|+|+++++..++++++++||+|+++.|+|.++...++..|++++.+|+++++++.+ ++.|++++++
T Consensus 95 ~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~l~~~l~~ 173 (409)
T 2gb3_A 95 RQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNLESFINE 173 (409)
T ss_dssp TSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTTGGGGCCT
T ss_pred HhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHHHHHhhCc
Confidence 888888889999999999999999999999999999999999999999999999999999875455656 8999999988
Q ss_pred CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccc
Q 014172 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 307 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 307 (429)
++++|++++|+||||.+++.+++++|+++|++| |+++|+||+|.++.+++ ...++ +....+++++++||||.+|++
T Consensus 174 ~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~Dea~~~~~~~~-~~~~~--~~~~~~~~i~~~s~sK~~g~~ 249 (409)
T 2gb3_A 174 RTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERH-GLFLIVDEVYSEIVFRG-EFASA--LSIESDKVVVIDSVSKKFSAC 249 (409)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTTTCBCSS-CCCCG--GGSCCTTEEEEEESTTTTTCG
T ss_pred CCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHc-CCEEEEECcccccccCC-CCCCc--cccCCCCEEEEecchhccCCc
Confidence 899999999999999999999999999999999 99999999999988865 23333 222246789999999999999
Q ss_pred cceeeEEEcCH-HHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCcee-ec
Q 014172 308 GWRLGYIAGPK-HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM-SE 385 (429)
Q Consensus 308 G~R~G~v~~~~-~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~-~~ 385 (429)
|+|+||+++++ ++++.+......+. +++.+.|.++.++|+. ..++++++++.++++++++.+.|+++ |+++ ..
T Consensus 250 G~r~G~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 324 (409)
T 2gb3_A 250 GARVGCLITRNEELISHAMKLAQGRL-APPLLEQIGSVGLLNL---DDSFFDFVRETYRERVETVLKKLEEH-GLKRFTK 324 (409)
T ss_dssp GGCCEEEECSCHHHHHHHHHHHHHSC-CCCHHHHHHHHHHHTC---CHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCC
T ss_pred cceEEEEEECcHHHHHHHHHHHhccC-CCCHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHHHc-CceeeeC
Confidence 99999999998 99999888766666 7899999999999976 47789999999999999999999998 8888 78
Q ss_pred CCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHh-----CCeec
Q 014172 386 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDK-----AQVLL 428 (429)
Q Consensus 386 p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~-----~gV~v 428 (429)
|++++|+|++++. .+..+++++|+++ +||.+
T Consensus 325 ~~~~~~~~~~~~~------------~~~~~l~~~l~~~~~~~~~gi~v 360 (409)
T 2gb3_A 325 PSGAFYITAELPV------------EDAEEFARWMLTDFNMDGETTMV 360 (409)
T ss_dssp CSBSSEEEEECSS------------SCHHHHHHHHHHSCCBTTEEEEC
T ss_pred CCeeEEEEEEeCC------------CCHHHHHHHHHhccccccCcEEE
Confidence 8999999999873 2688999999887 68875
No 24
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=1.6e-46 Score=376.89 Aligned_cols=343 Identities=20% Similarity=0.272 Sum_probs=284.0
Q ss_pred cccccCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHH--HHHHH---------HHHHHcCCCCCCCC
Q 014172 63 QVDVSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVL--IAEAG---------INAIREGFTRYTPN 131 (429)
Q Consensus 63 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~--v~~a~---------~~~~~~~~~~Y~~~ 131 (429)
++...+|++++.++++.+.++.+.+.. .++++|+|+.|.|+..++|. +..++ ..... ...+|++.
T Consensus 2 ~~~~~~s~~~~~~~~~~~~~~~~~~~~---~~~~~i~l~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~~ 77 (425)
T 2r2n_A 2 NYARFITAASAARNPSPIRTMTDILSR---GPKSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMK-RALQYSPS 77 (425)
T ss_dssp CGGGGSCHHHHTCCCCSGGGHHHHHHH---SCTTCEECCCCCCCGGGCSEEEEEEEETTSCCEEECHHHHH-HHTSCCCT
T ss_pred chhHHHHHHHhcCCCchHHHHHHHhhc---CCCCeEEcCCcCCCchhCCHHHHHHHHhhcccccccccchh-hhcCCCCC
Confidence 345568999999999998888776653 23579999999998665331 00000 11111 12579999
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCC-------CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEE
Q 014172 132 AGTLELRSAICHKLKEENGLSYT-------PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPV 204 (429)
Q Consensus 132 ~G~~~lr~~ia~~l~~~~g~~~~-------~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~ 204 (429)
.|.++||++|++++.+.+|.+.+ +++|++|+|+++++.+++++++++||+|++++|+|.++...++..|++++
T Consensus 78 ~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~ 157 (425)
T 2r2n_A 78 AGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNII 157 (425)
T ss_dssp TCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHGGGTCEEE
T ss_pred CCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEE
Confidence 99999999999999998997664 37999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCCCCCCHHHHHhhcc------------cCCcEEEE-cCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCC
Q 014172 205 ILPTRISENFLLDPKVLESKLT------------EKSRLLIL-CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY 271 (429)
Q Consensus 205 ~v~~~~~~~~~~d~e~l~~~l~------------~~~~~i~l-~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay 271 (429)
.++++.+ .+|++.|++.++ +++++|++ ++||||||.+++.+++++|+++|++| |++||+||+|
T Consensus 158 ~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~-~~~li~De~~ 233 (425)
T 2r2n_A 158 NVASDES---GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKY-DFLIIEDDPY 233 (425)
T ss_dssp EECEETT---EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTT
T ss_pred EeCcCCC---CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHc-CCEEEEECCc
Confidence 9998642 389999999886 46888876 79999999999999999999999999 9999999999
Q ss_pred cccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhc--
Q 014172 272 EHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL-- 349 (429)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~-- 349 (429)
.++.|++....++..+.. .+++++++||||.++ +|+|+||+++++++++.+.........+++.++|.++..+|+.
T Consensus 234 ~~~~~~g~~~~~~~~~~~-~~~~i~~~s~SK~~~-~GlRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~ 311 (425)
T 2r2n_A 234 YFLQFNKFRVPTFLSMDV-DGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWG 311 (425)
T ss_dssp GGGBSSSSCCCCTGGGCT-TSCEEEEEESTTTTC-STTCCEEEEEEHHHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCccccCC-CCCEEEEccchhhcc-CccceEEEecCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcc
Confidence 999998766667777653 578999999999999 9999999999999999998887777778999999999999874
Q ss_pred -CCCChHHHHHHHHHHHHHHHHHHHHhcc-CCCc-eeecCCceEEEEEecCCccCCcccCCCCCCChHHH-HHHHHHhCC
Q 014172 350 -GYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGV-KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESL-CRYLLDKAQ 425 (429)
Q Consensus 350 -~~~~~~~~~~~~~~~~~~r~~l~~~L~~-l~g~-~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~Ll~~~g 425 (429)
+. ..++++++++.|+++|+.+.+.|++ ++|+ .+..|++|+|+|++++.. .++.++ .+.| .++|
T Consensus 312 ~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~-----------~~~~~~~~~~l-~~~g 378 (425)
T 2r2n_A 312 EEG-FMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGI-----------NDVKELIEEKA-VKMG 378 (425)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTC-----------SCCHHHHHTHH-HHTT
T ss_pred cch-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCC-----------CCHHHHHHHHH-HHCC
Confidence 11 1467888999999999999999988 6776 567899999999999853 245565 5555 4669
Q ss_pred eec
Q 014172 426 VLL 428 (429)
Q Consensus 426 V~v 428 (429)
|.+
T Consensus 379 v~v 381 (425)
T 2r2n_A 379 VLM 381 (425)
T ss_dssp EEC
T ss_pred cEE
Confidence 986
No 25
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=1.1e-46 Score=376.22 Aligned_cols=344 Identities=17% Similarity=0.223 Sum_probs=286.4
Q ss_pred ccCcccccccCCchhHHHHHHHHHHHhc--CCCeEEcCCCCC-----CCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHH
Q 014172 66 VSLSPRVNAVKPSKTVAITDQATALAQA--GVSVIRLAAGEP-----DFDTPVLIAEAGINAIREGFTRYTPNAGTLELR 138 (429)
Q Consensus 66 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~--g~~~i~L~~g~~-----~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr 138 (429)
+.++.+.....++.+..+...+++.... |+++|+|+.|++ ++++|+.+.+++.+....+...|++..|..++|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr 85 (413)
T 3t18_A 6 MTIKRATWNNGPDLAFDINNKANAAIEKYGREAVINAALGTLLDDKGKIIALPSVYDRLDEMDRSHIASYAPIEGEKDYR 85 (413)
T ss_dssp SSCTTTCCCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHHHHHSCCCTTCCHHHH
T ss_pred hhhhhcccCCCCChHHHHHHHHhhhhhhccccceEeccccCccCCCCCcCChHHHHHHHHhcCcccccCcCCCCCCHHHH
Confidence 4458888889999999998888777665 668999999997 777888898887764333346898889999999
Q ss_pred HHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCH
Q 014172 139 SAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDP 218 (429)
Q Consensus 139 ~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 218 (429)
+++++++.+.++.. ++++|++|+|+++++..++++++++||+|++++|+|..|...++..|++++.+|+..++ |.+|+
T Consensus 86 ~~la~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~ 163 (413)
T 3t18_A 86 KIVIDTLFGPYKPE-GYISAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRKICEEFGRNFKTFEFFTDD-FAFNI 163 (413)
T ss_dssp HHHHHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHHHHHHHTCEEEEECCBCTT-SSBCH
T ss_pred HHHHHHHhcccCcc-ccCcEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHHHHHHHhCCeEEEeeccCCC-CCcCH
Confidence 99999997766532 44599999999999999999999999999999999999999999999999999986444 77999
Q ss_pred HHHHhhccc----CCc-EEEEcCC-CCCccCCCCHHHHHHHHHHHH------hCCCeEEEEccCCcccccCCCCCCcccc
Q 014172 219 KVLESKLTE----KSR-LLILCSP-SNPTGSVYPKNLLDEIARIVA------KHPRLLVLSDEIYEHIIYAPATHTSFAS 286 (429)
Q Consensus 219 e~l~~~l~~----~~~-~i~l~~p-~NPtG~~~~~~~l~~I~~~a~------~~~~i~vi~Deay~~~~~~~~~~~~~~~ 286 (429)
+.|++++++ +++ ++++++| |||||.+++.+++++|+++|+ +| |++||+||+|.++.+++....++..
T Consensus 164 ~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~-~~~li~De~y~~~~~~~~~~~~~~~ 242 (413)
T 3t18_A 164 DVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDK-KITLIVDVAYLEFAGDGDQQRKFFE 242 (413)
T ss_dssp HHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTC-EEEEEEECTTGGGSSSSSTTTGGGG
T ss_pred HHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCC-cEEEEEecccccccCChhhHHHHHH
Confidence 999999875 777 6778999 999999999999999999999 89 9999999999999887755445433
Q ss_pred -CCCCCCc--eEEEeccChhcccccceeeEEEc---CHHHHHHHHHHhhcc----cCCCchHHHHHHHHHHhcCCC--Ch
Q 014172 287 -LPGMWER--TLTVNGFSKAFAMTGWRLGYIAG---PKHFVAACNKIQSQF----TSGASSISQKAGVAALGLGYA--GG 354 (429)
Q Consensus 287 -~~~~~~~--~i~~~S~SK~~~~~G~R~G~v~~---~~~~~~~l~~~~~~~----~~~~~~~~q~aa~~~l~~~~~--~~ 354 (429)
.....++ +++++||||.||++|+|+||+++ ++++++.+....... ..+++.++|.++..+++.... ..
T Consensus 243 ~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 322 (413)
T 3t18_A 243 KFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIYE 322 (413)
T ss_dssp GGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHH
T ss_pred HHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHH
Confidence 3333344 58899999999999999999998 999999888764432 245788999998888875210 02
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 355 EVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 355 ~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++++++++.++++++++.+.|+++ |+++.+|+++||+|+++. +..++++.|. ++||.+
T Consensus 323 ~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~~~~--------------~~~~~~~~l~-~~gv~v 380 (413)
T 3t18_A 323 QELVDLRNMLKSRADVFVTAAKEN-KLTMIPYFGGFFTFIPTD--------------KAFDIVKDLE-KENIFT 380 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCCCSSSCEEEECS--------------CHHHHHHHHH-HTTEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc-CCCccCCCceEEEEeCCC--------------CHHHHHHHHH-hCCEEE
Confidence 345677889999999999999998 899999999999998773 6788998775 559986
No 26
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=2e-46 Score=378.56 Aligned_cols=339 Identities=23% Similarity=0.388 Sum_probs=292.2
Q ss_pred ccCcccccccCCc-hhHHHHHHHHHHHh--cCCCeEEcCCCCCCCCChHHHHHHHHHHHH-----cCCCCCCCCCCCHHH
Q 014172 66 VSLSPRVNAVKPS-KTVAITDQATALAQ--AGVSVIRLAAGEPDFDTPVLIAEAGINAIR-----EGFTRYTPNAGTLEL 137 (429)
Q Consensus 66 ~~~s~~~~~~~~~-~~~~~~~~~~~~~~--~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~-----~~~~~Y~~~~G~~~l 137 (429)
..++++++.+++. .+..+..+...... .|+++|+|+.|++++++|+.+.+++.+++. .....|++..|..+|
T Consensus 37 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l 116 (449)
T 3qgu_A 37 VQRNENFGKLRAGYLFPEIARRRKAHQEKNPDAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGAL 116 (449)
T ss_dssp CCCCHHHHHCCSCCHHHHHHHHHHHHHHHCTTCCCEECSSCCCCCCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHH
T ss_pred hhhhHHHHhCCCcchHHHHHHHHHHHHhhCCCCCEEEeeCCCCCCCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHH
Confidence 3567788888874 45566665554443 377899999999999999999999999887 456689888999999
Q ss_pred HHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCE----------EEEec
Q 014172 138 RSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADAT----------PVILP 207 (429)
Q Consensus 138 r~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~----------~~~v~ 207 (429)
|+++++++. +|+.+++++|++|+|+++++..+ ..++++||+|++++|+|.++...++..|++ ++.++
T Consensus 117 r~~ia~~~~--~g~~~~~~~i~~t~G~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~ 193 (449)
T 3qgu_A 117 REAVASTFY--GHAGRAADEIFISDGSKCDIARI-QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMV 193 (449)
T ss_dssp HHHHHHHHH--TTTTCCGGGEEEESCHHHHHHHH-HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEE
T ss_pred HHHHHHHHH--cCCCCCHHHEEEccCHHHHHHHH-HHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEe
Confidence 999999997 78778899999999999999988 888999999999999999999999999999 99999
Q ss_pred CCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccC
Q 014172 208 TRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL 287 (429)
Q Consensus 208 ~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~ 287 (429)
++.++++..|++++ +++++|++++||||||.+++.+++++|+++|++| |+++|+||+|.++.+++..+.++..+
T Consensus 194 ~~~~~~~~~~~~~~-----~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~-~~~li~Dea~~~~~~~~~~~~~~~~~ 267 (449)
T 3qgu_A 194 CNPDNHFFPDLSKA-----KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKN-GSILVYDAAYALYISNPDCPKTIYEI 267 (449)
T ss_dssp CCGGGTTCCCGGGC-----CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTGGGCCCTTSCSSGGGS
T ss_pred cccccCCcCChhHc-----CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHC-CcEEEEEcchHhhhcCCCCCCCHhhc
Confidence 98766666666542 5789999999999999999999999999999999 99999999999999887666677777
Q ss_pred CCCCCceEEEeccChhcccccceeeEEEcCHHHHH--------HHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHH
Q 014172 288 PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVA--------ACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 359 (429)
Q Consensus 288 ~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~--------~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~ 359 (429)
....++++++.||||.+|++|+|+||+++++++++ .+.........+++.++|.++.+++... ..+++++
T Consensus 268 ~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~ 345 (449)
T 3qgu_A 268 PGADEVAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPE--GLKEMNA 345 (449)
T ss_dssp TTGGGTEEEEEECSGGGTCTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHH--HHHHHHH
T ss_pred cCCCCcEEEEecchhhcCCccceeEEEecCHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhc--CHHHHHH
Confidence 65568899999999999999999999999988765 4555555555678999999999988741 1467889
Q ss_pred HHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 360 MVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 360 ~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+++.++++++++.+.|+++ |+++..+++++|+|++++. .++.+++++|++++||.+
T Consensus 346 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l~~~~gI~v 401 (449)
T 3qgu_A 346 MIKFYKENAQILKTTFTEM-GFSVYGGDDAPYIWVGFPG------------KPSWDVFAEILERCNIVT 401 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCEEESSSSSEEEEECTT------------SCHHHHHHHHHHHHCEEC
T ss_pred HHHHHHHHHHHHHHHHHHC-CCeeeCCCCeeEEEEECCC------------CCHHHHHHHHHHHCCEEE
Confidence 9999999999999999998 8999889999999999983 278899999999889986
No 27
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=2.2e-45 Score=365.97 Aligned_cols=348 Identities=22% Similarity=0.365 Sum_probs=297.9
Q ss_pred ccccccCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCC--ChHHHHHHHHHHHHcC---CCCCCCCCCCHH
Q 014172 62 VQVDVSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFD--TPVLIAEAGINAIREG---FTRYTPNAGTLE 136 (429)
Q Consensus 62 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~--~p~~v~~a~~~~~~~~---~~~Y~~~~G~~~ 136 (429)
|++...+++++..+.++.+..+...+.++..+|+++|+|+.|.|+.. +++.+.+++.+.+.+. .. |++..|..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~ 79 (407)
T 2zc0_A 1 MDYTKYLAGRANWIKGSALADVMKKASELQKKGVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSVM-YTPANGIPE 79 (407)
T ss_dssp CCGGGGSCGGGGGCCCCHHHHHHHHHHHHHHSSCCCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHH
T ss_pred CcchhhhhhhhccCCchHHHHHHHhhhcccCCCCceEeCCCCCCCchhCCHHHHHHHHHHHHhhcccccc-CCCCCCCHH
Confidence 34444578899999998888877776655456778999999987654 5788999999888653 35 888889999
Q ss_pred HHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCC
Q 014172 137 LRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLL 216 (429)
Q Consensus 137 lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 216 (429)
+|+++++++.+.+|.++++++|++|+|+++++..++++++++||+|+++.|+|.++...++..|++++.+|++++ .+
T Consensus 80 l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~---~~ 156 (407)
T 2zc0_A 80 LREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDND---GM 156 (407)
T ss_dssp HHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---EE
T ss_pred HHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEcccCCC---CC
Confidence 999999999888887778899999999999999999999999999999999999999999999999999998643 28
Q ss_pred CHHHHHhhcc----c--CCcEEE-EcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCC
Q 014172 217 DPKVLESKLT----E--KSRLLI-LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 289 (429)
Q Consensus 217 d~e~l~~~l~----~--~~~~i~-l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~ 289 (429)
|++.|+++++ + ++++|+ +++|+||||.+++.+++++|+++|++| |+++|+||+|..+.+++....++..+..
T Consensus 157 d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~ 235 (407)
T 2zc0_A 157 RVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKY-DLLIIEDTAYNFMRYEGGDIVPLKALDN 235 (407)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTTTSBSSCSSCCCGGGGCS
T ss_pred CHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEECCCcccccCCCCCCChhhcCC
Confidence 9999999987 5 788875 789999999999999999999999999 9999999999998887655555666543
Q ss_pred CCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCCh-HHHHHHHHHHHHHH
Q 014172 290 MWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGG-EVVSKMVKAFRERR 368 (429)
Q Consensus 290 ~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~-~~~~~~~~~~~~~r 368 (429)
.+++++++||||.++ +|+|+||+++++++++.+......++.+++.+.|.++.++++.... + +++++.++.+++++
T Consensus 236 -~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~ 312 (407)
T 2zc0_A 236 -EGRVIVAGTLSKVLG-TGFRIGWIIAEGEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYF-EKYHLEGALLGYKEKR 312 (407)
T ss_dssp -SCCEEEEEESTTTTC-TTSCCEEEECCHHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHH-HHHTTTTHHHHHHHHH
T ss_pred -CCCEEEEcccccccC-CCcceEEEecCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCc-hHHHHHHHHHHHHHHH
Confidence 468999999999999 9999999999999999998887777777899999999999986211 3 56778899999999
Q ss_pred HHHHHHhcc-CCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 369 DFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 369 ~~l~~~L~~-l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+++.+.|++ ++++++..|.+++|+|++++.. .+..+++++|++++||.+
T Consensus 313 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~l~~~l~~~~gi~v 362 (407)
T 2zc0_A 313 DIMLKALENHLPNAEFTKPIAGMFVMFFLPEG-----------ADGISFANELMEREGVVV 362 (407)
T ss_dssp HHHHHHHHHHCTTSCBCCCSBSSEEEEECSTT-----------CCHHHHHHHHHHHTCEEC
T ss_pred HHHHHHHHHhCCCCEEecCCCcEEEEEEcCCC-----------CCHHHHHHHHHHhCCeEE
Confidence 999999987 5788887888999999999742 268899999998879876
No 28
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=1.8e-45 Score=363.15 Aligned_cols=319 Identities=24% Similarity=0.379 Sum_probs=284.8
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHH
Q 014172 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (429)
Q Consensus 94 g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~ 173 (429)
++++|+|+.|++++++|+.+.+++.+.+.++...|++. ..++++++++++.+.+|.++++++|++|+|+++++..+++
T Consensus 23 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~ 100 (383)
T 3kax_A 23 NEELIHAWIADMDFEVPQPIQTALKKRIEHPIFGYTLP--PENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQ 100 (383)
T ss_dssp SSCCEECCCSSCSSCCCHHHHHHHHHHHHSCCCCCCCC--CTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHH
T ss_pred CCCeeecccccCCCCCCHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHH
Confidence 46899999999999999999999999998767778654 6899999999999999988888999999999999999999
Q ss_pred HhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCC-CCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHH
Q 014172 174 AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISE-NFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 252 (429)
Q Consensus 174 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~ 252 (429)
+++++||+|+++.|+|.++...++..|++++.+++++++ +|.+|++.|++++++++++|++++|+||||.+++.+++++
T Consensus 101 ~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~ 180 (383)
T 3kax_A 101 AFTKENESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPHNPIGRVWKKEELTK 180 (383)
T ss_dssp HHCCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTTTCCEEEEESSBTTTTBCCCHHHHHH
T ss_pred HhCCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCcCCeEEEEeCCCCCCCcCcCHHHHHH
Confidence 999999999999999999999999999999999987543 4778999999999889999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCC-CCceEEEeccChhcccccceeeEEEc-CHHHHHHHHHHhhc
Q 014172 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM-WERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQ 330 (429)
Q Consensus 253 I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~R~G~v~~-~~~~~~~l~~~~~~ 330 (429)
|+++|++| |+++|+||+|.++.+++....++..+... .++++++.||||.+|++|+|+||+++ ++++++.+......
T Consensus 181 l~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 259 (383)
T 3kax_A 181 LGSLCTKY-NVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKLRQAFTSIQYR 259 (383)
T ss_dssp HHHHHHHH-TCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHH
T ss_pred HHHHHHHC-CCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCCHHHHHHHHHHHhh
Confidence 99999999 99999999999999887666666666432 47899999999999999999999998 68899988877655
Q ss_pred cc-CCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc-CCCceeecCCceEEEEEecCCccCCcccCCC
Q 014172 331 FT-SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFG 408 (429)
Q Consensus 331 ~~-~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~ 408 (429)
+. ++++.+++.++.++++. .++++++++++++++++.+.+.|++ +||+++..|++++++|++++.. +
T Consensus 260 ~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~------- 328 (383)
T 3kax_A 260 QGFHGLNIFAYTAMQSAYTE---CNDWLNEIRFYIEDNAKFACEYIKDHIPTLSVMKPEGSFLLWIDCSAL-N------- 328 (383)
T ss_dssp TTCCCCCHHHHHHHHHHTTT---CHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCSBSSEEEEECGGG-C-------
T ss_pred cccCCCCHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCceEEEEEEcccc-C-------
Confidence 43 37899999999999986 5788999999999999999999998 7899999999999999999752 1
Q ss_pred CCCChHHHHHHHHHhCCeec
Q 014172 409 KIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 409 ~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+..+++++|++++||.+
T Consensus 329 --~~~~~~~~~l~~~~gi~v 346 (383)
T 3kax_A 329 --LSQDERTKLLEEKGKIIV 346 (383)
T ss_dssp --CCHHHHHHHHHHTSCEEC
T ss_pred --CCHHHHHHHHHhhCCEEe
Confidence 268899999997779986
No 29
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.8e-46 Score=383.59 Aligned_cols=355 Identities=20% Similarity=0.332 Sum_probs=278.7
Q ss_pred CcccccccCCchhHHHHHHHHHHHhc---CC-----CeEEcCCCCCC---CCC----------------------hHHHH
Q 014172 68 LSPRVNAVKPSKTVAITDQATALAQA---GV-----SVIRLAAGEPD---FDT----------------------PVLIA 114 (429)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~---g~-----~~i~L~~g~~~---~~~----------------------p~~v~ 114 (429)
+++++.++.......+..++.++++. |. ++|++++|+|. ..+ |..+.
T Consensus 28 ~~~~~~~~~y~~rg~~~~~a~~~~~~~~~g~~~~f~~~i~~nig~p~~~~~~~~~~~r~~l~l~~~p~~~~~~~~P~~~~ 107 (498)
T 3ihj_A 28 MNPQVKAVEYAVRGPIVLKAGEIELELQRGIKKPFTEVIRANIGDAQAMGQQPITFLRQVMALCTYPNLLDSPSFPEDAK 107 (498)
T ss_dssp ETTEEEEEEEEECCHHHHHHHHHHHHHHTTCCCSSSSCBCCC----------CCHHHHHHHHHHHCGGGGGCSSSCHHHH
T ss_pred HHHHHHHhhhhhcCHHHHHHHHHHHHHhccCCCchhhhhhcCCcCcccccCCcchHHHHHHHHhcCccccCcccCCHHHH
Confidence 67777777655555677777777664 44 79999999982 222 55556
Q ss_pred HHHHHHHHc----CCCCCCCCCCCHHHHHHHHHHHHhhc-CCCCCCCcEEEecChHHHHHHHHHHhcCCCC----EEEEc
Q 014172 115 EAGINAIRE----GFTRYTPNAGTLELRSAICHKLKEEN-GLSYTPDQILVSNGAKQSILQAVLAVCSPGD----EVIIP 185 (429)
Q Consensus 115 ~a~~~~~~~----~~~~Y~~~~G~~~lr~~ia~~l~~~~-g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd----~Vlv~ 185 (429)
+++.+++.+ ....|++..|..++|++|++++.+.+ |+++++++|++|+|+++++..++++++++|| .|+++
T Consensus 108 ~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~ 187 (498)
T 3ihj_A 108 KRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIP 187 (498)
T ss_dssp HHHHHHHHHC----------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEE
T ss_pred HHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEe
Confidence 666777664 24679999999999999999999888 4888899999999999999999999999875 99999
Q ss_pred CCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-----CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhC
Q 014172 186 APFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-----KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 260 (429)
Q Consensus 186 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-----~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~ 260 (429)
.|+|+.|...++..|++++.++++++++|.+|+++|++++++ ++++|++++||||||.+++.+++++|+++|++|
T Consensus 188 ~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~ 267 (498)
T 3ihj_A 188 IPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEE 267 (498)
T ss_dssp ESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH
T ss_pred CCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHc
Confidence 999999999999999999999998888899999999999976 589999999999999999999999999999999
Q ss_pred CCeEEEEccCCcccccCCC-CCCccccCCC-------CCCceEEEeccChhc-ccccceeeEEE---cCHHHHHHHHHHh
Q 014172 261 PRLLVLSDEIYEHIIYAPA-THTSFASLPG-------MWERTLTVNGFSKAF-AMTGWRLGYIA---GPKHFVAACNKIQ 328 (429)
Q Consensus 261 ~~i~vi~Deay~~~~~~~~-~~~~~~~~~~-------~~~~~i~~~S~SK~~-~~~G~R~G~v~---~~~~~~~~l~~~~ 328 (429)
+++||+||+|..+.|++. .+.++..+.. ...++|+++||||.| |++|+|+||++ .++++++.+.+..
T Consensus 268 -~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~ 346 (498)
T 3ihj_A 268 -KLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLL 346 (498)
T ss_dssp -TCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHH
T ss_pred -CcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHH
Confidence 999999999999999764 4555554321 124579999999999 89999999998 6899999988776
Q ss_pred hcccCCCchHHHHHHHHHHhcCC----CChHH---HHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccC
Q 014172 329 SQFTSGASSISQKAGVAALGLGY----AGGEV---VSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG 401 (429)
Q Consensus 329 ~~~~~~~~~~~q~aa~~~l~~~~----~~~~~---~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~ 401 (429)
. ...+++.++|.++..+++... ...++ ...+++.++++++++.+.|+++||+++.+|+++||+|++++....
T Consensus 347 ~-~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~gg~~~~~~l~~p~~ 425 (498)
T 3ihj_A 347 S-VRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPRIFIPAK 425 (498)
T ss_dssp H-HSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECCCHH
T ss_pred h-ccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEecCCCeEEEEEEeccCchh
Confidence 5 556789999998888886311 01233 456788999999999999999999999999999999987642100
Q ss_pred C----cccCCCCCCChHHH-HHHHHHhCCeec
Q 014172 402 S----EAEGFGKIENSESL-CRYLLDKAQVLL 428 (429)
Q Consensus 402 ~----~~~~~~~~~~~~~~-~~~Ll~~~gV~v 428 (429)
. ...+ .+..++ +.+|++++||.+
T Consensus 426 ~~~~~~~~g----~~~~~~~~~~ll~~~gI~v 453 (498)
T 3ihj_A 426 AVEAAQAHQ----MAPDMFYCMKLLEETGICV 453 (498)
T ss_dssp HHHHHHHTT----SCHHHHHHHHHHHHHCBCC
T ss_pred hhHHHHhcC----CCcHHHHHHHHHHHCCEEE
Confidence 0 0001 134454 788888889986
No 30
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=5.4e-46 Score=366.26 Aligned_cols=315 Identities=21% Similarity=0.342 Sum_probs=283.5
Q ss_pred hcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHH
Q 014172 92 QAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 171 (429)
Q Consensus 92 ~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~ 171 (429)
..|+++|+|+.|++++++|+.+.+++.+.+.++...|++ .| .++|+++++++.+.+|..+++++|++|+|+++++..+
T Consensus 20 ~~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~~ 97 (377)
T 3fdb_A 20 RYGQGVLPLWVAESDFSTCPAVLQAITDAVQREAFGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIA 97 (377)
T ss_dssp SSCTTSEECCSSCCCSCCCHHHHHHHHHHHHTTCCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHH
T ss_pred ccCCCeeeecccCCCCCCCHHHHHHHHHHHHcCCCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHHH
Confidence 357889999999999999999999999999877778987 77 8999999999999999888899999999999999999
Q ss_pred HHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHH
Q 014172 172 VLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLD 251 (429)
Q Consensus 172 l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~ 251 (429)
+++++++||+|+++.|+|.++...++..|++++.+|++.+ +|+++++++++++++++++++|+||||.+++.++++
T Consensus 98 ~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~ 173 (377)
T 3fdb_A 98 IDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATGG----INLHDVEKGFQAGARSILLCNPYNPLGMVFAPEWLN 173 (377)
T ss_dssp HHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTS----CCHHHHHHHHHTTCCEEEEESSBTTTTBCCCHHHHH
T ss_pred HHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC----CCHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHH
Confidence 9999999999999999999999999999999999998653 899999999998899999999999999999999999
Q ss_pred HHHHHHHhCCCeEEEEccCCcccccCC-CCCCccccCCCCCCceEEEeccChhcccccceeeEEEc-CHHHHHHHHHHhh
Q 014172 252 EIARIVAKHPRLLVLSDEIYEHIIYAP-ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQS 329 (429)
Q Consensus 252 ~I~~~a~~~~~i~vi~Deay~~~~~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~-~~~~~~~l~~~~~ 329 (429)
+|+++|++| |+++|+||+|..+.+++ ....++..+.. .++++++.||||.+|++|+|+||+++ ++++++.+.....
T Consensus 174 ~l~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~-~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~ 251 (377)
T 3fdb_A 174 ELCDLAHRY-DARVLVDEIHAPLVFDGQHTVAAGVSDTA-ASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLSP 251 (377)
T ss_dssp HHHHHHHHT-TCEEEEECTTGGGBSSSCCCCGGGSCHHH-HHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHHSCH
T ss_pred HHHHHHHHc-CCEEEEEcccchhhcCCCCCcccHHHccC-CCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHHHHHH
Confidence 999999999 99999999999998877 55555555433 57889999999999999999999886 7889999888766
Q ss_pred cccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc-CCCceeecCCceEEEEEecCCccCCcccCCC
Q 014172 330 QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFG 408 (429)
Q Consensus 330 ~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~ 408 (429)
..+.+++.++|.++.++++. .+++++++++.++++++.+.+.|++ +||+++..|++++++|++++..
T Consensus 252 ~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~--------- 319 (377)
T 3fdb_A 252 VIKDGASTLGLIAAEAAYRY---GTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQATYLMWIDFRDT--------- 319 (377)
T ss_dssp HHHCCCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCSBCSEEEEECTTS---------
T ss_pred hhcCCCCHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCeeEEEEEECccc---------
Confidence 66678999999999999987 4788999999999999999999998 7899999999999999999853
Q ss_pred CCCChHHHHHHHHHhCCeec
Q 014172 409 KIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 409 ~~~~~~~~~~~Ll~~~gV~v 428 (429)
..+.+++++|++++||.+
T Consensus 320 --~~~~~~~~~l~~~~gi~v 337 (377)
T 3fdb_A 320 --TIEGSPSEFFIEKAKVAM 337 (377)
T ss_dssp --CCCSCHHHHHHHHHCEEC
T ss_pred --CCCHHHHHHHHHhCCEEe
Confidence 123578899998889976
No 31
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=4.5e-46 Score=366.89 Aligned_cols=324 Identities=21% Similarity=0.326 Sum_probs=282.9
Q ss_pred cCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCC
Q 014172 75 VKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYT 154 (429)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~ 154 (429)
++++.+.++.+..+++...| ++|+|+.|++++++|+.+.+++.+.+ .....|++..|..++|+++++++.+.+|.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~g-~~i~l~~~~~~~~~~~~v~~a~~~~~-~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~ 81 (376)
T 3ezs_A 4 FEPYPFERLRALLKEITPKK-RGLDLGIGEPQFETPKFIQDALKNHT-HSLNIYPKSAFEESLRAAQRGFFKRRFKIELK 81 (376)
T ss_dssp CCCCHHHHHHHHHTTCCCSS-CCCBCSSCCCCSCCCHHHHHHHHTTG-GGGGSCCCTTCCHHHHHHHHHHHHHHHSCCCC
T ss_pred CCcchHHHHHHHHHhhhccC-CEEEeCCCCCCCCCCHHHHHHHHHhh-hhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence 46777778777776665567 89999999999999999999998876 34578988889999999999999999998778
Q ss_pred CCcEEEecChHHHHHHHHHHhcCC--CCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEE
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSP--GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLL 232 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~--gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i 232 (429)
+++|++|+|+++++..++++++++ ||+|+++.|+|.++...++..|++++.++++.++++ ++ .+++.+.+++++|
T Consensus 82 ~~~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~-~l~~~~~~~~~~v 158 (376)
T 3ezs_A 82 ENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDF--TP-SLNEKELQEVDLV 158 (376)
T ss_dssp GGGEEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTS--CC-CCCHHHHHHCSEE
T ss_pred HHHEEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCc--ch-hHHhhhccCCCEE
Confidence 999999999999999999999999 999999999999999999999999999999766554 33 6666677789999
Q ss_pred EEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCC-----CCCceEEEeccChhcccc
Q 014172 233 ILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG-----MWERTLTVNGFSKAFAMT 307 (429)
Q Consensus 233 ~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~-----~~~~~i~~~S~SK~~~~~ 307 (429)
++++||||||.+++.+++++|+++|++| |+++|+||+|.++.+++ ...++..... ..++++++.||||.+|++
T Consensus 159 ~~~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 236 (376)
T 3ezs_A 159 ILNSPNNPTGRTLSLEELISWVKLALKH-DFILINDECYSEIYENT-PPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAP 236 (376)
T ss_dssp EECSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTTTCBSSS-CCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCG
T ss_pred EEcCCCCCcCCCCCHHHHHHHHHHHHHc-CcEEEEEccchhhccCC-CCCCHHHccccccccccCcEEEEecchhccCCc
Confidence 9999999999999999999999999999 99999999999998876 3334433211 368899999999999999
Q ss_pred cceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCC
Q 014172 308 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 387 (429)
Q Consensus 308 G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~ 387 (429)
|+|+||+++++++++.+.........+++.+.|.++.++++. .+++++.++.++++++.+.+.|+ ++. .|.
T Consensus 237 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~l~---~~~--~~~ 307 (376)
T 3ezs_A 237 GLRSGFIAGDSRLLEKYKAFRAYLGYTSANAIQKASEAAWLD----DRHAEFFRNIYANNLKLARKIFK---NTL--IYP 307 (376)
T ss_dssp GGCCEEEEECHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHC----SHHHHHHHHHHHHHHHHHHHHST---TCC--CCS
T ss_pred cceeEEEeeCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhC----cHHHHHHHHHHHHHHHHHHHHhc---CCC--CCC
Confidence 999999999999999999887777778999999999999986 56789999999999999999997 554 688
Q ss_pred ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 388 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+++|+|++++ +..+++++|++++||.+
T Consensus 308 ~~~~~~~~~~--------------~~~~~~~~l~~~~gi~v 334 (376)
T 3ezs_A 308 YSFYVYLPVQ--------------NGENFAKTLYQNEGIIT 334 (376)
T ss_dssp BSSEEEEECS--------------CHHHHHHHHHHHHCCBC
T ss_pred cceEEEEECC--------------CHHHHHHHHHHhCCEEE
Confidence 9999999986 47799999998669876
No 32
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=1.3e-45 Score=371.04 Aligned_cols=336 Identities=19% Similarity=0.221 Sum_probs=291.4
Q ss_pred ccCCchhHHHHHHHHHHH-hcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHHHhhcCC
Q 014172 74 AVKPSKTVAITDQATALA-QAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGF-TRYTPNAGTLELRSAICHKLKEENGL 151 (429)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~-~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~l~~~~g~ 151 (429)
.++++.++.+......+. ..|+++|+|+.|++++++|+.+.+++.+.+.++. .+|++..|..++|+++++++.+.+|+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~ 101 (437)
T 3g0t_A 22 DLGMASIRDLVALVTNLEKATGTKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNI 101 (437)
T ss_dssp CGGGCCHHHHHHHHHHHHHHHTCCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCC
T ss_pred cCCCcHHHHHHHHHHHHHHhcCCCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCC
Confidence 344555666666665543 4578899999999999999999999999987665 78988889999999999999999999
Q ss_pred CCCCCcEEEecChHHHHHHHHHHhc--CCCC--EEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhc-c
Q 014172 152 SYTPDQILVSNGAKQSILQAVLAVC--SPGD--EVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL-T 226 (429)
Q Consensus 152 ~~~~~~i~~t~G~~~al~~~l~~l~--~~gd--~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l-~ 226 (429)
++++++|++|+|+++++.+++++++ ++|| +|+++.|+|.++...++..|++++.++++ ++++.+|++.|++++ +
T Consensus 102 ~~~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~ 180 (437)
T 3g0t_A 102 DIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLF-EYRGEKLREKLESYLQT 180 (437)
T ss_dssp CCCGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGG-GGCTTHHHHHHHHHHTT
T ss_pred CCCcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeec-CCCCccCHHHHHHHHhc
Confidence 8889999999999999999999999 9999 99999999999999999999999999987 456778999999999 7
Q ss_pred cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCC----cc-ccCCCCCCceEEEeccC
Q 014172 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT----SF-ASLPGMWERTLTVNGFS 301 (429)
Q Consensus 227 ~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~----~~-~~~~~~~~~~i~~~S~S 301 (429)
+++++|++++||||||.+++.+++++|+++|++| |++||+||+|.++.|++.... ++ ..+....++++++.|||
T Consensus 181 ~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 259 (437)
T 3g0t_A 181 GQFCSIIYSNPNNPTWQCMTDEELRIIGELATKH-DVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSS 259 (437)
T ss_dssp TCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEEST
T ss_pred CCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHC-CcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCc
Confidence 7899999999999999999999999999999999 999999999999888742211 11 44443468899999999
Q ss_pred hhcccccceeeEEEcCHHHHH-H-----------------HHHHhhcccCCCchHHHHHHHHHHhcCCCChHH---HHHH
Q 014172 302 KAFAMTGWRLGYIAGPKHFVA-A-----------------CNKIQSQFTSGASSISQKAGVAALGLGYAGGEV---VSKM 360 (429)
Q Consensus 302 K~~~~~G~R~G~v~~~~~~~~-~-----------------l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~---~~~~ 360 (429)
|.+|++|+|+||+++++++++ . +.........+++.++|.++..+|+. ...+ ++++
T Consensus 260 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~ 336 (437)
T 3g0t_A 260 KAFSYAGQRIGVLMISGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKA---CNDGEYNFRDS 336 (437)
T ss_dssp TTTSCGGGCCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHH---HHTTSCCHHHH
T ss_pred cCCCCccceeEEEEECHHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhC---cHhHHHHHHHH
Confidence 999999999999999999988 7 76666666678999999999999986 2333 8899
Q ss_pred HHHHHHHHHHHHHHhccCCCceee------cC-CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 361 VKAFRERRDFLVKSFGELEGVKMS------EP-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 361 ~~~~~~~r~~l~~~L~~l~g~~~~------~p-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+++++++++.+.+.|+++ |+++. .| .+++|+|++++. .+..+++++|+++ ||.+
T Consensus 337 ~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~l~~~L~~~-gi~v 397 (437)
T 3g0t_A 337 VIEYGRKARIMKKMFLDN-GFNIVYDKDGNEPLADGFYFTVGYKG------------MDSSKLIEKFVRY-GMCA 397 (437)
T ss_dssp HHHHHHHHHHHHHHHHTT-TEEESSCEETTEECCSSSEEEEEETT------------CCHHHHHHHHHHT-TEEC
T ss_pred HHHHHHHHHHHHHHHHHc-CCEEeccccCCCCCceeEEEEEecCC------------CCHHHHHHHHHHc-CeEE
Confidence 999999999999999999 88887 34 899999999983 2788999999876 9876
No 33
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=1.3e-45 Score=367.14 Aligned_cols=319 Identities=23% Similarity=0.335 Sum_probs=285.2
Q ss_pred CeEEcCCCCCC-CCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCC-CcEEEecChHHHHHHHH
Q 014172 96 SVIRLAAGEPD-FDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLSYTP-DQILVSNGAKQSILQAV 172 (429)
Q Consensus 96 ~~i~L~~g~~~-~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-~~i~~t~G~~~al~~~l 172 (429)
.+|+|+.|++. +++|+.+++++.+.+.+. ...|++..|..++++++++++.+.+|.++++ ++|++|+|+++++..++
T Consensus 40 ~~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~ 119 (407)
T 3nra_A 40 RPVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAV 119 (407)
T ss_dssp CCEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHH
T ss_pred ceeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHH
Confidence 38999999866 778899999999988753 3468888899999999999999999987766 79999999999999999
Q ss_pred HHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCC----CCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHH
Q 014172 173 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRI----SENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKN 248 (429)
Q Consensus 173 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~----~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~ 248 (429)
.+++++||+|+++.|+|.++...++..|++++.++++. ++++.+|++.|++++++++++|++++||||||.+++.+
T Consensus 120 ~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~ 199 (407)
T 3nra_A 120 AATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAE 199 (407)
T ss_dssp HTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCCCHH
T ss_pred HHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCcccCHH
Confidence 99999999999999999999999999999999999843 35677999999999988999999999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCC-CCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHH
Q 014172 249 LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP-GMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI 327 (429)
Q Consensus 249 ~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~ 327 (429)
++++|+++|++| |+++|+||+|..+.|++....++..+. ...++++++.||||.+|++|+|+||+++++++++.+...
T Consensus 200 ~l~~i~~~~~~~-~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~ 278 (407)
T 3nra_A 200 EIGQIAALAARY-GATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRAIIARMEKL 278 (407)
T ss_dssp HHHHHHHHHHHH-TCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHHHHHHHHHH
Confidence 999999999999 999999999999999877666776665 457899999999999999999999999999999999988
Q ss_pred hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCC
Q 014172 328 QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGF 407 (429)
Q Consensus 328 ~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~ 407 (429)
...+..+++.+.|.++..+|+. ..+++++.+++++++++.+.+.|++++|+++..|++++|+|++++.. +
T Consensus 279 ~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~-~------ 348 (407)
T 3nra_A 279 QAIVSLRAAGYSQAVLRGWFDE---APGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPKL-A------ 348 (407)
T ss_dssp HHHHTSSSCHHHHGGGGGTTCC---CTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCCB-S------
T ss_pred HhhhccCCChHHHHHHHHHHhc---cchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCCC-C------
Confidence 8888888889999888888875 45788899999999999999999999899998899999999999752 0
Q ss_pred CCCCChHHHHHHHHHhCCeec
Q 014172 408 GKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 408 ~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+..+++++|++++||.+
T Consensus 349 ---~~~~~~~~~l~~~~gi~v 366 (407)
T 3nra_A 349 ---VAPAEFVKILRLQAGVVV 366 (407)
T ss_dssp ---SCHHHHHHHHHHHHCEEC
T ss_pred ---CCHHHHHHHHHHhCCEEE
Confidence 368899999988779976
No 34
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=6.8e-45 Score=359.93 Aligned_cols=320 Identities=18% Similarity=0.285 Sum_probs=284.9
Q ss_pred cCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHH
Q 014172 93 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 172 (429)
Q Consensus 93 ~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l 172 (429)
.|+++|+|+.|++++++|+.+.+++.+.+.+....|++. ..++++++++++.+.+|.++++++|++|+|+++++..++
T Consensus 25 ~g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~ 102 (391)
T 3dzz_A 25 LKEKELPMWIAEMDFKIAPEIMASMEEKLKVAAFGYESV--PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMV 102 (391)
T ss_dssp CCTTCEECCSSCCSSCCCHHHHHHHHHHHTTCCCCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHH
T ss_pred cCCCceeccccCCCCCCCHHHHHHHHHHHhcCcCCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHH
Confidence 456899999999999999999999999988766778664 699999999999999998888999999999999999999
Q ss_pred HHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCC-CCCCCCCCHHHHHhhcc-cCCcEEEEcCCCCCccCCCCHHHH
Q 014172 173 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR-ISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLL 250 (429)
Q Consensus 173 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~~~d~e~l~~~l~-~~~~~i~l~~p~NPtG~~~~~~~l 250 (429)
.+++++||+|+++.|+|.++...++..|++++.+|++ .+++|.+|++.|+++++ +++++|++++|+||||.+++.+++
T Consensus 103 ~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l 182 (391)
T 3dzz_A 103 RQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEV 182 (391)
T ss_dssp HHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHH
T ss_pred HHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHHHH
Confidence 9999999999999999999999999999999999986 34557789999999998 789999999999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCC-CCceEEEeccChhcccccceeeEEEcC-HHHHHHHHHHh
Q 014172 251 DEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM-WERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQ 328 (429)
Q Consensus 251 ~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~R~G~v~~~-~~~~~~l~~~~ 328 (429)
++|+++|++| |+++|+||+|.++.+.+....++..+... .++++++.||||.+|++|+|+||++++ +++++.+....
T Consensus 183 ~~i~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~ 261 (391)
T 3dzz_A 183 KRIAELCAKH-QVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEESF 261 (391)
T ss_dssp HHHHHHHHHT-TCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHHH
T ss_pred HHHHHHHHHC-CCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHHH
Confidence 9999999999 99999999999999887666677666532 478999999999999999999999997 89999888765
Q ss_pred hc-ccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc-CCCceeecCCceEEEEEecCCccCCcccC
Q 014172 329 SQ-FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEG 406 (429)
Q Consensus 329 ~~-~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-l~g~~~~~p~~~~~~~~~l~~~~~~~~~~ 406 (429)
.. ...+++.+.+.++.+++.. ..+++++.++.++++++++.+.|++ ++|+++..|++++++|++++.. +
T Consensus 262 ~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~----- 332 (391)
T 3dzz_A 262 FLAGIGEPNLLAIPAAIAAYEE---GHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSNASYLAWVDISAL-G----- 332 (391)
T ss_dssp HHHTCSSCCTTHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCCBSSEEEEECGGG-C-----
T ss_pred HhhccCCCCHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEeccCceEEEEEehhhc-C-----
Confidence 43 3356888999999999987 5788999999999999999999999 8999999999999999999752 0
Q ss_pred CCCCCChHHHHHHHHHhCCeec
Q 014172 407 FGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 407 ~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+..+++++|++++||.+
T Consensus 333 ----~~~~~~~~~l~~~~gi~v 350 (391)
T 3dzz_A 333 ----MNAEDFCKYLREKTGLII 350 (391)
T ss_dssp ----SCHHHHHHHHHHHHCEEC
T ss_pred ----CCHHHHHHHHHHhCCEEE
Confidence 268899999986669976
No 35
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=1.7e-45 Score=368.36 Aligned_cols=341 Identities=16% Similarity=0.217 Sum_probs=278.7
Q ss_pred cccccccCCchhHHHHHHHHHHHhc--CCCeEEcCCCCC-----CCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHH
Q 014172 69 SPRVNAVKPSKTVAITDQATALAQA--GVSVIRLAAGEP-----DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAI 141 (429)
Q Consensus 69 s~~~~~~~~~~~~~~~~~~~~~~~~--g~~~i~L~~g~~-----~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~i 141 (429)
.++.....++.+..+.+.+++.... |.++|+|+.|+| ++++|+.+.+++.+....+...|++..|..+||+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~i 89 (418)
T 3rq1_A 10 KHAKGKKLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEHVGYAPIAGIPDFLCAA 89 (418)
T ss_dssp TTTTTCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHHHSCCCTTCCHHHHHHH
T ss_pred hhcCCCCCCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhcccccCCCCCCCChHHHHHHH
Confidence 5555666677777887777777665 668999999987 777788888887765433446899989999999999
Q ss_pred HHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHH
Q 014172 142 CHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVL 221 (429)
Q Consensus 142 a~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l 221 (429)
++++...++.. .+++|++|+|+++++..++++++++||+|++++|+|.+|...++..|++++.+|+++++ +.+|++.+
T Consensus 90 a~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~~~d~~~l 167 (418)
T 3rq1_A 90 EKECFGNFRPE-GHIRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEH-NNFNHEAF 167 (418)
T ss_dssp HHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTT-SSBCHHHH
T ss_pred HHHHhcccCcc-ccccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCC-CCcCHHHH
Confidence 99997766532 23499999999999999999999999999999999999999999999999999986544 77999999
Q ss_pred Hhhccc----CCc-EEEEcCC-CCCccCCCCHHHHHHHHHHHH------hCCCeEEEEccCCcccccCCCCCCcccc-CC
Q 014172 222 ESKLTE----KSR-LLILCSP-SNPTGSVYPKNLLDEIARIVA------KHPRLLVLSDEIYEHIIYAPATHTSFAS-LP 288 (429)
Q Consensus 222 ~~~l~~----~~~-~i~l~~p-~NPtG~~~~~~~l~~I~~~a~------~~~~i~vi~Deay~~~~~~~~~~~~~~~-~~ 288 (429)
++++++ +++ ++++++| |||||.+++.+++++|+++|+ +| |++||+||+|.++.+++....++.. ..
T Consensus 168 ~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~-~~~li~De~y~~~~~~~~~~~~~~~~~~ 246 (418)
T 3rq1_A 168 QNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRN-NVIIGIDVAYLDYSGEKDEVRAFFNKFS 246 (418)
T ss_dssp HHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSC-EEEEEEECTTGGGSSCHHHHHGGGGGGT
T ss_pred HHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCC-CeEEEEecccccccCChHHHHHHHHHHH
Confidence 999875 676 7788999 999999999999999999999 89 9999999999998876543333332 33
Q ss_pred CCCCc--eEEEeccChhcccccceeeEEEc---CHHHHHHHHHHhhcc----cCCCchHHHHHHHHHHhcCCC---ChHH
Q 014172 289 GMWER--TLTVNGFSKAFAMTGWRLGYIAG---PKHFVAACNKIQSQF----TSGASSISQKAGVAALGLGYA---GGEV 356 (429)
Q Consensus 289 ~~~~~--~i~~~S~SK~~~~~G~R~G~v~~---~~~~~~~l~~~~~~~----~~~~~~~~q~aa~~~l~~~~~---~~~~ 356 (429)
...++ +++++||||.+|++|+|+||+++ ++++++.+....... ..+++.++|.++..+|++... ..+.
T Consensus 247 ~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 326 (418)
T 3rq1_A 247 HLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAE 326 (418)
T ss_dssp TCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred hcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHH
Confidence 33345 58899999999999999999998 899999887764432 245889999999999975210 0123
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 357 VSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 357 ~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++++++.++++++++.+.|+++ |+++.+|+++||+|++++ +..++++.| +++||.+
T Consensus 327 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~--------------~~~~~~~~l-~~~gi~v 382 (418)
T 3rq1_A 327 RNCYYQLIRDRADIFKQEAAQV-GLPMLPYRGGFFITIPTD--------------SANAICEEL-KKEHIYV 382 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TCCCCCCCSSSEEEEECT--------------THHHHHHHH-HHTTEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCceEEEEcCCC--------------CHHHHHHHH-HhCCEEE
Confidence 4467789999999999999998 899999999999999874 577899876 4569976
No 36
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=8.5e-45 Score=359.23 Aligned_cols=318 Identities=23% Similarity=0.395 Sum_probs=283.3
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHH
Q 014172 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (429)
Q Consensus 94 g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~ 173 (429)
+.++|+|+.|++++++|+.+.+++.+.+.+....|++ +..++++++++++.+.+|..+++++|++|+|+++++..++.
T Consensus 31 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~ 108 (391)
T 4dq6_A 31 TNDLLPMWVADMDFKAAPCIIDSLKNRLEQEIYGYTT--RPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLIN 108 (391)
T ss_dssp CSCSEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHH
T ss_pred CCCceeccccCCCCCCCHHHHHHHHHHHhCCCCCCCC--CCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHHHH
Confidence 4679999999999999999999999998776667755 67999999999999999987888999999999999999999
Q ss_pred HhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCC--CCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHH
Q 014172 174 AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR--ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLD 251 (429)
Q Consensus 174 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~ 251 (429)
+++++||+|+++.|+|.++...++..|++++.+|++ .+++|.+|++++++++++ +++|++++|+||||.+++.++++
T Consensus 109 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l~ 187 (391)
T 4dq6_A 109 ELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVWTKDELK 187 (391)
T ss_dssp HHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCCCHHHHH
T ss_pred HhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCcCHHHHH
Confidence 999999999999999999999999999999999987 455678999999999988 99999999999999999999999
Q ss_pred HHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCC-CCceEEEeccChhcccccceeeEEEcCH-HHHHHHHHHhh
Q 014172 252 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM-WERTLTVNGFSKAFAMTGWRLGYIAGPK-HFVAACNKIQS 329 (429)
Q Consensus 252 ~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~R~G~v~~~~-~~~~~l~~~~~ 329 (429)
+|+++|++| |+++|+||+|.++.+++....++..+... .++++++.||||.+|++|+|+||+++++ ++++.+.....
T Consensus 188 ~i~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~ 266 (391)
T 4dq6_A 188 KLGDICLKH-NVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFT 266 (391)
T ss_dssp HHHHHHHHT-TCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHc-CCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHHHHHHHHHHH
Confidence 999999999 99999999999999887666666665432 4788999999999999999999999875 88888887754
Q ss_pred cc-cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc-CCCceeecCCceEEEEEecCCccCCcccCC
Q 014172 330 QF-TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEGF 407 (429)
Q Consensus 330 ~~-~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~ 407 (429)
.+ ..+++.+++.++.+++.. .++++++.+++++++++.+.+.|++ +||+++..+++++++|++++.. +
T Consensus 267 ~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~------ 336 (391)
T 4dq6_A 267 RIDIKRNNCFSLVATEASYNN---GESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSAL-G------ 336 (391)
T ss_dssp HTTCCCCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCSBSSEEEEECGGG-C------
T ss_pred hhcCCCCCHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEecCCCccEEEEEEhhhc-C------
Confidence 44 346888999999999986 4788999999999999999999998 7899999999999999999742 0
Q ss_pred CCCCChHHHHHHHHHhCCeec
Q 014172 408 GKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 408 ~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+..+++++|++++||.+
T Consensus 337 ---~~~~~~~~~l~~~~gi~v 354 (391)
T 4dq6_A 337 ---LSDEELESILVQKGKVAL 354 (391)
T ss_dssp ---CCHHHHHHHHHHTTCEEC
T ss_pred ---CCHHHHHHHHHHhCCEEe
Confidence 378899999998879976
No 37
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=1.9e-45 Score=367.58 Aligned_cols=352 Identities=24% Similarity=0.397 Sum_probs=284.6
Q ss_pred ccccCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCC----CCCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHH
Q 014172 64 VDVSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP----DFDTPVLIAEAGINAIREG-FTRYTPNAGTLELR 138 (429)
Q Consensus 64 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~----~~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr 138 (429)
|++.+|...... ++.++.+...+.... .++++|+|+.|.| ++++|+.+.+++.+.+... ...|++..|..++|
T Consensus 4 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr 81 (416)
T 1bw0_A 4 WDVSMSNHAGLV-FNPIRTVSDNAKPSP-SPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAR 81 (416)
T ss_dssp CCCCCCHHHHTC-CCHHHHHHHTCCCCC-SCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHH
T ss_pred cccCchhhhhcc-ccHHHHHHHHHHHhh-cCCCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHH
Confidence 777766644443 344444443332221 2256899999997 5677899999999988764 46798878999999
Q ss_pred HHHHHHHHh------hcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCC
Q 014172 139 SAICHKLKE------ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISE 212 (429)
Q Consensus 139 ~~ia~~l~~------~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~ 212 (429)
+++++++.+ .+|.++++++|++|+|+++++..++++++++||+|+++.|+|+++...++..|++++.+++++++
T Consensus 82 ~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~ 161 (416)
T 1bw0_A 82 EAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPEN 161 (416)
T ss_dssp HHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGG
T ss_pred HHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCccc
Confidence 999999983 25666788999999999999999999999999999999999999999999999999999987655
Q ss_pred CCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCC----CCCccccCC
Q 014172 213 NFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA----THTSFASLP 288 (429)
Q Consensus 213 ~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~----~~~~~~~~~ 288 (429)
++.+|++.|+++++++++++++++|+||||.+++.+++++|+++|++| |++||+||+|.++.|++. ...++..+.
T Consensus 162 ~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~ 240 (416)
T 1bw0_A 162 DWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEEL-RLPLFSDEIYAGMVFKGKDPNATFTSVADFE 240 (416)
T ss_dssp TTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCCEEEECTTTTCBCCSSCTTCCCCCTTSSC
T ss_pred CCCCCHHHHHHHhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHc-CCEEEEEccccccccCCCCCCCCccCHHHcc
Confidence 678999999999988899999999999999999999999999999999 999999999999888765 344555554
Q ss_pred CCCCceEEEeccChhcccccceeeEEEcCHH--HHHHHH----HHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHH
Q 014172 289 GMWERTLTVNGFSKAFAMTGWRLGYIAGPKH--FVAACN----KIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 362 (429)
Q Consensus 289 ~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~--~~~~l~----~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~ 362 (429)
. .+++++++||||.|+++|+|+||++++++ +++.+. ... ....+++.+.|.++.++|+.. ..+++++.++
T Consensus 241 ~-~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~ 316 (416)
T 1bw0_A 241 T-TVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVG-MLVCGPCTVVQAALGEALLNT--PQEHLDQIVA 316 (416)
T ss_dssp C-SCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHHHH-HHHTCSCHHHHHHHHHHHHSS--CHHHHHHHHH
T ss_pred C-CCcEEEEecchhhCCCCCceEEEEEeeCchhhHHHHHHHHHHHh-ccccCCCcHHHHHHHHHHhcc--cHHHHHHHHH
Confidence 3 45789999999999999999999998663 444333 221 124568899999999999842 2678899999
Q ss_pred HHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 363 AFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 363 ~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+++++++++.+.|++++|+++..|++++|+|++++... +....+..+++++|++++||.+
T Consensus 317 ~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~gi~v 376 (416)
T 1bw0_A 317 KIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRIDLEK------YRDIKTDVEFFEKLLEEENVQV 376 (416)
T ss_dssp HHHHHHHHHHHHHTTSTTEEECCCCBTTEEEEEECGGG------BSSCCSHHHHHHHHHHHHCEEC
T ss_pred HHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCHHH------cCCCCCHHHHHHHHHHHCCEEE
Confidence 99999999999999988999888889999999886310 0001267889999987679976
No 38
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=4.5e-45 Score=373.66 Aligned_cols=359 Identities=20% Similarity=0.292 Sum_probs=284.4
Q ss_pred CcccccccCCchhHHHHHHHHHHHhc-----CC----CeEEcCCCCCC---CC--------------------------C
Q 014172 68 LSPRVNAVKPSKTVAITDQATALAQA-----GV----SVIRLAAGEPD---FD--------------------------T 109 (429)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~-----g~----~~i~L~~g~~~---~~--------------------------~ 109 (429)
+++++.++.......+..+++++++. |. ++|++++|+|. .. .
T Consensus 28 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~iG~~~~~~~~p~~~~~~~~~~~~~p~~i~~~~~~~~~ 107 (500)
T 3tcm_A 28 LNPKVLKCEYAVRGEIVIHAQRLQEQLKTQPGSLPFDEILYCNIGNPQSLGQQPVTFFREVLALCDHPDLLQREEIKTLF 107 (500)
T ss_dssp SCHHHHHCCCGGGSHHHHHHHHHHHHHHHSTTSSSSSSCEECSSCCGGGTTCCCCHHHHHHHHHHHSGGGGGCTTHHHHS
T ss_pred hCHHHHhhhhHhcCHHHHHHHHHHHHHhhCCCCCCHHHhhhhcCcChhhcCCCCCcHHHHHHHhhcCcccccCCCCcccC
Confidence 44444444433333555666665555 54 67888888761 11 3
Q ss_pred hHHHHHHHHHHHHc----CCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhc-CCCCEEEE
Q 014172 110 PVLIAEAGINAIRE----GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC-SPGDEVII 184 (429)
Q Consensus 110 p~~v~~a~~~~~~~----~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~-~~gd~Vlv 184 (429)
|..+++++.+.+.. ....|++..|..++|+++++++.+.+|.++++++|++|+|+++++..++.+++ ++||+|++
T Consensus 108 p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 187 (500)
T 3tcm_A 108 SADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILV 187 (500)
T ss_dssp CHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEE
T ss_pred CHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEE
Confidence 45566666777655 35689999999999999999999999988899999999999999999999998 89999999
Q ss_pred cCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------CCcEEEEcCCCCCccCCCCHHHHHHHHHHHH
Q 014172 185 PAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVA 258 (429)
Q Consensus 185 ~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~ 258 (429)
+.|+|+.|...++..|++++.++++.+++|.+|++.|++++++ ++++|++++||||||.+++.+++++|+++|+
T Consensus 188 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~ 267 (500)
T 3tcm_A 188 PIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCK 267 (500)
T ss_dssp EESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred eCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHH
Confidence 9999999999999999999999998877889999999999976 7899999999999999999999999999999
Q ss_pred hCCCeEEEEccCCcccccCCC-CCCcccc----CC--CCCCceEEEeccChhc-ccccceeeEEEc---CHHHHHHHHHH
Q 014172 259 KHPRLLVLSDEIYEHIIYAPA-THTSFAS----LP--GMWERTLTVNGFSKAF-AMTGWRLGYIAG---PKHFVAACNKI 327 (429)
Q Consensus 259 ~~~~i~vi~Deay~~~~~~~~-~~~~~~~----~~--~~~~~~i~~~S~SK~~-~~~G~R~G~v~~---~~~~~~~l~~~ 327 (429)
+| +++||+||+|..+.|++. ...++.. +. ....++++++||||.| |++|+|+||+++ ++++++.+.+.
T Consensus 268 ~~-~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~ 346 (500)
T 3tcm_A 268 NE-GLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKI 346 (500)
T ss_dssp HH-TCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHH
T ss_pred Hc-CCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHH
Confidence 99 999999999999999653 4445432 21 1234689999999999 899999999998 89999998877
Q ss_pred hhcccCCCchHHHHHHHHHHhcCCC-------ChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCcc
Q 014172 328 QSQFTSGASSISQKAGVAALGLGYA-------GGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYY 400 (429)
Q Consensus 328 ~~~~~~~~~~~~q~aa~~~l~~~~~-------~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~ 400 (429)
.. ...+++.++|.++..++..... ..++++.+++.++++++++.+.|++++|+++.+|+++||+|+++.-..
T Consensus 347 ~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~lp~ 425 (500)
T 3tcm_A 347 AS-VNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQICLPQ 425 (500)
T ss_dssp HH-TTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBTTEECCEECCCH
T ss_pred Hh-cccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEecCCeEEEEeeeecCch
Confidence 64 5667899999999998874210 124567788899999999999999999999999999999997653110
Q ss_pred CC-cccCCCCCCChHHHHHHHHHhCCeec
Q 014172 401 GS-EAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 401 ~~-~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.. ......+..+...++.++++++||++
T Consensus 426 ~~~~~~~~~g~~~~~~~~~~ll~~~gI~v 454 (500)
T 3tcm_A 426 KAIEAAKAANKAPDAFYALRLLESTGIVV 454 (500)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHHHCEEC
T ss_pred hhHHHHHhcCCCcHHHHHHHHHHHCCEEE
Confidence 00 00000001134556778888889986
No 39
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=7.7e-45 Score=365.16 Aligned_cols=338 Identities=24% Similarity=0.399 Sum_probs=285.0
Q ss_pred ccCcccccccCC-chhHHHHHHHHHHH--hcCCCeEEcCCCCCCCCChHHHHHHHHHHHH-----cCCCCCCCCCCCHHH
Q 014172 66 VSLSPRVNAVKP-SKTVAITDQATALA--QAGVSVIRLAAGEPDFDTPVLIAEAGINAIR-----EGFTRYTPNAGTLEL 137 (429)
Q Consensus 66 ~~~s~~~~~~~~-~~~~~~~~~~~~~~--~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~-----~~~~~Y~~~~G~~~l 137 (429)
+.++++++.+++ +.+..+.++..... ..++++|+|+.|++++++|+.+.+++.+++. .+...|++..|..+|
T Consensus 24 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l 103 (432)
T 3ei9_A 24 VSRNSNMSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPL 103 (432)
T ss_dssp CCCCHHHHHCCSSCHHHHHHHHHHHHHHHCTTCCCEECSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHH
T ss_pred cccChHHHhCCCCccHHHHHHHHHhhhhcCCCCCeEEccCCCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHH
Confidence 457788888887 46666655544332 2456899999999999999999999999887 345689888899999
Q ss_pred HHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCC------------EEEE
Q 014172 138 RSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA------------TPVI 205 (429)
Q Consensus 138 r~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~------------~~~~ 205 (429)
++++++++.+ ++.+++++|++|+|+++++.. +..++++||.|++++|+|.++...++..|. +++.
T Consensus 104 ~~~ia~~~~~--~~~~~~~~i~~t~G~~~al~~-l~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 180 (432)
T 3ei9_A 104 RAAIAKTFYG--GLGIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEY 180 (432)
T ss_dssp HHHHHHHHHT--TTTCCGGGEEEESCHHHHHHH-HHHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEE
T ss_pred HHHHHHHHHc--cCCCCcceEEECCChHHHHHH-HHHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEE
Confidence 9999999974 555778999999999999996 578889999999999999999999998884 6788
Q ss_pred ecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccc
Q 014172 206 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (429)
Q Consensus 206 v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~ 285 (429)
++++.++++..|++. .+++++|++++||||||.+++.+++++|+++|++| |++||+||+|.++.+++. ..++.
T Consensus 181 ~~~~~~~~~~~~l~~-----~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~-~~~li~Dea~~~~~~~~~-~~~~~ 253 (432)
T 3ei9_A 181 MRCTPENGFFPDLST-----VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKN-GSIIVYDSAYAMYMSDDN-PRSIF 253 (432)
T ss_dssp EECCGGGTTSCCGGG-----CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTGGGCCSSC-CSSGG
T ss_pred eccCcccCCcCChhh-----CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHc-CcEEEEccchHhhccCCC-CCChh
Confidence 888766666666543 35789999999999999999999999999999999 999999999999888754 34555
Q ss_pred cCCCCCCceEEEeccChhcccccceeeEEEcCHHH--------HHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHH
Q 014172 286 SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF--------VAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVV 357 (429)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~--------~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~ 357 (429)
.+....+++++++||||.||++|+|+||+++++++ ++.+.+.......+++.++|.++.+++... ..+++
T Consensus 254 ~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~ 331 (432)
T 3ei9_A 254 EIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPE--GLEAM 331 (432)
T ss_dssp GSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHH--HHHHH
T ss_pred hcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcc--cHHHH
Confidence 66555688999999999999999999999999887 777777766666678999999999888631 24678
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 358 SKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 358 ~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+++++.++++++++.+.|+++ |+++..+.+++|+|++++.. ++.+++.+|++++||.+
T Consensus 332 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~------------~~~~~~~~ll~~~gv~v 389 (432)
T 3ei9_A 332 HKVIGFYKENTNIIIDTFTSL-GYDVYGGKNAPYVWVHFPNQ------------SSWDVFAEILEKTHVVT 389 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCCEEECSSSSEEEEECTTS------------CHHHHHHHHHHHHCEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CceecCCCcceEEEEECCCC------------CHHHHHHHHHHHCCEEE
Confidence 999999999999999999998 89888888899999999842 68899999999889986
No 40
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=7.4e-45 Score=361.14 Aligned_cols=318 Identities=22% Similarity=0.337 Sum_probs=278.7
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 174 (429)
+++|+|+.|++++++|+.+.+++.+.+......|++. ..++|+++++++.+.+|+++++++|++|+|+++++.+++++
T Consensus 31 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~ 108 (399)
T 1c7n_A 31 NEVVPLSVADMEFKNPPELIEGLKKYLDETVLGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVRE 108 (399)
T ss_dssp TTCCCCCSSSCSSCCCHHHHHHHHHHHHHCCCSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHH
T ss_pred CCceeeeecCCCCCCCHHHHHHHHHHHhcCCCCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHH
Confidence 3799999999998889999999999987666778653 89999999999998889777889999999999999999999
Q ss_pred hcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCC-CCCCCCHHHHHhhcc-cCCcEEEEcCCCCCccCCCCHHHHHH
Q 014172 175 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRIS-ENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDE 252 (429)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~e~l~~~l~-~~~~~i~l~~p~NPtG~~~~~~~l~~ 252 (429)
++++||+|+++.|+|.++...++..|++++.+|++++ ++|.+|++.|+++++ +++++|++++||||||.+++.+++++
T Consensus 109 l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~ 188 (399)
T 1c7n_A 109 FTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQK 188 (399)
T ss_dssp HCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCHHHHHH
T ss_pred hcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCHHHHHH
Confidence 9999999999999999999999999999999998633 346789999999997 68999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCC-CCceEEEeccChhcccccceeeEEEcC-HHHHHHHHHHhhc
Q 014172 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM-WERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQ 330 (429)
Q Consensus 253 I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~R~G~v~~~-~~~~~~l~~~~~~ 330 (429)
|+++|++| |+++|+||+|.++.+++....++..+... .++++++.||||.+|++|+|+||++++ +++++.+......
T Consensus 189 i~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~ 267 (399)
T 1c7n_A 189 IKDIVLKS-DLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSRDA 267 (399)
T ss_dssp HHHHHHHS-SCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHH
T ss_pred HHHHHHHc-CCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHHHHHHHHHhh
Confidence 99999999 99999999999998877555566555321 478899999999999999999999997 6799988877666
Q ss_pred ccC-CCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc-CCCceeecCCceEEEEEecCCccCCcccCCC
Q 014172 331 FTS-GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFG 408 (429)
Q Consensus 331 ~~~-~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~ 408 (429)
++. +++.++|.++.++|+. ..+++++.++.++++++++.+.|++ +||+++.++++++++|++++.. +
T Consensus 268 ~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~------- 336 (399)
T 1c7n_A 268 TSGMPFTTLGYKACEICYKE---CGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRAL-K------- 336 (399)
T ss_dssp TTCCCCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEECGGG-C-------
T ss_pred cccCCCCHHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecCCceEEEEEEcccC-C-------
Confidence 544 5789999999999986 4678999999999999999999998 8899998999999999999742 0
Q ss_pred CCCChHHHHHHHHHhCCeec
Q 014172 409 KIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 409 ~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+..+++++|++++||.+
T Consensus 337 --~~~~~~~~~l~~~~gi~v 354 (399)
T 1c7n_A 337 --MDHKAMEEFMIHKAQIFF 354 (399)
T ss_dssp --CCHHHHHHHHHHTTCCCC
T ss_pred --CCHHHHHHHHHHhCCEEE
Confidence 267889999987779876
No 41
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=1.8e-45 Score=365.98 Aligned_cols=338 Identities=16% Similarity=0.139 Sum_probs=269.0
Q ss_pred cccccCCchhHHHHHHHHHHHhcC-CCeEEcCCCCC-CCCCh----HHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHH
Q 014172 71 RVNAVKPSKTVAITDQATALAQAG-VSVIRLAAGEP-DFDTP----VLIAEAGINAIRE-GFTRYTPNAGTLELRSAICH 143 (429)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~g-~~~i~L~~g~~-~~~~p----~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~ 143 (429)
.+...++..+..+ ....+..+ +++|+|+.|.+ ++..+ +.+.+++.+.... +..+|.+..|.+++|+++++
T Consensus 6 ~~~~~~~~~i~~~---~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~ 82 (401)
T 7aat_A 6 HVEMGPPDPILGV---TEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAE 82 (401)
T ss_dssp TCCCCCCCHHHHH---HHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHH
T ss_pred cCCCCCCChhHHH---HHHHhhCCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHH
Confidence 3444455544444 44444443 45899999997 65442 4678877776653 56789888999999999999
Q ss_pred HHHhhcCCCCCCCcEEE--ecChHHHHHHHHHHhc---CCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCH
Q 014172 144 KLKEENGLSYTPDQILV--SNGAKQSILQAVLAVC---SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDP 218 (429)
Q Consensus 144 ~l~~~~g~~~~~~~i~~--t~G~~~al~~~l~~l~---~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 218 (429)
++.+.+|..+++++|++ |+|+++++.+++.++. ++||+|++++|+|.+|...++..|++++.+|++.++++.+|+
T Consensus 83 ~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 162 (401)
T 7aat_A 83 LALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDF 162 (401)
T ss_dssp HHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECH
T ss_pred HhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCH
Confidence 99988887777899977 9999999998877664 899999999999999999999999999999987555688999
Q ss_pred HHHHhhcc---cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCC--CCCccccCCCCCCc
Q 014172 219 KVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA--THTSFASLPGMWER 293 (429)
Q Consensus 219 e~l~~~l~---~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~--~~~~~~~~~~~~~~ 293 (429)
+.+++.+. ++++++++++||||||.+++.+++++|+++|++| |+++|+||+|.++.+++. ...++..+....++
T Consensus 163 ~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~ 241 (401)
T 7aat_A 163 TGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKR-NLLAYFDMAYQGFASGDINRDAWALRHFIEQGID 241 (401)
T ss_dssp HHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhC-CcEEEEccccccccCCCccccHHHHHHHHhcCCc
Confidence 97666654 5788999999999999999999999999999999 999999999999888653 12233333234688
Q ss_pred eEEEeccChhcccccceeeEEEc---CHH----HHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCC---hHHHHHHHHH
Q 014172 294 TLTVNGFSKAFAMTGWRLGYIAG---PKH----FVAACNKIQSQFTSGASSISQKAGVAALGLGYAG---GEVVSKMVKA 363 (429)
Q Consensus 294 ~i~~~S~SK~~~~~G~R~G~v~~---~~~----~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~---~~~~~~~~~~ 363 (429)
+++++||||.||++|+|+||+++ +++ ++..+.........+++.+.|.++..++.++... .+++++++++
T Consensus 242 ~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 321 (401)
T 7aat_A 242 VVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADR 321 (401)
T ss_dssp CEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999876 555 5566666666677778888888888888652110 3557888999
Q ss_pred HHHHHHHHHHHhccC---CCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 364 FRERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 364 ~~~~r~~l~~~L~~l---~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++++|+++.+.|+++ +++++..|+++||+|++++ .+++.+|++++||.+
T Consensus 322 ~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~ll~~~gi~v 373 (401)
T 7aat_A 322 IISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLK----------------PEQVERLTKEFSIYM 373 (401)
T ss_dssp HHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCCC----------------HHHHHHHHHHHCEEC
T ss_pred HHHHHHHHHHHHHhcCCCCCCceecCCcceEEecCCC----------------HHHHHHHHHhCCEec
Confidence 999999999999886 2477778999999998663 355678888889986
No 42
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=2.9e-44 Score=355.91 Aligned_cols=315 Identities=17% Similarity=0.282 Sum_probs=272.8
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHH-HHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLE-LRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~-lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 174 (429)
++|+|+.|++++++|+.+.+++.+.+......|++. ..+ +|+++++++.+.+|+.+++++|++|+|+++++.+++++
T Consensus 29 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~ 106 (390)
T 1d2f_A 29 DLLPFTISDMDFATAPCIIEALNQRLMHGVFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQ 106 (390)
T ss_dssp -CEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHH
T ss_pred CeeEeeecCCCCCCCHHHHHHHHHHHhCCCCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHH
Confidence 589999999998889999999999987656778654 678 99999999998889778889999999999999999999
Q ss_pred hcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCC-CCCCCHHHHHhhccc-CCcEEEEcCCCCCccCCCCHHHHHH
Q 014172 175 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISE-NFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDE 252 (429)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~d~e~l~~~l~~-~~~~i~l~~p~NPtG~~~~~~~l~~ 252 (429)
++++||+|+++.|+|.++...++..|++++.+|++.++ +|.+|++.|++++++ ++++|++++|+||||.+++.+++++
T Consensus 107 l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~ 186 (390)
T 1d2f_A 107 WSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEI 186 (390)
T ss_dssp SSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHH
T ss_pred hcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcCHHHHHH
Confidence 99999999999999999999999999999999987543 467899999999986 7899999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcC-HHHHHHHHHHhh-c
Q 014172 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQS-Q 330 (429)
Q Consensus 253 I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~-~~~~~~l~~~~~-~ 330 (429)
|+++|++| |+++|+||+|.++.+++....++..+.... ..+ +.||||.+|++|+|+||++++ +++++.+..... .
T Consensus 187 l~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~-~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~ 263 (390)
T 1d2f_A 187 MADLCERH-GVRVISDEIHMDMVWGEQPHIPWSNVARGD-WAL-LTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGR 263 (390)
T ss_dssp HHHHHHHT-TCEEEEECTTTTCBCSSSCCCCGGGTCCSS-EEE-EECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTT
T ss_pred HHHHHHHc-CCEEEEEccccccccCCCCCcCHHHcchhh-Hhh-ccCccHhhcccChhheEEEECCHHHHHHHHHHHhhh
Confidence 99999999 999999999999988765555665554322 123 999999999999999999985 788888877665 3
Q ss_pred ccC-CCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc-CCCceeecCCceEEEEEecCCccCCcccCCC
Q 014172 331 FTS-GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFG 408 (429)
Q Consensus 331 ~~~-~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~ 408 (429)
... +++.+.|.++.++++. .++++++.++.++++++.+.+.|++ +||+++.+|++++++|++++.. +
T Consensus 264 ~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~------- 332 (390)
T 1d2f_A 264 DGLSSPSVLALTAHIAAYQQ---GAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPL-N------- 332 (390)
T ss_dssp SCCCSCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGG-C-------
T ss_pred cccCCCCHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEecCCccEEEEEEcccc-C-------
Confidence 443 6789999999998986 4778999999999999999999998 7899988899999999999742 0
Q ss_pred CCCChHHHHHHHHHhCCeec
Q 014172 409 KIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 409 ~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+..+++++|++++||.+
T Consensus 333 --~~~~~l~~~l~~~~gi~v 350 (390)
T 1d2f_A 333 --IDDNALQKALIEQEKVAI 350 (390)
T ss_dssp --CCHHHHHHHHHHTTCEEC
T ss_pred --CCHHHHHHHHHHHcCEEe
Confidence 267899999987779986
No 43
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=3.1e-44 Score=354.69 Aligned_cols=327 Identities=29% Similarity=0.509 Sum_probs=277.8
Q ss_pred cCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHH
Q 014172 67 SLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLK 146 (429)
Q Consensus 67 ~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~ 146 (429)
.++++++.++++.+..+...+.. +++|+|+.|.|++++|+.+.+++.+.+.+ ...|++..|..+||+++++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~~~y~~~~~~~~l~~~la~~~~ 75 (381)
T 1v2d_A 2 RLHPRTEAAKESIFPRMSGLAQR-----LGAVNLGQGFPSNPPPPFLLEAVRRALGR-QDQYAPPAGLPALREALAEEFA 75 (381)
T ss_dssp CCCGGGGGC---CHHHHHHHHHH-----HTCEECCCCSCSSCCCHHHHHHHHHHTTT-SCSCCCTTCCHHHHHHHHHHHT
T ss_pred chhhhhhhcCccHHHHHHHHHhc-----CCeEEecCCCCCCCCCHHHHHHHHHHHHH-hcCCCCCCCCHHHHHHHHHhcC
Confidence 46788888888877666555443 34899999999998899999999998865 5679877799999999999963
Q ss_pred hhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCC--CCCCCCCCHHHHHhh
Q 014172 147 EENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR--ISENFLLDPKVLESK 224 (429)
Q Consensus 147 ~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~~~d~e~l~~~ 224 (429)
+++++|++|+|+++++..++.+++++||+|++++|+|.++...++..|++++.++++ ++ ++.+|+++|+++
T Consensus 76 ------~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~d~~~l~~~ 148 (381)
T 1v2d_A 76 ------VEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPE-GFRLDLSALEKA 148 (381)
T ss_dssp ------SCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETT-EEECCHHHHHTT
T ss_pred ------CChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCc-cCCcCHHHHHHh
Confidence 467899999999999999999999999999999999999999999999999999986 32 367899999999
Q ss_pred cccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhc
Q 014172 225 LTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF 304 (429)
Q Consensus 225 l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 304 (429)
+++++++|++++|+||||.+++.+++++|+++|++| |+++|+||+|.++.+ +....++..+ ..++++++.||||.+
T Consensus 149 l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~-g~~~~~~~~~--~~~~~~~~~s~sK~~ 224 (381)
T 1v2d_A 149 LTPRTRALLLNTPMNPTGLVFGERELEAIARLARAH-DLFLISDEVYDELYY-GERPRRLREF--APERTFTVGSAGKRL 224 (381)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTTTCBS-SSCCCCHHHH--CTTTEEEEEEHHHHT
T ss_pred cCcCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHc-CCEEEEEcCcccccc-CCCCCCHHHh--cCCCEEEEeechhhc
Confidence 988899999999999999999999999999999999 999999999999887 4444455544 357899999999999
Q ss_pred ccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceee
Q 014172 305 AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (429)
Q Consensus 305 ~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~ 384 (429)
|++|+|+||+++++++++.+.........+++.+.|.++.++|+... .+++++++++.++++++++.+.|++. |+++.
T Consensus 225 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 302 (381)
T 1v2d_A 225 EATGYRVGWIVGPKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLAR-REGFYEALREGYRRRRDLLAGGLRAM-GLRVY 302 (381)
T ss_dssp TCGGGCCEEEECCTTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHHHHHHT-TCCEE
T ss_pred CCcccceEEEEeCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHHHHHHHHHHHC-CCEec
Confidence 99999999999999999988877665666788999999999988511 04678899999999999999999986 89998
Q ss_pred cCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 385 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 385 ~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.|++++|+|++++.. + +.++++++||.+
T Consensus 303 ~~~~~~~~~~~~~~~------------~----~~~~l~~~gi~v 330 (381)
T 1v2d_A 303 VPEGTYFLMAELPGW------------D----AFRLVEEARVAL 330 (381)
T ss_dssp CCSBSSEEEEECTTC------------C----HHHHHHHTCEEC
T ss_pred CCCcceEEEEecChH------------h----HHHHHHhCCEEE
Confidence 899999999998741 2 555666779876
No 44
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=4.3e-45 Score=366.40 Aligned_cols=341 Identities=21% Similarity=0.316 Sum_probs=289.8
Q ss_pred ccccCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCC--ChHHHHHHHHHHHHcC---CCCCCCCCCCHHHH
Q 014172 64 VDVSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFD--TPVLIAEAGINAIREG---FTRYTPNAGTLELR 138 (429)
Q Consensus 64 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~--~p~~v~~a~~~~~~~~---~~~Y~~~~G~~~lr 138 (429)
++..+++++..++++.+..+...+ .++++|+|+.|.|+.. +++.+.+++.+.+... ...|++..|..++|
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr 91 (425)
T 1vp4_A 17 LEGKISKIGQNMKSSIIREILKFA-----ADKDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLK 91 (425)
T ss_dssp HHHHCCHHHHTCCCCCHHHHTTTT-----TSTTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHH
T ss_pred hHhhhhhhhhcCCCcHHHHHHHhc-----cCCCceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHH
Confidence 344578888888887665554322 2457999999987654 5788999999888653 36898888999999
Q ss_pred HHHHHHHHhhcCCC-CCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCC
Q 014172 139 SAICHKLKEENGLS-YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLD 217 (429)
Q Consensus 139 ~~ia~~l~~~~g~~-~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d 217 (429)
+++++++.+.+|.+ +++++|++|+|+++++..++++++++||+|+++.|+|.++...++..|++++.+|++++ .+|
T Consensus 92 ~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---~~d 168 (425)
T 1vp4_A 92 QQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD---GMD 168 (425)
T ss_dssp HHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---EEC
T ss_pred HHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCC---CCC
Confidence 99999998877876 77899999999999999999999999999999999999999999999999999998643 289
Q ss_pred HHHHHhhccc--------CCcEEE-EcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCC
Q 014172 218 PKVLESKLTE--------KSRLLI-LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 288 (429)
Q Consensus 218 ~e~l~~~l~~--------~~~~i~-l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~ 288 (429)
++.|++++++ ++++|+ +++|+||||.+++.+++++|+++|++| |+++|+||+|.++.|++....++..+.
T Consensus 169 ~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~ 247 (425)
T 1vp4_A 169 LNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKY-DLFIVEDDPYGALRYEGETVDPIFKIG 247 (425)
T ss_dssp HHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECSSTTCBCSSCCCCCHHHHH
T ss_pred HHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHc-CCEEEEECCCccccCCCCCCcCHHHhC
Confidence 9999998875 788884 799999999999999999999999999 999999999999988765555555553
Q ss_pred CCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Q 014172 289 GMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERR 368 (429)
Q Consensus 289 ~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r 368 (429)
. .++++++.||||.++ +|+|+||+++++++++.+.......+.+++.++|.++.++|+... .++++++.++.+++++
T Consensus 248 ~-~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~ 324 (425)
T 1vp4_A 248 G-PERVVLLNTFSKVLA-PGLRIGMVAGSKEFIRKIVQAKQSADLCSPAITHRLAARYLERYD-LLEQLKPTIELYRRKR 324 (425)
T ss_dssp C-TTTEEEEEESTTTTC-GGGCEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSC-HHHHTHHHHHHHHHHH
T ss_pred C-CCCEEEEeccccccc-cccceEEEeeCHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHH
Confidence 2 478999999999999 999999999999999999887766667789999999999998732 1577889999999999
Q ss_pred HHHHHHhcc-CC---CceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 369 DFLVKSFGE-LE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 369 ~~l~~~L~~-l~---g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.+.+.|++ ++ |+++..|.+|+|+|++++.. .+..+++++|+++ ||.+
T Consensus 325 ~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~~-----------~~~~~l~~~l~~~-gi~v 376 (425)
T 1vp4_A 325 TVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEG-----------FDTWEMFEYAKRK-KVFY 376 (425)
T ss_dssp HHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTT-----------CCTTTTHHHHHHH-TEEC
T ss_pred HHHHHHHHHhCCCCCceEEecCCccEEEEEEcCCC-----------CCHHHHHHHHHHC-CCEE
Confidence 999999987 45 68888889999999999742 2567899999988 9876
No 45
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=3.8e-44 Score=359.06 Aligned_cols=319 Identities=24% Similarity=0.360 Sum_probs=285.8
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHH
Q 014172 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (429)
Q Consensus 94 g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~ 173 (429)
|+++|+|+.|++++++|+.+.+++.+.+.+....|++. ..++++++++++.+.+|+++++++|++|+|+++++..+++
T Consensus 60 g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~ 137 (421)
T 3l8a_A 60 NPELLQMWVADMDFLPVPEIKEAIINYGREHIFGYNYF--NDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQ 137 (421)
T ss_dssp CTTCEECCSSCCCSCCCHHHHHHHHHHHHHCCSSCBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHH
T ss_pred CCCeeecccCCCCCCCCHHHHHHHHHHHhcCCcCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHH
Confidence 67899999999999999999999999988766778654 4899999999999999988889999999999999999999
Q ss_pred HhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCC-CCCCCCCCHHHHHhhcc-cCCcEEEEcCCCCCccCCCCHHHHH
Q 014172 174 AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR-ISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLD 251 (429)
Q Consensus 174 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~~~d~e~l~~~l~-~~~~~i~l~~p~NPtG~~~~~~~l~ 251 (429)
+++++||+|+++.|+|.++...++..|.+++.+|++ .+++|.+|++.|+++++ +++++|++++|+||||.+++.++++
T Consensus 138 ~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~ 217 (421)
T 3l8a_A 138 AFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLI 217 (421)
T ss_dssp HHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHH
T ss_pred HhcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHH
Confidence 999999999999999999999999999999999987 45567789999999998 7899999999999999999999999
Q ss_pred HHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCC-CCCceEEEeccChhcccccceeeEEEcC-HHHHHHHHHHhh
Q 014172 252 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG-MWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQS 329 (429)
Q Consensus 252 ~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~~~G~R~G~v~~~-~~~~~~l~~~~~ 329 (429)
+|.++|++| |+++|+||+|.++.+++....++..+.. ..++++++.|+||.+|++|+|+||++++ +++++.+.....
T Consensus 218 ~l~~l~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~~~ 296 (421)
T 3l8a_A 218 KIAELCKKH-GVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQL 296 (421)
T ss_dssp HHHHHHHHH-TCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHc-CCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHHHHHHHHH
Confidence 999999999 9999999999999998876777777653 2588899999999999999999999998 899998887653
Q ss_pred c-ccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCC
Q 014172 330 Q-FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFG 408 (429)
Q Consensus 330 ~-~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~ 408 (429)
. ...+++.+++.++.++++. .++|++++++.++++++++.+.|+++|++++.+++++|++|++++.. +
T Consensus 297 ~~~~~~~n~~~~~a~~aal~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~~~~~~~v~~~~~-~------- 365 (421)
T 3l8a_A 297 ANNQHEVPTVGMIATQAAFQY---GKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAY-A------- 365 (421)
T ss_dssp HTTCSCCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECCSBSSEEEEECGGG-T-------
T ss_pred hcccCCCCHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCCCeeEEEEEecccc-C-------
Confidence 3 3447899999999999986 57889999999999999999999988899999999999999999752 1
Q ss_pred CCCChHHHHHHHHHhCCeec
Q 014172 409 KIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 409 ~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+..+++++|++++||.+
T Consensus 366 --~~~~~l~~~l~~~~gi~v 383 (421)
T 3l8a_A 366 --IAQPQLSEKLQNEAKVVL 383 (421)
T ss_dssp --CCTTHHHHHHHHTTCEEC
T ss_pred --CCHHHHHHHHHHhCCEEE
Confidence 257799999998889986
No 46
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=3.7e-44 Score=356.70 Aligned_cols=335 Identities=25% Similarity=0.399 Sum_probs=272.7
Q ss_pred cCcccccccCC-chhHHHHHHHHHHH--hcCCCeEEcCCCCCCCCChHHHHHHHHHHHHc-----CCCCCCCCCCCHHHH
Q 014172 67 SLSPRVNAVKP-SKTVAITDQATALA--QAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-----GFTRYTPNAGTLELR 138 (429)
Q Consensus 67 ~~s~~~~~~~~-~~~~~~~~~~~~~~--~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~-----~~~~Y~~~~G~~~lr 138 (429)
++++++.++.+ +.+..+.++..... ..++++|+|+.|++++++|+.+.+++.+.+.. ....|++..|..+||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr 81 (400)
T 3asa_A 2 KRNPHFVSLTKNYLFADLQKRVAQFRLENPQHTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALR 81 (400)
T ss_dssp CCCHHHHTCCCCCHHHHHHHHHHHHHHHCTTSCCEECSSCCCCCCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHH
T ss_pred ccchhhhccCCcccHHHHHHHHHHhhhhcCCCceEeccCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHH
Confidence 45788888876 44566666555543 24678999999999988899999999988754 246798888999999
Q ss_pred HHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCE-EEEecCCCCCCCCCC
Q 014172 139 SAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADAT-PVILPTRISENFLLD 217 (429)
Q Consensus 139 ~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~-~~~v~~~~~~~~~~d 217 (429)
+++++++. +|. +++++|++|+|+++++..++ .++++||+|++++|+|.++...++..|++ ++.+|+++++++..|
T Consensus 82 ~~la~~l~--~g~-~~~~~v~~~~G~~~al~~~~-~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 157 (400)
T 3asa_A 82 QKLSEDFY--RGF-VDAKEIFISDGAKVDLFRLL-SFFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPE 157 (400)
T ss_dssp HHHHHTTS--TTS-SCGGGEEEESCHHHHHHHHH-HHHCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCC
T ss_pred HHHHHHHH--cCC-CCHHHEEEccChHHHHHHHH-HHcCCCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcccC
Confidence 99999964 454 57889999999999999865 45689999999999999999999999999 999998765555555
Q ss_pred HHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEE
Q 014172 218 PKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTV 297 (429)
Q Consensus 218 ~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~ 297 (429)
++. . +++++|++++||||||.+++.+++++|+++|++| |+++|+||+|.++.+++....++..++...++++++
T Consensus 158 l~~---~--~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 231 (400)
T 3asa_A 158 FPE---D--THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEH-EILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEI 231 (400)
T ss_dssp CCT---T--CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEE
T ss_pred hhh---c--cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHc-CCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEE
Confidence 432 1 5789999999999999999999999999999999 999999999999887664444555554334688999
Q ss_pred eccChhcccccceeeEEEcCHHH-------HHHHHHHhhcc-cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Q 014172 298 NGFSKAFAMTGWRLGYIAGPKHF-------VAACNKIQSQF-TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRD 369 (429)
Q Consensus 298 ~S~SK~~~~~G~R~G~v~~~~~~-------~~~l~~~~~~~-~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~ 369 (429)
+||||.+|++|+|+||+++++++ ++.+....... ..+++.++|.++.++|+.. +++++++.++++++
T Consensus 232 ~s~sK~~g~~GlriG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-----~~~~~~~~~~~~~~ 306 (400)
T 3asa_A 232 NSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSIL-----PQLEAIHYYRENSD 306 (400)
T ss_dssp EECCGGGTTTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT-----TTCHHHHHHHHHHH
T ss_pred ecchhhcCCcchheeEEeeChhhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcH-----HHHHHHHHHHHHHH
Confidence 99999999999999999999888 66664332222 2358999999999999862 56788899999999
Q ss_pred HHHHHhccCCCceeecCCceEEEEEe-cCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 370 FLVKSFGELEGVKMSEPQGAFYLFID-FSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 370 ~l~~~L~~l~g~~~~~p~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++.+.|+++ |+++..|.+++|+|++ ++.. .++.+++++|++++||.+
T Consensus 307 ~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~~~~gv~v 354 (400)
T 3asa_A 307 LLRKALLAT-GFEVFGGEHAPYLWVKPTQAN-----------ISDRDLFDFFLREYHIAI 354 (400)
T ss_dssp HHHHHHHHT-TCEEEECSSSSEEEEECCCTT-----------CCTTTHHHHHHHHHSEEC
T ss_pred HHHHHHHHC-CCeeeCCCCceEEEEeccCCC-----------CCHHHHHHHHHHhCCEEE
Confidence 999999988 8998888889999999 7642 245689999988879876
No 47
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=1.5e-45 Score=367.64 Aligned_cols=346 Identities=13% Similarity=0.102 Sum_probs=263.8
Q ss_pred ccccCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCC-CCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Q 014172 64 VDVSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP-DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAIC 142 (429)
Q Consensus 64 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~-~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia 142 (429)
++-++++++..++++.+..+.+.++. ...+++|+|+.|+| +++.|+.+.+++.++.......|++..|..+||++++
T Consensus 12 ~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~i~l~~g~~~d~~~~~~v~~a~~~a~~~~~~~y~~~~g~~~lr~~ia 89 (409)
T 4eu1_A 12 LEAQTQGPGSMGKPDPILGLGQDFRM--DPAKRKVNLSIGVYRDDADQPFVLECVKQATLGTNMDYAPVTGIASFVEEAQ 89 (409)
T ss_dssp ---------------CHHHHHHHHHH--CCCSSCEECCCSSCCCTTSCCCCCHHHHTCCCCSCCCCCCTTCCHHHHHHHH
T ss_pred hhhhHhhcCCCCCCChHHHHHHHHhh--CCCcCceeeeeeEEECCCCCEeecHHHHhcCccccccCCCCCCcHHHHHHHH
Confidence 45567889999999876666555443 23457999999997 8887777888877764445678999999999999999
Q ss_pred HHHHhhcCCCCCCCcE--EEecChHHHHHHH---HHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCC
Q 014172 143 HKLKEENGLSYTPDQI--LVSNGAKQSILQA---VLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLD 217 (429)
Q Consensus 143 ~~l~~~~g~~~~~~~i--~~t~G~~~al~~~---l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d 217 (429)
+++....+.++++++| ..|.|+++++..+ +++++++||+|++++|+|.+|...++..|++++.+++..++++.+|
T Consensus 90 ~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d 169 (409)
T 4eu1_A 90 KLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLN 169 (409)
T ss_dssp HHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEEC
T ss_pred HHHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCc
Confidence 9984322211236788 4599999998865 4456789999999999999999999999999999998656678899
Q ss_pred HHHHHhhcc--c-CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCC--CCCccccCCCCCC
Q 014172 218 PKVLESKLT--E-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA--THTSFASLPGMWE 292 (429)
Q Consensus 218 ~e~l~~~l~--~-~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~--~~~~~~~~~~~~~ 292 (429)
++++++.++ + +++++++++||||||.+++.+++++|+++|++| |++||+||+|.++.|++. ...++..+....+
T Consensus 170 ~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~-~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~ 248 (409)
T 4eu1_A 170 LAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRR-NHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVP 248 (409)
T ss_dssp HHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSS
T ss_pred HHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhC-CcEEEEeccccccccCCcccchHHHHHHHhhCC
Confidence 999999986 2 455666799999999999999999999999999 999999999999988752 1233333333457
Q ss_pred ceEEEeccChhcccccceeeEE---EcCHH----HHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCC---hHHHHHHHH
Q 014172 293 RTLTVNGFSKAFAMTGWRLGYI---AGPKH----FVAACNKIQSQFTSGASSISQKAGVAALGLGYAG---GEVVSKMVK 362 (429)
Q Consensus 293 ~~i~~~S~SK~~~~~G~R~G~v---~~~~~----~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~---~~~~~~~~~ 362 (429)
++++++||||.||++|+|+||+ +.+++ +++.+.........+++.++|.++..+|+.+... .++++++++
T Consensus 249 ~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 328 (409)
T 4eu1_A 249 NLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSS 328 (409)
T ss_dssp CCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred cEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 8899999999999999999996 56677 6666666666667778899999999999852100 234778899
Q ss_pred HHHHHHHHHHHHhccCCC----ceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 363 AFRERRDFLVKSFGELEG----VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 363 ~~~~~r~~l~~~L~~l~g----~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
+++++++++.+.|+++ | +++..|+++||+|++++ .+++.+|++++||.+.
T Consensus 329 ~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~ll~~~gv~v~ 382 (409)
T 4eu1_A 329 RIAEVRKRLVSELKAC-GSVHDWSHIERQVGMMAYTGLT----------------REQVELLRSEYHIYMT 382 (409)
T ss_dssp HHHHHHHHHHHHHHHT-TCCSCCHHHHHSCSSEEECCCC----------------HHHHHHHHHHHCEECC
T ss_pred HHHHHHHHHHHHHHhc-CCCCCcceecCCceEEEEeCCC----------------HHHHHHHHHcCCEEEc
Confidence 9999999999999987 4 77788999999996553 3668889988899863
No 48
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=7.9e-45 Score=364.85 Aligned_cols=314 Identities=17% Similarity=0.246 Sum_probs=271.6
Q ss_pred CCeEEcCCCCC-CCCChHHH--HHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCc---EEEecChHHH
Q 014172 95 VSVIRLAAGEP-DFDTPVLI--AEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQ---ILVSNGAKQS 167 (429)
Q Consensus 95 ~~~i~L~~g~~-~~~~p~~v--~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~---i~~t~G~~~a 167 (429)
+++|+|+.|+| +++.|+.+ .+++.+.+.. ...+|++..|..+||+++++++.+.+ +.+++++ |++|+|++++
T Consensus 47 ~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~-~~~~~~~~~~i~~t~g~~~a 125 (430)
T 2x5f_A 47 STTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDN-PELSIDNMSRPIVTNALTHG 125 (430)
T ss_dssp TCSEECCCSSCEETTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHC-TTCCGGGBCCCEEESHHHHH
T ss_pred CCcEEeeeeeccCCCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccC-cccCCCccceEEEcCCchHH
Confidence 56899999999 88877766 7776665543 45789888899999999999998764 5677888 9999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCCChHHHHHH-cCCEEEEecCCCCCCCCCCHHHHHhhccc---CCcEEEEcCCCCCccC
Q 014172 168 ILQAVLAVCSPGDEVIIPAPFWVSYPEMARI-ADATPVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGS 243 (429)
Q Consensus 168 l~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~e~l~~~l~~---~~~~i~l~~p~NPtG~ 243 (429)
+..++++++++||+|++++|+|.++...++. .|++++.++++.++ +.+|++++++++++ +++++++++||||||.
T Consensus 126 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~ 204 (430)
T 2x5f_A 126 LSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKD-GHYTTDSLVEALQSYNKDKVIMILNYPNNPTGY 204 (430)
T ss_dssp HHHHHHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTT-SCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCC
T ss_pred HHHHHHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCcc-CCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCC
Confidence 9999999999999999999999999999999 99999999987544 67999999999976 7899999999999999
Q ss_pred CCCHHHHHHHHHHHHh-----CCCeEEEEccCCcccccCCCCCCccc-cCCCCCCc---eEEEeccChhcccccceeeEE
Q 014172 244 VYPKNLLDEIARIVAK-----HPRLLVLSDEIYEHIIYAPATHTSFA-SLPGMWER---TLTVNGFSKAFAMTGWRLGYI 314 (429)
Q Consensus 244 ~~~~~~l~~I~~~a~~-----~~~i~vi~Deay~~~~~~~~~~~~~~-~~~~~~~~---~i~~~S~SK~~~~~G~R~G~v 314 (429)
+++.+++++|+++|++ | |++||+||+|.++.+++....++. .+....++ +++++||||.+|++|+|+||+
T Consensus 205 ~~~~~~l~~i~~~~~~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~ 283 (430)
T 2x5f_A 205 TPTHKEVTTIVEAIKALANKGT-KVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFM 283 (430)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTC-EEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEE
T ss_pred cCCHHHHHHHHHHHHhhhhccC-CEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEE
Confidence 9999999999999999 9 999999999999988765444554 44433567 899999999999999999999
Q ss_pred Ec---CHHHHHHHHHHhhc----ccCCCchHHHHHHHHHHh-cCCCChHHHHH---HHHHHHHHHHHHHHHhc----cCC
Q 014172 315 AG---PKHFVAACNKIQSQ----FTSGASSISQKAGVAALG-LGYAGGEVVSK---MVKAFRERRDFLVKSFG----ELE 379 (429)
Q Consensus 315 ~~---~~~~~~~l~~~~~~----~~~~~~~~~q~aa~~~l~-~~~~~~~~~~~---~~~~~~~~r~~l~~~L~----~l~ 379 (429)
++ ++++++.+...... .+.+++.+.|.++.++|+ . .++.++ +++.++++++.+.+.|+ ++
T Consensus 284 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~- 358 (430)
T 2x5f_A 284 TFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNN----KQFDKEIEQNIQTLKERYEVTKEVVYADQYHS- 358 (430)
T ss_dssp EEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSC----HHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTT-
T ss_pred EEecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccC----hHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC-
Confidence 99 99999998876654 566789999999999998 6 244444 89999999999999998 55
Q ss_pred CceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 380 GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 380 g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|+++.+|++|+|+|+++++ .+..+++++|++++||.+
T Consensus 359 g~~~~~~~~g~~~~~~~~~------------~~~~~~~~~l~~~~gi~v 395 (430)
T 2x5f_A 359 HWQAYDFNSGYFMAIKVHD------------VDPEALRKHLIDKYSIGV 395 (430)
T ss_dssp TEEECCCCBSSEEEEEESS------------SCHHHHHHHHHHHHCEEC
T ss_pred CceeeCCCceEEEEeCCCC------------CCHHHHHHHHHHhCCEEE
Confidence 7888889999999999973 268899999998569976
No 49
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=1.9e-44 Score=357.89 Aligned_cols=341 Identities=18% Similarity=0.155 Sum_probs=273.5
Q ss_pred ccccccCCchhHHHHHHHHHHHhcCCCeEEcCCC---CCCCCCh--HHHHHHHHH-HHHc-CCCCCCCCCCCHHHHHHHH
Q 014172 70 PRVNAVKPSKTVAITDQATALAQAGVSVIRLAAG---EPDFDTP--VLIAEAGIN-AIRE-GFTRYTPNAGTLELRSAIC 142 (429)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g---~~~~~~p--~~v~~a~~~-~~~~-~~~~Y~~~~G~~~lr~~ia 142 (429)
.++...+++.+..+...+.. ...+++|+|+.| +++..+| +.+.+++.+ ++.. ....|++..|..++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la 80 (397)
T 3fsl_A 3 QKVDAYAGDPILTLMERFKE--DPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIA 80 (397)
T ss_dssp TTCCCCCCCHHHHHHHHHHT--CCCSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHH
T ss_pred ccCCCCCCCchhhHHHHHhc--CCCCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHH
Confidence 34566677766666554443 233569999999 5665554 899999999 8865 4568988899999999999
Q ss_pred HHHHhhcCCCCCCC--cEEEecChHHHHHHHH--HHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCH
Q 014172 143 HKLKEENGLSYTPD--QILVSNGAKQSILQAV--LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDP 218 (429)
Q Consensus 143 ~~l~~~~g~~~~~~--~i~~t~G~~~al~~~l--~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 218 (429)
+++...++..++++ +|++|+|+++++..++ ..++++||+|+++.|+|.+|...++..|++++.+++..++++.+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 160 (397)
T 3fsl_A 81 PLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRF 160 (397)
T ss_dssp HHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECH
T ss_pred HHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcH
Confidence 99976655444678 8999999999999984 4567999999999999999999999999999999985556788999
Q ss_pred HHHHhhcc---cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCC-CCCCccccCCCCCCce
Q 014172 219 KVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP-ATHTSFASLPGMWERT 294 (429)
Q Consensus 219 e~l~~~l~---~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~-~~~~~~~~~~~~~~~~ 294 (429)
+.+++.++ ++++++++++||||||.+++.+++++|+++|++| |+++|+||+|.++.+++ ....++..+....+++
T Consensus 161 ~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (397)
T 3fsl_A 161 NDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKAR-ELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPA 239 (397)
T ss_dssp HHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCE
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhC-CEEEEEecCchhhccCcccccHHHHHHHhcCCCE
Confidence 99999997 5778888999999999999999999999999999 99999999999998864 2334444444446899
Q ss_pred EEEeccChhcccccceeeEEEc---CHHHHHHHHH----HhhcccCCCchHHHHHHHHHHhcCCC---ChHHHHHHHHHH
Q 014172 295 LTVNGFSKAFAMTGWRLGYIAG---PKHFVAACNK----IQSQFTSGASSISQKAGVAALGLGYA---GGEVVSKMVKAF 364 (429)
Q Consensus 295 i~~~S~SK~~~~~G~R~G~v~~---~~~~~~~l~~----~~~~~~~~~~~~~q~aa~~~l~~~~~---~~~~~~~~~~~~ 364 (429)
++++||||.+|++|+|+||+++ ++++++.+.. .......+++.++|.++..++..+.. ..++++++++++
T Consensus 240 i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~ 319 (397)
T 3fsl_A 240 LVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRI 319 (397)
T ss_dssp EEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHH
T ss_pred EEEecccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999974 4565554432 22334556788999998888875210 046688899999
Q ss_pred HHHHHHHHHHhccCC---CceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 365 RERRDFLVKSFGELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 365 ~~~r~~l~~~L~~l~---g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
+++++++.+.|++++ |+++..|++++|+|++++ . +.+.++++++||.+.
T Consensus 320 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~---------------~-~~~~~~l~~~gi~v~ 371 (397)
T 3fsl_A 320 LAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLS---------------A-AQVDRLREEFGVYLI 371 (397)
T ss_dssp HHHHHHHHHHHHHHCTTSCCTHHHHCCSSEEECCCC---------------H-HHHHHHHHTTCEECC
T ss_pred HHHHHHHHHHHHhcCCCCCceeecCCceEEEecCCC---------------H-HHHHHHHHhCCEEEC
Confidence 999999999999874 788888999999998764 2 345666777799863
No 50
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=2e-43 Score=346.75 Aligned_cols=327 Identities=22% Similarity=0.303 Sum_probs=273.4
Q ss_pred cCcccccccCCchhHH-HHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHH
Q 014172 67 SLSPRVNAVKPSKTVA-ITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKL 145 (429)
Q Consensus 67 ~~s~~~~~~~~~~~~~-~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l 145 (429)
++++.++.+.++.... .....+. ...+++|+|+.|++++++|+.+.+++.+.+.. ...|++..+ .++|+++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~~~y~~~~~-~~lr~~la~~~ 78 (365)
T 3get_A 3 KFNEFLNNLSNYEPGKDIEVIAKE--YGVKEVIKLASNENPFGTPPKAIECLRQNANK-AHLYPDDSM-IELKSTLAQKY 78 (365)
T ss_dssp CCCGGGGGSCCCCCCCCHHHHHHH--TTCSCCEECSSCCCTTCSCHHHHHHHHHHGGG-TTSCCCTTC-HHHHHHHHHHH
T ss_pred CcchhHhhcCCCCCCCCHHHHHHh--cCCCceEEecCCCCCCCCCHHHHHHHHHHHHh-hccCCCCCh-HHHHHHHHHHh
Confidence 4456666666554322 2222222 22367999999999999999999999998763 567866655 89999999997
Q ss_pred HhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhc
Q 014172 146 KEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL 225 (429)
Q Consensus 146 ~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l 225 (429)
. +++++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|++++.+++ .++++ +|++++++++
T Consensus 79 ~------~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~-~d~~~l~~~l 150 (365)
T 3get_A 79 K------VQNENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQS-ITHNL-DEFKKLYETH 150 (365)
T ss_dssp T------CCGGGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSS-SSCCH-HHHHHHHHHT
T ss_pred C------CCcceEEECCCHHHHHHHHHHHHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEec-CCCCC-CCHHHHHHHh
Confidence 3 56789999999999999999999999999999999999999999999999999998 34567 9999999999
Q ss_pred ccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCccccc--CCCCCCccccCCCCCCceEEEeccChh
Q 014172 226 TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIY--APATHTSFASLPGMWERTLTVNGFSKA 303 (429)
Q Consensus 226 ~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~ 303 (429)
++++++|++++||||||.+++.+++++|+++| ++ |+++|+||+|.++.| .+....+........+++++++||||.
T Consensus 151 ~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~-~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 228 (365)
T 3get_A 151 KDEIKLIFLCLPNNPLGECLDASEATEFIKGV-NE-DCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKL 228 (365)
T ss_dssp TTTEEEEEEESSCTTTCCCCCHHHHHHHHHTS-CT-TSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSST
T ss_pred CCCCCEEEEcCCCCCCCCCcCHHHHHHHHHhC-CC-CcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchH
Confidence 99999999999999999999999999999988 68 999999999999886 443333443332335789999999999
Q ss_pred cccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCcee
Q 014172 304 FAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM 383 (429)
Q Consensus 304 ~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~ 383 (429)
+|++|+|+||+++++++++.+......+ +++.+.|.++.++|+. .+++++.+++++++++.+.+.|+++ |+++
T Consensus 229 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~ 301 (365)
T 3get_A 229 YGLGGLRIGYGIANANIISAFYKLRAPF--NVSNLALKAAVAAMDD----DEFTEKTLENNFSQMELYKEFAKKH-NIKI 301 (365)
T ss_dssp TSCTTTCCEEEEECHHHHHHHHHHSCTT--CSCHHHHHHHHHHHTC----HHHHHHHHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred hcCcchheEEEEcCHHHHHHHHHhcCCC--CcCHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHHHhC-CCEE
Confidence 9999999999999999999998876553 5899999999999985 6889999999999999999999998 8988
Q ss_pred ecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 384 SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 384 ~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.++.++ |+|++++.. +..+++++|.++ ||.+
T Consensus 302 ~~~~~~-~~~~~~~~~------------~~~~~~~~l~~~-gi~v 332 (365)
T 3get_A 302 IDSYTN-FITYFFDEK------------NSTDLSEKLLKK-GIII 332 (365)
T ss_dssp CCCSSS-EEEEECSSS------------CHHHHHHHHHTT-TEEC
T ss_pred CCCCCe-EEEEECCCC------------CHHHHHHHHHHC-CEEE
Confidence 766665 589999752 678999998876 9976
No 51
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=7.5e-44 Score=355.55 Aligned_cols=343 Identities=15% Similarity=0.125 Sum_probs=277.8
Q ss_pred CcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCC-C----CCChHHHHHHHHHHHHc--CCCCCCCCCCCHHHHHH
Q 014172 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP-D----FDTPVLIAEAGINAIRE--GFTRYTPNAGTLELRSA 140 (429)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~-~----~~~p~~v~~a~~~~~~~--~~~~Y~~~~G~~~lr~~ 140 (429)
+++++..++++.+..+...+++. .++++|+|+.|.+ + ..+++.+.+++.+.+.+ ...+|++..|..+||++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ 82 (412)
T 1ajs_A 5 VFAEVPQAQPVLVFKLIADFRED--PDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTC 82 (412)
T ss_dssp TTTTCCCCCCCHHHHHHHHHHTC--CCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHH
T ss_pred hhhhCcccCCchHHHHHHHHhhc--CCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHH
Confidence 56678888899888877766542 4678999999985 3 23468899999888732 35679889999999999
Q ss_pred HHHHHHhhcCCCCCCCcEEE--ecChHHHHHHHHH--HhcCCC-----CEEEEcCCCCCChHHHHHHcCCE-EEEecCCC
Q 014172 141 ICHKLKEENGLSYTPDQILV--SNGAKQSILQAVL--AVCSPG-----DEVIIPAPFWVSYPEMARIADAT-PVILPTRI 210 (429)
Q Consensus 141 ia~~l~~~~g~~~~~~~i~~--t~G~~~al~~~l~--~l~~~g-----d~Vlv~~p~y~~~~~~~~~~g~~-~~~v~~~~ 210 (429)
+++++...+|..+++++|++ |+|+++++.++++ .++++| |+|+++.|+|.+|...++..|++ ++.+++.+
T Consensus 83 la~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~ 162 (412)
T 1ajs_A 83 ASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWD 162 (412)
T ss_dssp HHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEE
T ss_pred HHHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeec
Confidence 99999766665557889999 9999999999854 456899 99999999999999999999999 99999865
Q ss_pred CCCCCCCHHHHHhhccc---CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCC--CCCCccc
Q 014172 211 SENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP--ATHTSFA 285 (429)
Q Consensus 211 ~~~~~~d~e~l~~~l~~---~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~--~~~~~~~ 285 (429)
++++.+|++.+++.+++ +++++++++||||||.+++.+++++|+++|++| |++||+||+|.++.+++ ....++.
T Consensus 163 ~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~y~~~~~~~~~~~~~~~~ 241 (412)
T 1ajs_A 163 TEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRR-FLFPFFDSAYQGFASGNLEKDAWAIR 241 (412)
T ss_dssp TTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEEESCTTTTTSCHHHHTHHHH
T ss_pred CCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEEcccccccCCcccccchHHH
Confidence 56678999999998864 677888999999999999999999999999999 99999999999988764 1233444
Q ss_pred cCCCCCCceEEEeccChhcccccceeeEEEc---CHH----HHHHHHHHhhcccCCCchHHHHHHHHHHhcCCC---ChH
Q 014172 286 SLPGMWERTLTVNGFSKAFAMTGWRLGYIAG---PKH----FVAACNKIQSQFTSGASSISQKAGVAALGLGYA---GGE 355 (429)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~---~~~----~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~---~~~ 355 (429)
.+....++++++.||||.+|++|+|+||+++ +++ +++.+.........+++.++|.++.++|+.... ..+
T Consensus 242 ~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 321 (412)
T 1ajs_A 242 YFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTG 321 (412)
T ss_dssp HHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHH
T ss_pred HHhccCCcEEEEEecccccCCCCcceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHH
Confidence 3433357899999999999988999999999 887 444454434444455789999999999986100 024
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCC---CceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 356 VVSKMVKAFRERRDFLVKSFGELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 356 ~~~~~~~~~~~~r~~l~~~L~~l~---g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
++++++++++++++++.+.|+++. ++++..|++++|+|++++ .+++.++++++||.+.
T Consensus 322 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~l~~~gv~v~ 382 (412)
T 1ajs_A 322 NVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLN----------------PKQVEYLINQKHIYLL 382 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCC----------------HHHHHHHHHTTCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeCCC----------------HHHHHHHHHhCCEEec
Confidence 788899999999999999999873 488888999999998652 3567777878899863
No 52
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=3.8e-44 Score=362.10 Aligned_cols=341 Identities=16% Similarity=0.152 Sum_probs=270.5
Q ss_pred ccCcccccccCCchhHHHHHHHHHHHhcCC-CeEEcCCCCC-CCCCh----HHHHHHHHHHHH---cCCCCCCCCCCCHH
Q 014172 66 VSLSPRVNAVKPSKTVAITDQATALAQAGV-SVIRLAAGEP-DFDTP----VLIAEAGINAIR---EGFTRYTPNAGTLE 136 (429)
Q Consensus 66 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~-~~i~L~~g~~-~~~~p----~~v~~a~~~~~~---~~~~~Y~~~~G~~~ 136 (429)
|++..++...++..+..+. .+++..+. .+|+|+.|.+ ++..+ +.+.+++.+... .....|.+..|.++
T Consensus 22 ~~~~~~~~~~~~~~i~~~~---~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~ 98 (448)
T 3meb_A 22 MSVFSGFPASPPDAILNLT---VLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPL 98 (448)
T ss_dssp CCTTTTCCCCCCCTTHHHH---HHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHH
T ss_pred hhHHhcCCCCCCChHHHHH---HHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHH
Confidence 4456677777777555544 44445554 4799999998 76554 455555544431 34578999999999
Q ss_pred HHHHHHHHHHhhcCCC---CCCCcEEE--ecChHHHHHH--HHHHhcCCCCEEEEcCCCCCChHHHHH----HcCCEEEE
Q 014172 137 LRSAICHKLKEENGLS---YTPDQILV--SNGAKQSILQ--AVLAVCSPGDEVIIPAPFWVSYPEMAR----IADATPVI 205 (429)
Q Consensus 137 lr~~ia~~l~~~~g~~---~~~~~i~~--t~G~~~al~~--~l~~l~~~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~ 205 (429)
+|+++++++ +|.. +++++|++ |+|+++++.+ .+..++.+||+|++++|+|.+|...++ ..|++++.
T Consensus 99 lr~~ia~~l---~g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~ 175 (448)
T 3meb_A 99 FLEAAQFLM---FGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKE 175 (448)
T ss_dssp HHHHHHHHH---HCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEE
T ss_pred HHHHHHHHh---cCCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEE
Confidence 999999998 3533 22689999 9999999987 556778899999999999999999999 99999999
Q ss_pred ecCCCCC-CCCCCHHHHHhhccc---CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCC--
Q 014172 206 LPTRISE-NFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA-- 279 (429)
Q Consensus 206 v~~~~~~-~~~~d~e~l~~~l~~---~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~-- 279 (429)
+|+..++ ++.+|++.+++.+++ +++++++++||||||.+++.+++++|+++|++| |+++|+||+|.++.+++.
T Consensus 176 ~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~-~~~li~Deay~~~~~~~~~~ 254 (448)
T 3meb_A 176 YTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEK-KHIAFFDSAYQGFATGSFEA 254 (448)
T ss_dssp ECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEEESCTTTSSSCHHH
T ss_pred EeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHC-CCEEEEecccccccCCCccc
Confidence 9985444 688999999999873 567778899999999999999999999999999 999999999999887651
Q ss_pred CCCccccCCCCCCceEEEeccChhcccccceeeEE--Ec--------C-H----HHHHHHHHHhhcccCCCchHHHHHHH
Q 014172 280 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYI--AG--------P-K----HFVAACNKIQSQFTSGASSISQKAGV 344 (429)
Q Consensus 280 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v--~~--------~-~----~~~~~l~~~~~~~~~~~~~~~q~aa~ 344 (429)
...++..+....+++++++||||.||++|+|+||+ ++ + + ++++.+....+....+++.++|.++.
T Consensus 255 ~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~ 334 (448)
T 3meb_A 255 DAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQ 334 (448)
T ss_dssp HTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHH
T ss_pred CchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHH
Confidence 12233333233578899999999999999999998 66 4 4 67777777667777789999999999
Q ss_pred HHHhcCCCCh---HHHHHHHHHHHHHHHHHHHHhccC--CC------ceeecCCceEEEEEecCCccCCcccCCCCCCCh
Q 014172 345 AALGLGYAGG---EVVSKMVKAFRERRDFLVKSFGEL--EG------VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 413 (429)
Q Consensus 345 ~~l~~~~~~~---~~~~~~~~~~~~~r~~l~~~L~~l--~g------~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~ 413 (429)
.+|....... +++++++++++++|+.+.+.|+++ ++ +.+..|+++||+|+.++
T Consensus 335 ~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---------------- 398 (448)
T 3meb_A 335 VIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGLT---------------- 398 (448)
T ss_dssp HHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCCC----------------
T ss_pred HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecCCC----------------
Confidence 9987621101 447888999999999999999886 56 77778999999998763
Q ss_pred HHHHHHHHHhCCeecC
Q 014172 414 ESLCRYLLDKAQVLLH 429 (429)
Q Consensus 414 ~~~~~~Ll~~~gV~v~ 429 (429)
.+++.+|++++||++.
T Consensus 399 ~~~~~~ll~~~gV~v~ 414 (448)
T 3meb_A 399 PEHVDYLKEKWSIYLV 414 (448)
T ss_dssp HHHHHHHHHHHCEEEC
T ss_pred HHHHHHHHHhCCEEEe
Confidence 3778888888899863
No 53
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=4.9e-43 Score=348.09 Aligned_cols=331 Identities=19% Similarity=0.345 Sum_probs=280.7
Q ss_pred cCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCC--ChHHHHHHHHHHHHcC---CCCCCCCCCCHHHHHHH
Q 014172 67 SLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFD--TPVLIAEAGINAIREG---FTRYTPNAGTLELRSAI 141 (429)
Q Consensus 67 ~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~--~p~~v~~a~~~~~~~~---~~~Y~~~~G~~~lr~~i 141 (429)
.++++...+.++.+..+...+ .++++|+|+.|.++.. +++.+.+++.+.+.+. ...|++..|..++|+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~l 83 (397)
T 2zyj_A 9 AFGKGAGRIQASTIRELLKLT-----QRPGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFV 83 (397)
T ss_dssp HSCGGGGGCCCCHHHHHHHHH-----TSTTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHH
T ss_pred HhhhhhcccCchHHHHHHhhc-----cCCCceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHH
Confidence 378888888877665554432 2457999999987643 5788999998887642 36788878999999999
Q ss_pred HHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHH
Q 014172 142 CHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVL 221 (429)
Q Consensus 142 a~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l 221 (429)
++++ | +++++|++|+|+++++..++++++++||+|+++.|+|.++...++..|++++.+|.+++ .+|+++|
T Consensus 84 a~~~----g--~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~---~~d~~~l 154 (397)
T 2zyj_A 84 AEWI----G--VRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEE---GPDLDAL 154 (397)
T ss_dssp HHHH----T--SCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT---EECHHHH
T ss_pred HHHh----C--CChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCC---CCCHHHH
Confidence 9998 3 56789999999999999999999999999999999999999999999999999998642 2899999
Q ss_pred Hhhccc-CCcEEE-EcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCC--CCceEEE
Q 014172 222 ESKLTE-KSRLLI-LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM--WERTLTV 297 (429)
Q Consensus 222 ~~~l~~-~~~~i~-l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~--~~~~i~~ 297 (429)
++++++ ++++|+ +++||||||.+++.+++++|+++|++| |+++|+||+|.++.+++....++..+... .++++++
T Consensus 155 ~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~ 233 (397)
T 2zyj_A 155 EEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMER-GLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYL 233 (397)
T ss_dssp HHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHH-TCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEE
T ss_pred HHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHc-CCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEE
Confidence 999986 789885 799999999999999999999999999 99999999999998876544555554321 1688999
Q ss_pred eccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCCh-HHHHHHHHHHHHHHHHHHHHhc
Q 014172 298 NGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGG-EVVSKMVKAFRERRDFLVKSFG 376 (429)
Q Consensus 298 ~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~-~~~~~~~~~~~~~r~~l~~~L~ 376 (429)
+||||.++ +|+|+||+++++++++.+......+..+.+.++|.++.++|+. .. ++++++++.++++++.+.+.|+
T Consensus 234 ~s~sK~~~-~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~~l~~~L~ 309 (397)
T 2zyj_A 234 GSFSKVLS-PGLRVAFAVAHPEALQKLVQAKQGADLHTPMLNQMLVHELLKE---GFSERLERVRRVYREKAQAMLHALD 309 (397)
T ss_dssp EESTTTTC-GGGCCEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTT---THHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eccccccc-ccceeEEEecCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 9999999999999999998877666667899999999999986 23 6788899999999999999998
Q ss_pred c-CC-CceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 377 E-LE-GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 377 ~-l~-g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+ +| |+++..|.+|+|+|++++.. .+..+++++|+++ ||.+
T Consensus 310 ~~~~~g~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~~l~~~-gi~v 351 (397)
T 2zyj_A 310 REVPKEVRYTRPKGGMFVWMELPKG-----------LSAEGLFRRALEE-NVAF 351 (397)
T ss_dssp HHSCTTSEECCCSBSSEEEEECSTT-----------CCHHHHHHHHHHT-TEEE
T ss_pred HHCCCCeEEccCCccEEEEEEcCCC-----------CCHHHHHHHHHHC-CCEE
Confidence 7 57 69988889999999999742 2688999999887 9876
No 54
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=1e-43 Score=354.68 Aligned_cols=344 Identities=15% Similarity=0.124 Sum_probs=273.0
Q ss_pred cCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCC-CC----CChHHHHHHHHH-HHHcC-CCCCCCCCCCHHHHH
Q 014172 67 SLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP-DF----DTPVLIAEAGIN-AIREG-FTRYTPNAGTLELRS 139 (429)
Q Consensus 67 ~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~-~~----~~p~~v~~a~~~-~~~~~-~~~Y~~~~G~~~lr~ 139 (429)
++++++..++++.+..+...++.. .++++|+|+.|.+ ++ .+++.+.+++.+ .+..+ ..+|++..|..++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~ 80 (412)
T 1yaa_A 3 TLFNNIELLPPDALFGIKQRYGQD--QRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTS 80 (412)
T ss_dssp TTTTTCCCCCCCTTHHHHHHHHTC--CCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHH
T ss_pred chhccCcccCCCcHHHHHHHHhcC--CCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHH
Confidence 356778888888777766655432 4677999999986 33 356889999988 76532 457988899999999
Q ss_pred HHHHHHHhhcCCCCCCCcEEE--ecChHHHHHHHH--HHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCC
Q 014172 140 AICHKLKEENGLSYTPDQILV--SNGAKQSILQAV--LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFL 215 (429)
Q Consensus 140 ~ia~~l~~~~g~~~~~~~i~~--t~G~~~al~~~l--~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~ 215 (429)
++++++.+.+|..+++++|++ |+|+++++.+++ ..++.+||+|++++|+|.+|...++..|++++.+++..++++.
T Consensus 81 ~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 160 (412)
T 1yaa_A 81 NAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKS 160 (412)
T ss_dssp HHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTE
T ss_pred HHHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCc
Confidence 999999766665567889999 999999999873 4455799999999999999999999999999999983234577
Q ss_pred CCHHHHHhhcccC--CcEEE-EcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCC--CCCCccccCCCC
Q 014172 216 LDPKVLESKLTEK--SRLLI-LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP--ATHTSFASLPGM 290 (429)
Q Consensus 216 ~d~e~l~~~l~~~--~~~i~-l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~--~~~~~~~~~~~~ 290 (429)
+|++.+++.++++ .++++ +++||||||.+++.+++++|+++|++| |+++|+||+|.++.+++ ....++..+...
T Consensus 161 ~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 239 (412)
T 1yaa_A 161 LDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASK-NHIALFDTAYQGFATGDLDKDAYAVRLGVEK 239 (412)
T ss_dssp ECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEEESCTTTSSSCHHHHTHHHHHHHHH
T ss_pred cCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEecccccccCCcccchhHHHHHHHhc
Confidence 9999999998653 34454 599999999999999999999999999 99999999999988764 122233333222
Q ss_pred CC---ceEEEeccChhcccccceeeEEE--c-----CHH----HHHHHHHHhhcccCCCchHHHHHHHHHHhcCCC---C
Q 014172 291 WE---RTLTVNGFSKAFAMTGWRLGYIA--G-----PKH----FVAACNKIQSQFTSGASSISQKAGVAALGLGYA---G 353 (429)
Q Consensus 291 ~~---~~i~~~S~SK~~~~~G~R~G~v~--~-----~~~----~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~---~ 353 (429)
.+ ++++++||||.+|++|+|+||++ + +++ +++.+.........+++.+.|.++.++|+.... .
T Consensus 240 ~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 319 (412)
T 1yaa_A 240 LSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQW 319 (412)
T ss_dssp TTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHH
T ss_pred CCCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHH
Confidence 34 89999999999998899999998 7 566 777777755555566789999999999986210 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccCC---CceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 354 GEVVSKMVKAFRERRDFLVKSFGELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 354 ~~~~~~~~~~~~~~r~~l~~~L~~l~---g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
.+++++++++++++++++.+.|+++. ++++..|++|+|+|+.++ ...+ .++++++||.+.
T Consensus 320 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~-~~~l~~~gi~v~ 382 (412)
T 1yaa_A 320 HKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLT---------------PQMV-KRLEETHAVYLV 382 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCCC---------------HHHH-HHHHHHHCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeeccCceEEEeeCCC---------------HHHH-HHHHHhCCEEec
Confidence 25788999999999999999999873 388888999999997653 3444 777777799863
No 55
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=1e-43 Score=352.42 Aligned_cols=341 Identities=14% Similarity=0.115 Sum_probs=258.7
Q ss_pred ccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCC---CCC--CChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHH
Q 014172 70 PRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGE---PDF--DTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICH 143 (429)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~---~~~--~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~ 143 (429)
.++..++++.+..+...+... .++++|+|+.|. ++. ++++.+.+++.+.+.+ ...+|++..|..+||+++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~ 80 (396)
T 2q7w_A 3 ENITAAPADPILGLADLFRAD--ERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQE 80 (396)
T ss_dssp TTCCCCCC-------------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHH
T ss_pred cccccCCCchHHHHHHHHhcc--CCCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHH
Confidence 456667777666655544432 346789999998 333 4468999999887764 35679889999999999999
Q ss_pred HHHhhcCCCCCCCcEEE--ecChHHHHHHHHHHh--cCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHH
Q 014172 144 KLKEENGLSYTPDQILV--SNGAKQSILQAVLAV--CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPK 219 (429)
Q Consensus 144 ~l~~~~g~~~~~~~i~~--t~G~~~al~~~l~~l--~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e 219 (429)
++....+.++++++|++ |+|+++++.++++.+ +.+||+|+++.|+|.+|...++..|++++.+++++++++.+|++
T Consensus 81 ~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 160 (396)
T 2q7w_A 81 LLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFD 160 (396)
T ss_dssp HHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHH
T ss_pred HHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHH
Confidence 99654443345789998 999999999998766 46999999999999999999999999999999865456789999
Q ss_pred HHHhhccc---CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCC-CCCCccccCCCCCCceE
Q 014172 220 VLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP-ATHTSFASLPGMWERTL 295 (429)
Q Consensus 220 ~l~~~l~~---~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~-~~~~~~~~~~~~~~~~i 295 (429)
.+++.+++ +++++++++||||||.+++.+++++|+++|++| |+++|+||+|.++.+++ ....++..+....++++
T Consensus 161 ~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (396)
T 2q7w_A 161 ALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEK-GWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELI 239 (396)
T ss_dssp HHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEE
T ss_pred HHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEecccccccCCccchhHHHHHHHhcCCcEE
Confidence 99999874 467778899999999999999999999999999 99999999999988753 12223433332247899
Q ss_pred EEeccChhcccccceeeEEEc---CH----HHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCC---ChHHHHHHHHHHH
Q 014172 296 TVNGFSKAFAMTGWRLGYIAG---PK----HFVAACNKIQSQFTSGASSISQKAGVAALGLGYA---GGEVVSKMVKAFR 365 (429)
Q Consensus 296 ~~~S~SK~~~~~G~R~G~v~~---~~----~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~---~~~~~~~~~~~~~ 365 (429)
+++||||.+|++|+|+||+++ ++ ++++.+.........+++.++|.++.++|+.... ..++++++++.++
T Consensus 240 ~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~ 319 (396)
T 2q7w_A 240 VASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQ 319 (396)
T ss_dssp EEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHH
T ss_pred EEEeccccccccccccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999986 55 4555555444444555699999999999875100 0367888899999
Q ss_pred HHHHHHHHHhccCC---CceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 366 ERRDFLVKSFGELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 366 ~~r~~l~~~L~~l~---g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
++++.+.+.|+++. ++++..|++|+|+|++++ . +++.++++++||.+.
T Consensus 320 ~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~---------------~-~~~~~~l~~~gv~v~ 370 (396)
T 2q7w_A 320 RMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLT---------------K-EQVLRLREEFGVYAV 370 (396)
T ss_dssp HHHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCCC---------------H-HHHHHHHHHHCEECC
T ss_pred HHHHHHHHHHHhcCCCCCcceecCCCceEEEecCC---------------H-HHHHHHHHhcCeeec
Confidence 99999999999873 388888999999998663 2 455666667799863
No 56
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=9.8e-43 Score=349.40 Aligned_cols=323 Identities=19% Similarity=0.349 Sum_probs=264.5
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHH-----------cCCCCCCCCCCCHHHHHHHHHHHHhhcCCC--CCCCcEEEec
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIR-----------EGFTRYTPNAGTLELRSAICHKLKEENGLS--YTPDQILVSN 162 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~-----------~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~--~~~~~i~~t~ 162 (429)
..|+|+.|++++++| .+.+++.+... ....+|++..|..+||+++++++.+.+|.. +++++|++|+
T Consensus 37 ~~i~l~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~ 115 (428)
T 1iay_A 37 GVIQMGLAENQLCLD-LIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAG 115 (428)
T ss_dssp SBEECSSCCCCSSHH-HHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEE
T ss_pred ceeeeccccchhhHH-HHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEcc
Confidence 589999999887654 77777764210 113578777789999999999999888865 6789999999
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHH-HHcCCEEEEecCCCCCCCCCCHHHHHhhccc------CCcEEEEc
Q 014172 163 GAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA-RIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILC 235 (429)
Q Consensus 163 G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~-~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~~~~i~l~ 235 (429)
|+++++..++++++++||+|++++|+|.++...+ ...|++++.+|++.+++|.+|++.+++++++ ++++|+++
T Consensus 116 G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~ 195 (428)
T 1iay_A 116 GATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILT 195 (428)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEc
Confidence 9999999999999999999999999999998755 4789999999987656678999999998863 68999999
Q ss_pred CCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCC-------CCceEEEeccChhccccc
Q 014172 236 SPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM-------WERTLTVNGFSKAFAMTG 308 (429)
Q Consensus 236 ~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~-------~~~~i~~~S~SK~~~~~G 308 (429)
+||||||.+++.+++++|+++|++| |++||+||+|.++.|++....++..+... .++++++.||||.+|++|
T Consensus 196 ~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~G 274 (428)
T 1iay_A 196 NPSNPLGTTLDKDTLKSVLSFTNQH-NIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPG 274 (428)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHTT-TCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGG
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHC-CeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCC
Confidence 9999999999999999999999999 99999999999988876444444444332 578999999999999999
Q ss_pred ceeeEEEc-CHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCC
Q 014172 309 WRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 387 (429)
Q Consensus 309 ~R~G~v~~-~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~ 387 (429)
+|+||+++ ++++++.+.+.... .+.+.++|.++..+|+.....+++++++++.++++++++.+.|+++ |+++.+++
T Consensus 275 lr~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 351 (428)
T 1iay_A 275 FRVGIIYSFNDDVVNCARKMSSF--GLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GIKCLKNN 351 (428)
T ss_dssp GCEEEEEESCHHHHHHHHHHHTT--SCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBCCCS
T ss_pred ceEEEEEeCCHHHHHHHHHHHhc--ccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCCC
Confidence 99999998 68888888766443 4578999999999988511012367889999999999999999998 88888888
Q ss_pred ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 388 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+|+|+|++++..... . ...+..+++++|++++||.+
T Consensus 352 ~g~~~~~~~~~~~~~--~---~~~~~~~l~~~l~~~~gi~v 387 (428)
T 1iay_A 352 AGLFCWMDLRPLLRE--S---TFDSEMSLWRVIINDVKLNV 387 (428)
T ss_dssp SSSEEEEECGGGCSS--S---SHHHHHHHHHHHHHTSCEEC
T ss_pred eeEEEEEechhhcCC--C---chhHHHHHHHHHHHhCCEEE
Confidence 899999999753100 0 00134589999988889976
No 57
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=5.3e-43 Score=348.82 Aligned_cols=343 Identities=13% Similarity=0.139 Sum_probs=261.1
Q ss_pred cccCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCC---CCCCC--hHHHHHHHHHHHHcCCC-CCCCCCCCHHHH
Q 014172 65 DVSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGE---PDFDT--PVLIAEAGINAIREGFT-RYTPNAGTLELR 138 (429)
Q Consensus 65 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~---~~~~~--p~~v~~a~~~~~~~~~~-~Y~~~~G~~~lr 138 (429)
.|+.++++++++..+...|.......++.+.+.|||++|. ++-.+ .+.|.+|....+..+.. .|.|..|.++||
T Consensus 14 ~m~~~~~~~~v~~~p~d~i~~l~~~~~~d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr 93 (420)
T 4h51_A 14 AMTTAERWQKIQAQAPDVIFDLAKRAAAAKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFI 93 (420)
T ss_dssp -CCHHHHHHTCCCCCCCHHHHHHHHHHHCCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHH
T ss_pred hhhhhHHHhCCCCCCCChHHHHHHHHhcCCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHH
Confidence 3556677777776666667666666666667799999993 33333 47888888887766554 599999999999
Q ss_pred HHHHHHHHhhcCCCCCCC--cEEEecChHHHHHHHHHHh----cCCCCEEEEcCCCCCChHHHHHHcCCEE-EEecCCCC
Q 014172 139 SAICHKLKEENGLSYTPD--QILVSNGAKQSILQAVLAV----CSPGDEVIIPAPFWVSYPEMARIADATP-VILPTRIS 211 (429)
Q Consensus 139 ~~ia~~l~~~~g~~~~~~--~i~~t~G~~~al~~~l~~l----~~~gd~Vlv~~p~y~~~~~~~~~~g~~~-~~v~~~~~ 211 (429)
+++++++. |.....+ ..+.|.|++.++..++..+ ++|||+|++++|+|++|..+++.+|++. ..++...+
T Consensus 94 ~aia~~~~---g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~ 170 (420)
T 4h51_A 94 DEAVKIIY---GNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDP 170 (420)
T ss_dssp HHHHHHHH---C---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEG
T ss_pred HHHHHHhc---CCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeeccccc
Confidence 99999974 3222333 3456889998887666554 5799999999999999999999999974 45555555
Q ss_pred CCCCCCHHHHHhhcc---cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCC--cccc
Q 014172 212 ENFLLDPKVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT--SFAS 286 (429)
Q Consensus 212 ~~~~~d~e~l~~~l~---~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~--~~~~ 286 (429)
+++.+|.+.+.+.+. ++++++++++||||||.+++.++|++|+++|++| ++++|+||+|.+|.|++.... .+..
T Consensus 171 ~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~-~~~~~~D~~Y~~~~~~~~~~~~~~~~~ 249 (420)
T 4h51_A 171 KTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAK-HHQVFFDSAYQGYASGSLDTDAYAARL 249 (420)
T ss_dssp GGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEEESCTTTTTSCHHHHTHHHHH
T ss_pred cccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc-CceEeeehhhhhhccCCcccchHHHHh
Confidence 667789998887764 5677888899999999999999999999999999 999999999999998753222 2222
Q ss_pred CCCCCCceEEEeccChhcccccceeeEEEcCHHH-------HHHHHHHhhcccCCCchHHHHHHHHHHhcCCCC---hHH
Q 014172 287 LPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF-------VAACNKIQSQFTSGASSISQKAGVAALGLGYAG---GEV 356 (429)
Q Consensus 287 ~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~-------~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~---~~~ 356 (429)
+....++++++.||||.|+|+|||+||++++.+. ...+....+...++++..+|.++..++.+.... ++.
T Consensus 250 ~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~ 329 (420)
T 4h51_A 250 FARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAE 329 (420)
T ss_dssp HHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred HHhhCceEEEEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHH
Confidence 2333578999999999999999999999875433 333444556677889999999999999863211 234
Q ss_pred HHHHHHHHHHHHHHHHHHhccC--CC-ceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 357 VSKMVKAFRERRDFLVKSFGEL--EG-VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 357 ~~~~~~~~~~~r~~l~~~L~~l--~g-~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++.++++|+++|+.+.+.|+++ ++ |.+..+++|||.|+.++ . +.++.| +++||++
T Consensus 330 ~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gls---------------~-e~v~~L-~e~~Vy~ 387 (420)
T 4h51_A 330 LSAMAERIRTMRRTVYDELLRLQTPGSWEHVINQIGMFSFLGLS---------------K-AQCEYC-QNHNIFI 387 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHCCSSEEECCCC---------------H-HHHHHH-HHTTEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCCeecCCCceEEecCcC---------------H-HHHHHH-HhCCEEE
Confidence 6778999999999999999986 22 55567889999997653 2 445554 6679875
No 58
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=9.1e-43 Score=341.48 Aligned_cols=289 Identities=22% Similarity=0.355 Sum_probs=246.5
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 175 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l 175 (429)
++|+|+.|++++++|+.+ + + ....+|++ .+..++|+++|+++. +++++|++|+|+++++..+++++
T Consensus 30 ~~i~l~~~~~~~~~~~~v--a----~-~~~~~Y~~-~~~~~lr~~la~~~~------~~~~~v~~~~G~~~ai~~~~~~~ 95 (356)
T 1fg7_A 30 GDVWLNANEYPTAVEFQL--T----Q-QTLNRYPE-CQPKAVIENYAQYAG------VKPEQVLVSRGADEGIELLIRAF 95 (356)
T ss_dssp CSEECSSCCCSSCCCCCC--C----C-CCTTSCCC-SSCHHHHHHHHHHHT------SCGGGEEEESHHHHHHHHHHHHH
T ss_pred ceEEeeCCCCCCCCCHhH--h----h-hhhccCCC-ccHHHHHHHHHHHhC------CChHHEEEcCCHHHHHHHHHHHH
Confidence 589999999999988766 1 2 24567855 468999999999983 56789999999999999999999
Q ss_pred cCCC-CEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHH
Q 014172 176 CSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 254 (429)
Q Consensus 176 ~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~ 254 (429)
+++| |+|+++.|+|.+|...++..|++++.+|++ ++|.+|+++++++++ ++++|++++||||||.+++.+++++|+
T Consensus 96 ~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~~l~~l~ 172 (356)
T 1fg7_A 96 CEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTL--DNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQDFRTLL 172 (356)
T ss_dssp CCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCC--TTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred hCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCC--CCCCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 9999 999999999999999999999999999986 356799999999998 899999999999999999999999999
Q ss_pred HHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCC
Q 014172 255 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG 334 (429)
Q Consensus 255 ~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~ 334 (429)
++|+ | |+++|+||+|.++.. ..++..+....++++++.||||.||++|+|+||+++++++++.+......+ +
T Consensus 173 ~~~~-~-~~~li~De~~~~~~~----~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~--~ 244 (356)
T 1fg7_A 173 ELTR-G-KAIVVADEAYIEFCP----QASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKVIAPY--P 244 (356)
T ss_dssp HHHT-T-TCEEEEECTTGGGSG----GGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECHHHHHHHHHHSCSS--C
T ss_pred HhCC-C-CCEEEEEccchhhcC----CCcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCHHHHHHHHHhcCCC--C
Confidence 9999 9 999999999998652 123334433467899999999999999999999999999999988776544 5
Q ss_pred CchHHHHHHHHHHhcCCCChH--HHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCC
Q 014172 335 ASSISQKAGVAALGLGYAGGE--VVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN 412 (429)
Q Consensus 335 ~~~~~q~aa~~~l~~~~~~~~--~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~ 412 (429)
++.++|.++.++|+. .. ++++.+++++++|+++.+.|++++++....|.+++|+|++++ +
T Consensus 245 ~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~--------------~ 306 (356)
T 1fg7_A 245 LSTPVADIAAQALSP----QGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK--------------A 306 (356)
T ss_dssp SCHHHHHHHHHHTSH----HHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET--------------T
T ss_pred CCHHHHHHHHHHhcC----ccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeEEEEECC--------------C
Confidence 889999999999975 33 388999999999999999999986543445667888999986 4
Q ss_pred hHHHHHHHHHhCCeec
Q 014172 413 SESLCRYLLDKAQVLL 428 (429)
Q Consensus 413 ~~~~~~~Ll~~~gV~v 428 (429)
..+++++|. ++||.+
T Consensus 307 ~~~l~~~L~-~~gI~v 321 (356)
T 1fg7_A 307 SSAVFKSLW-DQGIIL 321 (356)
T ss_dssp HHHHHHHHH-HTTEEC
T ss_pred HHHHHHHHH-HCCEEE
Confidence 678999985 559976
No 59
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=2.8e-42 Score=336.91 Aligned_cols=303 Identities=19% Similarity=0.274 Sum_probs=262.6
Q ss_pred cCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHH
Q 014172 93 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 172 (429)
Q Consensus 93 ~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l 172 (429)
.++++|+|+.|++++++|+.+.+++.+.+.. ..+| +..+..++|+++++++. +++++|++|+|+++++..++
T Consensus 14 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~~~y-~~~~~~~l~~~la~~~~------~~~~~i~~~~g~~~a~~~~~ 85 (354)
T 3ly1_A 14 STDNPIRINFNENPLGMSPKAQAAARDAVVK-ANRY-AKNEILMLGNKLAAHHQ------VEAPSILLTAGSSEGIRAAI 85 (354)
T ss_dssp CSSSCEECSSCCCSSCCCHHHHHHHHHTGGG-TTSC-CHHHHHHHHHHHHHHTT------SCGGGEEEESHHHHHHHHHH
T ss_pred CCCceEEccCCCCCCCCCHHHHHHHHHHHhh-CcCC-CCCchHHHHHHHHHHhC------CChHHEEEeCChHHHHHHHH
Confidence 4567999999999999999999999988764 5677 56678899999999873 56789999999999999999
Q ss_pred HHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc--cCCcEEEEcCCCCCccCCCCHHHH
Q 014172 173 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT--EKSRLLILCSPSNPTGSVYPKNLL 250 (429)
Q Consensus 173 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~--~~~~~i~l~~p~NPtG~~~~~~~l 250 (429)
++++++||+|+++.|+|.++...++..|++++.++.++ ++.+|+++|+++++ +++++|++++|+||||.+++.+++
T Consensus 86 ~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l 163 (354)
T 3ly1_A 86 EAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLD--NWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVI 163 (354)
T ss_dssp HHHCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHH
T ss_pred HHHhCCCCeEEECCCCchHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHH
Confidence 99999999999999999999999999999999999864 47799999999998 789999999999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhc
Q 014172 251 DEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ 330 (429)
Q Consensus 251 ~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~ 330 (429)
++|+++| +| |+++|+||+|.++.+++.....+.......+++++++||||.+|++|+|+||+++++++++.+......
T Consensus 164 ~~l~~~~-~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~ 241 (354)
T 3ly1_A 164 EPWIASK-PA-NTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRYVAG 241 (354)
T ss_dssp HHHHHTC-CT-TEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCHHHHHHHGGGTTC
T ss_pred HHHHHhC-CC-CeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCHHHHHHHHHhcCC
Confidence 9999999 89 999999999999887664333332223222889999999999999999999999999999998877665
Q ss_pred ccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCC
Q 014172 331 FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKI 410 (429)
Q Consensus 331 ~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~ 410 (429)
.+++.+.|.++.++|+. .+++++.+++++++++.+.+.|+++ |+++.++. ++|+|++++.
T Consensus 242 --~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~-~~~~~~~~~~------------ 301 (354)
T 3ly1_A 242 --EKINFSGVDAALASMND----SAFITYSKKSNDVSRQILLKALEDL-KLPYLPSE-GNFVFHQLVV------------ 301 (354)
T ss_dssp --SCCCHHHHHHHHHHTTC----HHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCCCC-SSEEEEECSS------------
T ss_pred --CCCCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHHC-CCeECCCC-ceEEEEECCC------------
Confidence 56899999999999985 5889999999999999999999988 88887554 4568999873
Q ss_pred CChHHHHHHHHHhCCeecC
Q 014172 411 ENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 411 ~~~~~~~~~Ll~~~gV~v~ 429 (429)
+..++++.|.++ ||.+.
T Consensus 302 -~~~~~~~~l~~~-gi~v~ 318 (354)
T 3ly1_A 302 -PLKDYQTHMADA-GVLIG 318 (354)
T ss_dssp -CHHHHHHHHHHT-TEECC
T ss_pred -CHHHHHHHHHHC-CEEEe
Confidence 578899988865 99863
No 60
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=8.5e-42 Score=334.82 Aligned_cols=324 Identities=18% Similarity=0.263 Sum_probs=266.2
Q ss_pred CcccccccCCchhHHHH-HHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHH
Q 014172 68 LSPRVNAVKPSKTVAIT-DQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLK 146 (429)
Q Consensus 68 ~s~~~~~~~~~~~~~~~-~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~ 146 (429)
++++++.+.++...... +..++ ..++++|+|+.|++++++|+.+.+++.+.+. ....| +..+..++|+++++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~-~~~~y-~~~~~~~lr~~la~~~~ 81 (363)
T 3ffh_A 6 WKKSLAGLSSYKPGKREEEVMAE--LGLTKITKLSSNENPLGTSKKVAAIQANSSV-ETEIY-PDGWASSLRKEVADFYQ 81 (363)
T ss_dssp CCGGGTTCCC----CHHHHHHHT--TTCSCCEECSSCSCTTCCCHHHHHHHHTCBS-CCCBC-----CHHHHHHHHHHHT
T ss_pred hhHHHHhCCCCCCCCCHHHHHHh--cCCCceEEccCCCCCCCCCHHHHHHHHHHHH-HhhcC-CCcchHHHHHHHHHHhC
Confidence 56677777766433221 12111 1235799999999999999999999988654 34556 66789999999999984
Q ss_pred hhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 147 EENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 147 ~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
+++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|++++.+|+++ ++.+|+++++++++
T Consensus 82 ------~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~ 153 (363)
T 3ffh_A 82 ------LEEEELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQ--DGEHDLEGMLNAID 153 (363)
T ss_dssp ------CCGGGEEEESSHHHHHHHHHHHHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECCT--TSCCCHHHHHHHCC
T ss_pred ------CChhhEEEeCCHHHHHHHHHHHHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCC--CCCcCHHHHHHhcc
Confidence 5678999999999999999999999999999999999999999999999999999874 46799999999999
Q ss_pred cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccc
Q 014172 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (429)
Q Consensus 227 ~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 306 (429)
+++++|++++|+||||.+++.+++.+|++.|++ |+++|+||+|.++.+ +. ..+........++++++.||||.+|+
T Consensus 154 ~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~--~~~li~De~~~~~~~-~~-~~~~~~~~~~~~~~i~~~s~sK~~g~ 229 (363)
T 3ffh_A 154 EKTTIVWICNPNNPTGNYIELADIQAFLDRVPS--DVLVVLDEAYIEYVT-PQ-PEKHEKLVRTYKNLIITRTFSKIYGL 229 (363)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHTTSCT--TSEEEEECTTGGGCS-SC-CCCCGGGGGTCTTEEEEEESSSTTCC
T ss_pred cCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCC--CcEEEEeCchHhhcC-cc-ccCHHHHhhcCCCEEEEeechhhhcC
Confidence 999999999999999999998888888887754 799999999999887 43 23333443446899999999999999
Q ss_pred ccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC
Q 014172 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (429)
Q Consensus 307 ~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p 386 (429)
+|+|+||+++++++++.+..... .++++.+.+.++.++|+. .+++++.+++++++++++.+.|++++|+++.++
T Consensus 230 ~G~r~G~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~ 303 (363)
T 3ffh_A 230 ASARVGYGIADKEIIRQLNIVRP--PFNTTSIGQKLAIEAIKD----QAFIGECRTSNANGIKQYEAFAKRFEKVKLYPA 303 (363)
T ss_dssp SSCCCEEEEECHHHHHHHHHTCC--SCCCBHHHHHHHHHHHHC----HHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCC
T ss_pred chhceeeeecCHHHHHHHHHhCC--CCCCCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHhhCCCceECCC
Confidence 99999999999999999887765 456899999999999985 688999999999999999999999669998766
Q ss_pred CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 387 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+ +|+|++++. +..+++++|.++ ||.+
T Consensus 304 ~~-~~~~~~~~~-------------~~~~~~~~l~~~-gi~v 330 (363)
T 3ffh_A 304 NG-NFVLIDLGI-------------EAGTIFSYLEKN-GYIT 330 (363)
T ss_dssp CS-SEEEEECSS-------------CHHHHHHHHHHT-TEEC
T ss_pred CC-eEEEEECCC-------------CHHHHHHHHHHC-CeEE
Confidence 55 568999873 578999998875 8876
No 61
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=4.6e-43 Score=351.37 Aligned_cols=320 Identities=14% Similarity=0.159 Sum_probs=258.8
Q ss_pred HHHHHHHHhcCCCeEEcCCCCCC---CCChHHHHHHHHHHH--Hc--CCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCC
Q 014172 84 TDQATALAQAGVSVIRLAAGEPD---FDTPVLIAEAGINAI--RE--GFTRYTPNAGTLELRSAICHKLKEENGLSYTPD 156 (429)
Q Consensus 84 ~~~~~~~~~~g~~~i~L~~g~~~---~~~p~~v~~a~~~~~--~~--~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~ 156 (429)
...+.++...| .+|+|+.|+|+ +++|+.+.+++.+.+ .. ...+|++..|..+||++|++++. ++++
T Consensus 22 ~~~~~~l~~~~-~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~------~~~~ 94 (422)
T 3d6k_A 22 TAKYAELKAKN-LSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEALG------LPAD 94 (422)
T ss_dssp HHHHHHHHHTT-CCEECCCCSCCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHHT------CCGG
T ss_pred HHHHHHHhccC-CeEeCCCCCCChhhCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHhC------CChh
Confidence 34455555544 48999999998 777778888776542 12 24689999999999999999983 5788
Q ss_pred cEEEecChHHHH--HHHHHHhcCC------------CCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHH
Q 014172 157 QILVSNGAKQSI--LQAVLAVCSP------------GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLE 222 (429)
Q Consensus 157 ~i~~t~G~~~al--~~~l~~l~~~------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~ 222 (429)
+|++|+|+++++ .+++.+++++ +|+|++++|+|..|...++..|++++.+|++.+ ++|++.++
T Consensus 95 ~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~ 171 (422)
T 3d6k_A 95 LVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDE---GPDMGVVR 171 (422)
T ss_dssp GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHH
T ss_pred HEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCCC---CCCHHHHH
Confidence 999999999987 6677777765 358999999999999999999999999998653 28999999
Q ss_pred hhccc-CCcEEE-EcCCCCCccCCCCHHHHHHHHHHHH-hCCCeEEEEccCCcc--cccCCCCCCccccC---CCCCCce
Q 014172 223 SKLTE-KSRLLI-LCSPSNPTGSVYPKNLLDEIARIVA-KHPRLLVLSDEIYEH--IIYAPATHTSFASL---PGMWERT 294 (429)
Q Consensus 223 ~~l~~-~~~~i~-l~~p~NPtG~~~~~~~l~~I~~~a~-~~~~i~vi~Deay~~--~~~~~~~~~~~~~~---~~~~~~~ 294 (429)
+.+++ ++++|+ +++||||||.+++.+++++|+++|+ +| |++||+||+|.+ +.+++....++..+ .+..+++
T Consensus 172 ~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~-~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (422)
T 3d6k_A 172 ELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAP-DFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRF 250 (422)
T ss_dssp HHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSST-TCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCE
T ss_pred HHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhcc-CCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcE
Confidence 99975 789988 6999999999999999999999999 99 999999999986 43333233344322 2236889
Q ss_pred EEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhc-CCCChHHHHHHHHHHHHHHHHHHH
Q 014172 295 LTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL-GYAGGEVVSKMVKAFRERRDFLVK 373 (429)
Q Consensus 295 i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~-~~~~~~~~~~~~~~~~~~r~~l~~ 373 (429)
++++||||. +++|+|+||+++++++++.+.......+.+++.++|.++..+|+. +.. .++++++++.|+++++.+.+
T Consensus 251 i~~~S~SK~-~~~GlriG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~-~~~~~~~~~~~~~~~~~l~~ 328 (422)
T 3d6k_A 251 WFMSSTSKI-THAGSGVSFFASSKENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGL-KAHMLKHAASLAPKFERVLE 328 (422)
T ss_dssp EEEEESTTT-SCTTSSCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcChhhh-cCcccceEEEEeCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchH-HHHHHHHHHHHHHHHHHHHH
Confidence 999999999 679999999999999999999888777788999999999999975 111 46788889999999999888
Q ss_pred Hhcc----CCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 374 SFGE----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 374 ~L~~----l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
.|.+ ++++.+..|++|+|+|++++.. +..++.+. ++++||.+.
T Consensus 329 ~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~------------~~~~~~~~-l~~~gV~v~ 375 (422)
T 3d6k_A 329 ILDSRLSEYGVAKWTSPTGGYFISVDVVPG------------TASRVVEL-AKEAGIALT 375 (422)
T ss_dssp HHHHHHGGGTCEEECCCSBSSCEEEEESTT------------CHHHHHHH-HHHTTEECC
T ss_pred HHHHhcCcCCceEEeCCCcceEEEEECCCC------------CHHHHHHH-HHHCCeEEE
Confidence 8865 3346777899999999999742 45566654 556699863
No 62
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=3.7e-42 Score=346.06 Aligned_cols=323 Identities=20% Similarity=0.341 Sum_probs=267.3
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCC------------CCCCCCCCCHHHHHHHHHHHHhhcC--CCCCCCcEEEe
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGF------------TRYTPNAGTLELRSAICHKLKEENG--LSYTPDQILVS 161 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~------------~~Y~~~~G~~~lr~~ia~~l~~~~g--~~~~~~~i~~t 161 (429)
.+|+|+.+++.+. ++.+.+++.+...... .+|++..|..+||+++++++.+.+| +++++++|++|
T Consensus 39 ~~i~lg~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~~~ 117 (435)
T 3piu_A 39 GIIQMGLAENQLC-FDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLT 117 (435)
T ss_dssp SBEECSSCCCCSS-HHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEE
T ss_pred CeEEecccccccc-HHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEEEc
Confidence 5899999998776 6667777665432111 4698889999999999999986554 55678999999
Q ss_pred cChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHH-HcCCEEEEecCCCCCCCCCCHHHHHhhccc------CCcEEEE
Q 014172 162 NGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR-IADATPVILPTRISENFLLDPKVLESKLTE------KSRLLIL 234 (429)
Q Consensus 162 ~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~~~~i~l 234 (429)
+|+++++..++.+++++||.|+++.|+|.++...+. ..|++++.++++.+++|.+|++.|++++++ ++++|++
T Consensus 118 ~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i 197 (435)
T 3piu_A 118 AGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLV 197 (435)
T ss_dssp EHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEE
Confidence 999999999999999999999999999999998888 789999999998777788999999999875 7899999
Q ss_pred cCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCC---------CCceEEEeccChhcc
Q 014172 235 CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM---------WERTLTVNGFSKAFA 305 (429)
Q Consensus 235 ~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~---------~~~~i~~~S~SK~~~ 305 (429)
++|+||||.+++.+++++|+++|++| |+++|+||+|..+.|++....++..+... .+++++++||||.+|
T Consensus 198 ~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g 276 (435)
T 3piu_A 198 TNPSNPLGTTMTRNELYLLLSFVEDK-GIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLG 276 (435)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSC
T ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHc-CCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccC
Confidence 99999999999999999999999999 99999999999998887655555544332 578899999999999
Q ss_pred cccceeeEEEc-CHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceee
Q 014172 306 MTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (429)
Q Consensus 306 ~~G~R~G~v~~-~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~ 384 (429)
++|+|+||+++ ++++++.+.+.... .+.+.+.|.++.+++......++++++++++++++++.+.+.|+++ |+++.
T Consensus 277 ~~G~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 353 (435)
T 3piu_A 277 LPGFRVGAIYSNDDMVVAAATKMSSF--GLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS-GISCL 353 (435)
T ss_dssp CGGGCEEEEEESCHHHHHHHHHHGGG--SCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEEC
T ss_pred CCceeEEEEEeCCHHHHHHHHHHhhc--CCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCccc
Confidence 99999999999 56777777765443 3467889999888887521113356788899999999999999998 89999
Q ss_pred cCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 385 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 385 ~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+++|+|+|++++..... ....+..+++++|++++||.+
T Consensus 354 ~~~~g~~~~~~l~~~~~~-----~~~~~~~~~~~~l~~~~gi~v 392 (435)
T 3piu_A 354 NGNAGLFCWVDMRHLLRS-----NTFEAEMELWKKIVYEVHLNI 392 (435)
T ss_dssp CCCSSSEEEEECGGGSSS-----SSHHHHHHHHHHHHHTSCEEC
T ss_pred CCCeeEEEEEEccccccc-----CCchhHHHHHHHHHHHCCEEE
Confidence 999999999999863110 000135689999999889986
No 63
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=1.5e-45 Score=365.71 Aligned_cols=317 Identities=24% Similarity=0.385 Sum_probs=275.8
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 175 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l 175 (429)
++|+|+.|++++++|+.+.+++.+.+......|++. ..++|+++++++.+.+|..+++++|++|+|+++++.++++++
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~ 109 (392)
T 3b1d_A 32 QLLPAWIADMDFEVMPEVKQAIHDYAEQLVYGYTYA--SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAF 109 (392)
Confidence 789999999999999999999999887666778654 789999999999988887778899999999999999999999
Q ss_pred cCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCC-CCCCCCHHHHHhhcc-cCCcEEEEcCCCCCccCCCCHHHHHHH
Q 014172 176 CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRIS-ENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEI 253 (429)
Q Consensus 176 ~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~e~l~~~l~-~~~~~i~l~~p~NPtG~~~~~~~l~~I 253 (429)
+++||+|+++.|+|.++...++..|++++.++++++ ++|.+|++.+++.++ +++++|++++|+||||.+++.+++++|
T Consensus 110 ~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~l 189 (392)
T 3b1d_A 110 TKEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQI 189 (392)
Confidence 999999999999999999999999999999998543 347789999999987 678999999999999999999999999
Q ss_pred HHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCC-CCceEEEeccChhcccccceeeEEEcCH-HHHHHHHHHhhcc
Q 014172 254 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM-WERTLTVNGFSKAFAMTGWRLGYIAGPK-HFVAACNKIQSQF 331 (429)
Q Consensus 254 ~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~R~G~v~~~~-~~~~~l~~~~~~~ 331 (429)
+++|++| |+++|+||+|.++.+++....++..+... .++++++.||||.+|++|+|+||+++++ ++++.+......+
T Consensus 190 ~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~ 268 (392)
T 3b1d_A 190 GHLCQKH-HVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVN 268 (392)
Confidence 9999999 99999999999998877555566555432 5789999999999999999999999875 4888888776655
Q ss_pred c-CCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc-CCCceeecCCceEEEEEecCCccCCcccCCCC
Q 014172 332 T-SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK 409 (429)
Q Consensus 332 ~-~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~ 409 (429)
+ .+++.++|.++.++|+. .+++++++++.++++++.+.+.|++ +||+++.+|+++|++|++++.. +
T Consensus 269 ~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~i~~~~~-~-------- 336 (392)
T 3b1d_A 269 NHHEVSSLGYIATETAYRY---GKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGTYLIWLDFSDY-G-------- 336 (392)
Confidence 4 35688899999888875 3678889999999999999999998 7899999999999999998742 0
Q ss_pred CCChHHHHHHHHHhCCeec
Q 014172 410 IENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 410 ~~~~~~~~~~Ll~~~gV~v 428 (429)
.+..+++++|++++||.+
T Consensus 337 -~~~~~l~~~l~~~~gi~v 354 (392)
T 3b1d_A 337 -LTDDALFTLLHDQAKVIL 354 (392)
Confidence 156789999886668876
No 64
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=7e-41 Score=327.76 Aligned_cols=298 Identities=17% Similarity=0.289 Sum_probs=257.9
Q ss_pred cCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHH
Q 014172 93 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 172 (429)
Q Consensus 93 ~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l 172 (429)
.|+++|+|+.|++++++|+.+.+++.+.+.. ...| +..+..++|+++++++. +++++|++|+|+++++..++
T Consensus 24 ~~~~~idl~~~~~~~~~~~~v~~a~~~~~~~-~~~y-~~~~~~~l~~~la~~~~------~~~~~i~~~~g~t~al~~~~ 95 (361)
T 3ftb_A 24 KGRELLDYSSNINPLGIPKSFLNNIDEGIKN-LGVY-PDVNYRRLNKSIENYLK------LKDIGIVLGNGASEIIELSI 95 (361)
T ss_dssp ----CEETTCCCCTTCSCHHHHTTHHHHHHG-GGSC-CCTTCHHHHHHHHHHHT------CCSCEEEEESSHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCCCCHHHHHHHHHHHHH-hcCC-CCccHHHHHHHHHHHhC------CCcceEEEcCCHHHHHHHHH
Confidence 5678999999999999999999999998876 4567 66789999999999983 57889999999999999988
Q ss_pred HHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHH
Q 014172 173 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 252 (429)
Q Consensus 173 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~ 252 (429)
+++ |+|+++.|+|.++...++..|++++.++++.+++ ++++++++++++ ++++++++||||||.+++.+++++
T Consensus 96 ~~~----d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l~~ 168 (361)
T 3ftb_A 96 SLF----EKILIIVPSYAEYEINAKKHGVSVVFSYLDENMC--IDYEDIISKIDD-VDSVIIGNPNNPNGGLINKEKFIH 168 (361)
T ss_dssp TTC----SEEEEEESCCTHHHHHHHHTTCEEEEEECCTTSC--CCHHHHHHHTTT-CSEEEEETTBTTTTBCCCHHHHHH
T ss_pred HHc----CcEEEecCChHHHHHHHHHcCCeEEEeecCcccC--CCHHHHHHhccC-CCEEEEeCCCCCCCCCCCHHHHHH
Confidence 887 9999999999999999999999999999876544 678999999988 999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEE-cCHHHHHHHHHHhhcc
Q 014172 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA-GPKHFVAACNKIQSQF 331 (429)
Q Consensus 253 I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~-~~~~~~~~l~~~~~~~ 331 (429)
|+++|++| |+++|+||+|.++.++ ...+........++++++.||||.+|++|+|+||++ +++++++.+......
T Consensus 169 i~~~~~~~-~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~~- 244 (361)
T 3ftb_A 169 VLKLAEEK-KKTIIIDEAFIEFTGD--PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNP- 244 (361)
T ss_dssp HHHHHHHH-TCEEEEECSSGGGTCC--TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSCT-
T ss_pred HHHHhhhc-CCEEEEECcchhhcCC--cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCCC-
Confidence 99999999 9999999999998876 233444444456889999999999999999999998 899999998876553
Q ss_pred cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCce-eecCCceEEEEEecCCccCCcccCCCCC
Q 014172 332 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFSTYYGSEAEGFGKI 410 (429)
Q Consensus 332 ~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~-~~~p~~~~~~~~~l~~~~~~~~~~~~~~ 410 (429)
++++.+.+.++.++|+. .+++++.+++++++++.+.+.|++++++. +.++.++ |+|++++..
T Consensus 245 -~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~~----------- 307 (361)
T 3ftb_A 245 -WNINCFAEMAAINCLKD----TNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPHAN-FVLCRLENI----------- 307 (361)
T ss_dssp -TCSCHHHHHHHHHTSSC----HHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECCSSS-EEEEEESSS-----------
T ss_pred -CCCCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCe-EEEEEcCCC-----------
Confidence 46889999999999884 68899999999999999999999998898 7666665 588888752
Q ss_pred CChHHHHHHHHHhCCeec
Q 014172 411 ENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 411 ~~~~~~~~~Ll~~~gV~v 428 (429)
+..+++++|+++ ||.+
T Consensus 308 -~~~~l~~~l~~~-gi~v 323 (361)
T 3ftb_A 308 -SGEKLYDSLLKE-DIVI 323 (361)
T ss_dssp -CHHHHHHHHHTT-TEEC
T ss_pred -CHHHHHHHHHHC-CeEE
Confidence 688999999887 9976
No 65
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.3e-42 Score=348.43 Aligned_cols=309 Identities=14% Similarity=0.129 Sum_probs=257.8
Q ss_pred CCeEEcCCCCCCCCCh---HHHHHHH--HHHHHc---CCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHH
Q 014172 95 VSVIRLAAGEPDFDTP---VLIAEAG--INAIRE---GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p---~~v~~a~--~~~~~~---~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~ 166 (429)
...|+|+.|.|+.... +.+.+++ .+++.+ ...+|++..|..+||++|++++. +++++|++|+|+++
T Consensus 33 ~~~i~~~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~------~~~~~i~~t~G~~~ 106 (427)
T 3ppl_A 33 NLKLDLTRGKPSSEQLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLLG------VPVEQVLAGDASSL 106 (427)
T ss_dssp CCCEECCCCSCCHHHHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHHT------SCGGGEEECSSCHH
T ss_pred CceEecCCCCCChHHCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHhC------CCcceEEEeCCcHH
Confidence 3589999999986553 2466665 444433 24789888999999999999983 67899999999999
Q ss_pred HH--HHHHHHhcC--C----------CCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc-cCCcE
Q 014172 167 SI--LQAVLAVCS--P----------GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT-EKSRL 231 (429)
Q Consensus 167 al--~~~l~~l~~--~----------gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~-~~~~~ 231 (429)
++ .++++++++ + ||+|++++|+|..|...++..|++++.+|++.+ ++|++.|+++++ +++++
T Consensus 107 al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~~~ 183 (427)
T 3ppl_A 107 NIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPMNED---GPDMDAVEELVKNPQVKG 183 (427)
T ss_dssp HHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEEEEETT---EECHHHHHHHTTSTTEEE
T ss_pred HHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCC---CCCHHHHHHHHhcCCCeE
Confidence 99 578888877 6 899999999999999999999999999998753 289999999995 67888
Q ss_pred EEE-cCCCCCccCCCCHHHHHHHHHHH-HhCCCeEEEEccCCcccccCCCCC--CccccC---CCCCCceEEEeccChhc
Q 014172 232 LIL-CSPSNPTGSVYPKNLLDEIARIV-AKHPRLLVLSDEIYEHIIYAPATH--TSFASL---PGMWERTLTVNGFSKAF 304 (429)
Q Consensus 232 i~l-~~p~NPtG~~~~~~~l~~I~~~a-~~~~~i~vi~Deay~~~~~~~~~~--~~~~~~---~~~~~~~i~~~S~SK~~ 304 (429)
|++ ++||||||.+++.+++++|+++| ++| |++||+||+|.++.|++... .++..+ .+..+++++++||||.
T Consensus 184 v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~- 261 (427)
T 3ppl_A 184 MWVVPVFSNPTGFTVTEDVAKRLSAMETAAP-DFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKI- 261 (427)
T ss_dssp EEECCSSCTTTCCCCCHHHHHHHHHCCCSST-TCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTT-
T ss_pred EEECCCCCCCCCccCCHHHHHHHHHHHhhcC-CCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhc-
Confidence 885 48999999999999999999999 999 99999999999988876432 234333 1246899999999999
Q ss_pred ccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhc-CCCChHHHHHHHHHHHHHHHHHHHHhcc-C---C
Q 014172 305 AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL-GYAGGEVVSKMVKAFRERRDFLVKSFGE-L---E 379 (429)
Q Consensus 305 ~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~-~~~~~~~~~~~~~~~~~~r~~l~~~L~~-l---~ 379 (429)
+++|+|+||+++++++++.+.........+++.+.|.++..++.. +. ..+++++.++.|+++++.+.+.|.+ + +
T Consensus 262 ~~~G~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~ 340 (427)
T 3ppl_A 262 TLAGAGVSFFLTSAENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEG-VRAVMRKHAASLAPKFNKVLEILDSRLAEYG 340 (427)
T ss_dssp SCTTSSCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred cCcCccEEEEEcCHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhh-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 679999999999999999999888878888999999999999985 11 1467888999999999999888865 3 3
Q ss_pred CceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 380 GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 380 g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++.+..|++|+|+|++++.. +..++.+.|. ++||.+
T Consensus 341 ~~~~~~p~~g~~~~~~~~~~------------~~~~~~~~l~-~~gv~v 376 (427)
T 3ppl_A 341 VAQWTVPAGGYFISLDVVPG------------TASRVAELAK-EAGIAL 376 (427)
T ss_dssp CCEECCCSBSSCEEEECSTT------------CHHHHHHHHH-HTTEEC
T ss_pred ceEEeCCCccEEEEEECCcc------------hHHHHHHHHH-HCCCEE
Confidence 57888899999999999853 5778887765 459986
No 66
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=1.4e-41 Score=334.85 Aligned_cols=289 Identities=21% Similarity=0.314 Sum_probs=256.8
Q ss_pred HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH
Q 014172 115 EAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE 194 (429)
Q Consensus 115 ~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~ 194 (429)
+++.+.+..+...|++..|..+||+++++++. .+++++|++|+|+++++..++++++++||+|+++.|+|.++..
T Consensus 46 ~~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~-----~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~ 120 (375)
T 3op7_A 46 EDFYKKLQGTKLNYGWIEGSPAFKKSVSQLYT-----GVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYD 120 (375)
T ss_dssp HHHHHHHHTSCCSSCCTTCCHHHHHHHHTTSS-----SCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHH
T ss_pred HHHHHHHhcCCcCCCCCCChHHHHHHHHHHhc-----cCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHH
Confidence 35566666777899999999999999999873 2577899999999999999999999999999999999999999
Q ss_pred HHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCccc
Q 014172 195 MARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI 274 (429)
Q Consensus 195 ~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~ 274 (429)
.++..|++++.++++.+++|.+|++.+++++++++++|++++|+||||.+++.+++++|.++|++| |+++|+||+|..+
T Consensus 121 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~-~~~li~De~~~~~ 199 (375)
T 3op7_A 121 IPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEV-GAYILSDEVYRSF 199 (375)
T ss_dssp HHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTT-TCEEEEECCSCCC
T ss_pred HHHHcCCEEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHc-CCEEEEEcccccc
Confidence 999999999999998777788999999999999999999999999999999999999999999999 9999999999998
Q ss_pred ccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCCh
Q 014172 275 IYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGG 354 (429)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~ 354 (429)
.++ ...++... .+++++++||||.+|++|+|+||+++++++++.+.........+++.+.+.++..++.. .+
T Consensus 200 ~~~--~~~~~~~~---~~~~i~~~s~sK~~~~~G~r~G~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~ 271 (375)
T 3op7_A 200 SEL--DVPSIIEV---YDKGIAVNSLSKTYSLPGIRIGWVAANHQVTDILRDYRDYTMICAGVFDDLVAQLALAH---YQ 271 (375)
T ss_dssp SSS--CCCCHHHH---CTTEEEEEESSSSSSCGGGCCEEEECCHHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHT---HH
T ss_pred ccc--CCCchhhh---cCCEEEEeEChhhcCCcccceEEEEeCHHHHHHHHHHHhhhccCCCcHHHHHHHHHHhc---cH
Confidence 765 22233322 57889999999999999999999999999999998888777788899999999998886 46
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 355 EVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 355 ~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+++++.++.++++++.+.+.|++.+++.+..|.+++++|+.++.. .+..+++++|++++||.+
T Consensus 272 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ll~~~gi~v 334 (375)
T 3op7_A 272 EILERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVD-----------MPMEDFCLQLLQEHGVLL 334 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCS-----------SCHHHHHHHHHHHHCEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCC-----------CCHHHHHHHHHHhCCEEE
Confidence 788899999999999999999998899998999999999988743 368899999987779976
No 67
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=7.3e-42 Score=339.01 Aligned_cols=338 Identities=15% Similarity=0.124 Sum_probs=266.2
Q ss_pred ccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCC---CC--CChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHH
Q 014172 70 PRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP---DF--DTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICH 143 (429)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~---~~--~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~ 143 (429)
+++..++++.+..+...+.. ..++++|+|+.|++ +. ++++.+.+++.+.+.. ...+|++..|..++|+++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~ 80 (394)
T 2ay1_A 3 GNLKPQAPDKILALMGEFRA--DPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGE 80 (394)
T ss_dssp GGCCCCCCCSHHHHHHHHHH--CCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHH
T ss_pred ccCccCCCccHHHHHHHHHh--CCCccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHH
Confidence 56777888877777665553 24667999999984 22 4568999999888764 45679888999999999999
Q ss_pred HHHhhcCCCCCCCcEEE--ecChHHHHHHHHHHhcC--CCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHH
Q 014172 144 KLKEENGLSYTPDQILV--SNGAKQSILQAVLAVCS--PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPK 219 (429)
Q Consensus 144 ~l~~~~g~~~~~~~i~~--t~G~~~al~~~l~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e 219 (429)
++... + +++++|++ |+|+++++.++++.++. +||+|+++.|+|.++...++..|++++.++++.++++.+|++
T Consensus 81 ~~~~~-~--~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 157 (394)
T 2ay1_A 81 LILGD-G--LKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFE 157 (394)
T ss_dssp HHHGG-G--CCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHH
T ss_pred HHhCC-C--CCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHH
Confidence 98432 2 36789999 99999999999888754 999999999999999999999999999999865556789999
Q ss_pred HHHhhccc---CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCC-CCCccccCCCCCCceE
Q 014172 220 VLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA-THTSFASLPGMWERTL 295 (429)
Q Consensus 220 ~l~~~l~~---~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~-~~~~~~~~~~~~~~~i 295 (429)
.+++.+++ +++++++++||||||.+++.+++++|+++|++| |+++|+||+|.++.+++. ...++..+....++++
T Consensus 158 ~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i 236 (394)
T 2ay1_A 158 GMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKT-GALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVL 236 (394)
T ss_dssp HHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEE
T ss_pred HHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEecCccccccCcccchHHHHHHhhcCCCEE
Confidence 99999864 356677799999999999999999999999999 999999999999877531 1223333322246789
Q ss_pred EEeccChhcccccceeeEEEc---CHHHHHHH----HHHhhcccCCCchHHHHHHHHHHhcCCC---ChHHHHHHHHHHH
Q 014172 296 TVNGFSKAFAMTGWRLGYIAG---PKHFVAAC----NKIQSQFTSGASSISQKAGVAALGLGYA---GGEVVSKMVKAFR 365 (429)
Q Consensus 296 ~~~S~SK~~~~~G~R~G~v~~---~~~~~~~l----~~~~~~~~~~~~~~~q~aa~~~l~~~~~---~~~~~~~~~~~~~ 365 (429)
+++||||.+|++|+|+||+++ ++++++.+ .........+++.++|.++.++|+.... ..+++++++++++
T Consensus 237 ~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~ 316 (394)
T 2ay1_A 237 IAASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGML 316 (394)
T ss_dssp EEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccCCCcCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998 66654443 3333344445689999999999985100 0357888999999
Q ss_pred HHHHHHHHHhccCC---CceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 366 ERRDFLVKSFGELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 366 ~~r~~l~~~L~~l~---g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
++++++.+.|+++. ++++..|++|+|+|++++ .. .+.++++++||.+.
T Consensus 317 ~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~---------------~~-~~~~~l~~~gi~v~ 367 (394)
T 2ay1_A 317 RLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGAT---------------PE-QVKRIKEEFGIYMV 367 (394)
T ss_dssp HHHHHHHHHHHHHHTSSTTTHHHHCCSSEEECCCC---------------HH-HHHHHHHHHCEECC
T ss_pred HHHHHHHHHHHhcCCCCCeeEEcCCceEEEeeCCC---------------HH-HHHHHHHhCCEEec
Confidence 99999999998863 488878899999998764 23 44566666699863
No 68
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=7.5e-41 Score=328.50 Aligned_cols=301 Identities=21% Similarity=0.293 Sum_probs=253.6
Q ss_pred hcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHH
Q 014172 92 QAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 171 (429)
Q Consensus 92 ~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~ 171 (429)
..|+++|+|+.|++++++|+.+.+++.+.+.. ..+|+ ..|..++|+++++++. +++++|++|+|+++++..+
T Consensus 21 ~~~~~~idl~~~~~~~~~~~~v~~a~~~~~~~-~~~y~-~~~~~~l~~~la~~~~------~~~~~v~~~~g~~~al~~~ 92 (364)
T 1lc5_A 21 ISPDQLLDFSANINPLGMPVSVKRALIDNLDC-IERYP-DADYFHLHQALARHHQ------VPASWILAGNGETESIFTV 92 (364)
T ss_dssp SCGGGSEECSSCCCTTCCCHHHHHHHHHTGGG-GGSCC-CTTCHHHHHHHHHHHT------SCGGGEEEESSHHHHHHHH
T ss_pred CCccceEEeccccCCCCCCHHHHHHHHHHHHH-hhcCC-CCCHHHHHHHHHHHHC------cCHHHEEECCCHHHHHHHH
Confidence 34567999999998888889999999887754 46784 4689999999999983 4678999999999999999
Q ss_pred HHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHH
Q 014172 172 VLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLD 251 (429)
Q Consensus 172 l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~ 251 (429)
++++ +||+|+++.|+|.++...++..|++++.+|++.++++.+ ++.+.+.++++++++++++||||||.+++.++++
T Consensus 93 ~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~ 169 (364)
T 1lc5_A 93 ASGL--KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQ 169 (364)
T ss_dssp HHHH--CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCCTTCCEEEEESSCTTTCCCCCHHHHH
T ss_pred HHHc--CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhccCCCCEEEEeCCCCCCCCCCCHHHHH
Confidence 9988 789999999999999999999999999999875445544 5766667777899999999999999999999999
Q ss_pred HHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEE-cCHHHHHHHHHHhhc
Q 014172 252 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA-GPKHFVAACNKIQSQ 330 (429)
Q Consensus 252 ~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~-~~~~~~~~l~~~~~~ 330 (429)
+|+++|++| |+++|+||+|.++.+++. ++..+....++++++.||||.+|++|+|+||++ +++++++.+.....
T Consensus 170 ~i~~~~~~~-~~~li~De~~~~~~~~~~---~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~- 244 (364)
T 1lc5_A 170 AIADRCKSL-NINLILDEAFIDFIPHET---GFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQM- 244 (364)
T ss_dssp HHHHHHHHH-TCEEEEECTTGGGSTTCC---CSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHHSC-
T ss_pred HHHHHhhhc-CcEEEEECcChhhccCcc---chhhHhccCCCEEEEEECchhhcCCccceEEEEECCHHHHHHHHHhCC-
Confidence 999999999 999999999999877532 222322335789999999999999999999999 99999998887654
Q ss_pred ccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCC
Q 014172 331 FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKI 410 (429)
Q Consensus 331 ~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~ 410 (429)
..+++.++|.++.++|+. .+++++.++.++++++.+.+.|+++||+++.++. ++|+|++++.
T Consensus 245 -~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-g~~~~~~~~~------------ 306 (364)
T 1lc5_A 245 -PWSVNALAALAGEVALQD----SAWQQATWHWLREEGARFYQALCQLPLLTVYPGR-ANYLLLRCER------------ 306 (364)
T ss_dssp -TTCSCHHHHHHHHHGGGC----HHHHHHHHHHHHHHHHHHHHHHHTSTTEEECCCS-SSEEEEEESC------------
T ss_pred -CCCCCHHHHHHHHHHHhC----cHHHHHHHHHHHHHHHHHHHHHhcCCCCEECCCC-CeEEEEECCC------------
Confidence 346889999999999985 5789999999999999999999998889887554 5568888863
Q ss_pred CChHHHHHHHHHhCCeec
Q 014172 411 ENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 411 ~~~~~~~~~Ll~~~gV~v 428 (429)
+..+++++|+++ ||.+
T Consensus 307 -~~~~l~~~l~~~-gi~v 322 (364)
T 1lc5_A 307 -EDIDLQRRLLTQ-RILI 322 (364)
T ss_dssp -TTCCHHHHHHTT-TEEC
T ss_pred -cHHHHHHHHHHC-CcEE
Confidence 244788888765 9876
No 69
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=4.2e-41 Score=335.92 Aligned_cols=315 Identities=18% Similarity=0.284 Sum_probs=250.3
Q ss_pred CCCeEEcCCCCCCCCCh--HHHHHHHHHHHHcCC-----CCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHH
Q 014172 94 GVSVIRLAAGEPDFDTP--VLIAEAGINAIREGF-----TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (429)
Q Consensus 94 g~~~i~L~~g~~~~~~p--~~v~~a~~~~~~~~~-----~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~ 166 (429)
++++|+|+.|.|+..++ +.+.+++.+.+.+.. ..|++..|..+||+++++++.+.+|+.+++++|++|+|+++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~ 109 (417)
T 3g7q_A 30 TPGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQS 109 (417)
T ss_dssp --CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHH
T ss_pred CCCceEecCcCCCCCChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHH
Confidence 35799999999987553 567777777765432 47999999999999999999999999899999999999999
Q ss_pred HHHHHHHHhcCCCC-----EEEEc-CCCCCChHHHHHH------cCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEE
Q 014172 167 SILQAVLAVCSPGD-----EVIIP-APFWVSYPEMARI------ADATPVILPTRISENFLLDPKVLESKLTEKSRLLIL 234 (429)
Q Consensus 167 al~~~l~~l~~~gd-----~Vlv~-~p~y~~~~~~~~~------~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l 234 (429)
++++++++++++|| +|+++ .|+|..|...+.. .+..++.++.+. .++.+|++.++ +++++++|++
T Consensus 110 al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~l~--~~~~~~~v~~ 186 (417)
T 3g7q_A 110 AFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQ-FKYHVDFEHLH--IGEETGMICV 186 (417)
T ss_dssp HHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGE-EEEECCGGGCC--CCTTEEEEEE
T ss_pred HHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCcc-cccccCHHHhc--cccCceEEEE
Confidence 99999999999987 89997 9999998876532 234444554321 24668999998 6778999999
Q ss_pred cCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEE
Q 014172 235 CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYI 314 (429)
Q Consensus 235 ~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v 314 (429)
++||||||.+++.+++++|+++|++| |+++|+||+|..+.. +...... .....++++++.|||| ++++|+|+||+
T Consensus 187 ~~p~NptG~~~~~~~~~~l~~~a~~~-~~~li~De~~~~~~~-~~~~~~~--~~~~~~~~i~~~s~sK-~~~~G~r~G~~ 261 (417)
T 3g7q_A 187 SRPTNPTGNVITDEELMKLDRLANQH-NIPLVIDNAYGVPFP-GIIFSEA--RPLWNPNIILCMSLSK-LGLPGSRCGII 261 (417)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHT-TCCEEEECTTCTTTT-CCBCSCC--CCCCCTTEEEEEESGG-GTCTTSCCEEE
T ss_pred CCCCCCCCCccCHHHHHHHHHHHHHc-CCEEEEeCCCccccc-ccccccc--ccCCCCCEEEEEechh-ccCCCcceEEE
Confidence 99999999999999999999999999 999999999986321 1111111 1123578999999999 68899999999
Q ss_pred EcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHH-HHHHHHHHHHHHHHHhcc-CC--CceeecCCceE
Q 014172 315 AGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK-MVKAFRERRDFLVKSFGE-LE--GVKMSEPQGAF 390 (429)
Q Consensus 315 ~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~-~~~~~~~~r~~l~~~L~~-l~--g~~~~~p~~~~ 390 (429)
++++++++.+......++.+++.+.|.++..+++.... .+++.+ +++.|+++++.+.+.|.+ ++ |+.+..|++|+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~ 340 (417)
T 3g7q_A 262 IANDKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDL-LRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAI 340 (417)
T ss_dssp ECCHHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCH-HHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSS
T ss_pred EeCHHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcch-HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcce
Confidence 99999999999888888888999999999999987432 344444 778899999999999877 55 47888899999
Q ss_pred EEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 391 YLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 391 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|+|++++.. + .+..+++++|.+ +||.+
T Consensus 341 ~~~~~~~~~-~---------~~~~~l~~~l~~-~gi~v 367 (417)
T 3g7q_A 341 FLWLWFKDL-P---------ITTELLYQRLKA-RGVLM 367 (417)
T ss_dssp EEEEECTTC-S---------SCHHHHHHHHHH-TTEEC
T ss_pred EEEEEcCCC-C---------CCHHHHHHHHHH-CCEEE
Confidence 999999852 0 268899998855 59976
No 70
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=4.7e-41 Score=338.70 Aligned_cols=345 Identities=15% Similarity=0.220 Sum_probs=270.6
Q ss_pred ccCcccccccC-CchhHHHHHHHHHHHhcCCCeE-EcCCCCCCCCCh--HHHHHHHHHHHHc-------C-----CCCCC
Q 014172 66 VSLSPRVNAVK-PSKTVAITDQATALAQAGVSVI-RLAAGEPDFDTP--VLIAEAGINAIRE-------G-----FTRYT 129 (429)
Q Consensus 66 ~~~s~~~~~~~-~~~~~~~~~~~~~~~~~g~~~i-~L~~g~~~~~~p--~~v~~a~~~~~~~-------~-----~~~Y~ 129 (429)
|++|++..++. ++.+..++....+... .+++| +|+.|.|+..++ +.+.+++.+.+.+ . ...|+
T Consensus 2 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 80 (444)
T 3if2_A 2 MKFSKFGQKFTQPTGISQLMDDLGDALK-SDQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYS 80 (444)
T ss_dssp CCCCHHHHHHHSCCHHHHHHHHHHHHHH-SSSCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCC
T ss_pred CCcchhhhhccCchhHHHHHHHHHhhhc-CchhhhccCCCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhccC
Confidence 45566655444 3555555544433322 36799 999999987543 5566666666554 2 25798
Q ss_pred CCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCC--------------EEEEc-CCCCCChHH
Q 014172 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGD--------------EVIIP-APFWVSYPE 194 (429)
Q Consensus 130 ~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd--------------~Vlv~-~p~y~~~~~ 194 (429)
+..|..+||+++|+++.+.+|+.+++++|++|+|+++++.+++++++++|| +|+++ .|+|..|..
T Consensus 81 ~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~ 160 (444)
T 3if2_A 81 NPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSD 160 (444)
T ss_dssp CTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTT
T ss_pred CCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhh
Confidence 899999999999999999999989999999999999999999999999998 78876 999999886
Q ss_pred H------HHHcCCEEEEecCCCCC---CCCCCHHHHHhh---cccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCC
Q 014172 195 M------ARIADATPVILPTRISE---NFLLDPKVLESK---LTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR 262 (429)
Q Consensus 195 ~------~~~~g~~~~~v~~~~~~---~~~~d~e~l~~~---l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~ 262 (429)
. +...|.+++.++.+.++ ++.+|++.|+++ +++++++|++++||||||.+++.+++++|+++|++| |
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~-~ 239 (444)
T 3if2_A 161 VHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRY-D 239 (444)
T ss_dssp CCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-T
T ss_pred cccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHC-C
Confidence 3 44568888888876422 357999999998 678899999999999999999999999999999999 9
Q ss_pred eEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHH
Q 014172 263 LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKA 342 (429)
Q Consensus 263 i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~a 342 (429)
++||+||+|+.+.. +...... .....+++++++||||. +++|+|+||+++++++++.+.......+.+++.+.|.+
T Consensus 240 ~~li~De~~~~~~~-~~~~~~~--~~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a 315 (444)
T 3if2_A 240 IPLIIDNAYGMPFP-NIIYSDA--HLNWDNNTILCFSLSKI-GLPGMRTGIIVADAKVIEAVSAMNAVVNLAPTRFGAAI 315 (444)
T ss_dssp CCEEEECTTCTTTT-CCBCSCC--CCCCCTTEEEEEESTTT-TCGGGCCEEEECCHHHHHHHHHHHHHHHSSCCCHHHHH
T ss_pred CEEEEECCCCCccc-ccccccc--cccCCCCEEEEechhhc-cCCCCceEEEEECHHHHHHHHHHHHhccCCCChHHHHH
Confidence 99999999986321 1111111 11235789999999997 77999999999999999999988877777889999999
Q ss_pred HHHHHhcCCCChHHHHH-HHHHHHHHHHHHHHHhcc-CC--CceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHH
Q 014172 343 GVAALGLGYAGGEVVSK-MVKAFRERRDFLVKSFGE-LE--GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCR 418 (429)
Q Consensus 343 a~~~l~~~~~~~~~~~~-~~~~~~~~r~~l~~~L~~-l~--g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 418 (429)
+..++..... .+++.+ +++.|+++++.+.+.|.+ ++ ++.+..|++++|+|++++.. + .+..++++
T Consensus 316 ~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~-~---------~~~~~l~~ 384 (444)
T 3if2_A 316 ATPLVANDRI-KQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDL-P---------ISTLDLYE 384 (444)
T ss_dssp HHHHHHTSHH-HHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTC-S---------SCHHHHHH
T ss_pred HHHHHHcCch-hHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEEEcCCC-C---------CCHHHHHH
Confidence 9999986321 233444 677889999999888876 55 46777899999999999852 0 26889999
Q ss_pred HHHHhCCeec
Q 014172 419 YLLDKAQVLL 428 (429)
Q Consensus 419 ~Ll~~~gV~v 428 (429)
.|.+ +||.+
T Consensus 385 ~l~~-~gi~v 393 (444)
T 3if2_A 385 RLKA-KGTLI 393 (444)
T ss_dssp HHHH-TTEEC
T ss_pred HHHH-CCeEE
Confidence 8855 59976
No 71
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=3.5e-42 Score=344.78 Aligned_cols=328 Identities=15% Similarity=0.169 Sum_probs=264.5
Q ss_pred cccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCC---CCChHHHHHHHH--HHHHcC--CCCC-CCCCCCHHHHHHHH
Q 014172 71 RVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPD---FDTPVLIAEAGI--NAIREG--FTRY-TPNAGTLELRSAIC 142 (429)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~---~~~p~~v~~a~~--~~~~~~--~~~Y-~~~~G~~~lr~~ia 142 (429)
++..++++.+.++.+... . ...|+|+.|.|+ ++.|+.+.+++. +.+..+ ..+| ++..|..+||++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~----~-~~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia 80 (423)
T 3ez1_A 6 ASRPALDLARQAYEAFKA----R-GLNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFA 80 (423)
T ss_dssp CCHHHHHHHHHHHHHHHH----H-TCCEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhc----C-CceEecCCCCCChHhCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHH
Confidence 344444444444433332 2 358999999999 777888888875 444332 3789 88899999999999
Q ss_pred HHHHhhcCCCCCCCcEEEecChHHHHH--HHHHHhcC--C---------CCEEEEcCCCCCChHHHHHHcCCEEEEecCC
Q 014172 143 HKLKEENGLSYTPDQILVSNGAKQSIL--QAVLAVCS--P---------GDEVIIPAPFWVSYPEMARIADATPVILPTR 209 (429)
Q Consensus 143 ~~l~~~~g~~~~~~~i~~t~G~~~al~--~~l~~l~~--~---------gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~ 209 (429)
+++. +++++|++|+|+++++. ++++++++ + ||+|++++|+|..|...++..|++++.+|++
T Consensus 81 ~~~~------~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~ 154 (423)
T 3ez1_A 81 GYLD------VKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQ 154 (423)
T ss_dssp HHTT------SCGGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEE
T ss_pred HHhC------CChhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCC
Confidence 9973 57889999999999998 88999888 8 5999999999999999999999999999987
Q ss_pred CCCCCCCCHHHHHhhc--ccCCcEEEE-cCCCCCccCCCCHHHHHHHHHHH-HhCCCeEEEEccCCcccccCC-C--CCC
Q 014172 210 ISENFLLDPKVLESKL--TEKSRLLIL-CSPSNPTGSVYPKNLLDEIARIV-AKHPRLLVLSDEIYEHIIYAP-A--THT 282 (429)
Q Consensus 210 ~~~~~~~d~e~l~~~l--~~~~~~i~l-~~p~NPtG~~~~~~~l~~I~~~a-~~~~~i~vi~Deay~~~~~~~-~--~~~ 282 (429)
.+ ++|++.|++++ .+++++|++ ++||||||.+++.+++++|+++| ++| |++||+||+|..+.|.+ . ...
T Consensus 155 ~~---g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~-~~~li~De~y~~~~~~~~~~~~~~ 230 (423)
T 3ez1_A 155 SD---GPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAP-DFTIFADDAYRVHHLVEEDRAEPV 230 (423)
T ss_dssp TT---EECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSST-TCEEEEECTTSSCBCCSSSCCCCC
T ss_pred CC---CCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhcc-CCEEEEECCcchhhcCCCCCCCCc
Confidence 53 38999999999 578899875 69999999999999999999999 999 99999999999766554 2 223
Q ss_pred ccccC---CCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhc--CCCChHHH
Q 014172 283 SFASL---PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL--GYAGGEVV 357 (429)
Q Consensus 283 ~~~~~---~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~--~~~~~~~~ 357 (429)
++..+ .+..+++++++||||. +++|+|+||+++++++++.+.........+++.+.|.++..+++. +.. .+++
T Consensus 231 ~~~~~~~~~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~-~~~~ 308 (423)
T 3ez1_A 231 NFVVLARDAGYPDRAFVFASTSKI-TFAGAGLGFVASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGL-EGLM 308 (423)
T ss_dssp CHHHHHHHHTCTTSEEEEEESTTT-SCSSSSCEEEEECHHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHH-HHHH
T ss_pred chhhhhhccCCCCeEEEEeCchhh-ccCCcceEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccchH-HHHH
Confidence 33332 1236899999999999 569999999999999999999888888888999999999999885 221 5678
Q ss_pred HHHHHHHHHHHHHHHHHhcc----CC-CceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 358 SKMVKAFRERRDFLVKSFGE----LE-GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 358 ~~~~~~~~~~r~~l~~~L~~----l~-g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++.++.|+++++.+.+.|.+ ++ ++.+..|++|+|+|++++.. +..++.+.| +++||.+
T Consensus 309 ~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~------------~~~~~~~~l-~~~gv~v 371 (423)
T 3ez1_A 309 RDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEP------------VADRVVKLA-EAAGVSL 371 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESSS------------CHHHHHHHH-HHTTEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCCC------------cHHHHHHHH-HHCCcEE
Confidence 88888999998888877765 42 37788899999999999852 566666665 4559986
No 72
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=2.6e-40 Score=324.73 Aligned_cols=298 Identities=24% Similarity=0.406 Sum_probs=256.8
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~ 173 (429)
+++|+|+.|++++++|+.+.+++.+.+.+ ....|+. .+..++|++++++++ .. ++++|++|+|+++++..+++
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~g----~~-~~~~i~~~~g~t~a~~~~~~ 103 (367)
T 3euc_A 30 HGLVKLDAMENPYRLPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVMQ----VP-AGMEVLLGNGSDEIISMLAL 103 (367)
T ss_dssp TTCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHHT----CC-TTCEEEEEEHHHHHHHHHHH
T ss_pred CCeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHhC----CC-CcceEEEcCCHHHHHHHHHH
Confidence 46899999999999999999999998864 4567854 688999999999973 22 66899999999999999999
Q ss_pred HhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-CCcEEEEcCCCCCccCCCCHHHHHH
Q 014172 174 AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDE 252 (429)
Q Consensus 174 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~p~NPtG~~~~~~~l~~ 252 (429)
+++++||+|+++.|+|.++...++..|++++.+++++ ++.+|++.+++++++ ++++|++++||||||.+++.+++++
T Consensus 104 ~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~ 181 (367)
T 3euc_A 104 AAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRA--DFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEA 181 (367)
T ss_dssp HTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHH
T ss_pred HHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCCHHHHHH
Confidence 9999999999999999999999999999999999864 567999999999988 8999999999999999999999999
Q ss_pred HHHHHHhCC-CeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcc
Q 014172 253 IARIVAKHP-RLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 331 (429)
Q Consensus 253 I~~~a~~~~-~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~ 331 (429)
|+++|++|+ |+++|+||+|.++.+.+ ... .+ ...++++++.||||. +++|+|+||+++++++++.+......
T Consensus 182 i~~~~~~~~~~~~li~De~~~~~~~~~--~~~--~~-~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~~~~~~~~~~~~~- 254 (367)
T 3euc_A 182 IVRAAQGSVCRSLVVVDEAYQPFAQES--WMS--RL-TDFGNLLVMRTVSKL-GLAGIRLGYVAGDPQWLEQLDKVRPP- 254 (367)
T ss_dssp HHHHTBTTSCBCEEEEECTTCCSSSCC--SGG--GG-GTCTTEEEEEECCCT-TSCSCCEEEEEECHHHHHHHGGGCCS-
T ss_pred HHHhhhhcCCCcEEEEeCcchhhcccc--hHH--HH-hhCCCEEEEecchhh-cccccCceeeeeCHHHHHHHHHhCCC-
Confidence 999999873 59999999999866332 111 12 235788999999999 88999999999999999888776543
Q ss_pred cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCC
Q 014172 332 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 411 (429)
Q Consensus 332 ~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~ 411 (429)
++++.++|.++..+|+. .+++++.+++++++++.+.+.|+++||+++. +.+++|+|++++
T Consensus 255 -~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~~~~-------------- 314 (367)
T 3euc_A 255 -YNVNVLTEATALFALEH----VAVLDEQAAQLRAERSRVAEGMAAHGGVTVF-PSAANFLLARVP-------------- 314 (367)
T ss_dssp -SCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHHHHHTSTTCEEC-CCSSSEEEEECS--------------
T ss_pred -CCCCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEECC--------------
Confidence 45899999999999985 6789999999999999999999999899865 556677899886
Q ss_pred ChHHHHHHHHHhCCeec
Q 014172 412 NSESLCRYLLDKAQVLL 428 (429)
Q Consensus 412 ~~~~~~~~Ll~~~gV~v 428 (429)
+..++.++|.+ +||.+
T Consensus 315 ~~~~l~~~l~~-~gi~v 330 (367)
T 3euc_A 315 DAAQTFDRLLA-RKVLI 330 (367)
T ss_dssp CHHHHHHHHHT-TTEEC
T ss_pred CHHHHHHHHHH-CCeEE
Confidence 46788888754 59976
No 73
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=7.8e-40 Score=321.95 Aligned_cols=299 Identities=22% Similarity=0.354 Sum_probs=254.3
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcC---CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHH
Q 014172 97 VIRLAAGEPDFDTPVLIAEAGINAIREG---FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (429)
Q Consensus 97 ~i~L~~g~~~~~~p~~v~~a~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~ 173 (429)
.|+|+.|++++++|+.+.+++.+.+.+. ..+|++..+ .++|+++++++.+.+|..+++++|++|+|+++++..+++
T Consensus 32 ~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~ 110 (369)
T 3cq5_A 32 DIRLNTNENPYPPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQ 110 (369)
T ss_dssp SEECSSCCCCSCCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHH
T ss_pred ceeccCCCCCCCCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHH
Confidence 3999999999989999999999988652 567866555 899999999999988887788999999999999999999
Q ss_pred HhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-CCcEEEEcCCCCCccCCCCHHHHHH
Q 014172 174 AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDE 252 (429)
Q Consensus 174 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~p~NPtG~~~~~~~l~~ 252 (429)
+++++||+|++++|+|+++...++..|++++.+|.+ +++.+|++.+++++++ ++++|++++|+||||.+++ +++
T Consensus 111 ~l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---~~~ 185 (369)
T 3cq5_A 111 AFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRG--ADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTS---LDD 185 (369)
T ss_dssp HHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECC--TTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCC---HHH
T ss_pred HhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEecCC--cCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCC---HHH
Confidence 999999999999999999999999999999999965 4467999999999987 8999999999999999999 555
Q ss_pred HHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCC-ceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcc
Q 014172 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE-RTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 331 (429)
Q Consensus 253 I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~-~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~ 331 (429)
+.++|+.+ ++++|+||+|.++.++ .+...+....+ +++++.||||.+|++|+|+||+++++++++.+......
T Consensus 186 l~~l~~~~-~~~li~De~~~~~~~~----~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~- 259 (369)
T 3cq5_A 186 VERIINVA-PGIVIVDEAYAEFSPS----PSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRLP- 259 (369)
T ss_dssp HHHHHHHC-SSEEEEECTTGGGCCS----CCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTHHHHHHHTTSCT-
T ss_pred HHHHHHhC-CCEEEEECCchhhcCC----cchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHHHHHHHHHcCCC-
Confidence 66666677 7999999999987653 23333323345 89999999999999999999999999999888776544
Q ss_pred cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCC
Q 014172 332 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 411 (429)
Q Consensus 332 ~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~ 411 (429)
++++.+.|.++.++|+. .+++++.+++++++++.+.+.|++. |+++.++ .++|+|++++ .
T Consensus 260 -~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~~~~~-~------------ 319 (369)
T 3cq5_A 260 -YHLSALSQAAAIVALRH----SADTLGTVEKLSVERVRVAARLEEL-GYAVVPS-ESNFVFFGDF-S------------ 319 (369)
T ss_dssp -TCSCHHHHHHHHHHHHT----HHHHHTHHHHHHHHHHHHHHHHHHH-TCEEECC-SSSEEEEECC-S------------
T ss_pred -CCCCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHhC-CCEECCC-CCeEEEEECC-C------------
Confidence 35889999999999985 5788899999999999999999886 8888754 4566888886 1
Q ss_pred ChHHHHHHHHHhCCeec
Q 014172 412 NSESLCRYLLDKAQVLL 428 (429)
Q Consensus 412 ~~~~~~~~Ll~~~gV~v 428 (429)
+..+++++|.+ +||.+
T Consensus 320 ~~~~l~~~l~~-~gi~v 335 (369)
T 3cq5_A 320 DQHAAWQAFLD-RGVLI 335 (369)
T ss_dssp SHHHHHHHHHH-TTEEC
T ss_pred CHHHHHHHHHH-CCEEE
Confidence 67889998865 59876
No 74
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=1.9e-41 Score=349.12 Aligned_cols=320 Identities=22% Similarity=0.314 Sum_probs=257.6
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCC-CCCCCHHHHHHHHHHHHhh-cC-CCCC-CCcEEEecChHHHHHHH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYT-PNAGTLELRSAICHKLKEE-NG-LSYT-PDQILVSNGAKQSILQA 171 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~-~~~G~~~lr~~ia~~l~~~-~g-~~~~-~~~i~~t~G~~~al~~~ 171 (429)
++|+|+.|.++++ |+.+++++.+.+.. ..|+ +..|..++|+++++++.+. ++ +.+. +++|++|+|+++++..+
T Consensus 104 ~~i~l~~g~~~~~-~~~~v~a~~~~~~~--~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~ 180 (533)
T 3f6t_A 104 DAVNYCHTELGLN-RDKVVAEWVNGAVA--NNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYA 180 (533)
T ss_dssp HHHHHHHHTTCCC-HHHHHHHHHHHHHT--CSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHH
T ss_pred hheeccCCCCCcC-CcHHHHHHHHHHHh--CCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHH
Confidence 3789999999986 66666666666654 3454 7889999999999999766 34 4555 47999999999999999
Q ss_pred HHH-----hcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCC--CCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCC
Q 014172 172 VLA-----VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRI--SENFLLDPKVLESKLTEKSRLLILCSPSNPTGSV 244 (429)
Q Consensus 172 l~~-----l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~ 244 (429)
+.+ ++++||+|+++.|+|.+|...++..|++++.++++. ++++.+|++.|++++++++++|++++||||||.+
T Consensus 181 ~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~NPtG~~ 260 (533)
T 3f6t_A 181 FHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKE 260 (533)
T ss_dssp HHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCTTTCBC
T ss_pred HHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCCCCCccc
Confidence 998 789999999999999999999999999999999875 5678899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHH-hCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHH----
Q 014172 245 YPKNLLDEIARIVA-KHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH---- 319 (429)
Q Consensus 245 ~~~~~l~~I~~~a~-~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~---- 319 (429)
++.+++++|+++|+ +| +++||+||+|.++.++. .++.... .+++++++||||.+|++|+|+||++++++
T Consensus 261 ~~~~~l~~l~~la~~~~-~~~li~De~y~~~~~~~---~~~~~~~--~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~ 334 (533)
T 3f6t_A 261 FDTNALNAIKQAVEKNP-KLMIISDEVYGAFVPNF---KSIYSVV--PYNTMLVYSYSKLFGCTGWRLGVIALNEKNVFD 334 (533)
T ss_dssp CCHHHHHHHHHHHHHCT-TCEEEEECTTGGGSTTC---CCHHHHS--GGGEEEEEESHHHHTCGGGCEEEEEEESSCHHH
T ss_pred cCHHHHHHHHHHHHhCC-CCEEEEcCCccccccCc---cCHhhcC--CCCEEEEecCcccCCCcccceEEEEECcHHHHH
Confidence 99999999999999 68 99999999999887642 2333332 47899999999999999999999999776
Q ss_pred -HHHHH--------------------------------HHHhhcccCCCchHHHHH----HHHHHhc----CCCChHHHH
Q 014172 320 -FVAAC--------------------------------NKIQSQFTSGASSISQKA----GVAALGL----GYAGGEVVS 358 (429)
Q Consensus 320 -~~~~l--------------------------------~~~~~~~~~~~~~~~q~a----a~~~l~~----~~~~~~~~~ 358 (429)
+++.+ .+.......+++.+.|.+ +..+|.. +. ..++++
T Consensus 335 ~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~-~~~~~~ 413 (533)
T 3f6t_A 335 DNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGS-DDPYID 413 (533)
T ss_dssp HHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGT-BCHHHH
T ss_pred HHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccc-hHHHHH
Confidence 33322 334445566788889988 4556641 11 367899
Q ss_pred HHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccC--C----CCCCChHHHHHHHHHhCCeec
Q 014172 359 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEG--F----GKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 359 ~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~--~----~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++++.|+++++.+.+.|. + ++.+..|+++||+|++++...... .+ + ....++.+++.+|++++||.+
T Consensus 414 ~~~~~~~~r~~~l~~~L~-~-~~~~~~~~~g~~~~~~l~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v 486 (533)
T 3f6t_A 414 IARKLVSERYDQLHDAMQ-A-PKDETDTNTHYYSLIDIYRLAEKI-YGKEFRDYLTNNFEQVDFLLKLAEKNGVVL 486 (533)
T ss_dssp HHHHHHHHHHHHHHHHHT-C-CCCCSTTBCCSEEEEEHHHHHHHH-HCHHHHHHHHHHCCHHHHHHHHHHHTTSSS
T ss_pred HHHHHHHHHHHHHHHhcC-C-CccccCCCceEEEEEehHhhhhhc-cchHHHHHhhccCCHHHHHHHHHHhCCEEE
Confidence 999999999999999998 6 788888999999999997410000 00 0 000157789999998889986
No 75
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=5.2e-41 Score=346.24 Aligned_cols=345 Identities=20% Similarity=0.301 Sum_probs=259.3
Q ss_pred ccccccCC--chhHHHHHHHHHHHh-cCC----CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Q 014172 70 PRVNAVKP--SKTVAITDQATALAQ-AGV----SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAIC 142 (429)
Q Consensus 70 ~~~~~~~~--~~~~~~~~~~~~~~~-~g~----~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia 142 (429)
.++..+++ +.+..+.+....... +|. .+|+|+.|+++++ ++.+.+++.+.+.. .+|++..|..++|++++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~l~~g~~~~~-~~~~~~al~~~~~~--~~Y~~~~g~~~lr~~ia 148 (546)
T 2zy4_A 72 VGVGGLAKIDGIEGRFERYIAENRDQEGVRFLGKSLSYVRDQLGLD-PAAFLHEMVDGILG--CNYPVPPRMLNISEKIV 148 (546)
T ss_dssp SCEEECCCSTTHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTSCCC-HHHHHHHHHHHHHT--CSCCSSSSCCHHHHHHH
T ss_pred hhhccCCccccchhHHHHHHHhcCCCCcchhHHhhhecccCCCCCC-ChHHHHHHHHhhhc--CCCCCCcCCHHHHHHHH
Confidence 34555655 555555554443321 111 2799999999874 56677777776643 68988889999999988
Q ss_pred HHH-HhhcCCCC---CCCcEEEecChHHHHHHHHHH-----hcCCCCEEEEcCCCCCChHHHHHHc--CCEEEEecCCCC
Q 014172 143 HKL-KEENGLSY---TPDQILVSNGAKQSILQAVLA-----VCSPGDEVIIPAPFWVSYPEMARIA--DATPVILPTRIS 211 (429)
Q Consensus 143 ~~l-~~~~g~~~---~~~~i~~t~G~~~al~~~l~~-----l~~~gd~Vlv~~p~y~~~~~~~~~~--g~~~~~v~~~~~ 211 (429)
+++ .+.++... ++++|++|+|+++++..++++ ++++||+|++++|+|+.|...+... |++++.++++++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~ 228 (546)
T 2zy4_A 149 RQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPS 228 (546)
T ss_dssp HHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGG
T ss_pred HHHHHHhccCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcc
Confidence 765 44444322 468999999999999999988 5789999999999999999886654 689999999887
Q ss_pred CCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHH--HhCCCeEEEEccCCcccccCCCCCCccccCCC
Q 014172 212 ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIV--AKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 289 (429)
Q Consensus 212 ~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a--~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~ 289 (429)
++|.+|++.|++.+++++++|++++||||||.+++.+++++|+++| ++| |++||+||+|.++.++ ..++....
T Consensus 229 ~~~~~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~-~~~ii~De~y~~~~~~---~~s~~~~~- 303 (546)
T 2zy4_A 229 LNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRP-DLMILTDDVYGTFADD---FQSLFAIC- 303 (546)
T ss_dssp GTTBCCHHHHGGGGSTTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCT-TCEEEEECTTGGGSTT---CCCHHHHC-
T ss_pred cCCCCCHHHHHHhhCCCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccC-CcEEEEeCcchhhccc---CcCHHHhC-
Confidence 7899999999998888899999999999999999999999999999 788 9999999999998753 33444432
Q ss_pred CCCceEEEeccChhcccccceeeEEEcCHH-HHHHHHHH-------------h-----------------------hccc
Q 014172 290 MWERTLTVNGFSKAFAMTGWRLGYIAGPKH-FVAACNKI-------------Q-----------------------SQFT 332 (429)
Q Consensus 290 ~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~-~~~~l~~~-------------~-----------------------~~~~ 332 (429)
.+++|+++||||.+|++|+|+||++++++ +++.+.+. . ....
T Consensus 304 -~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 382 (546)
T 2zy4_A 304 -PENTLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHT 382 (546)
T ss_dssp -GGGEEEEEESTTTTTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGG
T ss_pred -CCCEEEEEeCccccCCCCcceEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhcc
Confidence 37899999999999999999999999875 77766321 1 1223
Q ss_pred CCCchHHHHHH-----HHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCC-cccC
Q 014172 333 SGASSISQKAG-----VAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGS-EAEG 406 (429)
Q Consensus 333 ~~~~~~~q~aa-----~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~-~~~~ 406 (429)
.+.+.+.|.++ .++++. .+.+++++++.|+++++.+.+.|. + ++.+.+|+++||+|++++..... ...+
T Consensus 383 ~~~s~~~Q~a~a~~a~~all~~---~~~~~~~~r~~~~~r~~~l~~~L~-~-~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 457 (546)
T 2zy4_A 383 AGLSTPQQVQMALFSLFALMDE---ADEYKHTLKQLIRRRETTLYRELG-M-PPLRDENAVDYYTLIDLQDVTAKLYGEA 457 (546)
T ss_dssp CSSCHHHHHHHHHHHHHHHHCT---TCHHHHHHHHHHHHHHHHHHGGGT-S-SCCCCTTBCCSEEEEEHHHHHHHHHCHH
T ss_pred CCCCcHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcC-C-CcccCCCCeeEEEEEEHHHhhcccccHH
Confidence 46788888764 234444 367899999999999999999996 5 56667889999999998631000 0000
Q ss_pred C----CCCCChHHHHHHHHHhCCeec
Q 014172 407 F----GKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 407 ~----~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+ ....++.+++.++++++||.|
T Consensus 458 ~~~wl~~~~~~~~~l~~ll~~~gV~v 483 (546)
T 2zy4_A 458 FSEWAVKQSSTGDMLFRIADETGIVL 483 (546)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHSCCC
T ss_pred HHHHhhccCCHHHHHHHHHHHCCEEE
Confidence 0 000134566667777779876
No 76
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=2.6e-39 Score=317.02 Aligned_cols=312 Identities=20% Similarity=0.337 Sum_probs=256.3
Q ss_pred cCcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcC---CCCCCCCCCCHHHHHHHHH
Q 014172 67 SLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREG---FTRYTPNAGTLELRSAICH 143 (429)
Q Consensus 67 ~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~---~~~Y~~~~G~~~lr~~ia~ 143 (429)
.+++.++.++++..... ...|+++|+|+.|+|++++|+.+.+++.+.+.++ ...|+ ..+..+||+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~-------~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~-~~~~~~lr~~la~ 76 (360)
T 3hdo_A 5 PLRQNIASMKGYIPGYQ-------PPDIASWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYP-SASSQKLREVAGE 76 (360)
T ss_dssp CCCHHHHHCCCCCCCCC-------CSCCTTSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCC-CSSCHHHHHHHHH
T ss_pred hhHHHHHhcCCcCCCCC-------CccccceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCC-CCchHHHHHHHHH
Confidence 45666667766643210 0235679999999999999999999999998765 56774 4577999999999
Q ss_pred HHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHh
Q 014172 144 KLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLES 223 (429)
Q Consensus 144 ~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~ 223 (429)
+++ +++++|++|+|+++++..++++++++||+|+++.|+|.++...++..|++++.++++. ++.+ +++++
T Consensus 77 ~~g------~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~--~~l~~ 146 (360)
T 3hdo_A 77 LYG------FDPSWIIMANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTG--DFRI--AGFPE 146 (360)
T ss_dssp HHT------CCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCT--TSSB--TTCCS
T ss_pred HhC------cCcceEEEcCCHHHHHHHHHHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCC--CCCH--HHHHh
Confidence 983 5788999999999999999999999999999999999999999999999999999853 3444 55544
Q ss_pred hcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChh
Q 014172 224 KLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKA 303 (429)
Q Consensus 224 ~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 303 (429)
.+ +++++++++|+||||.+++ +++|.++|+++ |+++|+||+|.++. +.....+ ....++++++.||||.
T Consensus 147 ~~--~~~~v~i~~p~nptG~~~~---~~~l~~l~~~~-~~~li~De~~~~~~--~~~~~~~---~~~~~~~i~~~s~sK~ 215 (360)
T 3hdo_A 147 RY--EGKVFFLTTPNAPLGPSFP---LEYIDELARRC-AGMLVLDETYAEFA--ESNALEL---VRRHENVVVTRTLSKS 215 (360)
T ss_dssp SB--CSSEEEEESSCTTTCCCCC---HHHHHHHHHHB-SSEEEEECTTGGGS--SCCCTHH---HHHCSSEEEEEESTTT
T ss_pred hc--CCCEEEEeCCCCCCCCCcC---HHHHHHHHHHC-CCEEEEECChHhhC--CcchhHH---hccCCCEEEEecchHh
Confidence 43 4679999999999999999 66677788999 99999999999863 3222222 2235889999999999
Q ss_pred cccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCcee
Q 014172 304 FAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM 383 (429)
Q Consensus 304 ~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~ 383 (429)
+|++|+|+||+++++++++.+...... ++++.++|.++.++|+. .+++++.+++++++++.+.+.|+++ |+.+
T Consensus 216 ~g~~G~r~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~ 288 (360)
T 3hdo_A 216 YSLAGMRIGLAIARPEVIAALDKIRDH--YNLDRLAQAACVAALRD----QAYLSECCRRIRETREWFTTELRSI-GYDV 288 (360)
T ss_dssp TSCTTSCCEEEECCHHHHHHHHHHSCS--CCSCHHHHHHHHHHHHC----HHHHHHHHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred hcCCccceeeEeeCHHHHHHHHHhCCC--CCCCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHHC-CCEE
Confidence 999999999999999999999887654 46899999999999985 6789999999999999999999998 8888
Q ss_pred ecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 384 SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 384 ~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.++.+ .|+|+.++.. +..+++++|.++ ||.+
T Consensus 289 ~~~~~-~~~~~~~~~~------------~~~~l~~~l~~~-gi~v 319 (360)
T 3hdo_A 289 IPSQG-NYLFATPPDR------------DGKRVYDGLYAR-KVLV 319 (360)
T ss_dssp CCCSS-SEEEEECTTC------------CHHHHHHHHHHT-TEEC
T ss_pred cCCCc-cEEEEECCCC------------CHHHHHHHHHHC-CEEE
Confidence 75555 5588888742 688999888765 9986
No 77
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=1e-38 Score=309.40 Aligned_cols=289 Identities=20% Similarity=0.296 Sum_probs=237.4
Q ss_pred hcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHH
Q 014172 92 QAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 171 (429)
Q Consensus 92 ~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~ 171 (429)
...+++|+|+.|++++++|+.+.+++.+.+.. ..+| +..|..+||+++++++. +++++|++|+|+++++.++
T Consensus 13 ~~~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~-~~~y-~~~~~~~lr~~la~~~~------~~~~~i~~t~G~~~~l~~~ 84 (337)
T 3p1t_A 13 RAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR-INRY-PFDAEPRVMRKLAEHFS------CPEDNLMLVRGIDECFDRI 84 (337)
T ss_dssp -CCCCCEECSSCCCCSCCCHHHHHHHHHHGGG-TTSC-CTTHHHHHHHHHHHHHT------SCGGGEEEESHHHHHHHHH
T ss_pred cCCCCceEeeCCCCCCCCCHHHHHHHHHhhhh-hccC-CCCchHHHHHHHHHHhC------cCHHHEEEeCCHHHHHHHH
Confidence 34567999999999999999999999987654 5678 56789999999999974 5678999999999999999
Q ss_pred HHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHH
Q 014172 172 VLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLD 251 (429)
Q Consensus 172 l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~ 251 (429)
+.++ +||+|++++|+|.++...++..|++++.++++. ++.+|++.++++ .+++++++++||||||.+++ ++
T Consensus 85 ~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~~---~~ 155 (337)
T 3p1t_A 85 SAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTD--DLLLDPNDLAQV--SRDDCVVLANPSNPTGQALS---AG 155 (337)
T ss_dssp HHHS--TTSEEEEESSSCSHHHHHHTTSCCEEEEECBCT--TSSBCHHHHTTC--CTTEEEEEESSCTTTCCCCC---HH
T ss_pred HHhc--CCCeEEEeCCCcHHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHhh--cCCCEEEEeCCCCCCCCCCC---HH
Confidence 8887 999999999999999999999999999999863 567999999987 46889999999999999999 55
Q ss_pred HHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcc
Q 014172 252 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 331 (429)
Q Consensus 252 ~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~ 331 (429)
+|.++|+++ +++ |+||+|.++.+.+. .. ....+++++++||||.+|++|+|+||+++++++++.+.+...
T Consensus 156 ~l~~l~~~~-~~~-ivDea~~~~~~~~~--~~----~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~-- 225 (337)
T 3p1t_A 156 ELDQLRQRA-GKL-LIDETYVDYSSFRA--RG----LAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQW-- 225 (337)
T ss_dssp HHHHHHHHC-SEE-EEECTTGGGSSCSS--SC----CCCBTTEEEEEESSSTTCCTTTCCEEEECCHHHHHHHHTTSC--
T ss_pred HHHHHHHhC-CcE-EEECCChhhccccc--cc----cccCCCEEEEeeCchhccCcchheEEEEeCHHHHHHHHhhcC--
Confidence 666777888 874 55999998654332 11 122578899999999999999999999999999998877543
Q ss_pred cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCC
Q 014172 332 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 411 (429)
Q Consensus 332 ~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~ 411 (429)
..+++.+.|.++..+|+. .+++.+.++++.++|+.+.+.|+++ |+++.+++++| +|+..+
T Consensus 226 ~~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-~~~~~~-------------- 285 (337)
T 3p1t_A 226 FCNVGTLDLHALEAALDN----DRAREAHIAKTLAQRRRVADALRGL-GYRVASSEANF-VLVENA-------------- 285 (337)
T ss_dssp TTCSCHHHHHHHHHHHTC----HHHHHHHHHHHHHHHHHHHHHHHHT-TCCBCCCSSSE-EEEECT--------------
T ss_pred CCCCCHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHHHHC-cCEECCCCCeE-EEEEcC--------------
Confidence 346788999999988885 4566677778888899999999998 88888777776 566654
Q ss_pred ChHHHHHHHHHhCCeec
Q 014172 412 NSESLCRYLLDKAQVLL 428 (429)
Q Consensus 412 ~~~~~~~~Ll~~~gV~v 428 (429)
+..++.+.| +++||.+
T Consensus 286 ~~~~~~~~l-~~~gi~v 301 (337)
T 3p1t_A 286 AGERTLRFL-RERGIQV 301 (337)
T ss_dssp TTHHHHHHH-HHTTEEC
T ss_pred CHHHHHHHH-HHCCeEE
Confidence 344666655 4559976
No 78
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=2.6e-39 Score=315.66 Aligned_cols=291 Identities=16% Similarity=0.277 Sum_probs=238.0
Q ss_pred cCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHH
Q 014172 93 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 172 (429)
Q Consensus 93 ~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l 172 (429)
.|+++|+|+.|++++++|+++.+++.+.+ .....|++..+ .+||+++++++. +++++|++|+|+++++.+++
T Consensus 13 ~g~~~id~~~~~~~~~~~~~v~~a~~~~~-~~~~~y~~~~~-~~lr~~la~~~~------~~~~~i~~t~g~~~al~~~~ 84 (350)
T 3fkd_A 13 LSSEIVNFSTTVWTDGDKDHLEKHLVENL-NCIRHYPEPDA-GTLRQMLAKRNS------VDNNAILVTNGPTAAFYQIA 84 (350)
T ss_dssp ---CCEECSCCSCCCSCCHHHHHHHHHTG-GGGGSCCCTTC-HHHHHHHHHHTT------CCGGGEEEESHHHHHHHHHH
T ss_pred ccccEEEccCCCCCCCCCHHHHHHHHHhH-hHHhcCCCCcH-HHHHHHHHHHhC------cCHHHEEEcCCHHHHHHHHH
Confidence 35689999999999999999999999887 44567866665 899999999873 57789999999999999999
Q ss_pred HHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecC-CCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHH
Q 014172 173 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPT-RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLD 251 (429)
Q Consensus 173 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~ 251 (429)
++++ ||+|+++.|+|..+...++..|++++.+++ +.+++ +++ +++++|++++||||||.+++.++++
T Consensus 85 ~~l~--gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~~--------~~~~~v~i~~p~nptG~~~~~~~l~ 152 (350)
T 3fkd_A 85 QAFR--GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGE--ADF--------SNMDFCWLCNPNNPDGRLLQRTEIL 152 (350)
T ss_dssp HHTT--TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGG--SCC--------TTCSEEEEESSCTTTCCCCCHHHHH
T ss_pred HHHC--CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCcccc--Ccc--------CCCCEEEEeCCCCCcCCCCCHHHHH
Confidence 9988 999999999999999999999999999998 54343 333 5789999999999999999988888
Q ss_pred HHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcc
Q 014172 252 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 331 (429)
Q Consensus 252 ~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~ 331 (429)
+|++.|++ .+||+||+|.++.+.+... ...+. ..+++++++||||.+|++|+|+||+++++++++.+......
T Consensus 153 ~l~~~~~~---~~li~Dea~~~~~~~~~~~--~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~- 225 (350)
T 3fkd_A 153 RLLNDHPD---TTFVLDQSYVSFTTEEVIR--PADIK-GRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFSTP- 225 (350)
T ss_dssp HHHHHCTT---SEEEEECTTTTSCSSCCCC--GGGGT-TCSSEEEEEESHHHHSCGGGCCEEEECCHHHHHHHHTTCCT-
T ss_pred HHHHhCCC---CEEEEECchhhhccCcchh--hHHhh-cCCCEEEEecCchhccCcchheEeEEeCHHHHHHHHHhCCC-
Confidence 77777754 4999999999987765322 22222 36889999999999999999999999999999998876643
Q ss_pred cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCC
Q 014172 332 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 411 (429)
Q Consensus 332 ~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~ 411 (429)
.+++.++|.++.++|+.. ..+.++.++.+ ++++.+.+.|+++||+++.++. ++|+|++++..
T Consensus 226 -~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~-~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~------------ 287 (350)
T 3fkd_A 226 -WAVNALAIEAAKFILIHP---AQFTLPIRKWQ-RNTVDFITALNRLDGVEVHPSG-TTFFLLRLKKG------------ 287 (350)
T ss_dssp -TCSCHHHHHHHHHHHHCT---TTTCCCHHHHH-HHHHHHHHHHHHSTTEEECCCS-SSEEEEEESSS------------
T ss_pred -CCCCHHHHHHHHHHHhCH---HHHHHHHHHHH-HHHHHHHHHHhcCCCcEECCCC-CcEEEEECCCC------------
Confidence 468999999999999863 33444444444 8899999999988899887555 45678988752
Q ss_pred ChHHHHHHHHHhCCeec
Q 014172 412 NSESLCRYLLDKAQVLL 428 (429)
Q Consensus 412 ~~~~~~~~Ll~~~gV~v 428 (429)
+..+++++|++++||.+
T Consensus 288 ~~~~l~~~L~~~~gi~v 304 (350)
T 3fkd_A 288 TAAELKKYMLEEYNMLI 304 (350)
T ss_dssp CHHHHHHHHHHTTCEEC
T ss_pred CHHHHHHHHHHHCCEEE
Confidence 68899999998669986
No 79
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=100.00 E-value=3.5e-40 Score=327.26 Aligned_cols=295 Identities=18% Similarity=0.176 Sum_probs=235.0
Q ss_pred cCCCeEEcCCCCCCCCChHHHHHHHHHHH--Hc--CCCCCCCCCCC-----HHHHHHHHHHHHhhcCCCCCC-CcEEEec
Q 014172 93 AGVSVIRLAAGEPDFDTPVLIAEAGINAI--RE--GFTRYTPNAGT-----LELRSAICHKLKEENGLSYTP-DQILVSN 162 (429)
Q Consensus 93 ~g~~~i~L~~g~~~~~~p~~v~~a~~~~~--~~--~~~~Y~~~~G~-----~~lr~~ia~~l~~~~g~~~~~-~~i~~t~ 162 (429)
.++++|+|+.|.|++++|+.+.+++.+.. .. +..+|++..|. ++||++||++++ .+|+.+.+ ++|++|+
T Consensus 20 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~i~~t~ 98 (391)
T 3bwn_A 20 MSDFVVNLDHGDPTAYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRYIVVGT 98 (391)
T ss_dssp TTTSCEECSSCCCGGGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSEEEEEE
T ss_pred CCCCeeEcCCCCCCCCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEeC
Confidence 45679999999999877777777653322 11 35679999998 999999999998 67888777 5999999
Q ss_pred ChHHHHHHHHHHhcCCCC----EEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCC
Q 014172 163 GAKQSILQAVLAVCSPGD----EVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPS 238 (429)
Q Consensus 163 G~~~al~~~l~~l~~~gd----~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~ 238 (429)
|+++++.+++++++++|| +|++++|+|..|...++..|++++.++++.+ + +. .+++++|++++||
T Consensus 99 G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~--l~--------~~~~k~v~l~~p~ 167 (391)
T 3bwn_A 99 GSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAW-G--FD--------KKGPYIELVTSPN 167 (391)
T ss_dssp HHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEEST-T--CC--------CCSCEEEEEESSC
T ss_pred ChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCHH-H--cC--------CCCCEEEEECCCC
Confidence 999999999999999999 9999999999999999999999998887542 2 22 2578999999999
Q ss_pred CCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEc-C
Q 014172 239 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG-P 317 (429)
Q Consensus 239 NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~-~ 317 (429)
||||.+++ +|++.++.+ +++||+||+|.+ + ...++.. ..+++|+++||||.||++|+|+||+++ +
T Consensus 168 NPtG~~~~-----~l~~~~~~~-~~~ii~De~y~~----~-~~~~l~~---~~~~~i~~~S~SK~~g~~GlRiG~~~~~~ 233 (391)
T 3bwn_A 168 NPDGTIRE-----TVVNRPDDD-EAKVIHDFAYYW----P-HYTPITR---RQDHDIMLFTFSKITGHAGSRIGWALVKD 233 (391)
T ss_dssp TTTCCCCC-----CCC-----C-CCEEEEECTTCS----T-TTSCCCC---CBCCSEEEEEHHHHHSCGGGCEEEEEECC
T ss_pred CCCchhHH-----HHHHHhhcC-CCEEEEeCCCCC----C-CCCcccc---CCCCeEEEEechhhcCCCccceEEEEecC
Confidence 99999997 344422222 399999999973 2 1222222 358899999999999999999999997 8
Q ss_pred HHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCC-------ChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC----
Q 014172 318 KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYA-------GGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP---- 386 (429)
Q Consensus 318 ~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~-------~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p---- 386 (429)
+++++.+.........+++.++|.++..+|+.+.. .+++++++++.|+++|+.+.+.|++++|+++..|
T Consensus 234 ~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~ 313 (391)
T 3bwn_A 234 KEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAF 313 (391)
T ss_dssp HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEE
T ss_pred HHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccc
Confidence 99999998887766678999999999999986210 1467899999999999999999999877777544
Q ss_pred ---------CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 387 ---------QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 387 ---------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++|+|+|++++. . +++.++++++||.+
T Consensus 314 ~~f~~~~~~~~g~~~~~~~~~--------------~-~~~~~~l~~~gV~v 349 (391)
T 3bwn_A 314 CNYFGKSLESYPAFAWLGTKE--------------E-TDLVSELRRHKVMS 349 (391)
T ss_dssp ETTTTEEECCCCSEEEEEESS--------------S-CCHHHHHHHTTEEC
T ss_pred cccccccCCCcceEEEecCCc--------------H-HHHHHHHHHCCEEE
Confidence 455689999973 1 24455667779986
No 80
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=100.00 E-value=2.6e-38 Score=306.93 Aligned_cols=287 Identities=22% Similarity=0.363 Sum_probs=237.7
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIR-EGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~-~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 174 (429)
+.|+|+.|.+++++|+.+.+++.+.+. .+...|+ ..+..++|+++++++.+. .+++++|++|+|+++++..++++
T Consensus 20 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~~~~lr~~la~~~~~~---~~~~~~v~~~~G~~~al~~~~~~ 95 (335)
T 1uu1_A 20 DKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYY-DSPDEELIEKILSYLDTD---FLSKNNVSVGNGADEIIYVMMLM 95 (335)
T ss_dssp CSEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCC-CSSCHHHHHHHHHHHTCS---SCCGGGEEEESSHHHHHHHHHHH
T ss_pred cceECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCC-CCchHHHHHHHHHHcCCC---CCCHHHEEEcCChHHHHHHHHHH
Confidence 579999999988889999999998772 3345674 457999999999998643 35678999999999999999998
Q ss_pred hcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHH
Q 014172 175 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 254 (429)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~ 254 (429)
+ ||+|+++ |+|.++...++..|++++.+|++ +++.+|++++ +++++|++++||||||.+++.+++++|+
T Consensus 96 ~---gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l-----~~~~~v~l~~p~nptG~~~~~~~l~~l~ 164 (335)
T 1uu1_A 96 F---DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLT--KDLRIPEVNV-----GEGDVVFIPNPNNPTGHVFEREEIERIL 164 (335)
T ss_dssp S---SEEEECS-SSCHHHHHHHHHHTCEEEECCCC--TTSCCCCCCC-----CTTEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred h---CCcEEEC-CCcHHHHHHHHHcCCeEEEeccC--CCCCCCHHHc-----CCCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 8 8999999 99999999999999999999985 3466888776 5789999999999999999966666555
Q ss_pred HHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCC
Q 014172 255 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG 334 (429)
Q Consensus 255 ~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~ 334 (429)
++ . | ++|+||+|.++.+. ++..+....+++++++||||.+|++|+|+||+++++++++.+...... ++
T Consensus 165 ~~---~-~-~li~De~~~~~~~~-----~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~--~~ 232 (335)
T 1uu1_A 165 KT---G-A-FVALDEAYYEFHGE-----SYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLP--FN 232 (335)
T ss_dssp HT---T-C-EEEEECTTHHHHCC-----CCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHSCT--TC
T ss_pred Hh---C-C-EEEEECcchhhcch-----hHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeCHHHHHHHHHhcCC--CC
Confidence 54 4 7 89999999986542 222222235789999999999999999999999999999988876544 46
Q ss_pred CchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChH
Q 014172 335 ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSE 414 (429)
Q Consensus 335 ~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 414 (429)
++.++|.++.++|+. .+++++.+++++++++++.+.|+++ |+++. |.+++|+|++++.. +..
T Consensus 233 ~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~------------~~~ 294 (335)
T 1uu1_A 233 VSYVSQMFAKVALDH----REIFEERTKFIVEERERMKSALREM-GYRIT-DSRGNFVFVFMEKE------------EKE 294 (335)
T ss_dssp SCHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCCSSEEEEECCTH------------HHH
T ss_pred cCHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHHHHC-CcEEc-CCCCeEEEEECCCC------------CHH
Confidence 899999999999985 5688899999999999999999988 77765 55667899998742 567
Q ss_pred HHHHHHHHhCCeec
Q 014172 415 SLCRYLLDKAQVLL 428 (429)
Q Consensus 415 ~~~~~Ll~~~gV~v 428 (429)
+++++|+++ ||.+
T Consensus 295 ~~~~~l~~~-gi~v 307 (335)
T 1uu1_A 295 RLLEHLRTK-NVAV 307 (335)
T ss_dssp HHHHHHHHH-TEEE
T ss_pred HHHHHHHHC-CEEE
Confidence 899998875 9876
No 81
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=100.00 E-value=2.7e-39 Score=324.48 Aligned_cols=294 Identities=16% Similarity=0.179 Sum_probs=244.6
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHH-cCCCC--CCCCC-C---CHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIR-EGFTR--YTPNA-G---TLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~-~~~~~--Y~~~~-G---~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~a 167 (429)
..+|+|+.|+|++++|+.+.+++.+++. .+... |++.. | ..+||++|++++++.++..+++++|++|+|++++
T Consensus 56 ~~~i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~a 135 (427)
T 2hox_A 56 GCSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQL 135 (427)
T ss_dssp TCCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHH
T ss_pred CceEEecCcCCCCCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHHH
Confidence 3589999999998888888888887763 33334 98887 8 9999999999999877777789999999999999
Q ss_pred HHHHHHHh--------cCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCC
Q 014172 168 ILQAVLAV--------CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSN 239 (429)
Q Consensus 168 l~~~l~~l--------~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~N 239 (429)
+.+++.++ +++||.|+++.|+|+.|...++..|++++.+ .+|++.|++++++++|+|++++|||
T Consensus 136 l~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~~~~~k~v~l~~p~N 207 (427)
T 2hox_A 136 IHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVW--------AGNAANYVNVSNPEQYIEMVTSPNN 207 (427)
T ss_dssp HHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEE--------EEEGGGGTTCSCGGGEEEEEESSCT
T ss_pred HHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeeee--------cCCHHHHHHhhcCCceEEEEcCCCC
Confidence 99999999 9999999999999999999999999987643 3688899998888899999999999
Q ss_pred CccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEc-CH
Q 014172 240 PTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG-PK 318 (429)
Q Consensus 240 PtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~-~~ 318 (429)
|||.+++ +. + + ++.+|.|+.|. + .+.++..+. .+++|+++||||.+|++|+|+||+++ ++
T Consensus 208 PtG~~~~-~~-------l--~-~~~~i~d~~~~----~--~~~s~~~~~--~~~~i~~~S~SK~~g~~G~RiG~~~~~~~ 268 (427)
T 2hox_A 208 PEGLLRH-AV-------I--K-GCKSIYDMVYY----W--PHYTPIKYK--ADEDILLFTMSKFTGHSGSRFGWALIKDE 268 (427)
T ss_dssp TTCCCCC-CS-------S--T-TCEEEEECTTC----S--TTTSCCCSC--BCCSEEEEEHHHHTSCGGGCCEEEEECCH
T ss_pred CcccccH-HH-------H--c-CCCEEEeeccc----C--CCCCccccC--CCceEEEEeChhcCCCCCceEEEEEECCH
Confidence 9999999 52 2 2 45677787764 2 233444443 57899999999999999999999999 58
Q ss_pred HHHHHHHHHhhcccCCCchHHHHHHHHHHhcCC--------CChHHHHHHHHHHHHHHHHHHHHhccCCCcee-------
Q 014172 319 HFVAACNKIQSQFTSGASSISQKAGVAALGLGY--------AGGEVVSKMVKAFRERRDFLVKSFGELEGVKM------- 383 (429)
Q Consensus 319 ~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~--------~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~------- 383 (429)
++++.+.+.......+++.+.|.++..+|..+. ..++++++.++.|+++++++.+.|++++|+.+
T Consensus 269 ~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 348 (427)
T 2hox_A 269 SVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSE 348 (427)
T ss_dssp HHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCE
T ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCcccccccccc
Confidence 999999988877777899999999999987521 01456778899999999999999998766554
Q ss_pred -------ecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 384 -------SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 384 -------~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
..|++++|+|++++. +..+++++|++++||.|
T Consensus 349 ~~~~~~~~~p~~g~f~~~~~~~-------------~~~~~~~~ll~~~gI~v 387 (427)
T 2hox_A 349 YCNYFRRMRPPSPSYAWVKCEW-------------EEDKDCYQTFQNGRINT 387 (427)
T ss_dssp EETTTTEEECCCCSEEEEEECS-------------GGGCSHHHHHHHTTEEC
T ss_pred ccccccccCCCCceEEEEECCC-------------cHHHHHHHHHHHCCEEE
Confidence 357789999999973 35678899987789986
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=2.6e-36 Score=299.58 Aligned_cols=299 Identities=17% Similarity=0.198 Sum_probs=245.1
Q ss_pred cCCCeEEcCCCCC-CCCChHHHHHHHHHHHHcC---CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 93 AGVSVIRLAAGEP-DFDTPVLIAEAGINAIREG---FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 93 ~g~~~i~L~~g~~-~~~~p~~v~~a~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
.|+++|+|+.|++ ++++|+.+.+++.+.+... ...|.+..|..++++++++++.+.+|. +++++|+|+++++
T Consensus 41 ~g~~~idl~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~v~~~~ggt~a~ 116 (398)
T 3a2b_A 41 DGRRVLMFGSNSYLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGK----EAAILFSTGFQSN 116 (398)
T ss_dssp TTEEEEECSCSCTTCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC----SEEEEESSHHHHH
T ss_pred CCceEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC----CcEEEECCHHHHH
Confidence 3567899999998 6667899999999887652 234556678889999999999988873 5899999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc----CCcEEEEcCCCCCccCC
Q 014172 169 LQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE----KSRLLILCSPSNPTGSV 244 (429)
Q Consensus 169 ~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~----~~~~i~l~~p~NPtG~~ 244 (429)
..++++++++||.|+++.|+|..+...++..|++++.+|. +|++++++.+++ ++++|++++|+||||.+
T Consensus 117 ~~~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~ 189 (398)
T 3a2b_A 117 LGPLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGH-------NNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDI 189 (398)
T ss_dssp HHHHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCB
T ss_pred HHHHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCC-------CCHHHHHHHHHhhccCCceEEEEeCCCCCCCCc
Confidence 9999999999999999999999999999999999999986 489999999876 78999999999999999
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCc-eEEEeccChhcccccceeeEEEcCHHHHHH
Q 014172 245 YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER-TLTVNGFSKAFAMTGWRLGYIAGPKHFVAA 323 (429)
Q Consensus 245 ~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~-~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~ 323 (429)
++ +++|.++|++| |+++|+||+|..+.|+.. ..++....+..++ +++++||||.++++| ||+++++++++.
T Consensus 190 ~~---~~~l~~~~~~~-~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~~~~~~~ 261 (398)
T 3a2b_A 190 VN---LPELTSIANEF-DAAVMVDDAHSLGVIGHK-GAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGDADVIDF 261 (398)
T ss_dssp CC---HHHHHHHHHHH-TCEEEEECTTTTTTSSGG-GCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEECHHHHHH
T ss_pred cC---HHHHHHHHHHc-CcEEEEECCCcccccCCC-CCchHhhcCCCcCCeEEEecccccccCCC---cEEEeCHHHHHH
Confidence 99 89999999999 999999999998776422 1223222122345 699999999999778 999999999998
Q ss_pred HHHH-hhcccCCCchHHHH-HHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccC
Q 014172 324 CNKI-QSQFTSGASSISQK-AGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG 401 (429)
Q Consensus 324 l~~~-~~~~~~~~~~~~q~-aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~ 401 (429)
+... ......+.+.+.|. ++.++|+. .++++++++.++++++++.+.|+++ |+++.+|. ++|+|+.++..
T Consensus 262 l~~~~~~~~~~~~~~~~~~a~~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-g~~~~~~~~~~-- 333 (398)
T 3a2b_A 262 LKHNARSVMFSASMTPASVASTLKALEI----IQNEPEHIEKLWKNTDYAKAQLLDH-GFDLGATE-SPILPIFIRSN-- 333 (398)
T ss_dssp HHHHCHHHHSSBCCCHHHHHHHHHHHHH----HHHCTHHHHHHHHHHHHHHHHHHHT-TCCBCSCC-SSEEEEECCCH--
T ss_pred HHHhcccceecCCCCHHHHHHHHHHHHH----HhhCHHHHHHHHHHHHHHHHHHHhc-CCCcCCCC-CCEEEEEcCCH--
Confidence 8775 33344445666776 45677775 3456788999999999999999998 88887776 46799998742
Q ss_pred CcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 402 SEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+..+++++|+++ ||.+
T Consensus 334 ---------~~~~~l~~~l~~~-gi~v 350 (398)
T 3a2b_A 334 ---------EKTFWVTKMLQDD-GVFV 350 (398)
T ss_dssp ---------HHHHHHHHHHHHT-TEEC
T ss_pred ---------HHHHHHHHHHHHC-CcEE
Confidence 2577899999888 9976
No 83
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=100.00 E-value=8.6e-34 Score=282.75 Aligned_cols=296 Identities=17% Similarity=0.237 Sum_probs=231.2
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcC-------CCCCCC--CCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREG-------FTRYTP--NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAK 165 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~-------~~~Y~~--~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~ 165 (429)
+++|+|+.|.++ +.|+.+.+++.+.+... ...|++ ..+..++++++++++. .. ++++|++|+|++
T Consensus 27 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~----~~-~~~~v~~~~g~t 100 (420)
T 1t3i_A 27 HPLVYLDNAATS-QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFIN----AR-SPREIVYTRNAT 100 (420)
T ss_dssp EECEECBTTTCC-CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTT----CS-CGGGEEEESSHH
T ss_pred CceEEecCCccC-CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcC----CC-CCCeEEEcCChH
Confidence 458999999998 67899999999988652 223432 3556778888888764 21 568999999999
Q ss_pred HHHHHHHHHh----cCCCCEEEEcCCCCCC----hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCC
Q 014172 166 QSILQAVLAV----CSPGDEVIIPAPFWVS----YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSP 237 (429)
Q Consensus 166 ~al~~~l~~l----~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p 237 (429)
+++.+++.++ +++||+|+++.|+|++ +...++..|++++.++++ .++.+|++.+++++++++++|++++|
T Consensus 101 ~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~v~~~~~ 178 (420)
T 1t3i_A 101 EAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLD--EQESFDLEHFKTLLSEKTKLVTVVHI 178 (420)
T ss_dssp HHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBC--TTSSBCHHHHHHHCCTTEEEEEEESB
T ss_pred HHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccC--CCCCcCHHHHHHhhCCCceEEEEeCC
Confidence 9999999999 8999999999999998 567778899999999986 45678999999999989999999999
Q ss_pred CCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcC
Q 014172 238 SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP 317 (429)
Q Consensus 238 ~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~ 317 (429)
+||||.+++ +++|.++|++| |+++|+|++|..+.. ...+.. .+.++++.||||.+|.+| +||++++
T Consensus 179 ~nptG~~~~---l~~i~~l~~~~-~~~li~D~a~~~~~~----~~~~~~----~~~di~~~s~sK~~~~~g--~G~~~~~ 244 (420)
T 1t3i_A 179 SNTLGCVNP---AEEIAQLAHQA-GAKVLVDACQSAPHY----PLDVQL----IDCDWLVASGHKMCAPTG--IGFLYGK 244 (420)
T ss_dssp CTTTCBBCC---HHHHHHHHHHT-TCEEEEECTTTTTTS----CCCHHH----HTCSEEEEEGGGTTSCTT--CEEEEEC
T ss_pred cccccCcCC---HHHHHHHHHHc-CCEEEEEhhhccCCc----cCchhh----cCCCEEEEehhhhcCCCc--eEEEEEc
Confidence 999999999 89999999999 999999999986321 112222 246799999999988777 9999999
Q ss_pred HHHHHHHHHHhhc--------------------ccCCCchHHHHHHHH-HHhcCCCChHHHHHHHHHHHHHHHHHHHHhc
Q 014172 318 KHFVAACNKIQSQ--------------------FTSGASSISQKAGVA-ALGLGYAGGEVVSKMVKAFRERRDFLVKSFG 376 (429)
Q Consensus 318 ~~~~~~l~~~~~~--------------------~~~~~~~~~q~aa~~-~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~ 376 (429)
+++++.+...... +..+.+.+.+.++.. +++.- .+.++++++++++++++++.+.|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~ 322 (420)
T 1t3i_A 245 EEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYL--TDLGMENIHNYEVELTHYLWQGLG 322 (420)
T ss_dssp HHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHH--HHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHH--HHhHHHHHHHHHHHHHHHHHHHHH
Confidence 9988877654321 223466677766554 45430 022467888999999999999999
Q ss_pred cCCCceeecCC------ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 377 ELEGVKMSEPQ------GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 377 ~l~g~~~~~p~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+++|+++..|. ++++ ++.++.. +..++++.|. +.||.+
T Consensus 323 ~~~g~~~~~~~~~~~~~~~~~-~~~~~~~------------~~~~~~~~l~-~~gi~v 366 (420)
T 1t3i_A 323 QIPQLRLYGPNPKHGDRAALA-SFNVAGL------------HASDVATMVD-QDGIAI 366 (420)
T ss_dssp TCTTEEEESCCGGGSCBCSEE-EEEETTB------------CHHHHHHHHH-TTTEEC
T ss_pred hCCCeEEeCCCccccccCCEE-EEEECCC------------CHHHHHHHHH-HCCeEE
Confidence 98899887764 5665 4567642 5778887665 459876
No 84
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=2.7e-33 Score=278.93 Aligned_cols=280 Identities=16% Similarity=0.162 Sum_probs=216.3
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHH-----cCCCCCCCCCCCH---HHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 97 VIRLAAGEPDFDTPVLIAEAGINAIR-----EGFTRYTPNAGTL---ELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 97 ~i~L~~g~~~~~~p~~v~~a~~~~~~-----~~~~~Y~~~~G~~---~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
...++.|+|++++|+.+.+++.+.+. .+.+.|+. .|.+ +|+++++++++ .+++++++|+++++
T Consensus 20 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~g--------~~~~i~~~~g~~ai 90 (404)
T 1e5e_A 20 DQFGAAIPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLEK--------TEACVATSSGMGAI 90 (404)
T ss_dssp CTTCCSSCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHHT--------CSEEEEESSHHHHH
T ss_pred CCCCCcCCCCcCCCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHhC--------CCcEEEeCChHHHH
Confidence 45789999999998777666665553 23456766 5666 89999998873 13788888889999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCCChHH----HHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCC
Q 014172 169 LQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSV 244 (429)
Q Consensus 169 ~~~l~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~ 244 (429)
..++++++++||+|+++.|+|.++.. .++..|++++.++.+ |++++++.+++++++|++++|+||||.+
T Consensus 91 ~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~t~~v~l~~p~NptG~v 163 (404)
T 1e5e_A 91 AATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-------IPGEVKKHMKPNTKIVYFETPANPTLKI 163 (404)
T ss_dssp HHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-------STTHHHHHCCTTEEEEEEESSCTTTCCC
T ss_pred HHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-------CHHHHHHhcCCCCcEEEEECCCCCCCcc
Confidence 99999999999999999999999888 788899999999863 7889999999899999999999999999
Q ss_pred CCHHHHHHHHHHHHh-CCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccccccee-eEEEcCHHHHH
Q 014172 245 YPKNLLDEIARIVAK-HPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVA 322 (429)
Q Consensus 245 ~~~~~l~~I~~~a~~-~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~-G~v~~~~~~~~ 322 (429)
++ +++|+++|++ | |+++|+||+|..+.+. .++ . .++++++.|+||.++++|+|+ ||+++++++++
T Consensus 164 ~~---l~~i~~la~~~~-~~~li~De~~~~~~~~----~~~-~----~~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~ 230 (404)
T 1e5e_A 164 ID---MERVCKDAHSQE-GVLVIADNTFCSPMIT----NPV-D----FGVDVVVHSATKYINGHTDVVAGLICGKADLLQ 230 (404)
T ss_dssp CC---HHHHHHHHHTST-TCEEEEECTTTCTTTC----CGG-G----GTCSEEEEETTTTTTCSSCCCCEEEEECHHHHH
T ss_pred cC---HHHHHHHHHhhc-CCEEEEECCCchhhhC----Ccc-c----cCCEEEEEcCccccCCCCCCeEEEEEECHHHHH
Confidence 98 9999999999 9 9999999999987653 122 1 367899999999999999998 99999999888
Q ss_pred -HHHHHhhcc-cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc--------------CCCceeecC
Q 014172 323 -ACNKIQSQF-TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE--------------LEGVKMSEP 386 (429)
Q Consensus 323 -~l~~~~~~~-~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~--------------l~g~~~~~p 386 (429)
.+......+ +.+.+.+.+.++..+++. ....+ +...++.+.+.+.|++ +||+++.++
T Consensus 231 ~~l~~~~~~~~g~~~~~~~~~~~~~~l~~---~~~~~----~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~ 303 (404)
T 1e5e_A 231 QIRMVGIKDITGSVISPHDAWLITRGLST---LNIRM----KAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKK 303 (404)
T ss_dssp HHHHTCCCCCCCCCCCHHHHHHHHHHHTT---HHHHH----HHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHH
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHhHhH---HHHHH----HHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHh
Confidence 777766555 566888899988888874 22222 2233333333333332 345555444
Q ss_pred C----ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCee
Q 014172 387 Q----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVL 427 (429)
Q Consensus 387 ~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~ 427 (429)
+ ++|+.| ++++ ..+.+.+++++.||.
T Consensus 304 ~~~~~g~~~~~-~~~~--------------~~~~~~~~l~~~~i~ 333 (404)
T 1e5e_A 304 QMRMYGSMITF-ILKS--------------GFEGAKKLLDNLKLI 333 (404)
T ss_dssp HCSSCCSEEEE-EETT--------------HHHHHHHHHHTCSSS
T ss_pred hCCCCceEEEE-EeCC--------------CHHHHHHHHHhCCCc
Confidence 4 888777 7752 334556677777763
No 85
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=100.00 E-value=2.8e-33 Score=277.27 Aligned_cols=297 Identities=16% Similarity=0.170 Sum_probs=227.0
Q ss_pred CCCeEEcCCCCC-CCCChHHHHHHHHHHHHcCCC-----CC--CCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChH
Q 014172 94 GVSVIRLAAGEP-DFDTPVLIAEAGINAIREGFT-----RY--TPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAK 165 (429)
Q Consensus 94 g~~~i~L~~g~~-~~~~p~~v~~a~~~~~~~~~~-----~Y--~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~ 165 (429)
|+++|+|+.|.| ++..++.+.+++.+.+.+... .| +...+..++++++++++ | .++.|++++| +
T Consensus 42 g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----~---~~~~i~~~sG-t 113 (399)
T 3tqx_A 42 EKEVLNFCANNYLGLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFL----G---TDDTILYSSC-F 113 (399)
T ss_dssp TEEEEECSSCCTTSCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHH----T---CSEEEEESCH-H
T ss_pred CeeEEEeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHH----C---CCcEEEECch-H
Confidence 456899999965 334578999999988765211 11 12223466777777765 4 2345555555 7
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------CCcEEEEcCCCC
Q 014172 166 QSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSN 239 (429)
Q Consensus 166 ~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~~~~i~l~~p~N 239 (429)
+++..++.+++++||.|+++.|+|..+...++..|++++.++. .|++.+++.+++ ++++|++++|+|
T Consensus 114 ~a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~n 186 (399)
T 3tqx_A 114 DANGGLFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKN-------NAMGDLEAKLKEADEKGARFKLIATDGVFS 186 (399)
T ss_dssp HHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECT-------TCTTHHHHHHHHHHTTTCSSEEEEEESEET
T ss_pred HHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCC-------CCHHHHHHHHHhhhccCCCceEEEEeCCCC
Confidence 7999999999999999999999999999999999999999985 367788888765 799999999999
Q ss_pred CccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCC-CCCceEEEeccChhcccccceeeEEEcCH
Q 014172 240 PTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG-MWERTLTVNGFSKAFAMTGWRLGYIAGPK 318 (429)
Q Consensus 240 PtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~~~G~R~G~v~~~~ 318 (429)
|||.+++ +++|.++|++| |+++|+||+|+...++... .+.....+ ..+.+++++||||.++ |.+.||+++++
T Consensus 187 ptG~~~~---l~~i~~l~~~~-~~~li~De~~~~~~~~~~~-~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~~ 259 (399)
T 3tqx_A 187 MDGIIAD---LKSICDLADKY-NALVMVDDSHAVGFIGENG-RGTPEYCGVADRVDILTGTLGKALG--GASGGYTSGHK 259 (399)
T ss_dssp TTTEECC---HHHHHHHHHHT-TCEEEEECTTTTTTSSTTS-CCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEECH
T ss_pred CCCCcCC---HHHHHHHHHHc-CCEEEEECCccccccCCCC-CchHHhhCCCCCCcEEEecchHhcc--cCceEEEEcCH
Confidence 9999999 99999999999 9999999999743333222 12222211 1356799999999998 34559999999
Q ss_pred HHHHHHHHHhhc--ccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEec
Q 014172 319 HFVAACNKIQSQ--FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDF 396 (429)
Q Consensus 319 ~~~~~l~~~~~~--~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l 396 (429)
++++.+...... +..+.+.+.+.++.++++. ..++.++++++++++++++.+.|+++ |+++.++.+++ +|+.+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-~~~~~ 334 (399)
T 3tqx_A 260 EIIEWLRNRSRPYLFSNTVAPVIVATSLKVLEL---LKTEGPQLRKQLQENSRYFRAGMEKL-GFQLVPGNHPI-IPVML 334 (399)
T ss_dssp HHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHH---HHHTHHHHHHHHHHHHHHHHHHHHHH-TCCBCCCSSSE-EEEEE
T ss_pred HHHHHHHHhCcceeccCCCcHHHHHHHHHHHHH---HhhccHHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCE-EEEEe
Confidence 999998875332 2335677777788888875 22668899999999999999999998 88887666655 77888
Q ss_pred CCccCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 397 STYYGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
+.. .+..+++++|+++ ||.+.
T Consensus 335 ~~~-----------~~~~~~~~~l~~~-gi~v~ 355 (399)
T 3tqx_A 335 GDA-----------QLATNMADHLLQE-GIYVV 355 (399)
T ss_dssp ECH-----------HHHHHHHHHHHHT-TEECC
T ss_pred CCH-----------HHHHHHHHHHHHC-CCEEe
Confidence 643 2578999999886 99863
No 86
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=6.7e-33 Score=274.85 Aligned_cols=296 Identities=16% Similarity=0.232 Sum_probs=230.0
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcCC---CCC------CCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecCh
Q 014172 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGF---TRY------TPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGA 164 (429)
Q Consensus 94 g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~---~~Y------~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~ 164 (429)
|+++|+|+.+.++ +.|+.+.+++.+.+.+.. ..| .+..+..++++++++++ |.. ++++|++|+|+
T Consensus 21 g~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~~~-~~~~v~~~~g~ 94 (406)
T 1kmj_A 21 GLPLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFI----NAR-SAEELVFVRGT 94 (406)
T ss_dssp TEECEECCTTTCC-CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHT----TCS-CGGGEEEESSH
T ss_pred CCceEEecCCccC-CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHc----CCC-CCCeEEEeCCh
Confidence 3468999999988 567899999999887532 111 13345667888888776 321 46899999999
Q ss_pred HHHHHHHHHHh----cCCCCEEEEcCCCCCCh----HHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcC
Q 014172 165 KQSILQAVLAV----CSPGDEVIIPAPFWVSY----PEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS 236 (429)
Q Consensus 165 ~~al~~~l~~l----~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~ 236 (429)
++++..++.++ +++||+|+++.|+|++. ...++..|++++.++++. ++.+|++.|++++++++++|++++
T Consensus 95 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~v~~~~ 172 (406)
T 1kmj_A 95 TEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPTLFDEKTRLLAITH 172 (406)
T ss_dssp HHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCT--TSCBCGGGHHHHCCTTEEEEEEES
T ss_pred hHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCC--CCCcCHHHHHHHhccCCeEEEEeC
Confidence 99999999999 89999999999998764 345778899999999863 466899999999998999999999
Q ss_pred CCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEc
Q 014172 237 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG 316 (429)
Q Consensus 237 p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~ 316 (429)
|+||||.+++ +++|.++|++| |+++|+||+|..+. ....+.. .+.++++.||||.+|++| +||+++
T Consensus 173 ~~nptG~~~~---l~~i~~l~~~~-~~~li~D~~~~~g~----~~~~~~~----~~~d~~~~s~~K~~g~~G--~G~~~~ 238 (406)
T 1kmj_A 173 VSNVLGTENP---LAEMITLAHQH-GAKVLVDGAQAVMH----HPVDVQA----LDCDFYVFSGHKLYGPTG--IGILYV 238 (406)
T ss_dssp BCTTTCCBCC---HHHHHHHHHHT-TCEEEEECTTTTTT----SCCCHHH----HTCSEEEEEGGGTTSCTT--CEEEEE
T ss_pred CCccccCcCC---HHHHHHHHHHc-CCEEEEEchhhcCC----CCCcccc----cCCCEEEEEchhccCCCC--cEEEEE
Confidence 9999999999 99999999999 99999999998632 1112211 256799999999998778 899999
Q ss_pred CHHHHHHHHHHhh---------------------cccCCCchHHHHHHH-HHHhcCCCCh-HHHHHHHHHHHHHHHHHHH
Q 014172 317 PKHFVAACNKIQS---------------------QFTSGASSISQKAGV-AALGLGYAGG-EVVSKMVKAFRERRDFLVK 373 (429)
Q Consensus 317 ~~~~~~~l~~~~~---------------------~~~~~~~~~~q~aa~-~~l~~~~~~~-~~~~~~~~~~~~~r~~l~~ 373 (429)
++++++.+..... .+..+.+.+.+.++. ++++. .. .++++++++++++++++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~~~~~l~~ 315 (406)
T 1kmj_A 239 KEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEY---VSALGLNNIAEYEQNLMHYALS 315 (406)
T ss_dssp CHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHH
T ss_pred eHHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHH---HHHcCHHHHHHHHHHHHHHHHH
Confidence 9998887754331 122345667776655 55553 12 3577888999999999999
Q ss_pred HhccCCCceeecC--CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 374 SFGELEGVKMSEP--QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 374 ~L~~l~g~~~~~p--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.|++++|+++..+ .++++.| .+++. +..++++.|.++ ||.+
T Consensus 316 ~L~~~~~~~~~~~~~~~~~~~~-~~~~~------------~~~~~~~~l~~~-gi~v 358 (406)
T 1kmj_A 316 QLESVPDLTLYGPQNRLGVIAF-NLGKH------------HAYDVGSFLDNY-GIAV 358 (406)
T ss_dssp HHTTSTTEEEESCTTCCSEEEE-EETTC------------CHHHHHHHHHHT-TEEC
T ss_pred HHhcCCCeEEecCCCcCCEEEE-EECCC------------CHHHHHHHHhhC-CcEE
Confidence 9999889998887 7887665 56532 677888776554 9875
No 87
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=100.00 E-value=1.1e-32 Score=272.17 Aligned_cols=296 Identities=12% Similarity=0.096 Sum_probs=229.1
Q ss_pred cCCCeEEcCCCCC-CCCChHHHHHHHHHHHHc-CC----CCC--CCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecCh
Q 014172 93 AGVSVIRLAAGEP-DFDTPVLIAEAGINAIRE-GF----TRY--TPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGA 164 (429)
Q Consensus 93 ~g~~~i~L~~g~~-~~~~p~~v~~a~~~~~~~-~~----~~Y--~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~ 164 (429)
.|+.+|+|+.|.+ ++++|+.+.+++.+.+.+ +. ..| +...+..++|+++++++ |. ++.+++++|
T Consensus 37 ~g~~~id~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~~i~~~sG- 108 (384)
T 1bs0_A 37 DDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL----GY---SRALLFISG- 108 (384)
T ss_dssp TTEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH----TC---SEEEEESCH-
T ss_pred CCceEEEeeccCccCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHh----CC---CcEEEeCCc-
Confidence 3567999999985 556788999999998865 21 223 34456678888888887 42 245555555
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccC---CcEEEEcCCCCCc
Q 014172 165 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEK---SRLLILCSPSNPT 241 (429)
Q Consensus 165 ~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~---~~~i~l~~p~NPt 241 (429)
++++..++++++++||.|+++.|+|..+...++..|++++.+|. .|++++++.+++. ++++++++|||||
T Consensus 109 t~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~v~~~~~~npt 181 (384)
T 1bs0_A 109 FAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASPCPGQQMVVTEGVFSMD 181 (384)
T ss_dssp HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSCCSSCEEEEEESBCTTT
T ss_pred HHHHHHHHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCC-------CCHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 89999999999999999999999999999999999999999984 4899999988653 6788899999999
Q ss_pred cCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHH
Q 014172 242 GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFV 321 (429)
Q Consensus 242 G~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~ 321 (429)
|.+++ +++|.++|++| |++||+||+|..+.++.........+. .+.+++++||||.++++| ||++++++++
T Consensus 182 G~~~~---l~~i~~l~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~--~~~di~~~s~sK~~~~~G---G~~~~~~~~~ 252 (384)
T 1bs0_A 182 GDSAP---LAEIQQVTQQH-NGWLMVDDAHGTGVIGEQGRGSCWLQK--VKPELLVVTFGKGFGVSG---AAVLCSSTVA 252 (384)
T ss_dssp CCBCC---HHHHHHHHHHT-TCEEEEECTTTTTTSSGGGCCHHHHTT--CCCSEEEEESSSTTSSCC---EEEEECHHHH
T ss_pred CCccC---HHHHHHHHHHc-CcEEEEECCcccceecCCCCchHHhcC--CCCcEEEeeccchhhccC---cEEEeCHHHH
Confidence 99999 89999999999 999999999987655311111111122 134499999999999777 9999999999
Q ss_pred HHHHHHhhcc--cCCCchHHHHHHHHHHhcCCCChH-HHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCC
Q 014172 322 AACNKIQSQF--TSGASSISQKAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFST 398 (429)
Q Consensus 322 ~~l~~~~~~~--~~~~~~~~q~aa~~~l~~~~~~~~-~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~ 398 (429)
+.+......+ +.+++.+.+.++.++++. ..+ +.++.+++++++++++.+.|+++ |+++.+ .++.++|++++.
T Consensus 253 ~~l~~~~~~~~~~~~~~~~~~~~~~~al~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~~ 327 (384)
T 1bs0_A 253 DYLLQFARHLIYSTSMPPAQAQALRASLAV---IRSDEGDARREKLAALITRFRAGVQDL-PFTLAD-SCSAIQPLIVGD 327 (384)
T ss_dssp HHHHHHCHHHHSSBCCCHHHHHHHHHHHHH---HHSHHHHHHHHHHHHHHHHHHHHHTTS-SCEECS-CCSSBCCEEEES
T ss_pred HHHHHhchhhhcCCCCCHHHHHHHHHHHHH---HhccccHHHHHHHHHHHHHHHHHHHhc-CCcccC-CCCCEEEEEeCC
Confidence 8887653222 335788888888888875 222 67889999999999999999998 888764 445557888864
Q ss_pred ccCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 399 YYGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
. .+..+++++|+++ ||.+.
T Consensus 328 ~-----------~~~~~l~~~l~~~-gi~v~ 346 (384)
T 1bs0_A 328 N-----------SRALQLAEKLRQQ-GCWVT 346 (384)
T ss_dssp H-----------HHHHHHHHHHHHT-TEECC
T ss_pred H-----------HHHHHHHHHHHHC-CcEEE
Confidence 2 2577899999877 99863
No 88
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=100.00 E-value=6.6e-33 Score=274.33 Aligned_cols=287 Identities=15% Similarity=0.155 Sum_probs=232.0
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCEEEE
Q 014172 106 DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVII 184 (429)
Q Consensus 106 ~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~gd~Vlv 184 (429)
+.++|+.+.+++.+.+.. .|++ ...++++++++++.+.+|. +++ +|++|+|+++++..++.+++++||+|++
T Consensus 42 ~~~~~~~v~~a~~~~~~~---~~~~--~~~~~~~~~~~~la~~~g~--~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~ 114 (393)
T 1vjo_A 42 PSNAHPSVLQAMNVSPVG---HLDP--AFLALMDEIQSLLRYVWQT--ENPLTIAVSGTGTAAMEATIANAVEPGDVVLI 114 (393)
T ss_dssp CCCCCHHHHHHHSSCCCC---TTSH--HHHHHHHHHHHHHHHHHTC--CCSCEEEESSCHHHHHHHHHHHHCCTTCEEEE
T ss_pred CCCCCHHHHHHHhccccc---ccCH--HHHHHHHHHHHHHHHHhCC--CCCcEEEEeCchHHHHHHHHHhccCCCCEEEE
Confidence 345678888887765422 4643 2568999999999998885 567 8999999999999999999999999999
Q ss_pred cCCCCCC--hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCC
Q 014172 185 PAPFWVS--YPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP 261 (429)
Q Consensus 185 ~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~ 261 (429)
++|+|.+ +...++..|++++.++++. ++.+|++.|++.+++ ++++|++++|+||||.+++ +++|.++|++|
T Consensus 115 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~- 188 (393)
T 1vjo_A 115 GVAGYFGNRLVDMAGRYGADVRTISKPW--GEVFSLEELRTALETHRPAILALVHAETSTGARQP---LEGVGELCREF- 188 (393)
T ss_dssp EESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHH-
T ss_pred EcCChhHHHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHhhCCceEEEEeccCCCcceecc---HHHHHHHHHHc-
Confidence 9999999 8999999999999999864 456899999999988 8999999999999999999 88999999999
Q ss_pred CeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHH----h---------
Q 014172 262 RLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI----Q--------- 328 (429)
Q Consensus 262 ~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~----~--------- 328 (429)
|+++|+||+|.. +..+.. +. ..+.++++.|+||.++.+| |+||+++++++++.+... .
T Consensus 189 ~~~li~Dea~~~----g~~~~~---~~-~~~~di~~~s~sK~l~~~~-~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (393)
T 1vjo_A 189 GTLLLVDTVTSL----GGVPIF---LD-AWGVDLAYSCSQKGLGCSP-GASPFTMSSRAIEKLQRRRTKVANWYLDMNLL 259 (393)
T ss_dssp TCEEEEECTTTT----TTSCCC---TT-TTTCSEEECCSSSTTCSCS-SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHH
T ss_pred CCEEEEECCccc----cCcCCc---cc-ccCccEEEEcCcccccCCC-ceEEEEECHHHHHHHhccCCCCCceecCcHhh
Confidence 999999999983 222222 22 2466799999999998677 999999999988877532 0
Q ss_pred ------hcccC-CCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCc---eEEEEEecCC
Q 014172 329 ------SQFTS-GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG---AFYLFIDFST 398 (429)
Q Consensus 329 ------~~~~~-~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~---~~~~~~~l~~ 398 (429)
..... +++.+.|.++.++++.. .++++++++++++++++++.+.|+++ |+++..|++ +.++++.++.
T Consensus 260 ~~~~~~~~~~~g~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~ 336 (393)
T 1vjo_A 260 GKYWGSERVYHHTAPINLYYALREALRLI--AQEGLANCWQRHQKNVEYLWERLEDI-GLSLHVEKEYRLPTLTTVCIPD 336 (393)
T ss_dssp HHHHSTTCCCCSCCCHHHHHHHHHHHHHH--HHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEECCT
T ss_pred hhhhccCCCCCCCCCHHHHHHHHHHHHHH--HHccHHHHHHHHHHHHHHHHHHHHHc-CCcccCCccccCCcEEEEEcCC
Confidence 01223 67888899888888751 12357889999999999999999998 888877765 3457788763
Q ss_pred ccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 399 YYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
. .+..+++++|++++||.+
T Consensus 337 ~-----------~~~~~~~~~l~~~~gi~v 355 (393)
T 1vjo_A 337 G-----------VDGKAVARRLLNEHNIEV 355 (393)
T ss_dssp T-----------CCHHHHHHHHHHHHCEEC
T ss_pred C-----------CCHHHHHHHHHhhCCEEE
Confidence 2 268899999988778876
No 89
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.2e-32 Score=269.54 Aligned_cols=293 Identities=15% Similarity=0.159 Sum_probs=233.0
Q ss_pred EEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcC
Q 014172 98 IRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS 177 (429)
Q Consensus 98 i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~ 177 (429)
+.|....+. ..|+.+.+++.+.+. ..|++. ..++++++++++.+.+|.+ ++++|++|+|+++++..++.++++
T Consensus 21 ~~l~~~~~~-~~~~~v~~a~~~~~~---~~~~~~--~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~a~~~~~~~l~~ 93 (386)
T 2dr1_A 21 YKLFTAGPV-ACFPEVLEIMKVQMF---SHRSKE--YRKVHMDTVERLREFLEVE-KGEVLLVPSSGTGIMEASIRNGVS 93 (386)
T ss_dssp SEECCSSSC-CCCHHHHHHTTSCCC---CTTSHH--HHHHHHHHHHHHHHHHTCS-SSEEEEESSCHHHHHHHHHHHHSC
T ss_pred ceeecCCCc-CCcHHHHHHHhcccc---cccCHH--HHHHHHHHHHHHHHHhCCC-CCcEEEEeCChHHHHHHHHHHhhc
Confidence 334433333 446778777665432 256432 3789999999999988965 467899999999999999999999
Q ss_pred CCCEEEEcCCCCCC--hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhc--ccCCcEEEEcCCCCCccCCCCHHHHHHH
Q 014172 178 PGDEVIIPAPFWVS--YPEMARIADATPVILPTRISENFLLDPKVLESKL--TEKSRLLILCSPSNPTGSVYPKNLLDEI 253 (429)
Q Consensus 178 ~gd~Vlv~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l--~~~~~~i~l~~p~NPtG~~~~~~~l~~I 253 (429)
+||+|++++|+|.+ +...++..|++++.++.+. ++.+|+++|++++ .+++++|++++|+||||.+.+ +++|
T Consensus 94 ~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i 168 (386)
T 2dr1_A 94 KGGKVLVTIIGAFGKRYKEVVESNGRKAVVLEYEP--GKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNP---LPEL 168 (386)
T ss_dssp TTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHH
T ss_pred CCCeEEEEcCCchhHHHHHHHHHhCCceEEEecCC--CCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCC---HHHH
Confidence 99999999999998 8889999999999999864 4668999999999 568999999999999999998 8999
Q ss_pred HHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHH--------
Q 014172 254 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN-------- 325 (429)
Q Consensus 254 ~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~-------- 325 (429)
.++|++| |+++|+||+|..+.+. .++ . ..+.++++.||||.++.++ ++||+++++++++.+.
T Consensus 169 ~~l~~~~-~~~li~D~a~~~~~~~----~~~---~-~~~~di~~~s~sK~~~~~~-g~G~~~~~~~~~~~~~~~~~~~~~ 238 (386)
T 2dr1_A 169 AKVAKEH-DKLVFVDAVSAMGGAD----IKF---D-KWGLDVVFSSSQKAFGVPP-GLAIGAFSERFLEIAEKMPERGWY 238 (386)
T ss_dssp HHHHHHT-TCEEEEECTTTBTTBC----CCT---T-TTTCSEEEEETTSTTCCCS-SCEEEEECHHHHHHHTTCTTCCST
T ss_pred HHHHHHc-CCeEEEEccccccCcc----ccc---c-ccCCcEEEEeccccccCCC-ceEEEEECHHHHHHHhcCCCCceE
Confidence 9999999 9999999999975431 122 1 1356799999999998552 4999999999887762
Q ss_pred --------HH--hhcccCCCchHHHHHHHHHHhcCCCChH--HHHHHHHHHHHHHHHHHHHhccCCCceeecCC---ceE
Q 014172 326 --------KI--QSQFTSGASSISQKAGVAALGLGYAGGE--VVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ---GAF 390 (429)
Q Consensus 326 --------~~--~~~~~~~~~~~~q~aa~~~l~~~~~~~~--~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~---~~~ 390 (429)
.. ......+++.+.|.++.++|+. ..+ ++++++++++++++++.+.|+++ |+++..++ .++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~---~~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~ 314 (386)
T 2dr1_A 239 FDIPLYVKYLKEKESTPSTPPMPQVFGINVALRI---IEKMGGKEKWLEMYEKRAKMVREGVREI-GLDILAEPGHESPT 314 (386)
T ss_dssp TCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHH---HHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCTTCBCSS
T ss_pred EeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH---HHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCeeCcCccccCCc
Confidence 22 1234456788889888888875 233 37788999999999999999998 88887765 366
Q ss_pred EEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 391 YLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 391 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++|++++.. .+..+++++|+++ ||.+
T Consensus 315 ~~~~~~~~~-----------~~~~~~~~~l~~~-gi~v 340 (386)
T 2dr1_A 315 ITAVLTPPG-----------IKGDEVYEAMRKR-GFEL 340 (386)
T ss_dssp EEEEECCTT-----------CCHHHHHHHHHHT-TEEC
T ss_pred eEEEEcCCC-----------CCHHHHHHHHHHC-CeEE
Confidence 789988742 2688999999888 9876
No 90
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=100.00 E-value=4.3e-33 Score=274.93 Aligned_cols=299 Identities=18% Similarity=0.140 Sum_probs=228.6
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCC----C---CCCC-CCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGF----T---RYTP-NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~----~---~Y~~-~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~a 167 (429)
+.|+|+.|.+. +.|+.+.+++.+.+.... . .|.. ..+..++++++++++ | +++++|++|+|++++
T Consensus 16 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~----g--~~~~~v~~~~g~t~a 88 (390)
T 1elu_A 16 NKTYFNFGGQG-ILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETF----N--VDPNTITITDNVTTG 88 (390)
T ss_dssp TSEECCTTTCC-CCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHT----T--SCGGGEEEESSHHHH
T ss_pred CeEEecCCccC-CCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHc----C--CCHHHEEEeCChHHH
Confidence 47999988744 457889999988875421 1 3422 256678888888886 3 466799999999999
Q ss_pred HHHHHHHh-cCCCCEEEEcCCCCCChHHH----HHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCcc
Q 014172 168 ILQAVLAV-CSPGDEVIIPAPFWVSYPEM----ARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTG 242 (429)
Q Consensus 168 l~~~l~~l-~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG 242 (429)
+..+++++ +++||+|+++.|+|.++... ++..|++++.++++.++++.+|++.|++.+++++++|++++|+||||
T Consensus 89 ~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG 168 (390)
T 1elu_A 89 CDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWNTG 168 (390)
T ss_dssp HHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTTTC
T ss_pred HHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEeccccCCc
Confidence 99999999 89999999999999997754 56789999999986545677999999999998999999999999999
Q ss_pred CCCCHHHHHHHHHHHH----hCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCH
Q 014172 243 SVYPKNLLDEIARIVA----KHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK 318 (429)
Q Consensus 243 ~~~~~~~l~~I~~~a~----~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~ 318 (429)
.+++ +++|.++|+ +| |+++|+||+|... ..... +. ..+.++++.|+||.+. +|.++||+++++
T Consensus 169 ~~~~---~~~i~~l~~~~~~~~-~~~li~Dea~~~g----~~~~~---~~-~~~~d~~~~s~~K~~~-~~~g~G~~~~~~ 235 (390)
T 1elu_A 169 QVLP---LAEIMAVCRRHQGNY-PVRVLVDGAQSAG----SLPLD---FS-RLEVDYYAFTGHKWFA-GPAGVGGLYIHG 235 (390)
T ss_dssp CBCC---HHHHHHHHHHCCSSS-CCEEEEECTTTBT----TBCCC---TT-TSCCSEEEEESSSTTC-CCTTCEEEEECT
T ss_pred eecC---HHHHHHHHhhhhhhc-CcEEEEEcccccC----CcCCC---hh-hcCCCEEEcccccccc-CCCceEEEEECH
Confidence 9999 899999999 99 9999999999852 21111 11 1356799999999543 667799999998
Q ss_pred HHHHHHHHHh----------------------hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhc
Q 014172 319 HFVAACNKIQ----------------------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG 376 (429)
Q Consensus 319 ~~~~~l~~~~----------------------~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~ 376 (429)
++++.+.... .....+++...+.++.++++.-. ...++++++++++++++++.+.|+
T Consensus 236 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~-~~~~~~~~~~~~~~~~~~l~~~L~ 314 (390)
T 1elu_A 236 DCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQ-RQGTAEERYQAICQRSEFLWRGLN 314 (390)
T ss_dssp TTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHHHH
Confidence 8877654321 11223456666776666665300 022478899999999999999999
Q ss_pred cCCCceeec---CCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 377 ELEGVKMSE---PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 377 ~l~g~~~~~---p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+++|+++.. +.++|+.| +++.. .+..+++++|.++ ||.+
T Consensus 315 ~~~g~~~~~~~~~~~~~~~~-~~~~~-----------~~~~~~~~~l~~~-gi~v 356 (390)
T 1elu_A 315 QLPHVHCLATSAPQAGLVSF-TVDSP-----------LGHRAIVQKLEEQ-RIYL 356 (390)
T ss_dssp HSTTEEESCSSCCSSSEEEE-EECSS-----------SCHHHHHHHHHHT-TEEC
T ss_pred hcCCcEEecCccccccEEEE-EcCCC-----------CCHHHHHHHHHHC-CEEE
Confidence 988888874 46777555 77532 2678899998655 9876
No 91
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=1.8e-32 Score=269.75 Aligned_cols=291 Identities=17% Similarity=0.169 Sum_probs=225.3
Q ss_pred EEcCCCCCCCCChHHHHHHHHHHHHcCCCC--------CCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 98 IRLAAGEPDFDTPVLIAEAGINAIREGFTR--------YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 98 i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~--------Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
+.|+.+.+. ++|+.+.+++.+.+.+.... |.+..+..++++++++++ | +++++|++|+|+++++.
T Consensus 3 ~yld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~~v~~~~g~t~a~~ 75 (384)
T 1eg5_A 3 VYFDNNATT-RVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVL----G--VSPSEIFFTSCATESIN 75 (384)
T ss_dssp EECBTTTCC-CCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHH----T--SCGGGEEEESCHHHHHH
T ss_pred EEEecCccC-CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHc----C--CCCCeEEEECCHHHHHH
Confidence 677777766 66889999999988752111 112234567888888876 3 46789999999999999
Q ss_pred HHHHHhc----CCCCEEEEcCCCCCChHHHH---HHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCcc
Q 014172 170 QAVLAVC----SPGDEVIIPAPFWVSYPEMA---RIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTG 242 (429)
Q Consensus 170 ~~l~~l~----~~gd~Vlv~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG 242 (429)
.++++++ ++||+|+++.|+|+++...+ +..|++++.+|++. ++.+|+++|++++++++++|++++|+||||
T Consensus 76 ~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~nptG 153 (384)
T 1eg5_A 76 WILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDS--RGVVKLEELEKLVDEDTFLVSIMAANNEVG 153 (384)
T ss_dssp HHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCT--TSCBCHHHHHHHCCTTEEEEEEESBCTTTC
T ss_pred HHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCC--CCccCHHHHHHHhCCCCeEEEEECCCCCcc
Confidence 9999998 79999999999999887655 77899999999863 467899999999998999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhCCC--eEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHH
Q 014172 243 SVYPKNLLDEIARIVAKHPR--LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF 320 (429)
Q Consensus 243 ~~~~~~~l~~I~~~a~~~~~--i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~ 320 (429)
.+++ +++|.++|++| | ++||+||+|.. +. ....+ .. .+.++++.|+||.+|++| +||+++++++
T Consensus 154 ~~~~---~~~i~~l~~~~-~~~~~li~Dea~~~---~~-~~~~~---~~-~~~di~~~s~sK~~g~~G--~G~~~~~~~~ 219 (384)
T 1eg5_A 154 TIQP---VEDVTRIVKKK-NKETLVHVDAVQTI---GK-IPFSL---EK-LEVDYASFSAHKFHGPKG--VGITYIRKGV 219 (384)
T ss_dssp BBCC---HHHHHHHHHHH-CTTCEEEEECTTTT---TT-SCCCC---TT-TCCSEEEEEGGGGTSCTT--CEEEEECTTS
T ss_pred cccC---HHHHHHHHHhc-CCceEEEEEhhhhc---CC-cccCc---hh-cCCCEEEecHHHhcCCCc--eEEEEEcCCC
Confidence 9999 88999999999 9 99999999983 22 12222 22 256799999999999878 7999998875
Q ss_pred --HHHHHHH---hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCC-c--eEEE
Q 014172 321 --VAACNKI---QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ-G--AFYL 392 (429)
Q Consensus 321 --~~~l~~~---~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~-~--~~~~ 392 (429)
...+... ......+++.+.+.++.++|+. ..+++++++++++++++++.+.|++ +|+++..+. + +.++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~ 295 (384)
T 1eg5_A 220 PIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEI---AVEELSEAAKHMEKLRSKLVSGLMN-LGAHIITPLEISLPNTL 295 (384)
T ss_dssp CCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHH---HHHTHHHHHHHHHHHHHHHHHHHHT-TTCEECSCTTSBCTTEE
T ss_pred ccccccccCcccccccCCCCChHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHHhCC-CCeEEeCCcccCCCCEE
Confidence 2222111 1123446788899888888875 3567888999999999999999998 488886553 2 2346
Q ss_pred EEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 393 FIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 393 ~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++.+++. +..+++++|.+ +||.+
T Consensus 296 ~~~~~~~------------~~~~~~~~l~~-~gi~v 318 (384)
T 1eg5_A 296 SVSFPNI------------RGSTLQNLLSG-YGIYV 318 (384)
T ss_dssp EEECTTC------------CHHHHHHHHHH-TTEEC
T ss_pred EEEeCCC------------CHHHHHHHHhh-CCeEE
Confidence 6776632 67889988864 59876
No 92
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=100.00 E-value=2.4e-33 Score=275.07 Aligned_cols=290 Identities=12% Similarity=0.100 Sum_probs=221.5
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcC---------CCCCCCCCCCHHHHHH-HHHHHHhhcCCCCCCCcEEEecC
Q 014172 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREG---------FTRYTPNAGTLELRSA-ICHKLKEENGLSYTPDQILVSNG 163 (429)
Q Consensus 94 g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~---------~~~Y~~~~G~~~lr~~-ia~~l~~~~g~~~~~~~i~~t~G 163 (429)
++++|+|+.|.+..++|+.+.+++.+.+... ...|.+..+..+++++ +++++. . + +|++|+|
T Consensus 6 ~~~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~----~--~--~v~~~~g 77 (371)
T 2e7j_A 6 TKDFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLG----C--D--VARVTNG 77 (371)
T ss_dssp --CCEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTT----S--S--EEEEESS
T ss_pred CCCcEEecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcC----C--C--EEEEeCC
Confidence 3468999998877778899999999877542 1234567788999999 999863 2 2 9999999
Q ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEec--CCCCCCCCCCHHHHHhhcc-----cCCcEEEEcC
Q 014172 164 AKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILP--TRISENFLLDPKVLESKLT-----EKSRLLILCS 236 (429)
Q Consensus 164 ~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~--~~~~~~~~~d~e~l~~~l~-----~~~~~i~l~~ 236 (429)
+++++..++++++++||+|++++|+|.++...++..|++++.++ .+ .++.+|+++|+++++ +++++|++++
T Consensus 78 ~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~ 155 (371)
T 2e7j_A 78 AREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDY--PDYAITPENFAQTIEETKKRGEVVLALITY 155 (371)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCT--TTCCCCHHHHHHHHHHHTTTSCEEEEEEES
T ss_pred hHHHHHHHHHHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEeecccC--CCCCcCHHHHHHHHHhhcccCCeEEEEEEC
Confidence 99999999999999999999999999999999999999999999 64 346799999999997 7899999999
Q ss_pred CCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEc
Q 014172 237 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG 316 (429)
Q Consensus 237 p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~ 316 (429)
|+||||.+++ +++|.++|++| |++||+||+|..+.+. .++..+ +..+++.||||.++ .|.|+||+++
T Consensus 156 ~~nptG~~~~---~~~i~~~~~~~-~~~li~D~a~~~~~~~----~~~~~~----~~di~~~s~sK~~~-~~~~~G~~~~ 222 (371)
T 2e7j_A 156 PDGNYGNLPD---VKKIAKVCSEY-DVPLLVNGAYAIGRMP----VSLKEI----GADFIVGSGHKSMA-ASGPIGVMGM 222 (371)
T ss_dssp SCTTTCCCCC---HHHHHHHHHTT-TCCEEEECTTTBTTBC----CCHHHH----TCSEEEEEHHHHSS-CCSSCEEEEE
T ss_pred CCCCCcccCC---HHHHHHHHHHc-CCeEEEECccccCCCC----CChhhc----CCCEEEecCCcCCC-CCCCcEEEEE
Confidence 9999999999 79999999999 9999999999975431 122222 34599999999998 4569999999
Q ss_pred CHHHHHH-HHHHhh--cc-----cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHH--HHHHHHHHHHhccCCCceeecC
Q 014172 317 PKHFVAA-CNKIQS--QF-----TSGASSISQKAGVAALGLGYAGGEVVSKMVKAF--RERRDFLVKSFGELEGVKMSEP 386 (429)
Q Consensus 317 ~~~~~~~-l~~~~~--~~-----~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~--~~~r~~l~~~L~~l~g~~~~~p 386 (429)
++++++. +..... .. ..+++...+.++.++++. ..+ +..+++ +++++++.+.|+++ |+++..|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~---~~~---~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~ 295 (371)
T 2e7j_A 223 KEEWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPH---VRE---RIKRWDEEVEKARRFAAEMEKL-GIKQLGD 295 (371)
T ss_dssp CTTTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHH---HHH---HGGGHHHHHHHHHHHHHHHHHT-TCEEESS
T ss_pred echhhhhhccccccCcccccccccCCcCHHHHHHHHHHHHH---HHH---HHHHHHHHHHHHHHHHHHHHHc-CcEEecC
Confidence 9988776 654432 11 233455555555566653 121 566777 88999999999988 8888766
Q ss_pred C--ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 387 Q--GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 387 ~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
. .+.++|++++ +..+++++|. ++||.+
T Consensus 296 ~~~~~~~~~~~~~--------------~~~~~~~~l~-~~gi~~ 324 (371)
T 2e7j_A 296 NPHNHDLMFFHAE--------------VLYEISKKAK-GGRFFL 324 (371)
T ss_dssp SSCCSSEEEEECH--------------HHHHHHHHSS-SGGGHH
T ss_pred CCccCceEEEECC--------------CHHHHHHHHH-HCCEEE
Confidence 3 3446888885 2567888877 448764
No 93
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=100.00 E-value=4.4e-32 Score=272.01 Aligned_cols=296 Identities=18% Similarity=0.198 Sum_probs=227.0
Q ss_pred cCCCeEEcCCCCC-CCCChHHHHHHHHHHHHc-C--CCCCCCCCCC----HHHHHHHHHHHHhhcCCCCCCCcEEEecCh
Q 014172 93 AGVSVIRLAAGEP-DFDTPVLIAEAGINAIRE-G--FTRYTPNAGT----LELRSAICHKLKEENGLSYTPDQILVSNGA 164 (429)
Q Consensus 93 ~g~~~i~L~~g~~-~~~~p~~v~~a~~~~~~~-~--~~~Y~~~~G~----~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~ 164 (429)
.|+++|+|+.|++ ++..++.+.+++.+.+.. + ...|....|. .+|++++++++ |. +++++++++
T Consensus 62 ~g~~~id~~~~~~lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~----g~----~~~i~~~sG 133 (427)
T 2w8t_A 62 RGKDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFY----GT----TGAIVFSTG 133 (427)
T ss_dssp TTEEEEECSCCCTTCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHH----TC----SEEEEESCH
T ss_pred CCceEEEEECcccccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHh----CC----CceEEecCc
Confidence 4567999999985 545688999999998865 3 2233344455 45555555554 52 255666666
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc----CCcEEEEcCCCCC
Q 014172 165 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE----KSRLLILCSPSNP 240 (429)
Q Consensus 165 ~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~----~~~~i~l~~p~NP 240 (429)
++++..++.+++++||.|+++.|+|.++...++..|++++.++. .|++.|++.+++ ++++|++++++||
T Consensus 134 s~a~~~al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~~~n~ 206 (427)
T 2w8t_A 134 YMANLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRH-------NSVEDLDKRLGRLPKEPAKLVVLEGVYSM 206 (427)
T ss_dssp HHHHHHHHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESEETT
T ss_pred HHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeCC-------CCHHHHHHHHHhccCCCCeEEEEcCCCCC
Confidence 77888899999999999999999999999999999999998873 489999998875 7899999999999
Q ss_pred ccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCcccc-CCCCCCceEEEeccChhcccccceeeEEEcCHH
Q 014172 241 TGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS-LPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH 319 (429)
Q Consensus 241 tG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~-~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~ 319 (429)
||.+++ +++|.++|++| |+++|+||+|..+.++.... .+.. +.-..+.++++.||||.+|++| ||++++++
T Consensus 207 tG~~~~---l~~l~~l~~~~-g~~li~Dea~~~~~~~~~g~-~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~~~ 278 (427)
T 2w8t_A 207 LGDIAP---LKEMVAVAKKH-GAMVLVDEAHSMGFFGPNGR-GVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSNHP 278 (427)
T ss_dssp TTEECC---HHHHHHHHHHT-TCEEEEECTTTTTTSSTTSC-CHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEECCT
T ss_pred CCCccC---HHHHHHHHHHc-CCEEEEECCccccccCCCCC-chHhhcCCCcCCcEEEecchhhhccCC---CEEEeCHH
Confidence 999999 99999999999 99999999999987753222 2222 2212356899999999999777 99999998
Q ss_pred HHHHHHHHhh--cccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceee-cCCceEEEEEec
Q 014172 320 FVAACNKIQS--QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-EPQGAFYLFIDF 396 (429)
Q Consensus 320 ~~~~l~~~~~--~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~-~p~~~~~~~~~l 396 (429)
+++.+..... .++.+.+...+.++.++|+. .+++++++++++++++++.+.|+++ |+++. ++..+.++|+.+
T Consensus 279 l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~ 353 (427)
T 2w8t_A 279 KFEAVRLACRPYIFTASLPPSVVATATTSIRK----LMTAHEKRERLWSNARALHGGLKAM-GFRLGTETCDSAIVAVML 353 (427)
T ss_dssp TGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHH----HTSCHHHHHHHHHHHHHHHHHHHHH-TCEESCSSCCSSEEEEEE
T ss_pred HHHHHHHhcccccccCCCCHHHHHHHHHHHHH----HhcCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCCCEEEEEE
Confidence 8887765422 23345666666666677775 2235678899999999999999988 88887 451445688988
Q ss_pred CCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 397 STYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.. .+..+++++|+++ ||.+
T Consensus 354 ~~~-----------~~~~~l~~~L~~~-Gi~v 373 (427)
T 2w8t_A 354 EDQ-----------EQAAMMWQALLDG-GLYV 373 (427)
T ss_dssp SSH-----------HHHHHHHHHHHHT-TEEC
T ss_pred CCH-----------HHHHHHHHHHHHC-CeEE
Confidence 742 2477899999887 9976
No 94
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=100.00 E-value=1.5e-32 Score=272.66 Aligned_cols=298 Identities=15% Similarity=0.149 Sum_probs=227.2
Q ss_pred CCCeEEcCCCCC-CCCChHHHHHHHHHHHHc-CC------CCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChH
Q 014172 94 GVSVIRLAAGEP-DFDTPVLIAEAGINAIRE-GF------TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAK 165 (429)
Q Consensus 94 g~~~i~L~~g~~-~~~~p~~v~~a~~~~~~~-~~------~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~ 165 (429)
|++++++..|++ +++.++.+.+++.+.+.+ +. ..|+...+..++|+++++++. .+++|++|+|++
T Consensus 45 g~~~i~~~~~~~~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-------~~~~i~~~sG~~ 117 (401)
T 2bwn_A 45 KQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQ-------KEAALVFSSAYN 117 (401)
T ss_dssp EEEEEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTT-------CSEEEEESCHHH
T ss_pred CCcEEEeeCCCcccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhC-------CCcEEEECCcHH
Confidence 456789988775 565667899999998865 21 234444567889999988863 257888888877
Q ss_pred HHHHHHHHHhc--CCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc----cCCcEEEEcCCCC
Q 014172 166 QSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSN 239 (429)
Q Consensus 166 ~al~~~l~~l~--~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~----~~~~~i~l~~p~N 239 (429)
++..++..++ .+||.|+++.|+|+++...++..|++++.++.+ |++.+++.++ +++++|++++|+|
T Consensus 118 -a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~le~~l~~~~~~~~~~v~~~~~~n 189 (401)
T 2bwn_A 118 -ANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-------DVAHLRELIAADDPAAPKLIAFESVYS 189 (401)
T ss_dssp -HHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-------CHHHHHHHHHHSCTTSCEEEEEESBCT
T ss_pred -HHHHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCC-------CHHHHHHHHHhhccCCceEEEEecCcC
Confidence 6666666553 589999999999999999999999999999863 6888888776 5789999999999
Q ss_pred CccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHH
Q 014172 240 PTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH 319 (429)
Q Consensus 240 PtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~ 319 (429)
|||.+++ +++|.++|++| |+++|+||+|....|+...........-....+++++||||.++++| ||++++++
T Consensus 190 ptG~~~~---l~~i~~l~~~~-~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~~~ 262 (401)
T 2bwn_A 190 MDGDFGP---IKEICDIAEEF-GALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAASAR 262 (401)
T ss_dssp TTCCBCC---HHHHHHHHHHH-TCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEECHH
T ss_pred CCCCcCC---HHHHHHHHHHc-CCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEecCHH
Confidence 9999999 89999999999 99999999999665643222111111111234689999999999888 99999999
Q ss_pred HHHHHHHHhhc--ccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecC
Q 014172 320 FVAACNKIQSQ--FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFS 397 (429)
Q Consensus 320 ~~~~l~~~~~~--~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~ 397 (429)
+++.+...... +..+.+.+.+.++.++++.. ....+++++++++++++++.+.|+++ |+++..+.++ ++|+.++
T Consensus 263 ~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~-~~~~~~~ 338 (401)
T 2bwn_A 263 MVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFL--KTAEGQKLRDAQQMHAKVLKMRLKAL-GMPIIDHGSH-IVPVVIG 338 (401)
T ss_dssp HHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHH--TSHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCCCSSS-CEEEECC
T ss_pred HHHHHHHhCcCceecCCCCHHHHHHHHHHHHHH--HhcccHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCC-eEEEEeC
Confidence 98887754322 23334557787777777641 12235788899999999999999988 8888877777 5888886
Q ss_pred CccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 398 TYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.. .+..+++++|++++||.+
T Consensus 339 ~~-----------~~~~~~~~~L~~~~gi~v 358 (401)
T 2bwn_A 339 DP-----------VHTKAVSDMLLSDYGVYV 358 (401)
T ss_dssp CH-----------HHHHHHHHHHHHHHCEEC
T ss_pred Ch-----------HHHHHHHHHHHhcCCEEE
Confidence 42 156789999986669986
No 95
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=100.00 E-value=6e-32 Score=268.28 Aligned_cols=293 Identities=17% Similarity=0.201 Sum_probs=228.0
Q ss_pred cCCCeEEcCCCCCCCC--ChHHHHHHHHHHHHc-CCC----CCC--CCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecC
Q 014172 93 AGVSVIRLAAGEPDFD--TPVLIAEAGINAIRE-GFT----RYT--PNAGTLELRSAICHKLKEENGLSYTPDQILVSNG 163 (429)
Q Consensus 93 ~g~~~i~L~~g~~~~~--~p~~v~~a~~~~~~~-~~~----~Y~--~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G 163 (429)
.|+++|+|+.|.| ++ +|+.+.+++.+.+.. +.. .|. ...+..++++++++++ |. + +.|++++|
T Consensus 43 ~g~~~id~~~~~~-~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~--~-~~i~~~sG 114 (401)
T 1fc4_A 43 DGSHVINFCANNY-LGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL----GM--E-DAILYSSC 114 (401)
T ss_dssp TSCEEEECCCSCT-TSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH----TC--S-EEEEESCH
T ss_pred CCccEEEeeccCc-ccccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHh----CC--C-cEEEeCCh
Confidence 4678999999965 54 478999999988765 211 221 1345678888888887 42 3 55655555
Q ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------CCcEEEEcCC
Q 014172 164 AKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSP 237 (429)
Q Consensus 164 ~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~~~~i~l~~p 237 (429)
++++..++++++++||.|+++.|+|..+...++..|++++.++. .|++++++.+++ ++++|++++|
T Consensus 115 -s~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~~ 186 (401)
T 1fc4_A 115 -FDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARHVLIATDGV 186 (401)
T ss_dssp -HHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSEEEEEESE
T ss_pred -HHHHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEECC-------CCHHHHHHHHHHhhccCCCceEEEEeCC
Confidence 66888899999999999999999999988899999999999873 488999988865 7899999999
Q ss_pred CCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCc-cccc-CCCCCCccccCCCCCCceEEEeccChhc-ccccceeeEE
Q 014172 238 SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE-HIIY-APATHTSFASLPGMWERTLTVNGFSKAF-AMTGWRLGYI 314 (429)
Q Consensus 238 ~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~-~~~~-~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~R~G~v 314 (429)
+||||.+++ +++|.++|++| |+++|+||+|+ ++.+ .+....+...+. .+.+++++||||.+ +++| ||+
T Consensus 187 ~nptG~~~~---~~~i~~l~~~~-~~~li~De~~~~g~~~~~g~~~~~~~~~~--~~~di~~~s~sK~~~~~~g---G~~ 257 (401)
T 1fc4_A 187 FSMDGVIAN---LKGVCDLADKY-DALVMVDDSHAVGFVGENGRGSHEYCDVM--GRVDIITGTLGKALGGASG---GYT 257 (401)
T ss_dssp ETTTTEECC---HHHHHHHHHHT-TEEEEEECTTTTTTSSTTSCCHHHHTTCT--TCCSEEEEESSSTTCSSSC---EEE
T ss_pred cCCCCCCCC---HHHHHHHHHHc-CCEEEEECcccccccCCCCCccHHHcCCC--cCCcEEEecchhhccCCCC---EEE
Confidence 999999999 99999999999 99999999996 6653 332222222222 25679999999999 6554 999
Q ss_pred EcCHHHHHHHHHHhhc--ccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEE
Q 014172 315 AGPKHFVAACNKIQSQ--FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYL 392 (429)
Q Consensus 315 ~~~~~~~~~l~~~~~~--~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~ 392 (429)
++++++++.+...... ++.+.+.+.+.++.++|+. .+..++.+++++++++++.+.|+++ |+++. +..++|+
T Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~ 331 (401)
T 1fc4_A 258 AARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEM----VEAGSELRDRLWANARQFREQMSAA-GFTLA-GADHAII 331 (401)
T ss_dssp EECHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHH----HHTCHHHHHHHHHHHHHHHHHHHHT-TCCBC-CSSSSEE
T ss_pred EcCHHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHH----HhcCHHHHHHHHHHHHHHHHHHHHc-CCccc-CCCCCEE
Confidence 9999999988775422 2557889999999888875 2224678889999999999999998 88877 5566678
Q ss_pred EEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 393 FIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 393 ~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|++++.. .+..+++++|+++ ||.+
T Consensus 332 ~~~~~~~-----------~~~~~l~~~l~~~-gi~v 355 (401)
T 1fc4_A 332 PVMLGDA-----------VVAQKFARELQKE-GIYV 355 (401)
T ss_dssp EEEEECH-----------HHHHHHHHHHHHT-TEEC
T ss_pred EEEcCCh-----------HHHHHHHHHHHHC-CcEE
Confidence 9998642 1577899998876 9976
No 96
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=100.00 E-value=1.2e-31 Score=265.08 Aligned_cols=286 Identities=18% Similarity=0.249 Sum_probs=219.1
Q ss_pred CCCCCCCC-h---HHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh-c
Q 014172 102 AGEPDFDT-P---VLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-C 176 (429)
Q Consensus 102 ~g~~~~~~-p---~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l-~ 176 (429)
.++|+|++ | +++.+++.+.+.++...|.+..+..++|++++++++ .++.|++++| ++++.+++.++ +
T Consensus 4 ~~~p~f~~~p~~~~~~~~a~~~~l~~~~~~~~~~~~~~~l~~~la~~~~-------~~~~i~~~sG-t~al~~~l~~l~~ 75 (388)
T 1b9h_A 4 RKAPEFPAWPQYDDAERNGLVRALEQGQWWRMGGDEVNSFEREFAAHHG-------AAHALAVTNG-THALELALQVMGV 75 (388)
T ss_dssp -CCCCCCCSSCCCHHHHHHHHHHHHTSCCBTTTCSHHHHHHHHHHHHTT-------CSEEEEESCH-HHHHHHHHHHTTC
T ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHcCCeeecCCHHHHHHHHHHHHHhC-------CCeEEEeCCH-HHHHHHHHHHcCC
Confidence 45788887 7 899999999988754567777788999999999974 2256777766 89999999999 8
Q ss_pred CCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHH
Q 014172 177 SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARI 256 (429)
Q Consensus 177 ~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~ 256 (429)
++||+|+++.|+|.++...++..|++++.++++++ ++.+|++.|++++++++++|+ |+||||.+.+ +++|.++
T Consensus 76 ~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~---l~~i~~l 148 (388)
T 1b9h_A 76 GPGTEVIVPAFTFISSSQAAQRLGAVTVPVDVDAA-TYNLDPEAVAAAVTPRTKVIM---PVHMAGLMAD---MDALAKI 148 (388)
T ss_dssp CTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTT-TCCBCHHHHHHHCCTTEEEEC---CBCGGGCCCC---HHHHHHH
T ss_pred CCcCEEEECCCccHHHHHHHHHcCCEEEEEecCCC-cCCCCHHHHHHhcCcCceEEE---EeCCccCcCC---HHHHHHH
Confidence 99999999999999999999999999999998753 477999999999988888776 9999999998 8999999
Q ss_pred HHhCCCeEEEEccCCccc-ccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHH-H--HHHHHHHhhc--
Q 014172 257 VAKHPRLLVLSDEIYEHI-IYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-F--VAACNKIQSQ-- 330 (429)
Q Consensus 257 a~~~~~i~vi~Deay~~~-~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~-~--~~~l~~~~~~-- 330 (429)
|++| |++||+|++|..+ .+.+. .+..+ + ++.+.||||..+++|.|+||++++++ + ++.+......
T Consensus 149 a~~~-~~~li~D~a~~~g~~~~~~---~~~~~----~-~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~ 219 (388)
T 1b9h_A 149 SADT-GVPLLQDAAHAHGARWQGK---RVGEL----D-SIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGR 219 (388)
T ss_dssp HHHH-TCCBCEECTTCTTCEETTE---EGGGS----S-SCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTC
T ss_pred HHHc-CCEEEEecchhcCCccCCe---ecccc----c-ceEEEEccCCCcccCCCeEEEEECCHHHHHHHHHHHHHhCCC
Confidence 9999 9999999999863 33321 12222 1 58899999877777889999998876 5 5555443221
Q ss_pred -------------ccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeec------CCceEE
Q 014172 331 -------------FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE------PQGAFY 391 (429)
Q Consensus 331 -------------~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~------p~~~~~ 391 (429)
.+...+.+...++... .+++++..++++++++++.+.|++++|+++.. +.++++
T Consensus 220 ~~~~~~~~~~~~g~~~~~~~~~~a~~~~~-------~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 292 (388)
T 1b9h_A 220 PRDDRRYFHKIAGSNMRLNEFSASVLRAQ-------LARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYM 292 (388)
T ss_dssp CTTCSSCCCCSCCCBCBCBHHHHHHHHHH-------HTTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSE
T ss_pred CccCccceeecccccCCcCHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEE
Confidence 0011233322222222 34466788888999999999999988888765 456788
Q ss_pred EEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 392 LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 392 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+|+.++...+ .+..++.++|.++ ||.+
T Consensus 293 ~~~~~~~~~~---------~~~~~l~~~L~~~-gI~v 319 (388)
T 1b9h_A 293 AMFRIPGLTE---------ERRNALVDRLVEA-GLPA 319 (388)
T ss_dssp EEEECTTCCH---------HHHHHHHHHHHHT-TCCE
T ss_pred EEEEeCCcCc---------ccHHHHHHHHHHC-CCCc
Confidence 9999974200 1467899988865 8876
No 97
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=100.00 E-value=3.1e-32 Score=275.26 Aligned_cols=326 Identities=12% Similarity=0.137 Sum_probs=230.1
Q ss_pred cccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCC--CC-------CChHHHHHHHHHHHHcCCCCCCCCCCCHHHHH
Q 014172 69 SPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP--DF-------DTPVLIAEAGINAIREGFTRYTPNAGTLELRS 139 (429)
Q Consensus 69 s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~--~~-------~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~ 139 (429)
..|++.++++.+..+..+++.+...|.++++|..|++ ++ +.++.+.+++. .+...|++..+..+|++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~ylD~~~~~~~~~~~~~~~~a~~----~~~~~y~~~~~~~~l~~ 82 (456)
T 2ez2_A 7 PFRIKSVETVSMIPRDERLKKMQEAGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMM----MGDEAYAGSENFYHLER 82 (456)
T ss_dssp SSCCCCCCCCCCCCHHHHHHHHHHTTTCGGGSCGGGCSEECSCSSSCCCCCHHHHHHHT----TCCCCSSSCHHHHHHHH
T ss_pred CeeeeeecccCCCCHHHHHHHHHHCCCCcccCCcccceeeeccccCCccCCHHHHHHhh----cchhhcccChhHHHHHH
Confidence 3567777777766666677777777777777777765 44 22355555443 44557888888899999
Q ss_pred HHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCC-CChHHHHHHcCCEEEEecCCCC----C--
Q 014172 140 AICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFW-VSYPEMARIADATPVILPTRIS----E-- 212 (429)
Q Consensus 140 ~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y-~~~~~~~~~~g~~~~~v~~~~~----~-- 212 (429)
++++++. .+++++|+|+++++..++++++++|| +++.|+| ..+...+...|++++.++++.+ +
T Consensus 83 ~la~~~~--------~~~~~~~~~gt~a~~~al~~l~~~gd--i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~ 152 (456)
T 2ez2_A 83 TVQELFG--------FKHIVPTHQGRGAENLLSQLAIKPGQ--YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNI 152 (456)
T ss_dssp HHHHHHC--------CSEEEEESSHHHHHHHHHHHHCCTTC--EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCC
T ss_pred HHHHHhC--------CCcEEEeCCcHHHHHHHHHHhCCCCC--EeccccccchhHHHHHHcCCEEEEecccccccccccc
Confidence 9999973 34899999999999999999999999 7889999 7778899999999999998632 2
Q ss_pred --CCCCCHHHHHhhcccCC----cEEEEcCCCC-CccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcc----------cc
Q 014172 213 --NFLLDPKVLESKLTEKS----RLLILCSPSN-PTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH----------II 275 (429)
Q Consensus 213 --~~~~d~e~l~~~l~~~~----~~i~l~~p~N-PtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~----------~~ 275 (429)
++.+|+++|++++++++ ++|++++|+| |||.+++.+++++|+++|++| |+++|+||+|.. +.
T Consensus 153 ~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~-~i~li~De~~~~g~~~~~~~~~~~ 231 (456)
T 2ez2_A 153 AFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAH-GIKVFYDATRCVENAYFIKEQEQG 231 (456)
T ss_dssp SCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHT-TCCEEEECTTHHHHHHHHHHHSTT
T ss_pred cccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHc-CCeEEEEccccccccccccccccc
Confidence 36789999999997655 8899999999 999999999999999999999 999999999986 34
Q ss_pred cCCCCCCccc-cCCCCCCceEEEeccChhcccccceeeEEEc-CHHHHHHHHHHhhcc-----cCCCchHHHHH-HHHHH
Q 014172 276 YAPATHTSFA-SLPGMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQF-----TSGASSISQKA-GVAAL 347 (429)
Q Consensus 276 ~~~~~~~~~~-~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~-~~~~~~~l~~~~~~~-----~~~~~~~~q~a-a~~~l 347 (429)
|.+....++. .+.. ...++++ |++|.++ +| |.||+++ ++++++.+....... ..+.+.....+ +.+.+
T Consensus 232 ~~g~~~~~~~~~~~~-~~d~~~~-S~kk~~~-~~-~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~ 307 (456)
T 2ez2_A 232 FENKSIAEIVHEMFS-YADGCTM-SGKKDCL-VN-IGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLR 307 (456)
T ss_dssp CTTSCHHHHHHHHHT-TCSEEEE-ETTTTTC-CS-SCEEEEESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHH
T ss_pred cCCcchhhhhhhhcc-cCCEEEE-eCcccCC-CC-ceeEEEECCHHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHH
Confidence 5442111110 0111 1234444 7888765 67 7899998 688888877654321 11223223222 33333
Q ss_pred hcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHH-----HHHHHH
Q 014172 348 GLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESL-----CRYLLD 422 (429)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~Ll~ 422 (429)
+. .+ +...++.+++.+++.+.|++. |+++..|.+++|+|++++.... + .+..++ +++|++
T Consensus 308 ~~---~~---~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~~~~~~~~~~~~~~~----~----~~~~~~~~~~l~~~L~~ 372 (456)
T 2ez2_A 308 EA---MQ---YEYIEHRVKQVRYLGDKLKAA-GVPIVEPVGGHAVFLDARRFCE----H----LTQDEFPAQSLAASIYV 372 (456)
T ss_dssp HH---TC---HHHHHHHHHHHHHHHHHHHHT-TCCBCSSCCSSEEEEEHHHHTT----T----SCGGGCHHHHHHHHHHH
T ss_pred HH---hH---HHHHHHHHHHHHHHHHHHhcC-CCccccCCCceEEEEEhHHhcC----C----CChhhccHHHHHHHHHH
Confidence 22 11 234444555667788888776 8888788899999998742100 0 133344 777766
Q ss_pred hCCeec
Q 014172 423 KAQVLL 428 (429)
Q Consensus 423 ~~gV~v 428 (429)
++||.+
T Consensus 373 ~~gv~~ 378 (456)
T 2ez2_A 373 ETGVRS 378 (456)
T ss_dssp HHSEEC
T ss_pred hcCeee
Confidence 668864
No 98
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=100.00 E-value=9.8e-32 Score=267.76 Aligned_cols=295 Identities=18% Similarity=0.152 Sum_probs=223.7
Q ss_pred cCCCeEEcCCCC-CCCCChHHHHHHHHHHHHcC---CCCCCCCCC----CHHHHHHHHHHHHhhcCCCCCCCcEEEecCh
Q 014172 93 AGVSVIRLAAGE-PDFDTPVLIAEAGINAIREG---FTRYTPNAG----TLELRSAICHKLKEENGLSYTPDQILVSNGA 164 (429)
Q Consensus 93 ~g~~~i~L~~g~-~~~~~p~~v~~a~~~~~~~~---~~~Y~~~~G----~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~ 164 (429)
.|+.+|+|+.++ .+++.++.+.+++.+.+.+. ...|....| ..++++++++++ |. +..++++++
T Consensus 57 ~g~~~ld~~s~~~l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~----~~~i~~~sG 128 (409)
T 3kki_A 57 ASPDDIILQSNDYLALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFT----GF----DECLLSQSG 128 (409)
T ss_dssp CCTTSEECCCSCTTCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHH----TC----SEEEEESCH
T ss_pred CCCceEEeeccCccCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHh----CC----CeEEEecch
Confidence 356789998886 34666899999999998762 122222223 456666666665 42 234555666
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-CCcEEEEcCCCCCccC
Q 014172 165 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGS 243 (429)
Q Consensus 165 ~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~p~NPtG~ 243 (429)
++++..++++++++||.|+++.|+|.++...++..|++++.++. .|+++|++++++ ++++|++++|+||||.
T Consensus 129 t~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~vi~~~~~nptG~ 201 (409)
T 3kki_A 129 WNANVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMH-------NNCDHLRMLIQRHGPGIIVVDSIYSTLGT 201 (409)
T ss_dssp HHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECT-------TCHHHHHHHHHHHCSCEEEEESBCTTTCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCCCCC
Confidence 79999999999999999999999999999999999999998874 489999999975 5899999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHH
Q 014172 244 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA 323 (429)
Q Consensus 244 ~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~ 323 (429)
+++ +++|.++|++| |++||+||+|..+.++..............+.++++.||||.++++| ||+++++++++.
T Consensus 202 ~~~---l~~l~~la~~~-~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~g---g~v~~~~~~~~~ 274 (409)
T 3kki_A 202 IAP---LAELVNISKEF-GCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYRA---GAIWCNNEVNRC 274 (409)
T ss_dssp BCC---HHHHHHHHHHH-TCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEESSSGGGT
T ss_pred cCC---HHHHHHHHHHc-CCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCCc---eEEEECHHHHHH
Confidence 999 99999999999 99999999999866543222222112212345699999999999664 999999988887
Q ss_pred HHHHhhc--ccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccC
Q 014172 324 CNKIQSQ--FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG 401 (429)
Q Consensus 324 l~~~~~~--~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~ 401 (429)
+...... +....+...+.++.++++. .+..+++++.++++++++.+.|+++ |+++. ..++++|+.++..
T Consensus 275 ~~~~~~~~~~~~~~~~~~~aa~~aal~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~~~-- 345 (409)
T 3kki_A 275 VPFISYPAIFSSTLLPYEAAGLETTLEI----IESADNRRQHLDRMARKLRIGLSQL-GLTIR--SESQIIGLETGDE-- 345 (409)
T ss_dssp HHHHCHHHHHSBCCCHHHHHHHHHHHHH----HHHCHHHHHHHHHHHHHHHHHHHTT-TCCCC--CSSSEEEEEEESH--
T ss_pred HHHhCcCccccCCCcHHHHHHHHHHHHH----HhcCHHHHHHHHHHHHHHHHHHHHc-CCccC--CCCCEEEEEeCCH--
Confidence 7764332 2334566677777777775 2233678889999999999999998 77765 3566788888643
Q ss_pred CcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 402 SEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+..+++++|+++ ||.+
T Consensus 346 ---------~~~~~~~~~L~~~-Gv~v 362 (409)
T 3kki_A 346 ---------RNTEKVRDYLESN-GVFG 362 (409)
T ss_dssp ---------HHHHHHHHHHHHT-TEEC
T ss_pred ---------HHHHHHHHHHHHC-CceE
Confidence 2467899999887 9876
No 99
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=100.00 E-value=1.4e-30 Score=260.79 Aligned_cols=290 Identities=15% Similarity=0.152 Sum_probs=223.3
Q ss_pred EcCCCCCCCCChHHHHHHHHHHHHcCCCCCCC-CCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcC
Q 014172 99 RLAAGEPDFDTPVLIAEAGINAIREGFTRYTP-NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS 177 (429)
Q Consensus 99 ~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~-~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~ 177 (429)
+|+.|+|++++|+.+.+++.+.+..+ .|++ ..+..+||+++++++. .++|++|+|+++++.+++.++.
T Consensus 20 ~l~~~~p~~~~p~~~~~a~~~~~~~~--~y~~~~~~~~~l~~~la~~~~--------~~~v~~~~ggt~al~~~l~~l~- 88 (424)
T 2po3_A 20 PLLVGRPNRIDRARLYERLDRALDSQ--WLSNGGPLVREFEERVAGLAG--------VRHAVATCNATAGLQLLAHAAG- 88 (424)
T ss_dssp CEETTCCCCCCHHHHHHHHHHHHHHT--CCSSSCHHHHHHHHHHHHHHT--------SSEEEEESCHHHHHHHHHHHHT-
T ss_pred cccccCCCCCChHHHHHHHHHHHhcC--CcccCCHHHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHcC-
Confidence 68999999999999999999988764 5766 6788999999999974 2589999999999999999985
Q ss_pred CCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHH
Q 014172 178 PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIV 257 (429)
Q Consensus 178 ~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a 257 (429)
+||+|++++|+|.++...++..|++++.+++++ +++.+|+++|++.+++++++|+++ ||||...+ +++|.++|
T Consensus 89 ~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~---~~tG~~~~---l~~i~~la 161 (424)
T 2po3_A 89 LTGEVIMPSMTFAATPHALRWIGLTPVFADIDP-DTGNLDPDQVAAAVTPRTSAVVGV---HLWGRPCA---ADQLRKVA 161 (424)
T ss_dssp CCSEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTSSBCHHHHGGGCCTTEEEEEEE---CGGGCCCC---HHHHHHHH
T ss_pred CCCEEEECCCccHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhhCcCCcEEEEE---CCCCCcCC---HHHHHHHH
Confidence 789999999999999999999999999999875 457799999999998889999875 48999877 99999999
Q ss_pred HhCCCeEEEEccCCc-ccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcC-HHHHHHHHHHhhcccCC-
Q 014172 258 AKHPRLLVLSDEIYE-HIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQFTSG- 334 (429)
Q Consensus 258 ~~~~~i~vi~Deay~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~-~~~~~~l~~~~~~~~~~- 334 (429)
++| |++||+||+|. ++.+++. ++..+ .+ +++.||||..+++|+|+||++++ +++++.+.........+
T Consensus 162 ~~~-~~~li~Dea~~~g~~~~~~---~~~~~---~d--i~~~S~sk~K~l~~~~~G~~v~~~~~l~~~l~~~~~~~~~~~ 232 (424)
T 2po3_A 162 DEH-GLRLYFDAAHALGCAVDGR---PAGSL---GD--AEVFSFHATKAVNAFEGGAVVTDDADLAARIRALHNFGFDLP 232 (424)
T ss_dssp HHT-TCEEEEECTTCTTCEETTE---ETTSS---SS--EEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTTTCT
T ss_pred HHc-CCEEEEECccccCCeECCe---ecccc---cC--EEEEeCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhcCcccc
Confidence 999 99999999999 4656542 22222 12 89999997667778999999998 88988887664432111
Q ss_pred --------CchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeec-CCce---EE-EEEecCCccC
Q 014172 335 --------ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-PQGA---FY-LFIDFSTYYG 401 (429)
Q Consensus 335 --------~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~-p~~~---~~-~~~~l~~~~~ 401 (429)
...+.+.++..++.. .++++...++.+++++++.+.|++++|+++.. |+++ ++ +++.++...
T Consensus 233 ~~~~~~g~~~~~~~~~aa~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~- 307 (424)
T 2po3_A 233 GGSPAGGTNAKMSEAAAAMGLTS----LDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEIDEAT- 307 (424)
T ss_dssp TCCTTCCCBCCCCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEECHHH-
T ss_pred ccccccCcCCCcCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEECCcc-
Confidence 001122333333332 34567777888888899999999888888875 4443 33 336776300
Q ss_pred CcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 402 SEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+ .+..++.+.|.+ .||.+
T Consensus 308 ---~~----~~~~~l~~~L~~-~gI~v 326 (424)
T 2po3_A 308 ---TG----IHRDLVMEVLKA-EGVHT 326 (424)
T ss_dssp ---HS----SCHHHHHHHHHH-TTEEC
T ss_pred ---ch----hhHHHHHHHHHH-CCCce
Confidence 00 267788887755 59876
No 100
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.98 E-value=2.6e-31 Score=263.97 Aligned_cols=296 Identities=15% Similarity=0.044 Sum_probs=223.0
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCC----CCCC----CCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGF----TRYT----PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~----~~Y~----~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~a 167 (429)
+.+.|+.+.+. ++|+.+.+++.+.+.... ..|. ...+..++++++++++ | .++++|++|+|++++
T Consensus 26 ~~~~ld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~~v~~~~g~t~a 98 (406)
T 3cai_A 26 GWVHFDAPAGM-LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLV----N--ADPGGVVLGADRAVL 98 (406)
T ss_dssp SCEECBGGGCC-CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHH----T--CCGGGEEEESCHHHH
T ss_pred CeEEEeCCCcC-CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHh----C--CCCCeEEEeCChHHH
Confidence 37899988877 668899999999886532 1232 1234456777777765 4 356899999999999
Q ss_pred HHHHHHHh---cCCCCEEEEcCCCCCChHHHHHH----cCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCC
Q 014172 168 ILQAVLAV---CSPGDEVIIPAPFWVSYPEMARI----ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNP 240 (429)
Q Consensus 168 l~~~l~~l---~~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NP 240 (429)
+.+++.++ +++||+|+++.|+|.++...+.. .|++++.++++++ ++.+|+++|++.+++++++|++++|+||
T Consensus 99 l~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~~~~~~np 177 (406)
T 3cai_A 99 LSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIE-TGELPTWQWESLISKSTRLVAVNSASGT 177 (406)
T ss_dssp HHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTT-TCCCCGGGHHHHCCTTEEEEEEESBCTT
T ss_pred HHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcc-cCCcCHHHHHHHhCCCceEEEEeCCcCC
Confidence 99999887 78999999999999987655443 7999999998743 4568999999999989999999999999
Q ss_pred ccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceee-EEEcCHH
Q 014172 241 TGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLG-YIAGPKH 319 (429)
Q Consensus 241 tG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G-~v~~~~~ 319 (429)
||.+++ +++|.++|++| |++||+|++|.. +.....+.. .+.++++.|+||.+| ++ +| |++++++
T Consensus 178 tG~~~~---l~~i~~l~~~~-~~~li~D~a~~~----g~~~~~~~~----~~~d~~~~s~~K~~g-~~--~G~~~~~~~~ 242 (406)
T 3cai_A 178 LGGVTD---LRAMTKLVHDV-GALVVVDHSAAA----PYRLLDIRE----TDADVVTVNAHAWGG-PP--IGAMVFRDPS 242 (406)
T ss_dssp TCBBCC---CHHHHHHHHHT-TCEEEEECTTTT----TTCCCCHHH----HCCSEEEEEGGGGTS-CS--CEEEEESCHH
T ss_pred ccccCC---HHHHHHHHHHc-CCEEEEEccccc----CCCCCCchh----cCCCEEEeehhhhcC-CC--cCeEEEEehH
Confidence 999999 88999999999 999999999974 221122222 245689999999886 54 89 9999998
Q ss_pred HHHHHHHHhh---------cccCCCchHHHHHHHHHHhcCCC-C-----------hHHHHHHHHHHHHHHHHHHHHhccC
Q 014172 320 FVAACNKIQS---------QFTSGASSISQKAGVAALGLGYA-G-----------GEVVSKMVKAFRERRDFLVKSFGEL 378 (429)
Q Consensus 320 ~~~~l~~~~~---------~~~~~~~~~~q~aa~~~l~~~~~-~-----------~~~~~~~~~~~~~~r~~l~~~L~~l 378 (429)
+++.+..... ....+++...+.++.++++.... + .+++++++++++++++++.+.|+++
T Consensus 243 ~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 322 (406)
T 3cai_A 243 VMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSL 322 (406)
T ss_dssp HHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcC
Confidence 8776654321 11233455555555555543100 0 0157888999999999999999998
Q ss_pred CCceeecCC---ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 379 EGVKMSEPQ---GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 379 ~g~~~~~p~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+|+++..+. ++ ++++.+++. +..+++++|.+ .||.+
T Consensus 323 ~~~~~~~~~~~~~~-~~~~~~~~~------------~~~~~~~~L~~-~gi~v 361 (406)
T 3cai_A 323 PLVMLIGRPEAQIP-VVSFAVHKV------------PADRVVQRLAD-NGILA 361 (406)
T ss_dssp TTEEECCCCSSBCS-EEEEEETTB------------CHHHHHHHHHH-TTEEC
T ss_pred CCeEEcCCccccCC-EEEEEECCc------------CHHHHHHHHHH-CCcEE
Confidence 888887664 55 578888642 67889998865 49876
No 101
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.98 E-value=2e-31 Score=259.91 Aligned_cols=297 Identities=13% Similarity=0.063 Sum_probs=227.6
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 174 (429)
+.+|+|+.+.+. ++|+.+.+++.+.+. +|.+..|..++++++++++.+.+| .++++|++|+|+++++..++++
T Consensus 13 p~~i~l~~~~~~-~~~~~v~~a~~~~~~----~~~~~~g~~~~~~~~~~~l~~~~g--~~~~~v~~~~g~t~a~~~~~~~ 85 (359)
T 1svv_A 13 PKPYSFVNDYSV-GMHPKILDLMARDNM----TQHAGYGQDSHCAKAARLIGELLE--RPDADVHFISGGTQTNLIACSL 85 (359)
T ss_dssp --CEECSCSCSS-CCCHHHHHHHHHHTT----CCCCSTTCSHHHHHHHHHHHHHHT--CTTSEEEEESCHHHHHHHHHHH
T ss_pred CeeEEecCCCcC-CCCHHHHHHHHHHHh----hccccccccHHHHHHHHHHHHHhC--CCCccEEEeCCchHHHHHHHHH
Confidence 458999998776 678899999988764 466677889999999999999888 4678999999999999999999
Q ss_pred hcCCCCEEEEcCCCCCChHH--HHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccC-------CcEEEEcCCCCCccCCC
Q 014172 175 VCSPGDEVIIPAPFWVSYPE--MARIADATPVILPTRISENFLLDPKVLESKLTEK-------SRLLILCSPSNPTGSVY 245 (429)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~-------~~~i~l~~p~NPtG~~~ 245 (429)
++++||+|++++|+|+++.. .++..|++++.+|.+ ++.+|+++|++.++++ +++|++++| ||||.++
T Consensus 86 ~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~ 161 (359)
T 1svv_A 86 ALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQY 161 (359)
T ss_dssp HCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCC
T ss_pred HhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceec
Confidence 99999999999999999887 588899999999974 5679999999999765 899999999 7999999
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHH
Q 014172 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN 325 (429)
Q Consensus 246 ~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~ 325 (429)
+.+++++|.++|++| |+++|+||+|..+.++... .....+.-.....+++.|++|..+ ..++|++++++++++.+.
T Consensus 162 ~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~-~~~~~~~~~~~~d~~~~s~~K~g~--~~~~g~l~~~~~~~~~~~ 237 (359)
T 1svv_A 162 TKQELEDISASCKEH-GLYLFLDGARLASALSSPV-NDLTLADIARLTDMFYIGATKAGG--MFGEALIILNDALKPNAR 237 (359)
T ss_dssp CHHHHHHHHHHHHHH-TCEEEEECTTHHHHHTSTT-CCCCHHHHHHHCSEEEEECTTTTC--SSCEEEEECSGGGCTTHH
T ss_pred CHHHHHHHHHHHHHh-CCEEEEEccchhhhhcCCC-cchhhhhhhhcCCEEEEecccCCC--CCceEEEEEcccHHHHHH
Confidence 999999999999999 9999999999554332111 111100000122377889999744 355799999998877776
Q ss_pred HHhh--cccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCc
Q 014172 326 KIQS--QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSE 403 (429)
Q Consensus 326 ~~~~--~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~ 403 (429)
.... ......+......+..++. +..+++++++++++++++.+.| +.+|+++..|.+++|+|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~~~~~~~------ 305 (359)
T 1svv_A 238 HLIKQRGALMAKGWLLGIQFEVLMK-----DNLFFELGAHSNKMAAILKAGL-EACGIRLAWPSASNQLFPILE------ 305 (359)
T ss_dssp HHHHHTTCCCTTTHHHHHHHHHHTS-----TTHHHHHHHHHHHHHHHHHHHH-HHTTCCBSSCCSSSEECBEEE------
T ss_pred HHHhcCCcccccchhhHHHHHHHHh-----hhhHHHHHHHHHHHHHHHHHHh-ccCCeEEccCCccceEEEEcC------
Confidence 5421 1111112222222333443 2346788899999999999999 566898888889999998764
Q ss_pred ccCCCCCCChHHHHHHHHHhCCeec
Q 014172 404 AEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 404 ~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+++++|++++||.+
T Consensus 306 ----------~~~~~~l~~~~gi~v 320 (359)
T 1svv_A 306 ----------NTMIAELNNDFDMYT 320 (359)
T ss_dssp ----------HHHHHHHTTTEECEE
T ss_pred ----------HHHHHHHHHhcCEEE
Confidence 378888887768764
No 102
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.98 E-value=1.1e-31 Score=265.71 Aligned_cols=291 Identities=14% Similarity=0.135 Sum_probs=223.7
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHcCCCCCCCC--CCCHHHHHHHHHHHHhhcCCCCCCC-cEEEecChHHHHHHHHHHhc
Q 014172 100 LAAGEPDFDTPVLIAEAGINAIREGFTRYTPN--AGTLELRSAICHKLKEENGLSYTPD-QILVSNGAKQSILQAVLAVC 176 (429)
Q Consensus 100 L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~--~G~~~lr~~ia~~l~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~ 176 (429)
+..+.++.++++.+.+++.+.+. ..|++. ....++|++++++++ .+++ +|++|+|+++++..++.+++
T Consensus 20 ~~~~~~p~~~~~~v~~a~~~~~~---~~~~~~~~~~~~~l~~~la~~~~------~~~~~~v~~~~g~t~al~~~~~~~~ 90 (396)
T 2ch1_A 20 IMMGPGPSNCSKRVLTAMTNTVL---SNFHAELFRTMDEVKDGLRYIFQ------TENRATMCVSGSAHAGMEAMLSNLL 90 (396)
T ss_dssp BCCSSSSCCCCHHHHHHTTSCCC---CTTCHHHHHHHHHHHHHHHHHHT------CCCSCEEEESSCHHHHHHHHHHHHC
T ss_pred eeecCCCCCCCHHHHHHhccccc---cCCChhHHHHHHHHHHHHHHHhC------CCCCcEEEECCcHHHHHHHHHHHhc
Confidence 34455566678888887765432 235432 125678888888864 3566 89999999999999999999
Q ss_pred CCCCEEEEcCCCCCChH--HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-CCcEEEEcCCCCCccCCCCHHHHHHH
Q 014172 177 SPGDEVIIPAPFWVSYP--EMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEI 253 (429)
Q Consensus 177 ~~gd~Vlv~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~p~NPtG~~~~~~~l~~I 253 (429)
++||+|++++|+|.++. ..++..|++++.++++. ++.+|+++|++++++ ++++|++++|+||||.+++ +++|
T Consensus 91 ~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i 165 (396)
T 2ch1_A 91 EEGDRVLIAVNGIWAERAVEMSERYGADVRTIEGPP--DRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP---LEGV 165 (396)
T ss_dssp CTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTH
T ss_pred CCCCeEEEEcCCcccHHHHHHHHHcCCceEEecCCC--CCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecC---HHHH
Confidence 99999999999999985 47888999999999863 466899999999987 8999999999999999999 8899
Q ss_pred HHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHh-----
Q 014172 254 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ----- 328 (429)
Q Consensus 254 ~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~----- 328 (429)
.++|++| |++||+||+|.. +.....+.. .+..+++.|++|.++ .+.++||+++++++++.+....
T Consensus 166 ~~l~~~~-~~~li~Dea~~~----g~~~~~~~~----~~~d~~~~s~~K~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~ 235 (396)
T 2ch1_A 166 GQICHQH-DCLLIVDAVASL----CGVPFYMDK----WEIDAVYTGAQKVLG-APPGITPISISPKALDVIRNRRTKSKV 235 (396)
T ss_dssp HHHHHHT-TCEEEEECTTTB----TTBCCCTTT----TTCCEEECCCC-CCC-CCSSCEEEEECHHHHHHHHTCSSCCSC
T ss_pred HHHHHHc-CCEEEEEccccc----cCCccchhh----cCcCEEEEcCCcccc-CCCCeEEEEECHHHHHhhhhccCcccc
Confidence 9999999 999999999983 222222221 234577899999875 4456799999998887765310
Q ss_pred ------------------hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCce-
Q 014172 329 ------------------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGA- 389 (429)
Q Consensus 329 ------------------~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~- 389 (429)
.....+++...|.++.++++.. .++++++++++++++++++.+.|+++ |+++..++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 312 (396)
T 2ch1_A 236 FYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQI--AEEGLENQIKRRIECAQILYEGLGKM-GLDIFVKDPRH 312 (396)
T ss_dssp GGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHH--HHHCHHHHHHHHHHHHHHHHHHHHHH-TCCBSSCSGGG
T ss_pred eEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHC-CCeeccCCccc
Confidence 1122346777888888888741 12457888999999999999999998 8888777663
Q ss_pred ---EEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 390 ---FYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 390 ---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.++++.++.. .+..+++++|++++||.+
T Consensus 313 ~~~~~~~~~~~~~-----------~~~~~~~~~L~~~~gi~v 343 (396)
T 2ch1_A 313 RLPTVTGIMIPKG-----------VDWWKVSQYAMNNFSLEV 343 (396)
T ss_dssp BCTTEEEEECCTT-----------CCHHHHHHHHHHHHCBCC
T ss_pred cCCceEEEEcCCC-----------CCHHHHHHHHHHhCCEEE
Confidence 3688888632 268899999988778875
No 103
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.98 E-value=3.9e-31 Score=260.15 Aligned_cols=291 Identities=14% Similarity=0.114 Sum_probs=214.9
Q ss_pred EEcCCCCCCCCChHHHHHHHHHHHHcCCC----CCCCC----CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 98 IRLAAGEPDFDTPVLIAEAGINAIREGFT----RYTPN----AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 98 i~L~~g~~~~~~p~~v~~a~~~~~~~~~~----~Y~~~----~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
+.|+.+.+. ++|+.+++++.+.+.+... .|... .+..+++++++++ +| .++++|++|+|+++++.
T Consensus 2 ~yld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~----~g--~~~~~v~~~~g~t~a~~ 74 (382)
T 4eb5_A 2 AYFDYTSAK-PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKL----VN--GGGGTVVFTSGATEANN 74 (382)
T ss_dssp CBCBTTTCC-CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHH----HT--CTTEEEEEESSHHHHHH
T ss_pred eeeccCCCC-CCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHH----hC--CCCCeEEEcCchHHHHH
Confidence 345555544 5689999999998864211 13221 1234555555555 45 35689999999999999
Q ss_pred HHHHHhc----CCCCEEEEcCCCCCChHHHHHH---cCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCcc
Q 014172 170 QAVLAVC----SPGDEVIIPAPFWVSYPEMARI---ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTG 242 (429)
Q Consensus 170 ~~l~~l~----~~gd~Vlv~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG 242 (429)
+++.++. ++||+|++++|+|+++...+.. .|++++.++++. ++.+|+++|++++++++++|++++|+||||
T Consensus 75 ~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~nptG 152 (382)
T 4eb5_A 75 LAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK--YGEVDVSFIDQKLRDDTILVSVQHANNEIG 152 (382)
T ss_dssp HHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEECCSBCTTTC
T ss_pred HHHHHHHhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCC--CCccCHHHHHHHhcCCCeEEEEeccCCCcc
Confidence 9999998 8999999999999988776654 699999999863 466899999999998899999999999999
Q ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHH-H
Q 014172 243 SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF-V 321 (429)
Q Consensus 243 ~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~-~ 321 (429)
.+++ +++|.++|++| |++ |+|++|.. +..+..+.. .+.++++.||||.+|++| +||++++++. +
T Consensus 153 ~~~~---l~~i~~l~~~~-~~~-i~D~a~~~----g~~~~~~~~----~~~di~~~s~sK~~g~~g--~G~~~~~~~~~l 217 (382)
T 4eb5_A 153 TIQP---VEEISEVLAGK-AAL-HIDATASV----GQIEVDVEK----IGADMLTISSNDIYGPKG--VGALWIRKEAKL 217 (382)
T ss_dssp BBCC---HHHHHHHHTTS-SEE-EEECTTTB----TTBCCCHHH----HTCSEEEEETGGGTCCSS--CEEEEEETTCCC
T ss_pred ccCC---HHHHHHHHHHC-CCE-EEEcchhc----CCcccCccc----cCCCEEEeehHHhcCCCc--eEEEEEcccccc
Confidence 9999 88999999999 999 99999984 222112221 245689999999988666 7999887763 1
Q ss_pred HHHHH----HhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCc---eEEEEE
Q 014172 322 AACNK----IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG---AFYLFI 394 (429)
Q Consensus 322 ~~l~~----~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~---~~~~~~ 394 (429)
..... .......+++...+.++.++++. ..+++++++++++++++++.+.|++++|+++..+.+ +.++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 294 (382)
T 4eb5_A 218 QPVILGGGQENGLRSGSENVPSIVGFGKAAEI---TAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNV 294 (382)
T ss_dssp CCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEE
T ss_pred CceecCCCccccccCCCccHHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEE
Confidence 11100 01122234566666666677764 345678899999999999999999988888876642 335777
Q ss_pred ecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 395 DFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 395 ~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+++. +..+++++|.++ ||.+
T Consensus 295 ~~~~~------------~~~~~~~~l~~~-gi~v 315 (382)
T 4eb5_A 295 RFSYI------------EGESIVLSLDMA-GIQA 315 (382)
T ss_dssp EETTS------------CHHHHHHHHHHH-TCBC
T ss_pred EeCCc------------CHHHHHHHHHHC-CEEE
Confidence 77632 678899988765 8875
No 104
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.97 E-value=6.6e-31 Score=259.37 Aligned_cols=290 Identities=13% Similarity=0.107 Sum_probs=220.9
Q ss_pred CCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCC--------
Q 014172 107 FDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSP-------- 178 (429)
Q Consensus 107 ~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~-------- 178 (429)
.++++.+.+++.+.+......|....+..++++.+++++.+.+| .++++|++|+|+++++..++.+++.+
T Consensus 40 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~ 117 (397)
T 3f9t_A 40 SNVLPITRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGSLLN--NKDAYGHIVSGGTEANLMALRCIKNIWREKRRKG 117 (397)
T ss_dssp CCCCTHHHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHHHTT--CTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCcHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhC--CCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhc
Confidence 34567889999888765443443223557888888888888888 46789999999999999999998776
Q ss_pred -----CCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-CCcEEEEcCCCCCccCCCCHHHHHH
Q 014172 179 -----GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDE 252 (429)
Q Consensus 179 -----gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~p~NPtG~~~~~~~l~~ 252 (429)
||+|+++.|+|.++...++..|++++.+|++. ++.+|++.|++++++ ++++|++++|+||||.+.+ +++
T Consensus 118 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~ 192 (397)
T 3f9t_A 118 LSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKE--DYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDN---IEE 192 (397)
T ss_dssp CCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCT--TSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCC---HHH
T ss_pred ccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCC--CCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCC---HHH
Confidence 99999999999999999999999999999864 467899999999998 8999999999999999998 899
Q ss_pred HHHHHHhCCCeEEEEccCCcccccCCCCC-Cc------cccCCCCCCceEEEeccChhcccccceeeEEEcCHH-HHHHH
Q 014172 253 IARIVAKHPRLLVLSDEIYEHIIYAPATH-TS------FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-FVAAC 324 (429)
Q Consensus 253 I~~~a~~~~~i~vi~Deay~~~~~~~~~~-~~------~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~-~~~~l 324 (429)
|.++|++| |+++|+||+|..+.++.... .. ...+. . +..+++.|++|.++ +|.|+||++++++ +.+.+
T Consensus 193 i~~l~~~~-~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~s~~K~~~-~~~~~g~~~~~~~~~~~~~ 268 (397)
T 3f9t_A 193 LSKIAKEN-NIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFS-L-GVDSITIDPHKMGH-CPIPSGGILFKDIGYKRYL 268 (397)
T ss_dssp HHHHHHHH-TCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGG-G-TCSEEECCTTTTTC-CCSSCEEEEESSGGGGGGT
T ss_pred HHHHHHHh-CCeEEEEccccchhhhhccccccccccccccccc-c-cCCeEEEccccccC-CCCCceEEEEeCHHHHHhh
Confidence 99999999 99999999999765432110 00 01111 1 45688999999876 7889999987554 44433
Q ss_pred HHHhhccc-----------CCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEE
Q 014172 325 NKIQSQFT-----------SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLF 393 (429)
Q Consensus 325 ~~~~~~~~-----------~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~ 393 (429)
........ .+.+...+.++...+. ..++++..++++++++++.+.|+++ |+++..+..+.++|
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~ 342 (397)
T 3f9t_A 269 DVDAPYLTETRQATILGTRVGFGGACTYAVLRYLG-----REGQRKIVNECMENTLYLYKKLKEN-NFKPVIEPILNIVA 342 (397)
T ss_dssp CEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCCSSSEEE
T ss_pred ccCCccccCCCccccccccccchHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEcCCCccEEE
Confidence 22111111 1124455555555554 4567888889999999999999998 88865555555577
Q ss_pred EecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 394 IDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 394 ~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++++ +..+++++|.++ ||.+
T Consensus 343 ~~~~--------------~~~~~~~~l~~~-gi~v 362 (397)
T 3f9t_A 343 IEDE--------------DYKEVCKKLRDR-GIYV 362 (397)
T ss_dssp EECT--------------THHHHHHHHHHT-TCBC
T ss_pred EEeC--------------CHHHHHHHHHhC-CeEE
Confidence 7775 467899988877 8875
No 105
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.97 E-value=2.3e-31 Score=263.16 Aligned_cols=291 Identities=13% Similarity=0.135 Sum_probs=220.3
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCC--CCCCHHHHHHHHHHHHhhcCCCCCCC-cEEEecChHHHHHHHH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTP--NAGTLELRSAICHKLKEENGLSYTPD-QILVSNGAKQSILQAV 172 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~--~~G~~~lr~~ia~~l~~~~g~~~~~~-~i~~t~G~~~al~~~l 172 (429)
..++++.|. +++|+.+.+++.+.+.. .|.+ ..+..++++++++++ | .+++ +|++|+|+++++..++
T Consensus 19 ~~~~~~~g~--~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~----g--~~~~~~i~~~~g~t~a~~~~~ 87 (393)
T 2huf_A 19 NKLLMGPGP--SNAPQRVLDAMSRPILG---HLHPETLKIMDDIKEGVRYLF----Q--TNNIATFCLSASGHGGMEATL 87 (393)
T ss_dssp CCEECSSSC--CCCCHHHHHHTTSCCCC---TTSHHHHHHHHHHHHHHHHHH----T--CCCSEEEEESSCHHHHHHHHH
T ss_pred CeEEecCCC--CCCCHHHHHHHHhhhcc---CCCHHHHHHHHHHHHHHHHHh----C--CCCCcEEEEcCcHHHHHHHHH
Confidence 457776663 55778888887765432 2422 234456666666665 4 3454 8999999999999999
Q ss_pred HHhcCCCCEEEEcCCCCCChH--HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-CCcEEEEcCCCCCccCCCCHHH
Q 014172 173 LAVCSPGDEVIIPAPFWVSYP--EMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNL 249 (429)
Q Consensus 173 ~~l~~~gd~Vlv~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~p~NPtG~~~~~~~ 249 (429)
.+++++||+|++++|+|+++. ..++..|++++.++++. ++.+|++.+++++++ ++++|++++|+||||.+++
T Consensus 88 ~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~--- 162 (393)
T 2huf_A 88 CNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSKV--GQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQG--- 162 (393)
T ss_dssp HHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---
T ss_pred HHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCC--CCCCCHHHHHHHHhccCCcEEEEEccCCCccccCC---
Confidence 999999999999999998843 34566899999999864 356899999999987 8999999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChh-cccccceeeEEEcCHHHHHHHHHHh
Q 014172 250 LDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKA-FAMTGWRLGYIAGPKHFVAACNKIQ 328 (429)
Q Consensus 250 l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~~G~R~G~v~~~~~~~~~l~~~~ 328 (429)
+++|.++|++| |+++|+|++|.. +..... +. ..+.++++.|+||. +|++|+ ||+++++++++.+....
T Consensus 163 l~~i~~~~~~~-~~~li~D~a~~~----~~~~~~---~~-~~~~d~~~~s~sK~l~g~~G~--G~~~~~~~~~~~~~~~~ 231 (393)
T 2huf_A 163 LEGVGALCHQH-NCLLIVDTVASL----GGAPMF---MD-RWEIDAMYTGSQKVLGAPPGI--TPVSFSHRAVERYKRRN 231 (393)
T ss_dssp CTTHHHHHHHT-TCEEEEECTTTB----TTBCCC---TT-TTTCSEEECCSSSTTCCCSSC--EEEEECHHHHHHHHTCS
T ss_pred HHHHHHHHHHc-CCEEEEEccccc----CCCCcc---hh-hcCccEEEECCCcccccCCCe--EEEEECHHHHHHHhhcC
Confidence 88999999999 999999999864 221112 21 13567999999997 456776 99999999998887541
Q ss_pred ---hc--------------------ccCCCchHHHHHHHHHHhcCCCChH-HHHHHHHHHHHHHHHHHHHhccCCCceee
Q 014172 329 ---SQ--------------------FTSGASSISQKAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (429)
Q Consensus 329 ---~~--------------------~~~~~~~~~q~aa~~~l~~~~~~~~-~~~~~~~~~~~~r~~l~~~L~~l~g~~~~ 384 (429)
.. ...+++...+.++.++++. ..+ .+++.+++++++++++.+.|+++ |+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 307 (393)
T 2huf_A 232 TKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAM---ACEEGLPALIARHEDCAKRLYRGLQDA-GFELY 307 (393)
T ss_dssp SCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS
T ss_pred CCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHH---HHHhCHHHHHHHHHHHHHHHHHHHHHc-CCeec
Confidence 11 1123556666666667764 233 37788899999999999999998 88877
Q ss_pred cCC---ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 385 EPQ---GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 385 ~p~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+. ++++++++++.. .+..+++++|++++||.+
T Consensus 308 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~L~~~~gi~v 343 (393)
T 2huf_A 308 ADPKDRLSTVTTIKVPQG-----------VDWLKAAQYAMKTYLVEI 343 (393)
T ss_dssp SCGGGBCTTEEEEECCTT-----------CCHHHHHHHHHHHHCEEC
T ss_pred cCccccCCcEEEEEcCCC-----------CCHHHHHHHHHHhCCEEE
Confidence 663 455788888632 268899999988779876
No 106
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.97 E-value=1.9e-30 Score=255.70 Aligned_cols=296 Identities=17% Similarity=0.096 Sum_probs=217.0
Q ss_pred HHhcCC-CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 90 LAQAGV-SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 90 ~~~~g~-~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
+...|. ++|+++.+.++.++|+.+++++. .|. +...+++.+++++.+.+|.+ +++++++++|+++++
T Consensus 22 i~~~g~~~v~~~~~~~~~~~~~~~v~~a~~--------~~~---~~~~~~~~~~~~~a~~~g~~-~~~~~~~~~ggt~a~ 89 (374)
T 2aeu_A 22 LNEKGRDALYDLSGLSGGFLIDEKDKALLN--------TYI---GSSYFAEKVNEYGLKHLGGD-ENDKCVGFNRTSSAI 89 (374)
T ss_dssp HHHTCGGGCEECSSCCCCCCCCHHHHHHHT--------STT---HHHHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHHH
T ss_pred HhccCccceeeecccCCCCCCCHHHHHHHH--------Hhc---CchHHHHHHHHHHHHHhCCC-CcceEEEEcChHHHH
Confidence 345677 89999999998899999999875 221 11456778888887777753 357899999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcE-EEEcCCCCCccCC
Q 014172 169 LQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTEKSRL-LILCSPSNPTGSV 244 (429)
Q Consensus 169 ~~~l~~l~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~-i~l~~p~NPtG~~ 244 (429)
..++.++ +||+|+++.|+|+++.. .++..|++++.+ .|+++++++ ++++++ |++++||||||.
T Consensus 90 ~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v---------~d~~~l~~~-~~~~~~~v~~~~p~nptG~- 156 (374)
T 2aeu_A 90 LATILAL--KPKKVIHYLPELPGHPSIERSCKIVNAKYFES---------DKVGEILNK-IDKDTLVIITGSTMDLKVI- 156 (374)
T ss_dssp HHHHHHH--CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE---------SCHHHHHTT-CCTTEEEEEECBCTTSCBC-
T ss_pred HHHHHhC--CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe---------CCHHHHHhc-CCCccEEEEEccCCCCCCC-
Confidence 9999988 99999999998887543 677889999888 288999988 778999 999999999997
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHH
Q 014172 245 YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC 324 (429)
Q Consensus 245 ~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l 324 (429)
+..++++|.++|++| |+++|+||+|+.+..+.....+... .+.+++++||||.+ +|+|+||+++++++++.+
T Consensus 157 -~~~~l~~i~~l~~~~-~~~li~De~~~~~~~~~~~~~~~~~----~~~di~~~S~sK~l--~g~~~G~~~~~~~~~~~l 228 (374)
T 2aeu_A 157 -ELENFKKVINTAKNK-EAIVFVDDASGARVRLLFNQPPALK----LGADLVVTSTDKLM--EGPRGGLLAGKKELVDKI 228 (374)
T ss_dssp -CHHHHHHHHHHHHHH-TCCEEEECTTHHHHHHHTTCCCHHH----HTCSEEEEETTSSS--SSCSCEEEEEEHHHHHHH
T ss_pred -CcccHHHHHHHHHHc-CCEEEEECCcccccccccccCCccc----cCCcEEEecCcccc--cCcceEEEEECHHHHHHH
Confidence 777899999999999 9999999999876421110111111 23468999999985 579999999999999999
Q ss_pred HHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHH----HHHHHHHhccC---CCceee-cCCceEEEEEec
Q 014172 325 NKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER----RDFLVKSFGEL---EGVKMS-EPQGAFYLFIDF 396 (429)
Q Consensus 325 ~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~----r~~l~~~L~~l---~g~~~~-~p~~~~~~~~~l 396 (429)
......+..+++.+.+.++.++++.. ..+.+++..+..+.. ++.+.+.|..+ +|+.+. .|.|.+|+|.++
T Consensus 229 ~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~ 306 (374)
T 2aeu_A 229 YIEGTKFGLEAQPPLLAGIYRALKNF--NLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYK 306 (374)
T ss_dssp HHHHHTTTCBCCHHHHHHHHHHHHHC--CHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEES
T ss_pred HHhhccccCCCCHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEEEeecc
Confidence 88776666667889999999888762 121222222222222 45566666654 356653 566767677655
Q ss_pred CCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 397 STYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.... ..++.+++.++++++||.+
T Consensus 307 ~~~~~--------~~~~~~~~~~ll~~~gV~v 330 (374)
T 2aeu_A 307 DDTIN--------IKKLIEIGFNLLKNYGIIT 330 (374)
T ss_dssp SHHHH--------HHHHHHHHHHHHHHHCEEC
T ss_pred ccccc--------ccchHHHHHHHHHhCCEEE
Confidence 42100 0012348888888789986
No 107
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.97 E-value=4.2e-31 Score=261.13 Aligned_cols=293 Identities=12% Similarity=0.088 Sum_probs=216.9
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhc
Q 014172 97 VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC 176 (429)
Q Consensus 97 ~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~ 176 (429)
.+.|..+.+ .++|+.+.+++.+.+.. ...|....+..++|+++++++ | .++++|++|+|+++++..++++++
T Consensus 9 ~~yl~~~~~-~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~----g--~~~~~v~~t~g~t~a~~~~~~~~~ 80 (392)
T 2z9v_A 9 PVITLTAGP-VNAYPEVLRGLGRTVLY-DYDPAFQLLYEKVVDKAQKAM----R--LSNKPVILHGEPVLGLEAAAASLI 80 (392)
T ss_dssp CSEECSSSC-CCCCHHHHHHTTSCCCC-TTSHHHHHHHHHHHHHHHHHT----T--CSSCCEEESSCTHHHHHHHHHHHC
T ss_pred cceeecCCC-cCCCHHHHHHHhccccc-cccHHHHHHHHHHHHHHHHHh----C--CCCCEEEEeCCchHHHHHHHHHhc
Confidence 455665543 35678888887765432 111111123456666666665 5 356899999999999999999999
Q ss_pred CCCCEEEEcCCCCCChH--HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhc--ccCCcEEEEcCCCCCccCCCCHHHHHH
Q 014172 177 SPGDEVIIPAPFWVSYP--EMARIADATPVILPTRISENFLLDPKVLESKL--TEKSRLLILCSPSNPTGSVYPKNLLDE 252 (429)
Q Consensus 177 ~~gd~Vlv~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l--~~~~~~i~l~~p~NPtG~~~~~~~l~~ 252 (429)
++||+|++++|+|+++. ..++..|++++.++++.+ +.+|++++++++ .+++++|++++|+||||.+++ +++
T Consensus 81 ~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~ 155 (392)
T 2z9v_A 81 SPDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPYN--EAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINP---IDA 155 (392)
T ss_dssp CTTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCTT--SCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECC---HHH
T ss_pred CCCCEEEEecCCcccHHHHHHHHHcCCceEEeeCCCC--CCCCHHHHHHHHhcCCCCcEEEEeccCCCCceecc---HHH
Confidence 99999999999998763 445668999999998643 458999999999 458999999999999999999 889
Q ss_pred HHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhc-ccccceeeEEEcCHHHHHHHHHHh---
Q 014172 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF-AMTGWRLGYIAGPKHFVAACNKIQ--- 328 (429)
Q Consensus 253 I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~R~G~v~~~~~~~~~l~~~~--- 328 (429)
|.++|++| |++||+|++|+. +.....+.. .+.++++.|+||.+ +++| +||+++++++++.+....
T Consensus 156 i~~l~~~~-~~~li~D~a~~~----g~~~~~~~~----~~~d~~~~s~sK~~~~~~g--~G~l~~~~~~~~~l~~~~~g~ 224 (392)
T 2z9v_A 156 IGALVSAH-GAYLIVDAVSSF----GGMKTHPED----CKADIYVTGPNKCLGAPPG--LTMMGVSERAWAKMKANPLAP 224 (392)
T ss_dssp HHHHHHHT-TCEEEEECTTTB----TTBSCCGGG----GTCSEEEECSSSTTCCCSC--CEEEEECHHHHHHHHTCTTSC
T ss_pred HHHHHHHc-CCeEEEEccccc----CCccccccc----ccceEEEecCcccccCCCc--eeEEEECHHHHHHhhhccCCC
Confidence 99999999 999999999974 221112222 24568999999965 4445 599999999888876421
Q ss_pred -----------------hcccCCCchHHHHHHHHHHhcCCCChHH-HHHHHHHHHHHHHHHHHHhccCCCceeecCC---
Q 014172 329 -----------------SQFTSGASSISQKAGVAALGLGYAGGEV-VSKMVKAFRERRDFLVKSFGELEGVKMSEPQ--- 387 (429)
Q Consensus 329 -----------------~~~~~~~~~~~q~aa~~~l~~~~~~~~~-~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~--- 387 (429)
.....+++...+.++.++++. ..++ +++++++++++++++.+.|+++ |+++..|.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 300 (392)
T 2z9v_A 225 RASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDL---YLNEGPEAVWARHALTAKAMRAGVTAM-GLSVWAASDSI 300 (392)
T ss_dssp CSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSSSGGG
T ss_pred CceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHH---HHhccHHHHHHHHHHHHHHHHHHHHHc-CCeeccCCccc
Confidence 112233455666666667764 2444 7788999999999999999988 88877633
Q ss_pred -ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 388 -GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 388 -~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.++++|+.++.. .+..+++++|.+++||.+
T Consensus 301 ~~~~~~~~~~~~~-----------~~~~~l~~~L~~~~gi~v 331 (392)
T 2z9v_A 301 ASPTTTAVRTPDG-----------VDEKALRQAARARYGVVF 331 (392)
T ss_dssp BCTTEEEEECCTT-----------CCHHHHHHHHHHHHCEEC
T ss_pred cCCceEEEECCCC-----------CCHHHHHHHHHhcCCEEE
Confidence 456688888632 267899999988778875
No 108
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.97 E-value=4e-31 Score=259.86 Aligned_cols=291 Identities=14% Similarity=0.138 Sum_probs=219.0
Q ss_pred cCCCeEEcCCCCC--CCC-ChHHHHHHHHHHHHcC---CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHH
Q 014172 93 AGVSVIRLAAGEP--DFD-TPVLIAEAGINAIREG---FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (429)
Q Consensus 93 ~g~~~i~L~~g~~--~~~-~p~~v~~a~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~ 166 (429)
.|+.++||+.|.+ +++ +++.+.+++.+.+.+. ...| +..+..++++++++++ |. +++|++|+|+++
T Consensus 26 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~y-~~~~~~~l~~~la~~~----g~---~~~v~~~~g~t~ 97 (375)
T 2eh6_A 26 EGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSNLY-ENPWQEELAHKLVKHF----WT---EGKVFFANSGTE 97 (375)
T ss_dssp TCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCSCCCTTB-CCHHHHHHHHHHHHTS----SS---CEEEEEESSHHH
T ss_pred CCCEEEEcCCcccccccCCCCHHHHHHHHHHHHhccccCccc-CCHHHHHHHHHHHhhc----CC---CCeEEEeCchHH
Confidence 4567899999874 566 6899999999988653 2346 4556778888888774 43 489999999999
Q ss_pred HHHHHHHH---hc---CCC-CEEEEcCCCCCChHHHHHHcCCE-------------EEEecCCCCCCCCCCHHHHHhhcc
Q 014172 167 SILQAVLA---VC---SPG-DEVIIPAPFWVSYPEMARIADAT-------------PVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 167 al~~~l~~---l~---~~g-d~Vlv~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
++.+++++ ++ ++| |+|++++|+|+.+...+...+.. +..++. .|+++|+++++
T Consensus 98 a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~ 170 (375)
T 2eh6_A 98 SVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-------NDIDSVYKLLD 170 (375)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-------TCHHHHHTTCC
T ss_pred HHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-------chHHHHHHHhc
Confidence 99998875 45 788 99999999999987765554332 233332 48999999999
Q ss_pred cCCcEEEEcCCCCCccCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcc
Q 014172 227 EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 305 (429)
Q Consensus 227 ~~~~~i~l~~p~NPtG~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 305 (429)
+++++|++++|+||||.+ .+.+++++|.++|++| |+++|+||+|.++.+.+.. .++..+.. ... + .||||.++
T Consensus 171 ~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~-~~~~~~~~-~~d-~--~s~SK~~~ 244 (375)
T 2eh6_A 171 EETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEK-DVLLIIDEVQTGIGRTGEF-YAYQHFNL-KPD-V--IALAKGLG 244 (375)
T ss_dssp TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSS-SGGGGGTC-CCS-E--EEECGGGG
T ss_pred CCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHh-CCEEEEeccccCCCCCCcc-hhhhhcCC-CCC-E--EEEccccc
Confidence 889999999999999999 5688899999999999 9999999999976443321 12222221 122 2 28899999
Q ss_pred cccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeec
Q 014172 306 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 385 (429)
Q Consensus 306 ~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~ 385 (429)
+|+|+||+++++++++.+.......+.+.+.+.+.++.++|+. .+ +..++++++++++.+.|++++ ....
T Consensus 245 -~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~---~~~~~~~~~~~~l~~~L~~~~-~~~~- 314 (375)
T 2eh6_A 245 -GGVPIGAILAREEVAQSFTPGSHGSTFGGNPLACRAGTVVVDE----VE---KLLPHVREVGNYFKEKLKELG-KGKV- 314 (375)
T ss_dssp -TTSCCEEEEEEHHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHH----HH---HHHHHHHHHHHHHHHHHHHTT-SSEE-
T ss_pred -CCCCeEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHH----HH---HHHHHHHHHHHHHHHHHHHHh-cCCc-
Confidence 7999999999998877665532334556788888888888774 22 677888899999999998874 3333
Q ss_pred CCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 386 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 386 p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+..++|+|++++. +..+++++|++ .||.+
T Consensus 315 ~~~g~~~~~~~~~-------------~~~~~~~~l~~-~gi~~ 343 (375)
T 2eh6_A 315 KGRGLMLGLELER-------------ECKDYVLKALE-KGLLI 343 (375)
T ss_dssp EEETTEEEEECSS-------------CCHHHHHHHHH-TTEEC
T ss_pred eEEEEEEEEEEcC-------------cHHHHHHHHHH-CCCEE
Confidence 3345678998863 46789999886 48875
No 109
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.97 E-value=4.8e-31 Score=263.53 Aligned_cols=296 Identities=16% Similarity=0.131 Sum_probs=220.2
Q ss_pred hcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCC-CCC-------CCHHHHHHHHHHHHhhcCCCCCCCcEEEecC
Q 014172 92 QAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYT-PNA-------GTLELRSAICHKLKEENGLSYTPDQILVSNG 163 (429)
Q Consensus 92 ~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~-~~~-------G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G 163 (429)
..+++.|.|+.+.+. ++|+.+.+++.+.+.. ...|+ +.. +..+..+.+.+++.+.+| .++++|++|+|
T Consensus 18 ~~~~~~iyld~~~~~-~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~g 93 (423)
T 3lvm_A 18 RAMKLPIYLDYSATT-PVDPRVAEKMMQFMTM-DGTFGNPASRSHRFGWQAEEAVDIARNQIADLVG--ADPREIVFTSG 93 (423)
T ss_dssp --CCSSEECBTTTCC-CCCHHHHHHHTTSSST-TSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHT--CCGGGEEEESS
T ss_pred cccCCCEeecCCCcC-CCCHHHHHHHHHHHhh-cccccCCCccccchhHHHHHHHHHHHHHHHHHcC--CCCCeEEEeCC
Confidence 356788999988876 6688999998887651 01221 111 112344444444444455 46789999999
Q ss_pred hHHHHHHHHHHhcC----CCCEEEEcCCCCCChHHHHH---HcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcC
Q 014172 164 AKQSILQAVLAVCS----PGDEVIIPAPFWVSYPEMAR---IADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS 236 (429)
Q Consensus 164 ~~~al~~~l~~l~~----~gd~Vlv~~p~y~~~~~~~~---~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~ 236 (429)
+++++.++++++++ +||+|+++.|+|+++...+. ..|++++.++++. ++.+|+++|++++++++++|++++
T Consensus 94 gt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~ 171 (423)
T 3lvm_A 94 ATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR--NGIIDLKELEAAMRDDTILVSIMH 171 (423)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHCCTTEEEEECCS
T ss_pred hHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCC--CCccCHHHHHHhcCCCcEEEEEeC
Confidence 99999999998874 89999999999999887774 4599999999864 566899999999999999999999
Q ss_pred CCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEc
Q 014172 237 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG 316 (429)
Q Consensus 237 p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~ 316 (429)
|+||||.+++ +++|.++|++| |++||+||+|.... ....+.. .+.++++.||||.+|.+| +||+++
T Consensus 172 ~~nptG~~~~---l~~i~~l~~~~-~~~li~Dea~~~~~----~~~~~~~----~~~di~~~s~sK~~g~~g--~G~~~~ 237 (423)
T 3lvm_A 172 VNNEIGVVQD---IAAIGEMCRAR-GIIYHVDATQSVGK----LPIDLSQ----LKVDLMSFSGHKIYGPKG--IGALYV 237 (423)
T ss_dssp BCTTTCBBCC---HHHHHHHHHHH-TCEEEEECTTTTTT----SCCCTTT----SCCSEEEEESTTTTSCSS--CEEEEE
T ss_pred CCCCCccccC---HHHHHHHHHHc-CCEEEEEhhhhcCC----CCcChhh----cCCCEEEechHHhcCCCC--eEEEEE
Confidence 9999999999 88899999999 99999999987521 1111111 356699999999888666 899999
Q ss_pred CHHHHHHHHHHhh-------cccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCc-
Q 014172 317 PKHFVAACNKIQS-------QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG- 388 (429)
Q Consensus 317 ~~~~~~~l~~~~~-------~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~- 388 (429)
+++.++.+..... ....+.+...+.++.+++.. ..+++++++++++++++++.+.|++++|+++..+.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 314 (423)
T 3lvm_A 238 RRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRI---AKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEH 314 (423)
T ss_dssp CBTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEESCSTT
T ss_pred eccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccc
Confidence 8776655443321 22334566677776677765 355688999999999999999999998998876654
Q ss_pred --eEEEEEecCCccCCcccCCCCCCChHHHHHHHHH
Q 014172 389 --AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLD 422 (429)
Q Consensus 389 --~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~ 422 (429)
+.++++.++.. +..++.+.|.+
T Consensus 315 ~~~~~~~~~~~~~------------~~~~l~~~l~~ 338 (423)
T 3lvm_A 315 GAPNILNVSFNYV------------EGESLIMALKD 338 (423)
T ss_dssp BCTTEEEEEETTS------------CHHHHHHHTTT
T ss_pred cCCCeEEEEeCCC------------CHHHHHHHHhh
Confidence 23455555532 67788887754
No 110
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.97 E-value=9.3e-31 Score=259.04 Aligned_cols=297 Identities=16% Similarity=0.159 Sum_probs=219.4
Q ss_pred cCCCeEEcCCCCCCCC---ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGEPDFD---TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~~~~~---~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.++|++.|.+... .++.+.+++.+.+.+.... ...+..+.++++++++.+.+| ++++++|+|+++++.
T Consensus 34 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~--~~~~~~~~~~~l~~~la~~~g----~~~v~~~~~gt~a~~ 107 (392)
T 3ruy_A 34 EGNRYMDLLSAYSAVNQGHRHPKIINALIDQANRVTLT--SRAFHSDQLGPWYEKVAKLTN----KEMVLPMNTGAEAVE 107 (392)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCC--CTTSEETTHHHHHHHHHHHHT----CSEEEEESSHHHHHH
T ss_pred CCCEEEEcCCChhhhccCCCCHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHhcC----CCEEEEeCcHHHHHH
Confidence 4677999998875544 4789999999988653221 111223334444444444444 679999999999999
Q ss_pred HHHHHhcCC----------CCEEEEcCCCCCChHHHHHHcCCE-------------EEEecCCCCCCCCCCHHHHHhhcc
Q 014172 170 QAVLAVCSP----------GDEVIIPAPFWVSYPEMARIADAT-------------PVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 170 ~~l~~l~~~----------gd~Vlv~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
.+++.+..+ ||.|+++.|+|+++...+...+.. +..++. .|+++|+++++
T Consensus 108 ~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~ 180 (392)
T 3ruy_A 108 TAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-------GDLEALKAAIT 180 (392)
T ss_dssp HHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-------TCHHHHHHHCC
T ss_pred HHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-------ccHHHHHHHhc
Confidence 999987644 689999999998876665544322 444443 28999999999
Q ss_pred cCCcEEEEcCCCCCccCCCCHHH-HHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcc
Q 014172 227 EKSRLLILCSPSNPTGSVYPKNL-LDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 305 (429)
Q Consensus 227 ~~~~~i~l~~p~NPtG~~~~~~~-l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 305 (429)
+++++|++++|+||||.+++.++ +++|.++|++| |+++|+||+|.++.+.+... ..... +.... +.||||.++
T Consensus 181 ~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~-~~~li~De~~~~~~~~g~~~-~~~~~-~~~~d---~~~~SK~l~ 254 (392)
T 3ruy_A 181 PNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKE-NVLFVADEIQTGLGRTGKVF-ACDWD-NVTPD---MYILGKALG 254 (392)
T ss_dssp TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTT-TCEEEEECTTTTTTTTSSSS-GGGGG-TCCCS---EEEECGGGG
T ss_pred cCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeechhCCCccccch-hhhcc-CCCCC---EEEEchhhh
Confidence 89999999999999999996665 99999999999 99999999998776655321 11111 11122 347899876
Q ss_pred ccc-ceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC--CCce
Q 014172 306 MTG-WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL--EGVK 382 (429)
Q Consensus 306 ~~G-~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l--~g~~ 382 (429)
+| +|+||+++++++++.+.......+++.+.+++.++.++|+. .+. ++.++.++++++++.+.|+++ +.+.
T Consensus 255 -gG~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~ 328 (392)
T 3ruy_A 255 -GGVFPISCAAANRDILGVFEPGSHGSTFGGNPLACAVSIAALEV----LEE-EKLTERSLQLGEKLVGQLKEIDNPMIT 328 (392)
T ss_dssp -TTTSCCEEEEECHHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHH----HHH-TTHHHHHHHHHHHHHHHHTTCCCTTEE
T ss_pred -CChhhhEEEEECHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHH----HHh-hhHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 56 99999999999988877666666778899999999999985 222 678888999999999999987 3466
Q ss_pred eecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 383 MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 383 ~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
...+.++|+ ++.++. +..+++++|++ .||.+.
T Consensus 329 ~~~~~g~~~-~~~~~~-------------~~~~l~~~l~~-~gi~v~ 360 (392)
T 3ruy_A 329 EVRGKGLFI-GIELNE-------------PARPYCEQLKA-AGLLCK 360 (392)
T ss_dssp EEEEETTEE-EEEESS-------------CSHHHHHHHHT-TTEECC
T ss_pred EEEeeeeEE-EEEEcc-------------hHHHHHHHHHH-CCcEEe
Confidence 666777664 455753 46789999885 498863
No 111
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.97 E-value=8.3e-31 Score=254.88 Aligned_cols=292 Identities=19% Similarity=0.242 Sum_probs=211.3
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 175 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l 175 (429)
++|+|+.+.+.+ +++.+.+++.+... +...|++..+..+||++++++++ .+++++++|+++++.+++.++
T Consensus 4 ~~i~~~~~~~~~-p~~~~~~a~~~~~~-~~~~y~~~~~~~~l~~~la~~~g--------~~~~~~~~~gt~a~~~~~~~~ 73 (347)
T 1jg8_A 4 MMIDLRSDTVTK-PTEEMRKAMAQAEV-GDDVYGEDPTINELERLAAETFG--------KEAALFVPSGTMGNQVSIMAH 73 (347)
T ss_dssp -CEECSCGGGCC-CCHHHHHHHHTCCC-CCGGGTCCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHH
T ss_pred eEEEeccccCCC-CCHHHHHHHhcCCC-CCcccCCChHHHHHHHHHHHHhC--------CceEEEecCcHHHHHHHHHHh
Confidence 579999999887 55678888765432 23468778888999999999873 246788888899999999999
Q ss_pred cCCCCEEEEcCCCCCChH---HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------CCcEEEEcCCCCCc-cCCC
Q 014172 176 CSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPT-GSVY 245 (429)
Q Consensus 176 ~~~gd~Vlv~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~~~~i~l~~p~NPt-G~~~ 245 (429)
+++||+|++++|+|.... ..++..|++++.+ .+ .++.+|+++|++++++ ++++|++++||||| |.++
T Consensus 74 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~--~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~ 150 (347)
T 1jg8_A 74 TQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PG--KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVV 150 (347)
T ss_dssp CCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CE--ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCC
T ss_pred cCCCCEEEEcCcchhhhccccchhhccCeEEEEe-cC--CCCccCHHHHHHHhccccccccCceEEEEeccccccCCccC
Confidence 999999999999986532 3677889999988 43 2456899999999975 68999999999999 9999
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCccc--ccCCCCCCccccCCCCCCceEEEeccChhcccccceee-EEEcCHHHHH
Q 014172 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHI--IYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLG-YIAGPKHFVA 322 (429)
Q Consensus 246 ~~~~l~~I~~~a~~~~~i~vi~Deay~~~--~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G-~v~~~~~~~~ 322 (429)
+.+++++|+++|++| |++||+|++|... .+.+. +...+....+ .++.||||.++++ +| |+++++++++
T Consensus 151 ~~~~l~~i~~~a~~~-~~~li~D~a~~~~~~~~~~~---~~~~~~~~~d--~~~~s~sK~l~~~---~G~~~~~~~~~~~ 221 (347)
T 1jg8_A 151 PLENIKEICTIAKEH-GINVHIDGARIFNASIASGV---PVKEYAGYAD--SVMFCLSKGLCAP---VGSVVVGDRDFIE 221 (347)
T ss_dssp CHHHHHHHHHHHHHH-TCEEEEEETTHHHHHHHHCC---CHHHHHHTCS--EEEEESSSTTCCS---SCEEEEECHHHHH
T ss_pred cHHHHHHHHHHHHHC-CCEEEeehhhhhcchhhcCC---ChHHhccccc--EEEEecccccCCC---ceEEEEcCHHHHH
Confidence 999999999999999 9999999997532 12221 1111111123 3445899999743 57 5667888888
Q ss_pred HHHHHhhcccCCC--chHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceee-cCCceEEEEEecCCc
Q 014172 323 ACNKIQSQFTSGA--SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-EPQGAFYLFIDFSTY 399 (429)
Q Consensus 323 ~l~~~~~~~~~~~--~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~-~p~~~~~~~~~l~~~ 399 (429)
.+...+..+..+. +...+.++..+++. ..+.++ + ..++++.+.+.|+++ |+++. .+..+.|+|++++..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~---~-~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~ 293 (347)
T 1jg8_A 222 RARKARKMLGGGMRQAGVLAAAGIIALTK---MVDRLK---E-DHENARFLALKLKEI-GYSVNPEDVKTNMVILRTDNL 293 (347)
T ss_dssp HHHHHHHHHTCCCSSTHHHHHHHHHHHHH---SSTTHH---H-HHHHHHHHHHHHHHH-TCBCCGGGCCSSEEEEECTTS
T ss_pred HHHHHHHHcCCchhHHHHHHHHHHHHHHH---HHHHHH---H-HHHHHHHHHHHHHhc-CceeccCCCcceEEEEEcccc
Confidence 8776655444333 44555666666654 122222 2 234678888888887 77652 344455699998731
Q ss_pred cCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 400 YGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+ .+..+++++|.++ ||.+
T Consensus 294 -~---------~~~~~~~~~l~~~-gi~v 311 (347)
T 1jg8_A 294 -K---------VNAHGFIEALRNS-GVLA 311 (347)
T ss_dssp -S---------SCHHHHHHHHHHH-TEEC
T ss_pred -c---------CCHHHHHHHHHHC-CCEE
Confidence 0 2688999999765 8876
No 112
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.97 E-value=2.7e-30 Score=254.18 Aligned_cols=286 Identities=11% Similarity=0.105 Sum_probs=215.7
Q ss_pred CCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEE
Q 014172 105 PDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVII 184 (429)
Q Consensus 105 ~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv 184 (429)
.+.++|+++.+++.+.+.. .++ ....++.+.+.+++.+.+|.+.++++|++|+|+++++. ++..++++||+|++
T Consensus 9 gp~~~~~~v~~a~~~~~~~---~~~--~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi~ 82 (384)
T 3zrp_A 9 GPTTIKEDVLVAGLENNVG---FTS--KEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLLKPNDKILV 82 (384)
T ss_dssp SCSCCCHHHHHHTTCCSCC---TTS--HHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEEE
T ss_pred CCCCCCHHHHHHhhccccc---ccc--HHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEEE
Confidence 3455678888877654321 121 12244545555555555564333388999999999999 99999999999999
Q ss_pred cCCCCCC--hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCC
Q 014172 185 PAPFWVS--YPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP 261 (429)
Q Consensus 185 ~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~ 261 (429)
++|+|.+ +...++..|++++.++++. ++.+|++++++++++ ++++|++++|+||||.+++ +++|.++|++|
T Consensus 83 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~- 156 (384)
T 3zrp_A 83 VSNGVFGDRWEQIFKRYPVNVKVLRPSP--GDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREP---VKDVINKIRKY- 156 (384)
T ss_dssp ECSSHHHHHHHHHHTTSSCEEEEECCST--TCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECC---HHHHHHHHGGG-
T ss_pred ecCCcchHHHHHHHHHcCCcEEEecCCC--CCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECc---HHHHHHHHHhc-
Confidence 9999965 5566788999999999864 456899999999987 8999999999999999999 88999999999
Q ss_pred CeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHH-------------HHHh
Q 014172 262 RLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC-------------NKIQ 328 (429)
Q Consensus 262 ~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l-------------~~~~ 328 (429)
|+++|+|++|..... ...+. ..+.++++.|+||.++ .+.++||+++++++++.+ ....
T Consensus 157 ~~~li~D~a~~~~~~----~~~~~----~~~~d~~~~s~~K~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (384)
T 3zrp_A 157 VELIVVDGVSSVGAE----EVKAE----EWNVDVYLTASQKALG-SAAGLGLLLLSPKALSILDSQNSIAGYYLDLRNWL 227 (384)
T ss_dssp EEEEEEECTTTTTTS----CCCTT----TTTCSEEEEETTSTTC-CCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHHHH
T ss_pred CCEEEEECcccccCc----ccccc----ccCCCEEEecCccccc-CCCceEEEEECHHHHHHhcCCCCCCcccccHHHHH
Confidence 999999999875321 11111 1356799999999885 345599999999988777 2222
Q ss_pred h---------ccc-CCCchHHHHHHHHHHhcCCCChHH-HHHHHHHHHHHHHHHHHHhccCCCceeecCC----ceEEEE
Q 014172 329 S---------QFT-SGASSISQKAGVAALGLGYAGGEV-VSKMVKAFRERRDFLVKSFGELEGVKMSEPQ----GAFYLF 393 (429)
Q Consensus 329 ~---------~~~-~~~~~~~q~aa~~~l~~~~~~~~~-~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~----~~~~~~ 393 (429)
. ... .+++...+.++.++++. ..++ +++++++++++++++.+.|+++ |+++..+. +++++|
T Consensus 228 ~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~ 303 (384)
T 3zrp_A 228 PVMRGAEEGKAAYFATPPVHVILQLAEAFRL---IEKEGIENRIKRHTMVASAIRAGLEAL-GLEIVARRPESYSNTVTG 303 (384)
T ss_dssp HHHHHHHTTCCCCSSCCCHHHHHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSCSSGGGBCSSEEE
T ss_pred HHHHhhcccCCCcCCCCCHHHHHHHHHHHHH---HHhcCHHHHHHHHHHHHHHHHHHHHHC-CCeEccCcccccCccEEE
Confidence 1 111 24566666666666664 2333 7889999999999999999998 88887776 567788
Q ss_pred EecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 394 IDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 394 ~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.++.. +..+++++|.++ ||.+
T Consensus 304 ~~~~~~------------~~~~~~~~l~~~-gi~v 325 (384)
T 3zrp_A 304 VILKVA------------DPQKVLAGTVNE-GVEF 325 (384)
T ss_dssp EECSSS------------CHHHHHHHHHTT-TCCC
T ss_pred EECCCC------------CHHHHHHHHHHC-CEEE
Confidence 998752 688999999877 8875
No 113
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.97 E-value=2.5e-30 Score=256.92 Aligned_cols=268 Identities=13% Similarity=0.179 Sum_probs=194.2
Q ss_pred EEcCCCCCCCCChHHHHHHHHHHHH---cCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHH
Q 014172 98 IRLAAGEPDFDTPVLIAEAGINAIR---EGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (429)
Q Consensus 98 i~L~~g~~~~~~p~~v~~a~~~~~~---~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 174 (429)
..++.|+|++.+|+.+.+++.+++. .....|....+..+..+++++++.+.+|. +++++++++++++..++++
T Consensus 23 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~----~~~i~~~sG~~a~~~~l~~ 98 (398)
T 2rfv_A 23 STGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERG----EAGLATASGISAITTTLLT 98 (398)
T ss_dssp TTCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHTC----SEEEEESSHHHHHHHHHHH
T ss_pred CCCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhCC----CcEEEECCHHHHHHHHHHH
Confidence 4688999999887665555555443 11222322222233444444444444453 2566666677999999999
Q ss_pred hcCCCCEEEEcCCCCCChHHHH----HHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHH
Q 014172 175 VCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLL 250 (429)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l 250 (429)
++++||+|+++.|+|+++...+ +..|.+++.++.+ |++++++.+++++++|++++|+||||.+++ +
T Consensus 99 ~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l 168 (398)
T 2rfv_A 99 LCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-------KPEEIRAAMRPETKVVYIETPANPTLSLVD---I 168 (398)
T ss_dssp HCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-------SHHHHHHHCCTTEEEEEEESSBTTTTBCCC---H
T ss_pred HhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHhcCCCCeEEEEECCCCCCCcccC---H
Confidence 9999999999999999988776 7889999999862 899999999989999999999999999998 9
Q ss_pred HHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccccccee-eEEEcCHHHHH-HHHHHh
Q 014172 251 DEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVA-ACNKIQ 328 (429)
Q Consensus 251 ~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~-G~v~~~~~~~~-~l~~~~ 328 (429)
++|.++|++| |+++|+||+|..+.+.. ++ . .+.++++.|+||.++.+|+|+ ||+++++++++ .+....
T Consensus 169 ~~i~~l~~~~-~~~li~De~~~~~~~~~----~~-~----~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~ 238 (398)
T 2rfv_A 169 ETVAGIAHQQ-GALLVVDNTFMSPYCQQ----PL-Q----LGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGL 238 (398)
T ss_dssp HHHHHHHHHT-TCEEEEECTTTCTTTCC----GG-G----GTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHH
T ss_pred HHHHHHHHHc-CCEEEEECCCcccccCC----ch-h----hCCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHH
Confidence 9999999999 99999999999765431 11 1 256799999999998899998 99999999887 566555
Q ss_pred hcc-cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc--------------CCCceeecC----Cce
Q 014172 329 SQF-TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE--------------LEGVKMSEP----QGA 389 (429)
Q Consensus 329 ~~~-~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~--------------l~g~~~~~p----~~~ 389 (429)
..+ +.+.+.+.+.++.++++. ...++++. .++++.+.+.|++ +|++++..| .++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~----~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~ 311 (398)
T 2rfv_A 239 KDITGGCMSPFNAWLTLRGVKT---LGIRMERH----CENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGG 311 (398)
T ss_dssp HHTTCCCCCHHHHHHHHHHHTT---HHHHHHHH----HHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCS
T ss_pred HhCCCCCCCHHHHHHHHhhhhh---HHHHHHHH----HHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCce
Confidence 555 557888899998888875 34444443 3444444444443 344554443 455
Q ss_pred EEEEEecC
Q 014172 390 FYLFIDFS 397 (429)
Q Consensus 390 ~~~~~~l~ 397 (429)
+ ++++++
T Consensus 312 ~-~~~~~~ 318 (398)
T 2rfv_A 312 I-ISFEIA 318 (398)
T ss_dssp E-EEEEET
T ss_pred E-EEEEEc
Confidence 5 555886
No 114
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.97 E-value=8.7e-31 Score=254.82 Aligned_cols=281 Identities=14% Similarity=0.044 Sum_probs=211.5
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCCC--CCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEE
Q 014172 106 DFDTPVLIAEAGINAIREGFTRYTP--NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVI 183 (429)
Q Consensus 106 ~~~~p~~v~~a~~~~~~~~~~~Y~~--~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vl 183 (429)
+.++|+.+.+++.+.+.. .+++ ..+..++|+++++++ | .++++|++|+|+++++..++++++++||+|+
T Consensus 9 p~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~----g--~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl 79 (352)
T 1iug_A 9 PVRLHPKALEALARPQLH---HRTEAAREVFLKARGLLREAF----R--TEGEVLILTGSGTLAMEALVKNLFAPGERVL 79 (352)
T ss_dssp SCCCCHHHHHHHHSCCCC---TTSHHHHHHHHHHHHHHHHHH----T--CSSEEEEEESCHHHHHHHHHHHHCCTTCEEE
T ss_pred CCCCCHHHHHHhccCCCC---ccCHHHHHHHHHHHHHHHHHh----C--CCCceEEEcCchHHHHHHHHHhccCCCCeEE
Confidence 345678898888776532 1222 123466777777775 4 3568999999999999999999999999999
Q ss_pred EcCCCCCChH--HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCC
Q 014172 184 IPAPFWVSYP--EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP 261 (429)
Q Consensus 184 v~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~ 261 (429)
+++|+|+++. ..++..|++++.++++. ++.+|++++++ +++++|++++|+||||.+++ +++|.++|++|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~---~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~ 151 (352)
T 1iug_A 80 VPVYGKFSERFYEIALEAGLVVERLDYPY--GDTPRPEDVAK---EGYAGLLLVHSETSTGALAD---LPALARAFKEKN 151 (352)
T ss_dssp EEECSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCTTTSCC---SSCSEEEEESEETTTTEECC---HHHHHHHHHHHC
T ss_pred EEeCCchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHhc---cCCcEEEEEEecCCcceecC---HHHHHHHHHhhC
Confidence 9999999875 44566899999999864 35589988877 67899999999999999999 889999999973
Q ss_pred -CeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHH---------HH----HH
Q 014172 262 -RLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA---------CN----KI 327 (429)
Q Consensus 262 -~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~---------l~----~~ 327 (429)
|++||+||+|.. +.....+.. .+.++++.|+||.++ .+.++||+++++++++. +. ..
T Consensus 152 ~~~~li~D~a~~~----~~~~~~~~~----~~~d~~~~s~~K~~~-~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (352)
T 1iug_A 152 PEGLVGADMVTSL----LVGEVALEA----MGVDAAASGSQKGLM-CPPGLGFVALSPRALERLKPRGYYLDLARELKAQ 222 (352)
T ss_dssp TTCEEEEECTTTB----TTBCCCSGG----GTCSEEEEESSSTTC-CCSCEEEEEECHHHHHTCCCCSSTTCHHHHHHHH
T ss_pred CCCEEEEECCccc----cCcceeccc----cCeeEEEecCccccc-CCCceeEEEECHHHHHHhhCCCceeeHHHHHhhc
Confidence 699999999974 211112211 245688999999553 22348999999987654 22 11
Q ss_pred -hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCC-ceEEEEEecCCccCCccc
Q 014172 328 -QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ-GAFYLFIDFSTYYGSEAE 405 (429)
Q Consensus 328 -~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~-~~~~~~~~l~~~~~~~~~ 405 (429)
......+++...+.++.++++. ..+++++++++++++++++.+.|+++ |+++..+. .++++|++++..
T Consensus 223 ~~~~~~~~~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~------ 292 (352)
T 1iug_A 223 KEGESAWTPAINLVLAVAAVLEE---VLPRLEEHLALKAWQNALLYGVGEEG-GLRPVPKRFSPAVAAFYLPEG------ 292 (352)
T ss_dssp TTTCCSSCCCHHHHHHHHHHHHH---HGGGHHHHHHHHHHHHHHHHHHHHHT-TCEESCSSBCTTCEEEECCTT------
T ss_pred ccCCCCCCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccccccCCeEEEEEcCCC------
Confidence 1223345677777777777765 23447889999999999999999998 89887774 666789998732
Q ss_pred CCCCCCChHHHHHHHHHhCCeec
Q 014172 406 GFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 406 ~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+..+++++|.++ ||.+
T Consensus 293 -----~~~~~~~~~l~~~-gi~v 309 (352)
T 1iug_A 293 -----VPYARVKEAFAQR-GAVI 309 (352)
T ss_dssp -----CCHHHHHHHHHTT-TEEC
T ss_pred -----CCHHHHHHHHHHC-CEEE
Confidence 2678999998876 9876
No 115
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.97 E-value=1.5e-31 Score=267.62 Aligned_cols=312 Identities=11% Similarity=0.071 Sum_probs=221.1
Q ss_pred cCCCeEEcCCCCC--CCC-ChHHHHHHHHHHHHcCC---CCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHH
Q 014172 93 AGVSVIRLAAGEP--DFD-TPVLIAEAGINAIREGF---TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (429)
Q Consensus 93 ~g~~~i~L~~g~~--~~~-~p~~v~~a~~~~~~~~~---~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~ 166 (429)
.|+.+|+++.|.+ +++ +|+.+.+++.+.+.... ..|.+..+..+|+++|++++. | . .+++|++|+|+++
T Consensus 39 ~g~~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~---~-~-~~~~v~~~~g~~~ 113 (426)
T 1sff_A 39 EGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVP---G-D-FAKKTLLVTTGSE 113 (426)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSS---C-S-SCEEEEEESSHHH
T ss_pred CCCEEEEcccChhhcccCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCC---c-c-cccEEEEeCchHH
Confidence 4667899988874 444 47889999999876432 246677788899999999863 3 1 3489999999999
Q ss_pred HHHHHHH---HhcCCCCEEEEcCCCCCChH-HHHHHcCCE-------------EEEecCCCC---CCCCCCHHHHHhhcc
Q 014172 167 SILQAVL---AVCSPGDEVIIPAPFWVSYP-EMARIADAT-------------PVILPTRIS---ENFLLDPKVLESKLT 226 (429)
Q Consensus 167 al~~~l~---~l~~~gd~Vlv~~p~y~~~~-~~~~~~g~~-------------~~~v~~~~~---~~~~~d~e~l~~~l~ 226 (429)
++..+++ .++++| .|++.+|+|+++. ..+...|.+ ++.++++.. .++.+|++.|+++++
T Consensus 114 a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~ 192 (426)
T 1sff_A 114 AVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFK 192 (426)
T ss_dssp HHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHH
Confidence 9999988 677777 8999999998755 466666654 667776421 134478999999886
Q ss_pred -----cCCcEEEE-cCCCCCcc-CCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEec
Q 014172 227 -----EKSRLLIL-CSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNG 299 (429)
Q Consensus 227 -----~~~~~i~l-~~p~NPtG-~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S 299 (429)
+++++|++ ++++| || .+++.+++++|.++|++| |++||+||+|.++.+.+.. ..+.. .+..+.+.|
T Consensus 193 ~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~-~~~li~De~~~~~~~~g~~-~~~~~----~~~~~di~s 265 (426)
T 1sff_A 193 NDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEH-GIMLIADEVQSGAGRTGTL-FAMEQ----MGVAPDLTT 265 (426)
T ss_dssp HTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSS-SGGGG----TTSCCSEEE
T ss_pred hccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHc-CCEEEEechhhccCcccch-hhhhh----cCCCCCEEE
Confidence 45677766 56678 99 788999999999999999 9999999999987665421 11111 122233559
Q ss_pred cChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc--
Q 014172 300 FSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-- 377 (429)
Q Consensus 300 ~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-- 377 (429)
|||.++. |+|+||+++++++++.+.......+.+.+.++|.++.++|+. ..+ ....++++++++++.+.|++
T Consensus 266 ~sK~~~~-GlriG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~---~~~--~~~~~~~~~~~~~l~~~l~~~~ 339 (426)
T 1sff_A 266 FAKSIAG-GFPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLKV---FEQ--ENLLQKANDLGQKLKDGLLAIA 339 (426)
T ss_dssp ECGGGGT-SSCCEEEEEEHHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHH---HHH--TTHHHHHHHHHHHHHHHHHHHH
T ss_pred EcccccC-CCceEEEEEcHHHHhhhccCCcCcCCCCCHHHHHHHHHHHHH---HHh--cCHHHHHHHHHHHHHHHHHHHH
Confidence 9999995 999999999999887765433445566789999999888864 111 13455566667777666655
Q ss_pred --CCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 378 --LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 378 --l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++.+...++. |+|+|++++...... .....+..+++++|+++ ||.+
T Consensus 340 ~~~~~~~~~~~~-g~~~~~~~~~~~~~~---~~~~~~~~~l~~~l~~~-gi~v 387 (426)
T 1sff_A 340 EKHPEIGDVRGL-GAMIAIELFEDGDHN---KPDAKLTAEIVARARDK-GLIL 387 (426)
T ss_dssp HTCTTEEEEEEE-TTEEEEEEBGGGCTT---SBCHHHHHHHHHHHHHT-TEEC
T ss_pred HhCCCeEEEEEE-EEEEEEEEecCcccc---CCChHHHHHHHHHHHHC-CcEE
Confidence 3334444566 567899985310000 00001467899998876 9876
No 116
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.97 E-value=4.7e-30 Score=251.90 Aligned_cols=292 Identities=14% Similarity=0.108 Sum_probs=215.6
Q ss_pred EEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCC-----CCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHH
Q 014172 98 IRLAAGEPDFDTPVLIAEAGINAIREGFTRYTP-----NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 172 (429)
Q Consensus 98 i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~-----~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l 172 (429)
|.|+.+.+. ++|+.+.+++.+.+.+.. .+.. ..+..++.+.+.+++.+.+| .++++|++|+|+++++.+++
T Consensus 2 iyld~~~~~-~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~~i~~~~g~~~a~~~~~ 77 (382)
T 4hvk_A 2 AYFDYTSAK-PVDERILEAMLPYMTESF-GNPSSVHSYGFKAREAVQEAREKVAKLVN--GGGGTVVFTSGATEANNLAI 77 (382)
T ss_dssp CBCBTTTCC-CCCHHHHHHHHHHHHTSC-CCTTCSSHHHHHHHHHHHHHHHHHHHHTT--CTTEEEEEESSHHHHHHHHH
T ss_pred EeecCCCcC-CCCHHHHHHHHHHHHhhc-CCCcccchHHHHHHHHHHHHHHHHHHHcC--CCcCeEEEECCchHHHHHHH
Confidence 344444433 457889999999886522 2211 11224555566666666666 46789999999999999999
Q ss_pred HHhc----CCCCEEEEcCCCCCChHHHHHH---cCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCC
Q 014172 173 LAVC----SPGDEVIIPAPFWVSYPEMARI---ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVY 245 (429)
Q Consensus 173 ~~l~----~~gd~Vlv~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~ 245 (429)
++++ ++||+|+++.++|+++...+.. .|++++.++++. ++.+|+++|++++++++++|++++|+||||.++
T Consensus 78 ~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~ 155 (382)
T 4hvk_A 78 IGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK--YGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQ 155 (382)
T ss_dssp HHHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBC
T ss_pred HHhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCC--CCCcCHHHHHHHhccCceEEEEECCCCCceeeC
Confidence 9998 9999999999999998876554 699999999863 456899999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHH
Q 014172 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN 325 (429)
Q Consensus 246 ~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~ 325 (429)
+ +++|.++|++| |+ ||+|++|... .....+.. .+.++++.|+||.+|++| +|+++++++. .+.
T Consensus 156 ~---~~~i~~l~~~~-~~-li~D~a~~~~----~~~~~~~~----~~~d~~~~s~~K~~g~~g--~g~~~~~~~~--~~~ 218 (382)
T 4hvk_A 156 P---VEEISEVLAGK-AA-LHIDATASVG----QIEVDVEK----IGADMLTISSNDIYGPKG--VGALWIRKEA--KLQ 218 (382)
T ss_dssp C---HHHHHHHHSSS-SE-EEEECTTTBT----TBCCCHHH----HTCSEEEEESGGGTSCTT--CEEEEEETTC--CCC
T ss_pred C---HHHHHHHHHHc-CE-EEEEhHHhcC----CCCCCchh----cCCCEEEEeHHHhcCCCc--eEEEEEcCcc--CcC
Confidence 9 88999999999 99 9999998752 11112211 245699999999887666 6777665543 111
Q ss_pred HH-------hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCc---eEEEEEe
Q 014172 326 KI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG---AFYLFID 395 (429)
Q Consensus 326 ~~-------~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~---~~~~~~~ 395 (429)
.. .......++...+.++.+++.. ..+++++.+++++++++++.+.|++++|+++..+.+ +.++++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~ 295 (382)
T 4hvk_A 219 PVILGGGQENGLRSGSENVPSIVGFGKAAEI---TAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVR 295 (382)
T ss_dssp CSSCSSCTGGGTSCSCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEE
T ss_pred cccccCCCcCccccCCcCHHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEE
Confidence 11 0111233566777777777764 356788999999999999999999998998876654 3356677
Q ss_pred cCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 396 FSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 396 l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++.. +..++.+.|.++ ||.+
T Consensus 296 ~~~~------------~~~~~~~~l~~~-gi~v 315 (382)
T 4hvk_A 296 FSYI------------EGESIVLSLDMA-GIQA 315 (382)
T ss_dssp ETTC------------CHHHHHHHHHHT-TCBC
T ss_pred ECCC------------CHHHHHHHHHHC-CEEE
Confidence 7642 678899888665 8876
No 117
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.97 E-value=2e-30 Score=253.26 Aligned_cols=293 Identities=13% Similarity=0.133 Sum_probs=222.5
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCC---CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHH
Q 014172 97 VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPN---AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (429)
Q Consensus 97 ~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~---~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~ 173 (429)
+++|+.| | ..+|+++.+++.+.+ ..+.+. .+..++|++++++++ .+.+++++++|+|+++++..+++
T Consensus 5 ~~~~~~g-p-~~~~~~v~~a~~~~~----~~~~~~~~~~~~~~l~~~la~~~g----~~~~~~~v~~~~g~t~a~~~~~~ 74 (366)
T 1m32_A 5 YLLLTPG-P-LTTSRTVKEAMLFDS----CTWDDDYNIGVVEQIRQQLTALAT----ASEGYTSVLLQGSGSYAVEAVLG 74 (366)
T ss_dssp CEECSSS-S-CCCCHHHHHTTCCCC----CTTSHHHHTTTHHHHHHHHHHHHC----SSSSEEEEEEESCHHHHHHHHHH
T ss_pred cccccCC-C-cCCCHHHHHHHhhhh----cCCCHHHHHHHHHHHHHHHHHHhC----CCCcCcEEEEecChHHHHHHHHH
Confidence 6899999 4 457888988877642 122221 677899999999874 11234589999999999999999
Q ss_pred HhcCCCCEEEEcC-CCCCC-hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc--CCcEEEEcCCCCCccCCCCHHH
Q 014172 174 AVCSPGDEVIIPA-PFWVS-YPEMARIADATPVILPTRISENFLLDPKVLESKLTE--KSRLLILCSPSNPTGSVYPKNL 249 (429)
Q Consensus 174 ~l~~~gd~Vlv~~-p~y~~-~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--~~~~i~l~~p~NPtG~~~~~~~ 249 (429)
+++++||+|++.+ ++|+. +...++..|++++.++++. ++.+|++++++++++ ++++|++++|+||||.+++
T Consensus 75 ~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~--- 149 (366)
T 1m32_A 75 SALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGE--VARPDVQAIDAILNADPTISHIAMVHSETTTGMLNP--- 149 (366)
T ss_dssp HSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCT--TSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---
T ss_pred HhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhcCCCeEEEEEecccCCcceecC---
Confidence 9999999988776 66654 6677888999999999863 456899999999975 5889999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHh-
Q 014172 250 LDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ- 328 (429)
Q Consensus 250 l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~- 328 (429)
+++|.++|++| |+++|+||+|..... ...+ .. .+.++++.|+||.++ .+.++||+++++++++.+....
T Consensus 150 l~~i~~l~~~~-~~~li~Dea~~~~~~----~~~~---~~-~~~di~~~s~~K~~~-~~~g~G~~~~~~~~~~~~~~~~~ 219 (366)
T 1m32_A 150 IDEVGALAHRY-GKTYIVDAMSSFGGI----PMDI---AA-LHIDYLISSANKCIQ-GVPGFAFVIAREQKLAACKGHSR 219 (366)
T ss_dssp HHHHHHHHHHH-TCEEEEECTTTTTTS----CCCT---TT-TTCSEEEEESSSTTC-CCSSEEEEEEEHHHHTTCTTCCS
T ss_pred HHHHHHHHHHc-CCEEEEECCccccCc----Cccc---cc-cCccEEEecCccccc-CCCceEEEEECHHHHHhhcCCCC
Confidence 88999999999 999999999985321 1121 11 346799999999874 3345799999998876654310
Q ss_pred -----------------hcccCCCchHHHHHHHHHHhcCCCChHH--HHHHHHHHHHHHHHHHHHhccCCCceeecC---
Q 014172 329 -----------------SQFTSGASSISQKAGVAALGLGYAGGEV--VSKMVKAFRERRDFLVKSFGELEGVKMSEP--- 386 (429)
Q Consensus 329 -----------------~~~~~~~~~~~q~aa~~~l~~~~~~~~~--~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p--- 386 (429)
.....+++...+.++.++++. ..++ +++++++++++++++.+.|+++ |+++..+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~ 295 (366)
T 1m32_A 220 SLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKE---LAKEGGVAARHQRYQQNQRSLVAGMRAL-GFNTLLDDEL 295 (366)
T ss_dssp CSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHH---HHHHTHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGG
T ss_pred CccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHH---HHHccCHhHHHHHHHHHHHHHHHHHHHC-CCeeccCchh
Confidence 011245677777777778775 3344 6788999999999999999988 8877654
Q ss_pred CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 387 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+++++|++++...+ .+..+++++|.++ ||.+
T Consensus 296 ~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~-gi~v 327 (366)
T 1m32_A 296 HSPIITAFYSPEDPQ---------YRFSEFYRRLKEQ-GFVI 327 (366)
T ss_dssp BCSSEEEEECCCCTT---------CCHHHHHHHHHHT-TEEC
T ss_pred cCceEEEEEcCccCC---------CCHHHHHHHHHHC-CEEE
Confidence 467789999874100 2678999998877 8876
No 118
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.97 E-value=2.1e-30 Score=257.42 Aligned_cols=300 Identities=13% Similarity=0.088 Sum_probs=221.5
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCC---CCHH--HHHHHH-HHHHhhcCCCCCCCcEEEecChHHH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNA---GTLE--LRSAIC-HKLKEENGLSYTPDQILVSNGAKQS 167 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~-~~~~Y~~~~---G~~~--lr~~ia-~~l~~~~g~~~~~~~i~~t~G~~~a 167 (429)
.+.|+|..|.+++ |+.+.+++.+.+.+ ...+|+... |.+. ++++++ +++.+.+|. ++++|++++|+ ++
T Consensus 23 ~~~i~~~~~~~~~--~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~--~~~~i~~~sGt-~a 97 (407)
T 2dkj_A 23 REGLELIASENFV--SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGA--AWANVQPHSGS-QA 97 (407)
T ss_dssp HTSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC--SEEECCCSSHH-HH
T ss_pred hcceeeccCCCCC--CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCC--CcceEEecchH-HH
Confidence 4689999999887 88999999988764 334564332 5553 444433 566666674 44556667765 59
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCCCh---HHHHHHcCC--EEEEecCCCCCCCCCCHHHHHhhccc-CCcEEEEcCCCCCc
Q 014172 168 ILQAVLAVCSPGDEVIIPAPFWVSY---PEMARIADA--TPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPT 241 (429)
Q Consensus 168 l~~~l~~l~~~gd~Vlv~~p~y~~~---~~~~~~~g~--~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~p~NPt 241 (429)
+..++.+++++||+|++++|+|.++ ...++..|. .++.+++++ +++.+|++.+++.+++ ++++|++++|+||
T Consensus 98 ~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~v~~~~p~~~- 175 (407)
T 2dkj_A 98 NMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRP-DTELIDLEEVRRLALEHRPKVIVAGASAYP- 175 (407)
T ss_dssp HHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCT-TTSSCCHHHHHHHHHHHCCSEEEECCSSCC-
T ss_pred HHHHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCc-ccCccCHHHHHHHHhhcCCeEEEEeccccC-
Confidence 9999999999999999999999988 345556666 455554432 3577999999999975 8999999999997
Q ss_pred cCCCCHHHHHHHHHHHHhCCCeEEEEccCCcc-cccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcC-HH
Q 014172 242 GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KH 319 (429)
Q Consensus 242 G~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~-~~ 319 (429)
.+.+ +++|.++|++| |+++|+||+|.. +.+.+... +. + ...++++.||||.+ +|+|+||++++ ++
T Consensus 176 -~~~~---l~~i~~l~~~~-~~~li~Dea~~~g~~~~~~~~-~~--~---~~~di~~~s~sK~l--~g~~~G~~~~~~~~ 242 (407)
T 2dkj_A 176 -RFWD---FKAFREIADEV-GAYLVVDMAHFAGLVAAGLHP-NP--L---PYAHVVTSTTHKTL--RGPRGGLILSNDPE 242 (407)
T ss_dssp -SCCC---HHHHHHHHHHH-TCEEEEECTTTHHHHHTTCSC-CC--T---TTCSEEEEESSGGG--CCCSCEEEEESCHH
T ss_pred -CCCC---HHHHHHHHHHc-CCEEEEEccccccccccCccC-Cc--c---ccccEEEEeccccC--CCCCceEEEECCHH
Confidence 6667 89999999999 999999999997 55444221 11 1 12568999999955 68999999999 89
Q ss_pred HHHHHHHHhhcccCCCchHHHH-HHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeec-CCceEEEEEecC
Q 014172 320 FVAACNKIQSQFTSGASSISQK-AGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-PQGAFYLFIDFS 397 (429)
Q Consensus 320 ~~~~l~~~~~~~~~~~~~~~q~-aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~-p~~~~~~~~~l~ 397 (429)
+++.+......+..+.+...+. ++.++++.. ..+++++++++++++++++.+.|+++ |+++.. +..++|+|++++
T Consensus 243 ~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~ 319 (407)
T 2dkj_A 243 LGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEA--LQPEFKEYSRLVVENAKRLAEELARR-GYRIVTGGTDNHLFLVDLR 319 (407)
T ss_dssp HHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHH--HSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECG
T ss_pred HHHHHHhhhcccccCCCcHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHhC-CceeecCCCCceEEEEECc
Confidence 9998887665554444444333 555666541 13678899999999999999999998 888775 456778999987
Q ss_pred CccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 398 TYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.. + .+..++.+.|.+ +||.+
T Consensus 320 ~~-~---------~~~~~~~~~l~~-~gi~v 339 (407)
T 2dkj_A 320 PK-G---------LTGKEAEERLDA-VGITV 339 (407)
T ss_dssp GG-T---------CCHHHHHHHHHH-TTEEC
T ss_pred cc-C---------CCHHHHHHHHHH-cCcee
Confidence 42 0 257788888754 59875
No 119
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.97 E-value=1.5e-30 Score=263.48 Aligned_cols=333 Identities=16% Similarity=0.167 Sum_probs=235.0
Q ss_pred cccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCC------CCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Q 014172 69 SPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP------DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAIC 142 (429)
Q Consensus 69 s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~------~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia 142 (429)
..|++.++++.+..+.+++..+...|.++++|..|++ ++.+ +.+.+++.+.+..+...|++..+..+|+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ylD~~~~~~~-~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la 86 (467)
T 1ax4_A 8 PFRIKMVEKIRVPSREEREAALKEAGYNPFLLPSSAVYIDLLTDSGT-NAMSDHQWAAMITGDEAYAGSRNYYDLKDKAK 86 (467)
T ss_dssp SEEEEEEEECCCCCHHHHHHHHHHTTSCGGGSCGGGCSEECSCSSSC-CCEEHHHHHHHHTCCCCSSSCHHHHHHHHHHH
T ss_pred hhhhceeecccccchhHHHHHHHhcCcCcccCCCCceeeecccCcCC-HHHHHHHHHHHhhcccccccCccHHHHHHHHH
Confidence 3566777777776777777777777877888887765 2222 56777777777666667888788899999999
Q ss_pred HHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcC----CCCE---EEEcCCCCCChHHHHHHcCCEEEEecCCCC----
Q 014172 143 HKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS----PGDE---VIIPAPFWVSYPEMARIADATPVILPTRIS---- 211 (429)
Q Consensus 143 ~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~----~gd~---Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~---- 211 (429)
+++. .++|++|+|+++++..++.++++ +||+ |+++.+.|..+...+...|++++.++....
T Consensus 87 ~~~~--------~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 158 (467)
T 1ax4_A 87 ELFN--------YDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSE 158 (467)
T ss_dssp HHHC--------CCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTT
T ss_pred HHcC--------CCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEeccccchhhHHHhccCCceeccccccccccc
Confidence 9973 36899999999999999999998 9998 999877777778888999999988765321
Q ss_pred ----CCCCCCHHHHHhhccc----CCcEEEEcCCCCCc-cCCCCHHHHHHHHHHHHhCCCeEEEEccCCcc--c------
Q 014172 212 ----ENFLLDPKVLESKLTE----KSRLLILCSPSNPT-GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH--I------ 274 (429)
Q Consensus 212 ----~~~~~d~e~l~~~l~~----~~~~i~l~~p~NPt-G~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~--~------ 274 (429)
.++.+|+++|++++++ ++++|++++||||| |.+++.+++++|.++|++| |+++|+|+++.. .
T Consensus 159 ~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~-gi~li~De~~~~~~~~~~~~~ 237 (467)
T 1ax4_A 159 TYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQH-GIFVVMDSARFCENAYFIKAR 237 (467)
T ss_dssp SCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHH-TCCEEEECTTHHHHHHHHHHH
T ss_pred ccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHc-CCEEEEEchhhhhcchhcccc
Confidence 1346899999999974 68999999999999 8999999999999999999 999999998653 1
Q ss_pred --ccCCCCCCccccCC----CCCCceEEEeccChhcccc-cceeeEEEcC-H-HHHHHHHHHhhcc----cC-CCchHHH
Q 014172 275 --IYAPATHTSFASLP----GMWERTLTVNGFSKAFAMT-GWRLGYIAGP-K-HFVAACNKIQSQF----TS-GASSISQ 340 (429)
Q Consensus 275 --~~~~~~~~~~~~~~----~~~~~~i~~~S~SK~~~~~-G~R~G~v~~~-~-~~~~~l~~~~~~~----~~-~~~~~~q 340 (429)
.+.+. ++..+. ...+ +++.|+||.+|++ | ||++++ + ++++.+......+ .. ..+...+
T Consensus 238 ~~~~~~~---~~~~~~~~~~~~~d--~~~~s~sK~~g~~~G---g~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (467)
T 1ax4_A 238 DPKYKNA---TIKEVIFDMYKYAD--ALTMSAKKDPLLNIG---GLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDM 309 (467)
T ss_dssp CGGGTTC---CHHHHHHHHGGGCS--EEEEETTSTTCCSSC---EEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCHHHH
T ss_pred ccccCCC---chhhhhhhhccccc--eEEEeccccCCCCcc---eEEEeCCHHHHHHHHHhhccccccccccCCccchHH
Confidence 12221 222211 1112 5678999999866 4 777777 6 8888776553321 11 2233333
Q ss_pred HHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHH
Q 014172 341 KAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYL 420 (429)
Q Consensus 341 ~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L 420 (429)
.++..+++... .++.+ +...++++++.+.|++ +|+++..|.+++++|+++....... .. ...+..+++++|
T Consensus 310 ~a~~~~l~~~~-~~~~~----~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~l~~~L 380 (467)
T 1ax4_A 310 AAMVQGLEEGT-EEEYL----HYRIGQVKYLGDRLRE-AGIPIQYPTGGHAVFVDCKKLVPQI-PG--DQFPAQAVINAL 380 (467)
T ss_dssp HHHHHHHHHTT-CHHHH----HHHHHHHHHHHHHHHH-TTCCBCSSCCSSEEEEESTTTCTTS-CG--GGCHHHHHHHHH
T ss_pred HHHHHHHHHhh-hhhHH----HHHHHHHHHHHHHHHh-CCCCcccCCCceEEEEehhhhcccc-cc--CCCCHHHHHHHH
Confidence 33333454311 11222 3334667888888887 4888878899999999943210000 00 002467899999
Q ss_pred HHhCCeec
Q 014172 421 LDKAQVLL 428 (429)
Q Consensus 421 l~~~gV~v 428 (429)
+++.||.+
T Consensus 381 ~~~~gv~v 388 (467)
T 1ax4_A 381 YLESGVRA 388 (467)
T ss_dssp HHHHCEEC
T ss_pred HHhcCcee
Confidence 66669986
No 120
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.97 E-value=2.8e-30 Score=256.08 Aligned_cols=297 Identities=12% Similarity=0.112 Sum_probs=218.6
Q ss_pred cCCCeEEcCCCC--CCCC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.++|++.|. .+++ .|+++.+++.+.+..... ++. ....++++.+++.+.+.+| .++|++|+|+++++.
T Consensus 38 ~g~~~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~-~~~-~~~~~~~~~l~~~la~~~g----~~~v~~~~gg~~a~~ 111 (397)
T 2ord_A 38 KGNAYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKLIH-CSN-LFWNRPQMELAELLSKNTF----GGKVFFANTGTEANE 111 (397)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCSC-CCT-TSEEHHHHHHHHHHHHTTT----SCEEEEESSHHHHHH
T ss_pred CCCEEEECCccccccccCCCCHHHHHHHHHHHHhccc-Ccc-ccCCHHHHHHHHHHHHhcC----CCeEEEeCCHHHHHH
Confidence 356789998873 3333 478999999998875322 211 1123566666666666655 479999999999999
Q ss_pred HHHHHhcC------C-CCEEEEcCCCCCC-hHHHHHHcCCE------------EEEecCCCCCCCCCCHHHHHhhcccCC
Q 014172 170 QAVLAVCS------P-GDEVIIPAPFWVS-YPEMARIADAT------------PVILPTRISENFLLDPKVLESKLTEKS 229 (429)
Q Consensus 170 ~~l~~l~~------~-gd~Vlv~~p~y~~-~~~~~~~~g~~------------~~~v~~~~~~~~~~d~e~l~~~l~~~~ 229 (429)
.+++++.. + ++.|++.+|+|.+ +...++..|.+ ++.++. .|+++|++++++++
T Consensus 112 ~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~l~~~~ 184 (397)
T 2ord_A 112 AAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRKMSEDV 184 (397)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-------TCHHHHHHHCCTTE
T ss_pred HHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-------CCHHHHHHHhhcCe
Confidence 99998863 5 4789999999965 44577788876 667764 28999999999899
Q ss_pred cEEEEcCCCCCccC-CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccccc
Q 014172 230 RLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG 308 (429)
Q Consensus 230 ~~i~l~~p~NPtG~-~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 308 (429)
++|++++|+||||. +++.+++++|.++|++| |+++|+||+|.++.+.+. ..++..+....+ +.||||.++ +|
T Consensus 185 ~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~-~~~li~De~~~~~~~~g~-~~~~~~~~~~~d----~~s~sK~~~-~G 257 (397)
T 2ord_A 185 CAVFLEPIQGESGIVPATKEFLEEARKLCDEY-DALLVFDEVQCGMGRTGK-LFAYQKYGVVPD----VLTTAKGLG-GG 257 (397)
T ss_dssp EEEEECSEECTTTCEECCHHHHHHHHHHHHHH-TCEEEEECTTTTTTTTSS-SSHHHHHTCCCS----EEEECGGGG-TT
T ss_pred EEEEEecccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEEecccCCccCcc-chhhhhhCCCCC----eeeeccccC-CC
Confidence 99999999999999 99999999999999999 999999999998766543 222222221112 238899999 99
Q ss_pred ceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC----CCceee
Q 014172 309 WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL----EGVKMS 384 (429)
Q Consensus 309 ~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l----~g~~~~ 384 (429)
+|+||++++++++ .+.......+++.+.+.+.++.++|+.. .+ ++++++++++++++.+.|+++ +.+...
T Consensus 258 ~r~G~~~~~~~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 331 (397)
T 2ord_A 258 VPIGAVIVNERAN-VLEPGDHGTTFGGNPLACRAGVTVIKEL---TK--EGFLEEVEEKGNYLMKKLQEMKEEYDVVADV 331 (397)
T ss_dssp SCCEEEEECSTTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHH---TS--TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred cCeEEEEEchHhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHH---Hh--CCHHHHHHHHHHHHHHHHHHHHHhCCceEEE
Confidence 9999999998876 5543233445567899999999888751 22 456788888888888888764 222223
Q ss_pred cCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 385 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 385 ~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++.+ .|+|++++.. .+..+++++|+++ ||.+
T Consensus 332 ~~~g-~~~~~~~~~~-----------~~~~~l~~~l~~~-gi~v 362 (397)
T 2ord_A 332 RGMG-LMIGIQFREE-----------VSNREVATKCFEN-KLLV 362 (397)
T ss_dssp EEET-TEEEEEECTT-----------SCHHHHHHHHHHT-TEEC
T ss_pred EEEe-EEEEEEECCh-----------HHHHHHHHHHHHC-CCEE
Confidence 4444 5577888642 2578999999874 9876
No 121
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.97 E-value=8e-30 Score=253.41 Aligned_cols=286 Identities=14% Similarity=0.140 Sum_probs=219.8
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCEEEE
Q 014172 106 DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVII 184 (429)
Q Consensus 106 ~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~gd~Vlv 184 (429)
+.++++.+.+++.+.+ ...|. ....++.+.+.+++.+.+|. +.+ .|++|+|+++++..++.+++++||+|++
T Consensus 21 p~~~~~~v~~a~~~~~---~~~~~--~~~~~~~~~~~~~la~~~~~--~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~ 93 (411)
T 3nnk_A 21 PINADPRVLRAMSSQL---IGQYD--PAMTHYMNEVMALYRGVFRT--ENRWTMLVDGTSRAGIEAILVSAIRPGDKVLV 93 (411)
T ss_dssp CCCCCHHHHHHHTSCC---CCTTC--HHHHHHHHHHHHHHHHHHTC--CCSEEEEEESCHHHHHHHHHHHHCCTTCEEEE
T ss_pred CCCCCHHHHHHhhccc---ccccc--HHHHHHHHHHHHHHHHHhCC--CCCcEEEECCCcHHHHHHHHHHhcCCCCEEEE
Confidence 4556788887776432 12232 22345556666666666664 344 4889999999999999999999999999
Q ss_pred cCCCCCC--hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCC
Q 014172 185 PAPFWVS--YPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP 261 (429)
Q Consensus 185 ~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~ 261 (429)
+.|+|.+ +...++..|++++.+|++ .++.+|+++|++++++ ++++|++++|+||||.+++ +++|.++|++|
T Consensus 94 ~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~- 167 (411)
T 3nnk_A 94 PVFGRFGHLLCEIARRCRAEVHTIEVP--WGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQP---LAELGEICRRY- 167 (411)
T ss_dssp EECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHH-
T ss_pred ecCCchHHHHHHHHHHcCCeEEEEecC--CCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceecc---HHHHHHHHHHc-
Confidence 9999987 888999999999999985 3466899999999986 8999999999999999999 88999999999
Q ss_pred CeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHh-------------
Q 014172 262 RLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ------------- 328 (429)
Q Consensus 262 ~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~------------- 328 (429)
|+++|+||+|.... ....+. ..+.++++.|++|.++ .+.++||+++++++++.+....
T Consensus 168 ~~~li~Dea~~~~~----~~~~~~----~~~~d~~~~s~~K~l~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~g 238 (411)
T 3nnk_A 168 DALFYTDATASLGG----NPLETD----VWGLDAVSAGMQKCLG-GPSGTSPITLSARMEEAIRRRKCVEEGIRTDAHRD 238 (411)
T ss_dssp TCEEEEECTTTBTT----BCCCTT----TTTCSEEECCSTTTTC-CCSSEEEEEECHHHHHHHHTTCCCCGGGCCTTCCC
T ss_pred CCEEEEECCcccCC----cccchh----ccCCcEEEecCccccC-CCCceEEEEECHHHHHHHhhccccccccccccccc
Confidence 99999999987521 111111 1356699999999854 4456899999999998887543
Q ss_pred -----------------------hcccCCCchHHHHHHHHHHhcCCCChHH-HHHHHHHHHHHHHHHHHHhccCCCceee
Q 014172 329 -----------------------SQFTSGASSISQKAGVAALGLGYAGGEV-VSKMVKAFRERRDFLVKSFGELEGVKMS 384 (429)
Q Consensus 329 -----------------------~~~~~~~~~~~q~aa~~~l~~~~~~~~~-~~~~~~~~~~~r~~l~~~L~~l~g~~~~ 384 (429)
.....+.+...+.++.++++. ..++ +++++++++++++++.+.|+++ |+++.
T Consensus 239 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 314 (411)
T 3nnk_A 239 GDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARL---ILQEGLDYGIARHKLHGDALVKGIQAM-GLETF 314 (411)
T ss_dssp CSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBC
T ss_pred ccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHH---HHHhhHHHHHHHHHHHHHHHHHHHHHc-CCEeC
Confidence 012234566777777777765 3444 7889999999999999999998 88877
Q ss_pred cCCc---eEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 385 EPQG---AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 385 ~p~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+.+ ++++++.++.. .+..+++++|++++||.+
T Consensus 315 ~~~~~~~~~~~~~~~~~~-----------~~~~~l~~~l~~~~gi~v 350 (411)
T 3nnk_A 315 GDLKHKMNNVLGVVIPQG-----------INGDQARKLMLEDFGIEI 350 (411)
T ss_dssp SCGGGBCSSEEEEECCTT-----------CCHHHHHHHHHHHHSEEE
T ss_pred CCcccccccEEEEECCCC-----------CCHHHHHHHHHHhcCeEE
Confidence 6554 66788888742 368899999998889875
No 122
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.97 E-value=6.7e-30 Score=248.93 Aligned_cols=292 Identities=12% Similarity=0.055 Sum_probs=211.5
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 174 (429)
+++|+|+.+.+ ..+++++.+++.+.+......|+ ..++++++++++.+.+| .+++|++|+|+++++..++++
T Consensus 7 ~~~id~~~~~~-~~~~~~v~~a~~~~~~~~~~~~~----~~~~~~~l~~~la~~~g---~~~~v~~~~~gt~a~~~al~~ 78 (356)
T 1v72_A 7 PPALGFSSDNI-AGASPEVAQALVKHSSGQAGPYG----TDELTAQVKRKFCEIFE---RDVEVFLVPTGTAANALCLSA 78 (356)
T ss_dssp CCCCBCSCGGG-CCCCHHHHHHHHHTTSSCCCSTT----CSHHHHHHHHHHHHHHT---SCCEEEEESCHHHHHHHHHHT
T ss_pred CceEeeccCCc-cCCCHHHHHHHHhhccCcccccc----cchHHHHHHHHHHHHhC---CCCcEEEeCCccHHHHHHHHH
Confidence 46899998755 45678899998876522123343 34556666666666666 245699999999999999999
Q ss_pred hcCCCCEEEEcCCCCCChHHH--HHHc--CCEEEEecCCCCCCCCCCHHHHHh-hccc-------CCcEEEEcCCCCCcc
Q 014172 175 VCSPGDEVIIPAPFWVSYPEM--ARIA--DATPVILPTRISENFLLDPKVLES-KLTE-------KSRLLILCSPSNPTG 242 (429)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~~--~~~~--g~~~~~v~~~~~~~~~~d~e~l~~-~l~~-------~~~~i~l~~p~NPtG 242 (429)
++++||.|+++.|+|..+... +... |++++.+|.+ ++.+|+++|++ ++++ ++++|++++|+| ||
T Consensus 79 ~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG 154 (356)
T 1v72_A 79 MTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VG 154 (356)
T ss_dssp SCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TS
T ss_pred hcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC---CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CC
Confidence 999999999999998776554 6666 9999999874 35689999999 8875 688999999987 99
Q ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEccCCcccc--cCCCCCCccccCCCCCCceEEEeccChhcccccceee--EEEcCH
Q 014172 243 SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII--YAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLG--YIAGPK 318 (429)
Q Consensus 243 ~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~--~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G--~v~~~~ 318 (429)
.+++.+++++|.++|++| |+++|+|++|..+. +.+... ....+.. +..+++.|+||. + +|+| |+++++
T Consensus 155 ~~~~~~~l~~i~~~~~~~-~~~li~D~a~~~~~~~~~~~~~-~~~~~~~--~~d~~~~s~sK~-g---~~~G~g~~~~~~ 226 (356)
T 1v72_A 155 SIYTLDEIEAIGDVCKSS-SLGLHMDGSRFANALVSLGCSP-AEMTWKA--GVDALSFGATKN-G---VLAAEAIVLFNT 226 (356)
T ss_dssp CCCCHHHHHHHHHHHHHT-TCEEEEEETTHHHHHHHHTCCT-TTTTGGG--TCCEEEECCGGG-T---CSSCEEEEESSG
T ss_pred ccCCHHHHHHHHHHHHHc-CCeEEEEchhhHhHhccCCCCH-HHhhhhh--cCCEEEEecccC-C---CcCccEEEEECH
Confidence 999999999999999999 99999999998642 222211 1111111 222556699998 4 3555 888899
Q ss_pred HHHHHHHHHhhcccC-CC-chHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEec
Q 014172 319 HFVAACNKIQSQFTS-GA-SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDF 396 (429)
Q Consensus 319 ~~~~~l~~~~~~~~~-~~-~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l 396 (429)
++++.+.......+. .. ....+..+...+.. +...++.++++++++++.+.|++++|+++..|.+++|+|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~ 301 (356)
T 1v72_A 227 SLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTD-----DLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRL 301 (356)
T ss_dssp GGHHHHHHHHHHTTCCCSSTHHHHHHHHHHTST-----THHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEE
T ss_pred HHHhhHHHHhhccCchhhhHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEEc
Confidence 998887665432221 11 22333323333332 234456777888999999999988899987788888899987
Q ss_pred CCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 397 STYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+ .+++++|.++ ||.+
T Consensus 302 ~----------------~~~~~~l~~~-gi~v 316 (356)
T 1v72_A 302 D----------------SAMIDALLKA-GFGF 316 (356)
T ss_dssp C----------------HHHHHHHHHT-TCBC
T ss_pred C----------------HHHHHHHHhc-CeEE
Confidence 4 2788888655 8875
No 123
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.97 E-value=3e-29 Score=249.65 Aligned_cols=286 Identities=13% Similarity=0.146 Sum_probs=217.5
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEE-EecChHHHHHHHHHHhcCCCCEEEE
Q 014172 106 DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQIL-VSNGAKQSILQAVLAVCSPGDEVII 184 (429)
Q Consensus 106 ~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~-~t~G~~~al~~~l~~l~~~gd~Vlv 184 (429)
+.+.++.+.+++.+. ....|+ ....++.+.+.+++.+.+|. ++++++ +++|+++++..++++++++||+|++
T Consensus 19 p~~~~~~v~~a~~~~---~~~~~~--~~~~~~~~~l~~~la~~~g~--~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~ 91 (416)
T 3isl_A 19 PVEVDPRVLRVMSTP---VVGQFD--PAFTGIMNETMEMLRELFQT--KNRWAYPIDGTSRAGIEAVLASVIEPEDDVLI 91 (416)
T ss_dssp SCCCCHHHHHHTTSC---CCCTTS--HHHHHHHHHHHHHHHHHTTC--CCSEEEEEESCHHHHHHHHHHHHCCTTCEEEE
T ss_pred CcCcCHHHHHHhccc---CCCCcc--HHHHHHHHHHHHHHHHHhCC--CCCcEEEecCcHHHHHHHHHHHhcCCCCEEEE
Confidence 344566776665441 122332 22345566666666666673 455555 8889999999999999999999999
Q ss_pred cCCCCCC--hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc-cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCC
Q 014172 185 PAPFWVS--YPEMARIADATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP 261 (429)
Q Consensus 185 ~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~-~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~ 261 (429)
++|+|.+ +...++..|++++.++++.+ +.+|+++++++++ +++++|++++|+||||.+++ +++|.++|++|
T Consensus 92 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~- 165 (416)
T 3isl_A 92 PIYGRFGYLLTEIAERYGANVHMLECEWG--TVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHP---LKAIGEACRTE- 165 (416)
T ss_dssp EESSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CHHHHHHHHHT-
T ss_pred ecCCcccHHHHHHHHhcCCeeEEEecCCC--CCCCHHHHHHHHhhCCCcEEEEEccCCCCceecC---HHHHHHHHHHc-
Confidence 9999987 77788999999999998643 4689999999998 68999999999999999999 88999999999
Q ss_pred CeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHh-------------
Q 014172 262 RLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ------------- 328 (429)
Q Consensus 262 ~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~------------- 328 (429)
|+++|+|++|.... ....+. ..+.++++.|++|.++ .+.++||+++++++++.+....
T Consensus 166 ~~~li~D~a~~~~~----~~~~~~----~~~~d~~~~s~~K~l~-g~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~ 236 (416)
T 3isl_A 166 DALFIVDAVATIGG----CEVKVD----EWKIDAAIGGTQKCLS-VPSGMAPITYNERVADVIAARKKVERGIATQADRA 236 (416)
T ss_dssp TCEEEEECTTTTTT----SCCCTT----TTTCSEEECCSSSTTC-CCSSEEEEEECHHHHHHHHTC--------------
T ss_pred CCEEEEECCccccC----CCcchh----hcCCCEEEecCccccC-CCCCeEEEEECHHHHHHhhccccccccccccccch
Confidence 99999999987422 111111 1346699999999754 4456899999999988876321
Q ss_pred -------------------------hcccCCCchHHHHHHHHHHhcCCCChHH-HHHHHHHHHHHHHHHHHHhccCCCce
Q 014172 329 -------------------------SQFTSGASSISQKAGVAALGLGYAGGEV-VSKMVKAFRERRDFLVKSFGELEGVK 382 (429)
Q Consensus 329 -------------------------~~~~~~~~~~~q~aa~~~l~~~~~~~~~-~~~~~~~~~~~r~~l~~~L~~l~g~~ 382 (429)
.....+++...+.++.++++. ..++ +++++++++++++++.+.|+++ |++
T Consensus 237 ~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~ 312 (416)
T 3isl_A 237 ALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRL---VLEEGLETRFERHRHHEAALAAGIKAM-GLR 312 (416)
T ss_dssp ----CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred hccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHH---HHHhhHHHHHHHHHHHHHHHHHHHHHc-CCE
Confidence 111234567777777777765 3455 8899999999999999999997 888
Q ss_pred eecCCc---eEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 383 MSEPQG---AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 383 ~~~p~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+..+.+ ++++++.++.. .+..+++++|++++||.+
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~-----------~~~~~l~~~L~~~~gi~v 350 (416)
T 3isl_A 313 LFGDDSCKMPVVTCVEIPGG-----------IDGESVRDMLLAQFGIEI 350 (416)
T ss_dssp BCSCGGGBCTTEEEEECCTT-----------CCHHHHHHHHHHHHCEEC
T ss_pred eccCccccCCcEEEEeCCCC-----------CCHHHHHHHHHHhCCEEE
Confidence 876654 56688888642 368899999998878876
No 124
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.97 E-value=2.1e-30 Score=251.89 Aligned_cols=282 Identities=16% Similarity=0.149 Sum_probs=212.7
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCCCC--CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEE
Q 014172 106 DFDTPVLIAEAGINAIREGFTRYTPN--AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVI 183 (429)
Q Consensus 106 ~~~~p~~v~~a~~~~~~~~~~~Y~~~--~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vl 183 (429)
+.++|+.+.+++.+.+.. +.| +. .+..++++++++++ |.+.++++|++|+|+++++..+++++++ |+|+
T Consensus 8 p~~~~~~v~~a~~~~~~~--~~~-~~~~~~~~~l~~~la~~~----g~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl 78 (353)
T 2yrr_A 8 PTPIPERVQKALLRPMRG--HLD-PEVLRVNRAIQERLAALF----DPGEGALVAALAGSGSLGMEAGLANLDR--GPVL 78 (353)
T ss_dssp SCCCCHHHHGGGGSCCCC--TTC-HHHHHHHHHHHHHHHHHH----CCCTTCEEEEESSCHHHHHHHHHHTCSC--CCEE
T ss_pred CCCCCHHHHHHHhccccc--ccC-HHHHHHHHHHHHHHHHHh----CCCCCCceEEEcCCcHHHHHHHHHHhcC--CcEE
Confidence 455678888888766532 222 21 23455666666654 5444568899999999999999999886 8999
Q ss_pred EcCCCCCCh--HHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhC
Q 014172 184 IPAPFWVSY--PEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 260 (429)
Q Consensus 184 v~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~ 260 (429)
+++|.|+++ ...++..|++++.++++. ++.+|++.+++.+++ ++++|++++|+||||.+++ +++|.++|++|
T Consensus 79 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~ 153 (353)
T 2yrr_A 79 VLVNGAFSQRVAEMAALHGLDPEVLDFPP--GEPVDPEAVARALKRRRYRMVALVHGETSTGVLNP---AEAIGALAKEA 153 (353)
T ss_dssp EEECSHHHHHHHHHHHHTTCCEEEEECCT--TSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHHHHHHH
T ss_pred EEcCCCchHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecC---HHHHHHHHHHc
Confidence 999998875 456678899999999864 456899999999988 8999999999999999999 88999999999
Q ss_pred CCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhc-ccccceeeEEEcCHHHHHHHHH-------------
Q 014172 261 PRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF-AMTGWRLGYIAGPKHFVAACNK------------- 326 (429)
Q Consensus 261 ~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~R~G~v~~~~~~~~~l~~------------- 326 (429)
|+++|+|++|+.. ....++..+ +..+++.|++|.+ +++| +||+++++++++.+..
T Consensus 154 -~~~li~D~a~~~~----~~~~~~~~~----~~d~~~~s~~K~~~~~~g--~G~~~~~~~~~~~l~~~~~~~~~~~~~~~ 222 (353)
T 2yrr_A 154 -GALFFLDAVTTLG----MLPFSMRAM----GVDYAFTGSQKCLSAPPG--LAPIAASLEARKAFTGKRGWYLDLARVAE 222 (353)
T ss_dssp -TCEEEEECTTTTT----TSCCCHHHH----TCSEEECCTTSTTCCCSS--CEEEEECHHHHHHCCCCSCSTTCHHHHHH
T ss_pred -CCeEEEEcCcccc----ccccccccc----CceEEEecCcccccCCCc--eEEEEECHHHHHHhccCCCccccHHHHhh
Confidence 9999999999642 112222222 3458899999965 4455 7999999998876531
Q ss_pred H--hhcccCCCchHHHHHHHHHHhcCCCChHH-HHHHHHHHHHHHHHHHHHhccCCCceeecCC--ceEEEEEecCCccC
Q 014172 327 I--QSQFTSGASSISQKAGVAALGLGYAGGEV-VSKMVKAFRERRDFLVKSFGELEGVKMSEPQ--GAFYLFIDFSTYYG 401 (429)
Q Consensus 327 ~--~~~~~~~~~~~~q~aa~~~l~~~~~~~~~-~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~--~~~~~~~~l~~~~~ 401 (429)
. ......+++...+.++.++++. ..++ +++++++++++++++.+.|+++ |+++..+. +++++|++++..
T Consensus 223 ~~~~~~~~~~~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-- 296 (353)
T 2yrr_A 223 HWERGGYHHTTPVLLHYALLEALDL---VLEEGVAARERRAREVYAWVLEELKAR-GFRPYPKASPLPTVLVVRPPEG-- 296 (353)
T ss_dssp HHTTCCCSSCCCHHHHHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEESCSSSBCTTEEEEECCTT--
T ss_pred hhhcCCCCCCCCHHHHHHHHHHHHH---HHHhhHHHHHHHHHHHHHHHHHHHHHC-CCccccCccCCCeEEEEECCCC--
Confidence 0 1222335677777777777764 2333 7788999999999999999998 88887654 677778888632
Q ss_pred CcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 402 SEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+..+++++|.++ ||.+
T Consensus 297 ---------~~~~~~~~~l~~~-gi~v 313 (353)
T 2yrr_A 297 ---------VDADRLVRALYAE-GVAV 313 (353)
T ss_dssp ---------CCHHHHHHHHHHT-TEEC
T ss_pred ---------CCHHHHHHHHHHC-CEEE
Confidence 2678999998877 9876
No 125
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.97 E-value=2.5e-29 Score=252.08 Aligned_cols=322 Identities=12% Similarity=0.074 Sum_probs=211.2
Q ss_pred cCCCeEEcCCC--CCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAG--EPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g--~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.++|++.| .+.++. |+++.+++.+.+.+. ..|++..+..++++++++++.+.++ .++++|++|+|+++++.
T Consensus 27 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ea~~ 103 (430)
T 3i4j_A 27 AGRRYLDGSSGALVANIGHGRAEVGERMAAQAARL-PFVHGSQFSSDVLEEYAGRLARFVG--LPTFRFWAVSGGSEATE 103 (430)
T ss_dssp TSCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHC-CCCCTTTCEEHHHHHHHHHHHHHTT--CTTCEEEEESSHHHHHH
T ss_pred CCCEEEECCCchhccccCCCCHHHHHHHHHHHHhc-ccccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCcHHHHHH
Confidence 46678999987 455555 899999999988763 3454556677889999999988877 45679999999999999
Q ss_pred HHHHHhc--------CCCCEEEEcCCCCCChHHHHHHcCCE---------------EEEecCCCC-CCCCCCHHHHHhhc
Q 014172 170 QAVLAVC--------SPGDEVIIPAPFWVSYPEMARIADAT---------------PVILPTRIS-ENFLLDPKVLESKL 225 (429)
Q Consensus 170 ~~l~~l~--------~~gd~Vlv~~p~y~~~~~~~~~~g~~---------------~~~v~~~~~-~~~~~d~e~l~~~l 225 (429)
.++++++ ..+|.|++.+|+|+++...+...+.. +..++.+.. .....|++.|++++
T Consensus 104 ~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l 183 (430)
T 3i4j_A 104 SAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALL 183 (430)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHH
Confidence 9999886 34789999999999988765554442 222222100 00113568888888
Q ss_pred c----cCCcEEEEcCCCC-CccC-CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEec
Q 014172 226 T----EKSRLLILCSPSN-PTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNG 299 (429)
Q Consensus 226 ~----~~~~~i~l~~p~N-PtG~-~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S 299 (429)
+ +++++|+++.++| ++|. +.+.+++++|.++|++| |+++|+||+|.++.+.+. ...+..+++.... +.+
T Consensus 184 ~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~-~~~li~DEv~~~~~~~g~-~~~~~~~~~~~~d---i~t 258 (430)
T 3i4j_A 184 EREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEA-GIIFIADEVMSGMGRCGS-PLALSRWSGVTPD---IAV 258 (430)
T ss_dssp HHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHH-TCEEEEECTTTTTTTTSS-SSGGGGTTTCCCS---EEE
T ss_pred HhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCcccc-hhhhhhhcCCCCc---EEE
Confidence 6 3344444545566 8886 66888899999999999 999999999998766553 2222222011122 446
Q ss_pred cChhccccc-ceeeEEEcCHHHHHHHHHH----hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHH
Q 014172 300 FSKAFAMTG-WRLGYIAGPKHFVAACNKI----QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKS 374 (429)
Q Consensus 300 ~SK~~~~~G-~R~G~v~~~~~~~~~l~~~----~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~ 374 (429)
|||.++ .| +|+||+++++++++.+... ....+++.+.++|.++.++|+... .++.+++.++..+..++.+.+.
T Consensus 259 ~sK~l~-~G~~r~G~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~-~~~~~~~~~~~~~~~~~~l~~~ 336 (430)
T 3i4j_A 259 LGKGLA-AGYAPLAGLLAAPQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVE-REDLTGAAKERGAQLLAGLQAL 336 (430)
T ss_dssp ECGGGT-TTSSCCEEEEECHHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHHH
T ss_pred Eccccc-CCccccEEEEECHHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHH-cccHHHHHHHHHHHHHHHHHHH
Confidence 999999 69 9999999999999998864 344556789999999999997411 0234555555555556666665
Q ss_pred hccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 375 FGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 375 L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.+++++...++.|.| +++.+.+.... ..+.......++++.|+++ ||.+
T Consensus 337 ~~~~~~~~~~~~~g~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~-Gv~v 386 (430)
T 3i4j_A 337 QARFPQMMQVRGTGLL-LGVVLGDLATG--QAFETPGIASRIGAAALKR-GLIT 386 (430)
T ss_dssp HHHCTTEEEEEEETTE-EEEEEC--------------CHHHHHHHHHHT-TEEC
T ss_pred HHhCCCeEEEEEEEEE-EEEEecccccc--CCCccHHHHHHHHHHHHhC-CCEE
Confidence 5566777777777765 66666431000 0000001247899998866 8876
No 126
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.97 E-value=1.5e-29 Score=249.61 Aligned_cols=291 Identities=16% Similarity=0.133 Sum_probs=216.7
Q ss_pred CCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEE
Q 014172 103 GEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEV 182 (429)
Q Consensus 103 g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~V 182 (429)
+..+.++|+.+.+++.+.+ ...|.+ +..++.+.+.+++.+.+|.+ .+++|++|+|+++++..++++++++||+|
T Consensus 28 ~p~p~~~~~~v~~a~~~~~---~~~~~~--~~~~~~~~l~~~la~~~~~~-~~~~v~~~~gg~~al~~~~~~~~~~gd~v 101 (393)
T 3kgw_A 28 GPGPSNLAPRVLAAGSLRM---IGHMQK--EMLQIMEEIKQGIQYVFQTR-NPLTLVVSGSGHCAMETALFNLLEPGDSF 101 (393)
T ss_dssp SSSCCCCCHHHHHHTTCCC---CCTTSH--HHHHHHHHHHHHHHHHHTCC-CSEEEEESCCTTTHHHHHHHHHCCTTCEE
T ss_pred cCCCCCCCHHHHHHhcccc---cCcccH--HHHHHHHHHHHHHHHHhCCC-CCcEEEEeCCcHHHHHHHHHhcCCCCCEE
Confidence 3344566788888776532 112222 22345555555555556643 33469999999999999999999999999
Q ss_pred EEcCCCCCC--hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHh
Q 014172 183 IIPAPFWVS--YPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAK 259 (429)
Q Consensus 183 lv~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~ 259 (429)
+++.++|.+ +...++..|++++.++++.+ +.+|+++|++++++ ++++|++++|+||||.+++ +++|.++|++
T Consensus 102 l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~ 176 (393)
T 3kgw_A 102 LTGTNGIWGMRAAEIADRIGARVHQMIKKPG--EHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQP---LDGFGELCHR 176 (393)
T ss_dssp EEEESSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred EEEeCCchhHHHHHHHHHcCCceEEEeCCCC--CCCCHHHHHHHHhhCCCcEEEEeccCCcchhhcc---HHHHHHHHHH
Confidence 999988753 36778889999999998643 45899999999988 9999999999999999999 8899999999
Q ss_pred CCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhc---------
Q 014172 260 HPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ--------- 330 (429)
Q Consensus 260 ~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~--------- 330 (429)
| |+++|+||+|... .....+ . ..+.++++.|+||.++ .+.++||+++++++++.+......
T Consensus 177 ~-~~~li~De~~~~g----~~~~~~---~-~~~~d~~~~s~sK~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (393)
T 3kgw_A 177 Y-QCLLLVDSVASLG----GVPIYM---D-QQGIDIMYSSSQKVLN-APPGISLISFNDKAKYKVYSRKTKPVSFYTDIT 246 (393)
T ss_dssp T-TCEEEEECTTTTT----TSCCCT---T-TTTCCEEEEESSSTTC-CCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHH
T ss_pred c-CCEEEEECCcccc----Ccccch---h-hcCCCEEEecCccccc-CCCceeEEEECHHHHHHHhccCCCCCceeecHH
Confidence 9 9999999998742 111111 1 1355689999999874 344589999999999888653211
Q ss_pred --------------ccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCC----ceEEE
Q 014172 331 --------------FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ----GAFYL 392 (429)
Q Consensus 331 --------------~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~----~~~~~ 392 (429)
...+.+...+.++.++++.. .++++++++++++++++++.+.|+++ |+++..+. .++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 323 (393)
T 3kgw_A 247 YLAKLWGCEGETRVIHHTTPVTSLYCLRESLALI--AEQGLENCWRRHREATAHLHKHLQEM-GLKFFVKDPEIRLPTIT 323 (393)
T ss_dssp HHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHH--HHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSSSGGGBCSSEE
T ss_pred HHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcCCeEE
Confidence 12345677777777777641 12347889999999999999999998 88876443 35677
Q ss_pred EEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 393 FIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 393 ~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|+.++.. .+..+++++|++++||.+
T Consensus 324 ~~~~~~~-----------~~~~~~~~~l~~~~gi~v 348 (393)
T 3kgw_A 324 TVTVPAG-----------YNWRDIVSYVLDHFSIEI 348 (393)
T ss_dssp EEECCTT-----------BCHHHHHHHHHHHHCEEC
T ss_pred EEeCCCC-----------CCHHHHHHHHHHhCCEEE
Confidence 8888743 268899999998878876
No 127
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.97 E-value=2.2e-29 Score=250.06 Aligned_cols=299 Identities=13% Similarity=0.136 Sum_probs=220.5
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.++|++.|. ..++. ++.+.+++.+.+.+....+ .....+.++++++++.+.+| .++|++|+|+++++.
T Consensus 37 ~g~~~lD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~l~~~la~~~~----~~~v~~~~gg~~a~~ 110 (406)
T 4adb_A 37 QGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTG--NGYTNEPVLRLAKKLIDATF----ADRVFFCNSGAEANE 110 (406)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCC--TTSCCHHHHHHHHHHHHHSS----CSEEEEESSHHHHHH
T ss_pred CCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccccc--CCcCCHHHHHHHHHHHhhCC----CCeEEEeCcHHHHHH
Confidence 467799999883 33333 7899999999886532211 11123445566666666555 359999999999999
Q ss_pred HHHHHhcC-------CC-CEEEEcCCCCCChHHHHHHcCC-------------EEEEecCCCCCCCCCCHHHHHhhcccC
Q 014172 170 QAVLAVCS-------PG-DEVIIPAPFWVSYPEMARIADA-------------TPVILPTRISENFLLDPKVLESKLTEK 228 (429)
Q Consensus 170 ~~l~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~~~d~e~l~~~l~~~ 228 (429)
.++++++. +| |.|++++|+|+++...+...+. .+..+|. .|+++|+++++++
T Consensus 111 ~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~ 183 (406)
T 4adb_A 111 AALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-------NDINSASALIDDS 183 (406)
T ss_dssp HHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-------TCHHHHHTTCSTT
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-------CcHHHHHHHhcCC
Confidence 99998865 66 9999999999998766555544 3334432 3899999999988
Q ss_pred CcEEEEcCCCCCccCCC--CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccc
Q 014172 229 SRLLILCSPSNPTGSVY--PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (429)
Q Consensus 229 ~~~i~l~~p~NPtG~~~--~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 306 (429)
+++|+++ |+||||.++ +.+++++|.++|++| |+++|+||+|.++.+.+... .+.... ...+++ ||||.++
T Consensus 184 ~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~-~~~li~De~~~~~~~~g~~~-~~~~~~-~~~d~~---t~sK~~~- 255 (406)
T 4adb_A 184 TCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRH-NALLIFDEVQTGVGRTGELY-AYMHYG-VTPDLL---TTAKALG- 255 (406)
T ss_dssp EEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSSS-HHHHHT-CCCSEE---EECGGGG-
T ss_pred eEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCccchhH-HHHhcC-CCCCEE---Eechhhc-
Confidence 9999888 999999998 999999999999999 99999999999876655321 211121 122223 6899999
Q ss_pred ccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC----CCce
Q 014172 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL----EGVK 382 (429)
Q Consensus 307 ~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l----~g~~ 382 (429)
+|+|+||+++++++++.+.......+++.+.+.+.++.++|+.. ++ ++..+.++++++++.+.|+++ +.+.
T Consensus 256 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 330 (406)
T 4adb_A 256 GGFPVGALLATEECARVMTVGTHGTTYGGNPLASAVAGKVLELI---NT--PEMLNGVKQRHDWFVERLNTINHRYGLFS 330 (406)
T ss_dssp TTSCCEEEEECHHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHH---SS--HHHHHHHHHHHHHHHHHHHHHHHHHCCEE
T ss_pred CCCCeEEEEEcHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHH---Hh--cCHHHHHHHHHHHHHHHHHHHHHhCCCce
Confidence 99999999999999988876666667788999999999988751 11 567778888888888888765 1122
Q ss_pred eecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 383 MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 383 ~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.. +..++++|+.++... ..+..+++++|+++ ||.+
T Consensus 331 ~~-~~~g~~~~~~~~~~~---------~~~~~~~~~~l~~~-gi~v 365 (406)
T 4adb_A 331 EV-RGLGLLIGCVLNADY---------AGQAKQISQEAAKA-GVMV 365 (406)
T ss_dssp EE-EEETTEEEEEECTTT---------TTCHHHHHHHHHHT-TEEC
T ss_pred EE-EEEEEEEEEEEeCCc---------HHHHHHHHHHHHHC-CcEE
Confidence 12 234566888887521 02578999999887 8876
No 128
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.97 E-value=2e-29 Score=252.14 Aligned_cols=302 Identities=13% Similarity=0.119 Sum_probs=212.5
Q ss_pred cCCCeEEcCCCCC--CCCC--hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 93 AGVSVIRLAAGEP--DFDT--PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 93 ~g~~~i~L~~g~~--~~~~--p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
.|+.++|++.|.+ +++. |+++.+++.+++.... .|++..+..+++.++++.+.+.+|.++ +++|++|+|+++++
T Consensus 40 ~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~~~gg~ea~ 117 (419)
T 2eo5_A 40 DGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLA-HAAANDFYNIPQLELAKKLVTYSPGNF-QKKVFFSNSGTEAI 117 (419)
T ss_dssp TSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSC-CCSCSCSCCHHHHHHHHHHHHHSSCSS-CEEEEEESSHHHHH
T ss_pred CCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCc-cccccccCCHHHHHHHHHHHHhCCCCc-CCEEEEeCchHHHH
Confidence 4567899999884 4544 7999999999986532 344444555677788888888777543 78999999999999
Q ss_pred HHHHHHhcC-CCCEEEEcCCCCCChHHH-HHHcC-------------CEEEEecCCCCC--CCC------------CCHH
Q 014172 169 LQAVLAVCS-PGDEVIIPAPFWVSYPEM-ARIAD-------------ATPVILPTRISE--NFL------------LDPK 219 (429)
Q Consensus 169 ~~~l~~l~~-~gd~Vlv~~p~y~~~~~~-~~~~g-------------~~~~~v~~~~~~--~~~------------~d~e 219 (429)
..+++++.. +||+|++.+|+|+++... ....| .+++.+|.+... .|+ +|++
T Consensus 118 ~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~ 197 (419)
T 2eo5_A 118 EASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIE 197 (419)
T ss_dssp HHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHH
Confidence 999987654 489999999999865543 32222 256777764210 112 3688
Q ss_pred HHH-hhccc-----CCcEEEEcCCC-CCccC-CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCC
Q 014172 220 VLE-SKLTE-----KSRLLILCSPS-NPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 291 (429)
Q Consensus 220 ~l~-~~l~~-----~~~~i~l~~p~-NPtG~-~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~ 291 (429)
+|+ +++++ +++ +++++|+ ||||. +.+.+++++|.++|++| |+++|+||+|.++.+.+.. ..+... +..
T Consensus 198 ~l~~~~i~~~~~~~~~~-~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~-~~~li~DE~~~~~g~~g~~-~~~~~~-~~~ 273 (419)
T 2eo5_A 198 FIEDYIFVNLVPPEEVA-GIFFEPIQGEGGYVIPPKNFFAELQKLAKKY-GILLVDDEVQMGLGRTGKL-FAIENF-NTV 273 (419)
T ss_dssp HHHHTHHHHTCCGGGEE-EEEECSSBTTTTSBCCCTTHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSS-SGGGGG-TCC
T ss_pred HHHHHHHhhccCCCCEE-EEEEeCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCccCcch-hhHHhc-CCC
Confidence 999 88863 444 4555664 67896 67888999999999999 9999999999987655431 111111 112
Q ss_pred CceEEEeccChhccccc-ceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Q 014172 292 ERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDF 370 (429)
Q Consensus 292 ~~~i~~~S~SK~~~~~G-~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~ 370 (429)
.+ +.||||.++ .| +|+||++++++++ .+ ......+.+.+.++|.++.++|+. .+ ++++++++++++
T Consensus 274 ~d---~~t~sK~~~-~G~~riG~~~~~~~~~-~~-~~~~~~t~~~n~~~~~aa~aal~~---~~----~~~~~~~~~~~~ 340 (419)
T 2eo5_A 274 PD---VITLAKALG-GGIMPIGATIFRKDLD-FK-PGMHSNTFGGNALACAIGSKVIDI---VK----DLLPHVNEIGKI 340 (419)
T ss_dssp CS---EEEECGGGG-TTTSCCEEEEEEGGGC-CC-------CCCCCHHHHHHHHHHHHH---HH----HHHHHHHHHHHH
T ss_pred CC---EEEeccccc-CCccceEEEEEchHhh-cC-CcccCCCCCCCHHHHHHHHHHHHH---HH----HHHHHHHHHHHH
Confidence 22 338999999 59 9999999999887 66 323334567799999999999975 22 277889999999
Q ss_pred HHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 371 LVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 371 l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.+.|+++ +...++.|. |+|+++... . .... ++++|++ .||.+
T Consensus 341 l~~~L~~~--~~~~~~~g~-~~~i~~~~~-~---------~~~~-~~~~l~~-~Gv~v 383 (419)
T 2eo5_A 341 FAEELQGL--ADDVRGIGL-AWGLEYNEK-K---------VRDR-IIGESFK-RGLLL 383 (419)
T ss_dssp HHHHHTTS--SSEEEEETT-EEEEECSCH-H---------HHHH-HHHHHHH-TTEEC
T ss_pred HHHHHHHh--hhheEeeeE-EEEEEEecC-c---------cHHH-HHHHHHH-CCCEE
Confidence 99999886 444455554 577888321 0 1245 8888885 49976
No 129
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.97 E-value=5.7e-30 Score=253.68 Aligned_cols=296 Identities=15% Similarity=0.079 Sum_probs=216.5
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCC----CCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFT----RYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQ 170 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~----~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~ 170 (429)
.+.|.|+.+.+. ++|+.+.+++.+.+.+... .|....+..++.+.+.+++.+.+| .++++|++|+|+++++.+
T Consensus 19 ~~~iyld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~g~t~al~~ 95 (400)
T 3vax_A 19 SHMTYLDAAATT-RVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVS--AEPDELIFTSGATESNNI 95 (400)
T ss_dssp ---CCCCCCCCS-SSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTT--CCGGGEEEESCHHHHHHH
T ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcC--CCCCcEEEeCCHHHHHHH
Confidence 457888877766 5688999999888754211 121112223455566666666666 457899999999999999
Q ss_pred HHHHhc----CCCC-EEEEcCCCCCChHHHHHH---cCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCcc
Q 014172 171 AVLAVC----SPGD-EVIIPAPFWVSYPEMARI---ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTG 242 (429)
Q Consensus 171 ~l~~l~----~~gd-~Vlv~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG 242 (429)
++++++ ++|| +|+++.++|+++...+.. .|++++.++++. ++.+|+++|++++++++++|++++|+||||
T Consensus 96 ~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~nptG 173 (400)
T 3vax_A 96 ALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGP--SGRISVEGVMERLRPDTLLVSLMHVNNETG 173 (400)
T ss_dssp HHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCT--TCCCCHHHHHTTCCTTEEEEECCSBCTTTC
T ss_pred HHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCC--CCCcCHHHHHHhcCCCceEEEEECCCCCce
Confidence 999998 8999 999999999988766554 599999999864 466899999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEE-cCHH-H
Q 014172 243 SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA-GPKH-F 320 (429)
Q Consensus 243 ~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~-~~~~-~ 320 (429)
.+++ +++|.++|++| |++||+|++|.... ....+.. . .++++.|+||.+|++| +|+++ ++++ +
T Consensus 174 ~~~~---l~~i~~la~~~-~~~li~D~a~~~~~----~~~~~~~----~-~d~~~~s~~K~~g~~g--~g~~~~~~~~~~ 238 (400)
T 3vax_A 174 VIQP---VAELAQQLRAT-PTYLHVDAAQGYGK----VPGDLTT----P-IDMISISGHKIGAPKG--VGALVTRRREEM 238 (400)
T ss_dssp BBCC---HHHHHHHHTTS-SCEEEEECTTTTTT----SGGGGGS----C-CSEEEEETGGGTSCSS--CEEEEECBCSSS
T ss_pred eeCc---HHHHHHHHHhc-CCEEEEEhhhhcCC----CCcChhh----c-CcEEEEeHHHhCCCCc--eEEEEEecchhc
Confidence 9999 88999999999 99999999998522 1112211 1 4589999999877555 66666 6551 1
Q ss_pred H---HHHHHHh-------hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCc--
Q 014172 321 V---AACNKIQ-------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG-- 388 (429)
Q Consensus 321 ~---~~l~~~~-------~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~-- 388 (429)
. ..+.... .....+++...+.++.++++. ..+++++++++++++++++.+.|+ .+|+++..+.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~ 314 (400)
T 3vax_A 239 DDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKI---FEAEHAQWQVAAQDLRSRLLAGLA-STSFQVNGDQDHV 314 (400)
T ss_dssp TTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHH---HHHSHHHHHHHHHHHHHHHHHHHT-TTTCEECSCTTSB
T ss_pred cccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHhhC-CCCEEEeCCcccC
Confidence 1 1111111 112334566777767677764 355688999999999999999999 78999887665
Q ss_pred -eEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 389 -AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 389 -~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.++++.++.. +..++++.|. + ||.+
T Consensus 315 ~~~~~~~~~~~~------------~~~~l~~~L~-~-gi~v 341 (400)
T 3vax_A 315 VPHILNLSFEDV------------DAEAFLVTLK-D-LVAV 341 (400)
T ss_dssp CTTEEEEECTTC------------CHHHHHHHHH-H-HHHH
T ss_pred CCCEEEEEeCCC------------CHHHHHHHHh-c-CcEE
Confidence 34567777642 6888999887 4 7765
No 130
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.97 E-value=2.4e-29 Score=249.75 Aligned_cols=287 Identities=17% Similarity=0.215 Sum_probs=220.0
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 174 (429)
.++|+|+.|.++++ +.+.+++.+.+..+ .|++..+..++++++++++. .+++++++|+++++..++++
T Consensus 30 ~~~id~~~~~~~~~--~~v~~a~~~~~~~~--~y~~~~~~~~l~~~la~~~~--------~~~~v~~~~Gt~a~~~~l~~ 97 (399)
T 2oga_A 30 VPFLDLKAAYEELR--AETDAAIARVLDSG--RYLLGPELEGFEAEFAAYCE--------TDHAVGVNSGMDALQLALRG 97 (399)
T ss_dssp BCSCCHHHHHHHTH--HHHHHHHHHHHHHT--CCSSSHHHHHHHHHHHHHTT--------SSEEEEESCHHHHHHHHHHH
T ss_pred CcccccCcCCCCCC--HHHHHHHHHHHhcC--CCCCchhHHHHHHHHHHHHC--------CCeEEEecCHHHHHHHHHHH
Confidence 35789998887753 88999999888653 57666778899999999863 23678888889999999999
Q ss_pred h-cCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHH
Q 014172 175 V-CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEI 253 (429)
Q Consensus 175 l-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I 253 (429)
+ +++||+|+++.|+|.++...++..|++++.+++++ +++.+|++.+++++++++++|+ |+||||.+.+ +++|
T Consensus 98 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~---l~~i 170 (399)
T 2oga_A 98 LGIGPGDEVIVPSHTYIASWLAVSATGATPVPVEPHE-DHPTLDPLLVEKAITPRTRALL---PVHLYGHPAD---MDAL 170 (399)
T ss_dssp TTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCS-SSSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCC---HHHH
T ss_pred hCCCCcCEEEECCCccHHHHHHHHHCCCEEEEEecCC-CCCCcCHHHHHHhcCCCCeEEE---EeCCcCCccC---HHHH
Confidence 9 89999999999999999999999999999999864 3467999999999988888776 6789999998 8999
Q ss_pred HHHHHhCCCeEEEEccCCcccc-cCCCCCCccccCCCCCCceEEEecc--ChhcccccceeeEEEcC-HHHHHHHHHHhh
Q 014172 254 ARIVAKHPRLLVLSDEIYEHII-YAPATHTSFASLPGMWERTLTVNGF--SKAFAMTGWRLGYIAGP-KHFVAACNKIQS 329 (429)
Q Consensus 254 ~~~a~~~~~i~vi~Deay~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~--SK~~~~~G~R~G~v~~~-~~~~~~l~~~~~ 329 (429)
.++|+++ |+++|+||+|..+. +++. .+..+ ..+++.|| ||.++.+| |+||++++ +++++.+.....
T Consensus 171 ~~l~~~~-~~~li~Dea~~~g~~~~~~---~~~~~-----~di~~~S~~~sK~~~~~G-~~g~~~~~~~~~~~~l~~~~~ 240 (399)
T 2oga_A 171 RELADRH-GLHIVEDAAQAHGARYRGR---RIGAG-----SSVAAFSFYPGKNLGCFG-DGGAVVTGDPELAERLRMLRN 240 (399)
T ss_dssp HHHHHHH-TCEECEECTTCTTCEETTE---ETTCT-----TCEEEEECCTTSSSCCSS-CCEEEEESCHHHHHHHHHHHB
T ss_pred HHHHHHc-CCEEEEECcccccCccCCe---ecccc-----cCEEEEeCCCCccCCcCC-ceEEEEeCCHHHHHHHHHHHh
Confidence 9999999 99999999998753 3321 11111 24888998 79999778 99999986 888888876543
Q ss_pred cc------------cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceee-cCCceEEEEEec
Q 014172 330 QF------------TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-EPQGAFYLFIDF 396 (429)
Q Consensus 330 ~~------------~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~-~p~~~~~~~~~l 396 (429)
.. ....+.+.+.++.++++. ++...++.+++++++.+.|++++|+++. .|+++.++|+.+
T Consensus 241 ~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~-------~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~ 313 (399)
T 2oga_A 241 YGSRQKYSHETKGTNSRLDEMQAAVLRIRLAH-------LDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLF 313 (399)
T ss_dssp TTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHT-------HHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSE
T ss_pred cCccccccccccccCCCcCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcceeEEE
Confidence 21 123466666666666653 3345556667788899999988888764 355666666333
Q ss_pred CCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 397 STYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+-. . .+..++.+.|.++ ||.+
T Consensus 314 ~~~-~---------~~~~~l~~~L~~~-gI~v 334 (399)
T 2oga_A 314 TVR-T---------ERRDELRSHLDAR-GIDT 334 (399)
T ss_dssp EEE-C---------SSHHHHHHHHHHT-TBCC
T ss_pred EEE-C---------CCHHHHHHHHHHC-CCce
Confidence 211 0 2577899988765 8876
No 131
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.97 E-value=4.8e-30 Score=259.30 Aligned_cols=291 Identities=13% Similarity=0.130 Sum_probs=211.7
Q ss_pred CeEEcCCC-CCCCCChHHHHHHHHHH----HHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHH
Q 014172 96 SVIRLAAG-EPDFDTPVLIAEAGINA----IREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQ 170 (429)
Q Consensus 96 ~~i~L~~g-~~~~~~p~~v~~a~~~~----~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~ 170 (429)
++|+|+.| ++++++|+.+.++.... ...+.+.|+ ..|.+ +++++++++.+.+|. +++++++|+++++..
T Consensus 90 ~~i~l~~g~~~~~~~~~~i~~a~~~~~~~~~~~~~~~Y~-~~g~~-~~~~l~~~la~~~g~----~~~i~~~sGt~al~~ 163 (464)
T 1ibj_A 90 LLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYT-RSGNP-TRDALESLLAKLDKA----DRAFCFTSGMAALSA 163 (464)
T ss_dssp HHTCCCCSSCTTCCSSCCCCCCSBCCCSSSSCCCSCSBT-TTCCH-HHHHHHHHHHHHHTC----SEEEEESSHHHHHHH
T ss_pred eEEECCCCCCCCCCCCccHHhhhhhhhhcccccCCcccc-CCCCH-HHHHHHHHHHHHhCC----CeEEEECCHHHHHHH
Confidence 47899998 88888887777766532 223345676 45666 899999999888873 377888888899997
Q ss_pred HHHHhcCCCCEEEEcCCCCCChHHH----HHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCC
Q 014172 171 AVLAVCSPGDEVIIPAPFWVSYPEM----ARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYP 246 (429)
Q Consensus 171 ~l~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~ 246 (429)
++. ++++||+|++++|+|.++... ++..|++++.++.+ |++++++++++++++|++++|+||||.+++
T Consensus 164 ~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-------d~~~l~~~i~~~tk~v~l~~p~NptG~v~~ 235 (464)
T 1ibj_A 164 VTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-------KLDEVAAAIGPQTKLVWLESPTNPRQQISD 235 (464)
T ss_dssp HHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT-------SHHHHHHHCCSSEEEEEECSSCTTTCCCCC
T ss_pred HHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHHhccCceEEEEeCCCCCCCEeec
Confidence 775 789999999999999998764 56789999999862 899999999999999999999999999998
Q ss_pred HHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccc-ccceeeEEEcC-HHHHHHH
Q 014172 247 KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM-TGWRLGYIAGP-KHFVAAC 324 (429)
Q Consensus 247 ~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~-~G~R~G~v~~~-~~~~~~l 324 (429)
+++|+++|++| |+++|+||+|.... ...++ . .++++++.|+||.++. .|+|+||++++ +++++.+
T Consensus 236 ---l~~i~~la~~~-gi~livDea~~~g~----~~~~~-~----~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l 302 (464)
T 1ibj_A 236 ---IRKISEMAHAQ-GALVLVDNSIMSPV----LSRPL-E----LGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEV 302 (464)
T ss_dssp ---HHHHHHHHHTT-TCEEEEECTTTCTT----TCCGG-G----TTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHH
T ss_pred ---HHHHHHHHHHc-CCEEEEECCCcccc----cCChh-h----cCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHH
Confidence 99999999999 99999999997521 11111 1 3678999999999864 48999999998 4888888
Q ss_pred HHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH----------HHHHhccCCCceeecCCc---eEE
Q 014172 325 NKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDF----------LVKSFGELEGVKMSEPQG---AFY 391 (429)
Q Consensus 325 ~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~----------l~~~L~~l~g~~~~~p~~---~~~ 391 (429)
.........+.+.+.|.++..+++. ....++...+......++ +.+.|+++|++++..++. |.+
T Consensus 303 ~~~~~~~g~~~~~~~~~a~~~al~~---~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~ 379 (464)
T 1ibj_A 303 YFLQNSEGSGLAPFDCWLCLRGIKT---MALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSV 379 (464)
T ss_dssp HHHHHHTTCBCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSE
T ss_pred HHHHHhcCCCCCHHHHHHHHhchhh---HHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceE
Confidence 8776555566788888888888764 222232222222222222 234455566777666542 335
Q ss_pred EEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 392 LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 392 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+++++++. ....+|+++|.. .||.+
T Consensus 380 ~~~~l~~~-----------~~~~~~~~~L~~-~gi~v 404 (464)
T 1ibj_A 380 FSFITGSV-----------ALSKHLVETTKY-FSIAV 404 (464)
T ss_dssp EEEECSCH-----------HHHHHHHHHCSS-SEECS
T ss_pred EEEEECCH-----------HHHHHHHHhcCc-ceEee
Confidence 77777421 013456666543 46655
No 132
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.97 E-value=3.5e-28 Score=242.85 Aligned_cols=292 Identities=17% Similarity=0.248 Sum_probs=214.2
Q ss_pred CCCCCCCCC-hHHHHHHHHHHHHcCCCC-CCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh-cC
Q 014172 101 AAGEPDFDT-PVLIAEAGINAIREGFTR-YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CS 177 (429)
Q Consensus 101 ~~g~~~~~~-p~~v~~a~~~~~~~~~~~-Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l-~~ 177 (429)
+.|.|++++ |+++.+++.+.+.++... |++..|..++++++++.+.+.+|.+ ++++++|+++++..++.++ ++
T Consensus 5 ~~g~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~----~~i~~~~gt~al~~~~~~~~~~ 80 (418)
T 2c81_A 5 FDHWPEWPQHSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGVP----YCVPTTSGSTALMLALEALGIG 80 (418)
T ss_dssp ---CCCSSCCCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHTTCC
T ss_pred cCCCCCCCCCCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHcCCC
Confidence 456777766 799999999998765444 8777887777777777777777742 5677777889999999999 89
Q ss_pred CCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHH
Q 014172 178 PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIV 257 (429)
Q Consensus 178 ~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a 257 (429)
+||+|+++.|+|.++...++..|++++.+++++ +++.+|++.|++++++++++|+++ ||||...+ +++|.++|
T Consensus 81 ~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~~~---~~~i~~~~ 153 (418)
T 2c81_A 81 EGDEVIVPSLTWIATATAVLNVNALPVFVDVEA-DTYCIDPQLIKSAITDKTKAIIPV---HLFGSMAN---MDEINEIA 153 (418)
T ss_dssp TTCEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHGGGCCTTEEEECCB---CCTTCCCC---HHHHHHHH
T ss_pred CcCEEEECCCccHhHHHHHHHcCCEEEEEecCC-CCCCcCHHHHHHhhCCCCeEEEEe---CCcCCccc---HHHHHHHH
Confidence 999999999999999999999999999999864 357799999999999889988854 58999877 99999999
Q ss_pred HhCCCeEEEEccCCcccc-cCCCCCCccccCCCCCCceEEEecc--ChhcccccceeeEEEcC-HHHHHHHHHHhhccc-
Q 014172 258 AKHPRLLVLSDEIYEHII-YAPATHTSFASLPGMWERTLTVNGF--SKAFAMTGWRLGYIAGP-KHFVAACNKIQSQFT- 332 (429)
Q Consensus 258 ~~~~~i~vi~Deay~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~--SK~~~~~G~R~G~v~~~-~~~~~~l~~~~~~~~- 332 (429)
++| |++||+|++|..+. +++.. +..+. .+.+.|| ||.++. | |+||++++ +++++.+........
T Consensus 154 ~~~-~~~li~D~a~~~~~~~~~~~---~~~~~-----~~~~~s~s~~K~~~~-g-~~g~~~~~~~~l~~~~~~~~~~~~~ 222 (418)
T 2c81_A 154 QEH-NLFVIEDCAQSHGSVWNNQR---AGTIG-----DIGAFSCQQGKVLTA-G-EGGIIVTKNPRLFELIQQLRADSRV 222 (418)
T ss_dssp HHT-TCEEEEECTTCTTCEETTEE---TTSSS-----SEEEEECCTTSSSCS-S-SCEEEEESCHHHHHHHHHHHBTTEE
T ss_pred HHC-CCEEEEECcccccCccCCEe---ccccc-----ceEEEeccCCcccCC-C-CeEEEEECCHHHHHHHHHHHHhCcc
Confidence 999 99999999999875 54321 11121 2777888 999995 8 99999995 788888776543211
Q ss_pred -----------CC-------C------chHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceee-cCC
Q 014172 333 -----------SG-------A------SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-EPQ 387 (429)
Q Consensus 333 -----------~~-------~------~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~-~p~ 387 (429)
+. . ....+.+ ..... .+++++..++.+++++++.+.|++++|+++. .++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa-~~~~~-----l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 296 (418)
T 2c81_A 223 YCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSA-ILLDQ-----LQELDDKNAIREKNAMFLNDALSKIDGIKVMKRPP 296 (418)
T ss_dssp ECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHH-HHHHH-----HTTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCT
T ss_pred ccccccccccchhhccccccccCcCCCcCHHHHH-HHHHH-----HHHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCC
Confidence 00 0 0111211 11111 2335667777778889999999998898887 466
Q ss_pred c-eEE---EE-EecCCccCCcccCCCCCCChHHHHHHHHHhCCee
Q 014172 388 G-AFY---LF-IDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVL 427 (429)
Q Consensus 388 ~-~~~---~~-~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~ 427 (429)
+ +.+ ++ +.++.... ...+..+++++|.+++||.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~L~~~~gI~ 334 (418)
T 2c81_A 297 QVSRQTYYGYVFRFDPVKF-------GGLNADQFCEILREKLNMG 334 (418)
T ss_dssp TEEECCCSEEEEEECGGGT-------TTCCHHHHHHHHHHHHTCC
T ss_pred CCcccccEEEEEEEccccc-------cccCHHHHHHHHHHcCCCC
Confidence 5 332 33 66653000 0026789999998876887
No 133
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.97 E-value=2.6e-29 Score=248.85 Aligned_cols=299 Identities=13% Similarity=0.124 Sum_probs=214.8
Q ss_pred cCCCeEEcCCCC--CCCC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.+++++.|. ++++ +|+.+.+++.+.+.... .++. ....++++.+++.+.+.+| .++++|++|+|+++++.
T Consensus 43 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~-~~~~-~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~~a~~ 118 (395)
T 1vef_A 43 EGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLM-AMPQ-TLPTPMRGEFYRTLTAILP--PELNRVFPVNSGTEANE 118 (395)
T ss_dssp TSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCC-CCCT-TSCCHHHHHHHHHHHHTSC--TTEEEEEEESSHHHHHH
T ss_pred CCCEEEEccCccccccCCCCCHHHHHHHHHHHHhCC-CCcc-ccCCHHHHHHHHHHHHhcC--CCcCEEEEcCcHHHHHH
Confidence 356789999886 4555 68899999999887532 1211 1123455666666665555 36789999999999999
Q ss_pred HHHHHhc--CCCCEEEEcCCCCCC-hHHHHHHcCCE------------EEEecCCCCCCCCCCHHHHHhhcccCCcEEEE
Q 014172 170 QAVLAVC--SPGDEVIIPAPFWVS-YPEMARIADAT------------PVILPTRISENFLLDPKVLESKLTEKSRLLIL 234 (429)
Q Consensus 170 ~~l~~l~--~~gd~Vlv~~p~y~~-~~~~~~~~g~~------------~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l 234 (429)
.+++++. .+||.|++.+|+|++ +...+...|.+ +..++. .|+++|++++++++++|++
T Consensus 119 ~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~i~~~~~~v~~ 191 (395)
T 1vef_A 119 AALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-------NDVEALKRAVDEETAAVIL 191 (395)
T ss_dssp HHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-------TCHHHHHHHCCTTEEEEEE
T ss_pred HHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCC-------CcHHHHHHHhccCEEEEEE
Confidence 9998764 578999999999875 45566777775 223321 4899999999888888887
Q ss_pred cCCCCCccCCC-CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeE
Q 014172 235 CSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY 313 (429)
Q Consensus 235 ~~p~NPtG~~~-~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~ 313 (429)
+.++||||.++ +.+++++|.++|++| |+++|+||+|.++.+.+... .+.... .... + .||||.++ .|+|+||
T Consensus 192 ~~~~~~tG~~~~~~~~l~~i~~l~~~~-~~~li~Dea~~~~~~~g~~~-~~~~~~-~~~d-~--~s~sK~~~-~g~~~G~ 264 (395)
T 1vef_A 192 EPVQGEGGVRPATPEFLRAAREITQEK-GALLILDEIQTGMGRTGKRF-AFEHFG-IVPD-I--LTLAKALG-GGVPLGV 264 (395)
T ss_dssp CSEETTTTSEECCHHHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSSS-THHHHT-CCCS-E--EEECGGGG-TTSSCEE
T ss_pred eCccCCCCccCCCHHHHHHHHHHHHHc-CCEEEEEecccCCccCCchh-HhhhcC-CCCC-E--EEEccccc-CCCceEE
Confidence 77789999875 688899999999999 99999999999754433211 111111 1112 2 28899999 4999999
Q ss_pred EEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCC--ceeecCCceEE
Q 014172 314 IAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG--VKMSEPQGAFY 391 (429)
Q Consensus 314 v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g--~~~~~p~~~~~ 391 (429)
+++++++++.+.......+.+++.+.+.++.++++. ..+ .+..++++++++++.+.|+++.. +... +..|+|
T Consensus 265 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~---~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~g~~ 338 (395)
T 1vef_A 265 AVMREEVARSMPKGGHGTTFGGNPLAMAAGVAAIRY---LER--TRLWERAAELGPWFMEKLRAIPSPKIREV-RGMGLM 338 (395)
T ss_dssp EEEEHHHHHTSCTTSSCCSSTTCHHHHHHHHHHHHH---HHH--HTTHHHHHHHHHHHHHHHHTSCCTTEEEE-EEETTE
T ss_pred EEehHHHHhhhccCCcCCCcCCCHHHHHHHHHHHHH---HHh--CCHHHHHHHHHHHHHHHHHHhhcCceEEE-EEEEEE
Confidence 999998877665432334556788888888888875 222 45678888999999999988732 2222 334567
Q ss_pred EEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 392 LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 392 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+|++++. +..+++++|++++||.+
T Consensus 339 ~~~~~~~-------------~~~~l~~~l~~~~gi~v 362 (395)
T 1vef_A 339 VGLELKE-------------KAAPYIARLEKEHRVLA 362 (395)
T ss_dssp EEEEESS-------------CSHHHHHHHHHHHCEEC
T ss_pred EEEEEcC-------------hHHHHHHHHHHHCCeEE
Confidence 8888863 36789999983459876
No 134
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.97 E-value=1.3e-29 Score=247.69 Aligned_cols=295 Identities=14% Similarity=0.072 Sum_probs=211.6
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 174 (429)
...+.+..|++++++++.+.+++.+.+. ...|++..+..+|++++++++. .+..++++|+++++..++++
T Consensus 13 ~~~~~~~~~~~~~g~~p~v~~ai~~~~~--~~~~~~~~~~~~l~~~la~~~~--------~~~~i~~~~g~~a~~~a~~~ 82 (359)
T 3pj0_A 13 TPYKLGGNGPRNVGVLTEALQNIDDNLE--SDIYGNGAVIEDFETKIAKILG--------KQSAVFFPSGTMAQQIALRI 82 (359)
T ss_dssp CSEESSSSSCCBHHHHHHHTTTSCTTCB--CCBTTBSHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHH
T ss_pred cchhhcCCCccccCCCHHHHHHHHhhcc--cCcccCCHHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHH
Confidence 3567888888888888999998887432 3567777778899999998863 12335567888999999999
Q ss_pred hcCCCCE--EEEcCCCCCChH---HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCc-cCCCCHH
Q 014172 175 VCSPGDE--VIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPT-GSVYPKN 248 (429)
Q Consensus 175 l~~~gd~--Vlv~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPt-G~~~~~~ 248 (429)
++.+||. |+++.++|.... ......|++++.++. +++.+|+++|+++ .+++++|++++||||+ |.+++.+
T Consensus 83 ~~~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~~~~d~~~l~~~-~~~~~~v~~~~p~n~~~G~~~~~~ 158 (359)
T 3pj0_A 83 WADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGT---ANQLLTIDDIKSL-REPVSSVLIELPQREIGGQLPAFE 158 (359)
T ss_dssp HHHHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSC---TTSCCCHHHHHTC-SSCCSEEEEESSBGGGTSBCCCHH
T ss_pred HHhcCCCcEEEEeccceeeehhcchHHHhcCceEEecCC---cCCCcCHHHHHhc-cCCceEEEEEecccCCCcccCCHH
Confidence 9988886 555555543221 233567999999986 3467999999998 7789999999999998 7999999
Q ss_pred HHHHHHHHHHhCCCeEEEEccCCccccc--CCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHH
Q 014172 249 LLDEIARIVAKHPRLLVLSDEIYEHIIY--APATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK 326 (429)
Q Consensus 249 ~l~~I~~~a~~~~~i~vi~Deay~~~~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~ 326 (429)
++++|+++|++| |++||+|++|..+.. .+. +...+.. ...+++.||||.++.++. ||+++++++++.+..
T Consensus 159 ~l~~l~~~~~~~-~~~li~D~a~~~~~~~~~~~---~~~~~~~--~~d~~~~s~sK~~~~~~g--g~~~~~~~l~~~~~~ 230 (359)
T 3pj0_A 159 ELEKISEYCHEQ-GISLHLDGARLWEITPFYQK---SAEEICA--LFDSVYVSFYKGIGGIAG--AILAGNDDFVQEAKI 230 (359)
T ss_dssp HHHHHHHHHHHH-TCEEEEEETTCGGGHHHHTC---CHHHHHT--TCSEEEEESSSTTCCSSC--EEEEECHHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCEEEEECcchhcchhhhCC---CHHHhhc--cCCEEEEeccccCCCcce--EEEECCHHHHHHHHH
Confidence 999999999999 999999999875431 121 1112211 223566799999875532 888999999999887
Q ss_pred HhhcccCCC--chHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceee-cCCceEEEEEecCCccCCc
Q 014172 327 IQSQFTSGA--SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-EPQGAFYLFIDFSTYYGSE 403 (429)
Q Consensus 327 ~~~~~~~~~--~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~-~p~~~~~~~~~l~~~~~~~ 403 (429)
.......+. ....+.++..+++. .+ +..++++++++++.+.|++++|+++. .|.+++|+|++++....
T Consensus 231 ~~~~~~~~~~~~~~~~~a~~~~l~~------~~-~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-- 301 (359)
T 3pj0_A 231 WKRRYGGDLISLYPYILSADYYFEK------RI-GKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSAD-- 301 (359)
T ss_dssp HHHHTTCCCSCCHHHHHHHHHHHHH------HG-GGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCHH--
T ss_pred HHHHhCCCcchhHHHHHHHHHHHHH------HH-HHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCccc--
Confidence 654443332 23333333444432 22 33445788899999999999899885 56777778888864200
Q ss_pred ccCCCCCCChHHHHHHHHHhCCeec
Q 014172 404 AEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 404 ~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+..++.+.|.++ ||.+
T Consensus 302 -------~~~~~l~~~l~~~-GV~v 318 (359)
T 3pj0_A 302 -------EIGAILTKIQDET-GVGI 318 (359)
T ss_dssp -------HHHHHHHHHHHHH-CEEC
T ss_pred -------hhHHHHHHHHHhc-CcEe
Confidence 1356777777655 9976
No 135
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.96 E-value=2.3e-28 Score=242.10 Aligned_cols=302 Identities=13% Similarity=0.084 Sum_probs=218.6
Q ss_pred cCCCeEEcCCC--CCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAG--EPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g--~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.++|++.| .+.++. ++++.+++.+.+.+..+.| ..+..++++++++++.+.+| +++|++|+|+++++.
T Consensus 34 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~l~~~la~~~~----~~~v~~~~gg~ea~~ 107 (395)
T 3nx3_A 34 KAKKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLLHTS--NLYYNENIAAAAKNLAKASA----LERVFFTNSGTESIE 107 (395)
T ss_dssp TCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCSCCC--TTSBCHHHHHHHHHHHHHHT----CSEEEEESSHHHHHH
T ss_pred CCCEEEECCCcHHhccCCCCCHHHHHHHHHHHHhccccc--cccCCHHHHHHHHHHHHhcC----CCeEEEeCCHHHHHH
Confidence 46779999988 445554 7999999999886543333 23446777777777777765 579999999999999
Q ss_pred HHHHHhc-------CCCCEEEEcCCCCCChHHHHHHcC-------------CEEEEecCCCCCCCCCCHHHHHhhcccCC
Q 014172 170 QAVLAVC-------SPGDEVIIPAPFWVSYPEMARIAD-------------ATPVILPTRISENFLLDPKVLESKLTEKS 229 (429)
Q Consensus 170 ~~l~~l~-------~~gd~Vlv~~p~y~~~~~~~~~~g-------------~~~~~v~~~~~~~~~~d~e~l~~~l~~~~ 229 (429)
.+++.+. .++|.|++.+|+|+++...+...+ .++..++. .|+++|++++++++
T Consensus 108 ~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~ 180 (395)
T 3nx3_A 108 GAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-------NDISSVEKLVNEKT 180 (395)
T ss_dssp HHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-------TCHHHHHTTCCTTE
T ss_pred HHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-------CCHHHHHHhccCCe
Confidence 9998875 457999999999988765444332 34555553 28999999999888
Q ss_pred cEEEEcCCCCCccCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccccc
Q 014172 230 RLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG 308 (429)
Q Consensus 230 ~~i~l~~p~NPtG~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 308 (429)
++|+++.++|++|.+ .+++++++|.++|++| |+++|+||+|.++.+.+.. ...... +....+.||||.++ .|
T Consensus 181 ~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~-~~~li~Dev~~~~g~~g~~-~~~~~~----~~~~d~~t~sK~~~-~G 253 (395)
T 3nx3_A 181 CAIILESVQGEGGINPANKDFYKALRKLCDEK-DILLIADEIQCGMGRSGKF-FAYEHA----QILPDIMTSAKALG-CG 253 (395)
T ss_dssp EEEEEESEECTTSCEECCHHHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSS-SGGGGG----TCCCSEEEECGGGT-TT
T ss_pred EEEEEeCccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEEecccCCCcCCcc-hhHHhc----CCCCCEEEeccccc-CC
Confidence 898888888877776 6788899999999999 9999999999987544421 111111 22223557999999 59
Q ss_pred ceeeEEEcCHHH-HHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCC
Q 014172 309 WRLGYIAGPKHF-VAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 387 (429)
Q Consensus 309 ~R~G~v~~~~~~-~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~ 387 (429)
+|+||+++++++ ++.+.......+++.+.+++.++.++|+... .++++++.++..+..++.+.+.+.+++.+...++.
T Consensus 254 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 332 (395)
T 3nx3_A 254 LSVGAFVINQKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFK-EEKILENVNKLTPYLEQSLDELINEFDFCKKRKGL 332 (395)
T ss_dssp SCCEEEEECHHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE
T ss_pred CceEEEEEchhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeE
Confidence 999999999998 7777655445566789999999999887411 12344455555555555555555556555555555
Q ss_pred ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 388 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+ .|+|+.++.. .+..+++++|+++ ||.+
T Consensus 333 g-~~~~~~~~~~-----------~~~~~~~~~l~~~-Gi~v 360 (395)
T 3nx3_A 333 G-FMQGLSLDKS-----------VKVAKVIQKCQEN-ALLL 360 (395)
T ss_dssp T-TEEEEEECTT-----------SCHHHHHHHHHHT-TEEC
T ss_pred E-EEEEEEeCCc-----------chHHHHHHHHHHC-CCEE
Confidence 5 4578888642 2578899998876 8875
No 136
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.96 E-value=2.8e-28 Score=244.38 Aligned_cols=309 Identities=12% Similarity=0.081 Sum_probs=212.8
Q ss_pred cCCCeEEcCCCCC--CCC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGEP--DFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~~--~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..+|++.|.+ +++ .|+++.+++.+.+.+... +....+..+.+.++++.+.+.++ .++++|++|+|+++++.
T Consensus 41 ~g~~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~ggtea~~ 117 (429)
T 1s0a_A 41 DGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSH-VMFGGITHAPAIELCRKLVAMTP--QPLECVFLADSGSVAVE 117 (429)
T ss_dssp TSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSC-CCCSSEECHHHHHHHHHHHHHSC--TTCCEEEEESSHHHHHH
T ss_pred CCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccc-ccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCHHHHHH
Confidence 4567899998884 455 479999999998875422 21111123445555566666565 46789999999999999
Q ss_pred HHHHHhc---C----CCCEEEEcCCCCCChHHHHH-HcC-------------CEEEEecCCC---CCCC-CCCHHHHHhh
Q 014172 170 QAVLAVC---S----PGDEVIIPAPFWVSYPEMAR-IAD-------------ATPVILPTRI---SENF-LLDPKVLESK 224 (429)
Q Consensus 170 ~~l~~l~---~----~gd~Vlv~~p~y~~~~~~~~-~~g-------------~~~~~v~~~~---~~~~-~~d~e~l~~~ 224 (429)
.+++++. + |||+|++.+|+|+++...+. ..| ..++.++.+. ++.+ .+|+++|+++
T Consensus 118 ~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 197 (429)
T 1s0a_A 118 VAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARL 197 (429)
T ss_dssp HHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHH
T ss_pred HHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHH
Confidence 9988654 2 68999999999998655332 212 1234444431 1123 4799999998
Q ss_pred cc---cCCcEEEEcCC-CCCccC-CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEec
Q 014172 225 LT---EKSRLLILCSP-SNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNG 299 (429)
Q Consensus 225 l~---~~~~~i~l~~p-~NPtG~-~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S 299 (429)
++ +++++|+++.. +||||. +.+.+++++|.++|++| |+++|+||+|.++.+.+.. ..+.... .... +.|
T Consensus 198 l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~-~~~li~De~~~~~g~~g~~-~~~~~~~-~~~d---~~t 271 (429)
T 1s0a_A 198 MAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDRE-GILLIADEIATGFGRTGKL-FACEHAE-IAPD---ILC 271 (429)
T ss_dssp HHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSS-SGGGGGT-CCCS---EEE
T ss_pred HHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEeehhhCCcccchH-HHhhhcC-CCCC---EEE
Confidence 87 34555544444 699996 55788899999999999 9999999999976544321 1121111 1122 347
Q ss_pred cChhccccc-ceeeEEEcCHHHHHHHHHHh-----hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHH
Q 014172 300 FSKAFAMTG-WRLGYIAGPKHFVAACNKIQ-----SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVK 373 (429)
Q Consensus 300 ~SK~~~~~G-~R~G~v~~~~~~~~~l~~~~-----~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~ 373 (429)
|||.++ +| +|+||+++++++++.+.... ...+.+.+.+++.++.++|+. .++ ++..++++++++++.+
T Consensus 272 ~sK~l~-~G~~~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~---~~~--~~~~~~~~~~~~~l~~ 345 (429)
T 1s0a_A 272 LGKALT-GGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAI---LES--GDWQQQVADIEVQLRE 345 (429)
T ss_dssp ECGGGG-TSSSCCEEEEECHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHH---HHT--CHHHHHHHHHHHHHHH
T ss_pred eccccc-CCCccceEEEeCHHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHH---HHh--CCHHHHHHHHHHHHHH
Confidence 999998 68 99999999999988876531 223556789999999888874 111 2456777788889999
Q ss_pred HhccC---CCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 374 SFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 374 ~L~~l---~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
.|+++ +++...++.|. |+|++++.. .+..+++++|+++ ||.+.
T Consensus 346 ~L~~l~~~~~~~~~~~~g~-~~~~~~~~~-----------~~~~~l~~~l~~~-Gi~v~ 391 (429)
T 1s0a_A 346 QLAPARDAEMVADVRVLGA-IGVVETTHP-----------VNMAALQKFFVEQ-GVWIR 391 (429)
T ss_dssp HHGGGGGCTTEEEEEEETT-EEEEEESSC-----------BCHHHHHHHHHHT-TEECC
T ss_pred HHHHHhcCCCEEEEEEeeE-EEEEEECCc-----------ccHHHHHHHHHHC-CCEEe
Confidence 88875 56655556554 688888742 2577899998865 99863
No 137
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.96 E-value=1.2e-28 Score=242.25 Aligned_cols=293 Identities=12% Similarity=0.049 Sum_probs=213.8
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhc
Q 014172 97 VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC 176 (429)
Q Consensus 97 ~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~ 176 (429)
..+|+.|. .++|+++.+++.+.+. ..|+ .+..++.+++++++.+.+|.+.+.+.+++|+|+++++..++++++
T Consensus 20 ~~~~~pgp--~~~~~~v~~a~~~~~~---~~~~--~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~ 92 (376)
T 3f0h_A 20 MLNFTVGP--VMSSEEVRAIGAEQVP---YFRT--TEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCF 92 (376)
T ss_dssp CEECSSSS--CCCCHHHHHHHTSCCC---CCSS--HHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHC
T ss_pred ceeecCCC--CCCcHHHHHHhcCCCC---CCCC--HHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhcc
Confidence 45555543 4567888888765431 1232 234577788888888888864333455669999999999999999
Q ss_pred CCCCEEEEcCCCCCChH--HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHH
Q 014172 177 SPGDEVIIPAPFWVSYP--EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 254 (429)
Q Consensus 177 ~~gd~Vlv~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~ 254 (429)
++||+|+++.|.|.++. ..+...|++++.++.+ .++.+|+++++++++++++++++++|+||||.+++ +++|.
T Consensus 93 ~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~ 167 (376)
T 3f0h_A 93 TKKDKVLVIDGGSFGHRFVQLCEIHEIPYVALKLE--HGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYD---TMMIG 167 (376)
T ss_dssp CTTCCEEEEESSHHHHHHHHHHHHTTCCEEEEECC--TTCCCCHHHHHTTTTSCCCEEEEESEETTTTEECC---HHHHH
T ss_pred CCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCC--CCCCCCHHHHHHhhccCceEEEEecccCCcceecC---HHHHH
Confidence 99999999998766644 3577789999999986 34679999999999889999999999999999999 99999
Q ss_pred HHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcc-cccceeeEEEcCHHHHHHHHHHhh----
Q 014172 255 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYIAGPKHFVAACNKIQS---- 329 (429)
Q Consensus 255 ~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~R~G~v~~~~~~~~~l~~~~~---- 329 (429)
++|++| |+++|+|++|..+.. ...+.. .+.++++.|+||.++ ++| +|++++++++++.+.....
T Consensus 168 ~l~~~~-~~~li~D~~~~~~~~----~~~~~~----~~~d~~~~s~~K~l~~~~G--~g~~~~~~~~~~~~~~~~~~~~~ 236 (376)
T 3f0h_A 168 EFCKKN-NMFFVCDCVSAFLAD----PFNMNE----CGADVMITGSQKVLACPPG--ISVIVLAPRGVERVEKSKVRTMY 236 (376)
T ss_dssp HHHHHT-TCEEEEECTTTTTTS----CCCHHH----HTCSEEEEETTTTTCCCSS--CEEEEECHHHHHHHHTCCCCCST
T ss_pred HHHHHc-CCEEEEEcCccccCc----cccccc----cCccEEEecCcccccCCCc--eEEEEECHHHHHHhhcCCCCcee
Confidence 999999 999999999986422 111111 234589999999998 555 7889999999888764211
Q ss_pred -------------cccCCCchHHHHHHHHHHhcCCCChH--HHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEE-
Q 014172 330 -------------QFTSGASSISQKAGVAALGLGYAGGE--VVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLF- 393 (429)
Q Consensus 330 -------------~~~~~~~~~~q~aa~~~l~~~~~~~~--~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~- 393 (429)
....+++...+.++.++++. ..+ .++++++.++++++++.+.|+++ |+++..+....+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~ 312 (376)
T 3f0h_A 237 FDLKDALKNQERGQTPFTPAVGILLQINERLKE---IKKHGGADAEVARIASQAADFRAKIKDL-PFELVSESPANGVTS 312 (376)
T ss_dssp TCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHH---HHHTTHHHHHHHHHHHHHHHHHHHTTTS-SEEECCSSBBTTEEE
T ss_pred ecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHH---HHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCccCccccCceEEE
Confidence 11223444444555555543 122 47888999999999999999988 77766544332222
Q ss_pred EecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 394 IDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 394 ~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+..+. .+..+++++|++++||.+
T Consensus 313 ~~~~~------------~~~~~l~~~l~~~~gi~v 335 (376)
T 3f0h_A 313 VHPTT------------ANAYDIFLKLKDEYGIWI 335 (376)
T ss_dssp EEESS------------SCHHHHHHHHHHHSSEEC
T ss_pred EeCCC------------CCHHHHHHHHHHhCCEEE
Confidence 22222 268899999998889876
No 138
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2e-28 Score=250.10 Aligned_cols=294 Identities=13% Similarity=0.060 Sum_probs=223.9
Q ss_pred CChHHHHHHHHHHHHc----CCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcC-----C
Q 014172 108 DTPVLIAEAGINAIRE----GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS-----P 178 (429)
Q Consensus 108 ~~p~~v~~a~~~~~~~----~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~-----~ 178 (429)
..++.+.+++.+++.. +...|...+|..++++.+++++.+.+|.+.+++++++|+|+++++.++++++++ +
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~ 154 (497)
T 3mc6_A 75 HGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHR 154 (497)
T ss_dssp CCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHS
T ss_pred CCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcC
Confidence 3457788888887765 344566667788999999999999999765678999999999999999999865 5
Q ss_pred C---CEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHH
Q 014172 179 G---DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIAR 255 (429)
Q Consensus 179 g---d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~ 255 (429)
| |+|+++.|+|.++...++..|++++.+|++. +++.+|+++|++++++++++|++++|+||||.+.+ +++|.+
T Consensus 155 g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---l~~i~~ 230 (497)
T 3mc6_A 155 GITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDP-TTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADD---IEGLGK 230 (497)
T ss_dssp CCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCT-TTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCS---CTTTTT
T ss_pred CCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCc-ccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCC---HHHHHH
Confidence 6 8999999999999999999999999999864 35779999999999999999999999999999999 889999
Q ss_pred HHHhCCCeEEEEccCCcccccC-----CCCCC-ccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhh
Q 014172 256 IVAKHPRLLVLSDEIYEHIIYA-----PATHT-SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS 329 (429)
Q Consensus 256 ~a~~~~~i~vi~Deay~~~~~~-----~~~~~-~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~ 329 (429)
+|++| |+++|+|++|+.+... +.... .+. .. ..+.++++.|++|.++ +|.++||++++++.+........
T Consensus 231 la~~~-g~~livD~a~~~~~~~f~~~~~~~~~~~~~-~~-~~g~d~~~~s~~K~l~-~~~~~g~~~~~~~~~~~~~~~~~ 306 (497)
T 3mc6_A 231 IAQKY-KLPLHVDSCLGSFIVSFMEKAGYKNLPLLD-FR-VPGVTSISCDTHKYGF-APKGSSVIMYRNSDLRMHQYYVN 306 (497)
T ss_dssp HHHHT-TCCEEEETTTTHHHHGGGTTTTCCSCCCCS-TT-STTCCEEEEETTTTTC-CCSSCEEEECSSHHHHTTTSCCB
T ss_pred HHHHh-CCEEEEECcchhhhhhhhhhhcccCCcccc-cc-CCCCcEEEECchhhcC-CCCCceeEEecCHHHHhhhhccc
Confidence 99999 9999999999865421 11111 111 11 2355688999999875 78889999988765543321111
Q ss_pred -cccC----C------Cc---hHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc-CCCceee-cCCceEEEE
Q 014172 330 -QFTS----G------AS---SISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMS-EPQGAFYLF 393 (429)
Q Consensus 330 -~~~~----~------~~---~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-l~g~~~~-~p~~~~~~~ 393 (429)
.+.. . .+ ..++.++...+. .++++++.++..++++++.+.|++ ++|+++. +|.+++ ++
T Consensus 307 ~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~-----~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~-v~ 380 (497)
T 3mc6_A 307 PAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMG-----ENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSV-IS 380 (497)
T ss_dssp TTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSE-EE
T ss_pred ccccCCCcCCcCcccCCcchhHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeE-EE
Confidence 1000 0 01 333555555554 456788888999999999999999 7999887 455555 44
Q ss_pred EecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 394 IDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 394 ~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+..+. .+..++++.|.++ ||.+
T Consensus 381 ~~~~~------------~~~~~l~~~L~~~-Gi~v 402 (497)
T 3mc6_A 381 FSSKT------------LNIHELSDRLSKK-GWHF 402 (497)
T ss_dssp EECTT------------TTHHHHHHHHHTT-TCBC
T ss_pred EeCCC------------CCHHHHHHHHHhC-CEEE
Confidence 45543 2688999998876 8865
No 139
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.96 E-value=1.2e-28 Score=246.65 Aligned_cols=300 Identities=13% Similarity=0.137 Sum_probs=217.8
Q ss_pred cCCCeEEcCCCC--CCCC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.+||++.|. .+++ .++.+.+++.+.+.+.. .++ ..+..++++++++++.+.+| .++|++|+|+++++.
T Consensus 55 ~g~~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~~-~~~-~~~~~~~~~~l~~~la~~~g----~~~v~~~~ggteA~~ 128 (420)
T 2pb2_A 55 QGKEYIDFAGGIAVTALGHCHPALVEALKSQGETLW-HTS-NVFTNEPALRLGRKLIDATF----AERVLFMNSGTEANE 128 (420)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCC-CCC-TTSCCHHHHHHHHHHHHHSS----CSEEEEESSHHHHHH
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHHhcc-ccc-CccCCHHHHHHHHHHHhhCC----CCeEEEeCCHHHHHH
Confidence 467799998884 3343 47899999999886532 222 22345677778888877765 479999999999999
Q ss_pred HHHHHhcC-------CC-CEEEEcCCCCCChHH-HHHHcCCE------------EEEecCCCCCCCCCCHHHHHhhcccC
Q 014172 170 QAVLAVCS-------PG-DEVIIPAPFWVSYPE-MARIADAT------------PVILPTRISENFLLDPKVLESKLTEK 228 (429)
Q Consensus 170 ~~l~~l~~-------~g-d~Vlv~~p~y~~~~~-~~~~~g~~------------~~~v~~~~~~~~~~d~e~l~~~l~~~ 228 (429)
.++++++. +| ++|++.+|+|.++.. .+...|.+ ++.++. .|+++|+++++++
T Consensus 129 ~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~~i~~~ 201 (420)
T 2pb2_A 129 TAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-------NDLHAVKAVMDDH 201 (420)
T ss_dssp HHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-------TCHHHHHHHCCTT
T ss_pred HHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-------CCHHHHHHHhccC
Confidence 99998875 77 599999999987654 44555653 455553 2899999999988
Q ss_pred CcEEEEcCCCCCccC-CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccc
Q 014172 229 SRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 307 (429)
Q Consensus 229 ~~~i~l~~p~NPtG~-~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 307 (429)
+++|++++++|++|. +++.+++++|.++|++| |+++|+||+|.++.+.|.. ..+..+. ....++ ||||.++ +
T Consensus 202 ~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~-gi~lI~Dev~~g~~~~g~~-~~~~~~~-~~~dii---t~sK~l~-~ 274 (420)
T 2pb2_A 202 TCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEH-QALLVFDEVQCGMGRTGDL-FAYMHYG-VTPDIL---TSAKALG-G 274 (420)
T ss_dssp EEEEEECSEETTTTSEECCHHHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSS-SHHHHHT-CCCSEE---EECGGGG-T
T ss_pred ceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHc-CCEEEEEcCCcCcccCCcH-HHHHhcC-CCCCeE---Eeccccc-C
Confidence 999999888898884 68999999999999999 9999999999877655432 1111111 112222 7899999 9
Q ss_pred cceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC----CCcee
Q 014172 308 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL----EGVKM 383 (429)
Q Consensus 308 G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l----~g~~~ 383 (429)
|+|+||+++++++++.+.......+++.+.+++.++.++|+.. ++ +++.+.++++++++.+.|+++ +.+..
T Consensus 275 G~~iG~~~~~~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~---~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 349 (420)
T 2pb2_A 275 GFPVSAMLTTQEIASAFHVGSHGSTYGGNPLACAVAGAAFDII---NT--PEVLQGIHTKRQQFVQHLQAIDEQFDIFSD 349 (420)
T ss_dssp TSCCEEEEECHHHHTTCC----CCEECCCHHHHHHHHHHHHHH---SS--HHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred CCceEEEEEhHHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHH---Hh--ccHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 9999999999988776654333445678899999999888751 22 356777888888888888764 44444
Q ss_pred ecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 384 SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 384 ~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.++.| .|++++++.... .+..+++++|+++ ||.+
T Consensus 350 ~~~~g-~~~~v~~~~~~~---------~~~~~l~~~l~~~-Gi~v 383 (420)
T 2pb2_A 350 IRGMG-LLIGAELKPKYK---------GRARDFLYAGAEA-GVMV 383 (420)
T ss_dssp EEEET-TEEEEEECGGGT---------TCHHHHHHHHHHT-TEEC
T ss_pred EEecc-eEEEEEECCCch---------HHHHHHHHHHHHC-CCEE
Confidence 45555 457788864200 1478899999875 8876
No 140
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.96 E-value=1.8e-28 Score=239.15 Aligned_cols=293 Identities=11% Similarity=0.059 Sum_probs=220.1
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCC-CCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh
Q 014172 97 VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTP-NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 175 (429)
Q Consensus 97 ~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~-~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l 175 (429)
.+.+.-| +.++|+++++++.+.+.++...|+. ..+..++.+.+.+++.+.+|.. ++++|++|+|+++++.++++++
T Consensus 5 ~~~~~p~--p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~al~~~~~~l 81 (362)
T 3ffr_A 5 KIYFTPG--PSELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELP-SNYEVLFLASATEIWERIIQNC 81 (362)
T ss_dssp CEEECSS--SCCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCC-TTEEEEEESCHHHHHHHHHHHH
T ss_pred ceeccCC--CcCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCCchHHHHHHHHhc
Confidence 4555555 3445788888888887765423322 2234467777888888888753 5678999999999999999999
Q ss_pred cCCCCEEEEcCCCCCC-hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHH
Q 014172 176 CSPGDEVIIPAPFWVS-YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 254 (429)
Q Consensus 176 ~~~gd~Vlv~~p~y~~-~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~ 254 (429)
+++ +.+++..+.|.. +...++..|++++.++.+ .++.+|+++++ +++++++|++++|+||||.+++ +++|.
T Consensus 82 ~~~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~---l~~i~ 153 (362)
T 3ffr_A 82 VEK-KSFHCVNGSFSKRFYEFAGELGREAYKEEAA--FGKGFYPADIT--VPADAEIICLTHNETSSGVSMP---VEDIN 153 (362)
T ss_dssp CSS-EEEEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCGGGCC--CCTTCCEEEEESEETTTTEECC---HHHHT
T ss_pred cCC-cEEEEcCcHHHHHHHHHHHHhCCCeEEEecC--CCCCCCHHHHh--ccCCccEEEEEcCCCCcceeCC---HHHHH
Confidence 988 556666666652 345677889999999985 34678999998 7889999999999999999999 88899
Q ss_pred HHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcc-cccceeeEEEcCHHHHHHHHHHhh----
Q 014172 255 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYIAGPKHFVAACNKIQS---- 329 (429)
Q Consensus 255 ~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~R~G~v~~~~~~~~~l~~~~~---- 329 (429)
++|++|||+++|+|++|..+.. ...+ .+.++++.|+||.++ ++| +|++++++++++.+.....
T Consensus 154 ~la~~~p~~~li~D~a~~~~~~----~~~~------~~~d~~~~s~~K~~~~~~G--~g~~~~~~~~~~~~~~~~~gg~~ 221 (362)
T 3ffr_A 154 TFRDKNKDALIFVDAVSSLPYP----KFDW------TKIDSVFFSVQKCFGLPAG--LGVWILNDRVIEKSKALLAKRKS 221 (362)
T ss_dssp TSGGGSTTSEEEEECTTTTTSS----CCCT------TSCSEEEEETTSTTCCCSC--CEEEEEEHHHHHHHHHHHHTTCC
T ss_pred HHHHhCCCCEEEEecccccCCc----ccCh------hHCcEEEEecccccCCCCc--eEEEEECHHHHHHhhhccccCCC
Confidence 9999986799999999986321 1111 114588999999998 677 6888899998888776543
Q ss_pred -----------------cccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC----Cc
Q 014172 330 -----------------QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP----QG 388 (429)
Q Consensus 330 -----------------~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p----~~ 388 (429)
....+++...+.++..+++.- ..+.+++++++++++++++.+.|+++||+++..+ .+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~ 299 (362)
T 3ffr_A 222 IGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDM--LQISADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRS 299 (362)
T ss_dssp CCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHH--HHHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBC
T ss_pred CcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHH--HHccHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcC
Confidence 113456777777776776530 0223678899999999999999999989988753 24
Q ss_pred eEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 389 AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 389 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++++|+.+++ +..+++++|.++ ||.+
T Consensus 300 ~~~~~~~~~~-------------~~~~~~~~l~~~-gi~~ 325 (362)
T 3ffr_A 300 MTTIVANTTM-------------LPGEINKILEPF-DMAV 325 (362)
T ss_dssp SSEEEEEESS-------------CHHHHHHHHGGG-TEEE
T ss_pred CceEEEecCC-------------CHHHHHHHHHHC-CeEE
Confidence 5668888863 578999999887 9875
No 141
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.96 E-value=1.5e-28 Score=252.08 Aligned_cols=288 Identities=14% Similarity=0.101 Sum_probs=217.6
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcE--EEecChHHHHHHHHHHhcCCC--------CEE
Q 014172 113 IAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQI--LVSNGAKQSILQAVLAVCSPG--------DEV 182 (429)
Q Consensus 113 v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i--~~t~G~~~al~~~l~~l~~~g--------d~V 182 (429)
+.+++...+......|...++..++++++++++.+.+|.+.+++++ ++|+|+++++..++++++++| |+|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~V 195 (514)
T 3mad_A 116 LNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEA 195 (514)
T ss_dssp HHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEE
T ss_pred HHHHHHHHhhcCCcccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeE
Confidence 3344433333334455555667789999999999999976555778 999999999999999998776 999
Q ss_pred EEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCC
Q 014172 183 IIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR 262 (429)
Q Consensus 183 lv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~ 262 (429)
+++.|+|.++...++..|++++.+|++. ++.+|+++|++++++++++|++++|+||||.+.+ +++|.++|++| |
T Consensus 196 i~~~~~~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~-~ 269 (514)
T 3mad_A 196 VVPVSAHAAFDKAAQYFGIKLVRTPLDA--DYRADVAAMREAITPNTVVVAGSAPGYPHGVVDP---IPEIAALAAEH-G 269 (514)
T ss_dssp EEETTSCTHHHHHHHHHTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCC---HHHHHHHHHHH-T
T ss_pred EEeCccchHHHHHHHHcCCeeEEeeeCC--CCCCCHHHHHHHhccCCEEEEEeCCCCCCccccC---HHHHHHHHHHh-C
Confidence 9999999999999999999999999864 5679999999999999999999999999999999 89999999999 9
Q ss_pred eEEEEccCCcccccC-----CCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhh--------
Q 014172 263 LLVLSDEIYEHIIYA-----PATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS-------- 329 (429)
Q Consensus 263 i~vi~Deay~~~~~~-----~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~-------- 329 (429)
+++|+|++|+.+.+. |.....+.. ...+.++++.|++|.++ +|.++||++++++..........
T Consensus 270 i~livDea~~~~~~~~~~~~g~~~~~~~~--~~~g~d~~~~s~~K~l~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (514)
T 3mad_A 270 IGCHVDACLGGFILPWAERLGYPVPPFDF--RLEGVTSVSADTHKYGY-GAKGTSVILYRRPDLLHYQYFIAADWPGGLY 346 (514)
T ss_dssp CEEEEECTTTTTTHHHHHHTTCCCCCCST--TSTTCCEEEECTTTTTC-CCSSCEEEEESSHHHHTTTCEEESSCTTCSE
T ss_pred CeEEEecccccccchhHHhcCCCCCcccc--cCCCCcEEEECchhccC-CCCCeEEEEEeCHHHhccccccccccCCCcc
Confidence 999999999987541 111112211 12356789999999975 77899999887765443221100
Q ss_pred ---cccCCCchH---HHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCc
Q 014172 330 ---QFTSGASSI---SQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSE 403 (429)
Q Consensus 330 ---~~~~~~~~~---~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~ 403 (429)
....+.+.. ++.++...+. .++++++.++..++++++.+.|++++|+++..+..+ ++|+..+..
T Consensus 347 ~~~~~~gs~~~~~~~a~~aal~~l~-----~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~-~~~~~~~~~---- 416 (514)
T 3mad_A 347 FSPTFAGSRPGALSATAWAAMLSLG-----EEGYLDATRRILQAADRLKAGVRAIPSLKILGDPLW-VIAVASDEL---- 416 (514)
T ss_dssp EESSSCSSCCHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCCSS-EEEEECSSS----
T ss_pred cCCccCCCCchHHHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCCeE-EEEEeCCCC----
Confidence 001122222 3333333332 466788899999999999999999989998766665 567766532
Q ss_pred ccCCCCCCChHHHHHHHHHhCCeec
Q 014172 404 AEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 404 ~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+..++.++|+++ ||.+
T Consensus 417 --------~~~~l~~~L~~~-Gi~v 432 (514)
T 3mad_A 417 --------NIYQVMEEMAGR-GWRL 432 (514)
T ss_dssp --------CHHHHHHHHHTT-TCBC
T ss_pred --------CHHHHHHHHHhc-CCEe
Confidence 688999998877 8865
No 142
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.96 E-value=6.5e-28 Score=244.06 Aligned_cols=323 Identities=13% Similarity=0.038 Sum_probs=226.7
Q ss_pred cCCCeEEcCCC--CCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAG--EPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g--~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.+||+..| ...++. |+.+.+++.+++.+..+.|+...+..++++++++++.+..+ .+.++|++|+|+++++.
T Consensus 49 ~G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~gGseA~~ 126 (460)
T 3gju_A 49 NGRKSIDAFAGLYCVNVGYGRQKIADAIATQAKNLAYYHAYVGHGTEASITLAKMIIDRAP--KGMSRVYFGLSGSDANE 126 (460)
T ss_dssp TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHHSCCCCCTTCCCHHHHHHHHHHHHHSC--TTEEEEEEESSHHHHHH
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHhhCC--CCcCEEEEeCchHHHHH
Confidence 57789999988 344544 69999999998876545565556677889999999988765 35679999999999999
Q ss_pred HHHHHhcC--------CCCEEEEcCCCCCChHHHHHHcCC-------------EEEEecCCC--C-CCCCCC--------
Q 014172 170 QAVLAVCS--------PGDEVIIPAPFWVSYPEMARIADA-------------TPVILPTRI--S-ENFLLD-------- 217 (429)
Q Consensus 170 ~~l~~l~~--------~gd~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~--~-~~~~~d-------- 217 (429)
.++++++. +++.|++.+|+|+++...+...+. .+..++... . +++..+
T Consensus 127 ~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~ 206 (460)
T 3gju_A 127 TNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHC 206 (460)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHH
Confidence 99998874 469999999999988766554422 234444321 1 112233
Q ss_pred HHHHHhhcc----cCCcEEEEcCCCCCccC-CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCC
Q 014172 218 PKVLESKLT----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 292 (429)
Q Consensus 218 ~e~l~~~l~----~~~~~i~l~~p~NPtG~-~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~ 292 (429)
+++|+++++ +++++|+++.++|++|. +++++.+++|.++|++| |+++|+||+|.+|.+.|.. .......
T Consensus 207 ~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~-~~llI~DEv~~g~gr~g~~-~~~~~~~---- 280 (460)
T 3gju_A 207 ADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKY-DVLLVADEVVTGFGRLGTM-FGSDHYG---- 280 (460)
T ss_dssp HHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSS-CHHHHHT----
T ss_pred HHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCccccc-chHhhcC----
Confidence 588888886 45666667666778886 77888899999999999 9999999999987554421 1111111
Q ss_pred ceEEEeccChhccccc-ceeeEEEcCHHHHHHHHHH-------hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 014172 293 RTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 364 (429)
Q Consensus 293 ~~i~~~S~SK~~~~~G-~R~G~v~~~~~~~~~l~~~-------~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~ 364 (429)
....+.+|||.++ .| +|+||+++++++++.+... ....+++.+.+++.++.++|+... .++.+++.++..
T Consensus 281 ~~pdi~t~sK~l~-gG~~~lg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~-~~~~~~~~~~~~ 358 (460)
T 3gju_A 281 IKPDLITIAKGLT-SAYAPLSGVIVADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELID-EMDLVTNAGETG 358 (460)
T ss_dssp CCCSEEEECGGGT-TTSSCCEEEEEEHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHH-HTTHHHHHHHHH
T ss_pred CCCCeeeeehhhc-CCCCCeEEEEECHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHH-hccHHHHHHHHH
Confidence 1112457999997 56 8999999999999988632 334566789999999999997411 134566777777
Q ss_pred HHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCC-CCCChHHHHHHHHHhCCeec
Q 014172 365 RERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFG-KIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 365 ~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~Ll~~~gV~v 428 (429)
+..++.+.+.+++++.+..+++.|.| +++.+...... ...+. ......++++.|+++ ||.+
T Consensus 359 ~~~~~~l~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~-Gv~v 420 (460)
T 3gju_A 359 AYFRAELAKAVGGHKNVGEVRGDGML-AAVEFVADKDD-RVFFDASQKIGPQVATALAAS-GVIG 420 (460)
T ss_dssp HHHHHHHHHHHTTSTTEEEEEEETTE-EEEEECSBTTT-TBCCCGGGCHHHHHHHHHHHT-TEEC
T ss_pred HHHHHHHHHHHhcCCCeEEEeeeeEE-EEEEEccCccc-cccccchHHHHHHHHHHHHHC-CeEE
Confidence 77788888888887767777777765 66666432000 00000 001256788888877 8875
No 143
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.96 E-value=1.9e-28 Score=244.13 Aligned_cols=298 Identities=12% Similarity=0.053 Sum_probs=207.5
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCC-CCC------CCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGF-TRY------TPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~-~~Y------~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
+.|+|..+++.. |+.+.+++.+.+.+.. ..| +......++++.+.+++.+.+|. ++++|++++| ++++
T Consensus 26 ~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~--~~~~i~~~sG-t~a~ 100 (417)
T 3n0l_A 26 EGLEMIASENFT--LPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNC--KFANVQPNSG-SQAN 100 (417)
T ss_dssp HSEECCTTCCCC--CHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC--SEEECCCSSH-HHHH
T ss_pred cCeeeecccCCC--CHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhCC--CCcceEeccH-HHHH
Confidence 479998887664 7889999888774322 122 22223356666666677777774 5567888888 7999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCCChHH---HHHH--cCCEEEEecCCCCCCCCCCHHHHHhhcc-cCCcEEEEcCCCCCcc
Q 014172 169 LQAVLAVCSPGDEVIIPAPFWVSYPE---MARI--ADATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTG 242 (429)
Q Consensus 169 ~~~l~~l~~~gd~Vlv~~p~y~~~~~---~~~~--~g~~~~~v~~~~~~~~~~d~e~l~~~l~-~~~~~i~l~~p~NPtG 242 (429)
..++.+++++||+|+++.|+|.++.. .+.. .+..++.++++ +++.+|+++|+++++ +++++|++++|+| |
T Consensus 101 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~~--G 176 (417)
T 3n0l_A 101 QGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVE--LDGRIDYEKVREIAKKEKPKLIVCGASAY--A 176 (417)
T ss_dssp HHHHHHHSCTTCEEEEECC----------------CCSEEEEECCC--TTSSCCHHHHHHHHHHHCCSEEEECCSSC--C
T ss_pred HHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCC--CCCCcCHHHHHHHHHhcCCeEEEECCccc--C
Confidence 99999999999999999999987654 3333 34456666665 557799999999998 6899999888886 8
Q ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEccCCc-ccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcC-HHH
Q 014172 243 SVYPKNLLDEIARIVAKHPRLLVLSDEIYE-HIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHF 320 (429)
Q Consensus 243 ~~~~~~~l~~I~~~a~~~~~i~vi~Deay~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~-~~~ 320 (429)
.+++ +++|.++|++| |+++|+||+|. ++.+.+..+..+ ...++++.||||.+ +|+|+||++++ +++
T Consensus 177 ~~~~---l~~i~~l~~~~-~~~li~Dea~~~g~~~~~~~~~~~------~~~di~~~s~sK~l--~g~~~G~~~~~~~~~ 244 (417)
T 3n0l_A 177 RVID---FAKFREIADEI-GAYLFADIAHIAGLVVAGEHPSPF------PYAHVVSSTTHKTL--RGPRGGIIMTNDEEL 244 (417)
T ss_dssp SCCC---HHHHHHHHHHH-TCEEEEECTTTHHHHHTTSSCCCT------TTCSEEEEESSTTT--CSCSCEEEEESCHHH
T ss_pred ccCC---HHHHHHHHHHc-CCEEEEECccchhhhhcccCCCcc------ccceEEEeeCcccc--CCCCeeEEEECCHHH
Confidence 8888 89999999999 99999999964 444444322221 13458999999988 78999999998 788
Q ss_pred HHHHHHHhhcccCC-CchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeec-CCceEEEEEecCC
Q 014172 321 VAACNKIQSQFTSG-ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-PQGAFYLFIDFST 398 (429)
Q Consensus 321 ~~~l~~~~~~~~~~-~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~-p~~~~~~~~~l~~ 398 (429)
++.+.........+ ++...+.++..++... ..+++++++++++++++++.+.|.+. |+++.. +..++++|++++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~ 321 (417)
T 3n0l_A 245 AKKINSAIFPGIQGGPLMHVIAAKAVGFKFN--LSDEWKVYAKQVRTNAQVLANVLMDR-KFKLVSDGTDNHLVLMSFLD 321 (417)
T ss_dssp HHHHHHHHTTTTCSSCCHHHHHHHHHHHHHH--TSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECTT
T ss_pred HHHHhhhhCCcccCCcHHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCceEEEEEccc
Confidence 88887765444333 3444444444445431 13567888899999999999999985 887764 3445678888864
Q ss_pred ccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 399 YYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
. + .+..++.+.| +++||.+
T Consensus 322 ~-~---------~~~~~~~~~l-~~~gi~v 340 (417)
T 3n0l_A 322 R-E---------FSGKDADLAL-GNAGITA 340 (417)
T ss_dssp S-S---------SCHHHHHHHH-HHTTEEC
T ss_pred C-C---------CCHHHHHHHH-HHcCeEE
Confidence 2 1 2455666555 5669976
No 144
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.96 E-value=8.9e-29 Score=247.95 Aligned_cols=260 Identities=15% Similarity=0.118 Sum_probs=185.8
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCC----------HHHHHHHHHHHHhhcCCCCCCCcEEEecChH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGT----------LELRSAICHKLKEENGLSYTPDQILVSNGAK 165 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~----------~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~ 165 (429)
+.+.|+.+.+. ++|+.+.+++.+.+.. ...|.. .+. .++|+++++++ | +++++|++|+|++
T Consensus 18 ~~~~Ld~~~~~-~~~~~v~~a~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~~v~~~~g~t 88 (432)
T 3a9z_A 18 RKVYMDYNATT-PLEPEVIQAVTEAMKE-AWGNPS-SSYVAGRKAKDIINTARASLAKMI----G--GKPQDIIFTSGGT 88 (432)
T ss_dssp CCEECBTTTCC-CCCHHHHHHHHHHHHH-CCSCTT-CSSHHHHHHHHHHHHHHHHHHHHH----T--CCGGGEEEESCHH
T ss_pred CcEEeeCCccC-CCCHHHHHHHHHHHHH-hcCCCc-cCcHHHHHHHHHHHHHHHHHHHHc----C--CCcCeEEEeCChH
Confidence 57999998877 6688999999998865 233422 222 46777777765 4 4678999999999
Q ss_pred HHHHHHHHHhc--------CCCCEEEEcCCCCCCh-----------------HHHHHHcCCEEEEecCCCCCCCCCCHHH
Q 014172 166 QSILQAVLAVC--------SPGDEVIIPAPFWVSY-----------------PEMARIADATPVILPTRISENFLLDPKV 220 (429)
Q Consensus 166 ~al~~~l~~l~--------~~gd~Vlv~~p~y~~~-----------------~~~~~~~g~~~~~v~~~~~~~~~~d~e~ 220 (429)
+++.+++.+++ ++||+|+++.|+|..| ...++..|++++.+|++.+ ++.+|++.
T Consensus 89 ~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~ 167 (432)
T 3a9z_A 89 ESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKV-NGQVEVED 167 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTT-TSSCCHHH
T ss_pred HHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcc-cCCcCHHH
Confidence 99999999986 5899999999999876 3444567999999998642 35689999
Q ss_pred HHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCC----------eEEEEccCCcccccCCCCCCccccCCCC
Q 014172 221 LESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR----------LLVLSDEIYEHIIYAPATHTSFASLPGM 290 (429)
Q Consensus 221 l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~----------i~vi~Deay~~~~~~~~~~~~~~~~~~~ 290 (429)
|++++++++++|++++|+||||.+++ +++|.++|+++ + ++||+||+|+.+ .....+..+
T Consensus 168 l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~-~~~~~~~~~~~~~livDea~~~~----~~~~~~~~~--- 236 (432)
T 3a9z_A 168 ILAAVRPTTCLVTIMLANNETGVIMP---ISEISRRIKAL-NQIRAASGLPRVLVHTDAAQALG----KRRVDVEDL--- 236 (432)
T ss_dssp HHHTCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHHHH-HHHHHHHTCCCCEEEEECTTTTT----TSCCCHHHH---
T ss_pred HHHhccCCceEEEEECcccCcccccC---HHHHHHHHHhc-CcccccccCCceEEEEEchhhhC----CcccChhhc---
Confidence 99999989999999999999999999 77899999999 8 999999999763 222222222
Q ss_pred CCceEEEeccChhcccccceeeEEEcCHHH-HHHHHHH-------hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHH
Q 014172 291 WERTLTVNGFSKAFAMTGWRLGYIAGPKHF-VAACNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 362 (429)
Q Consensus 291 ~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~-~~~l~~~-------~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~ 362 (429)
+..+++.|+||.+| +|+||+++++++ ...+... ......+.+.+.+.++.++++. ..++++++++
T Consensus 237 -~~d~~~~s~~K~~g---~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~---~~~~~~~~~~ 309 (432)
T 3a9z_A 237 -GVDFLTIVGHKFYG---PRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADL---VSENCETYEA 309 (432)
T ss_dssp -CCSEEEEEGGGTTC---CSCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHH---HHHHHHHHHH
T ss_pred -CCCEEEEehhHhcC---CcceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHH---HHhhHHHHHH
Confidence 23367899999874 679999998765 2222211 1112234677777777777775 3567888999
Q ss_pred HHHHHHHHHHHHhccCCCcee
Q 014172 363 AFRERRDFLVKSFGELEGVKM 383 (429)
Q Consensus 363 ~~~~~r~~l~~~L~~l~g~~~ 383 (429)
+++++++++.+.|++++|+++
T Consensus 310 ~~~~~~~~l~~~L~~~~g~~~ 330 (432)
T 3a9z_A 310 HMRDIRDYLEERLEAEFGKRI 330 (432)
T ss_dssp HHHHHHHHHHHHHHHHHGGGE
T ss_pred HHHHHHHHHHHHHHhccCCcE
Confidence 999999999999988656543
No 145
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.96 E-value=9.8e-28 Score=237.15 Aligned_cols=285 Identities=17% Similarity=0.219 Sum_probs=212.8
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 175 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l 175 (429)
++|+|+. |++ |+++.+++.+.+.+. .|.+..+..++++++++++. .+++++|+|+++++..+++++
T Consensus 9 ~~i~~~~--p~~--~~~~~~a~~~~~~~~--~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~al~~~~~~~ 74 (393)
T 1mdo_A 9 DFLPFSR--PAM--GAEELAAVKTVLDSG--WITTGPKNQELEAAFCRLTG--------NQYAVAVSSATAGMHIALMAL 74 (393)
T ss_dssp CCBCSCC--CCC--CHHHHHHHHHHHHHT--CCSSSHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHHHHHHT
T ss_pred cccccCC--CCC--CHHHHHHHHHHHhcC--CcCCChHHHHHHHHHHHHhC--------CCcEEEecChHHHHHHHHHHc
Confidence 3677776 554 467788998888764 34456678899999999973 248999999999999999999
Q ss_pred -cCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHH
Q 014172 176 -CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 254 (429)
Q Consensus 176 -~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~ 254 (429)
+++||+|+++.|+|.++...++..|++++.+++++ +++.+|++.+++.+++++++|+++ ||||.+.+ +++|.
T Consensus 75 ~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~---~~~G~~~~---~~~i~ 147 (393)
T 1mdo_A 75 GIGEGDEVITPSMTWVSTLNMIVLLGANPVMVDVDR-DTLMVTPEHIEAAITPQTKAIIPV---HYAGAPAD---LDAIY 147 (393)
T ss_dssp TCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEECCB---CGGGCCCC---HHHHH
T ss_pred CCCCCCEEEeCCCccHhHHHHHHHCCCEEEEEeccC-CcCCCCHHHHHHhcCCCceEEEEe---CCCCCcCC---HHHHH
Confidence 89999999999999999999999999999999874 346799999999998888888865 48999988 89999
Q ss_pred HHHHhCCCeEEEEccCCccc-ccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcC-HHHHHHHHHHhhccc
Q 014172 255 RIVAKHPRLLVLSDEIYEHI-IYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQFT 332 (429)
Q Consensus 255 ~~a~~~~~i~vi~Deay~~~-~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~-~~~~~~l~~~~~~~~ 332 (429)
++|++| |+++|+|++|..+ .+.+. . +. . .++++.||||..+++|.|+||++++ +++++.+........
T Consensus 148 ~l~~~~-~~~li~D~a~~~g~~~~~~---~---~~--~-~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~l~~~~~~~~ 217 (393)
T 1mdo_A 148 ALGERY-GIPVIEDAAHATGTSYKGR---H---IG--A-RGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGL 217 (393)
T ss_dssp HHHHHH-TCCBCEECTTCTTCEETTE---E---TT--S-SSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTE
T ss_pred HHHHHc-CCeEEEECccccCCeECCe---e---cC--C-CCeEEEeCCCCCccccccceEEEeCCHHHHHHHHHHHhcCC
Confidence 999999 9999999999963 34321 1 11 1 5699999994444456799999996 788888876533211
Q ss_pred ------------------------CCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeec-C-
Q 014172 333 ------------------------SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-P- 386 (429)
Q Consensus 333 ------------------------~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~-p- 386 (429)
...+.+...++...++ .+++..++.+++++++.+.|++++ +++.. +
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~-------~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~ 289 (393)
T 1mdo_A 218 GVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQ-------KLDALNARRAAIAAQYHQAMADLP-FQPLSLPS 289 (393)
T ss_dssp ECC-----------CCEESSCCCBCCCCHHHHHHHHHHHH-------THHHHHHHHHHHHHHHHHHHHTSS-CEECCCCS
T ss_pred cccchhhhcccccccccccccCccCCCCHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHhcCC-cccccCCC
Confidence 1123343333333333 245566666778888999998884 76642 2
Q ss_pred ----CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 387 ----QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 387 ----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+++++|+.++... .+ .+..++.+.|.++ ||.+
T Consensus 290 ~~~~~~~~~~~v~~~~~~----~~----~~~~~l~~~l~~~-gi~v 326 (393)
T 1mdo_A 290 WEHIHAWHLFIIRVDEAR----CG----ITRDALMASLKTK-GIGT 326 (393)
T ss_dssp SCEECCCSCEEEECCHHH----HS----SCHHHHHHHHHHT-TBCC
T ss_pred CCCCceeEEEEEEecccc----cc----cCHHHHHHHHHhC-CCCc
Confidence 45567889887300 00 2678899998775 8875
No 146
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.96 E-value=1.5e-28 Score=241.99 Aligned_cols=293 Identities=12% Similarity=0.086 Sum_probs=213.1
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCC--CCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNA--GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~--G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~ 173 (429)
+.+.|..| +.++++++.+++.+... ..|.+.. ...+++++++++++...| +++++|++|+|+++++..+++
T Consensus 5 ~~~~~~p~--p~~~~~~v~~a~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~v~~~~g~t~al~~~~~ 77 (385)
T 2bkw_A 5 VDTLLIPG--PIILSGAVQKALDVPSL---GHTSPEFVSIFQRVLKNTRAVFKSAAA--SKSQPFVLAGSGTLGWDIFAS 77 (385)
T ss_dssp CCEECSSS--SCCCCHHHHHTTSCCCC---CTTSHHHHHHHHHHHHHHHHHTTCCGG--GTCEEEEEESCTTHHHHHHHH
T ss_pred cceeecCC--CcCchHHHHHHHhcccc---ccCCHHHHHHHHHHHHHHHHHhCCCCC--CCCceEEEcCchHHHHHHHHH
Confidence 34566665 34456778777665422 1232321 345677788887765433 356899999999999999999
Q ss_pred Hhc---CCCCEEEEc-CCCCCChH-HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-CCcEEEEcCCCCCccCCCCH
Q 014172 174 AVC---SPGDEVIIP-APFWVSYP-EMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPK 247 (429)
Q Consensus 174 ~l~---~~gd~Vlv~-~p~y~~~~-~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~p~NPtG~~~~~ 247 (429)
+++ ++||+|+++ .|+|..+. ..++..|++++.+++. +.++.+|++.|++++++ ++++|++++|+||||.+++
T Consensus 78 ~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~- 155 (385)
T 2bkw_A 78 NFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPL-KIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSD- 155 (385)
T ss_dssp HHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCS-STTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC-
T ss_pred HHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecC-CCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcC-
Confidence 998 899999887 55666653 6778899999999982 13466899999999987 8999999999999999999
Q ss_pred HHHHHHHHHHHhCC-CeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcc-cccceeeEEEcCHHHHH-HH
Q 014172 248 NLLDEIARIVAKHP-RLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYIAGPKHFVA-AC 324 (429)
Q Consensus 248 ~~l~~I~~~a~~~~-~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~R~G~v~~~~~~~~-~l 324 (429)
+++|.++|++|+ |++||+|++|... .....+.. .+.++++.|+||.++ ++| +||+++++++++ .+
T Consensus 156 --l~~i~~~~~~~~~~~~li~D~a~~~~----~~~~~~~~----~~~d~~~~s~~K~~~~~~G--~G~~~~~~~~~~~~l 223 (385)
T 2bkw_A 156 --LKAISQAIKQTSPETFFVVDAVCSIG----CEEFEFDE----WGVDFALTASQKAIGAPAG--LSISLCSSRFMDYAL 223 (385)
T ss_dssp --HHHHHHHHHHHCTTSEEEEECTTTTT----TSCCCTTT----TTCSEEEEESSSTTCCCSC--EEEEEECHHHHHHHT
T ss_pred --HHHHHHHHHhhCCCCEEEEECccccC----Cccccccc----cCceEEEecCccccccCCc--ceEEEEcHHHHHHHH
Confidence 889999999973 6999999999742 11112211 355689999999764 556 599999988776 43
Q ss_pred H----------------------HHhhc---ccCCCchHHHHHHHHHHhcCCCChHH-HHHHHHHHHHHHHHHHHHh-cc
Q 014172 325 N----------------------KIQSQ---FTSGASSISQKAGVAALGLGYAGGEV-VSKMVKAFRERRDFLVKSF-GE 377 (429)
Q Consensus 325 ~----------------------~~~~~---~~~~~~~~~q~aa~~~l~~~~~~~~~-~~~~~~~~~~~r~~l~~~L-~~ 377 (429)
. ..... ...+++...+.++.++++. ..++ +++.+++++++++++.+.| ++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~ 300 (385)
T 2bkw_A 224 NDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKE---ILEEGLHKRWDLHREMSDWFKDSLVNG 300 (385)
T ss_dssp CHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHH---HHHccHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 11110 0124666777777777764 2333 7788899999999999999 88
Q ss_pred CCCceeecCC-----ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 378 LEGVKMSEPQ-----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 378 l~g~~~~~p~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+ |+++..++ .++++|+.++ +..+++++|.+ .||.+
T Consensus 301 ~-g~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~l~~-~gi~v 340 (385)
T 2bkw_A 301 L-QLTSVSRYPSNMSAHGLTAVYVA--------------DPPDVIAFLKS-HGVVI 340 (385)
T ss_dssp T-CCEESSCSSSTTBCSSCEEEECS--------------CHHHHHHHHHH-TTEEC
T ss_pred c-CceecccCcccccCCceEEEecC--------------CHHHHHHHHHH-CCeEE
Confidence 8 88877532 4667888885 36788888865 59876
No 147
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.96 E-value=1.3e-28 Score=247.41 Aligned_cols=314 Identities=15% Similarity=0.093 Sum_probs=212.9
Q ss_pred cCCCeEEcCCCCC--CCC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCC-CcEEEecChHHHH
Q 014172 93 AGVSVIRLAAGEP--DFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTP-DQILVSNGAKQSI 168 (429)
Q Consensus 93 ~g~~~i~L~~g~~--~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-~~i~~t~G~~~al 168 (429)
.|+.++|++.|.+ +++ .|+.+.+++.+++.+. ..|+...|..++++++++++.+.++. .. ++|++|+|+++++
T Consensus 41 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~~v~~~~ggsea~ 117 (439)
T 3dxv_A 41 NGRELIDLSGAWGAASLGYGHPAIVAAVSAAAANP-AGATILSASNAPAVTLAERLLASFPG--EGTHKIWFGHSGSDAN 117 (439)
T ss_dssp TSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHSC-SCSCSSSSEEHHHHHHHHHHHHTTTC--TTTEEEEEESSHHHHH
T ss_pred CCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhc-cCccccccCCHHHHHHHHHHHHhCCC--CCCCEEEEeCCHHHHH
Confidence 4678999999987 444 5899999999998764 45665677888999999999888753 33 6999999999999
Q ss_pred HHHHHHh--cCCCCEEEEcCCCCCChHHHHHHcCCE-E--------------EEecCCCCCCCCC----CHHHHHhhc--
Q 014172 169 LQAVLAV--CSPGDEVIIPAPFWVSYPEMARIADAT-P--------------VILPTRISENFLL----DPKVLESKL-- 225 (429)
Q Consensus 169 ~~~l~~l--~~~gd~Vlv~~p~y~~~~~~~~~~g~~-~--------------~~v~~~~~~~~~~----d~e~l~~~l-- 225 (429)
..+++++ ..+++.|++.+|+|+++...+...+.. . ..++.+.. .... |++.|++++
T Consensus 118 ~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~le~~l~~ 196 (439)
T 3dxv_A 118 EAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPY-RNDPTGDAILTLLTEKLAA 196 (439)
T ss_dssp HHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSCB-TTBTTSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcc-cccccHHHHHHHHHHHHHh
Confidence 9999885 335678888899887665544443322 1 22333211 0011 689999998
Q ss_pred --ccCCcEEEEcCCCCCccCCCC-HHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccCh
Q 014172 226 --TEKSRLLILCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSK 302 (429)
Q Consensus 226 --~~~~~~i~l~~p~NPtG~~~~-~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 302 (429)
.+++++|+++.++|++|.+.+ .+.+++|.++|++| |+++|+||+|.++.+.+.. ...... +.... +.||||
T Consensus 197 ~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~-~~~li~DE~~~g~g~~g~~-~~~~~~-~~~~d---i~s~sK 270 (439)
T 3dxv_A 197 VPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAH-GILVVCDEVKVGLARSGRL-HCFEHE-GFVPD---ILVLGK 270 (439)
T ss_dssp SCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHT-TCEEEEECTTTCTTTTSSS-SGGGGT-TCCCS---EEEECG
T ss_pred cCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCchh-hHHHhc-CCCCC---EEEEcc
Confidence 456778888888888888665 45599999999999 9999999999976544421 111111 11122 339999
Q ss_pred hcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhc----cC
Q 014172 303 AFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG----EL 378 (429)
Q Consensus 303 ~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~----~l 378 (429)
.++ +|+|+||+++++++++.+.......++ .+.+++.++.++|+. .++ +++.++++++++++.+.|. .+
T Consensus 271 ~~~-~G~riG~~~~~~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~---~~~--~~~~~~~~~~~~~~~~~l~~~~~~~ 343 (439)
T 3dxv_A 271 GLG-GGLPLSAVIAPAEILDCASAFAMQTLH-GNPISAAAGLAVLET---IDR--DDLPAMAERKGRLLRDGLSELAKRH 343 (439)
T ss_dssp GGG-TTSCCEEEEEEHHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHH---HHH--TTHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhc-CCcceEEEEECHHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHH---HHh--cCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999 799999999999998877665444556 788999999888874 111 2334444445554544444 34
Q ss_pred CCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 379 EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 379 ~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.+...++.|.| +|+.+........ ....+..+++++|+++ ||.+
T Consensus 344 ~~~~~~~~~g~~-~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~-Gv~v 388 (439)
T 3dxv_A 344 PLIGDIRGRGLA-CGMELVCDRQSRE---PARAETAKLIYRAYQL-GLVV 388 (439)
T ss_dssp TTEEEEEEETTE-EEEEEEEETTTTE---ECHHHHHHHHHHHHHH-TEEC
T ss_pred CCeEEEEEEEEE-EEEEEecCccccC---CCHHHHHHHHHHHHHC-CcEE
Confidence 556666566555 6666621000000 0001367899999887 8875
No 148
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.96 E-value=1.7e-28 Score=246.20 Aligned_cols=314 Identities=12% Similarity=0.078 Sum_probs=210.9
Q ss_pred cCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+..+|+..|.+ +++. |+++.+++.+.+.+..+ + ...+..+++.++++.+.+.++. ++++|++|+|+++++.
T Consensus 41 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~-~~~~~~~~~~~l~~~la~~~~~--~~~~v~~~~gg~ea~~ 116 (433)
T 1zod_A 41 DGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDH-L-FSEMLSRPVVDLATRLANITPP--GLDRALLLSTGAESNE 116 (433)
T ss_dssp TCCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCCC-C-CTTCCCHHHHHHHHHHHHHSCT--TCCEEEEESCHHHHHH
T ss_pred CCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCcc-c-ccccCCHHHHHHHHHHHHhCCC--CcCEEEEeCchHHHHH
Confidence 4567899987764 4444 78999999998876422 2 2233456777788888777774 5689999999999999
Q ss_pred HHHHHhc--CCCCEEEEcCCCCCChHHHHHHc--------------CCEEEEecCCCCCCC--------CCCHHHHHhhc
Q 014172 170 QAVLAVC--SPGDEVIIPAPFWVSYPEMARIA--------------DATPVILPTRISENF--------LLDPKVLESKL 225 (429)
Q Consensus 170 ~~l~~l~--~~gd~Vlv~~p~y~~~~~~~~~~--------------g~~~~~v~~~~~~~~--------~~d~e~l~~~l 225 (429)
.+++.+. ..+|.|++.+|+|+++...+... |+..+.++......+ .+|++.|++++
T Consensus 117 ~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l 196 (433)
T 1zod_A 117 AAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLI 196 (433)
T ss_dssp HHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHH
Confidence 9988654 23589999999998766544322 333333332111112 23699999988
Q ss_pred c----cCCcEEEEcCC-CCCccC-CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEec
Q 014172 226 T----EKSRLLILCSP-SNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNG 299 (429)
Q Consensus 226 ~----~~~~~i~l~~p-~NPtG~-~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S 299 (429)
+ +++++|+ ++| +||||. +.+++++++|.++|++| |+++|+||+|.++.+.+.. ..+.... .. ..+.|
T Consensus 197 ~~~~~~~~~~vi-~~p~~~~~G~~~~~~~~l~~l~~l~~~~-~~~li~DEv~~~~g~~g~~-~~~~~~~-~~---~di~s 269 (433)
T 1zod_A 197 DRQSSGNLAAFI-AEPILSSGGIIELPDGYMAALKRKCEAR-GMLLILDEAQTGVGRTGTM-FACQRDG-VT---PDILT 269 (433)
T ss_dssp HHHCCSCEEEEE-ECSEETTTTCEECCTTHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSS-STHHHHT-CC---CSEEE
T ss_pred HhcCCCCeEEEE-EccccCCCCcccCCHHHHHHHHHHHHHh-CCEEEEeccccCCCcCchH-hHHhhcC-CC---CCEEE
Confidence 6 3455544 556 588996 67889999999999999 9999999999987554421 1111111 11 12458
Q ss_pred cChhcccccceeeEEEcCHHHHHHHHHHhhc--ccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 014172 300 FSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ--FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 377 (429)
Q Consensus 300 ~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~--~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 377 (429)
|||.++ .|+|+||+++++++++.+...... .+.+.+.+++.++.++|+. .++ +...++++++++++.+.|++
T Consensus 270 ~sK~~~-~G~~ig~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~---~~~--~~~~~~~~~~~~~l~~~l~~ 343 (433)
T 1zod_A 270 LSKTLG-AGLPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDV---VQR--DGLVARANVMGDRLRRGLLD 343 (433)
T ss_dssp ECHHHH-TTSSCEEEEECHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHH---HHH--TTHHHHHHHHHHHHHHHHHH
T ss_pred eccccc-CCCCeeEEEEhHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHH---HHh--CCHHHHHHHHHHHHHHHHHH
Confidence 999999 599999999999999888763222 4566789999998888874 121 23456667777777777765
Q ss_pred C----CCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 378 L----EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 378 l----~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+ +.+...++.|. |+|++++..... +.....+..+++++|+++ ||.+
T Consensus 344 l~~~~~~~~~~~~~g~-~~~i~~~~~~~~---~~~~~~~~~~~~~~l~~~-Gv~v 393 (433)
T 1zod_A 344 LMERFDCIGDVRGRGL-LLGVEIVKDRRT---KEPADGLGAKITRECMNL-GLSM 393 (433)
T ss_dssp HHHHCTTEEEEEEETT-EEEEEEEEETTT---TEECTTHHHHHHHHHHHT-TEEC
T ss_pred HHHhCCCeEEEEEEEE-EEEEEEecCccc---cCCChHHHHHHHHHHHHC-CCeE
Confidence 3 44445556555 468887531000 000001367899998865 9976
No 149
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.96 E-value=8.9e-29 Score=241.60 Aligned_cols=264 Identities=14% Similarity=0.156 Sum_probs=189.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCC--EEEEcCCCCCChH---HHHHHcC
Q 014172 126 TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGD--EVIIPAPFWVSYP---EMARIAD 200 (429)
Q Consensus 126 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd--~Vlv~~p~y~~~~---~~~~~~g 200 (429)
..|++..+..+|++++++++. .+..++++|+++++..++++++.+|| .|+++.++|.... ......|
T Consensus 41 ~~y~~~~~~~~l~~~la~~~~--------~~~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~g 112 (357)
T 3lws_A 41 DQYGTGAIIEPFEQKFADVLG--------MDDAVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQDGLKELHP 112 (357)
T ss_dssp EETTEETTHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHSS
T ss_pred ccccCChHHHHHHHHHHHHhC--------CCcEEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccchhhhccC
Confidence 458777788999999999874 13345557778899999999999988 6777776654332 2456779
Q ss_pred CEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCc-cCCCCHHHHHHHHHHHHhCCCeEEEEccCCccc--ccC
Q 014172 201 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPT-GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI--IYA 277 (429)
Q Consensus 201 ~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPt-G~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~--~~~ 277 (429)
++++.++. +++.+|+++|+++. ++++|++++||||| |.+++.+++++|+++|++| |++||+|++|... .+.
T Consensus 113 ~~~~~v~~---~~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~-~~~li~D~a~~~~~~~~~ 186 (357)
T 3lws_A 113 IETILVGA---ADRLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYCRER-GIRLHLDGARLFEMLPYY 186 (357)
T ss_dssp CEEEECSC---TTSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHT-TCEEEEEETTHHHHHHHH
T ss_pred cEEEEecC---CCCCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHHHHc-CCEEEEECchhhhhhhhc
Confidence 99999884 33569999999883 48999999999998 9999999999999999999 9999999998721 122
Q ss_pred CCCCCccccCCCCCCceEEEeccChhc-ccccceeeEEEcCHHHHHHHHHHhhcccCCC--chHHHHHHHHHHhcCCCCh
Q 014172 278 PATHTSFASLPGMWERTLTVNGFSKAF-AMTGWRLGYIAGPKHFVAACNKIQSQFTSGA--SSISQKAGVAALGLGYAGG 354 (429)
Q Consensus 278 ~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~--~~~~q~aa~~~l~~~~~~~ 354 (429)
+. +...+....+ +++.||||.+ ++.| ||+++++++++.+.+.......+. ....+.++..+|+.
T Consensus 187 ~~---~~~~~~~~~d--~~~~s~sK~~~~~~g---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----- 253 (357)
T 3lws_A 187 EK---TAAEIAGLFD--SIYISFYKGLGGIAG---AILAGPAAFCQTARIWKRRYGGDLISLYPYIVSADYYYEL----- 253 (357)
T ss_dssp TC---CHHHHHTTSS--EEEEESSSTTCCSSC---EEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH-----
T ss_pred CC---ChHHHHhcCC--EEEEeccccCCCCce---EEEEcCHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHH-----
Confidence 22 1222211122 4588999999 4333 999999999999887655443332 33344444455542
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCceee-cCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 355 EVVSKMVKAFRERRDFLVKSFGELEGVKMS-EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 355 ~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~-~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.+. .+++.++++++.+.|++++|+++. .|.+++|+|++++.... .+..++.+.|.++ ||.+
T Consensus 254 -~~~~-~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~-Gi~v 316 (357)
T 3lws_A 254 -RKDR-MGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAA---------DISPKLEQVQEET-GLGF 316 (357)
T ss_dssp -HTTC-HHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHH---------HHHHHHHHHHHHH-CEES
T ss_pred -HHHH-HHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCChH---------HHHHHHHHHHHhc-CeEE
Confidence 3322 344678889999999999899883 57778889999974200 0256777777655 9976
No 150
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.96 E-value=9.9e-28 Score=242.65 Aligned_cols=323 Identities=14% Similarity=0.047 Sum_probs=220.5
Q ss_pred cCCCeEEcCCC--CCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAG--EPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g--~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.+||+..| ...++. |+++.+++.+++.+..+.|+...+..++++++++++.+.++ .+.++|++|+|+++++.
T Consensus 48 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~ggseA~~ 125 (459)
T 4a6r_A 48 EGNKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELPFYNTFFKTTHPAVVELSSLLAEVTP--AGFDRVFYTNSGSESVD 125 (459)
T ss_dssp TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCTTSSSCCHHHHHHHHHHHHHSC--TTCCEEEEESSHHHHHH
T ss_pred CCCEEEECCCchhcccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHHHHH
Confidence 46789999988 455554 79999999999887554565556677899999999988876 35679999999999999
Q ss_pred HHHHHhcC--------CCCEEEEcCCCCCChHHHHHHcCC-------------EEEEecCCC--C-CCCCCC--------
Q 014172 170 QAVLAVCS--------PGDEVIIPAPFWVSYPEMARIADA-------------TPVILPTRI--S-ENFLLD-------- 217 (429)
Q Consensus 170 ~~l~~l~~--------~gd~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~--~-~~~~~d-------- 217 (429)
.+++++++ +++.|++.+|+|+++...+...+. .+..++... . +.+ .|
T Consensus 126 ~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~ 204 (459)
T 4a6r_A 126 TMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVA 204 (459)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHH
Confidence 99999875 579999999999998766655432 233333211 0 112 34
Q ss_pred HHHHHhhcc----cCCcEEEEcCCCCCccC-CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCC
Q 014172 218 PKVLESKLT----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 292 (429)
Q Consensus 218 ~e~l~~~l~----~~~~~i~l~~p~NPtG~-~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~ 292 (429)
+++|++.+. +++++|+++.++|++|. +++++++++|.++|++| |+++|+||+|.+|.+.|.. ........ ..
T Consensus 205 ~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~-~~llI~DEv~~g~gr~G~~-~~~~~~~~-~p 281 (459)
T 4a6r_A 205 ARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKY-DVLLVADEVICGFGRTGEW-FGHQHFGF-QP 281 (459)
T ss_dssp HHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSS-SHHHHHTC-CC
T ss_pred HHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCccccc-chHhhcCC-CC
Confidence 788888876 23444444444555665 55899999999999999 9999999999987655531 11111111 11
Q ss_pred ceEEEeccChhcccccceeeEEEcCHHHHHHHH---HHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHH-HHHHHHH
Q 014172 293 RTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN---KIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV-KAFRERR 368 (429)
Q Consensus 293 ~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~---~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~-~~~~~~r 368 (429)
.+.+|||.++..|+|+||+++++++++.+. ......+++.+.+++.++.++|+... .++.+++.+ +..+..+
T Consensus 282 ---di~t~sK~l~gg~~~lg~v~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~-~~~~~~~~~~~~~~~~~ 357 (459)
T 4a6r_A 282 ---DLFTAAKGLSSGYLPIGAVFVGKRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALR-DEGIVQRVKDDIGPYMQ 357 (459)
T ss_dssp ---SEEEECGGGGTTSSCCEEEEECHHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHH-HTCHHHHHHHTHHHHHH
T ss_pred ---CeeehhhhhcCCCCCccceeeCHHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHH
Confidence 144689999844499999999999999987 33344556788999999999997411 023455555 5555556
Q ss_pred HHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCC-CCChHHHHHHHHHhCCeec
Q 014172 369 DFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK-IENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 369 ~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~Ll~~~gV~v 428 (429)
+.+.+.|.+++.+...++.|.| +++++..... ....+.. .....++++.|+++ ||.+
T Consensus 358 ~~l~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~-Gv~v 415 (459)
T 4a6r_A 358 KRWRETFSRFEHVDDVRGVGMV-QAFTLVKNKA-KRELFPDFGEIGTLCRDIFFRN-NLIM 415 (459)
T ss_dssp HHHHHHHTTCTTEEEEEEETTE-EEEEECSBTT-TTBCCSSTTHHHHHHHHHHHHT-TEEC
T ss_pred HHHHHHHhcCCCeEEEEEEEEE-EEEEEecCcc-ccccccchHHHHHHHHHHHHHC-CeEE
Confidence 6665666666667777777765 5666643100 0000000 00156788888877 8875
No 151
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.96 E-value=1.4e-29 Score=247.33 Aligned_cols=291 Identities=12% Similarity=0.105 Sum_probs=209.5
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcC----CCCCCC---CCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecCh-HHH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREG----FTRYTP---NAGTLELRSAICHKLKEENGLSYTPDQILVSNGA-KQS 167 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~----~~~Y~~---~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~-~~a 167 (429)
.+++++.|.+ ++|+.+++++.+.+.+. ...|+. ..+..++.+.+.+++.+.+|.+ ++++|++|+|+ +++
T Consensus 3 ~~~~~~~g~~--~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~-~~~~v~~~~g~gt~a 79 (360)
T 1w23_A 3 QVFNFNAGPS--ALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIP-NDYQILFLQGGASLQ 79 (360)
T ss_dssp CCEECCSSSC--CCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHHH
T ss_pred ceEeecCCCc--CCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCceEEEECCcchHH
Confidence 4678888865 67889999998876431 112222 2344556677777777777753 45799999999 999
Q ss_pred HHHHHHHhcCC---CCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHh-hcccCCcEEEEcCCCCCccC
Q 014172 168 ILQAVLAVCSP---GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLES-KLTEKSRLLILCSPSNPTGS 243 (429)
Q Consensus 168 l~~~l~~l~~~---gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~-~l~~~~~~i~l~~p~NPtG~ 243 (429)
+.+++..++.+ ||.|+++.++|..+ ..++..| +++.+++++++++ +|++++++ ++++++|+|++++|+||||.
T Consensus 80 l~~~~~~l~~~~~~g~~vi~~~~~~~~~-~~~~~~g-~~~~v~~~~~~~~-~d~~~l~~~~i~~~~k~v~~~~~~nptG~ 156 (360)
T 1w23_A 80 FTMLPMNLLTKGTIGNYVLTGSWSEKAL-KEAKLLG-ETHIAASTKANSY-QSIPDFSEFQLNENDAYLHITSNNTIYGT 156 (360)
T ss_dssp HHHHHHHHCCTTCEEEEEECSHHHHHHH-HHHHTTS-EEEEEEECGGGTS-CSCCCGGGCCCCTTEEEEEEESEETTTTE
T ss_pred HHHHHHHhcCCCCcccEEEecchhHHHH-HHHHHhC-CeEEeecccccCc-CCccchHhhccCCCCCEEEEeCCCCCcce
Confidence 99999999865 56777777776543 3467789 9999998753333 79999999 88889999999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHH
Q 014172 244 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA 323 (429)
Q Consensus 244 ~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~ 323 (429)
+++ ++. ++| |++||+|++|..+.. ..++..+ .++++|+||.+|++| +||+++++++++.
T Consensus 157 ~~~--~i~------~~~-~~~li~D~a~~~~~~----~~~~~~~------di~~~s~sK~~~~~G--~G~~~~~~~~~~~ 215 (360)
T 1w23_A 157 QYQ--NFP------EIN-HAPLIADMSSDILSR----PLKVNQF------GMIYAGAQKNLGPSG--VTVVIVKKDLLNT 215 (360)
T ss_dssp ECS--SCC------CCC-SSCEEEECTTTTTSS----CCCGGGC------SEEEEETTTTTSCTT--CEEEEEEHHHHCS
T ss_pred ecc--ccc------ccC-CceEEEechhhcCCC----CcCcccC------CEEEEEcccccCCCC--cEEEEEcHHHHhh
Confidence 987 222 278 999999999987431 1122221 388999999999666 8999999988765
Q ss_pred HHHHh------------hcccCCCchHHHHHHHHHHhcCCCChH--HHHHHHHHHHHHHHHHHHHhccCCCc-eee-cC-
Q 014172 324 CNKIQ------------SQFTSGASSISQKAGVAALGLGYAGGE--VVSKMVKAFRERRDFLVKSFGELEGV-KMS-EP- 386 (429)
Q Consensus 324 l~~~~------------~~~~~~~~~~~q~aa~~~l~~~~~~~~--~~~~~~~~~~~~r~~l~~~L~~l~g~-~~~-~p- 386 (429)
+.... .....+++...+.++..+++. ..+ ++++++++++++++++.+.|++++++ ... .|
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 292 (360)
T 1w23_A 216 KVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDW---IKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKG 292 (360)
T ss_dssp CCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHH---HHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGG
T ss_pred cccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHH---HHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCCch
Confidence 54321 011234566666677777764 222 67889999999999999999998655 543 23
Q ss_pred -CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 387 -QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 387 -~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+++++|++++.. .+..++.++|.+ .||.+
T Consensus 293 ~~~~~~~~~~~~~~-----------~~~~~~~~~l~~-~gi~~ 323 (360)
T 1w23_A 293 SRSLMNVTFNLRNE-----------ELNQQFLAKAKE-QGFVG 323 (360)
T ss_dssp GBCSSEEEEECSSH-----------HHHHHHHHHHHH-TTEES
T ss_pred hccCcEEEEEcCCC-----------ccHHHHHHHHHH-CCeee
Confidence 3566899998742 145678888765 48875
No 152
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.96 E-value=5e-28 Score=241.10 Aligned_cols=291 Identities=12% Similarity=0.136 Sum_probs=211.4
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCC----CCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTP----NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 171 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~----~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~ 171 (429)
+.+.|+.+.+. +.|+.+.+++.+.+...+..+.. ..|..+..+.+.+.+.+.+| .++++|++|+|+++++..+
T Consensus 28 ~~~yld~~~~~-~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~~~v~~~~g~t~al~~a 104 (416)
T 1qz9_A 28 GVIYLDGNSLG-ARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIG--ARDGEVVVTDTTSINLFKV 104 (416)
T ss_dssp TCEECCTTTSC-CCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTT--CCTTSEEECSCHHHHHHHH
T ss_pred CeEeecCCCcC-CCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHcC--CCcccEEEeCChhHHHHHH
Confidence 47899988876 56788999999988753222211 11223444445555555556 3568999999999999988
Q ss_pred HHHhc------CCCCE-EEEcCCCCCChHHHH----HHc--CCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCC
Q 014172 172 VLAVC------SPGDE-VIIPAPFWVSYPEMA----RIA--DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPS 238 (429)
Q Consensus 172 l~~l~------~~gd~-Vlv~~p~y~~~~~~~----~~~--g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~ 238 (429)
+.+++ ++||+ |+++.++|+++...+ +.. |++++.++. +++|++++++++++|++++|+
T Consensus 105 l~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~~~l~~~i~~~~~~v~~~~~~ 175 (416)
T 1qz9_A 105 LSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS---------PEELPQAIDQDTAVVMLTHVN 175 (416)
T ss_dssp HHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS---------GGGHHHHCSTTEEEEEEESBC
T ss_pred HHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc---------HHHHHHHhCCCceEEEEeccc
Confidence 88876 89987 555556777655433 334 999999885 788889898889999999999
Q ss_pred CCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccccccee-eEEEcC
Q 014172 239 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGP 317 (429)
Q Consensus 239 NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~-G~v~~~ 317 (429)
||||.+++ +++|.++|++| |+++|+|++|.. +.....+.. .+..+++.|++|.++ +|+++ ||++++
T Consensus 176 nptG~~~~---l~~i~~l~~~~-~~~li~D~a~~~----g~~~~~~~~----~~~d~~~~s~~K~l~-~g~~~~g~l~~~ 242 (416)
T 1qz9_A 176 YKTGYMHD---MQALTALSHEC-GALAIWDLAHSA----GAVPVDLHQ----AGADYAIGCTYKYLN-GGPGSQAFVWVS 242 (416)
T ss_dssp TTTCBBCC---HHHHHHHHHHH-TCEEEEECTTTT----TTSCCCHHH----HTCSEEEECSSSTTC-CCTTCCCEEEEC
T ss_pred cCcccccC---HHHHHHHHHHc-CCEEEEEccccc----cCcCCChhh----cCCCEEEecCcccCC-CCCCCeEEEEEC
Confidence 99999999 89999999999 999999999974 222212222 234588999999985 78888 999999
Q ss_pred HHHHHHHHHHh-----------------------hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHH
Q 014172 318 KHFVAACNKIQ-----------------------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKS 374 (429)
Q Consensus 318 ~~~~~~l~~~~-----------------------~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~ 374 (429)
+++++.+.... .....+++...+.++.++++.. .++++++++++++++++++.+.
T Consensus 243 ~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~ 320 (416)
T 1qz9_A 243 PQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVF--AQTDMASLRRKSLALTDLFIEL 320 (416)
T ss_dssp TTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHH--TTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHHHHHH
Confidence 88766554321 1112245666666666777641 1245788899999999999999
Q ss_pred hccC-C--CceeecCC----ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 375 FGEL-E--GVKMSEPQ----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 375 L~~l-~--g~~~~~p~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|+++ + |+++..+. .+.++|++++ +..+++++|.++ ||.+
T Consensus 321 L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--------------~~~~l~~~l~~~-gi~~ 366 (416)
T 1qz9_A 321 VEQRCAAHELTLVTPREHAKRGSHVSFEHP--------------EGYAVIQALIDR-GVIG 366 (416)
T ss_dssp HHHHHTTSCCEECSCSSGGGBCSEEEEECT--------------THHHHHHHHHTT-TEEC
T ss_pred HHhhccCCCeEEeCCCCHHHcCCEEEEecC--------------CHHHHHHHHHhC-CcEe
Confidence 9885 7 88887664 2456888885 367899888765 8864
No 153
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.96 E-value=4.6e-28 Score=244.64 Aligned_cols=320 Identities=16% Similarity=0.109 Sum_probs=220.7
Q ss_pred cCCCeEEcCCC--CCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAG--EPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g--~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.+||+..| .+.++. |+.+.+++.+++.+. ..|+...+..+++.++++++.+.++.. ..++|++|+|++++++
T Consensus 62 ~G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~~~sGseA~~ 139 (453)
T 4ffc_A 62 DGNSFIDLGAGIAVTTVGASHPAVAAAIADQATHF-THTCFMVTPYEQYVQVAELLNALTPGD-HDKRTALFNSGAEAVE 139 (453)
T ss_dssp TSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHC-SCCTTTTSCCHHHHHHHHHHHHHSSCS-SCEEEEEESSHHHHHH
T ss_pred CCCEEEEcCCCcccCcCCCCCHHHHHHHHHHHHhc-cccccCcCCCHHHHHHHHHHHHhCCCC-CCcEEEEeCcHHHHHH
Confidence 47789999988 445554 899999999998764 446655677888889999988877632 2579999999999999
Q ss_pred HHHHHhcC--CCCEEEEcCCCCCChHHHHHHcCC--------------EEEEecCCC--CCCCCCC--------HHHHHh
Q 014172 170 QAVLAVCS--PGDEVIIPAPFWVSYPEMARIADA--------------TPVILPTRI--SENFLLD--------PKVLES 223 (429)
Q Consensus 170 ~~l~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~--------------~~~~v~~~~--~~~~~~d--------~e~l~~ 223 (429)
.+++.... .++.|++.+++|+++...+...+. .+..++... .+.++.+ ++.|++
T Consensus 140 ~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~ 219 (453)
T 4ffc_A 140 NAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIET 219 (453)
T ss_dssp HHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHH
Confidence 99987653 458999999999988766554432 345555431 1112233 466777
Q ss_pred hcccCCcEEEEcCCCCCcc--CCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccC
Q 014172 224 KLTEKSRLLILCSPSNPTG--SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFS 301 (429)
Q Consensus 224 ~l~~~~~~i~l~~p~NPtG--~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 301 (429)
.+.++..+++++.|+|++| .+.+++.+++|.++|++| |+++|+||+|.+|.+.|.. ...... +....+.|||
T Consensus 220 ~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~-~~llI~DEv~~g~g~~g~~-~a~~~~----~~~pdi~t~s 293 (453)
T 4ffc_A 220 QIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASEN-GVVFIADEVQTGFARTGAW-FASEHE----GIVPDIVTMA 293 (453)
T ss_dssp HTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSS-STHHHH----TCCCSEEEEC
T ss_pred hcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHc-CCEEEEecCccCCCccccc-chhhhc----CCCcchHhhh
Confidence 7766667788888888777 555788899999999999 9999999999987554431 111111 1222356799
Q ss_pred hhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCc
Q 014172 302 KAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV 381 (429)
Q Consensus 302 K~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~ 381 (429)
|.++. |+|+||+++++++++.+.......+++.+.++|.++.++|+... .++.+++.++..+..++.+.+.+.+++++
T Consensus 294 K~~~~-G~~~G~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 371 (453)
T 4ffc_A 294 KGIAG-GMPLSAVTGRAELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMR-ELDLPARARAIEASVTSRLSALAEEVDII 371 (453)
T ss_dssp GGGGT-TSSCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHHHHHHCSSE
T ss_pred hhhcC-CcCeEEEEECHHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhh-hhhHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 99994 99999999999999888766666677889999999999987411 02334444444444455555555556656
Q ss_pred eeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 382 KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 382 ~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
...++.|. |+|+.+....... .......++++.|+++ ||.+
T Consensus 372 ~~~~~~g~-~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~-Gv~v 412 (453)
T 4ffc_A 372 GEVRGRGA-MLAIEIVKPGTLE----PDAALTKSIAAEALSQ-GVLI 412 (453)
T ss_dssp EEEEEETT-EEEEEEBCTTSCC----BCHHHHHHHHHHHHHT-TEEC
T ss_pred EEEEeece-EEEEEEecCcccC----CCHHHHHHHHHHHHhC-CCEE
Confidence 55555555 4777763210000 0001366788888876 8876
No 154
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.96 E-value=5.7e-28 Score=245.81 Aligned_cols=325 Identities=13% Similarity=0.098 Sum_probs=229.8
Q ss_pred CcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCC-C------CCCCCCCHHHHHH
Q 014172 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFT-R------YTPNAGTLELRSA 140 (429)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~-~------Y~~~~G~~~lr~~ 140 (429)
++++++.+.++.+..+.....+. .+.|+|..+++. +|+.+.+++.+.+.+.+. + |+...+..++++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~----~~~i~L~a~e~~--~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~ 94 (483)
T 1rv3_A 21 LAQPLKDSDAEVYDIIKKESNRQ----RVGLELIASENF--ASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETL 94 (483)
T ss_dssp TTSCHHHHCHHHHHHHHHHHHHH----HSSEECCTTCCC--CCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHH
T ss_pred HhhhhhhcCHHHHHHHHHHHHHh----hcCeEEEcCCCC--CCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHH
Confidence 45567776665544444333322 357999888864 678999999888765321 2 3333345788888
Q ss_pred HHHHHHhhcCCCCCC--CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH--------HHHHcC--CEEEEecC
Q 014172 141 ICHKLKEENGLSYTP--DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE--------MARIAD--ATPVILPT 208 (429)
Q Consensus 141 ia~~l~~~~g~~~~~--~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g--~~~~~v~~ 208 (429)
+.+++.+.+|.+.+. .+|++++|+ +++..++.++++|||+|++++|.|.++.. .++..| .+++.+++
T Consensus 95 ~~~~~a~~~g~~~~~~~~~V~~~sGs-~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~ 173 (483)
T 1rv3_A 95 CQKRALQAYGLDPQCWGVNVQPYSGS-PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKV 173 (483)
T ss_dssp HHHHHHHHTTCCTTTEEEECCCSSHH-HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECB
T ss_pred HHHHHHHHhCCCcccCceEEEECCcH-HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECcc
Confidence 999999999965322 248888888 88888899999999999999999888753 234445 56666655
Q ss_pred CCCCCCCCCHHHHHhhcc-cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCc-ccccCCCCCCcccc
Q 014172 209 RISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE-HIIYAPATHTSFAS 286 (429)
Q Consensus 209 ~~~~~~~~d~e~l~~~l~-~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~-~~~~~~~~~~~~~~ 286 (429)
++ +++.+|+++|+++++ +++|+|++ +++||+ .+++ +++|.++|++| |+++|+|++|. ++.+.+....++ .
T Consensus 174 ~~-~~~~iD~d~le~~i~~~~tklIi~-~~sn~~-~~~d---l~~i~~ia~~~-g~~livD~ah~~g~~~~~~~~~p~-~ 245 (483)
T 1rv3_A 174 NP-DTGYIDYDRLEENARLFHPKLIIA-GTSCYS-RNLD---YGRLRKIADEN-GAYLMADMAHISGLVVAGVVPSPF-E 245 (483)
T ss_dssp CT-TTCSBCHHHHHHHHHHHCCSEEEE-CCSSCC-SCCC---HHHHHHHHHHT-TCEEEEECTTTHHHHHHTSSCCGG-G
T ss_pred cc-CCCcCCHHHHHHHHhhcCCcEEEE-eCCcCC-CcCC---HHHHHHHHHHc-CCEEEEEccchhcccccCCCCCCC-C
Confidence 54 357899999999998 79999999 999998 8888 89999999999 99999999987 344433222222 1
Q ss_pred CCCCCCceEEEeccChhcccccceeeEEEcCHH---------------HHHHHHHHhhcc-cCCCchHHHHHHHHHHhcC
Q 014172 287 LPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH---------------FVAACNKIQSQF-TSGASSISQKAGVAALGLG 350 (429)
Q Consensus 287 ~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~---------------~~~~l~~~~~~~-~~~~~~~~q~aa~~~l~~~ 350 (429)
...+++.|+||++ +|+|.||++++++ +.+.+....... ..+++.....+...++...
T Consensus 246 -----~~div~~s~~K~l--~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~ 318 (483)
T 1rv3_A 246 -----HCHVVTTTTHKTL--RGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQA 318 (483)
T ss_dssp -----TCSEEEEESSGGG--CCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHH
T ss_pred -----CCcEEEecCcccC--CCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHH
Confidence 2348899999987 6899999998864 334443332222 2234444444555566531
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCC-ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 351 YAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ-GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 351 ~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
...+++++.++++++++++.+.|.++ |+++..+. .++++|++++.. + .+..++.+.| ++.||.+
T Consensus 319 --~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~-g---------~~~~~~~~~L-~~~gI~v 383 (483)
T 1rv3_A 319 --MTPEFKEYQRQVVANCRALSAALVEL-GYKIVTGGSDNHLILVDLRSK-G---------TDGGRAEKVL-EACSIAC 383 (483)
T ss_dssp --TSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEEGGGG-T---------CCHHHHHHHH-HHTTEEC
T ss_pred --hChhHHHHHHHHHHHHHHHHHHHHhc-CCEeccCCCCCceEEEeccCC-C---------CCHHHHHHHH-HhCCcEE
Confidence 13567889999999999999999998 99887653 457789988642 1 2566666554 6679976
No 155
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.96 E-value=6.1e-27 Score=236.39 Aligned_cols=322 Identities=11% Similarity=0.003 Sum_probs=228.5
Q ss_pred HHHHHHHHHHH-hcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCC---C
Q 014172 81 VAITDQATALA-QAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTP---D 156 (429)
Q Consensus 81 ~~~~~~~~~~~-~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~---~ 156 (429)
.++.+...++. ..+...+++....+ ...++.+.+++.+++.....+|...++..++++++.+++.+.+|.+.+. .
T Consensus 26 ~~v~~~~~~~~~~~~~~~~~~~~f~~-~~~~~~v~e~~~~a~~~~~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~ 104 (452)
T 2dgk_A 26 DVAFQIINDELYLDGNARQNLATFCQ-TWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQA 104 (452)
T ss_dssp HHHHHHHHHHGGGSCCCTTBCSCCSC-CCCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCC
T ss_pred HHHHHHHHHHhcCCCCCccCCCCeeC-CCchHHHHHHHHHHhccCCCChhhChhHHHHHHHHHHHHHHHhCCCcccccCC
Confidence 34555555443 34433344444444 2345788888888876555667667788899999999999999964321 1
Q ss_pred cEEEecChHHHHHHHHHHhcC--------CC-----CEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHh
Q 014172 157 QILVSNGAKQSILQAVLAVCS--------PG-----DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLES 223 (429)
Q Consensus 157 ~i~~t~G~~~al~~~l~~l~~--------~g-----d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~ 223 (429)
.+++|+|+++++.+++.++++ +| ++|++++ +|..+...++..|++++.+|+++ +++.+|+++|++
T Consensus 105 ~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~ 182 (452)
T 2dgk_A 105 VGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRP-GQLFMDPKRMIE 182 (452)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBT-TBCSCCHHHHHH
T ss_pred ceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCC-CCCeECHHHHHH
Confidence 499999999999999888764 55 5999999 99999999999999999999864 357899999999
Q ss_pred hcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHh------CCCeEEEEccCCccccc---CCCCCCccccCCCCCCce
Q 014172 224 KLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK------HPRLLVLSDEIYEHIIY---APATHTSFASLPGMWERT 294 (429)
Q Consensus 224 ~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~------~~~i~vi~Deay~~~~~---~~~~~~~~~~~~~~~~~~ 294 (429)
++++++++|++++|+||||.+.+ +++|.++|++ + ++++++|++|+.+.. .+..... +. ..+..
T Consensus 183 ~i~~~t~~v~~~~~~n~tG~~~~---l~~I~~ia~~~~~~~~~-~~~l~vD~a~~~~~~~~~~~~~~~~---~~-~~~~d 254 (452)
T 2dgk_A 183 ACDENTIGVVPTFGVTYTGNYEF---PQPLHDALDKFQADTGI-DIDMHIDAASGGFLAPFVAPDIVWD---FR-LPRVK 254 (452)
T ss_dssp HCCTTEEEEECBBSCTTTCBBCC---HHHHHHHHHHHHHHHCC-CCCEEEECTTGGGTHHHHCTTCCCS---TT-STTEE
T ss_pred HHhhCCEEEEEEcCCcCCcccCC---HHHHHHHHHHHhhccCC-CCcEEEEcccHHHHHHhhCccchhh---cC-CCCCc
Confidence 99999999999999999999998 8899999998 5 899999999998653 2211111 11 12445
Q ss_pred EEEeccChhcccccceeeEEEcCH-HHH-HHHHHHhhcc---------cCCC---chHHHHHHHHHHhcCCCChHHHHHH
Q 014172 295 LTVNGFSKAFAMTGWRLGYIAGPK-HFV-AACNKIQSQF---------TSGA---SSISQKAGVAALGLGYAGGEVVSKM 360 (429)
Q Consensus 295 i~~~S~SK~~~~~G~R~G~v~~~~-~~~-~~l~~~~~~~---------~~~~---~~~~q~aa~~~l~~~~~~~~~~~~~ 360 (429)
+++.|++| +++.|+++||+++.+ +++ +.+....... ..+. ..+.+.++...+. .+.++++
T Consensus 255 ~~~~~~hK-~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg-----~~g~~~~ 328 (452)
T 2dgk_A 255 SISASGHK-FGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLG-----REGYTKV 328 (452)
T ss_dssp EEEEETTT-TTCCCSSCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHH-----HHHHHHH
T ss_pred EEEECccc-ccCCCCCeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHh-----HHHHHHH
Confidence 67888999 556899999999854 332 3321111110 0011 3344555554443 4567888
Q ss_pred HHHHHHHHHHHHHHhccCCCceeecC-----CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 361 VKAFRERRDFLVKSFGELEGVKMSEP-----QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 361 ~~~~~~~r~~l~~~L~~l~g~~~~~p-----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+++.++++++.+.|++++++++..| ..++ +.++++.... ...+..++.++|.++ ||.+
T Consensus 329 ~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~-v~f~~~~~~~-------~~~~~~~l~~~L~~~-Gi~v 392 (452)
T 2dgk_A 329 QNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPA-VCFKLKDGED-------PGYTLYDLSERLRLR-GWQV 392 (452)
T ss_dssp HHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSE-EEEEECTTCC-------CSCCHHHHHHHHHHT-TCBC
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEE-EEEEecCccc-------ccCCHHHHHHHHHhc-CCee
Confidence 99999999999999999978888743 3444 5566653100 001457899998876 8754
No 156
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.96 E-value=7.7e-27 Score=230.86 Aligned_cols=288 Identities=18% Similarity=0.255 Sum_probs=207.4
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCC-CCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYT-PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~-~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~ 173 (429)
+++++|..|.|.++ +++.+++.+.+..+ .|+ +..+..+||+++++++. .+++++++|+++++..++.
T Consensus 22 ~~~~~l~~~~p~~~--~~~~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~~--------~~~~i~~~~gt~al~~~l~ 89 (391)
T 3dr4_A 22 SDLPRISVAAPRLD--GNERDYVLECMDTT--WISSVGRFIVEFEKAFADYCG--------VKHAIACNNGTTALHLALV 89 (391)
T ss_dssp ------CCCCCCCC--SSHHHHHHHHHHHT--CCSSCSHHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHH
T ss_pred CCCceeccCCCCCC--HHHHHHHHHHHHcC--CccCCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHH
Confidence 35899999998764 67888888887764 454 66788999999999974 2378999999999999999
Q ss_pred Hh-cCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHH
Q 014172 174 AV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 252 (429)
Q Consensus 174 ~l-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~ 252 (429)
++ +++||+|+++.|+|.++...++..|++++.+++++ +++.+|++.+++++++++++|+ ++||||.+.+ +++
T Consensus 90 ~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~---~~n~tG~~~~---~~~ 162 (391)
T 3dr4_A 90 AMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDP-RTFNLDAAKLEALITPRTKAIM---PVHLYGQICD---MDP 162 (391)
T ss_dssp HHTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCGGGSGGGCCTTEEEEC---CBCGGGCCCC---HHH
T ss_pred HcCCCCcCEEEECCCchHHHHHHHHHCCCEEEEEecCc-cccCcCHHHHHHhcCCCceEEE---EECCCCChhh---HHH
Confidence 99 99999999999999999999999999999999875 3477999999999998888877 6789999988 899
Q ss_pred HHHHHHhCCCeEEEEccCCcccc-cCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcC-HHHHHHHHHHhhc
Q 014172 253 IARIVAKHPRLLVLSDEIYEHII-YAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQ 330 (429)
Q Consensus 253 I~~~a~~~~~i~vi~Deay~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~-~~~~~~l~~~~~~ 330 (429)
|.++|++| |+++|+|++|.... +.+. ....+. .+.+.||||..+++|.+.||++++ +++.+.+......
T Consensus 163 i~~l~~~~-~~~li~D~a~~~g~~~~~~---~~~~~~-----di~~~S~s~~K~l~~g~gg~~~~~~~~~~~~~~~~~~~ 233 (391)
T 3dr4_A 163 ILEVARRH-NLLVIEDAAEAVGATYRGK---KSGSLG-----DCATFSFFGNAIITTGEGGMITTNDDDLAAKMRLLRGQ 233 (391)
T ss_dssp HHHHHHHT-TCEEEEECTTCTTCEETTE---ETTSSS-----SEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHHBT
T ss_pred HHHHHHHc-CCEEEEECcccccceECCe---eecccC-----CEEEEECCCCCcCCcCCeEEEEECCHHHHHHHHHHHhc
Confidence 99999999 99999999998633 3221 111111 277888773333455678998876 4577776655422
Q ss_pred cc--------------CCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC------CceE
Q 014172 331 FT--------------SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP------QGAF 390 (429)
Q Consensus 331 ~~--------------~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p------~~~~ 390 (429)
.. ...+.+. ++..... .+.+++..++.+++++++.+.|+++ |+++..+ ..++
T Consensus 234 g~~~~~~~~~~~~g~~~~~~~l~--aa~~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 305 (391)
T 3dr4_A 234 GMDPNRRYWFPIVGFNYRMTNIQ--AAIGLAQ-----LERVDEHLAARERVVGWYEQKLARL-GNRVTKPHVALTGRHVF 305 (391)
T ss_dssp TCCTTSTTCCSSCCCBCBCCHHH--HHHHHHH-----HHTHHHHHHHHHHHHHHHHHHHGGG-TTSEECCCCCTTSCCCC
T ss_pred CCCCCCcccccccccccCCCHHH--HHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhhcC-CccccCcCCCCCCccee
Confidence 11 1222322 2222222 2345667777888888999999988 8777654 2232
Q ss_pred -EEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 391 -YLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 391 -~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+++.++...+ .+..++.++|.++ ||.+
T Consensus 306 ~~~~i~~~~~~~---------~~~~~l~~~L~~~-GI~v 334 (391)
T 3dr4_A 306 WMYTVRLGEGLS---------TTRDQVIKDLDAL-GIES 334 (391)
T ss_dssp SSEEEEECSSCS---------SCHHHHHHHHHHT-TCCC
T ss_pred EEEEEEECCccc---------hhHHHHHHHHHHC-CCce
Confidence 34666654100 3688999998776 8875
No 157
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.96 E-value=1.3e-28 Score=249.21 Aligned_cols=329 Identities=15% Similarity=0.140 Sum_probs=223.3
Q ss_pred ccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCC------CCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHH
Q 014172 70 PRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP------DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICH 143 (429)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~------~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~ 143 (429)
.|++.++++.+..+..+.+.+...|.+.++|..|.+ ++++ +.+.+++.+++..+...|++..+..+|++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ylD~~~~~~~-~~v~~a~~~~l~~~~~~y~~~~~~~~l~~~la~ 85 (467)
T 2oqx_A 7 FRIRVIEPVKRTTRAYREEAIIKSGMNPFLLDSEDVFIDLLTDSGT-GAVTQSMQAAMMRGDEAYSGSRSYYALAESVKN 85 (467)
T ss_dssp SCCCCCCCCCCCCHHHHHHHHHHTTSCGGGSCGGGCSEECSCCSSC-SCCCHHHHHHTTSCCCCSSSCHHHHHHHHHHHH
T ss_pred hheeeecccccccHHHHHHHHHHcCCCceeccCCCeeEecccCCCc-HHHHHHHHHHhccCcceeccCchhHHHHHHHHH
Confidence 567777888776666777777777777777777764 3333 677888888776555678888888999999999
Q ss_pred HHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCC-----C----CEEEEcCCCCCChHHHHHHcCCEEEEecC----CC
Q 014172 144 KLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSP-----G----DEVIIPAPFWVSYPEMARIADATPVILPT----RI 210 (429)
Q Consensus 144 ~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~-----g----d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~----~~ 210 (429)
++. .+++++|+|+++++..++++++++ | |+|++..+.|.++.......|+.++.... +.
T Consensus 86 ~~~--------~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~ 157 (467)
T 2oqx_A 86 IFG--------YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDT 157 (467)
T ss_dssp HHC--------CSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCT
T ss_pred HhC--------cCcEEEcCCcHHHHHHHHHHHhccccccCCCCccceEEecccccccchhhhhccCcceeeccccccccC
Confidence 973 368999999999999999999888 8 99888754445556667777887765421 11
Q ss_pred C----CCCCCCHHHHHhhcc----cCCcEEEEcCCCCCc-cCCCCHHHHHHHHHHHHhCCCeEEEEccCCcc--------
Q 014172 211 S----ENFLLDPKVLESKLT----EKSRLLILCSPSNPT-GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-------- 273 (429)
Q Consensus 211 ~----~~~~~d~e~l~~~l~----~~~~~i~l~~p~NPt-G~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~-------- 273 (429)
. .++.+|++.|+++++ +++++|++++|+||| |.+++.+++++|.++|++| |+++|+|+++..
T Consensus 158 ~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~-gi~li~D~a~~~e~~~~~~~ 236 (467)
T 2oqx_A 158 GVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKY-DIPVVMDSARFAENAYFIKQ 236 (467)
T ss_dssp TSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHT-TCCEEEECTTHHHHHHHHHH
T ss_pred CCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHc-CCEEEEEchhhhhhhhhccc
Confidence 1 235689999999997 379999999999998 9999999999999999999 999999976643
Q ss_pred --cccCCCCCCccccCC----CCCCceEEEeccChhcccc-cceeeEEEcCHH-HHHHHHHHhhc---c----cCC-Cch
Q 014172 274 --IIYAPATHTSFASLP----GMWERTLTVNGFSKAFAMT-GWRLGYIAGPKH-FVAACNKIQSQ---F----TSG-ASS 337 (429)
Q Consensus 274 --~~~~~~~~~~~~~~~----~~~~~~i~~~S~SK~~~~~-G~R~G~v~~~~~-~~~~l~~~~~~---~----~~~-~~~ 337 (429)
..+.+. +...+. ...+ +++.|+||.++++ | ||++++++ +++.+.++... . ..+ .+.
T Consensus 237 ~~~~~~g~---~~~~~~~~~~~~~d--~~~~s~sK~~g~~~G---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (467)
T 2oqx_A 237 REAEYKDW---TIEQITRETYKYAD--MLAMSAKKDAMVPMG---GLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEG 308 (467)
T ss_dssp HCGGGTTS---CHHHHHHHHGGGCS--EEEEESSSTTCCSSC---EEEEECSGGGHHHHHHHHHHHHHTTSSCCCCCCCH
T ss_pred ccccccCc---cHHHHhhhhhccCC--eEEEecccccCCCCc---eEEEecChhHHHHHHHHHHhhhccCCcccccchhh
Confidence 123332 222211 1122 4578999999876 4 88888766 55544433221 1 111 122
Q ss_pred HHHHHHHHHHhcCCCChHHH-HHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCcc-CCcccCCCCCCChHH
Q 014172 338 ISQKAGVAALGLGYAGGEVV-SKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYY-GSEAEGFGKIENSES 415 (429)
Q Consensus 338 ~~q~aa~~~l~~~~~~~~~~-~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~ 415 (429)
....+....+. +++ ++..+.+.++++++.+.|+++ |+++. |.+++++|++++..+ +..... .+..+
T Consensus 309 ~~~~al~~~l~------~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 376 (467)
T 2oqx_A 309 GAMERLAVGLY------DGMNLDWLAYRIAQVQYLVDGLEEI-GVVCQ-QAGGHAAFVDAGKLLPHIPADQ----FPAQA 376 (467)
T ss_dssp HHHHHHHHHHH------HTTCHHHHHHHHHHHHHHHHHHHHT-TCCEE-EECSSCEEEEHHHHSTTSCGGG----CHHHH
T ss_pred hHHHHHHHhhH------hhhhHHHHHHHHHHHHHHHHHHHHC-CCeee-cCCceEEEEechhhcccCCccc----ccHHH
Confidence 22222222222 122 123445567888999999888 88888 888899999985210 000000 01456
Q ss_pred HHHHHHHhCCeec
Q 014172 416 LCRYLLDKAQVLL 428 (429)
Q Consensus 416 ~~~~Ll~~~gV~v 428 (429)
++++|+++.||.+
T Consensus 377 l~~~L~~~~gv~~ 389 (467)
T 2oqx_A 377 LACELYKVAGIRA 389 (467)
T ss_dssp HHHHHHHHHCEEC
T ss_pred HHHHHHHhcCcee
Confidence 6888856669876
No 158
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.95 E-value=4.2e-27 Score=234.81 Aligned_cols=323 Identities=14% Similarity=0.116 Sum_probs=208.9
Q ss_pred CcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCC-CCC-----CCCCCCHHHHHHH
Q 014172 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGF-TRY-----TPNAGTLELRSAI 141 (429)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~-~~Y-----~~~~G~~~lr~~i 141 (429)
+++++..+.++....+.+..++. .+.|+|..+++.. |+.+.+++.+.+.+.+ ..| .+.....+..+.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (425)
T 3ecd_A 9 FSQSLAERDASVRGAILKELERQ----QSQVELIASENIV--SRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEAL 82 (425)
T ss_dssp HHCCHHHHCHHHHHHHHHHHHHH----HHSEECCTTCCCC--CHHHHHHHTSGGGSSCTTC------------CCHHHHH
T ss_pred HHHHHHhhCHHHHHHHHHHHHHH----hcceeeecccCCC--CHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHH
Confidence 56777777777655554433322 2478998888765 8899999988774321 111 1111111233444
Q ss_pred H-HHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCC---hHHHHHHcCC--EEEEecCCCCCCCC
Q 014172 142 C-HKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS---YPEMARIADA--TPVILPTRISENFL 215 (429)
Q Consensus 142 a-~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~---~~~~~~~~g~--~~~~v~~~~~~~~~ 215 (429)
+ +++.+.+|. + ...++++|+++++..++.+++++||+|+++.|+|.+ +.......|. +++.++.++ +++.
T Consensus 83 a~~~~~~~~~~--~-~~~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~ 158 (425)
T 3ecd_A 83 AIERVKRLFNA--G-HANVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSR-DTML 158 (425)
T ss_dssp HHHHHHHHHTC--S-EEECCCSSHHHHHHHHHHHHCCTTCEEEEECC------------------CEEEEECCCT-TTSS
T ss_pred HHHHHHHHhCC--C-CceeecCchHHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCc-ccCc
Confidence 4 666666663 2 233458888999999999999999999999999988 3333334455 556666653 3477
Q ss_pred CCHHHHHhhcc-cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCc-ccccCCCCCCccccCCCCCCc
Q 014172 216 LDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE-HIIYAPATHTSFASLPGMWER 293 (429)
Q Consensus 216 ~d~e~l~~~l~-~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~-~~~~~~~~~~~~~~~~~~~~~ 293 (429)
+|++.|+++++ +++++|++++|+|| ...+ +++|.++|++| |++||+||+|. ++.+.+.....+ . ..
T Consensus 159 ~d~~~l~~~i~~~~~~~v~~~~~~~~--~~~~---l~~i~~l~~~~-~~~li~De~~~~g~~~~~~~~~~~-~-----~~ 226 (425)
T 3ecd_A 159 IDYDQVEALAQQHKPSLIIAGFSAYP--RKLD---FARFRAIADSV-GAKLMVDMAHIAGVIAAGRHANPV-E-----HA 226 (425)
T ss_dssp CCHHHHHHHHHHHCCSEEEEECSCCC--SCCC---HHHHHHHHHHH-TCEEEEECGGGHHHHHTTSSCCGG-G-----TC
T ss_pred cCHHHHHHHHhhcCCcEEEEccccCC--CcCC---HHHHHHHHHHc-CCEEEEECcChHhhhhcccccCch-h-----cC
Confidence 99999999997 58999999999996 4455 88999999999 99999999964 333443222111 1 12
Q ss_pred eEEEeccChhcccccceeeEEEcC-HHHHHHHHHHhhcccC-CCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHH
Q 014172 294 TLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQFTS-GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 371 (429)
Q Consensus 294 ~i~~~S~SK~~~~~G~R~G~v~~~-~~~~~~l~~~~~~~~~-~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l 371 (429)
.+++.||||.+ +|+|+||++++ +++.+.+......... +++...+.++..++... ..+++++++++++++++++
T Consensus 227 di~~~s~sK~l--~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~--~~~~~~~~~~~~~~~~~~l 302 (425)
T 3ecd_A 227 HVVTSTTHKTL--RGPRGGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEA--LTDDFKTYIDRVLANAQAL 302 (425)
T ss_dssp SEEEEESSGGG--CCCSCEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHH--TSHHHHHHHHHHHHHHHHH
T ss_pred cEEEecCCccc--CCCCcEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHHH--HHHhHHHHHHHHHHHHHHH
Confidence 38899999998 67899999998 5677777665433322 34444444444444321 2467788999999999999
Q ss_pred HHHhccCCCceeecC-CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 372 VKSFGELEGVKMSEP-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 372 ~~~L~~l~g~~~~~p-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+.|.+. |+++..+ .+++++|+.++.. + .+...+.+.| +++||.+
T Consensus 303 ~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~l-~~~gi~v 348 (425)
T 3ecd_A 303 GDVLKAG-GVDLVTGGTDNHLLLVDLRPK-G---------LKGAQVEQAL-ERAGITC 348 (425)
T ss_dssp HHHHHHT-TCEEGGGSCSSSEEEEECGGG-T---------CCHHHHHHHH-HHTTEEC
T ss_pred HHHHHhC-CCeeccCCCCceEEEEEeCCC-C---------CCHHHHHHHH-HHcCCEe
Confidence 9999986 8888754 4677788888642 0 2455666555 5569876
No 159
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.95 E-value=5.1e-27 Score=236.87 Aligned_cols=318 Identities=14% Similarity=0.086 Sum_probs=215.0
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.+||+..|. ..++. |+++.+++.+++.+..+ .+..+..+++.++++++.+.++. ..+ |++|+|+++++.
T Consensus 47 ~g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~--~~~~~~~~~~~~la~~l~~~~~~--~~~-v~~~~ggseA~~ 121 (452)
T 3n5m_A 47 QGKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLSY--FPMSQSHEPAIKLAEKLNEWLGG--EYV-IFFSNSGSEANE 121 (452)
T ss_dssp TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCCC--CCTTSEEHHHHHHHHHHHHHHTS--CEE-EEEESSHHHHHH
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcCC--cccccCCHHHHHHHHHHHHhCCC--Cce-EEEeCchHHHHH
Confidence 577899999884 34444 79999999999876432 33445678888888888887763 334 999999999999
Q ss_pred HHHHHhc-----C---CCCEEEEcCCCCCChHHHHHHcCCE-------------EEEecCCCCCCCCC-C---------H
Q 014172 170 QAVLAVC-----S---PGDEVIIPAPFWVSYPEMARIADAT-------------PVILPTRISENFLL-D---------P 218 (429)
Q Consensus 170 ~~l~~l~-----~---~gd~Vlv~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~~~-d---------~ 218 (429)
.+++.++ . ++|.|++.+|+|+++...+...+.. +..++....-.+.. | +
T Consensus 122 ~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (452)
T 3n5m_A 122 TAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECV 201 (452)
T ss_dssp HHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHH
Confidence 9999987 5 7899999999999887666555432 33333211000000 2 8
Q ss_pred HHHHhhcc----cCCcEEEEcCC-CCCccCCC-CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCC
Q 014172 219 KVLESKLT----EKSRLLILCSP-SNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 292 (429)
Q Consensus 219 e~l~~~l~----~~~~~i~l~~p-~NPtG~~~-~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~ 292 (429)
++|+++++ +++++|+++.+ +| ||.++ +++++++|.++|++| |+++|+||+|.+|.+.|.. ...... +
T Consensus 202 ~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~-~~llI~DEv~~g~g~~g~~-~~~~~~----~ 274 (452)
T 3n5m_A 202 KEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKH-GALLISDEVICGFGRTGKA-FGFMNY----D 274 (452)
T ss_dssp HHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSS-SGGGGT----T
T ss_pred HHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHc-CCEEEEecchhCCCccccc-chhhhc----C
Confidence 99999887 56677777777 89 99766 888899999999999 9999999999987655432 111111 1
Q ss_pred ceEEEeccChhccccc-ceeeEEEcCHHHHHHHHH---H---hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 014172 293 RTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNK---I---QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFR 365 (429)
Q Consensus 293 ~~i~~~S~SK~~~~~G-~R~G~v~~~~~~~~~l~~---~---~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~ 365 (429)
....+.+|||.++. | +|+||+++++++++.+.. . ....+++.+.+++.++.++|+... .++.+++.++..+
T Consensus 275 ~~~di~t~sK~l~~-G~~~ig~~~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~-~~~~~~~~~~~~~ 352 (452)
T 3n5m_A 275 VKPDIITMAKGITS-AYLPLSATAVKREIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIE-NENLIERSAQMGS 352 (452)
T ss_dssp CCCSEEEECGGGGT-TSSCCEEEEEEHHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHH-HTTHHHHHHHHHH
T ss_pred CCCCEEeecccccC-CCcceEEEEECHHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHH-hccHHHHHHHHHH
Confidence 12224579999994 9 999999999999888743 1 133556789999999999887411 0233444444445
Q ss_pred HHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 366 ERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 366 ~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
..++.+.+.+.+++++...++.|.| +++.+...... ...+. .....++++.|+++ ||.+
T Consensus 353 ~l~~~L~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~-~~~~~-~~~~~~~~~~l~~~-Gv~~ 411 (452)
T 3n5m_A 353 LLLEQLKEEIGEHPLVGDIRGKGLL-VGIELVNDKET-KEPID-NDKIASVVNACKEK-GLII 411 (452)
T ss_dssp HHHHHHHHHHTTCTTEEEEEESSSC-EEEEEEEETTT-TEECC-HHHHHHHHHHHHHT-TEEC
T ss_pred HHHHHHHHHHhcCCCeEEEEEEEEE-EEEEEecCCcc-cCCCC-HHHHHHHHHHHHHC-CcEE
Confidence 5555555555556666666677766 55655321000 00000 00135788888876 8875
No 160
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.95 E-value=4.2e-27 Score=236.71 Aligned_cols=297 Identities=13% Similarity=0.087 Sum_probs=211.6
Q ss_pred cCCCeEEcCCCCC--CCC-ChHHHHHHHHHHHHcCCCCCC---CCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHH
Q 014172 93 AGVSVIRLAAGEP--DFD-TPVLIAEAGINAIREGFTRYT---PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (429)
Q Consensus 93 ~g~~~i~L~~g~~--~~~-~p~~v~~a~~~~~~~~~~~Y~---~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~ 166 (429)
.|+.+||+..|.+ .++ .|+++.+++.+.+.+.. .++ +.....++++.++++ +| .++|++++|+++
T Consensus 74 ~g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~-~~~~~~~~~~~~~l~~~la~~----~g----~~~v~~~~sGse 144 (439)
T 2oat_A 74 EGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLT-LTSRAFYNNVLGEYEEYITKL----FN----YHKVLPMNTGVE 144 (439)
T ss_dssp TCCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCS-CCCTTSEESSHHHHHHHHHHH----HT----CSEEEEESSHHH
T ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHHhcC-cccCccCCHHHHHHHHHHHHh----cC----CCEEEEeCCHHH
Confidence 4678999999875 455 68999999999886532 221 222334555555554 34 478999999999
Q ss_pred HHHHHHHHhc---------CCC-CEEEEcCCCCCChH-HHHHHcC------------CEEEEecCCCCCCCCCCHHHHHh
Q 014172 167 SILQAVLAVC---------SPG-DEVIIPAPFWVSYP-EMARIAD------------ATPVILPTRISENFLLDPKVLES 223 (429)
Q Consensus 167 al~~~l~~l~---------~~g-d~Vlv~~p~y~~~~-~~~~~~g------------~~~~~v~~~~~~~~~~d~e~l~~ 223 (429)
++..++++++ .+| |.|++.+|+|+++. ..+...| ..++.+|. .|++.|++
T Consensus 145 A~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le~ 217 (439)
T 2oat_A 145 AGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPALER 217 (439)
T ss_dssp HHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-------SCHHHHHH
T ss_pred HHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-------CCHHHHHH
Confidence 9999998875 467 89999999998764 4444444 45666664 28999999
Q ss_pred hcc-cCCcEEEEcCCCCCccC-CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccC
Q 014172 224 KLT-EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFS 301 (429)
Q Consensus 224 ~l~-~~~~~i~l~~p~NPtG~-~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 301 (429)
+++ +++++|+++..+|++|. +++.+.+++|.++|++| |+++|+||+|.++.+.|.. ..+.... .... +.|||
T Consensus 218 ~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~-gillI~DEv~~g~g~~g~~-~~~~~~~-~~~D---i~t~s 291 (439)
T 2oat_A 218 ALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRH-QVLFIADEIQTGLARTGRW-LAVDYEN-VRPD---IVLLG 291 (439)
T ss_dssp HTTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSS-SGGGGGT-CCCS---EEEEC
T ss_pred HhCCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCccCCcc-hhHHHhC-CCCc---EEEec
Confidence 994 56666666555678996 56888999999999999 9999999999876554421 1111111 1111 23899
Q ss_pred hhccccc-ceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCC
Q 014172 302 KAFAMTG-WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG 380 (429)
Q Consensus 302 K~~~~~G-~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g 380 (429)
|.++ +| +|+||+++++++++.+.......+++.+.+++.++.++|+. .++ +++.++++++++++.+.|+++ +
T Consensus 292 K~l~-~G~~~~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~---~~~--~~~~~~~~~~~~~l~~~L~~l-~ 364 (439)
T 2oat_A 292 KALS-GGLYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEV---LEE--ENLAENADKLGIILRNELMKL-P 364 (439)
T ss_dssp GGGG-TTSSCCEEEEECHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHH---HHH--TTHHHHHHHHHHHHHHHHTTS-C
T ss_pred cccc-CCCCCeEEEEECHHHHhccCCCCcccCCCcCHHHHHHHHHHHHH---Hhh--hhHHHHHHHHHHHHHHHHHHh-c
Confidence 9999 78 99999999999887765543445667788999988888875 222 256778888999999999887 4
Q ss_pred cee---ecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 381 VKM---SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 381 ~~~---~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
+.+ .++. |.|+|+.++...+ .+..+++++|+++ ||.+.
T Consensus 365 ~~~~~~~~~~-g~~~~v~l~~~~~---------~~~~~l~~~l~~~-Gv~v~ 405 (439)
T 2oat_A 365 SDVVTAVRGK-GLLNAIVIKETKD---------WDAWKVCLRLRDN-GLLAK 405 (439)
T ss_dssp TTTEEEEEEE-TTEEEEEECCCSS---------CCHHHHHHHHHHT-TEECC
T ss_pred CCCcEEEEee-eeEEEEEEecCcc---------HHHHHHHHHHHHC-CeEEe
Confidence 332 3344 4557888864200 1477999999876 99863
No 161
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.95 E-value=3.2e-27 Score=237.09 Aligned_cols=299 Identities=14% Similarity=0.096 Sum_probs=203.6
Q ss_pred cCCCeEEcCCCC--CCCC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.+||+..|. .+++ .++.+.+++.+.+.+.. .|+. ....+++..+++.+.+.+| .++|++|+|+++++.
T Consensus 63 ~G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~-~~~~-~~~~~~~~~l~~~la~~~g----~~~v~~~~sGseA~~ 136 (433)
T 1z7d_A 63 NDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLT-ICSR-AFFSVPLGICERYLTNLLG----YDKVLMMNTGAEANE 136 (433)
T ss_dssp TCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCS-CCCT-TSEEHHHHHHHHHHHHHHT----CSEEEEESSHHHHHH
T ss_pred CCCEEEEcccchhhcccCCCCHHHHHHHHHHHHhCC-CccC-CcCCHHHHHHHHHHHhhcC----CCeEEEeCCHHHHHH
Confidence 467899999875 4666 68999999999886532 2221 1234556666666665555 479999999999999
Q ss_pred HHHHHhc---------CCC-CEEEEcCCCCCChHH-HHHHcC------------CEEEEecCCCCCCCCCCHHHHHhhc-
Q 014172 170 QAVLAVC---------SPG-DEVIIPAPFWVSYPE-MARIAD------------ATPVILPTRISENFLLDPKVLESKL- 225 (429)
Q Consensus 170 ~~l~~l~---------~~g-d~Vlv~~p~y~~~~~-~~~~~g------------~~~~~v~~~~~~~~~~d~e~l~~~l- 225 (429)
.+++++. .+| |.|++.+|+|.++.. .+...| ..++.+|. .|++.|++++
T Consensus 137 ~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le~~l~ 209 (433)
T 1z7d_A 137 TAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-------DDLEALEEELK 209 (433)
T ss_dssp HHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-------TCHHHHHHHHT
T ss_pred HHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-------CCHHHHHHHhC
Confidence 9988753 478 999999999987654 333333 24445543 2899999999
Q ss_pred ccCCcEEEEcCCCCCccCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhc
Q 014172 226 TEKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF 304 (429)
Q Consensus 226 ~~~~~~i~l~~p~NPtG~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 304 (429)
++++++|+++..+|+||.+ ++.+.+++|.++|++| |+++|+||+|.++.+.+.. ..+.... .... +.||||.+
T Consensus 210 ~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~-g~llI~DEv~~g~g~~g~~-~~~~~~~-~~~d---i~t~sK~l 283 (433)
T 1z7d_A 210 DPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKY-NVLFVADEVQTGLGRTGKL-LCVHHYN-VKPD---VILLGKAL 283 (433)
T ss_dssp STTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSS-SGGGGGT-CCCS---EEEECGGG
T ss_pred CCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHc-CCEEEEecCccCCCcCCcc-hhhHhcC-CCCC---EEEECccc
Confidence 5677776666556789975 6888999999999999 9999999999876544421 1111111 1111 33899999
Q ss_pred cccc-ceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC----C
Q 014172 305 AMTG-WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL----E 379 (429)
Q Consensus 305 ~~~G-~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l----~ 379 (429)
+ +| +|+||+++++++++.+.......+++.+.+++.++.++|+. .++ +++.++++++++++.+.|+++ +
T Consensus 284 ~-~G~~~~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~---~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~ 357 (433)
T 1z7d_A 284 S-GGHYPISAVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNV---LIN--EKLCENAEKLGGPFLENLKRELKDSK 357 (433)
T ss_dssp G-TTSSCCEEEEECHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHH---HHH--TTHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred c-CCCCCeEEEEECHHHHhhhccccccccCCCCHHHHHHHHHHHHH---HHh--ccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9 89 99999999999887765543445667788999888888874 121 245666777778887777654 3
Q ss_pred CceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 380 GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 380 g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+...++.| .|+|+.++... .+..+++++|+++ ||.+
T Consensus 358 ~~~~~~~~g-~~~~i~~~~~~----------~~~~~~~~~l~~~-Gv~v 394 (433)
T 1z7d_A 358 IVRDVRGKG-LLCAIEFKNEL----------VNVLDICLKLKEN-GLIT 394 (433)
T ss_dssp TEEEEEEET-TEEEEEECTTT----------CCHHHHHHHHHHT-TEEC
T ss_pred CeEEEEeee-eEEEEEEccCh----------hHHHHHHHHHHHC-CeEE
Confidence 333334444 55888886410 1578899999876 9986
No 162
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.95 E-value=3.4e-27 Score=239.63 Aligned_cols=313 Identities=16% Similarity=0.132 Sum_probs=227.8
Q ss_pred HHHHHHHHHHhcCC----CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCC---CCCCHHHHHHHHHHHHhhcCCCCC
Q 014172 82 AITDQATALAQAGV----SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTP---NAGTLELRSAICHKLKEENGLSYT 154 (429)
Q Consensus 82 ~~~~~~~~~~~~g~----~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~---~~G~~~lr~~ia~~l~~~~g~~~~ 154 (429)
++.+...++...+. .++.|+ +... ...+.+.+++.+.+ ...+.|.+ .+|..++++++++++.+.+|.+.
T Consensus 49 ~~~~~~~~l~~~~~~~~~~~~~lg-~~~~-~~~p~v~~~~~~~~-~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~- 124 (474)
T 1wyu_B 49 TLVRHYTGLSRRQVGVDTTFYPLG-SCTM-KYNPKLHEEAARLF-ADLHPYQDPRTAQGALRLMWELGEYLKALTGMDA- 124 (474)
T ss_dssp HHHHHHHHHHTTCCCTTTSCCCBT-TTCC-CCCCHHHHHHHHTT-SSCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE-
T ss_pred HHHHHHHHHHhCCCCcccCccccc-cccc-cCCHHHHHHHHHHH-HhcCCCCchhhChHHHHHHHHHHHHHHHHHCCCc-
Confidence 45555666665543 367787 5433 22345566555542 22334443 56778999999999999888542
Q ss_pred CCcEEEecChHHHHHHHHHHh----cCCCC-----EEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhc
Q 014172 155 PDQILVSNGAKQSILQAVLAV----CSPGD-----EVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL 225 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l----~~~gd-----~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l 225 (429)
.+++++|+++++..++.++ .++|| +|+++.|+|+.+...++..|++++.++++. ++.+|+++|++++
T Consensus 125 --~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~--~~~~d~~~L~~~i 200 (474)
T 1wyu_B 125 --ITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGP--EGEVDLEALKREL 200 (474)
T ss_dssp --EECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCT--TSSBCHHHHHHHC
T ss_pred --eeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCCC--CCCcCHHHHHHhh
Confidence 4678899999998766554 35887 999999999999999999999999999863 4679999999999
Q ss_pred ccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcc
Q 014172 226 TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 305 (429)
Q Consensus 226 ~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 305 (429)
++++++|++++| ||||.+. +++++|+++|++| |+++|+|++|..+.++. ..... .+.++++.|+||.|+
T Consensus 201 ~~~t~~v~~~~p-n~~G~~~--~~l~~i~~l~~~~-g~~li~Dea~~~~~~g~---~~~~~----~g~di~~~s~~K~~~ 269 (474)
T 1wyu_B 201 GPHVAALMLTNP-NTLGLFE--RRILEISRLCKEA-GVQLYYDGANLNAIMGW---ARPGD----MGFDVVHLNLHKTFT 269 (474)
T ss_dssp STTEEEEEECSS-CTTSCCC--TTHHHHHHHHHHH-TCEEEEEGGGGGGTTTT---CCHHH----HTCSEEECCTTTTTC
T ss_pred CCCceEEEEECC-CCCcccC--CCHHHHHHHHHHc-CCEEEEeCchhhhhccC---CCccc----CCCcEEEEeCccccc
Confidence 989999999998 6899983 2399999999999 99999999998765421 11111 245689999999998
Q ss_pred cc-c---ceeeEEEcCHHHHHHHHH-Hh------------------hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHH
Q 014172 306 MT-G---WRLGYIAGPKHFVAACNK-IQ------------------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 362 (429)
Q Consensus 306 ~~-G---~R~G~v~~~~~~~~~l~~-~~------------------~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~ 362 (429)
++ | +|+||+++++++++.+.. .. .....+.+.+++.++..++... ..+++++..+
T Consensus 270 ~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~--g~~~l~~~~~ 347 (474)
T 1wyu_B 270 VPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTL--GLEGLKKAAA 347 (474)
T ss_dssp CCCTTSCCCCCCEEECGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred cCCCCCCCCeEEEEEcHHHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 76 5 599999999988766541 00 0012235667777777777631 2567888899
Q ss_pred HHHHHHHHHHHHhccCCCceeecCCceEE-EEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 363 AFRERRDFLVKSFGELEGVKMSEPQGAFY-LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 363 ~~~~~r~~l~~~L~~l~g~~~~~p~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+.++++++.+.|+++ |+++..+...+. .|++++.. .+..+++++|+++ ||.+
T Consensus 348 ~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-----------~~~~~l~~~L~~~-Gi~~ 401 (474)
T 1wyu_B 348 LAVLNARYLKELLKEK-GYRVPYDGPSMHEFVAQPPEG-----------FRALDLAKGLLEL-GFHP 401 (474)
T ss_dssp HHHHHHHHHHHHHHHT-TCBCSSCSSCCSCEEEBCSTT-----------CCHHHHHHHHHHT-TCCC
T ss_pred HHHHHHHHHHHHHhhc-CcEecCCCCcceEEEEEcCCC-----------CCHHHHHHHHHHC-Cccc
Confidence 9999999999999988 887743332221 45666321 3688999999877 8864
No 163
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.95 E-value=9.9e-27 Score=231.95 Aligned_cols=233 Identities=14% Similarity=0.184 Sum_probs=180.7
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHH----cCCEEEEecCCC
Q 014172 135 LELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI----ADATPVILPTRI 210 (429)
Q Consensus 135 ~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~v~~~~ 210 (429)
...++++++++.+.+| .+++++++|+++++..++++++++||+|++++|+|.++...++. .|++++.++.+
T Consensus 80 ~p~~~~l~~~la~~~g----~~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~- 154 (414)
T 3ndn_A 80 NPTVSVFEERLRLIEG----APAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD- 154 (414)
T ss_dssp CHHHHHHHHHHHHHHT----CSEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-
T ss_pred ChHHHHHHHHHHHHHC----CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC-
Confidence 3455566666655555 25789999999999999999999999999999999998776644 99999999863
Q ss_pred CCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCC
Q 014172 211 SENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM 290 (429)
Q Consensus 211 ~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~ 290 (429)
|++.|++++++++++|++++|+||||.+.+ +++|.++|++| |+++|+|++|....+.. ++ .
T Consensus 155 ------d~~~l~~ai~~~t~~v~le~p~NptG~~~~---l~~i~~la~~~-g~~livDe~~~~~~~~~----~~-----~ 215 (414)
T 3ndn_A 155 ------DLSQWERALSVPTQAVFFETPSNPMQSLVD---IAAVTELAHAA-GAKVVLDNVFATPLLQQ----GF-----P 215 (414)
T ss_dssp ------CHHHHHHHTSSCCSEEEEESSCTTTCCCCC---HHHHHHHHHHT-TCEEEEECTTTHHHHCC----CG-----G
T ss_pred ------CHHHHHHhcCCCCeEEEEECCCCCCCcccc---HHHHHHHHHHc-CCEEEEECCCcccccCC----ch-----h
Confidence 899999999999999999999999999998 89999999999 99999999998532211 11 1
Q ss_pred CCceEEEeccChhccccc-ceeeEEEcCHHHHH-HHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Q 014172 291 WERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVA-ACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERR 368 (429)
Q Consensus 291 ~~~~i~~~S~SK~~~~~G-~R~G~v~~~~~~~~-~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r 368 (429)
.+.++++.|+||.++.+| +++||++++++.+. .+.........+.+.....++...+ +++....++..+++
T Consensus 216 ~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l-------~~l~~r~~~~~~~a 288 (414)
T 3ndn_A 216 LGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPAMSAFNAWVLLKGL-------ETLAIRVQHSNASA 288 (414)
T ss_dssp GTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCCCCHHHHHHHHHHG-------GGHHHHHHHHHHHH
T ss_pred cCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH-------HHHHHHHHHHHHHH
Confidence 345699999999999778 89999999988776 6665555555555655544444333 34556667778888
Q ss_pred HHHHHHhccCCCceee-cCC----------------ceEEEEEecCC
Q 014172 369 DFLVKSFGELEGVKMS-EPQ----------------GAFYLFIDFST 398 (429)
Q Consensus 369 ~~l~~~L~~l~g~~~~-~p~----------------~~~~~~~~l~~ 398 (429)
+.+.+.|++.|++..+ .|. .|..+++.+++
T Consensus 289 ~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~ 335 (414)
T 3ndn_A 289 QRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDC 335 (414)
T ss_dssp HHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECS
T ss_pred HHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcC
Confidence 8999999888776533 232 35568898863
No 164
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.95 E-value=3e-27 Score=235.46 Aligned_cols=299 Identities=15% Similarity=0.063 Sum_probs=198.4
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCC-------CCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGF-------TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~-------~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
+.+.+..+.+. .|+.+.+++.+.+.+.. ..|+.......+++...+++.+.+|. ++++|++++| ++++
T Consensus 31 ~~~~~~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~--~~~~v~~~sG-s~a~ 105 (420)
T 3gbx_A 31 EHIELIASENY--TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGA--DYANVQPHSG-SQAN 105 (420)
T ss_dssp HSEECCTTCCC--CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTC--SEEECCCSSH-HHHH
T ss_pred cceeeeccCCC--CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCC--CCceeEecCc-HHHH
Confidence 35777666654 58899999988774422 12222233345555555777777774 5566666666 7899
Q ss_pred HHHHHHhcCCCCEEEEcCCCCCChH---HHHHHc--CCEEEEecCCCCCCCCCCHHHHHhhccc-CCcEEEEcCCCCCcc
Q 014172 169 LQAVLAVCSPGDEVIIPAPFWVSYP---EMARIA--DATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTG 242 (429)
Q Consensus 169 ~~~l~~l~~~gd~Vlv~~p~y~~~~---~~~~~~--g~~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~p~NPtG 242 (429)
..++.+++++||+|+++.|+|..+. ...... +...+.++.+ .++.+|++.|++++++ ++++|++++|+||+
T Consensus 106 ~~a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~- 182 (420)
T 3gbx_A 106 FAVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGID--ESGKIDYDEMAKLAKEHKPKMIIGGFSAYSG- 182 (420)
T ss_dssp HHHHHHHCCTTCEEEEEEEC------------CHHHHSEEEEEEEC--TTCSCCHHHHHHHHHHHCCSEEEECCTTCCS-
T ss_pred HHHHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCC--ccCCcCHHHHHHHHHhcCCeEEEEecCccCC-
Confidence 9999999999999999999998743 222223 3455555554 4567899999999976 69999999999974
Q ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCH---H
Q 014172 243 SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK---H 319 (429)
Q Consensus 243 ~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~---~ 319 (429)
..+ +++|.++|++| |+++|+||+|....+......... ...++++.||||.++ |.+.||+++++ +
T Consensus 183 -~~~---l~~l~~l~~~~-~~~li~De~~~~~~~~~~~~~~~~-----~~~di~~~s~sK~~~--g~~gg~~~~~~~~~~ 250 (420)
T 3gbx_A 183 -VVD---WAKMREIADSI-GAYLFVDMAHVAGLIAAGVYPNPV-----PHAHVVTTTTHKTLA--GPRGGLILAKGGDEE 250 (420)
T ss_dssp -CCC---HHHHHHHHHHT-TCEEEEECTTTHHHHHTTSSCCST-----TTSSEEEEESSGGGC--SCSCEEEEESSCCHH
T ss_pred -ccC---HHHHHHHHHHc-CCEEEEECCcchhceecccCCccc-----ccCCEEEeecccCCC--CCCceEEEEcCCcHH
Confidence 666 89999999999 999999999864333221211111 124589999999984 55669999987 7
Q ss_pred HHHHHHHHhhcccC-CCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC-CceEEEEEecC
Q 014172 320 FVAACNKIQSQFTS-GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP-QGAFYLFIDFS 397 (429)
Q Consensus 320 ~~~~l~~~~~~~~~-~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p-~~~~~~~~~l~ 397 (429)
+.+.+......... +++...+.++..++... .++++++++++++++++++.+.|.+. |+++..+ ..++++|+.++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~ 327 (420)
T 3gbx_A 251 LYKKLNSAVFPSAQGGPLMHVIAGKAVALKEA--MEPEFKVYQQQVAKNAKAMVEVFLNR-GYKVVSGGTENHLFLLDLV 327 (420)
T ss_dssp HHHHHHHHHC----CCCCHHHHHHHHHHHHHT--TSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECG
T ss_pred HHHHhhhhcCCCCCCCcchhHHHHHHHHHHHH--HhHhHHHHHHHHHHHHHHHHHHHHhc-CCeeccCCCCCeEEEEEcC
Confidence 77777665433322 34444444544455431 24677889999999999999999985 8887653 56677888886
Q ss_pred CccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 398 TYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.. + .+...+.+.| +++||.+
T Consensus 328 ~~-~---------~~~~~~~~~l-~~~gi~v 347 (420)
T 3gbx_A 328 DK-N---------LTGKEADAAL-GRANITV 347 (420)
T ss_dssp GG-T---------CCHHHHHHHH-HHTTEEC
T ss_pred CC-C---------CCHHHHHHHH-HHCCcEe
Confidence 42 0 2455555555 5669976
No 165
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.95 E-value=1.1e-27 Score=240.34 Aligned_cols=314 Identities=16% Similarity=0.127 Sum_probs=197.8
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.++|+..|. +.++. ||++.+++.+++.+....+.+.....+|+++++++ ++ .+++|++|+|+++++.
T Consensus 53 ~g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~----~~---~~~~v~~~~sGsea~~ 125 (434)
T 3l44_A 53 DGNKYIDYLAAYGPIITGHAHPHITKAITTAAENGVLYGTPTALEVKFAKMLKEA----MP---ALDKVRFVNSGTEAVM 125 (434)
T ss_dssp TCCEEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHH----CT---TCSEEEEESSHHHHHH
T ss_pred CCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcCCCCCCHHHHHHHHHHHHh----CC---CCCEEEEeCchHHHHH
Confidence 577899999886 44554 89999999998876433223444444555555554 33 5689999999999999
Q ss_pred HHHHHhcC--CCCEEEEcCCCCCChHHHHHHcCCE-EEEecCCCCCCCC------------CCHHHHHhhcc---cCCcE
Q 014172 170 QAVLAVCS--PGDEVIIPAPFWVSYPEMARIADAT-PVILPTRISENFL------------LDPKVLESKLT---EKSRL 231 (429)
Q Consensus 170 ~~l~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~-~~~v~~~~~~~~~------------~d~e~l~~~l~---~~~~~ 231 (429)
.+++.+.. +++.|++.+|+|+++...+...+.. ...+......+.. -|++.|+++++ +++++
T Consensus 126 ~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~ 205 (434)
T 3l44_A 126 TTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHEVAA 205 (434)
T ss_dssp HHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEE
T ss_pred HHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCCEEE
Confidence 99988765 6799999999998876544433322 1111110001000 18999999886 34555
Q ss_pred EEEcCCCCCccCCC-CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccce
Q 014172 232 LILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWR 310 (429)
Q Consensus 232 i~l~~p~NPtG~~~-~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R 310 (429)
|+++.++|++|.+. +++++++|.++|++| |+++|+||+|.+| +.+.. .....+.. ...+.||||.++ +|+|
T Consensus 206 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~-~illI~DEv~~g~-~~g~~-~~~~~~~~----~~di~t~sK~~~-~G~~ 277 (434)
T 3l44_A 206 ILVEPIVGNFGIVEPKPGFLEKVNELVHEA-GALVIYDEVITAF-RFMYG-GAQDLLGV----TPDLTALGKVIG-GGLP 277 (434)
T ss_dssp EEECSSBCTTSCBCCCTTHHHHHHHHHHTT-TCEEEEECTTTTT-TSSSS-CHHHHHTC----CCSEEEEEGGGG-TTSS
T ss_pred EEEcCCCCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccce-ecccc-HHHHHcCC----CCCeeehhhhhc-CCcC
Confidence 55555566667655 888999999999999 9999999999987 44421 11111111 111568999999 8999
Q ss_pred eeEEEcCHHHHHHHHHH---hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc----CCCcee
Q 014172 311 LGYIAGPKHFVAACNKI---QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE----LEGVKM 383 (429)
Q Consensus 311 ~G~v~~~~~~~~~l~~~---~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----l~g~~~ 383 (429)
+||+++++++++.+... ....+++.+.+++.++.++|+.... ++ +.++++++++++.+.|++ ++.+..
T Consensus 278 iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~-~~----~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 352 (434)
T 3l44_A 278 IGAYGGKKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQ-EG----LYEKLDELGATLEKGILEQAAKHNIDIT 352 (434)
T ss_dssp CEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS-TT----HHHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred eeeEEEcHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHc-cc----HHHHHHHHHHHHHHHHHHHHHhCCCCEE
Confidence 99999999998877652 2334567899999999998874211 23 334444444444444443 433344
Q ss_pred ecCCceEEEEEecCCccCCcccC--CCCCCChHHHHHHHHHhCCeec
Q 014172 384 SEPQGAFYLFIDFSTYYGSEAEG--FGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 384 ~~p~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.++.|.| +++.+.......... ........++++.|+++ ||.+
T Consensus 353 ~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v 397 (434)
T 3l44_A 353 LNRLKGA-LTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQE-GVNL 397 (434)
T ss_dssp EEEETTE-EEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHT-TEEC
T ss_pred EEeeccE-EEEEEecCcccchhhccccCHHHHHHHHHHHHHC-CeEE
Confidence 4455555 666653210000000 00001236788888876 8876
No 166
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.95 E-value=3e-28 Score=238.41 Aligned_cols=288 Identities=11% Similarity=0.100 Sum_probs=208.2
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcC---------CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCC-c-EEEecCh
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREG---------FTRYTPNAGTLELRSAICHKLKEENGLSYTPD-Q-ILVSNGA 164 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~---------~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~-~-i~~t~G~ 164 (429)
.++.+..|. .++|+.+++++.+.+.+. ..+|+ .+..++++++.+++.+.+|. +++ + +++|+|+
T Consensus 4 ~~~l~~~~~--~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~la~~~g~--~~~~~~i~~t~g~ 77 (362)
T 2c0r_A 4 RAYNFNAGP--AALPLEVLERAQAEFVDYQHTGMSIMEMSHRG--AVYEAVHNEAQARLLALLGN--PTGYKVLFIQGGA 77 (362)
T ss_dssp CCEECCSSS--CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTS--HHHHHHHHHHHHHHHHHTTC--CSSEEEEEESSHH
T ss_pred ceeeccCCC--CCCCHHHHHHHHHHHhhhhhcCccccccCCCc--HHHHHHHHHHHHHHHHHhCC--CCCcEEEEECCCc
Confidence 356777773 567899999999876431 11121 23456788899999888885 443 5 5788999
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCCCh--HHHHHHcCCEEEEecCCCC--CCCCCCHHHHHhhcccCCcEEEEcCCCCC
Q 014172 165 KQSILQAVLAVCSPGDEVIIPAPFWVSY--PEMARIADATPVILPTRIS--ENFLLDPKVLESKLTEKSRLLILCSPSNP 240 (429)
Q Consensus 165 ~~al~~~l~~l~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~v~~~~~--~~~~~d~e~l~~~l~~~~~~i~l~~p~NP 240 (429)
++++..++.+++++||+|++..+.+.+. ...++..| +++.++++.+ .+..+|.++++ +++++|+|++++|+||
T Consensus 78 t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~~t~~v~~~~~~n~ 154 (362)
T 2c0r_A 78 STQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQDNAAYLHLTSNETI 154 (362)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCTTEEEEEEESEETT
T ss_pred hHHHHHHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cCCCcCEEEEeCCcCc
Confidence 9999999999999999999887664442 36677889 9999998642 23335666654 6788999999999999
Q ss_pred ccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHH
Q 014172 241 TGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF 320 (429)
Q Consensus 241 tG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~ 320 (429)
||.+++ ++++| | |+++|+|++|..+. .+..+. +..+++.|+||.+|++| +||+++++++
T Consensus 155 tG~~~~--~l~~i------~-~~~vivD~a~~~~~----~~~~~~------~~d~~~~s~~K~~g~~G--~G~l~~~~~~ 213 (362)
T 2c0r_A 155 EGAQFK--AFPDT------G-SVPLIGDMSSDILS----RPFDLN------QFGLVYAGAQKNLGPSG--VTVVIVREDL 213 (362)
T ss_dssp TTEECS--SCCCC------T-TSCEEEECTTTTTS----SCCCGG------GCSEEEEETTTTTCCSS--CEEEEEEGGG
T ss_pred cceecc--ccccc------C-CCEEEEEChhhccC----Cccchh------HCcEEEEeccccccCcC--cEEEEEcHHH
Confidence 999744 25555 7 89999999998642 122222 12488889999999888 9999999887
Q ss_pred HHHHHHH------------hhcccCCCchHHHHHHHHHHhcCCCChH--HHHHHHHHHHHHHHHHHHHhccCCCc-eeec
Q 014172 321 VAACNKI------------QSQFTSGASSISQKAGVAALGLGYAGGE--VVSKMVKAFRERRDFLVKSFGELEGV-KMSE 385 (429)
Q Consensus 321 ~~~l~~~------------~~~~~~~~~~~~q~aa~~~l~~~~~~~~--~~~~~~~~~~~~r~~l~~~L~~l~g~-~~~~ 385 (429)
++.+... ......+++.+.|.++.++|+. ..+ ++++++++++++++++.+.|++++++ ++..
T Consensus 214 ~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 290 (362)
T 2c0r_A 214 VAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKW---IEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCV 290 (362)
T ss_dssp SSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHH---HHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESS
T ss_pred HhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHH---HHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCC
Confidence 6555321 1123346788888888888875 233 57889999999999999999998436 6642
Q ss_pred ---CCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 386 ---PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 386 ---p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
..++.++++.++.. .+..+++++|.++ ||.+
T Consensus 291 ~~~~~~~~~~~~~~~~~-----------~~~~~~~~~L~~~-gi~~ 324 (362)
T 2c0r_A 291 DVDSRSDMNITFRLASE-----------ELEKEFVKASEQE-GFVG 324 (362)
T ss_dssp CGGGBCSSEEEEECSCH-----------HHHHHHHHHHHHT-TEES
T ss_pred ChHHcCCcEEEEEcCCc-----------chHHHHHHHHHHC-CCee
Confidence 12345578888642 1577899887655 8865
No 167
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.95 E-value=8.8e-27 Score=228.58 Aligned_cols=273 Identities=16% Similarity=0.138 Sum_probs=204.8
Q ss_pred ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh---cCCCCEEEEc
Q 014172 109 TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV---CSPGDEVIIP 185 (429)
Q Consensus 109 ~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l---~~~gd~Vlv~ 185 (429)
+|+.+.+++.+.+.++ .|++..+..+++++++++++ . +++++|+|+++++..++.++ +++||+|+++
T Consensus 11 ~~~~v~~a~~~~~~~~--~~~~~~~~~~l~~~la~~~~------~--~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~ 80 (375)
T 2fnu_A 11 LDKEDKKAVLEVLNSK--QLTQGKRSLLFEEALCEFLG------V--KHALVFNSATSALLTLYRNFSEFSADRNEIITT 80 (375)
T ss_dssp CCHHHHHHHHHHHTSS--CCSSSHHHHHHHHHHHHHHT------C--SEEEEESCHHHHHHHHHHHSSCCCTTSCEEEEC
T ss_pred CCHHHHHHHHHHHHcC--cccCChHHHHHHHHHHHHhC------C--CeEEEeCCHHHHHHHHHHHhcccCCCCCEEEEC
Confidence 5788999999988653 34455567889999998873 1 28999999999999999999 8999999999
Q ss_pred CCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEE
Q 014172 186 APFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLV 265 (429)
Q Consensus 186 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~v 265 (429)
.|+|.++...++..|++++.+++++++ .+|++++++.+++++++|++++| ||.+.+ +++|.++|++| |+++
T Consensus 81 ~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~---l~~i~~l~~~~-~~~l 151 (375)
T 2fnu_A 81 PISFVATANMLLESGYTPVFAGIKNDG--NIDELALEKLINERTKAIVSVDY---AGKSVE---VESVQKLCKKH-SLSF 151 (375)
T ss_dssp SSSCTHHHHHHHHTTCEEEECCBCTTS--SBCGGGSGGGCCTTEEEEEEECG---GGCCCC---HHHHHHHHHHH-TCEE
T ss_pred CCccHhHHHHHHHCCCEEEEeccCCCC--CCCHHHHHhhcCcCceEEEEeCC---cCCccC---HHHHHHHHHHc-CCEE
Confidence 999999999999999999999986533 68999999999888998887776 999999 89999999999 9999
Q ss_pred EEccCCcccccCCCCCCccccCCCCCCceEEEeccC--hhcccccceeeEEEc-C-HHHHHHHHHHhhccc---------
Q 014172 266 LSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFS--KAFAMTGWRLGYIAG-P-KHFVAACNKIQSQFT--------- 332 (429)
Q Consensus 266 i~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~~~~G~R~G~v~~-~-~~~~~~l~~~~~~~~--------- 332 (429)
|+|++|..+..... ..+.. .+ .+.+.||| |.++. | +|++++ + +++++.+........
T Consensus 152 i~D~a~~~~~~~~~-----~~~~~-~~-~i~~~s~s~~K~~~~-g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (375)
T 2fnu_A 152 LSDSSHALGSEYQN-----KKVGG-FA-LASVFSFHAIKPITT-A--EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGE 221 (375)
T ss_dssp EEECTTCTTCEETT-----EETTS-SS-SEEEEECCTTSSSCC-S--SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEE
T ss_pred EEECccccCCeECC-----eeccc-cC-CeEEEeCCCCCCccc-c--CceEEEeCCHHHHHHHHHHHhcCCccccccccc
Confidence 99999986542211 11111 12 37888888 99974 6 788876 4 678887776542111
Q ss_pred -------CCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC----Cc-eEEEEEecCCcc
Q 014172 333 -------SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP----QG-AFYLFIDFSTYY 400 (429)
Q Consensus 333 -------~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p----~~-~~~~~~~l~~~~ 400 (429)
...+.+...++.. . .+++++..++++++++++.+.|++++|+++..+ .+ ++++|+.++..
T Consensus 222 ~~~~~~~~~~~~~~~a~~~~--~-----~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 293 (375)
T 2fnu_A 222 VKSIGHNFRLNEIQSALGLS--Q-----LKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQK- 293 (375)
T ss_dssp ESSCCCBCCCCHHHHHHHHH--H-----HTTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGG-
T ss_pred cccccccCCCCHHHHHHHHH--H-----HHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCcc-
Confidence 1223333222222 1 234667888889999999999999888887655 23 34457777631
Q ss_pred CCcccCCCCCC-ChHHHHHHHHHhCCeec
Q 014172 401 GSEAEGFGKIE-NSESLCRYLLDKAQVLL 428 (429)
Q Consensus 401 ~~~~~~~~~~~-~~~~~~~~Ll~~~gV~v 428 (429)
+ . +..+++++|.++ ||.+
T Consensus 294 ~---------~~~~~~l~~~L~~~-gi~v 312 (375)
T 2fnu_A 294 F---------FTCKKLILESLHKR-GILA 312 (375)
T ss_dssp G---------GGGHHHHHHHHHHT-TEEC
T ss_pred c---------cchHHHHHHHHHHC-CCCc
Confidence 0 1 467889888655 9876
No 168
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.95 E-value=5.7e-27 Score=236.34 Aligned_cols=319 Identities=11% Similarity=0.038 Sum_probs=207.6
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.+||+..|. ..++. |+++.+++.+++.+. ..|....+..+.++++++++.+.++ ...++|++|+|+++++.
T Consensus 42 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA~~ 118 (448)
T 3dod_A 42 NGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKI-AHSTLLGMTNVPATQLAETLIDISP--KKLTRVFYSDSGAEAME 118 (448)
T ss_dssp TSCEEEETTHHHHTCSSCBSCHHHHHHHHHHHTTC-SCCCCSSSEEHHHHHHHHHHHHHSC--TTEEEEEEESSHHHHHH
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhc-cCccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHHHHH
Confidence 467799999874 34443 799999999998654 3344555667889999999988775 34579999999999999
Q ss_pred HHHHHhcC----CC----CEEEEcCCCCCChHHHHHHcCC-------------EEEEecCCCCCCCCC-----------C
Q 014172 170 QAVLAVCS----PG----DEVIIPAPFWVSYPEMARIADA-------------TPVILPTRISENFLL-----------D 217 (429)
Q Consensus 170 ~~l~~l~~----~g----d~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~~~-----------d 217 (429)
.++++++. +| |+|++.+|+|+++...+...+. .+..++.. +.+.. |
T Consensus 119 ~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d 196 (448)
T 3dod_A 119 IALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIP--YVYRSESGDPDECRDQC 196 (448)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCC--CCTTSSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCC--ccccCCccchhhhhHHH
Confidence 99999865 44 9999999999887655444332 22333332 21222 4
Q ss_pred HHHHHhhcc---cCCcEEEEcCCC-CCcc-CCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCC
Q 014172 218 PKVLESKLT---EKSRLLILCSPS-NPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 292 (429)
Q Consensus 218 ~e~l~~~l~---~~~~~i~l~~p~-NPtG-~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~ 292 (429)
+++|+++++ +++++|+++.++ |++| .+.+++++++|.++|++| |+++|+||+|.++.+.|... ..... +
T Consensus 197 ~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~-~~~lI~DEv~~g~g~~g~~~-a~~~~----~ 270 (448)
T 3dod_A 197 LRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTY-DVLMIVDEVATGFGRTGKMF-ACEHE----N 270 (448)
T ss_dssp HHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSSS-GGGGG----T
T ss_pred HHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHh-CCEEEEeccccCCCcccchh-hhhhc----C
Confidence 888998886 345566666666 8888 556788899999999999 99999999999876554321 11111 1
Q ss_pred ceEEEeccChhcccccc-eeeEEEcCHHHHHHHHH-------HhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 014172 293 RTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNK-------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 364 (429)
Q Consensus 293 ~~i~~~S~SK~~~~~G~-R~G~v~~~~~~~~~l~~-------~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~ 364 (429)
....+.+|||.++ .|+ |+||+++++++++.+.. .....+++.+.+++.++.++|+... .++.+++.++..
T Consensus 271 ~~~di~t~sK~l~-~G~~~ig~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~-~~~~~~~~~~~~ 348 (448)
T 3dod_A 271 VQPDLMAAGKGIT-GGYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFE-SENIVEQVAEKS 348 (448)
T ss_dssp CCCSEEEECGGGG-TTSSCCEEEEEEHHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHH-HTTHHHHHHHHH
T ss_pred CCCCEEEeccccc-CCcCceEEEEECHHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHh-cccHHHHHHHHH
Confidence 1122457999998 695 99999999999988865 3344566789999999999987411 023455555555
Q ss_pred HHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCC-ChHHHHHHHHHhCCeec
Q 014172 365 RERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE-NSESLCRYLLDKAQVLL 428 (429)
Q Consensus 365 ~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~Ll~~~gV~v 428 (429)
+..++.+.+ +..++.+...++.|. |+|+.++...... ..+.... ...++++.|+++ ||.+
T Consensus 349 ~~~~~~l~~-l~~~~~~~~~~~~g~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~-Gv~~ 409 (448)
T 3dod_A 349 KKLHFLLQD-LHALPHVGDIRQLGF-MCGAELVRSKETK-EPYPADRRIGYKVSLKMREL-GMLT 409 (448)
T ss_dssp HHHHHHHHH-HTTSTTEEEEEEETT-EEEEEECSBTTTT-BCCCGGGCHHHHHHHHHHHT-TEEC
T ss_pred HHHHHHHHH-HhcCCCeEEEEeeeE-EEEEEEccCcccc-cccchhhHHHHHHHHHHHHC-CcEE
Confidence 555666666 656655555555555 5777776421100 0000000 036899999877 8876
No 169
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.95 E-value=3e-27 Score=238.90 Aligned_cols=308 Identities=15% Similarity=0.051 Sum_probs=216.5
Q ss_pred cCC--CeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHH
Q 014172 93 AGV--SVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (429)
Q Consensus 93 ~g~--~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~a 167 (429)
.|+ .+||+..|. ..++. +|++.+++.+++.+.. .+....+..+...++++++.+.++ ...++|++|+|++++
T Consensus 71 dG~~~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~~L~e~la~~~~--~~~~~v~~~~sGseA 147 (457)
T 3tfu_A 71 DGQPIEVLDAMSSWWTAIHGHGHPALDQALTTQLRVMN-HVMFGGLTHEPAARLAKLLVDITP--AGLDTVFFSDSGSVS 147 (457)
T ss_dssp TTEEEEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCS-CCCSSSEECHHHHHHHHHHHHHSS--TTEEEEEEESSHHHH
T ss_pred CCCeeEEEECCCcHhhhccCCCCHHHHHHHHHHHHhcc-CccccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCcHHHH
Confidence 577 899999884 55554 7899999999887632 222222344566677777766665 345799999999999
Q ss_pred HHHHHHHhcC-------CC-CEEEEcCCCCCChHHHHHHcC--------------CEEEEecCCCCCCCCCCHHHHHhhc
Q 014172 168 ILQAVLAVCS-------PG-DEVIIPAPFWVSYPEMARIAD--------------ATPVILPTRISENFLLDPKVLESKL 225 (429)
Q Consensus 168 l~~~l~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~g--------------~~~~~v~~~~~~~~~~d~e~l~~~l 225 (429)
++.+++.++. +| +.|++.+++|.++...+...+ ..+..++.........|++.|++++
T Consensus 148 ~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l 227 (457)
T 3tfu_A 148 VEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQL 227 (457)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHH
Confidence 9999998865 55 589999999988765554442 1233344332221224889999988
Q ss_pred c---cCCcEEEEcC-CCCCccCCC-CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEecc
Q 014172 226 T---EKSRLLILCS-PSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGF 300 (429)
Q Consensus 226 ~---~~~~~i~l~~-p~NPtG~~~-~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 300 (429)
+ +++++|+++. ++||+|.++ +.+.+++|.++|++| |+++|+||+|.+|.+.|.. ..+..+.. ... +.||
T Consensus 228 ~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~-gillI~DEv~~g~gr~G~~-~a~~~~~~-~pd---iit~ 301 (457)
T 3tfu_A 228 AQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRY-EVLLIFDEIATGFGRTGAL-FAADHAGV-SPD---IMCV 301 (457)
T ss_dssp HHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSS-STHHHHTC-CCS---EEEE
T ss_pred HhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHc-CCEEEEEcCccCCccccch-hHhHhcCC-Cce---EEEE
Confidence 7 5677888877 899999876 777899999999999 9999999999987654432 11111111 122 3389
Q ss_pred Chhccccc-ceeeEEEcCHHHHHHHHHH-----hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHH
Q 014172 301 SKAFAMTG-WRLGYIAGPKHFVAACNKI-----QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKS 374 (429)
Q Consensus 301 SK~~~~~G-~R~G~v~~~~~~~~~l~~~-----~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~ 374 (429)
||.++ .| +|+||+++++++++.+... ....+++.+.+++.++.++|+. .++ +...+.++++++++.+.
T Consensus 302 sK~l~-gG~~~lG~v~~~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~---~~~--~~~~~~~~~~~~~l~~~ 375 (457)
T 3tfu_A 302 GKALT-GGYLSLAATLCTADVAHTISAGAAGALMHGPTFMANPLACAVSVASVEL---LLG--QDWRTRITELAAGLTAG 375 (457)
T ss_dssp CGGGG-TTSSCCEEEEEEHHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHH---HHT--SCHHHHHHHHHHHHHHH
T ss_pred Chhhh-CCCcceEEEEEcHHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHH---Hhh--hHHHHHHHHHHHHHHHH
Confidence 99987 56 7999999999999988622 2334567899999999998874 111 23455566666777777
Q ss_pred hccC---CCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 375 FGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 375 L~~l---~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|+++ +++..+++.|.| ++++++.. .+..+++++|+++ ||.+
T Consensus 376 L~~l~~~~~v~~vr~~G~~-~~i~l~~~-----------~~~~~~~~~l~~~-Gv~v 419 (457)
T 3tfu_A 376 LDTARALPAVTDVRVCGAI-GVIECDRP-----------VDLAVATPAALDR-GVWL 419 (457)
T ss_dssp HGGGGGSTTEEEEEECSSC-EEEEESSC-----------CCHHHHHHHHHHT-TEEC
T ss_pred HHHHhcCCCeeeeecCCeE-EEEEECCc-----------ccHHHHHHHHHHC-CeEE
Confidence 6654 556666666654 77788642 2578999999887 8876
No 170
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.95 E-value=3.2e-27 Score=238.41 Aligned_cols=320 Identities=15% Similarity=0.122 Sum_probs=214.0
Q ss_pred cCCCeEEcCCC--CCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAG--EPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g--~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.+||+..| ...++. |+.+.+++.+++.+. ..|+...+..+++.++++++.+.++.. ..++|++|+|++++++
T Consensus 59 ~g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~~~sGseA~~ 136 (451)
T 3oks_A 59 DGNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDF-THTCFMVTPYEGYVAVCEQLNRLTPVR-GDKRSALFNSGSEAVE 136 (451)
T ss_dssp TSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHTTC-SCCTTTTSCCHHHHHHHHHHHHHSSCC-SSEEEEEESSHHHHHH
T ss_pred CCCEEEEcCCCccccccCCCCHHHHHHHHHHHHhc-ccccCCccCCHHHHHHHHHHHHhCCcC-CCCEEEEeCcHHHHHH
Confidence 57789999988 445554 899999999998654 456655677888999999998876532 3479999999999999
Q ss_pred HHHHHhcC--CCCEEEEcCCCCCChHHHHHHcCC--------------EEEEecCCCC--------CCCC---CCHHHHH
Q 014172 170 QAVLAVCS--PGDEVIIPAPFWVSYPEMARIADA--------------TPVILPTRIS--------ENFL---LDPKVLE 222 (429)
Q Consensus 170 ~~l~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~--------------~~~~v~~~~~--------~~~~---~d~e~l~ 222 (429)
.+++.... .++.|++.+++|+++...+...+. .++.++.... +... -+++.++
T Consensus 137 ~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 216 (451)
T 3oks_A 137 NAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAI 216 (451)
T ss_dssp HHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHH
Confidence 99987764 448999999999988766554432 3455655310 0000 1244443
Q ss_pred hhc----ccCCcEEEEcCCCCCcc--CCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEE
Q 014172 223 SKL----TEKSRLLILCSPSNPTG--SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLT 296 (429)
Q Consensus 223 ~~l----~~~~~~i~l~~p~NPtG--~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~ 296 (429)
+.+ .++..+++++.|.|++| .+.+.+.+++|.++|++| |+++|+||+|.++.+.|.. ..+..+. ....
T Consensus 217 ~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~-g~~lI~DEv~~g~g~~g~~-~~~~~~~----~~pd 290 (451)
T 3oks_A 217 TVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKN-DVVFIADEVQTGFARTGAM-FACEHEG----IDPD 290 (451)
T ss_dssp HHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSS-SGGGGGT----CCCS
T ss_pred HHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHc-CCEEEEEecccCCCccccc-hhhhhcC----CCCC
Confidence 433 33556667777776665 345777899999999999 9999999999987655431 1222221 1112
Q ss_pred EeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhc
Q 014172 297 VNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG 376 (429)
Q Consensus 297 ~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~ 376 (429)
+.||||.++ .|+|+||+++++++++.+.......+++.+.++|.++.++|+... .++.+++.++..+..++.+.+.+.
T Consensus 291 i~t~sK~l~-~G~~iG~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~L~~~~~ 368 (451)
T 3oks_A 291 LIVTAKGIA-GGLPLSAVTGRAEIMDSPHVSGLGGTYGGNPIACAAALATIETIE-SEGLVARAQQIEKIMKDRLGRLQA 368 (451)
T ss_dssp EEEECGGGG-TTSSCEEEEEEHHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeehhhhh-CCcceEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHh
Confidence 448999998 599999999999999888766666677889999999999987410 022334444444444444444444
Q ss_pred cCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 377 ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 377 ~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+++.+...++.|.| +|+.+....... .......++++.|+++ ||.+
T Consensus 369 ~~~~~~~~~~~G~~-~~~~~~~~~~~~----~~~~~~~~~~~~l~~~-Gv~v 414 (451)
T 3oks_A 369 EDDRIGDVRGRGAM-IAMELVKAGTTE----PDADLTKALCAGAHAA-GVIV 414 (451)
T ss_dssp HCTTEEEEEEETTE-EEEEEBSTTSCC----BCHHHHHHHHHHHHHT-TEEC
T ss_pred hCCCeEEEEEeeEE-EEEEEecCccCC----CCHHHHHHHHHHHHhC-CcEE
Confidence 55556555555654 667663200000 0001366788888876 8875
No 171
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.95 E-value=9.4e-27 Score=228.56 Aligned_cols=285 Identities=16% Similarity=0.232 Sum_probs=208.0
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 174 (429)
.++++|+.|.|++. + +.+++.+.+... .|++..+..++++++++++. .+++++++|+++++..++.+
T Consensus 6 ~~~~~l~~~~~~~~--~-~~~~~~~~~~~~--~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~~~~~~~ 72 (374)
T 3uwc_A 6 VPYSYLERQFADIE--P-YLNDLREFIKTA--DFTLGAELEKFEKRFAALHN--------APHAIGVGTGTDALAMSFKM 72 (374)
T ss_dssp BCSCCHHHHTSSCH--H-HHHHHHHHHHHT--CCSSCHHHHHHHHHHHHHTT--------CSEEEEESCHHHHHHHHHHH
T ss_pred ceeeccccCCCCch--H-HHHHHHHHHHcC--CcccChhHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHH
Confidence 35678888887754 3 888888887664 57777888999999999863 23889999999999999999
Q ss_pred h-cCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHH
Q 014172 175 V-CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEI 253 (429)
Q Consensus 175 l-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I 253 (429)
+ +++||+|+++.|+|.++...++..|++++.++++ +++.+|++.+++++++++++|+ |+||||.+.+ +++|
T Consensus 73 ~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~---~~~i 144 (374)
T 3uwc_A 73 LNIGAGDEVITCANTFIASVGAIVQAGATPVLVDSE--NGYVIDPEKIEAAITDKTKAIM---PVHYTGNIAD---MPAL 144 (374)
T ss_dssp TTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBC--TTSSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC---HHHH
T ss_pred cCCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHhCCCCceEEE---EeCCcCCcCC---HHHH
Confidence 9 9999999999999999999999999999999986 4577999999999998888877 8999999998 8999
Q ss_pred HHHHHhCCCeEEEEccCCcccc-cCCCCCCccccCCCCCCceEEEeccC--hhcccccceeeEEEcC-HHHHHHHHHHhh
Q 014172 254 ARIVAKHPRLLVLSDEIYEHII-YAPATHTSFASLPGMWERTLTVNGFS--KAFAMTGWRLGYIAGP-KHFVAACNKIQS 329 (429)
Q Consensus 254 ~~~a~~~~~i~vi~Deay~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~~~~G~R~G~v~~~-~~~~~~l~~~~~ 329 (429)
.++|++| |+++|+|++|..+. +++.. ...+ .++++.||| |.++.+|. .||++++ +++.+.+.....
T Consensus 145 ~~~~~~~-~~~li~D~~~~~g~~~~~~~---~~~~-----~d~~~~s~~~~K~l~~~g~-~g~~~~~~~~~~~~~~~~~~ 214 (374)
T 3uwc_A 145 AKIAKKH-NLHIVEDACQTILGRINDKF---VGSW-----GQFACFSLHPLKNLNVWSD-AGVIITHSDEYAEKLRLYRN 214 (374)
T ss_dssp HHHHHHT-TCEEEEECTTCTTCEETTEE---TTSS-----SSEEEEECSSSSSSCCSSC-CEEEEESCHHHHHHHHHHTB
T ss_pred HHHHHHc-CCEEEEeCCCccCceeCCee---cccc-----ccEEEEeCCCCCcCCccce-eEEEEeCCHHHHHHHHHHHh
Confidence 9999999 99999999998643 22211 1111 247788877 99974365 8888875 467777765542
Q ss_pred c------------ccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCC-ceeec-CCceEEEEEe
Q 014172 330 Q------------FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG-VKMSE-PQGAFYLFID 395 (429)
Q Consensus 330 ~------------~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g-~~~~~-p~~~~~~~~~ 395 (429)
. .....+.+...+ .... .+.+++..++.+++++.+.+.|+++++ +++.. +.++...|..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~aa~--~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 287 (374)
T 3uwc_A 215 HGLINRDVCVEYGINCRMDTIQAVI--ANRL-----MNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHI 287 (374)
T ss_dssp TTEEETTEESSCCCBCBCCHHHHHH--HHHH-----GGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSS
T ss_pred cCccccCccccccccCCCCHHHHHH--HHHH-----HHHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEE
Confidence 1 111123332222 2222 233566777788888999999998866 76642 3333222221
Q ss_pred cCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 396 FSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 396 l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++-.. .+..++.++|.++ ||.+
T Consensus 288 ~~~~~----------~~~~~l~~~L~~~-gi~v 309 (374)
T 3uwc_A 288 YVLRV----------KYRDQLFQYLKDN-GIEV 309 (374)
T ss_dssp EEEEE----------TTHHHHHHHHHHT-TBCC
T ss_pred EEEEc----------CCHHHHHHHHHHC-CCcc
Confidence 11000 1577888888766 8865
No 172
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.95 E-value=5.1e-27 Score=236.63 Aligned_cols=310 Identities=15% Similarity=0.121 Sum_probs=211.7
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCC-CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPN-AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~-~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
.|+.++|++.|. .+++. |+++.+++.+.+.+.. +... .+..++++++++.+.+.++ .++++|++|+|+++++
T Consensus 48 ~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~ggsea~ 123 (449)
T 3a8u_X 48 KGRKVYDSLSGLWTCGAGHTRKEIQEAVAKQLSTLD--YSPGFQYGHPLSFQLAEKITDLTP--GNLNHVFFTDSGSECA 123 (449)
T ss_dssp TCCEEEETTHHHHTCTTCBSCHHHHHHHHHHTTTCS--CCCSSSCCCHHHHHHHHHHHTTSS--TTEEEEEEESSHHHHH
T ss_pred CCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhCC--CccccccCCHHHHHHHHHHHHhCC--CCCCEEEEcCcHHHHH
Confidence 456789998776 34544 7899999999876532 3222 3556677888888877665 3668999999999999
Q ss_pred HHHHHHhcC--------CCCEEEEcCCCCCChHH-HHHHcCC------------EEEEecCCC--CCCC-CCC-------
Q 014172 169 LQAVLAVCS--------PGDEVIIPAPFWVSYPE-MARIADA------------TPVILPTRI--SENF-LLD------- 217 (429)
Q Consensus 169 ~~~l~~l~~--------~gd~Vlv~~p~y~~~~~-~~~~~g~------------~~~~v~~~~--~~~~-~~d------- 217 (429)
..++++++. +||+|++.+|+|+++.. .+...|. .++.++.+. ..++ .+|
T Consensus 124 ~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~ 203 (449)
T 3a8u_X 124 LTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIA 203 (449)
T ss_dssp HHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHH
Confidence 999988764 67999999999987643 4554442 234444321 1111 246
Q ss_pred -HHHHHhhcc----cCCcEEEEcCCCCCccC-CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCC
Q 014172 218 -PKVLESKLT----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 291 (429)
Q Consensus 218 -~e~l~~~l~----~~~~~i~l~~p~NPtG~-~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~ 291 (429)
+++|+++++ +++++|+++..+|+||. +.+++++++|.++|++| |+++|+||+|.++.+.+.. ..+..+.. .
T Consensus 204 ~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~-~~~li~Dev~~~~g~~g~~-~~~~~~~~-~ 280 (449)
T 3a8u_X 204 LADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQH-NILLVFDEVITGFGRTGSM-FGADSFGV-T 280 (449)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSS-SHHHHHTC-C
T ss_pred HHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHh-CCEEEEeccccCccccCcc-hhhhhcCC-C
Confidence 999999886 34555544433578996 56799999999999999 9999999999876544321 11111111 1
Q ss_pred CceEEEeccChhccccc-ceeeEEEcCHHHHHHHHHH---------hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHH
Q 014172 292 ERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI---------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 361 (429)
Q Consensus 292 ~~~i~~~S~SK~~~~~G-~R~G~v~~~~~~~~~l~~~---------~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~ 361 (429)
.. +.||||.++ +| +|+||+++++++++.+... ....+.+.+.+++.++.++|+. .++ +++.
T Consensus 281 ~d---i~s~sK~l~-~G~~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~---~~~--~~~~ 351 (449)
T 3a8u_X 281 PD---LMCIAKQVT-NGAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCL---LQK--ENLV 351 (449)
T ss_dssp CS---EEEECGGGG-TTSSCCEEEEEEHHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHH---HHH--TTHH
T ss_pred CC---EEEEccccc-CCCCceEEEEECHHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHH---HHh--cCHH
Confidence 12 238999998 68 9999999999998888753 1223556788889888888874 122 2466
Q ss_pred HHHHHHHHHHHHHhccCCCc---eeecCCceEEEEEecCCccCCcccCCCCCC--ChHHHHHHHHHhCCeec
Q 014172 362 KAFRERRDFLVKSFGELEGV---KMSEPQGAFYLFIDFSTYYGSEAEGFGKIE--NSESLCRYLLDKAQVLL 428 (429)
Q Consensus 362 ~~~~~~r~~l~~~L~~l~g~---~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~Ll~~~gV~v 428 (429)
++++++++++.+.|++++++ ...++ .|+|+|++++.... .. +..+++++|+++ ||.+
T Consensus 352 ~~~~~~~~~l~~~L~~l~~~~~~~~~~~-~g~~~~i~~~~~~~--------~~~~~~~~~~~~l~~~-Gv~v 413 (449)
T 3a8u_X 352 QSVAEVAPHFEKALHGIKGAKNVIDIRN-FGLAGAIQIAPRDG--------DAIVRPFEAGMALWKA-GFYV 413 (449)
T ss_dssp HHHHHHHHHHHHHHHTTTTSTTEEEEEE-ETTEEEEEECCBTT--------BSSHHHHHHHHHHHHH-TEEC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEEee-eEEEEEEEEecCcc--------cccccHHHHHHHHHHC-CcEE
Confidence 77788888888888765322 22334 45668999874210 00 123799999876 9876
No 173
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.95 E-value=2.7e-26 Score=227.43 Aligned_cols=281 Identities=17% Similarity=0.179 Sum_probs=200.5
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCC--CHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCEEEEcC
Q 014172 110 PVLIAEAGINAIREGFTRYTPNAG--TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPA 186 (429)
Q Consensus 110 p~~v~~a~~~~~~~~~~~Y~~~~G--~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l-~~~gd~Vlv~~ 186 (429)
++++.+++.+.+.+ .|.+..| ..+++++++++++ .++|++|+|+++++..++.++ +++||+|+++.
T Consensus 11 ~~~v~~a~~~~~~~---~~~~~~g~~~~~l~~~la~~~~--------~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~ 79 (394)
T 1o69_A 11 GGNELKYIEEVFKS---NYIAPLGEFVNRFEQSVKDYSK--------SENALALNSATAALHLALRVAGVKQDDIVLASS 79 (394)
T ss_dssp -CCHHHHHHHHHHH---TTTSCTTHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEES
T ss_pred CHHHHHHHHHHHHc---CCccCCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECC
Confidence 46778888888765 3656567 7899999999973 268999999999999999999 89999999999
Q ss_pred CCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc---CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCe
Q 014172 187 PFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL 263 (429)
Q Consensus 187 p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~---~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i 263 (429)
|+|.++...++..|++++.++++ +++.+|++.+++++++ ++++|++++ |||...+ +++|.++|++| |+
T Consensus 80 ~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~---l~~i~~l~~~~-~~ 150 (394)
T 1o69_A 80 FTFIASVAPICYLKAKPVFIDCD--ETYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAK---MDEIVEICKEN-DI 150 (394)
T ss_dssp SSCGGGTHHHHHTTCEEEEECBC--TTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCC---HHHHHHHHHHT-TC
T ss_pred CccHHHHHHHHHcCCEEEEEEeC--CCCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhh---HHHHHHHHHHc-CC
Confidence 99999999999999999999986 4577999999999976 789999875 8998877 99999999999 99
Q ss_pred EEEEccCCc-ccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcC-HHHHHHHHHHhhcccCC-------
Q 014172 264 LVLSDEIYE-HIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQFTSG------- 334 (429)
Q Consensus 264 ~vi~Deay~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~-~~~~~~l~~~~~~~~~~------- 334 (429)
++|+|++|. ++.+.+... ..+ .+ +.+.||||..+++|.|+||++++ +++++.+.........+
T Consensus 151 ~li~Dea~~~g~~~~~~~~---~~~---~~--~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 222 (394)
T 1o69_A 151 VLIEDAAEALGSFYKNKAL---GTF---GE--FGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHL 222 (394)
T ss_dssp EEEEECTTCTTCEETTEET---TSS---SS--EEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCS
T ss_pred EEEEECcCcccceeCCccc---ccc---cC--cEEEEEeCCccCCCCCceEEEECCHHHHHHHHHHHHhccccCcccccc
Confidence 999999999 555543211 111 12 55666754445567899999995 88888887654332111
Q ss_pred -------CchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCC----ceE-EEEEecCCcc--
Q 014172 335 -------ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ----GAF-YLFIDFSTYY-- 400 (429)
Q Consensus 335 -------~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~----~~~-~~~~~l~~~~-- 400 (429)
.+.+...++...+ +++++..++++++++++.+.|+++ +++.++. +++ .+++.++...
T Consensus 223 ~~g~~~~~~~~~aa~~l~~l-------~~l~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~ 293 (394)
T 1o69_A 223 DYGYNYRLSNVLGAIGVAQM-------EVLEQRVLKKREIYEWYKEFLGEY--FSFLDELENSRSNRWLSTALINFDKNE 293 (394)
T ss_dssp SCCCBCBCCHHHHHHHHHHH-------TTHHHHHHHHHHHHHHHHHHHTTT--EECCCCCTTEECCCSSEEEEESCCGGG
T ss_pred ccCcccCcCHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHhccc--ccccCCCCCCcceeEEEEEEecchhhc
Confidence 1222322222222 235667788889999999999876 5554432 343 3567765210
Q ss_pred ----C----CcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 401 ----G----SEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 401 ----~----~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+ ....+.....+..++.+.|.++ ||.+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-gI~v 328 (394)
T 1o69_A 294 LNACQKDINISQKNITLHPKISKLIEDLKNK-QIET 328 (394)
T ss_dssp SCCCCEEEECCCCCCCCCHHHHHHHHHHHHT-TCCC
T ss_pred cccccccccccccccccccCHHHHHHHHHHc-CCcc
Confidence 0 0000000001467888888664 8876
No 174
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.95 E-value=9.3e-27 Score=230.96 Aligned_cols=298 Identities=13% Similarity=0.110 Sum_probs=207.5
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCC-CCCCC------CCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGF-TRYTP------NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~-~~Y~~------~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
.+++++.+ +++ |+.+.+++.+.+.+.. ..|.. .....++++.+.+++.+.+|. +++.|++++| ++++
T Consensus 25 ~~~~~~~~-~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~--~~~~i~~~sG-t~a~ 98 (405)
T 2vi8_A 25 KIELIASE-NFV--SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGA--EHANVQPHSG-AQAN 98 (405)
T ss_dssp SEECCTTC-CCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC--SEEECCCSSH-HHHH
T ss_pred ceeeccCc-ccC--CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCC--CceEEEecCc-HHHH
Confidence 46666544 443 8899999988875321 22211 112345665455566666664 3334445666 9999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCCChHH-H--HHHcC--CEEEEecCCCCCCCCCCHHHHHhhccc-CCcEEEEcCCCCCcc
Q 014172 169 LQAVLAVCSPGDEVIIPAPFWVSYPE-M--ARIAD--ATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTG 242 (429)
Q Consensus 169 ~~~l~~l~~~gd~Vlv~~p~y~~~~~-~--~~~~g--~~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~p~NPtG 242 (429)
..++.+++++||+|+++.|+|+.+.. . +...| .+++.+++++ +++.+|++++++++++ ++++|++ +|+|. |
T Consensus 99 ~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~~-~~~~~-~ 175 (405)
T 2vi8_A 99 MAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDP-ETHVIDYDDVREKARLHRPKLIVA-AAAAY-P 175 (405)
T ss_dssp HHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCSEEEE-CCSSC-C
T ss_pred HHHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEeccccc-ccCCcCHHHHHHHHHhcCCeEEEE-eCCCC-C
Confidence 99999999999999999999988753 1 12334 4888887753 3567899999999986 8888877 55553 5
Q ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcc-cccceeeEEEcCHHHH
Q 014172 243 SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYIAGPKHFV 321 (429)
Q Consensus 243 ~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~R~G~v~~~~~~~ 321 (429)
...+ +++|.++|++| |+++|+||+|....+...... ..+. ...++++||||.++ +.| ||++++++++
T Consensus 176 ~~~~---l~~i~~l~~~~-~~~li~Dea~~~g~~~~~~~~--~~~~---~~di~~~s~sK~~~g~~g---G~~~~~~~~~ 243 (405)
T 2vi8_A 176 RIID---FAKFREIADEV-GAYLMVDMAHIAGLVAAGLHP--NPVP---YAHFVTTTTHKTLRGPRG---GMILCQEQFA 243 (405)
T ss_dssp SCCC---HHHHHHHHHHH-TCEEEEECTTTHHHHHTTSSC--CSTT---TCSEEEEESSSTTCCCSC---EEEEECHHHH
T ss_pred ccCC---HHHHHHHHHHc-CCEEEEEccccccccccCcCC--Cccc---cCCEEEEeccccCCCCCC---eEEEEcHHHH
Confidence 5556 89999999999 999999999995433221111 1111 23388999999997 566 9999999999
Q ss_pred HHHHHHhhcccCCCchHHHH-HHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecC-CceEEEEEecCCc
Q 014172 322 AACNKIQSQFTSGASSISQK-AGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP-QGAFYLFIDFSTY 399 (429)
Q Consensus 322 ~~l~~~~~~~~~~~~~~~q~-aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p-~~~~~~~~~l~~~ 399 (429)
+.+......+..+.+.+.+. ++.++++.. ..+++++++++++++++++.+.|+++ |+++..| .+++++|++++..
T Consensus 244 ~~l~~~~~~~~~~~~~~~~~aa~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~ 320 (405)
T 2vi8_A 244 KQIDKAIFPGIQGGPLMHVIAAKAVAFGEA--LQDDFKAYAKRVVDNAKRLASALQNE-GFTLVSGGTDNHLLLVDLRPQ 320 (405)
T ss_dssp HHHHHHHTTTTCSSCCHHHHHHHHHHHHHH--HSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGG
T ss_pred HHHHhhhcccccCCCCHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCCceEEEEEccCC
Confidence 88877655555444344444 444566531 13578899999999999999999998 8888765 4678899998742
Q ss_pred cCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 400 YGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+ .+..++.+.|.+ +||.+
T Consensus 321 -~---------~~~~~~~~~l~~-~gi~v 338 (405)
T 2vi8_A 321 -Q---------LTGKTAEKVLDE-VGITV 338 (405)
T ss_dssp -T---------CCHHHHHHHHHH-HTEEC
T ss_pred -C---------CCHHHHHHHHHH-cCcee
Confidence 0 257788887755 58875
No 175
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.95 E-value=4.7e-27 Score=233.68 Aligned_cols=194 Identities=16% Similarity=0.190 Sum_probs=156.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH----HHHcCC
Q 014172 126 TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADA 201 (429)
Q Consensus 126 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~ 201 (429)
.+| ++++..+|+++++++++ ..+.|++++| ++++..++. ++++||+|++++|+|.+.... ++..|+
T Consensus 62 ~r~-~~p~~~~l~~~la~~~g-------~~~~i~~~sG-~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~ 131 (403)
T 3cog_A 62 SRS-GNPTRNCLEKAVAALDG-------AKYCLAFASG-LAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGL 131 (403)
T ss_dssp -----CHHHHHHHHHHHHHHT-------CSEEEEESCH-HHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTC
T ss_pred cCC-CCchHHHHHHHHHHHhC-------CCcEEEECCH-HHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCC
Confidence 344 45667899999999874 1256666665 589999998 899999999999999875443 357899
Q ss_pred EEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCC-eEEEEccCCcccccCCCC
Q 014172 202 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR-LLVLSDEIYEHIIYAPAT 280 (429)
Q Consensus 202 ~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~-i~vi~Deay~~~~~~~~~ 280 (429)
+++.++.+ |++.+++++++++++|++++|+||||.+++ +++|+++|++| | +++|+|++|..+.+.
T Consensus 132 ~v~~v~~~-------d~~~l~~~i~~~t~~v~~~~p~nptG~~~~---l~~i~~la~~~-g~~~livD~~~~~~~~~--- 197 (403)
T 3cog_A 132 KISFVDCS-------KIKLLEAAITPETKLVWIETPTNPTQKVID---IEGCAHIVHKH-GDIILVVDNTFMSPYFQ--- 197 (403)
T ss_dssp EEEEECTT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTSS-SCCEEEEECTTTCTTTC---
T ss_pred EEEEECCC-------CHHHHHHhcCcCCeEEEEECCCCCCCeeeC---HHHHHHHHHHc-CCCEEEEECCCcccccC---
Confidence 99999863 899999999999999999999999999999 99999999999 9 999999999986542
Q ss_pred CCccccCCCCCCceEEEeccChhcccccc-eeeEEEcC-HHHHHHHHHHhhcccCCCchHHHHHHHHHHhc
Q 014172 281 HTSFASLPGMWERTLTVNGFSKAFAMTGW-RLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGL 349 (429)
Q Consensus 281 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~-R~G~v~~~-~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~ 349 (429)
.++ . .+.++++.|+||.++.+|. |+||++++ +++++.+......++.+.+.+.+.++...++.
T Consensus 198 -~~~-~----~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~ 262 (403)
T 3cog_A 198 -RPL-A----LGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKT 262 (403)
T ss_dssp -CTT-T----TTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT
T ss_pred -Ccc-c----cCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH
Confidence 111 1 3567999999999987664 79999984 78888888777666767788888888777764
No 176
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.95 E-value=1e-26 Score=234.45 Aligned_cols=324 Identities=13% Similarity=0.106 Sum_probs=225.7
Q ss_pred CcccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCC-CCCCCC---CCCHHHH--HHH
Q 014172 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGF-TRYTPN---AGTLELR--SAI 141 (429)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~-~~Y~~~---~G~~~lr--~~i 141 (429)
+.+++..+.++.+..+.+...+.. +.|+|..+++. .|+.+.+++.+.+.+.+ ..|... .|...++ +++
T Consensus 22 ~~~~l~~~~~~i~~~~~~~~~~~~----~~i~l~~~~~~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~ 95 (447)
T 3h7f_A 22 MSAPLAEVDPDIAELLAKELGRQR----DTLEMIASENF--VPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENL 95 (447)
T ss_dssp GGCCHHHHCHHHHHHHHHHHHHHH----HSEECCTTCCC--CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHH
T ss_pred hHHHHHhCCHHHHHHHHHHHHHHh----CceeEecCCCC--CCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHH
Confidence 356667777766555544333322 47999777655 38899999988775322 223221 2555554 666
Q ss_pred H-HHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChH-H--H--HHHcCCEEEEecCCCCCCCC
Q 014172 142 C-HKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP-E--M--ARIADATPVILPTRISENFL 215 (429)
Q Consensus 142 a-~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~-~--~--~~~~g~~~~~v~~~~~~~~~ 215 (429)
+ +++.+.+|.+ . ..++++|+++++..++.+++++||+|++++|+|.++. . . ..-.+..++.++++++ ++.
T Consensus 96 a~~~la~~~g~~--~-~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~ 171 (447)
T 3h7f_A 96 ARDRAKALFGAE--F-ANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPA-THL 171 (447)
T ss_dssp HHHHHHHHHTCS--E-EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTT-TCS
T ss_pred HHHHHHHHcCCC--c-eEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcc-cCC
Confidence 6 7777777742 2 3333778889999999999999999999999998732 1 1 1223567777777643 467
Q ss_pred CCHHHHHhhcc-cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCc-ccccCCCCCCccccCCCCCCc
Q 014172 216 LDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE-HIIYAPATHTSFASLPGMWER 293 (429)
Q Consensus 216 ~d~e~l~~~l~-~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~-~~~~~~~~~~~~~~~~~~~~~ 293 (429)
+|+++|++++. .++++|++++|+||++. + +++|.++|++| |+++|+||+|. ++.+.+... ... . ..
T Consensus 172 ~d~~~l~~~i~~~~~~~i~~~~~~~~~~~--~---l~~i~~l~~~~-g~lli~Dea~~~g~~~~g~~~-~~~--~---~~ 239 (447)
T 3h7f_A 172 IDMDAVRATALEFRPKVIIAGWSAYPRVL--D---FAAFRSIADEV-GAKLLVDMAHFAGLVAAGLHP-SPV--P---HA 239 (447)
T ss_dssp CCHHHHHHHHHHHCCSEEEEECSSCCSCC--C---HHHHHHHHHHH-TCEEEEECTTTHHHHHTTSSC-CST--T---TC
T ss_pred cCHHHHHHHHHhcCCeEEEEcCCCCCCcc--C---HHHHHHHHHHc-CCEEEEECCchhhhhcCCCCC-CCC--C---CC
Confidence 99999999985 47899999999999886 4 89999999999 99999999975 444444321 111 1 23
Q ss_pred eEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCC-CchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHH
Q 014172 294 TLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG-ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLV 372 (429)
Q Consensus 294 ~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~-~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~ 372 (429)
.+++.|+||.+ +|+|.||+++++++++.+.........+ +....+.++..++... .++++++.++++.++++++.
T Consensus 240 di~~~s~sK~l--~G~~gG~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~--~~~~~~~~~~~~~~~~~~l~ 315 (447)
T 3h7f_A 240 DVVSTTVHKTL--GGGRSGLIVGKQQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIA--ATPEFADRQRRTLSGARIIA 315 (447)
T ss_dssp SEEEEESSGGG--CCCSCEEEEECGGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHT--TSHHHHHHHHHHHHHHHHHH
T ss_pred cEEEecCCcCC--CCCCeEEEEECHHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHh--hCHHHHHHHHHHHHHHHHHH
Confidence 48899999987 4899999999999998887765444433 3444455555555431 24567889999999999999
Q ss_pred HHhccC----CCceeec-CCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 373 KSFGEL----EGVKMSE-PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 373 ~~L~~l----~g~~~~~-p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.|.+. +|+++.. +..++++|+++... ....+.+.+++++.||.+
T Consensus 316 ~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~GI~v 365 (447)
T 3h7f_A 316 DRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDS-----------PLDGQAAEDLLHEVGITV 365 (447)
T ss_dssp HHHTSHHHHHTTCEEGGGSCSSSEEEEECTTS-----------SCCHHHHHHHHHHTTEEC
T ss_pred HHHHhccccCCCeEEecCCCCCCEEEEEcCCC-----------CCCHHHHHHHHHHCCeEE
Confidence 999876 5787764 45667788888642 123455566677779976
No 177
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.95 E-value=1.6e-26 Score=226.75 Aligned_cols=270 Identities=20% Similarity=0.258 Sum_probs=202.7
Q ss_pred ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCEEEEcCC
Q 014172 109 TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAP 187 (429)
Q Consensus 109 ~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l-~~~gd~Vlv~~p 187 (429)
.++++.+++.+.+..+ .|.+..+..++++++++++. .+++++++|+++++..++.++ +++||+|+++.|
T Consensus 14 ~~~~v~~a~~~~~~~~--~~~~~~~~~~l~~~la~~~~--------~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~ 83 (367)
T 3nyt_A 14 IKDKIDAGIQRVLRHG--QYILGPEVTELEDRLADFVG--------AKYCISCANGTDALQIVQMALGVGPGDEVITPGF 83 (367)
T ss_dssp HHHHHHHHHHHHHHHC--CCSSCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESS
T ss_pred cCHHHHHHHHHHHhcC--CccCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHhCCCCcCEEEECCC
Confidence 3577888888887764 56667778899999999973 248999999999999999999 899999999999
Q ss_pred CCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEE
Q 014172 188 FWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 267 (429)
Q Consensus 188 ~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~ 267 (429)
+|.++...++..|++++.++++++ ++.+|++.+++++++++++|+ |+||||...+ +++|.++|++| |+++|+
T Consensus 84 ~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~~~---~~~i~~la~~~-~~~li~ 155 (367)
T 3nyt_A 84 TYVATAETVALLGAKPVYVDIDPR-TYNLDPQLLEAAITPRTKAII---PVSLYGQCAD---FDAINAIASKY-GIPVIE 155 (367)
T ss_dssp SCTHHHHHHHHTTCEEEEECBCTT-TCSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHHT-TCCBEE
T ss_pred ccHHHHHHHHHcCCEEEEEecCCc-cCCcCHHHHHHhcCcCCcEEE---eeCCccChhh---HHHHHHHHHHc-CCEEEE
Confidence 999999999999999999998753 477999999999998888877 8899999888 89999999999 999999
Q ss_pred ccCCccc-ccCCCCCCccccCCCCCCceEEEecc--ChhcccccceeeEEEc-CHHHHHHHHHHhhc------------c
Q 014172 268 DEIYEHI-IYAPATHTSFASLPGMWERTLTVNGF--SKAFAMTGWRLGYIAG-PKHFVAACNKIQSQ------------F 331 (429)
Q Consensus 268 Deay~~~-~~~~~~~~~~~~~~~~~~~~i~~~S~--SK~~~~~G~R~G~v~~-~~~~~~~l~~~~~~------------~ 331 (429)
|++|+.. .+.+.. +..+ + ++.+.|| +|.++.+|. .|++++ ++++.+.+...... +
T Consensus 156 D~a~~~g~~~~~~~---~~~~----~-di~~~Sf~~~K~l~~~g~-gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~ 226 (367)
T 3nyt_A 156 DAAQSFGASYKGKR---SCNL----S-TVACTSFFPSAPLGCYGD-GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGV 226 (367)
T ss_dssp ECTTTTTCEETTEE---TTSS----S-SEEEEECCTTSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCC
T ss_pred ECccccCCeECCee---ccCC----C-CEEEEECCCCCcCCCcCc-eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCc
Confidence 9999853 233321 1111 1 4888897 799985476 889888 47788877765432 2
Q ss_pred cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeec-CCce---E-EEEEecCCccCCcccC
Q 014172 332 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-PQGA---F-YLFIDFSTYYGSEAEG 406 (429)
Q Consensus 332 ~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~-p~~~---~-~~~~~l~~~~~~~~~~ 406 (429)
+...+.+...++...++. +++..++.+++++++.+.|+++ ++.+.. +.+. + ++++.++
T Consensus 227 ~~~~~~~~aa~~~~~l~~-------~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~--------- 289 (367)
T 3nyt_A 227 NSRLDTLQAAILLPKLEI-------FEEEIALRQKVAAEYDLSLKQV-GIGTPFIEVNNISVYAQYTVRMD--------- 289 (367)
T ss_dssp BCCCCHHHHHHHHHHHHT-------HHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTEECCCSSEEEECS---------
T ss_pred CCCccHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhccC-CeeccCCCCCCceeeEEEEEEeC---------
Confidence 344566665555555543 3455566677778888888877 554432 2221 1 1223332
Q ss_pred CCCCCChHHHHHHHHHhCCeec
Q 014172 407 FGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 407 ~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+..++.++|.++ ||.+
T Consensus 290 -----~~~~l~~~L~~~-GI~~ 305 (367)
T 3nyt_A 290 -----NRESVQASLKAA-GVPT 305 (367)
T ss_dssp -----SHHHHHHHHHHH-TCCC
T ss_pred -----CHHHHHHHHHHC-CCce
Confidence 567888888766 8865
No 178
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.95 E-value=4.2e-26 Score=225.43 Aligned_cols=217 Identities=15% Similarity=0.170 Sum_probs=172.9
Q ss_pred CCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH----HHHcCCEEEE
Q 014172 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADATPVI 205 (429)
Q Consensus 130 ~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~ 205 (429)
+..+..++++++++++. .++.|++++| ++++..++++++++||.|+++.|+|.+.... ++..|++++.
T Consensus 50 ~~~~~~~l~~~la~~~~-------~~~~i~~~sG-t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~ 121 (386)
T 1cs1_A 50 GNPTRDVVQRALAELEG-------GAGAVLTNTG-MSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLF 121 (386)
T ss_dssp CCHHHHHHHHHHHHHHT-------CSEEEEESSH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEE
T ss_pred CCccHHHHHHHHHHHhC-------CCcEEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEE
Confidence 44566789999998874 2256666555 8999999999999999999999999974443 4678999999
Q ss_pred ecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccc
Q 014172 206 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (429)
Q Consensus 206 v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~ 285 (429)
++.+ |++.+++.+++++++|++++|+||||.+++ +++|.++|++| |+++|+||+|..+.+.. ++
T Consensus 122 ~~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~~~li~De~~~~~~~~~----~~- 185 (386)
T 1cs1_A 122 VDQG-------DEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREV-GAVSVVDNTFLSPALQN----PL- 185 (386)
T ss_dssp ECTT-------CHHHHHHHHHTCCSEEEEECSCTTTCCCCC---HHHHHHHHHHT-TCEEEEECTTTCTTTCC----GG-
T ss_pred eCCC-------CHHHHHHhhccCCcEEEEeCCCCCCCcccC---HHHHHHHHHHc-CCEEEEECCCcccccCC----cc-
Confidence 9862 899999999989999999999999999998 89999999999 99999999999865431 11
Q ss_pred cCCCCCCceEEEeccChhccccccee-eEEEcCH-HHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHH
Q 014172 286 SLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPK-HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (429)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~~~~G~R~-G~v~~~~-~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~ 363 (429)
. .+.++++.|+||.++.+|.|+ ||+++++ ++++.+......++.+.+.+.+.++...++. +....+.
T Consensus 186 ~----~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~ 254 (386)
T 1cs1_A 186 A----LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRT-------LVPRMEL 254 (386)
T ss_dssp G----GTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT-------HHHHHHH
T ss_pred c----cCceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhcccH-------HHHHHHH
Confidence 1 356799999999999899997 9999986 8888888776655555777777776666542 3455566
Q ss_pred HHHHHHHHHHHhccCCCc
Q 014172 364 FRERRDFLVKSFGELEGV 381 (429)
Q Consensus 364 ~~~~r~~l~~~L~~l~g~ 381 (429)
..++++.+.+.|++++++
T Consensus 255 ~~~~~~~l~~~l~~~~~l 272 (386)
T 1cs1_A 255 AQRNAQAIVKYLQTQPLV 272 (386)
T ss_dssp HHHHHHHHHHHHTTCTTE
T ss_pred HHHHHHHHHHHHhcCCCe
Confidence 677788888888776544
No 179
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.95 E-value=2.5e-26 Score=228.08 Aligned_cols=216 Identities=16% Similarity=0.155 Sum_probs=167.7
Q ss_pred CCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHH----HHcCCEEEE
Q 014172 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVI 205 (429)
Q Consensus 130 ~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~ 205 (429)
+.+...++++.+++++ |. + +.++++++++++..++.+++++||+|+++.|+|.++...+ +..|++++.
T Consensus 63 ~~~~~~~l~~~la~~~----g~---~-~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~ 134 (398)
T 1gc0_A 63 SNPTLNLLEARMASLE----GG---E-AGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRH 134 (398)
T ss_dssp CCHHHHHHHHHHHHHH----TC---S-EEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEE
T ss_pred CChHHHHHHHHHHHHh----CC---C-cEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEE
Confidence 3344556777777665 42 2 5566666689999999999999999999999999988765 678999999
Q ss_pred ecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccc
Q 014172 206 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (429)
Q Consensus 206 v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~ 285 (429)
++. .|++++++.+++++++|++++|+||||.+++ +++|.++|++| |+++|+|++|..+.+.. ++
T Consensus 135 ~~~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~~~li~D~~~~~~~~~~----~~- 198 (398)
T 1gc0_A 135 VDM-------ADLQALEAAMTPATRVIYFESPANPNMHMAD---IAGVAKIARKH-GATVVVDNTYCTPYLQR----PL- 198 (398)
T ss_dssp ECT-------TCHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHGGG-TCEEEEECTTTHHHHCC----GG-
T ss_pred ECC-------CCHHHHHHhcCCCCeEEEEECCCCCCccccc---HHHHHHHHHHc-CCEEEEECCCcccccCC----ch-
Confidence 985 2899999999999999999999999999998 99999999999 99999999999765431 11
Q ss_pred cCCCCCCceEEEeccChhccccccee-eEEEcCHHHHH-HHHHHhhc-ccCCCchHHHHHHHHHHhcCCCChHHHHHHHH
Q 014172 286 SLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVA-ACNKIQSQ-FTSGASSISQKAGVAALGLGYAGGEVVSKMVK 362 (429)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~~~~G~R~-G~v~~~~~~~~-~l~~~~~~-~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~ 362 (429)
. .+.++++.|+||.++.+|+|+ ||++++++.++ .+...... ++.+.+.+.+.++...++. +....+
T Consensus 199 ~----~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~ 267 (398)
T 1gc0_A 199 E----LGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT-------LNLRMD 267 (398)
T ss_dssp G----GTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT-------HHHHHH
T ss_pred h----hCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhccCCCCCCHHHHHHHHhccch-------HHHHHH
Confidence 1 356699999999999999998 99999988766 55555444 4555777777777777753 334455
Q ss_pred HHHHHHHHHHHHhccCCC
Q 014172 363 AFRERRDFLVKSFGELEG 380 (429)
Q Consensus 363 ~~~~~r~~l~~~L~~l~g 380 (429)
...++++.+.+.|+++++
T Consensus 268 ~~~~~~~~l~~~L~~~~~ 285 (398)
T 1gc0_A 268 RHCANAQVLAEFLARQPQ 285 (398)
T ss_dssp HHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHHhcCCC
Confidence 556666667777766543
No 180
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.95 E-value=8.3e-26 Score=229.45 Aligned_cols=317 Identities=14% Similarity=0.107 Sum_probs=218.4
Q ss_pred cCCCeEEcCCC--CCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAG--EPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g--~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.+||+..| ...++. ||++.+++.+++.+..+.+ ...+..+.+.++++++.+.++. +.++|++++|+++++.
T Consensus 52 ~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~-~~~~~~~~~~~la~~l~~~~~~--~~~~v~~~~sGseA~~ 128 (476)
T 3i5t_A 52 DGRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLPYAS-PWYMATSPAARLAEKIATLTPG--DLNRIFFTTGGSTAVD 128 (476)
T ss_dssp TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCC-TTTCBCHHHHHHHHHHHTTSST--TCCEEEEESSHHHHHH
T ss_pred CCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCcc-cCccCCHHHHHHHHHHHhcCCC--CcCEEEEeCchHHHHH
Confidence 57789999988 455554 8999999999987643322 2256788999999999987763 4579999999999999
Q ss_pred HHHHHhcC--------CCCEEEEcCCCCCChHHHHHHcCCE-------------EEEec--CCCCCCCCCC--------H
Q 014172 170 QAVLAVCS--------PGDEVIIPAPFWVSYPEMARIADAT-------------PVILP--TRISENFLLD--------P 218 (429)
Q Consensus 170 ~~l~~l~~--------~gd~Vlv~~p~y~~~~~~~~~~g~~-------------~~~v~--~~~~~~~~~d--------~ 218 (429)
.+++.++. .++.|++.+|+|.++...+...+.. +..++ ....+ +..| +
T Consensus 129 ~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~ 207 (476)
T 3i5t_A 129 SALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHA-GNRSQEAFLDDLV 207 (476)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGC-TTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCccccc-CCCchHHHHHHHH
Confidence 99998863 3579999999999988766654332 22333 21111 1122 7
Q ss_pred HHHHhhcc----cCCcEEEEcCCCCCccC-CCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccc-cCCCCCC
Q 014172 219 KVLESKLT----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA-SLPGMWE 292 (429)
Q Consensus 219 e~l~~~l~----~~~~~i~l~~p~NPtG~-~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~-~~~~~~~ 292 (429)
++|++.+. +++++|+++.++|++|. +++++++++|.++|++| |+++|+||+|.+|.+.|.. ..+. .+.. ..
T Consensus 208 ~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~-gillI~DEv~~g~gr~G~~-~~~~~~~~v-~p 284 (476)
T 3i5t_A 208 QEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKH-DILYISDEVVTGFGRCGEW-FASEKVFGV-VP 284 (476)
T ss_dssp HHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSS-CHHHHTTCC-CC
T ss_pred HHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEEecccCCccccCc-eeeecccCC-Cc
Confidence 88888886 45677777877888885 88899999999999999 9999999999987655532 1222 2211 11
Q ss_pred ceEEEeccChhccccc-ceeeEEEcCHHHHHHHHHH-------hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 014172 293 RTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 364 (429)
Q Consensus 293 ~~i~~~S~SK~~~~~G-~R~G~v~~~~~~~~~l~~~-------~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~ 364 (429)
. +.+|||.++ .| +|+||+++++++++.+... ....+++.+++++.++.++|+. .++ +++.+.+
T Consensus 285 d---i~t~sK~l~-~G~~plg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~---~~~--~~~~~~~ 355 (476)
T 3i5t_A 285 D---IITFAKGVT-SGYVPLGGLAISEAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIEL---MER--EGIVDQA 355 (476)
T ss_dssp S---EEEECGGGG-TTSSCCEEEEECHHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHH---HHH--TTHHHHH
T ss_pred c---hhhhhhhhc-CCCcCeEEEEECHHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHH---HHh--HHHHHHH
Confidence 2 336899998 68 9999999999999888653 2335667899999999999974 121 2445555
Q ss_pred HHHHHHHHHHhcc---CCCceeecCCceEEEEEecCCccCCcccCCCC-CCChHHHHHHHHHhCCeec
Q 014172 365 RERRDFLVKSFGE---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK-IENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 365 ~~~r~~l~~~L~~---l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~Ll~~~gV~v 428 (429)
+++.+++.+.|++ ++.+..+++.|.| +++++...... ...+.. .....+++++|+++ ||.+
T Consensus 356 ~~~~~~l~~~L~~l~~~~~v~~v~~~G~~-~~i~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~-Gv~v 420 (476)
T 3i5t_A 356 REMADYFAAALASLRDLPGVAETRSVGLV-GCVQCLLDPTR-ADGTAEDKAFTLKIDERCFEL-GLIV 420 (476)
T ss_dssp HHHHHHHHHHHHTTTTSTTEEEEEEETTE-EEEEECCC------CCHHHHHHHHHHHHHHHHT-TEEC
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEecCce-eEEEEecCccc-cccccchhHHHHHHHHHHHHC-CCEE
Confidence 6666666666654 4556666677765 56666531000 000000 00156788888876 8875
No 181
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.95 E-value=4.3e-26 Score=225.93 Aligned_cols=217 Identities=14% Similarity=0.118 Sum_probs=175.8
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHH----HHcCCEEEEec
Q 014172 132 AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVILP 207 (429)
Q Consensus 132 ~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~ 207 (429)
+...+|++.+++++ | .+++++++|+++++..++.+++++||+|+++.|+|.++...+ +..|.+++.++
T Consensus 66 ~~~~~l~~~la~~~----g----~~~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~ 137 (392)
T 3qhx_A 66 PTRTALEAALAAVE----D----AAFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVA 137 (392)
T ss_dssp HHHHHHHHHHHHHT----T----CSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred hHHHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeC
Confidence 34456777777764 3 247899999999999999999999999999999999877666 67899999998
Q ss_pred CCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccC
Q 014172 208 TRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL 287 (429)
Q Consensus 208 ~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~ 287 (429)
.+ |++.+++++++++++|++++|+||||.+.+ +++|.++|++| |+++|+|++|....... ++ .
T Consensus 138 ~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~-g~~li~D~~~~~~~~~~----~~-~- 200 (392)
T 3qhx_A 138 LA-------DLDAVRAAIRPTTRLIWVETPTNPLLSIAD---IAGIAQLGADS-SAKVLVDNTFASPALQQ----PL-S- 200 (392)
T ss_dssp TT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHH-TCEEEEECTTTCTTTCC----GG-G-
T ss_pred CC-------CHHHHHHhhCCCCeEEEEECCCCCCcEEec---HHHHHHHHHHc-CCEEEEECCCcccccCC----hH-H-
Confidence 63 899999999999999999999999999999 99999999999 99999999998542211 11 1
Q ss_pred CCCCCceEEEeccChhccccc-ceeeEEEcC-HHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 014172 288 PGMWERTLTVNGFSKAFAMTG-WRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFR 365 (429)
Q Consensus 288 ~~~~~~~i~~~S~SK~~~~~G-~R~G~v~~~-~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~ 365 (429)
.+.++++.|+||.++.+| .|+||++++ +++++.+.......+.+.+.+.+.++...++. +....++..
T Consensus 201 ---~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-------l~~~~~~~~ 270 (392)
T 3qhx_A 201 ---LGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAYLTMRGLKT-------LVLRMQRHS 270 (392)
T ss_dssp ---GTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-------HHHHHHHHH
T ss_pred ---hCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH-------HHHHHHHHH
Confidence 355699999999999777 799999997 68888888777767777888888777777653 334456667
Q ss_pred HHHHHHHHHhccCCCcee
Q 014172 366 ERRDFLVKSFGELEGVKM 383 (429)
Q Consensus 366 ~~r~~l~~~L~~l~g~~~ 383 (429)
++++.+.+.|++.+++..
T Consensus 271 ~~~~~l~~~L~~~~~v~~ 288 (392)
T 3qhx_A 271 ENAAAVAEFLAEHPAIST 288 (392)
T ss_dssp HHHHHHHHHHHTCTTEEE
T ss_pred HHHHHHHHHHhcCCCcce
Confidence 777788888888766643
No 182
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.95 E-value=6.6e-27 Score=234.48 Aligned_cols=313 Identities=12% Similarity=0.096 Sum_probs=205.3
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.++|+..|. +.++. |+++.+++.+++.+....+.+.....+|++++++++ + .+++|++|+|+++++.
T Consensus 51 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~---~~~~v~~~~~Gsea~~ 123 (429)
T 3k28_A 51 DGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGAPTEIENKLAKLVIERV----P---SIEIVRMVNSGTEATM 123 (429)
T ss_dssp TCCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHHS----T---TCSEEEEESSHHHHHH
T ss_pred CCCEEEECCCChhhcccCCCCHHHHHHHHHHHhhCcCcCCCCHHHHHHHHHHHHhC----C---CCCEEEEeCChHHHHH
Confidence 577899999887 44554 899999999998775443445555566766666654 2 4689999999999999
Q ss_pred HHHHHhcC--CCCEEEEcCCCCCChHHHHHH-cCCEEEEecCCCCCCCC------------CCHHHHHhhcc---cCCcE
Q 014172 170 QAVLAVCS--PGDEVIIPAPFWVSYPEMARI-ADATPVILPTRISENFL------------LDPKVLESKLT---EKSRL 231 (429)
Q Consensus 170 ~~l~~l~~--~gd~Vlv~~p~y~~~~~~~~~-~g~~~~~v~~~~~~~~~------------~d~e~l~~~l~---~~~~~ 231 (429)
.+++.+.. +++.|++.+|+|+++...+.. .|..+..++.....++. -|++.++++++ +++++
T Consensus 124 ~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~ 203 (429)
T 3k28_A 124 SALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIAC 203 (429)
T ss_dssp HHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEE
T ss_pred HHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEE
Confidence 99988764 568999999999876543322 22211111111111100 18999999886 34555
Q ss_pred EEEcCCCCCccCCC-CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccce
Q 014172 232 LILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWR 310 (429)
Q Consensus 232 i~l~~p~NPtG~~~-~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R 310 (429)
|+++.++|++|.+. +++++++|.++|++| |+++|+||+|.++ +.+.. .....+ +....+.||||.++ .|+|
T Consensus 204 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~-~~~li~DEv~~g~-~~g~~-~~~~~~----~~~~di~t~sK~~~-~G~~ 275 (429)
T 3k28_A 204 VIVEPVAGNMGVVPPQPGFLEGLREVTEQN-GALLIFDEVMTGF-RVAYN-CGQGYY----GVTPDLTCLGKVIG-GGLP 275 (429)
T ss_dssp EEECSSBCTTSCBCCCTTHHHHHHHHHHHH-TCEEEEECTTTTT-TSSTT-HHHHHH----TCCCSEEEECGGGG-TTSC
T ss_pred EEEcCCCCCCCcccCCHHHHHHHHHHHHHc-CCEEEEecccccc-ccCcc-hHHHHh----CCCCceehhhhhhc-CCCC
Confidence 55555556666555 678899999999999 9999999999987 54421 111111 11122457999998 6999
Q ss_pred eeEEEcCHHHHHHHHHHh---hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC----CCcee
Q 014172 311 LGYIAGPKHFVAACNKIQ---SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL----EGVKM 383 (429)
Q Consensus 311 ~G~v~~~~~~~~~l~~~~---~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l----~g~~~ 383 (429)
+||+++++++++.+.... ...+++.+.+++.++.++|+. .+ +++.+.++++++++.+.|+++ +.+..
T Consensus 276 iG~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~---~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 349 (429)
T 3k28_A 276 VGAYGGKAEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQ---LT---PESYVEFERKAEMLEAGLRKAAEKHGIPHH 349 (429)
T ss_dssp CEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHT---CC---HHHHHHHHHHHHHHHHHHHHHHHHTTCCCE
T ss_pred eEEEEEcHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHH---HH---HHHHHHHHHHHHHHHHHHHHHHhhCCCCEE
Confidence 999999999988775432 233567899999999999986 22 466677777777777777653 44444
Q ss_pred ecCCceEEEEEecCCccCCc--ccCCCCCCChHHHHHHHHHhCCeec
Q 014172 384 SEPQGAFYLFIDFSTYYGSE--AEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 384 ~~p~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.++.|.| +++.+....... ...........+++++|+++ ||.+
T Consensus 350 ~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v 394 (429)
T 3k28_A 350 INRAGSM-IGIFFTDEPVINYDAAKSSNLQFFAAYYREMVEQ-GVFL 394 (429)
T ss_dssp EEEETTE-EEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHHT-TEEC
T ss_pred EEeeccE-EEEEEecCCcccccccccccHHHHHHHHHHHHHC-CeEE
Confidence 5555655 556553210000 00000001246888888876 8876
No 183
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.94 E-value=4.7e-26 Score=231.00 Aligned_cols=319 Identities=13% Similarity=0.095 Sum_probs=215.3
Q ss_pred cCCCeEEcCCC--CCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAG--EPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g--~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.+||+..| ...++. ||.+.+++.+++.+..+.|+...+..+.+.++++++.+..+ .+.++|++++|+++++.
T Consensus 53 ~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~lae~l~~~~~--~~~~~v~~~~sGseA~~ 130 (472)
T 3hmu_A 53 EGEEILDAMAGLWCVNIGYGRDELAEVAARQMRELPYYNTFFKTTHVPAIALAQKLAELAP--GDLNHVFFAGGGSEAND 130 (472)
T ss_dssp TCCEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCSSSSEECHHHHHHHHHHHHHSC--TTEEEEEEESSHHHHHH
T ss_pred CCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCHHHHHH
Confidence 57789999988 455554 79999999999887544555555567788888888887765 35679999999999999
Q ss_pred HHHHHhcC--------CCCEEEEcCCCCCChHHHHHHcCC------------EEEEecCCC--C-CCCCCC--------H
Q 014172 170 QAVLAVCS--------PGDEVIIPAPFWVSYPEMARIADA------------TPVILPTRI--S-ENFLLD--------P 218 (429)
Q Consensus 170 ~~l~~l~~--------~gd~Vlv~~p~y~~~~~~~~~~g~------------~~~~v~~~~--~-~~~~~d--------~ 218 (429)
.+++.+.. +++.|++.+|+|.++...+...+. .++.++... . +++ .| +
T Consensus 131 ~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~ 209 (472)
T 3hmu_A 131 TNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLARA 209 (472)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHHHH
Confidence 99999874 468999999999998766655543 244454321 0 111 24 7
Q ss_pred HHHHhhcc----cCCcEEEEcCCCCCccCCC-CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCc
Q 014172 219 KVLESKLT----EKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 293 (429)
Q Consensus 219 e~l~~~l~----~~~~~i~l~~p~NPtG~~~-~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~ 293 (429)
+.|++.++ +++++|+++.++|++|.+. +++.+++|.++|++| |+++|+||+|.+|.+.|.. .....+.. ...
T Consensus 210 ~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~-gillI~DEv~~gfgr~G~~-~a~~~~~v-~pd 286 (472)
T 3hmu_A 210 RELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKY-DILLIADEVICGFGRTGNW-FGTQTMGI-RPH 286 (472)
T ss_dssp HHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSS-CHHHHHTC-CCS
T ss_pred HHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEEccccCCcccCcc-chhHHhCC-CCc
Confidence 88888876 3456666666677888755 888999999999999 9999999999987555431 11111111 111
Q ss_pred eEEEeccChhcccccceeeEEEcCHHHHHHHHH--HhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHH-HHHHH
Q 014172 294 TLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK--IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFR-ERRDF 370 (429)
Q Consensus 294 ~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~--~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~-~~r~~ 370 (429)
+.+|||.++..|+|+||+++++++++.+.. .....+++.+.+++.++.++|+. .++ +.+.+.++ ++.++
T Consensus 287 ---i~t~sK~l~gg~~plG~v~~~~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~---~~~--~~~~~~~~~~~~~~ 358 (472)
T 3hmu_A 287 ---IMTIAKGLSSGYAPIGGSIVCDEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRI---LEE--ENILDHVRNVAAPY 358 (472)
T ss_dssp ---EEEECGGGTTTSSCCEEEEEEHHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHH---HHH--TTHHHHHHHTHHHH
T ss_pred ---eeeechhhhcCCcceEEEEECHHHHHhcccCCccccCCCCCCHHHHHHHHHHHHH---HHH--hHHHHHHHHHHHHH
Confidence 346899998445999999999999998832 12334567889999999999874 111 23444444 55555
Q ss_pred HHHHhcc---CCCceeecCCceEEEEEecCCccCCcccCCCC--CCChHHHHHHHHHhCCeec
Q 014172 371 LVKSFGE---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK--IENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 371 l~~~L~~---l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~Ll~~~gV~v 428 (429)
+.+.|++ ++++..+++.|.| +++.+..... ....+.. .....++++.|+++ ||.+
T Consensus 359 l~~~L~~l~~~~~v~~vr~~G~~-~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~-Gv~v 418 (472)
T 3hmu_A 359 LKEKWEALTDHPLVGEAKIVGMM-ASIALTPNKA-SRAKFASEPGTIGYICRERCFAN-NLIM 418 (472)
T ss_dssp HHHHHHGGGGSTTEEEEEEETTE-EEEEECSCGG-GTCCBSSCTTHHHHHHHHHHHHT-TBCC
T ss_pred HHHHHHHHhcCCCeEEEEecCce-EEEEEecCcc-ccccccchhHHHHHHHHHHHHHC-CcEE
Confidence 5555544 4556666777766 5555542100 0000000 00156788888876 8875
No 184
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.94 E-value=1.4e-26 Score=234.46 Aligned_cols=296 Identities=11% Similarity=0.058 Sum_probs=207.2
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHH----cCCC----CCCCC-CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChH
Q 014172 95 VSVIRLAAGEPDFDTPVLIAEAGINAIR----EGFT----RYTPN-AGTLELRSAICHKLKEENGLSYTPDQILVSNGAK 165 (429)
Q Consensus 95 ~~~i~L~~g~~~~~~p~~v~~a~~~~~~----~~~~----~Y~~~-~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~ 165 (429)
++.|.|+.+.... .|+.+.+++.+.+. .+.. .|.+. .-..++++.+++++ | .++++|++|+|++
T Consensus 66 ~~~iyld~~~~g~-~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~~v~~t~g~t 138 (465)
T 3e9k_A 66 ENAIYFLGNSLGL-QPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIV----G--ANEKEIALMNALT 138 (465)
T ss_dssp CBCEECBTTTSCC-EETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHH----T--CCGGGEEECSCHH
T ss_pred CCeEEecCCccCC-ChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHc----C--CCcCCEEEECCHH
Confidence 4688998876542 34445444444332 1111 12111 12244666666554 5 4578999999999
Q ss_pred HHHHHHHHHhcCCCCE---EEEcCCCCCChHH----HHHHcCCEEE-----EecCCCCCCCCCCHHHHHhhcc---cCCc
Q 014172 166 QSILQAVLAVCSPGDE---VIIPAPFWVSYPE----MARIADATPV-----ILPTRISENFLLDPKVLESKLT---EKSR 230 (429)
Q Consensus 166 ~al~~~l~~l~~~gd~---Vlv~~p~y~~~~~----~~~~~g~~~~-----~v~~~~~~~~~~d~e~l~~~l~---~~~~ 230 (429)
+++++++.+++++||. |+++.|+|+++.. .++..|++++ .++. ++++.+|+++|+++++ ++++
T Consensus 139 ~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~--~~~~~~d~~~l~~~i~~~~~~~~ 216 (465)
T 3e9k_A 139 VNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPR--EGEETLRIEDILEVIEKEGDSIA 216 (465)
T ss_dssp HHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCC--TTCSSCCHHHHHHHHHHHGGGEE
T ss_pred HHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecC--CCCCccCHHHHHHHHHhcCCCeE
Confidence 9999999999877654 9999999998544 6677898852 3343 2456789999999996 6789
Q ss_pred EEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccce
Q 014172 231 LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWR 310 (429)
Q Consensus 231 ~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R 310 (429)
+|++++|+||||.+++ +++|.++|++| |++||+|++|+. +..+..+.. .+.+++++|++|.++....+
T Consensus 217 lv~~~~~~n~tG~~~~---l~~i~~la~~~-g~~vi~D~a~~~----g~~~~~~~~----~~~D~~~~s~~K~l~~gp~~ 284 (465)
T 3e9k_A 217 VILFSGVHFYTGQHFN---IPAITKAGQAK-GCYVGFDLAHAV----GNVELYLHD----WGVDFACWCSYKYLNAGAGG 284 (465)
T ss_dssp EEEEESBCTTTCBBCC---HHHHHHHHHHT-TCEEEEECTTTT----TTSCCCHHH----HTCCEEEECSSSTTCCCTTC
T ss_pred EEEEeCcccCcceeec---HHHHHHHHHHc-CCEEEEEhhhhc----CCcCCchhh----cCCCEEEECcccccccCCCc
Confidence 9999999999999999 89999999999 999999999975 222222222 34568999999999422336
Q ss_pred eeEEEcCHHHHHHHHHHhhc-------------------------ccCCCchHHHHHHHHHHhcCCCChHH-HHHHHHHH
Q 014172 311 LGYIAGPKHFVAACNKIQSQ-------------------------FTSGASSISQKAGVAALGLGYAGGEV-VSKMVKAF 364 (429)
Q Consensus 311 ~G~v~~~~~~~~~l~~~~~~-------------------------~~~~~~~~~q~aa~~~l~~~~~~~~~-~~~~~~~~ 364 (429)
+|++++++++++.+...... ...+++.+...++.++++. ..++ ++++++++
T Consensus 285 ~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~---~~~~~~~~~~~~~ 361 (465)
T 3e9k_A 285 IAGAFIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEI---FKQATMKALRKKS 361 (465)
T ss_dssp CCEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHH---HHHHCHHHHHHHH
T ss_pred eEEEEEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHH---HHHcCHHHHHHHH
Confidence 89999988876544311100 0114566666666666664 2333 78899999
Q ss_pred HHHHHHHHHHhccC----------CCceeecCC----ceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 365 RERRDFLVKSFGEL----------EGVKMSEPQ----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 365 ~~~r~~l~~~L~~l----------~g~~~~~p~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+++++++.+.|+++ +|+++..|. .|.++++.++. +..+++++|.++ ||.+
T Consensus 362 ~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~-------------~~~~l~~~L~~~-Gi~v 425 (465)
T 3e9k_A 362 VLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSV-------------PNKDVFQELEKR-GVVC 425 (465)
T ss_dssp HHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECC-------------TTCCHHHHHHTT-TEEC
T ss_pred HHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecC-------------CHHHHHHHHHHC-CEEE
Confidence 99999999999885 688888765 25567788762 456788888766 8875
No 185
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.94 E-value=3.6e-26 Score=230.75 Aligned_cols=305 Identities=13% Similarity=0.106 Sum_probs=196.1
Q ss_pred cCCCeEEcCCCCC--CCC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGEP--DFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~~--~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.+|||+.|.+ +++ .|+.+.+++.+.+..+. .| .+..++++++++++.+.++ .+++|++|+|+++++.
T Consensus 55 ~g~~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~-~~---~~~~~~~~~la~~l~~~~~---~~~~v~~~~gg~eA~~ 127 (453)
T 2cy8_A 55 DGNVYLDFFGGHGALVLGHGHPRVNAAIAEALSHGV-QY---AASHPLEVRWAERIVAAFP---SIRKLRFTGSGTETTL 127 (453)
T ss_dssp TCCEEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTC-SS---CSSCHHHHHHHHHHHHHCT---TCSEEEEESCHHHHHH
T ss_pred CCCEEEECcccHhhcccCCCCHHHHHHHHHHHHhCC-CC---CCCCHHHHHHHHHHHhhCC---CCCEEEEeCCHHHHHH
Confidence 4667899999873 333 47899999999886532 33 2467899999999988765 5689999999999999
Q ss_pred HHHHH---hcCCCCEEEEcCCCCCChHHHHHH-----------cCCE------EEEecCCCCCCCCCCHHHHHhhcc---
Q 014172 170 QAVLA---VCSPGDEVIIPAPFWVSYPEMARI-----------ADAT------PVILPTRISENFLLDPKVLESKLT--- 226 (429)
Q Consensus 170 ~~l~~---l~~~gd~Vlv~~p~y~~~~~~~~~-----------~g~~------~~~v~~~~~~~~~~d~e~l~~~l~--- 226 (429)
.++++ +.++ +.|++.+|+|+++...+.. .|+. ++.++. .|++.|+++++
T Consensus 128 ~al~~ar~~~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~~ 199 (453)
T 2cy8_A 128 LALRVARAFTGR-RMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-------DDIEGMREVFANHG 199 (453)
T ss_dssp HHHHHHHHHHCC-CEEEEECC----------------------------CGGGEEEECT-------TCHHHHHHHHHHHG
T ss_pred HHHHHHHHhhCC-CEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-------CCHHHHHHHHHhcC
Confidence 99988 6654 6788888999876553322 1221 223332 38999999887
Q ss_pred cCCcEEEEcCCCCCccCCC-CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcc
Q 014172 227 EKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 305 (429)
Q Consensus 227 ~~~~~i~l~~p~NPtG~~~-~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 305 (429)
+++++|+++..+||||.++ +++++++|.++|++| |+++|+||+|.++ +.+. ...+..+.. ... +.||||.++
T Consensus 200 ~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~-g~~lI~DEv~~g~-~~g~-~~~~~~~~~-~~d---i~s~sK~l~ 272 (453)
T 2cy8_A 200 SDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQY-GALFILDEVISGF-RVGN-HGMQALLDV-QPD---LTCLAKASA 272 (453)
T ss_dssp GGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHT-TCEEEEECTTTTT-TTCT-THHHHHHTC-CCS---EEEEEGGGG
T ss_pred CCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEecCcccc-ccCc-hhhhHHhCC-CCc---EEEEChhhh
Confidence 3556655444457899765 799999999999999 9999999999987 4332 111111111 111 348999999
Q ss_pred cccceeeEEEcCHHHHHHHHH-----HhhcccCCCchHHHHHHHHHHhc-CCCChHHHHHHHHHHHHHHHHHHHHhccC-
Q 014172 306 MTGWRLGYIAGPKHFVAACNK-----IQSQFTSGASSISQKAGVAALGL-GYAGGEVVSKMVKAFRERRDFLVKSFGEL- 378 (429)
Q Consensus 306 ~~G~R~G~v~~~~~~~~~l~~-----~~~~~~~~~~~~~q~aa~~~l~~-~~~~~~~~~~~~~~~~~~r~~l~~~L~~l- 378 (429)
+|+|+||+++++++++.+.. .....+++.+.+++.++.++|+. . .+++.++++++++++.+.|+++
T Consensus 273 -~G~~~G~v~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~------~~~~~~~~~~~~~~l~~~L~~~~ 345 (453)
T 2cy8_A 273 -GGLPGGILGGREDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL------EDDVCAKINDLGQFAREAMNHLF 345 (453)
T ss_dssp -TTSSCEEEEECHHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH------HTTHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCcceEEEechHHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh------hhhHHHHHHHHHHHHHHHHHHHH
Confidence 69999999999998877654 11223456788889888888863 1 1234556666777777776653
Q ss_pred ---CCceeecCCceEEEEEecCC-----c--cCCcccCCC-CCCChHHHHHHHHHhCCeec
Q 014172 379 ---EGVKMSEPQGAFYLFIDFST-----Y--YGSEAEGFG-KIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 379 ---~g~~~~~p~~~~~~~~~l~~-----~--~~~~~~~~~-~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.....++.|. |+|++++. . ......... ...+..+++++|+++ ||.+
T Consensus 346 ~~~~~~~~~~~~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-Gv~v 404 (453)
T 2cy8_A 346 ARKGLNWLAYGRFS-GFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILE-GVDI 404 (453)
T ss_dssp HHTTCCEEEECCTT-EEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHT-TEEC
T ss_pred hhCCCcEEEEEeee-EEEEEEeccccccccccccccccccccHHHHHHHHHHHHHC-CeEE
Confidence 22233445554 58888863 0 000000000 001256899998875 9875
No 186
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.94 E-value=6.2e-26 Score=219.15 Aligned_cols=185 Identities=14% Similarity=0.119 Sum_probs=152.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHH----HHcCCEEEEecCCCC
Q 014172 136 ELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTRIS 211 (429)
Q Consensus 136 ~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~~~ 211 (429)
+|+++++++++ . ++.+ +++++++++..++.+++++||+|+++.|+|.++...+ +..|++++.++.
T Consensus 2 ~l~~~la~~~g------~-~~~i-~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--- 70 (331)
T 1pff_A 2 ALEGKIAKLEH------A-EACA-ATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM--- 70 (331)
T ss_dssp HHHHHHHHHHT------C-SEEE-EESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT---
T ss_pred hHHHHHHHHhC------C-CeEE-EeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC---
Confidence 57888888873 2 2444 4555589999999999999999999999999987665 458999999985
Q ss_pred CCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHh-CCCeEEEEccCCcccccCCCCCCccccCCCC
Q 014172 212 ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK-HPRLLVLSDEIYEHIIYAPATHTSFASLPGM 290 (429)
Q Consensus 212 ~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~-~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~ 290 (429)
.|++.+++.+++++++|++++|+||||.+++ +++|.++|++ | |+++|+|++|..+.+.. ++ .
T Consensus 71 ----~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~-~~~li~D~a~~~~~~~~----~~-----~ 133 (331)
T 1pff_A 71 ----AVPGNIEKHLKPNTRIVYFETPANPTLKVID---IEDAVKQARKQK-DILVIVDNTFASPILTN----PL-----D 133 (331)
T ss_dssp ----TSTTHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSS-SCEEEEECTTTHHHHCC----GG-----G
T ss_pred ----CCHHHHHHhhcCCCeEEEEECCCCCcCcccC---HHHHHHHHhhhc-CCEEEEECCCcccccCC----hh-----h
Confidence 3789999999989999999999999999998 9999999999 9 99999999998754421 11 1
Q ss_pred CCceEEEeccChhcccccce-eeEEEcCH-HHHHHHHHHhhc-ccCCCchHHHHHHHHHHh
Q 014172 291 WERTLTVNGFSKAFAMTGWR-LGYIAGPK-HFVAACNKIQSQ-FTSGASSISQKAGVAALG 348 (429)
Q Consensus 291 ~~~~i~~~S~SK~~~~~G~R-~G~v~~~~-~~~~~l~~~~~~-~~~~~~~~~q~aa~~~l~ 348 (429)
.+.++++.|+||.++.+|.| +||+++++ ++++.+...... ++.+.+.+.+.++...++
T Consensus 134 ~~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 194 (331)
T 1pff_A 134 LGVDIVVHSATKYINGHTDVVAGLVCSRADIIAKVKSQGIKDITGAIISPHDAWLITRGTL 194 (331)
T ss_dssp GTCSEEEEETTTTTSSSSSCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHH
T ss_pred cCCcEEEEECccccCCCCCceEEEEEeCcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcc
Confidence 36779999999999989999 89999998 899888876665 555677778777666665
No 187
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.94 E-value=6.5e-25 Score=218.89 Aligned_cols=241 Identities=18% Similarity=0.183 Sum_probs=176.4
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCCCC--CCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEE
Q 014172 106 DFDTPVLIAEAGINAIREGFTRYTPN--AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVI 183 (429)
Q Consensus 106 ~~~~p~~v~~a~~~~~~~~~~~Y~~~--~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vl 183 (429)
+++.|+.+.+++. ....+.|+.. ....++++.+++++ | .+++++|+|+++++..++.+++++||+|+
T Consensus 31 ~~~~~~~~~~~~~---~~~~~~y~~~~~~~~~~l~~~la~~~----g----~~~~~~~~~gt~a~~~al~~l~~~gd~vi 99 (412)
T 2cb1_A 31 GFKTLEEGQERFA---TGEGYVYARQKDPTAKALEERLKALE----G----ALEAVVLASGQAATFAALLALLRPGDEVV 99 (412)
T ss_dssp CCSSHHHHHHHHH---HCCSCSBTTTCCHHHHHHHHHHHHHH----T----CSEEEEESSHHHHHHHHHHTTCCTTCEEE
T ss_pred ecCChHHHHHHhc---cccCcCcCCCCChHHHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHhCCCCEEE
Confidence 3455666666653 3344566543 34567777777775 3 24899999999999999999999999999
Q ss_pred EcCCCCCChHHH----HHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHh
Q 014172 184 IPAPFWVSYPEM----ARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK 259 (429)
Q Consensus 184 v~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~ 259 (429)
++.|+|.++... ++..|++++.++. |+++|++++++++++|++++|+||||.+++ +++|.++|++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~l~~~ 168 (412)
T 2cb1_A 100 AAKGLFGQTIGLFGQVLSLMGVTVRYVDP--------EPEAVREALSAKTRAVFVETVANPALLVPD---LEALATLAEE 168 (412)
T ss_dssp EETTCCHHHHHHHHHTTTTTTCEEEEECS--------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHH
T ss_pred EeCCCchhHHHHHHHHHHHcCCEEEEECC--------CHHHHHHHhccCCeEEEEeCCCCCCccccc---HHHHHHHHHH
Confidence 999999876554 3457999999975 489999999999999999999999999998 9999999999
Q ss_pred CCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCH---------------------
Q 014172 260 HPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK--------------------- 318 (429)
Q Consensus 260 ~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~--------------------- 318 (429)
| |+++|+|++|..+.+.. .+. ..+.++++.|+||.++.+|+|+||+++.+
T Consensus 169 ~-~~~li~D~~~~~~~~~~---~~~-----~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~ 239 (412)
T 2cb1_A 169 A-GVALVVDNTFGAAGALC---RPL-----AWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIP 239 (412)
T ss_dssp H-TCEEEEECGGGTTTTSC---CGG-----GGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------
T ss_pred c-CCEEEEECCCccccccC---Ccc-----ccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccch
Confidence 9 99999999998752111 111 13567999999999988999999988543
Q ss_pred -------HHHHHHHHHh-hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceee
Q 014172 319 -------HFVAACNKIQ-SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (429)
Q Consensus 319 -------~~~~~l~~~~-~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~ 384 (429)
++.+.++... ...+.+.+.....++...++. +....++..++.+.+.+.|.+.+++..+
T Consensus 240 ~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~-------l~~~~~~~~~~~~~l~~~L~~~~~v~~v 306 (412)
T 2cb1_A 240 WEALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLET-------VALRVARMSETARFLAERLQGHPKVKAL 306 (412)
T ss_dssp HHHHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGG-------HHHHHHHHHHHHHHHHHHHHTCTTCSEE
T ss_pred hhccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCch-------HHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence 3444444432 222223344444433333332 3445556677888899999988888743
No 188
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.94 E-value=4.3e-26 Score=228.33 Aligned_cols=311 Identities=14% Similarity=0.136 Sum_probs=201.7
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.+||+..|. +.++. |+.+.+++.+.+.+.. .|+. ..+++.++++++.+.++ .+++|++|+|+++++.
T Consensus 50 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~---~~~~~~~la~~l~~~~~---~~~~v~~~~ggsea~~ 122 (427)
T 3fq8_A 50 DGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGT-SFGA---PCALENVLAEMVNDAVP---SIEMVRFVNSGTEACM 122 (427)
T ss_dssp TSCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCS-CCSS---CCHHHHHHHHHHHHHST---TCSEEEEESSHHHHHH
T ss_pred CCCEEEECCCchhhhccCCCCHHHHHHHHHHHHhCC-CcCC---CCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHHHH
Confidence 477899999887 34443 8999999999886642 3432 45778888888887766 5789999999999999
Q ss_pred HHHHHhc--CCCCEEEEcCCCCCChHHHHHHc-CC-------------------EEEEecCCCCCCCCCCHHHHHhhccc
Q 014172 170 QAVLAVC--SPGDEVIIPAPFWVSYPEMARIA-DA-------------------TPVILPTRISENFLLDPKVLESKLTE 227 (429)
Q Consensus 170 ~~l~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-g~-------------------~~~~v~~~~~~~~~~d~e~l~~~l~~ 227 (429)
.+++... ..++.|++.+|+|+++...+... |. .++.++.+ |+++|++++++
T Consensus 123 ~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------d~~~le~~l~~ 195 (427)
T 3fq8_A 123 AVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYN-------DLEAVKALFAE 195 (427)
T ss_dssp HHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETT-------CHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCC-------CHHHHHHHHHh
Confidence 9985432 23578999999998754332222 11 12333321 89999998875
Q ss_pred ---CCcEEEEcCCCCCccCCCC-HHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChh
Q 014172 228 ---KSRLLILCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKA 303 (429)
Q Consensus 228 ---~~~~i~l~~p~NPtG~~~~-~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 303 (429)
++++|+++.++|++|.+.+ .+++++|.++|++| |+++|+||+|.++ +.+.. ....... ....+.||||.
T Consensus 196 ~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~-~~~li~DEv~~g~-~~g~~-~~~~~~~----~~~di~t~sK~ 268 (427)
T 3fq8_A 196 NPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEH-DALLVFDEVITGF-RIAYG-GVQEKFG----VTPDLTTLGKI 268 (427)
T ss_dssp STTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHT-TCEEEEECTTTBT-TTBTT-HHHHHTT----CCCSEEEECGG
T ss_pred CCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEecccccc-ccCcc-hhhHhcC----CCCChhhhhhh
Confidence 5667777777788887776 55699999999999 9999999999987 44421 1111111 11125689999
Q ss_pred cccccceeeEEEcCHHHHHHHHHHh---hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCC
Q 014172 304 FAMTGWRLGYIAGPKHFVAACNKIQ---SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG 380 (429)
Q Consensus 304 ~~~~G~R~G~v~~~~~~~~~l~~~~---~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g 380 (429)
++ +|+|+||+++++++++.+.... ...+++.+.+++.++.++|+... .++..++.++..+..++.+.+.+..+ +
T Consensus 269 ~~-~G~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~-~ 345 (427)
T 3fq8_A 269 IG-GGLPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLR-QPGTYEYLDQITKRLSDGLLAIAQET-G 345 (427)
T ss_dssp GG-TTSSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHT-STTHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred hh-CCcceEEEEEcHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHHhC-C
Confidence 99 8999999999999988876432 23344568899999998887421 12333333333333333333333333 3
Q ss_pred ceeecCCceEEEEEecCCccCCc--ccCCCCCCChHHHHHHHHHhCCeec
Q 014172 381 VKMSEPQGAFYLFIDFSTYYGSE--AEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 381 ~~~~~p~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+....+..|+++|+.++...... .-.........++++.|+++ ||.+
T Consensus 346 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-Gi~v 394 (427)
T 3fq8_A 346 HAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQ-GIYL 394 (427)
T ss_dssp CCCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHT-TEEC
T ss_pred CCeEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHHHHC-CcEE
Confidence 32233445666888886420000 00000000145788888876 8876
No 189
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.94 E-value=7.8e-26 Score=224.31 Aligned_cols=287 Identities=12% Similarity=0.045 Sum_probs=198.3
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHc--CCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEE-ecChHHHHHHHH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIRE--GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILV-SNGAKQSILQAV 172 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~--~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~-t~G~~~al~~~l 172 (429)
.+++++.|. .++|+.+++++.+.... +...+++ ...++.+.+.+++.+.+|.+ ++++|++ |+|+++++.+++
T Consensus 40 ~~~~~~~~~--~~~~~~v~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~~~la~~~g~~-~~~~i~~~t~g~t~al~~~~ 114 (398)
T 2fyf_A 40 RDGRFGSGP--SKVRLEQLQTLTTTAAALFGTSHRQA--PVKNLVGRVRSGLAELFSLP-DGYEVILGNGGATAFWDAAA 114 (398)
T ss_dssp SSCBCCSSS--CCCCHHHHHGGGTTTTTTTTSCTTSH--HHHHHHHHHHHHHHHHTTCC-TTCEEEEEETCHHHHHHHHH
T ss_pred CCccccCCC--CCCCHHHHHHHhhcCCCccCcCcCCH--HHHHHHHHHHHHHHHHhCCC-CCceEEEeCCchhHHHHHHH
Confidence 466776553 35678888888762101 1112222 22345666777777777754 3578998 999999999999
Q ss_pred HHhcCCCCEEEEcCCCCCC-hHHHHHHc--CCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHH
Q 014172 173 LAVCSPGDEVIIPAPFWVS-YPEMARIA--DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNL 249 (429)
Q Consensus 173 ~~l~~~gd~Vlv~~p~y~~-~~~~~~~~--g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~ 249 (429)
++++++| .+++..+.|.. ....+... |++++.++++ +++..+. .+++++++|++++|+||||.+++.++
T Consensus 115 ~~l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~g~~~~~-----~i~~~~~~v~~~~~~nptG~~~~~~~ 186 (398)
T 2fyf_A 115 FGLIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSD--PGSAPEP-----QTDPSVDVIAWAHNETSTGVAVAVRR 186 (398)
T ss_dssp HHTCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECC--TTCCCCC-----CCCTTCSEEEEESEETTTTEECCCCC
T ss_pred HHhcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecC--CCCCCCc-----cccCCCCEEEEeCcCCCcceecchHH
Confidence 9999887 22232222211 12245556 8888889876 3333332 25678999999999999999999555
Q ss_pred HHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHh-
Q 014172 250 LDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ- 328 (429)
Q Consensus 250 l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~- 328 (429)
+.++ + |+++|+|++|..+.. ...+ .+..+++.|+||.++++| ++||+++++++++.+.+..
T Consensus 187 i~~~------~-~~~vivD~a~~~~~~----~~~~------~~~di~~~s~sK~~~~~g-g~g~l~~~~~~~~~l~~~~~ 248 (398)
T 2fyf_A 187 PEGS------D-DALVVIDATSGAGGL----PVDI------AETDAYYFAPQKNFASDG-GLWLAIMSPAALSRIEAIAA 248 (398)
T ss_dssp CTTC------C--CEEEEECTTTTTTS----CCCG------GGCSEEEECTTSTTCSCS-SEEEEEECHHHHHHHHHHHH
T ss_pred hhhh------c-CCeEEEEeccccCCc----ccCc------ccCcEEEEecCcccCCCC-ceEEEEECHHHHHHhhcccc
Confidence 5443 7 999999999986431 1111 124588999999999775 6999999999988775321
Q ss_pred --------------------hcccCCCchHHHHHHHHHHhcCCCChHH--HHHHHHHHHHHHHHHHHHhccCCCceeec-
Q 014172 329 --------------------SQFTSGASSISQKAGVAALGLGYAGGEV--VSKMVKAFRERRDFLVKSFGELEGVKMSE- 385 (429)
Q Consensus 329 --------------------~~~~~~~~~~~q~aa~~~l~~~~~~~~~--~~~~~~~~~~~r~~l~~~L~~l~g~~~~~- 385 (429)
.....+++...+.++.++++. ..+. +++++++++++++++.+.|++++|+++..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~---~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 325 (398)
T 2fyf_A 249 TGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDW---LVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVT 325 (398)
T ss_dssp TTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHH---HHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCC
T ss_pred cCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHH---HHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccC
Confidence 112234666677777777764 2333 78889999999999999999988888873
Q ss_pred -C--CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 386 -P--QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 386 -p--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
| .+++++|++++.. .+..+++++|.++ ||.+
T Consensus 326 ~~~~~~~~~~~~~~~~~-----------~~~~~l~~~L~~~-gI~v 359 (398)
T 2fyf_A 326 DPGLRSQVVGTIDFVDD-----------VDAGTVAKILRAN-GIVD 359 (398)
T ss_dssp SGGGBCSSEEEEEECTT-----------SCHHHHHHHHHHT-TCBC
T ss_pred ChhhcCCcEEEEECCCC-----------CCHHHHHHHHHHC-CcEE
Confidence 4 3566899998642 2688999999887 9876
No 190
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.94 E-value=3.2e-25 Score=218.49 Aligned_cols=284 Identities=12% Similarity=0.132 Sum_probs=205.3
Q ss_pred EcCCCCCCCCChHHHHHHHHHHHHcCCCC-CCCCCCCHHHHHHH-HHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh-
Q 014172 99 RLAAGEPDFDTPVLIAEAGINAIREGFTR-YTPNAGTLELRSAI-CHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV- 175 (429)
Q Consensus 99 ~L~~g~~~~~~p~~v~~a~~~~~~~~~~~-Y~~~~G~~~lr~~i-a~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l- 175 (429)
.+..|.|++++++++.+++.+.+.++... |+ +...+|++++ |++++ ..+++++++|+++++.+++.++
T Consensus 4 ~i~~~~p~~~~~~~i~~a~~~~~~~~~~~~~~--~~~~~l~~~~~a~~~g-------~~~~~v~~~sgt~al~~al~~l~ 74 (377)
T 3ju7_A 4 NIPFLRASTVPVIEYLDELKEIDASHIYTNYG--PINQRFEQTIMSGFFQ-------NRGAVTTVANATLGLMAAIQLKK 74 (377)
T ss_dssp CBCSCCCCCCCGGGGHHHHHHHHHHTCCSSSC--HHHHHHHHHHHHHTST-------TCSEEEEESCHHHHHHHHHHHHS
T ss_pred eeeccCCCCCCcHHHHHHHHHHHHcCCcccCC--HHHHHHHHHHHHHHhC-------CCCeEEEeCCHHHHHHHHHHHcC
Confidence 35677999999999999999999876533 33 3468899999 88852 1567899999999999999998
Q ss_pred cCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhc-ccC--CcEEEEcCCCCCccCCCCHHHHHH
Q 014172 176 CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL-TEK--SRLLILCSPSNPTGSVYPKNLLDE 252 (429)
Q Consensus 176 ~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l-~~~--~~~i~l~~p~NPtG~~~~~~~l~~ 252 (429)
+++||+|+++.|+|.++...++..|++++.+++++ +++.+|++++++++ +++ +|+|+ |+||+|.+.+ +++
T Consensus 75 ~~~Gd~Vi~~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~---~~~ 147 (377)
T 3ju7_A 75 RKKGKYALMPSFTFPATPLAAIWCGLEPYFIDISI-DDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMN---LEE 147 (377)
T ss_dssp CTTCCEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCC---CHH
T ss_pred CCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCC-ccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccC---HHH
Confidence 89999999999999999999999999999999875 45789999999988 666 88877 7889999999 888
Q ss_pred HHHHHHhCCCeEEEEccCCccccc-CCCCCCccccCCCCCCceEEEecc--ChhcccccceeeEEEc-CHHHHHHHHHHh
Q 014172 253 IARIVAKHPRLLVLSDEIYEHIIY-APATHTSFASLPGMWERTLTVNGF--SKAFAMTGWRLGYIAG-PKHFVAACNKIQ 328 (429)
Q Consensus 253 I~~~a~~~~~i~vi~Deay~~~~~-~~~~~~~~~~~~~~~~~~i~~~S~--SK~~~~~G~R~G~v~~-~~~~~~~l~~~~ 328 (429)
|.++|+ | |++||+|++|+.... .+. . +... ...+.+.|| +|.++ +| +.|++++ ++++++.++...
T Consensus 148 i~~la~-~-~~~vi~D~a~a~g~~~~~~---~---~g~~-~~d~~~~S~~~~K~l~-~g-~gG~~~~~~~~l~~~~~~~~ 216 (377)
T 3ju7_A 148 YEELEK-K-GVPVVVDAAPGFGLMNGGM---H---YGQD-FSGMIIYSFHATKPFG-IG-EGGLIYSKNEEDIQRIKRMG 216 (377)
T ss_dssp HHHHHH-T-TCCBEEECTTCTTCEETTE---E---TTTT-CSSEEEEECBTTSSSC-CB-SCEEEEESCHHHHHHHHHHT
T ss_pred HHHHHh-c-CCEEEEECCCccCCeECCE---e---ccCC-CCcEEEEECCCCCcCC-CC-CcEEEEECCHHHHHHHHHHH
Confidence 999999 9 999999999986432 211 1 1000 012556665 58887 45 6788776 567788777665
Q ss_pred hc------------ccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCc--eeecCCc--eE--
Q 014172 329 SQ------------FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV--KMSEPQG--AF-- 390 (429)
Q Consensus 329 ~~------------~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~--~~~~p~~--~~-- 390 (429)
.. +.+..+.+.+..+...++ .++...++.+++++.+.+.|++++++ .+.++.+ .+
T Consensus 217 ~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~-------~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 289 (377)
T 3ju7_A 217 NFGFDTNRECTMMGFNCKMSEYAAAIGIATMK-------KWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQ 289 (377)
T ss_dssp BTTBCTTSCBCSSCCBCCCCHHHHHHHHHHHH-------THHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCS
T ss_pred hcCCCCCCceeeccccCCCCHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEE
Confidence 42 234455555555555554 34556666677777778888777554 2222211 12
Q ss_pred EEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 391 YLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 391 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|+.+.+++. .+.+++.++|.++ ||.+
T Consensus 290 ~~~~~~~~~-----------~~~~~l~~~L~~~-gI~~ 315 (377)
T 3ju7_A 290 FMPILCPEE-----------VRNKQVIEDLKKQ-KIEA 315 (377)
T ss_dssp SEEEECCTT-----------SCHHHHHHHHHTT-TBCC
T ss_pred EEEEEeCCh-----------hhHHHHHHHHHHC-CCce
Confidence 234555432 2477888887665 8875
No 191
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.94 E-value=1.8e-24 Score=214.06 Aligned_cols=213 Identities=14% Similarity=0.144 Sum_probs=166.9
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH----HHHcCCEEEEe
Q 014172 131 NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADATPVIL 206 (429)
Q Consensus 131 ~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~v 206 (429)
.+...+|++++++++ |. +++++++++++++..++.+++++||+|+++.|+|.++... ++..|++++.+
T Consensus 58 ~~~~~~l~~~la~~~----g~----~~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v 129 (389)
T 3acz_A 58 NPTVEQFEEMVCSIE----GA----AGSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLI 129 (389)
T ss_dssp CHHHHHHHHHHHHHH----TC----SEEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred ChHHHHHHHHHHHHh----CC----CeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEE
Confidence 344567888888876 31 2667777788999999999999999999999999987655 57899999999
Q ss_pred cCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCcccc
Q 014172 207 PTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS 286 (429)
Q Consensus 207 ~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~ 286 (429)
+. .|++.+++++++++++|++++|+||||.+++ +++|.++|++| |+++|+|++|..+.+. .++ .
T Consensus 130 ~~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~-~~~livD~~~~~~~~~----~~~-~ 193 (389)
T 3acz_A 130 DT-------SDVEKVKAAWKPNTKMVYLESPANPTCKVSD---IKGIAVVCHER-GARLVVDATFTSPCFL----KPL-E 193 (389)
T ss_dssp CT-------TCHHHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHH-TCEEEEECTTTCTTTC----CGG-G
T ss_pred CC-------CCHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCCcccccc----Ccc-c
Confidence 86 3899999999999999999999999999999 99999999999 9999999999875432 111 1
Q ss_pred CCCCCCceEEEeccChhccccccee-eEEEcCH-HHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 014172 287 LPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPK-HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 364 (429)
Q Consensus 287 ~~~~~~~~i~~~S~SK~~~~~G~R~-G~v~~~~-~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~ 364 (429)
.+.++++.|+||.++.+|.|+ ||+++++ ++++.+......++.+.+...+.++...++. +....+..
T Consensus 194 ----~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-------l~~r~~~~ 262 (389)
T 3acz_A 194 ----LGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSLMAPMDAFLCARGMKT-------LPIRMQIH 262 (389)
T ss_dssp ----TTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-------HHHHHHHH
T ss_pred ----cCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcCccH-------HHHHHHHH
Confidence 356799999999999899998 9999998 8998888776556666777777777777753 22223333
Q ss_pred HHHHHHHHHHhccC
Q 014172 365 RERRDFLVKSFGEL 378 (429)
Q Consensus 365 ~~~r~~l~~~L~~l 378 (429)
.+++..+.+.|++.
T Consensus 263 ~~~~~~l~~~l~~~ 276 (389)
T 3acz_A 263 MENGLKVAKFLEQH 276 (389)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcC
Confidence 44444455555443
No 192
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.94 E-value=4.7e-26 Score=228.54 Aligned_cols=306 Identities=16% Similarity=0.141 Sum_probs=203.8
Q ss_pred cCCCeEEcCCCCC--CCC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGEP--DFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~~--~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.+|||+.|.+ .++ .|+.+.+++.+.+.++. .|+ +..++++++++++.+.++ .+++|++|+|+++++.
T Consensus 54 ~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~-~~~---~~~~~~~~l~~~la~~~~---~~~~v~~~~sgseA~~ 126 (434)
T 2epj_A 54 DGARIVDLVLAYGPLILGHKHPRVLEAVEEALARGW-LYG---APGEAEVLLAEKILGYVK---RGGMIRFVNSGTEATM 126 (434)
T ss_dssp TCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCS-CCS---SCCHHHHHHHHHHHHHHC---TTCEEEEESSHHHHHH
T ss_pred CCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhCC-CCC---CCCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHHHH
Confidence 4677899998873 344 47899999999987642 221 234566677777766654 4689999999999999
Q ss_pred HHHHH---hcCCCCEEEEcCCCCCChHHHHH--------------HcCC------EEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 170 QAVLA---VCSPGDEVIIPAPFWVSYPEMAR--------------IADA------TPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 170 ~~l~~---l~~~gd~Vlv~~p~y~~~~~~~~--------------~~g~------~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
.++++ +. +++.|++.+|+|+++...+. ..|+ .++.++. .|++.|+++++
T Consensus 127 ~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~ 198 (434)
T 2epj_A 127 TAIRLARGYT-GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALERVFA 198 (434)
T ss_dssp HHHHHHHHHH-CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHHHHH
T ss_pred HHHHHHHHhh-CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHHHHH
Confidence 99987 44 45788888999987544221 1232 2445543 28999999886
Q ss_pred c---CCcEEEEcCCCCCccCCC-CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccCh
Q 014172 227 E---KSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSK 302 (429)
Q Consensus 227 ~---~~~~i~l~~p~NPtG~~~-~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 302 (429)
+ ++++|+++..+|+||.++ +.+++++|.++|++| |+++|+||+|.++ ..+. ......+.. . ..+.||||
T Consensus 199 ~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~-g~~lI~DEv~~g~-~~g~-~~~~~~~~~-~---~di~s~sK 271 (434)
T 2epj_A 199 EYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRES-GALLILDEVVTGF-RLGL-EGAQGYFNI-E---GDIIVLGK 271 (434)
T ss_dssp HHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHH-TCEEEEEETTTTT-TSST-THHHHHHTC-C---CSEEEEEG
T ss_pred hCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHc-CCEEEEEcchhce-eCCc-chhhHHhCC-C---CCeeeecc
Confidence 3 555655554467899876 699999999999999 9999999999976 3232 111111111 1 11458999
Q ss_pred hcccccceeeEEEcCHHHHHHHHHHh---hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC
Q 014172 303 AFAMTGWRLGYIAGPKHFVAACNKIQ---SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE 379 (429)
Q Consensus 303 ~~~~~G~R~G~v~~~~~~~~~l~~~~---~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~ 379 (429)
.++ .|+|+||+++++++++.+.... ...+++.+.+++.++.++|+. .++ +++.++++++++++.+.|+++.
T Consensus 272 ~l~-~G~~~G~v~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~---~~~--~~~~~~~~~~~~~l~~~L~~~~ 345 (434)
T 2epj_A 272 IIG-GGFPVGAVAGSREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKA---LEE--EPVYSVSREAAKALEEAASEVL 345 (434)
T ss_dssp GGG-TTSSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHH---HHH--SCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhc-CCcceeeeeecHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHH---HHh--cCHHHHHHHHHHHHHHHHHHHH
Confidence 999 5999999999999887765421 123456788888888888874 122 3456777778888888777641
Q ss_pred ---Cce-eecCCceEEEEEecCCc-cCCcccCC-CCCCChHHHHHHHHHhCCeec
Q 014172 380 ---GVK-MSEPQGAFYLFIDFSTY-YGSEAEGF-GKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 380 ---g~~-~~~p~~~~~~~~~l~~~-~~~~~~~~-~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++. ..++.| .|+|+.++.. ........ ....+..+++++|+++ ||.+
T Consensus 346 ~~~~~~~~~~~~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v 398 (434)
T 2epj_A 346 DRTGLPYTINRVE-SMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRR-GVFI 398 (434)
T ss_dssp HHHTCCEEEEEET-TEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHT-TEEC
T ss_pred hhCCCcEEEEEee-eEEEEEEeCCCcccchhccccCHHHHHHHHHHHHHC-CeEE
Confidence 332 234444 4578888641 00000000 0001356888888865 9986
No 193
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.94 E-value=4.7e-26 Score=227.87 Aligned_cols=306 Identities=14% Similarity=0.135 Sum_probs=205.5
Q ss_pred cCCCeEEcCCCC--CCCC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGE--PDFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.+|||..|. ..++ .|+++.+++.+.+.++. .|+ +..++++++++++.+.++ .+++|++++|+++++.
T Consensus 50 ~g~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~---~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~ea~~ 122 (424)
T 2e7u_A 50 DGNRYLDYVMSWGPLILGHAHPKVLARVRETLERGL-TFG---APSPLEVALAKKVKRAYP---FVDLVRFVNSGTEATM 122 (424)
T ss_dssp TCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCS-CCS---SCCHHHHHHHHHHHHHCT---TCCEEEEESSHHHHHH
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHHhCC-CCC---CCCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHHHH
Confidence 467789999886 3444 47999999999987642 232 345677888888877764 5689999999999999
Q ss_pred HHHHH---hcCCCCEEEEcCCCCCChHHHHHH--------------cCC------EEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 170 QAVLA---VCSPGDEVIIPAPFWVSYPEMARI--------------ADA------TPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 170 ~~l~~---l~~~gd~Vlv~~p~y~~~~~~~~~--------------~g~------~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
.+++. +.+ ++.|++.+|+|+++...+.. .|+ .++.++. .|++.|++.++
T Consensus 123 ~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~ 194 (424)
T 2e7u_A 123 SALRLARGYTG-RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLREVLK 194 (424)
T ss_dssp HHHHHHHHHHC-CCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHHHHH
T ss_pred HHHHHHHHhhC-CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHHHHH
Confidence 99886 554 57888999999886543321 122 3444543 28999999886
Q ss_pred c--CCcEEEEcCCCCC-ccCCC-CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccCh
Q 014172 227 E--KSRLLILCSPSNP-TGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSK 302 (429)
Q Consensus 227 ~--~~~~i~l~~p~NP-tG~~~-~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 302 (429)
. +..++++++|+|+ ||.++ +++++++|.++ ++| |+++|+||+|.++ ..+. ......+.. ... +.||||
T Consensus 195 ~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~-g~~lI~DEv~~g~-~~g~-~~~~~~~~~-~~d---i~s~sK 266 (424)
T 2e7u_A 195 RRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAY-GVLLIADEVMTGF-RLAF-GGATELLGL-KPD---LVTLGK 266 (424)
T ss_dssp HHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGG-TCEEEEECTTTTT-TSST-THHHHHHTC-CCS---EEEECG
T ss_pred hCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHc-CCEEEEecCcccc-ccch-hHHHHHhCC-Ccc---hhhhhh
Confidence 3 2334555667654 89765 78999999999 999 9999999999987 3332 111111111 111 348999
Q ss_pred hcccccceeeEEEcCHHHHHHHHHHh---hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC-
Q 014172 303 AFAMTGWRLGYIAGPKHFVAACNKIQ---SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL- 378 (429)
Q Consensus 303 ~~~~~G~R~G~v~~~~~~~~~l~~~~---~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l- 378 (429)
.++ +|+|+||+++++++++.+.... ...+++.+.+++.++.++|+. .++ .+++.++++++++++.+.|+++
T Consensus 267 ~l~-~G~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~---~~~-~~~~~~~~~~~~~~l~~~L~~~~ 341 (424)
T 2e7u_A 267 ILG-GGLPAAAYAGRREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLEL---LEE-NPGYYAYLEDLGARLEAGLKEVL 341 (424)
T ss_dssp GGG-TTSSCEEEEECHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHH---HHH-CTHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhh-CCcceEEEEEcHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHH---HHh-ccHHHHHHHHHHHHHHHHHHHHH
Confidence 999 6999999999999888765421 223456788899998888874 222 2456777778888888887764
Q ss_pred --CCce-eecCCceEEEEEecCCcc-CCcccCC-CCCCChHHHHHHHHHhCCeec
Q 014172 379 --EGVK-MSEPQGAFYLFIDFSTYY-GSEAEGF-GKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 379 --~g~~-~~~p~~~~~~~~~l~~~~-~~~~~~~-~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.++. ..++.|. |+|++++... ....+.. ....+..+++++|++ .||.+
T Consensus 342 ~~~~~~~~~~~~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v 394 (424)
T 2e7u_A 342 KEKGLPHTVNRVGS-MITVFFTEGPVVTFQDARRTDTELFKRFFHGLLD-RGIYW 394 (424)
T ss_dssp HHTTCCCEEEEETT-EEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHT-TTEEC
T ss_pred HhCCCceEEEeece-EEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHH-CCeEE
Confidence 1432 2345554 6888886410 0000000 000125678888885 59986
No 194
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.94 E-value=1.9e-24 Score=216.89 Aligned_cols=218 Identities=15% Similarity=0.194 Sum_probs=167.4
Q ss_pred CHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH----HHHcCCEEEEecCC
Q 014172 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADATPVILPTR 209 (429)
Q Consensus 134 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~v~~~ 209 (429)
..++++++++++ |. .+.|++++| ++++..++++++++||+|+++.|.|.++... ++..|++++.++.+
T Consensus 116 ~~~l~~~lA~l~----g~---~~~v~~~sG-~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~ 187 (445)
T 1qgn_A 116 TVVLEEKISALE----GA---ESTLLMASG-MCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPA 187 (445)
T ss_dssp HHHHHHHHHHHH----TC---SEEEEESCH-HHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSS
T ss_pred HHHHHHHHHHHh----CC---CcEEEeCCH-HHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC
Confidence 346777777765 42 245555555 5999999999999999999999999987664 55689999999862
Q ss_pred CCCCCCCCHHHHHhhcccCC-cEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCC
Q 014172 210 ISENFLLDPKVLESKLTEKS-RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 288 (429)
Q Consensus 210 ~~~~~~~d~e~l~~~l~~~~-~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~ 288 (429)
|++++++++++++ ++|++++|+||||.+++ +++|.++|++| |+++|+|++|....+. .+ .
T Consensus 188 -------d~~~l~~ai~~~tv~lV~le~p~NptG~v~d---l~~I~~la~~~-g~~livD~a~~~~~~~----~~-~--- 248 (445)
T 1qgn_A 188 -------DVGALELALNQKKVNLFFTESPTNPFLRCVD---IELVSKLCHEK-GALVCIDGTFATPLNQ----KA-L--- 248 (445)
T ss_dssp -------CHHHHHHHHHHSCEEEEEEESSCTTTCCCCC---HHHHHHHHHHT-TCEEEEECTTTCTTTC----CT-T---
T ss_pred -------CHHHHHHHhccCCCCEEEEeCCCCCCCcccC---HHHHHHHHHHc-CCEEEEECCCcccccC----Cc-c---
Confidence 8999999999889 99999999999999999 89999999999 9999999999864321 11 1
Q ss_pred CCCCceEEEeccChhccccc-ceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 014172 289 GMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 367 (429)
Q Consensus 289 ~~~~~~i~~~S~SK~~~~~G-~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~ 367 (429)
..+.++++.|+||.+|..| .++||+++++++++.+.......+...+.+...++...++ .+....+++.++
T Consensus 249 -~~g~Div~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~-------~l~~r~~~~~~~ 320 (445)
T 1qgn_A 249 -ALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNLHHILGGALNPNAAYLIIRGMK-------TLHLRVQQQNST 320 (445)
T ss_dssp -TTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHGG-------GHHHHHHHHHHH
T ss_pred -ccCCEEEEECCcccccccccceEEEEEECHHHHHHHHHHHHHhCCCCCHHHHHHHHHhHH-------HHHHHHHHHHHH
Confidence 1355699999999998444 4799999999999888776655555556665555444443 244555667777
Q ss_pred HHHHHHHhccCCCc-eeecC
Q 014172 368 RDFLVKSFGELEGV-KMSEP 386 (429)
Q Consensus 368 r~~l~~~L~~l~g~-~~~~p 386 (429)
++.+.+.|++.|++ .+..|
T Consensus 321 a~~l~~~L~~~p~v~~v~~p 340 (445)
T 1qgn_A 321 ALRMAEILEAHPKVRHVYYP 340 (445)
T ss_dssp HHHHHHHHHTCTTEEEEECT
T ss_pred HHHHHHHHhcCCCceEEECC
Confidence 88899999988777 44433
No 195
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.93 E-value=6.5e-26 Score=228.69 Aligned_cols=304 Identities=10% Similarity=0.066 Sum_probs=209.7
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHH-H-HHHH---HHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecCh
Q 014172 93 AGVSVIRLAAGE--PDFDT-PVLIA-E-AGIN---AIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGA 164 (429)
Q Consensus 93 ~g~~~i~L~~g~--~~~~~-p~~v~-~-a~~~---~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~ 164 (429)
.|+..+|+..|. .+++. |+.+. + ++.+ .+.... .|+ ..+..+.+.++++.+.+.++. ..+++|++|+|+
T Consensus 52 ~g~~ylD~~~~~~~~~lG~~~p~v~~~~A~~~~~~~~~~~~-~~~-~~~~~~~~~~la~~la~~~~~-~~~~~v~~~~~g 128 (449)
T 2cjg_A 52 TGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNK-PSN-SDVYSVAMARFVETFARVLGD-PALPHLFFVEGG 128 (449)
T ss_dssp TCCEEEESSHHHHTCSSCBSCHHHHTCHHHHHHHHHHHTCC-CCT-TTCCCHHHHHHHHHHHHHHCC-TTCCEEEEESSH
T ss_pred CCcEEEEccCCccccCCCCCCHHHHHHHHHHHHHHHHHhcC-CCC-cccCCHHHHHHHHHHHHhcCC-CCCCEEEEeCch
Confidence 466789987776 34553 78999 8 9998 776542 343 234455666777777766652 357899999999
Q ss_pred HHHHHHHHHHhc---C----------C-CCEEEEcCCCCCChHHHHHH-c--------CC-----EEEEecCCCCCCC--
Q 014172 165 KQSILQAVLAVC---S----------P-GDEVIIPAPFWVSYPEMARI-A--------DA-----TPVILPTRISENF-- 214 (429)
Q Consensus 165 ~~al~~~l~~l~---~----------~-gd~Vlv~~p~y~~~~~~~~~-~--------g~-----~~~~v~~~~~~~~-- 214 (429)
+++++.+++.+. . + ||+|++.+|+|+++...+.. . +. .++.+|.+..+..
T Consensus 129 seA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 208 (449)
T 2cjg_A 129 ALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEP 208 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHH
T ss_pred HHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhcc
Confidence 999999987543 2 2 89999999999976543222 1 22 5566665320011
Q ss_pred ------CCCHHHHHhhcc---cCCcEEEEcCCCCCcc-CCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCcc
Q 014172 215 ------LLDPKVLESKLT---EKSRLLILCSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF 284 (429)
Q Consensus 215 ------~~d~e~l~~~l~---~~~~~i~l~~p~NPtG-~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~ 284 (429)
..+++.|++.++ +++++|+++.++|||| .+.+++++++|.++|++| |+++|+||+|.++.+.|.. ..+
T Consensus 209 ~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~-g~lli~DEv~~g~g~~g~~-~~~ 286 (449)
T 2cjg_A 209 AMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEF-DALLIFDEVQTGCGLTGTA-WAY 286 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSS-STH
T ss_pred ccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHC-CcEEEEeccccCCCccCcc-eee
Confidence 245667888884 5677766665579999 599999999999999999 9999999999987665531 111
Q ss_pred ccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHH-----HHhhcccCCCchHHHHHHHHHHhcCCCChHHHHH
Q 014172 285 ASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN-----KIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 359 (429)
Q Consensus 285 ~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~-----~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~ 359 (429)
..+.. ... +.||||.+ |+||+++++++++.+. ......+++.+.+++.++.++|+. .++ ++
T Consensus 287 ~~~~~-~~d---i~t~sK~l-----~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~---~~~--~~ 352 (449)
T 2cjg_A 287 QQLDV-APD---IVAFGKKT-----QVCGVMAGRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEV---IEA--EG 352 (449)
T ss_dssp HHHTC-CCS---EEEECGGG-----SSEEEEECGGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHH---HHH--HT
T ss_pred cccCC-Cce---EEEecCcc-----cEEEEEECHHHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHH---HHh--cc
Confidence 11111 112 34799987 7999999998877522 222334567789999999999874 222 34
Q ss_pred HHHHHHHHHHHHHHHhccC----CC-ceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 360 MVKAFRERRDFLVKSFGEL----EG-VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 360 ~~~~~~~~r~~l~~~L~~l----~g-~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.++++++++++.+.|+++ ++ +...++.|.| ++++++.. .+..+++++|+++ ||.+
T Consensus 353 ~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~~g~~-~~~~~~~~-----------~~~~~~~~~l~~~-Gv~v 413 (449)
T 2cjg_A 353 LFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLM-CAFSLPTT-----------ADRDELIRQLWQR-AVIV 413 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTTSEEEEEETTE-EEEECSSH-----------HHHHHHHHHHHHT-TEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCceeeEeeccEE-EEEEECCh-----------HHHHHHHHHHHHC-CeEE
Confidence 6677788888888888753 55 6666677666 56788642 1467899999865 8876
No 196
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.93 E-value=1.2e-24 Score=213.77 Aligned_cols=271 Identities=17% Similarity=0.202 Sum_probs=198.0
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCEEEEcCCC
Q 014172 110 PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPF 188 (429)
Q Consensus 110 p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l-~~~gd~Vlv~~p~ 188 (429)
++++.+++.+.+..+ .|++..+..++|++++++++ .+++++++|+++++..++.++ +++||+|+++.|+
T Consensus 16 ~~~~~~a~~~~~~~~--~~~~~~~~~~l~~~la~~~~--------~~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~ 85 (373)
T 3frk_A 16 EYEIKFKFEEIYKRN--WFILGDEDKKFEQEFADYCN--------VNYCIGCGNGLDALHLILKGYDIGFGDEVIVPSNT 85 (373)
T ss_dssp HHHHHHHHHHHHHHT--CCSSSHHHHHHHHHHHHHHT--------SSEEEEESCHHHHHHHHHHHTTCCTTCEEEEETTS
T ss_pred CHHHHHHHHHHHHCC--CccCCchHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCC
Confidence 577888888887764 46677788999999999974 248999999999999999999 8999999999999
Q ss_pred CCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEc
Q 014172 189 WVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 268 (429)
Q Consensus 189 y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~D 268 (429)
|.++...++..|++++.+++++ +++.+|++++++++++++++|+ |+||||...+ +++|.++|++| |+++|+|
T Consensus 86 ~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~~---l~~i~~l~~~~-~~~li~D 157 (373)
T 3frk_A 86 FIATALAVSYTGAKPIFVEPDI-RTYNIDPSLIESAITEKTKAII---AVHLYGQPAD---MDEIKRIAKKY-NLKLIED 157 (373)
T ss_dssp CTHHHHHHHHHSCEEEEECEET-TTTEECGGGTGGGCCTTEEEEE---EECCTTCCCC---HHHHHHHHHHH-TCEEEEE
T ss_pred cHHHHHHHHHcCCEEEEEeccc-cccCcCHHHHHHhcCCCCeEEE---EECCCcCccc---HHHHHHHHHHc-CCEEEEE
Confidence 9999999999999999999875 3477999999999998888887 7889999998 88999999999 9999999
Q ss_pred cCCcccc-cCCCCCCccccCCCCCCceEEEeccC--hhcccccceeeEEEcC-HHHHHHHHHHhhcc------------c
Q 014172 269 EIYEHII-YAPATHTSFASLPGMWERTLTVNGFS--KAFAMTGWRLGYIAGP-KHFVAACNKIQSQF------------T 332 (429)
Q Consensus 269 eay~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~~~~G~R~G~v~~~-~~~~~~l~~~~~~~------------~ 332 (429)
++|..+. +++.. ...+ ..+.+.||| |.++..| +.|+++++ +++++.+....... +
T Consensus 158 ~a~~~g~~~~~~~---~~~~-----~d~~~~S~~~~K~l~~~g-~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~ 228 (373)
T 3frk_A 158 AAQAHGSLYKGMK---VGSL-----GDAAGFSFYPAKNLGSLG-DGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFN 228 (373)
T ss_dssp CTTCTTCEETTEE---TTSS-----SSEEEEECCTTSSSCCSS-SCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCB
T ss_pred CCcccCCEECCEe---cccc-----ccEEEEeCcCCCccCccc-eeEEEEeCCHHHHHHHHHHHhcCcccCCcccccccc
Confidence 9998633 22211 1111 137888887 8876224 47888876 56777776554321 1
Q ss_pred CCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeec-CCceEEEE--EecCCccCCcccCCCC
Q 014172 333 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-PQGAFYLF--IDFSTYYGSEAEGFGK 409 (429)
Q Consensus 333 ~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~-p~~~~~~~--~~l~~~~~~~~~~~~~ 409 (429)
...+.+...++...+ +.+++..++.+++++++.+.|++++ +.+.. +.+....| +.+..
T Consensus 229 ~~~~~~~aa~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~----------- 289 (373)
T 3frk_A 229 SRLDELQAGFLRVKL-------KYLDKWNEERRKIAQKYIAGINNPN-VIIPVEADYAKHVWYTFVIRS----------- 289 (373)
T ss_dssp CCCCHHHHHHHHHHH-------HTHHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTEECCCSSEEEEE-----------
T ss_pred CCCCHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCCceeeEEEEEEe-----------
Confidence 122443333332222 2355667777888888999998874 55532 22222222 22211
Q ss_pred CCChHHHHHHHHHhCCeec
Q 014172 410 IENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 410 ~~~~~~~~~~Ll~~~gV~v 428 (429)
.+..++.+.|.++ ||.+
T Consensus 290 -~~~~~l~~~L~~~-gI~v 306 (373)
T 3frk_A 290 -EKRDELQKYLNNN-GIGT 306 (373)
T ss_dssp -SSHHHHHHHHHHT-TBCC
T ss_pred -CCHHHHHHHHHHC-CCCc
Confidence 1577888888776 8876
No 197
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.93 E-value=4.1e-24 Score=214.66 Aligned_cols=286 Identities=15% Similarity=0.183 Sum_probs=202.2
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHH
Q 014172 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (429)
Q Consensus 94 g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~ 173 (429)
|+++|.|+ .|++ ++++.+++.+++... .|.+..+..+++++++++++ .+++++++++++++..++.
T Consensus 30 ~~~~i~~~--~~~~--~~~~~~a~~~~~~~~--~~~~~~~~~~l~~~la~~~g--------~~~~i~~~sGt~a~~~al~ 95 (437)
T 3bb8_A 30 GKSVVPPS--GKVI--GTKELQLMVEASLDG--WLTTGRFNDAFEKKLGEYLG--------VPYVLTTTSGSSANLLALT 95 (437)
T ss_dssp TTSCBCSC--CCCC--CHHHHHHHHHHHHHC--CCBSCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHH
T ss_pred CCccccCC--CCCC--CHHHHHHHHHHHHcC--CcCCChHHHHHHHHHHHHHC--------CCcEEEeCCHHHHHHHHHH
Confidence 34456663 3333 467888888887653 45566778899999999974 1267888888899999999
Q ss_pred Hh---------cCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCC
Q 014172 174 AV---------CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSV 244 (429)
Q Consensus 174 ~l---------~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~ 244 (429)
++ +++||+|+++.|+|.++...++..|++++.+++++ +++.+|++.+++++++++++|++++ ++|..
T Consensus 96 ~l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~ 171 (437)
T 3bb8_A 96 ALTSPKLGVRALKPGDEVITVAAGFPTTVNPTIQNGLIPVFVDVDI-PTYNVNASLIEAAVSDKTKAIMIAH---TLGNL 171 (437)
T ss_dssp HTTCGGGGGGSCCTTCEEEECSSSCHHHHHHHHHTTCEEEECCEET-TTTEECGGGHHHHCCTTEEEEEEEC---GGGCC
T ss_pred HhhhcccccccCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEeccC-ccCCcCHHHHHHhcCCCCeEEEEeC---CCCCh
Confidence 98 88999999999999999999999999999999864 3577999999999998999999874 34544
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEEccCCcccc-cCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHH
Q 014172 245 YPKNLLDEIARIVAKHPRLLVLSDEIYEHII-YAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA 323 (429)
Q Consensus 245 ~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~ 323 (429)
.+ +++|.++|++| |+++|+|++|.... +++. .+... ..+++.||+|.++++|.|.||++++++.+..
T Consensus 172 ~~---~~~i~~l~~~~-~~~li~D~a~~~g~~~~~~------~~~~~--~d~~~~s~~~~k~l~~g~gg~~~~~~~~~~~ 239 (437)
T 3bb8_A 172 FD---LAEVRRVADKY-NLWLIEDCCDALGSTYDGK------MAGTF--GDIGTVSFYPAKHITMGEGGAVFTQSAELKS 239 (437)
T ss_dssp CC---HHHHHHHHHHH-TCEEEEECTTCTTCEETTE------ETTSS--SSEEEEECSTTSSSCCSSCEEEEESCHHHHH
T ss_pred hc---HHHHHHHHHHc-CCEEEEECccccCceECCe------ecccc--cCEEEEECcCCcCCCCCCeEEEEeCCHHHHH
Confidence 56 99999999999 99999999998532 2211 11111 1277899999998999999999998655443
Q ss_pred -HHHHhhc---------------------------------------ccCCCchHHHHHHHHHHhcCCCChHHHHHHHHH
Q 014172 324 -CNKIQSQ---------------------------------------FTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (429)
Q Consensus 324 -l~~~~~~---------------------------------------~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~ 363 (429)
+...... ++...+.+...++.+.|+. +.+..++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~-------~~~~~~~ 312 (437)
T 3bb8_A 240 IIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLER-------IEEFVEK 312 (437)
T ss_dssp HHHHHHBTTBCC----------------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHHH-------HHHHHHH
T ss_pred HHHHHHHhCcccccccccccccccccccccccccccccccccccccCcccCCCHHHHHHHHHHHHH-------HHHHHHH
Confidence 3221100 0111234555555555542 2344455
Q ss_pred HHHHHHHHHHHhccCCCceeecCC------c--eEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 364 FRERRDFLVKSFGELEGVKMSEPQ------G--AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 364 ~~~~r~~l~~~L~~l~g~~~~~p~------~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+++++++.+.|++++|+...+.. + .|.+.++.+.. .+..++.++|.++ ||.+
T Consensus 313 ~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~l~~~L~~~-GI~v 373 (437)
T 3bb8_A 313 RKANFKYLKDALQSCADFIELPEATENSDPSWFGFPITLKEDSG-----------VSRIDLVKFLDEA-KVGT 373 (437)
T ss_dssp HHHHHHHHHHHGGGGTTTEECCCCCTTEECCCSSEEEEECGGGS-----------SCHHHHHHHHHHT-TBCC
T ss_pred HHHHHHHHHHHhhccCCccccCCCCCCCceeeEEEEEEECCcCc-----------CcHHHHHHHHHHC-CCce
Confidence 577788899999988776554311 1 22233554311 2678899988776 8876
No 198
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.93 E-value=1.9e-25 Score=223.87 Aligned_cols=311 Identities=14% Similarity=0.100 Sum_probs=192.0
Q ss_pred cCCCeEEcCCCCC--CCC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHH
Q 014172 93 AGVSVIRLAAGEP--DFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~~--~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 169 (429)
.|+.++|+..|.. .++ .+|++.+++.+.+.+....+.+. +....+++.+.+.++ .+++|++|+|+++++.
T Consensus 51 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~----~~~~~la~~l~~~~~---~~~~v~~~~sGsea~~ 123 (429)
T 4e77_A 51 DGKAYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSFGAPT----EMEVKMAQLVTDLVP---TMDMVRMVNSGTEATM 123 (429)
T ss_dssp TCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSSCC----HHHHHHHHHHHHHST---TCSEEEEESSHHHHHH
T ss_pred CCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcccCCCC----HHHHHHHHHHHhhCC---CCCEEEEeCcHHHHHH
Confidence 5778999998874 344 37999999999987643222233 455556666655554 4689999999999999
Q ss_pred HHHHHhc--CCCCEEEEcCCCCCChHHHHH-HcCC-------------------EEEEecCCCCCCCCCCHHHHHhhccc
Q 014172 170 QAVLAVC--SPGDEVIIPAPFWVSYPEMAR-IADA-------------------TPVILPTRISENFLLDPKVLESKLTE 227 (429)
Q Consensus 170 ~~l~~l~--~~gd~Vlv~~p~y~~~~~~~~-~~g~-------------------~~~~v~~~~~~~~~~d~e~l~~~l~~ 227 (429)
.+++... ..++.|++.+++|+++...+. ..|. .+..++. .|+++|+++++.
T Consensus 124 ~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~ 196 (429)
T 4e77_A 124 SAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTY-------NDLASVRQAFEQ 196 (429)
T ss_dssp HHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECT-------TCHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCC-------CCHHHHHHHHHh
Confidence 9988643 356889999999988765222 1111 1111211 189999998863
Q ss_pred --CCcEEEEcCCCCCcc-CCC-CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChh
Q 014172 228 --KSRLLILCSPSNPTG-SVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKA 303 (429)
Q Consensus 228 --~~~~i~l~~p~NPtG-~~~-~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 303 (429)
+..++++++|+|++| .+. +.+.+++|.++|++| |+++|+||+|.+| ..+.. .....+.. .. -+.||||.
T Consensus 197 ~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~-~~lli~DEv~~g~-r~g~~-~~~~~~~~-~p---di~t~sK~ 269 (429)
T 4e77_A 197 YPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEF-GALLIIDEVMTGF-RVALA-GAQDYYHV-IP---DLTCLGKI 269 (429)
T ss_dssp STTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHH-TCEEEEEETTTBT-TTBTT-CHHHHTTC-CC---SEEEEEGG
T ss_pred cCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCc-ccCcc-hHHHhcCC-CC---Ceeeeccc
Confidence 234555667766554 333 355699999999999 9999999999987 43321 11111111 11 14589999
Q ss_pred cccccceeeEEEcCHHHHHHHHHH---hhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCC
Q 014172 304 FAMTGWRLGYIAGPKHFVAACNKI---QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG 380 (429)
Q Consensus 304 ~~~~G~R~G~v~~~~~~~~~l~~~---~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g 380 (429)
++ +|+|+||+++++++++.+... ....+++.+.+++.++.++|+... .++.+++.++..+..++.+.+.+.++ +
T Consensus 270 ~~-~G~~~G~~~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~-~ 346 (429)
T 4e77_A 270 IG-GGMPVGAFGGRREVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEIS-QVGVYETLTELTDSLATGLRHAAKEE-N 346 (429)
T ss_dssp GG-TTSCCEEEEECHHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHT-STTHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred cc-CCCCeEEEEECHHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHHhC-C
Confidence 99 899999999999998877642 123345688999999999887421 13334444443344444444444344 3
Q ss_pred ceeecCCceEEEEEecCCccCC-cc--cCCCCCCChHHHHHHHHHhCCeec
Q 014172 381 VKMSEPQGAFYLFIDFSTYYGS-EA--EGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 381 ~~~~~p~~~~~~~~~l~~~~~~-~~--~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+....+..|+|+|+.++..... .. -.........+++++|+++ ||.+
T Consensus 347 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v 396 (429)
T 4e77_A 347 IPLVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEE-GVYL 396 (429)
T ss_dssp CCCEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHT-TEEC
T ss_pred CceEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHHHHC-CeEE
Confidence 3333344556688888642000 00 0000000137889998877 8876
No 199
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.93 E-value=4.9e-24 Score=217.77 Aligned_cols=311 Identities=13% Similarity=0.077 Sum_probs=221.2
Q ss_pred cCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEE---EecChHHHHH
Q 014172 93 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQIL---VSNGAKQSIL 169 (429)
Q Consensus 93 ~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~---~t~G~~~al~ 169 (429)
.|.+.++|+.-.+ ..+++.+.+++.+++......|...++..++++.+.+++.+.+|.+.++++++ +|+|+++++.
T Consensus 53 ~gnp~~~l~s~~t-~~~~~~v~~~l~~~~~~~~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~ 131 (502)
T 3hbx_A 53 DGNPRLNLASFVT-TWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIM 131 (502)
T ss_dssp SCCGGGBTTCCSC-CCCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHH
T ss_pred CCCCCceeccccC-CCCCHHHHHHHHHHhccCCCChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHH
Confidence 3444455543222 23467888888888766555565556678899999999999999764455544 5999999999
Q ss_pred HHHHHhcCC--------CC-----EEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcC
Q 014172 170 QAVLAVCSP--------GD-----EVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS 236 (429)
Q Consensus 170 ~~l~~l~~~--------gd-----~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~ 236 (429)
+++.++.++ |+ +|+++.++|..+...++..|++++.+|+++ +++.+|+++|++++++++++|++++
T Consensus 132 ~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~t~~v~~~~ 210 (502)
T 3hbx_A 132 LAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPQQAVDMVDENTICVAAIL 210 (502)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBT-TBCSCCHHHHHHHCCTTEEEEEEEB
T ss_pred HHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCC-CcCcCCHHHHHHHHhhCCEEEEEec
Confidence 998888665 76 999999999999999999999999999864 4478999999999999999999999
Q ss_pred CCCCccCCCCHHHHHHHHHHHHhCC-----CeEEEEccCCccccc---CCCCCCccccCCCCCCceEEEeccChhccccc
Q 014172 237 PSNPTGSVYPKNLLDEIARIVAKHP-----RLLVLSDEIYEHIIY---APATHTSFASLPGMWERTLTVNGFSKAFAMTG 308 (429)
Q Consensus 237 p~NPtG~~~~~~~l~~I~~~a~~~~-----~i~vi~Deay~~~~~---~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 308 (429)
|+||||.+.+ +++|.++|++++ |+++++|++|+.+.. .+.....+ . ..+..++..|.+|.++ .+
T Consensus 211 ~~n~tG~~~~---l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~---~-~~~~D~v~~s~hK~l~-~p 282 (502)
T 3hbx_A 211 GSTLNGEFED---VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDF---R-LPLVKSINVSGHKYGL-VY 282 (502)
T ss_dssp SCTTTCCBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCST---T-STTEEEEEEETTTTTC-CC
T ss_pred CCCCCCcccC---HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCccccccc---C-CCCceEEEECcccccC-CC
Confidence 9999999999 888888888762 799999999987541 22211111 1 1345577888999875 77
Q ss_pred ceeeEEEcC-HHHHHHHHHHhhccc----------CCC---chHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHH
Q 014172 309 WRLGYIAGP-KHFVAACNKIQSQFT----------SGA---SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKS 374 (429)
Q Consensus 309 ~R~G~v~~~-~~~~~~l~~~~~~~~----------~~~---~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~ 374 (429)
.++||++.. ++.+.........+. ... ..+.+.++...+. .+.+.++.++..++++++.+.
T Consensus 283 ~g~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg-----~~g~~~~~~~~~~~a~~l~~~ 357 (502)
T 3hbx_A 283 AGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG-----HEGYRNVMENCRENMIVLREG 357 (502)
T ss_dssp SSCEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHH
Confidence 889988764 443322111110110 111 2333444444443 355677888888899999999
Q ss_pred hccCCCceeecC-CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 375 FGELEGVKMSEP-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 375 L~~l~g~~~~~p-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|++++++++..+ ....++.+++++.. ..+..+++++|.++ ||.+
T Consensus 358 L~~~~~~~~~~~~~~~~~v~f~~~~~~---------~~~~~~l~~~L~~~-Gi~v 402 (502)
T 3hbx_A 358 LEKTERFNIVSKDEGVPLVAFSLKDSS---------CHTEFEISDMLRRY-GWIV 402 (502)
T ss_dssp HHTTTCEEECSCSSSSSEEEEEESSCS---------SCCHHHHHHHHHTT-TCBC
T ss_pred HHhCCCEEEEeCCCCceEEEEEecCCC---------cCCHHHHHHHHHhC-CcEE
Confidence 999977988765 33344777776420 02567899988766 8865
No 200
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.93 E-value=1.5e-24 Score=215.00 Aligned_cols=214 Identities=13% Similarity=0.119 Sum_probs=166.3
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH----HHHHcCCEEEEe
Q 014172 131 NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVIL 206 (429)
Q Consensus 131 ~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v 206 (429)
..+..++|+++|++++ . +++++++++++++..+++ ++++||+|+++.|.|.+... .++..|++++.+
T Consensus 54 ~~~~~~lr~~la~~~g----~----~~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v 124 (393)
T 1n8p_A 54 NPNRENLERAVAALEN----A----QYGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFT 124 (393)
T ss_dssp CHHHHHHHHHHHHHTT----C----SEEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEE
T ss_pred ChhHHHHHHHHHHHhC----C----CcEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEe
Confidence 3456788888888863 1 256666666999999999 99999999999999985444 346679999999
Q ss_pred cCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCC---CeEEEEccCCcccccCCCCCCc
Q 014172 207 PTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP---RLLVLSDEIYEHIIYAPATHTS 283 (429)
Q Consensus 207 ~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~---~i~vi~Deay~~~~~~~~~~~~ 283 (429)
|++ | +++++++++++++|++++|+||||.+++ +++|.++|++|+ |+++|+|++|..+.+. .
T Consensus 125 ~~~-------d-~~l~~~i~~~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~-----~ 188 (393)
T 1n8p_A 125 NDL-------L-NDLPQLIKENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS-----N 188 (393)
T ss_dssp SSH-------H-HHHHHHSCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-----C
T ss_pred CCC-------h-HHHHHhcccCceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccC-----C
Confidence 863 7 8999999989999999999999999999 899999999983 6999999999987653 1
Q ss_pred cccCCCCCCceEEEeccChhccccccee-eEEEc-CHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHH
Q 014172 284 FASLPGMWERTLTVNGFSKAFAMTGWRL-GYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 361 (429)
Q Consensus 284 ~~~~~~~~~~~i~~~S~SK~~~~~G~R~-G~v~~-~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~ 361 (429)
... .+.++++.|+||.+|.+|+|+ ||+++ ++++++.+......++...+...+.++...++. +....
T Consensus 189 ~~~----~~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-------~~~~~ 257 (393)
T 1n8p_A 189 PLN----FGADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT-------LHLRV 257 (393)
T ss_dssp GGG----GTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-------HHHHH
T ss_pred HHH----cCCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccch-------HHHHH
Confidence 122 246799999999999899999 99998 488888888776555555666666655555543 34445
Q ss_pred HHHHHHHHHHHHHhccCCC
Q 014172 362 KAFRERRDFLVKSFGELEG 380 (429)
Q Consensus 362 ~~~~~~r~~l~~~L~~l~g 380 (429)
+...++++.+.+.|.+.+.
T Consensus 258 ~~~~~~~~~l~~~L~~~~~ 276 (393)
T 1n8p_A 258 RQAALSANKIAEFLAADKE 276 (393)
T ss_dssp HHHHHHHHHHHHHHTSCTT
T ss_pred HHHHHHHHHHHHHHHhCCC
Confidence 5566677777777777644
No 201
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.93 E-value=1.5e-24 Score=215.27 Aligned_cols=271 Identities=15% Similarity=0.148 Sum_probs=193.9
Q ss_pred HHHHHHHHHHHHc-----C--CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEE---ecChHHHHHHHHHHhcCCCC
Q 014172 111 VLIAEAGINAIRE-----G--FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILV---SNGAKQSILQAVLAVCSPGD 180 (429)
Q Consensus 111 ~~v~~a~~~~~~~-----~--~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~---t~G~~~al~~~l~~l~~~gd 180 (429)
..+++++.+.... . .+.| +..|..+|++.+|+++ | .+..++ ++|+++++..++.+++++||
T Consensus 32 ~~vl~a~~~~~~~~~~~~~~~~~~y-~~~~~~~Le~~lA~l~----g----~e~alv~p~~~sGt~Ai~~al~all~~GD 102 (409)
T 3jzl_A 32 AKVLDAFQENKVSDFHFHPSTGYGY-DDEGRDTLERVYATVF----K----TEAALVRPQIISGTHAISTVLFGILRPDD 102 (409)
T ss_dssp HHHHHHHHHTTCCGGGGCCCCTTCT-TCHHHHHHHHHHHHHH----T----CSEEEEETTSCSHHHHHHHHHHHHCCTTC
T ss_pred HHHHHHHHHhhhhhhccCCCcCCCC-ChhHHHHHHHHHHHHh----C----CCcEEEECCCccHHHHHHHHHHHhcCCCC
Confidence 4566666664311 1 1234 2335567777777775 3 234555 88999999999999999999
Q ss_pred EEEEcC-CCCCChHHH----------HHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcC----CCCCccCCC
Q 014172 181 EVIIPA-PFWVSYPEM----------ARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS----PSNPTGSVY 245 (429)
Q Consensus 181 ~Vlv~~-p~y~~~~~~----------~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~----p~NPtG~~~ 245 (429)
+|++++ |.|..+... ++..|++++.+++++ ++.+|++++++++++++++|++++ |+||||.+.
T Consensus 103 ~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~--~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v~ 180 (409)
T 3jzl_A 103 ELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLE--NGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTIE 180 (409)
T ss_dssp EEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCT--TSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHH
T ss_pred EEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCC--CCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCccc
Confidence 999998 999998854 456799999999864 466899999999999999999999 999999886
Q ss_pred CHHHHHHHHHHHHh--CCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccccc-ceeeEEEcCHHHHH
Q 014172 246 PKNLLDEIARIVAK--HPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVA 322 (429)
Q Consensus 246 ~~~~l~~I~~~a~~--~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~R~G~v~~~~~~~~ 322 (429)
+ +++|+++|++ | |+++++|++|+.+.+... + . . .+.+++++|+||.+|.+| .+.||+++++++++
T Consensus 181 ~---l~~I~~la~~~~~-~~~livD~a~~~~~~~~~-p--~-~----~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~ 248 (409)
T 3jzl_A 181 K---IKEMIVFVKNINP-EVIVFVDNCYGEFVEYQE-P--P-E----VGADIIAGSLIKNPGGGLAKTGGYIAGKEALVD 248 (409)
T ss_dssp H---HHHHHHHHHHHCT-TCEEEEECTTCTTTSSCC-S--G-G----GTCSEEEEETTSGGGTTTCSSCEEEEECHHHHH
T ss_pred c---HHHHHHHHHhhCC-CCEEEEeCCcccccccCC-c--c-c----cCCeEEEECccccCCccCCceEEEEEeCHHHHH
Confidence 5 9999999999 9 999999999998654321 1 1 1 245699999999998555 44699999999999
Q ss_pred HHHHHhhcc----cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCC----ceEEEEE
Q 014172 323 ACNKIQSQF----TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ----GAFYLFI 394 (429)
Q Consensus 323 ~l~~~~~~~----~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~----~~~~~~~ 394 (429)
.+....... ..++....+.++...+ +.+..++++..+++.++.+.|+++ |+++.+.. ....+.+
T Consensus 249 ~l~~~~~~~~~g~~~g~~~~~~~~~l~gl-------~~~~~r~~~~~~~a~~la~~L~~~-g~~v~p~~~~~~~~~i~~i 320 (409)
T 3jzl_A 249 LCGYRLTTPGIGREAGASLYSLLEMYQGF-------FLAPHVTAQAIKGARFTAAMLAEF-GVEADPVWDAPRTDLIQSV 320 (409)
T ss_dssp HHHHHHSCTTTGGGCCCCTTCHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHT-TCEEESCTTSCCSSSCCEE
T ss_pred HHHHHhccccccccccccHHHHHHHHHHH-------hhHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCCCCCccEEEEE
Confidence 988754321 1122221123333333 335567778888999999999998 77764322 2223556
Q ss_pred ecCCccCCcccCCCCCCChHHHHHHHHHh
Q 014172 395 DFSTYYGSEAEGFGKIENSESLCRYLLDK 423 (429)
Q Consensus 395 ~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~ 423 (429)
.+.+. ....+|++.|.+.
T Consensus 321 ~l~~~-----------~~~~~~~~~L~~~ 338 (409)
T 3jzl_A 321 SFHNK-----------EKMVAFAQAIQAA 338 (409)
T ss_dssp ECSCH-----------HHHHHHHHHHHHT
T ss_pred EeCCH-----------HHHHHHHHHHHhc
Confidence 66432 2466888887665
No 202
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.93 E-value=9.2e-24 Score=210.43 Aligned_cols=214 Identities=12% Similarity=0.132 Sum_probs=165.4
Q ss_pred CHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHH----HHcCCEEEEecCC
Q 014172 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTR 209 (429)
Q Consensus 134 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~ 209 (429)
..++++.+|+++ | .+++++++|+++++.+++.+++++||+|+++.|.|.+....+ +..|++++.++.+
T Consensus 84 ~~~le~~lA~l~----g----~~~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~ 155 (415)
T 2fq6_A 84 HFSLQQAMCELE----G----GAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPL 155 (415)
T ss_dssp HHHHHHHHHHHH----T----CSEEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTT
T ss_pred HHHHHHHHHHHh----C----CCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCC
Confidence 456777777765 3 246778889999999999999999999999999998877554 4579999999752
Q ss_pred CCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHh--CCCeEEEEccCCcccccCCCCCCccccC
Q 014172 210 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK--HPRLLVLSDEIYEHIIYAPATHTSFASL 287 (429)
Q Consensus 210 ~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~--~~~i~vi~Deay~~~~~~~~~~~~~~~~ 287 (429)
|++++++++++++++|++++|+||||.+++ +++|+++|++ | |+++|+|++|....+. .++ .
T Consensus 156 -------d~~~le~ai~~~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~-g~~livD~a~a~~~~~----~p~-~- 218 (415)
T 2fq6_A 156 -------IGADIVKHLQPNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVP-DAIIMIDNTWAAGVLF----KAL-D- 218 (415)
T ss_dssp -------CGGGGGGGCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCT-TCEEEEECTTTTTTSS----CGG-G-
T ss_pred -------CHHHHHHhhccCCcEEEEECCCCCCCEeec---HHHHHHHHHhhcC-CCEEEEECCCcccccC----Ccc-c-
Confidence 899999999999999999999999999999 8999999999 9 9999999999864321 122 1
Q ss_pred CCCCCceEEEeccChhcccccce-eeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 014172 288 PGMWERTLTVNGFSKAFAMTGWR-LGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRE 366 (429)
Q Consensus 288 ~~~~~~~i~~~S~SK~~~~~G~R-~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~ 366 (429)
.+.++++.|++|.++.+|.+ +||+++++++++.+.......+...+.....++...+ +.+....++..+
T Consensus 219 ---~g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~~~~G~~~~~~~a~~~~~~l-------~~l~~r~~~~~~ 288 (415)
T 2fq6_A 219 ---FGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGL-------RTLGVRLRQHHE 288 (415)
T ss_dssp ---GTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTTCCCCHHHHHHHHHHH-------HHHHHHHHHHHH
T ss_pred ---cCCeEEEEeCccccCCCCCceEEEEEeCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhh-------hHHHHHHHHHHH
Confidence 35569999999999978765 5999998888888876655444444555444333333 345556666677
Q ss_pred HHHHHHHHhccCCCce
Q 014172 367 RRDFLVKSFGELEGVK 382 (429)
Q Consensus 367 ~r~~l~~~L~~l~g~~ 382 (429)
+...+.+.|++.|++.
T Consensus 289 n~~~l~~~L~~~~~v~ 304 (415)
T 2fq6_A 289 SSLKVAEWLAEHPQVA 304 (415)
T ss_dssp HHHHHHHHHHTCTTEE
T ss_pred HHHHHHHHHHcCCCee
Confidence 7888888887765543
No 203
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.93 E-value=2e-24 Score=216.04 Aligned_cols=233 Identities=15% Similarity=0.140 Sum_probs=170.2
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH----HHHHcCCEEEEe
Q 014172 131 NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVIL 206 (429)
Q Consensus 131 ~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v 206 (429)
++...+|++.+++++ | .+..++++++++++..++++++++||+|++++|+|.++.. .++..|++++.+
T Consensus 81 ~p~~~~le~~lA~l~----g----~~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v 152 (430)
T 3ri6_A 81 NPTVEDLEQRLKNLT----G----ALGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFV 152 (430)
T ss_dssp CHHHHHHHHHHHHHH----T----CSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHHH----C----CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEe
Confidence 344567777777765 3 2346666677899999999999999999999999998877 667899999999
Q ss_pred cCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCcccc
Q 014172 207 PTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS 286 (429)
Q Consensus 207 ~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~ 286 (429)
+.+ |++.+++++++++++|++++|+||||.+++ +++|.++|++| |+++|+|++|....+. ...
T Consensus 153 ~~~-------d~~~l~~ai~~~t~~v~~e~p~NptG~~~d---l~~i~~la~~~-g~~livD~a~~~~~~~-----~~~- 215 (430)
T 3ri6_A 153 DVM-------DSLAVEHACDETTKLLFLETISNPQLQVAD---LEALSKVVHAK-GIPLVVDTTMTPPYLL-----EAK- 215 (430)
T ss_dssp CTT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTT-TCCEEEECTTSCTTTC-----CGG-
T ss_pred CCC-------CHHHHHHhhCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCCcccccC-----ChH-
Confidence 863 899999999999999999999999999999 88999999999 9999999999854321 111
Q ss_pred CCCCCCceEEEeccChhcccccceeeEEEc---CHHH------------------HHHHHH-HhhcccCCCchHHHHHHH
Q 014172 287 LPGMWERTLTVNGFSKAFAMTGWRLGYIAG---PKHF------------------VAACNK-IQSQFTSGASSISQKAGV 344 (429)
Q Consensus 287 ~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~---~~~~------------------~~~l~~-~~~~~~~~~~~~~q~aa~ 344 (429)
..+.++++.|+||.++.+|..+|.+++ +..+ +..+.. .........+.+....+.
T Consensus 216 ---~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l 292 (430)
T 3ri6_A 216 ---RLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQS 292 (430)
T ss_dssp ---GGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHH
T ss_pred ---HcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 134569999999999866655555443 2112 222221 222333334444433332
Q ss_pred HHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCcee-ecCC----------------ceEEEEEecCC
Q 014172 345 AALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM-SEPQ----------------GAFYLFIDFST 398 (429)
Q Consensus 345 ~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~-~~p~----------------~~~~~~~~l~~ 398 (429)
.. .+.+....++..+++..+.+.|++.|+++. ..|. ||+.+|+.++.
T Consensus 293 ~~-------l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~ 356 (430)
T 3ri6_A 293 LG-------LETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELES 356 (430)
T ss_dssp HH-------HHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS
T ss_pred hh-------hhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECC
Confidence 22 344566667778888999999999888764 3444 67468999863
No 204
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.93 E-value=7e-25 Score=219.39 Aligned_cols=258 Identities=15% Similarity=0.179 Sum_probs=188.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcC-CCCCChHHHHH----------HcCCEEE
Q 014172 136 ELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPA-PFWVSYPEMAR----------IADATPV 204 (429)
Q Consensus 136 ~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~-p~y~~~~~~~~----------~~g~~~~ 204 (429)
..++++++++.+.+|......+++++ |+++++..++.+++++||+|++++ |.|..+...+. ..|++++
T Consensus 65 ~~~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~ 143 (431)
T 3ht4_A 65 IGRDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYN 143 (431)
T ss_dssp HHHHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEE
T ss_pred hhHHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEE
Confidence 45777777777777754322233355 668999999999999999999998 99999987654 4799999
Q ss_pred EecCCCCCCCCCCHHHHHhhcccCCcEEEEc-CCCCCccCCCCHHHHHHHHHHHHh--CCCeEEEEccCCcccccCCCCC
Q 014172 205 ILPTRISENFLLDPKVLESKLTEKSRLLILC-SPSNPTGSVYPKNLLDEIARIVAK--HPRLLVLSDEIYEHIIYAPATH 281 (429)
Q Consensus 205 ~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~-~p~NPtG~~~~~~~l~~I~~~a~~--~~~i~vi~Deay~~~~~~~~~~ 281 (429)
.++.++ ++.+|+++|++++++++++|+++ +||||+|.+.+.+++++|+++|++ | |+++|+|++|..+.++.. +
T Consensus 144 ~v~~~~--~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~-~~~livDea~~~~~~~~~-~ 219 (431)
T 3ht4_A 144 AVPLTE--GGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKP-DVVVFVDNCYGEFIEEQE-P 219 (431)
T ss_dssp ECCBCT--TSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCT-TCEEEEECTTCTTSSSCC-G
T ss_pred EeCCCC--CCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCC-CCEEEEeCCChhhccCCC-c
Confidence 999864 36799999999999999999998 699999999999999999999999 9 999999999998765432 1
Q ss_pred CccccCCCCCCceEEEeccChhccc-ccceeeEEEcCHHHHHHHHHHhhcccCC----CchHHHHHHHHHHhcCCCChHH
Q 014172 282 TSFASLPGMWERTLTVNGFSKAFAM-TGWRLGYIAGPKHFVAACNKIQSQFTSG----ASSISQKAGVAALGLGYAGGEV 356 (429)
Q Consensus 282 ~~~~~~~~~~~~~i~~~S~SK~~~~-~G~R~G~v~~~~~~~~~l~~~~~~~~~~----~~~~~q~aa~~~l~~~~~~~~~ 356 (429)
.. .+.+++++||||.+|. .+...||+++++++++.+.........+ ++.....++...+ +.
T Consensus 220 ---~~----~g~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l-------~~ 285 (431)
T 3ht4_A 220 ---CH----VGADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGF-------FL 285 (431)
T ss_dssp ---GG----TTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHH-------HH
T ss_pred ---cc----cCCeEEEcCccccCCCCCCCceEEEEecHHHHHHHHHHhccCCcccccCccHHHHHHHHhHh-------hh
Confidence 11 2345999999999752 1234499999999999987754332221 2111122333333 23
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCceeecC----CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhC
Q 014172 357 VSKMVKAFRERRDFLVKSFGELEGVKMSEP----QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKA 424 (429)
Q Consensus 357 ~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~ 424 (429)
+..+.++..++++++.+.|+++ |+++.+. ..+..+.+.+++. ....+|++.|.+..
T Consensus 286 ~~~~~~~~~~~a~~l~~~L~~~-g~~v~p~~~~~~~~li~~i~l~~~-----------~~~~~~~~~l~~~~ 345 (431)
T 3ht4_A 286 APHVAGQALKGAIFTAAFLEKL-GMNTSPAWNAPRTDLIQSVQFDDK-----------DRMIAFCQAIQYAS 345 (431)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TCCEESCTTSCCSSSCCEEECCCH-----------HHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-cCEecCCCCCCCccEEEEEEeCCH-----------HHHHHHHHHHHhcC
Confidence 4566777888889999999987 6666432 2223455666532 24668888887654
No 205
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.93 E-value=2e-24 Score=219.95 Aligned_cols=291 Identities=11% Similarity=0.058 Sum_probs=210.8
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCC-------CCcEEEecChHHHHHHHHHHhcCC----
Q 014172 110 PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYT-------PDQILVSNGAKQSILQAVLAVCSP---- 178 (429)
Q Consensus 110 p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~-------~~~i~~t~G~~~al~~~l~~l~~~---- 178 (429)
|..+.+.+...+......|...++..++++++++++.+.+|.+.+ ..++++|+|+|+++..++.++.++
T Consensus 87 ~~~~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~ 166 (486)
T 1js3_A 87 PAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRR 166 (486)
T ss_dssp HHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhh
Confidence 556777888777655556766667789999999999999996532 246899999999999888776431
Q ss_pred -----CC--------E--EEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCc------EEEEcCC
Q 014172 179 -----GD--------E--VIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSR------LLILCSP 237 (429)
Q Consensus 179 -----gd--------~--Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~------~i~l~~p 237 (429)
|| . |+++.++|.++...++..|++++.+|++ +++.+|+++|+++++++++ +|++++|
T Consensus 167 ~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d--~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~ 244 (486)
T 1js3_A 167 LQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVVATLG 244 (486)
T ss_dssp HHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBS
T ss_pred hhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecC--CCCCCCHHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 43 3 7889999999999999999999999985 4678999999999986553 7888999
Q ss_pred CCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCc-cccCCCCCCceEEEeccChhcccccceeeEEEc
Q 014172 238 SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS-FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG 316 (429)
Q Consensus 238 ~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~-~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~ 316 (429)
+||||.+-+ +++|+++|++| |+++++|++|+.+.+....... +..+ .+...++.+++|.++++ +++||+++
T Consensus 245 ~n~tG~~~~---l~~I~~la~~~-~~~lhvD~a~g~~~~~~~~~~~~~~g~---~~adsi~~~~hK~~~~p-~~~G~l~~ 316 (486)
T 1js3_A 245 TTSCCSFDN---LLEVGPICHEE-DIWLHVDAAYAGSAFICPEFRHLLNGV---EFADSFNFNPHKWLLVN-FDCSAMWV 316 (486)
T ss_dssp CTTTCCBCC---HHHHHHHHHHT-TCEEEEECTTGGGGGGSTTTGGGGTTG---GGCSEEEECHHHHSSCC-SSCEEEEE
T ss_pred CCCCCCCCC---HHHHHHHHHHc-CCEEEEehhhHHHHHHCHHHHHHhcCc---cccCeeEEchhhhcCCC-cceEEEEE
Confidence 999999977 99999999999 9999999999976543211111 1112 12235668899999855 89999998
Q ss_pred CHH-H-HHHHHH---Hhhc-----------------ccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHH
Q 014172 317 PKH-F-VAACNK---IQSQ-----------------FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKS 374 (429)
Q Consensus 317 ~~~-~-~~~l~~---~~~~-----------------~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~ 374 (429)
+++ . .+.+.. .... .+.....+.+.++...+. .++++++.+++.++++++.+.
T Consensus 317 ~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g-----~~g~~~~~~~~~~~a~~l~~~ 391 (486)
T 1js3_A 317 KRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYG-----VKGLQAYIRKHVQLSHEFEAF 391 (486)
T ss_dssp SCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHH
T ss_pred eCHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHH
Confidence 644 2 333210 0000 000123455555555543 567888999999999999999
Q ss_pred hccCCCceee-cCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCe
Q 014172 375 FGELEGVKMS-EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQV 426 (429)
Q Consensus 375 L~~l~g~~~~-~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV 426 (429)
|+++||+++. +|+.++++| .++.. . ....++.++|.+++.+
T Consensus 392 L~~~~~~~~~~~~~~~~v~f-~~~~~-~---------~~~~~l~~~L~~~g~~ 433 (486)
T 1js3_A 392 VLQDPRFEVCAEVTLGLVCF-RLKGS-D---------GLNEALLERINSARKI 433 (486)
T ss_dssp HHHCTTEEECSCCCSSEEEE-EESSC-H---------HHHHHHHHHHHHHTSC
T ss_pred HhcCCCeEEeCCCceeEEEE-EecCh-H---------HHHHHHHHHHHhcCCE
Confidence 9998899886 467776554 55421 0 0257899998887434
No 206
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.92 E-value=1.2e-24 Score=216.85 Aligned_cols=252 Identities=11% Similarity=0.082 Sum_probs=183.6
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCcEEE---ecChHHHHHHHHHHhcCCCCEEEEcC-CCCCChHHH-----------H
Q 014172 132 AGTLELRSAICHKLKEENGLSYTPDQILV---SNGAKQSILQAVLAVCSPGDEVIIPA-PFWVSYPEM-----------A 196 (429)
Q Consensus 132 ~G~~~lr~~ia~~l~~~~g~~~~~~~i~~---t~G~~~al~~~l~~l~~~gd~Vlv~~-p~y~~~~~~-----------~ 196 (429)
.|..+|++.+|+++ | .+..++ ++|+++++..++.++++|||+|++++ |.|.++... +
T Consensus 73 ~~~~~Le~~lA~l~----g----~e~alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l 144 (427)
T 3i16_A 73 IGRDSLDAVYARVF----N----TESALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSL 144 (427)
T ss_dssp HHHHHHHHHHHHHH----T----CSEEEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCT
T ss_pred HHHHHHHHHHHHHh----C----CcceEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHH
Confidence 35566777777765 3 233455 78889999999999999999999999 999988743 4
Q ss_pred HHcCCEEEEecCCCCCCCCCCHHHHHhhcc--cCCcEEEEcC----CCCCccCCCCHHHHHHHHHHHHh--CCCeEEEEc
Q 014172 197 RIADATPVILPTRISENFLLDPKVLESKLT--EKSRLLILCS----PSNPTGSVYPKNLLDEIARIVAK--HPRLLVLSD 268 (429)
Q Consensus 197 ~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~--~~~~~i~l~~----p~NPtG~~~~~~~l~~I~~~a~~--~~~i~vi~D 268 (429)
+..|++++.++++. ++.+|+++++++++ +++|+|++++ |+||||.+.+ +++|+++|++ | |+++++|
T Consensus 145 ~~~G~~~~~v~~~~--~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~d---l~~i~~la~~~~~-g~~livD 218 (427)
T 3i16_A 145 KEFGINYKQVDLKE--DGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIED---IKSIVDCVKNIRK-DIICFVD 218 (427)
T ss_dssp GGGTCEEEECCCCT--TSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHH---HHHHHHHHHHHCT-TSEEEEE
T ss_pred HHcCCEEEEecCcc--CCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHH---HHHHHHHHHHhCC-CCEEEEE
Confidence 56799999999864 34689999999998 7899999998 9999987755 9999999999 9 9999999
Q ss_pred cCCcccccCCCCCCccccCCCCCCceEEEeccChhccccc-ceeeEEEcCHHHHHHHHHHhhcccCC--Cch-HHHHHHH
Q 014172 269 EIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQSQFTSG--ASS-ISQKAGV 344 (429)
Q Consensus 269 eay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~R~G~v~~~~~~~~~l~~~~~~~~~~--~~~-~~q~aa~ 344 (429)
++|..+.+... +. . .+.+++++|+||.+|.+| .+.||+++++++++.+.........+ .+. +. ++.
T Consensus 219 ~a~~~~~~~~~---p~-~----~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~--~a~ 288 (427)
T 3i16_A 219 NCYGEFMDTKE---PT-D----VGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVPGIGGECGSTFG--VVR 288 (427)
T ss_dssp CTTTTTSSSSC---GG-G----GTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTT--CHH
T ss_pred CCCccccccCC---cc-c----cCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcccCccCccCCccHH--HHH
Confidence 99998654321 11 1 245599999999998555 67899999999999988743222211 111 22 122
Q ss_pred HHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCc----eEEEEEecCCccCCcccCCCCCCChHHHHHHH
Q 014172 345 AALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG----AFYLFIDFSTYYGSEAEGFGKIENSESLCRYL 420 (429)
Q Consensus 345 ~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L 420 (429)
.++.. .+.+..++++..+++.++.+.|+++ |+++.+..+ ...+.+.+... ....+|++.|
T Consensus 289 ~~l~g----l~~~~~r~~~~~~~a~~la~~L~~~-g~~V~p~~~~~~~~~i~~i~l~~~-----------~~~~~f~~~l 352 (427)
T 3i16_A 289 SMYQG----LFLAPHISMEALKGAILCSRIMELA-GFEVMPKYDEKRSDIIQSIKFNDK-----------DKLIEFCKGI 352 (427)
T ss_dssp HHHHH----HHHHHHHHHHHHHHHHHHHHHHHHT-TCEEESCTTSCCSSSCEEEECSSH-----------HHHHHHHHHH
T ss_pred HHHHH----HHHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCCCCccEEEEEEECCH-----------HHHHHHHHHH
Confidence 22221 2345677788888999999999998 667653322 22456666432 2456788887
Q ss_pred HHh
Q 014172 421 LDK 423 (429)
Q Consensus 421 l~~ 423 (429)
...
T Consensus 353 ~~~ 355 (427)
T 3i16_A 353 QTG 355 (427)
T ss_dssp HHT
T ss_pred hhc
Confidence 654
No 207
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.92 E-value=1.8e-24 Score=215.51 Aligned_cols=270 Identities=12% Similarity=0.111 Sum_probs=191.0
Q ss_pred HHHHHHHHHHHHc-----C--CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEE---ecChHHHHHHHHHHhcCCCC
Q 014172 111 VLIAEAGINAIRE-----G--FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILV---SNGAKQSILQAVLAVCSPGD 180 (429)
Q Consensus 111 ~~v~~a~~~~~~~-----~--~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~---t~G~~~al~~~l~~l~~~gd 180 (429)
+.|++++.+.... + .+.| +..|..+|++.+|+++ | .+..++ ++|+++++..++.++++|||
T Consensus 47 ~~Vl~a~~~~~~~~~~~~~~~gy~Y-~~~g~~~Le~~lA~l~----g----~e~alv~p~~~sGt~A~~~al~all~pGD 117 (427)
T 3hvy_A 47 LKVLKAFQEERISESHFTNSSGYGY-NDIGRDSLDRVYANIF----N----TESAFVRPHFVNGTHAIGAALFGNLRPND 117 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCT-TCHHHHHHHHHHHHHH----T----CSEEEEETTCCSHHHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHHHHHHHHhcccCcCCCC-CchhHHHHHHHHHHHh----C----CCceEEeCCCCcHHHHHHHHHHHhcCCCC
Confidence 5667776664221 1 1234 2335567777777765 3 234466 78889999999999999999
Q ss_pred EEEEcC-CCCCChHH-----------HHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc--cCCcEEEEcC----CCCCcc
Q 014172 181 EVIIPA-PFWVSYPE-----------MARIADATPVILPTRISENFLLDPKVLESKLT--EKSRLLILCS----PSNPTG 242 (429)
Q Consensus 181 ~Vlv~~-p~y~~~~~-----------~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~--~~~~~i~l~~----p~NPtG 242 (429)
+|++++ |.|.++.. .++..|++++.++. +++.+|+++++++++ +++|+|++++ |+||||
T Consensus 118 ~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~---~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg 194 (427)
T 3hvy_A 118 TMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL---KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSL 194 (427)
T ss_dssp EEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC---BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCC
T ss_pred EEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecC---CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccc
Confidence 999999 99998873 34567999999998 245689999999998 8999999998 999998
Q ss_pred CCCCHHHHHHHHHHHHh--CCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccccc-ceeeEEEcCHH
Q 014172 243 SVYPKNLLDEIARIVAK--HPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKH 319 (429)
Q Consensus 243 ~~~~~~~l~~I~~~a~~--~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~R~G~v~~~~~ 319 (429)
.+.+ +++|+++|++ | |+++++|++|..+.+... +. . .+.+++++|+||.+|.+| .+.||++++++
T Consensus 195 ~v~d---l~~i~~ia~~~~~-g~~livD~a~~~~~~~~~---p~-~----~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~ 262 (427)
T 3hvy_A 195 RIAE---IAEIIKSIREVNE-NVIVFVDNCYGEFVEEKE---PT-D----VGADIIAGSLIKNIGGGIATTGGYIAGKEE 262 (427)
T ss_dssp CHHH---HHHHHHHHHHHCS-SSEEEEECTTCTTTSSSC---GG-G----GTCSEEEEETTSGGGTTTCCSCEEEEECHH
T ss_pred cHHH---HHHHHHHHHHhCC-CCEEEEECCccccccCCC---Cc-c----cCCeEEEECCcccccccccceEEEEEECHH
Confidence 7755 9999999999 8 999999999987654321 11 1 245699999999998444 56799999999
Q ss_pred HHHHHHHHhhcccCC---CchHH-HHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceeecCCc----eEE
Q 014172 320 FVAACNKIQSQFTSG---ASSIS-QKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG----AFY 391 (429)
Q Consensus 320 ~~~~l~~~~~~~~~~---~~~~~-q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~----~~~ 391 (429)
+++.+.........+ .+++. ...+...+ ..+..++++..+++.++.+.|+++ |+++.+..+ ...
T Consensus 263 li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl-------~~~~~r~~~~~~~a~~la~~L~~~-g~~V~p~~~~~~~~li 334 (427)
T 3hvy_A 263 YVTQATFRVTVPGIGGECGSTFGVMRSLYEGL-------FMAPHVTIEAVKGAVFCARIMELA-GFDVLPKYNDKRTDII 334 (427)
T ss_dssp HHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHT-TCEEESCTTSCCSSSE
T ss_pred HHHHHHHHhhcCCcccccCCCHHHHHHHHHhH-------hHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCCCCceEE
Confidence 999988754222211 11122 22222222 334567777888999999999998 667643322 224
Q ss_pred EEEecCCccCCcccCCCCCCChHHHHHHHHHh
Q 014172 392 LFIDFSTYYGSEAEGFGKIENSESLCRYLLDK 423 (429)
Q Consensus 392 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~ 423 (429)
+.+.+.+. ....+|++.|...
T Consensus 335 ~~~~l~~~-----------~~~~~f~~~l~~~ 355 (427)
T 3hvy_A 335 QAIKFNDE-----------KKLIDFIKGIQTA 355 (427)
T ss_dssp EEEECSSH-----------HHHHHHHHHHHHT
T ss_pred EEEeCCCH-----------HHHHHHHHHhccc
Confidence 66666432 2456788877654
No 208
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.92 E-value=8.1e-23 Score=201.96 Aligned_cols=286 Identities=13% Similarity=0.169 Sum_probs=201.1
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh-
Q 014172 97 VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV- 175 (429)
Q Consensus 97 ~i~L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l- 175 (429)
+|++..+.+. .++++.+++.+.+.+. .|.+..+..+++++++++++ .+++++++++++++..++.++
T Consensus 3 ~~~~~~~~~~--~~~~~~~a~~~~~~~~--~~~~~~~~~~l~~~la~~~~--------~~~~i~~~sGt~a~~~al~~~~ 70 (390)
T 3b8x_A 3 MINYPLASST--WDDLEYKAIQSVLDSK--MFTMGEYVKQYETQFAKTFG--------SKYAVMVSSGSTANLLMIAALF 70 (390)
T ss_dssp --CBCSCCCC--CCHHHHHHHHHHHHHT--CCSSCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHTT
T ss_pred ceeccCCCCC--CCHHHHHHHHHHHHcC--CCCCChHHHHHHHHHHHHHC--------CCcEEEECCHHHHHHHHHHHHH
Confidence 4555555443 3678888998888763 46667778899999999974 125777778888999999998
Q ss_pred ------cCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHH
Q 014172 176 ------CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNL 249 (429)
Q Consensus 176 ------~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~ 249 (429)
+++||+|+++.|+|.++...++..|++++.++++++ ++.+|+++|++++++++++|++++ ++|...+
T Consensus 71 ~~~~~~~~~g~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~--- 143 (390)
T 3b8x_A 71 FTKKPRLKKGDEIIVPAVSWSTTYYPLQQYGLRVKFVDIDIN-TLNIDIESLKEAVTDSTKAILTVN---LLGNPNN--- 143 (390)
T ss_dssp SSSSCSCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTT-TCSBCHHHHHHHCCTTEEEEEEEC---GGGCCCC---
T ss_pred hhhhcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCcc-ccCcCHHHHHHHhCcCCeEEEEEC---CccChhh---
Confidence 789999999999999999999999999999998754 477999999999998899998873 5677777
Q ss_pred HHHHHHHHHhCCCeEEEEccCCccc-ccCCCCCCccccCCCCCCceEEEec--cChhcccccceeeEEEcCH-HHHHHHH
Q 014172 250 LDEIARIVAKHPRLLVLSDEIYEHI-IYAPATHTSFASLPGMWERTLTVNG--FSKAFAMTGWRLGYIAGPK-HFVAACN 325 (429)
Q Consensus 250 l~~I~~~a~~~~~i~vi~Deay~~~-~~~~~~~~~~~~~~~~~~~~i~~~S--~SK~~~~~G~R~G~v~~~~-~~~~~l~ 325 (429)
+++|.++|++| |+++|+|++|... .+.+ ..+.. ..++...| .+|.++ +| +.|++++++ ++.+.+.
T Consensus 144 ~~~i~~l~~~~-~~~li~D~a~~~g~~~~~------~~~g~--~~~~~~~s~~~~k~~~-~g-~gG~~~~~~~~l~~~~~ 212 (390)
T 3b8x_A 144 FDEINKIIGGR-DIILLEDNCESMGATFNN------KCAGT--FGLMGTFSSFYSNHIA-TM-EGGCIVTDDEEIYHILL 212 (390)
T ss_dssp HHHHHHHHTTS-CCEEEEECTTCTTCEETT------EETTS--SSSEEEEECCTTSSSC-SS-SCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHc-CCEEEEECcCcccCEECC------ccccc--ccceEEEEccCCCCCc-cC-CceEEEeCCHHHHHHHH
Confidence 99999999999 9999999999853 2221 11111 11233333 245553 33 459999875 6766665
Q ss_pred HHhhcc-------------------------------cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHH
Q 014172 326 KIQSQF-------------------------------TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKS 374 (429)
Q Consensus 326 ~~~~~~-------------------------------~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~ 374 (429)
...... +...+.+...++...+ +++++..++.+++++++.+.
T Consensus 213 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l-------~~l~~~~~~~~~~~~~l~~~ 285 (390)
T 3b8x_A 213 CIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQL-------KKLPRFISVRRKNAEYFLDK 285 (390)
T ss_dssp HHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCccccccccccccccccccccccceeccccccCcCHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHH
Confidence 433111 1114444444444433 34667788888899999999
Q ss_pred hccCCCceeecC--CceE-EEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 375 FGELEGVKMSEP--QGAF-YLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 375 L~~l~g~~~~~p--~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
|++++|+++..+ .+++ .+++.++...+ .+..++.++|.++ ||.++
T Consensus 286 L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------~~~~~l~~~L~~~-gI~v~ 333 (390)
T 3b8x_A 286 FKDHPYLDVQQETGESSWFGFSFIIKKDSG---------VIRKQLVENLNSA-GIECR 333 (390)
T ss_dssp HTTCSSEEECCCCSBCCCCEEEEEECTTSC---------CCHHHHHHHHHHT-TBCCB
T ss_pred hcCCCCcccCCCCCCcccEEEEEEecCcCc---------ccHHHHHHHHHHC-CCCee
Confidence 999888887653 2343 24556652100 2678899888664 88763
No 209
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.92 E-value=3.9e-23 Score=211.34 Aligned_cols=274 Identities=15% Similarity=0.126 Sum_probs=204.0
Q ss_pred hHHHH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcC--------CC-
Q 014172 110 PVLIA-EAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS--------PG- 179 (429)
Q Consensus 110 p~~v~-~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~--------~g- 179 (429)
|..+. +.+...+......|...++..++++++.+++.+.+|.+.+++++++|+|+++++..++.++.+ +|
T Consensus 105 ~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~ 184 (504)
T 2okj_A 105 IIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGM 184 (504)
T ss_dssp HHHHHHHHHHHHHCCBSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCG
T ss_pred HHHHHHHHHHHhhccCCCchhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCc
Confidence 44443 444444444344566666667889999999999999654377999999999999999888753 56
Q ss_pred ----C-EEEEcCCCCCChHHHHHHcCC---EEEEecCCCCCCCCCCHHHHHhhccc------CCcEEEEcCCCCCccCCC
Q 014172 180 ----D-EVIIPAPFWVSYPEMARIADA---TPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVY 245 (429)
Q Consensus 180 ----d-~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~e~l~~~l~~------~~~~i~l~~p~NPtG~~~ 245 (429)
+ .|+++.+.|+++...++..|. +++.+|++ .++.+|++.|++++++ ++++|++++|+||||.+.
T Consensus 185 ~~~~~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~ 262 (504)
T 2okj_A 185 AAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFD 262 (504)
T ss_dssp GGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBC
T ss_pred cccCCeEEEECCcchHHHHHHHHHcCCCcccEEEEecC--CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcC
Confidence 6 799999999999999999887 89999985 3577999999999975 588999999999999998
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCH-HHHHHH
Q 014172 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK-HFVAAC 324 (429)
Q Consensus 246 ~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~-~~~~~l 324 (429)
+ +++|+++|++| |+|+++|++|+.+.+....... .+.+.....+++.+++|.++.+ .++|++++.+ ++++..
T Consensus 263 ~---l~~I~~la~~~-g~~lhvD~a~~~~~~~~~~~~~--~~~g~~~~D~i~~~~hK~~~~p-~~~g~l~~~~~~~~~~~ 335 (504)
T 2okj_A 263 P---IQEIADICEKY-NLWLHVDAAWGGGLLMSRKHRH--KLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGC 335 (504)
T ss_dssp C---HHHHHHHHHHH-TCEEEEEETTGGGGGGCTTTGG--GGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHH
T ss_pred C---HHHHHHHHHHc-CCEEEEehhhhhHHHhCHhhHh--hcCCcccCCEEEECchhhcCCC-cceEEEEEECHHHHHHH
Confidence 8 99999999999 9999999999987653221111 1221123447888999999844 7899999875 465543
Q ss_pred HHHhhcccC---------------------CCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCcee
Q 014172 325 NKIQSQFTS---------------------GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM 383 (429)
Q Consensus 325 ~~~~~~~~~---------------------~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~ 383 (429)
......+.. ....+.+.++..++. .++++++.++..++++++.+.|++++|+++
T Consensus 336 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg-----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 410 (504)
T 2okj_A 336 NQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG-----TVGFENQINKCLELAEYLYAKIKNREEFEM 410 (504)
T ss_dssp HCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHTTCTTEEE
T ss_pred hcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 211111110 013556666666664 456888888999999999999999889988
Q ss_pred ec---CCceEEEEEecC
Q 014172 384 SE---PQGAFYLFIDFS 397 (429)
Q Consensus 384 ~~---p~~~~~~~~~l~ 397 (429)
.. |..++++|..++
T Consensus 411 ~~~~~p~~~~v~f~~~~ 427 (504)
T 2okj_A 411 VFNGEPEHTNVCFWYIP 427 (504)
T ss_dssp SSSSCCSSSCEEEEECC
T ss_pred EecCCCCeEEEEEEEeC
Confidence 74 778887776554
No 210
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.92 E-value=8.2e-24 Score=214.06 Aligned_cols=325 Identities=13% Similarity=0.059 Sum_probs=205.0
Q ss_pred ccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCC-CCCCC------CCCCHHHHHHHH
Q 014172 70 PRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGF-TRYTP------NAGTLELRSAIC 142 (429)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~-~~Y~~------~~G~~~lr~~ia 142 (429)
.+++.+.|..+..+.+..++.. +.|.|-.+++. +++.|++++...+.+.+ .+|.. ..-..+|++...
T Consensus 33 ~~l~~~d~~~~~~~~~e~~rq~----~~i~lias~n~--~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~ 106 (490)
T 2a7v_A 33 ESLSDSDPEMWELLQREKDRQC----RGLELIASENF--CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQ 106 (490)
T ss_dssp CCHHHHCHHHHHHHHHHHHHHH----HSEECCTTCCC--CCHHHHHHHTSGGGTCCCCC------------CTHHHHHHH
T ss_pred chhhhcCHHHHHHHHHHHHHHH----cCceEECCCCC--CCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHH
Confidence 4567777765554444333332 45788776655 58999999988775533 22321 122347776677
Q ss_pred HHHHhhcCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH--------HHHHcCCEEE--EecCCCC
Q 014172 143 HKLKEENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE--------MARIADATPV--ILPTRIS 211 (429)
Q Consensus 143 ~~l~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~--~v~~~~~ 211 (429)
+++.+.+|...+.. ..++++++++++..++.++++|||+|+++++.|.++.. .+...|..+. .+++++
T Consensus 107 ~~~a~l~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~- 185 (490)
T 2a7v_A 107 RRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNP- 185 (490)
T ss_dssp HHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCT-
T ss_pred HHHHHHcCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEeccccc-
Confidence 88888888432111 23555678999999999999999999999998876432 2345565444 444443
Q ss_pred CCCCCCHHHHHhhcc-cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCc-ccccCCCCCCccccCCC
Q 014172 212 ENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE-HIIYAPATHTSFASLPG 289 (429)
Q Consensus 212 ~~~~~d~e~l~~~l~-~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~-~~~~~~~~~~~~~~~~~ 289 (429)
+++.+|+++|++.+. .++|+|+++.++||+ ..+ +++|.++|++| |+++++|++|. ++++.+..+.++ .
T Consensus 186 ~~~~iD~d~le~~l~~~~~klIi~~~s~~~~--~~d---l~~i~~ia~~~-g~~livD~Ah~~glv~~g~~~~~~-~--- 255 (490)
T 2a7v_A 186 KTGLIDYNQLALTARLFRPRLIIAGTSAYAR--LID---YARMREVCDEV-KAHLLADMAHISGLVAAKVIPSPF-K--- 255 (490)
T ss_dssp TTCSBCHHHHHHHHHHHCCSEEEECCSSCCS--CCC---HHHHHHHHHHT-TCEEEEECGGGHHHHHTTSSCCGG-G---
T ss_pred ccCCcCHHHHHHHHhhcCCcEEEEcCCCCCC--ccc---HHHHHHHHHHc-CCEEEEccccccccccCCcCCCCC-C---
Confidence 346799999999986 478999989899875 556 89999999999 99999999975 444444322222 1
Q ss_pred CCCceEEEeccChhcccccceeeEEEcCHH---------------HHHHHHHHhhcccCC-CchHHHHHHHHHHhcCCCC
Q 014172 290 MWERTLTVNGFSKAFAMTGWRLGYIAGPKH---------------FVAACNKIQSQFTSG-ASSISQKAGVAALGLGYAG 353 (429)
Q Consensus 290 ~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~---------------~~~~l~~~~~~~~~~-~~~~~q~aa~~~l~~~~~~ 353 (429)
...+++.|+||++ .|+|.|+++++++ +.+.+.+.......+ ++.....++..++... .
T Consensus 256 --~aDiv~~S~hK~l--~Gp~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~--~ 329 (490)
T 2a7v_A 256 --HADIVTTTTHKTL--RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQA--C 329 (490)
T ss_dssp --TCSEEEEESSGGG--CSCSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHH--H
T ss_pred --CCCEEEECCcccC--ccccchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHH--h
Confidence 2348899999998 4788899998764 556666554443333 3433344444455431 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCCceeec-CCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 354 GEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 354 ~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~-p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
.+..++..+++.++++++.+.|.+. |+++.. +..++++|+++... + .+..++.+. |++.||.++
T Consensus 330 ~~~~~~~~~~~~~na~~L~~~L~~~-G~~v~~~~t~t~lv~vdl~~~-g---------~~~~~~~~~-L~~~GI~v~ 394 (490)
T 2a7v_A 330 TPMFREYSLQVLKNARAMADALLER-GYSLVSGGTDNHLVLVDLRPK-G---------LDGARAERV-LELVSITAN 394 (490)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECTTT-T---------CCHHHHHHH-HHHTTEECE
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCCCeEEEEEeCCC-C---------CCHHHHHHH-HHhCCeEEe
Confidence 2345778888999999999999997 898864 34567799998642 1 256665555 466799874
No 211
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.92 E-value=2.7e-23 Score=212.75 Aligned_cols=304 Identities=14% Similarity=0.114 Sum_probs=217.8
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcC------------
Q 014172 110 PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS------------ 177 (429)
Q Consensus 110 p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~------------ 177 (429)
|..+.+.+..++......|...++..++++++++|+.+.+|.+.++..+++|+|+++++..++.++.+
T Consensus 109 ~~~~~e~l~~~~~~~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~ 188 (511)
T 3vp6_A 109 IGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMA 188 (511)
T ss_dssp HHHHHHHHHHHHCCCSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGG
T ss_pred HHHHHHHHHHHhccCCCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcc
Confidence 45566777777776667888888889999999999999999765567999999999999988888754
Q ss_pred --CCCEEEEcCCCCCChHHHHHHcCC---EEEEecCCCCCCCCCCHHHHHhhcccC------CcEEEEcCCCCCccCCCC
Q 014172 178 --PGDEVIIPAPFWVSYPEMARIADA---TPVILPTRISENFLLDPKVLESKLTEK------SRLLILCSPSNPTGSVYP 246 (429)
Q Consensus 178 --~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~e~l~~~l~~~------~~~i~l~~p~NPtG~~~~ 246 (429)
+++.|+++.++|.++...++..|+ +++.++++ .++.+|+++|+++++++ +++|++++|+||||.+-+
T Consensus 189 ~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~ 266 (511)
T 3vp6_A 189 AVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP 266 (511)
T ss_dssp GSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCC
T ss_pred cCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecC--CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccccc
Confidence 567999999999999999999998 89999986 34779999999999764 788999999999999977
Q ss_pred HHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCH-HHHHHHH
Q 014172 247 KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK-HFVAACN 325 (429)
Q Consensus 247 ~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~-~~~~~l~ 325 (429)
+++|+++|++| |+|+++|++|+........... .+.+.....+++.+++|+++.+ ..+|+++..+ ++++...
T Consensus 267 ---l~~I~~ia~~~-~~~lhvD~a~~~~~~~~~~~~~--~~~g~~~aDsv~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~ 339 (511)
T 3vp6_A 267 ---IQEIADICEKY-NLWLHVDAAWGGGLLMSRKHRH--KLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCN 339 (511)
T ss_dssp ---HHHHHHHHHHH-TCEEEEEETTGGGGGGCTTTGG--GGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHH
T ss_pred ---HHHHHHHHHHc-CCEEEEEccchhhHhhChhhhh--hccCCccCCEEEECcccccCCC-cCeEEEEEeCHHHHHHHh
Confidence 99999999999 9999999999975542211111 1111123357788999999744 6688887754 4454432
Q ss_pred HHhhccc-----------------C----CCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceee
Q 014172 326 KIQSQFT-----------------S----GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (429)
Q Consensus 326 ~~~~~~~-----------------~----~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~ 384 (429)
.....+. . ....+...++..++ +.++++++.++..++.+++.+.|+++||+++.
T Consensus 340 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~-----g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~ 414 (511)
T 3vp6_A 340 QMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAK-----GTVGFENQINKCLELAEYLYAKIKNREEFEMV 414 (511)
T ss_dssp CCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHSCTTEEES
T ss_pred ccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 2111000 0 01233344444444 25788999999999999999999999999987
Q ss_pred c---CCceEEEEEecCCccCCcccCC----CCCCChHHHHHHHHHhCCee
Q 014172 385 E---PQGAFYLFIDFSTYYGSEAEGF----GKIENSESLCRYLLDKAQVL 427 (429)
Q Consensus 385 ~---p~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~Ll~~~gV~ 427 (429)
. |..++.+|--.|........+. .......++.++|++++.+.
T Consensus 415 ~~~~p~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~ 464 (511)
T 3vp6_A 415 FNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTM 464 (511)
T ss_dssp SSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCE
T ss_pred ecCCCCeEEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEE
Confidence 5 6667655433333210000000 00001346888888885443
No 212
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.92 E-value=4.6e-23 Score=204.51 Aligned_cols=214 Identities=14% Similarity=0.184 Sum_probs=165.9
Q ss_pred CHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH-----HHHcCCEEEEecC
Q 014172 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM-----ARIADATPVILPT 208 (429)
Q Consensus 134 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~-----~~~~g~~~~~v~~ 208 (429)
..+|++.++++. | .+++++++++++++.. +..++++||+|++++|+|.+.... ++..|++++.++.
T Consensus 69 ~~~l~~~la~l~----g----~~~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~ 139 (400)
T 3nmy_A 69 RFAYERCVAALE----G----GTRAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDL 139 (400)
T ss_dssp HHHHHHHHHHHH----T----CSEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECT
T ss_pred HHHHHHHHHHHh----C----CCCEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECC
Confidence 345666666654 4 2367777777999997 677889999999999999965544 3446999999986
Q ss_pred CCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCC
Q 014172 209 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 288 (429)
Q Consensus 209 ~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~ 288 (429)
+ |++.+++++++++++|++++|+||||.+++ +++|.++|++| |+++|+|++|....+.. ++ .
T Consensus 140 ~-------d~~~l~~~i~~~~~~v~~e~~~np~G~~~~---l~~i~~la~~~-g~~livDe~~~~~~~~~----~~-~-- 201 (400)
T 3nmy_A 140 T-------DPAAFKAAIRADTKMVWIETPTNPMLKLVD---IAAIAVIARKH-GLLTVVDNTFASPMLQR----PL-S-- 201 (400)
T ss_dssp T-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHT-TCEEEEECTTTHHHHCC----GG-G--
T ss_pred C-------CHHHHHHHhccCCCEEEEECCCCCCCeeec---HHHHHHHHHHc-CCEEEEECCCcccccCC----hh-h--
Confidence 3 899999999999999999999999999998 99999999999 99999999998543221 11 1
Q ss_pred CCCCceEEEeccChhcccccceeeE--EE-cCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 014172 289 GMWERTLTVNGFSKAFAMTGWRLGY--IA-GPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFR 365 (429)
Q Consensus 289 ~~~~~~i~~~S~SK~~~~~G~R~G~--v~-~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~ 365 (429)
.+.++++.|++|.++.+|.++|+ ++ .++++++.+.......+.+.+.+...++...++. +....++..
T Consensus 202 --~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~-------l~~r~~~~~ 272 (400)
T 3nmy_A 202 --LGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSFLALRGLKT-------LPLRMRAHC 272 (400)
T ss_dssp --GTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTT-------HHHHHHHHH
T ss_pred --cCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhH-------HHHHHHHHH
Confidence 24569999999999878878765 33 4778888888777666666777776666665543 445566678
Q ss_pred HHHHHHHHHhccCCCcee
Q 014172 366 ERRDFLVKSFGELEGVKM 383 (429)
Q Consensus 366 ~~r~~l~~~L~~l~g~~~ 383 (429)
++...+.+.|++.|.+..
T Consensus 273 ~~a~~l~~~L~~~p~v~~ 290 (400)
T 3nmy_A 273 ENALALAQWLETHPAIEK 290 (400)
T ss_dssp HHHHHHHHHHTTCTTEEE
T ss_pred HHHHHHHHHHHcCCCEeE
Confidence 888889999988877654
No 213
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.92 E-value=2.5e-24 Score=216.80 Aligned_cols=256 Identities=14% Similarity=0.138 Sum_probs=172.8
Q ss_pred CCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCC
Q 014172 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR 209 (429)
Q Consensus 130 ~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~ 209 (429)
+.....++++.+++ + |. + +++++|+|+++++..++++++++||+|++++|+|.++...+...|++++.++..
T Consensus 55 ~~~~~~~~~~~la~-~----g~--~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~ 126 (446)
T 2x3l_A 55 PEEVILKSMKQVEK-H----SD--Y-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFIETH 126 (446)
T ss_dssp CSSHHHHHHHHHCS-C----TT--E-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEECEEE
T ss_pred cchHHHHHHHHHHh-c----CC--C-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEEeCe
Confidence 44444566666665 4 42 2 689999999999999999999999999999999999999999999999999873
Q ss_pred CCCC----CCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcc-cccCCCCCCcc
Q 014172 210 ISEN----FLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPATHTSF 284 (429)
Q Consensus 210 ~~~~----~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~-~~~~~~~~~~~ 284 (429)
.+++ +.+|++.| +.+++++|++++ +|+||.+++ +++|.++|++| |+++|+||+|+. +.|.+. +.+.
T Consensus 127 ~~~~~~~~~~~d~~~l---~~~~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~-~~~livDea~~~~~~f~~~-~~~~ 197 (446)
T 2x3l_A 127 QSPLTNHYNKVNLSRL---NNDGHKLVVLTY-PNYYGETFN---VEEVIKSLHQL-NIPVLIDEAHGAHFGLQGF-PDST 197 (446)
T ss_dssp ECTTTSSEEEEEC----------CCEEEEES-SCTTSCCCC---HHHHHHHHHHT-TCCEEEECTTCTTTTSTTS-CCCG
T ss_pred eccccCcCCCCCHHHH---cCCCceEEEEEC-CCCCeEecC---HHHHHHHHHhc-CCeEEEcchhhhhhccCCC-CCCh
Confidence 2222 45788887 567899999998 556999999 89999999999 999999999996 445543 3333
Q ss_pred ccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHH--HHHHHhhcccC-CCchHHHHHHHHHHhcCCCChHH-HHHH
Q 014172 285 ASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVA--ACNKIQSQFTS-GASSISQKAGVAALGLGYAGGEV-VSKM 360 (429)
Q Consensus 285 ~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~--~l~~~~~~~~~-~~~~~~q~aa~~~l~~~~~~~~~-~~~~ 360 (429)
..+ +..+++.|+||.++ ++.++||+++++++++ .+......+.. +++.....++.++++. ..++ .+++
T Consensus 198 ~~~----g~Di~~~S~~K~l~-~~~g~g~l~~~~~~i~~~~~~~~~~~~~~~s~~~~~~aal~~a~~~---l~~~g~~~~ 269 (446)
T 2x3l_A 198 LNY----QADYVVQSFHKTLP-ALTMGSVLYIHKNAPYRENIIEYLSYFQTSSPSYLIMASLESAAQF---YKTYDSTLF 269 (446)
T ss_dssp GGG----TCSEEEECHHHHSS-SCTTCEEEEEETTCTTHHHHHHHHHHHSCSSCCHHHHHHHHHHHHH---HHHCCCHHH
T ss_pred HHc----CCCEEEECCccccc-cccccEEEEEcCCcCCHHHHHHHHHHHcCCCchHHHHHHHHHHHHH---HHHhCHHHH
Confidence 332 23499999999764 4455899999877654 33322222222 3333333333233321 0110 1124
Q ss_pred HHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 361 VKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 361 ~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.++.++.++.+.+. |+++..+..+.++|+++++ .+..++++.|.++ ||.+
T Consensus 270 ~~~~~~l~~~l~~~-----g~~~~~~~~~~~l~i~~~~------------~~~~~l~~~L~~~-GI~v 319 (446)
T 2x3l_A 270 FAKRAQLIECLENK-----GFEMLQVDDPLKLLIKYEG------------FTGHDIQNWFMNA-HIYL 319 (446)
T ss_dssp HHHHHHHHHHHHHH-----TCEEEECSSTTEEEEECTT------------SCHHHHHHHHHHT-TEEE
T ss_pred HHHHHHHHHHHHHc-----CCEECcCCCCeEEEEEeCC------------cCHHHHHHHHHHC-CCEE
Confidence 44444555555554 6777666555679998873 2678999998887 9976
No 214
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.91 E-value=6.3e-24 Score=214.55 Aligned_cols=261 Identities=13% Similarity=0.115 Sum_probs=191.1
Q ss_pred CHHHHHHHHHHHHhhcCCCCCCCcEEEecChH-HHHHHHHHHhcC--CCCEEEEcCCCCCChHHHHHHcCCEEEEecCCC
Q 014172 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAK-QSILQAVLAVCS--PGDEVIIPAPFWVSYPEMARIADATPVILPTRI 210 (429)
Q Consensus 134 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~-~al~~~l~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~ 210 (429)
..++.+++.+++.+.+|. +++ +++|+|++ .++..++.++.. +|+.|+++.+.|+++...++..|++++.+++.+
T Consensus 131 ~~~~~~~~~~~la~~~g~--~~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~ 207 (456)
T 2z67_A 131 MYALTNKILESFFKQLGL--NVH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVL 207 (456)
T ss_dssp HHHHHHHHHHHHHHHTTC--CCE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEE
T ss_pred HHHHHHHHHHHHHHHcCC--CCC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEec
Confidence 456778888888888885 334 99999999 455545555443 678899999999999999999999999998743
Q ss_pred -CCCCCCCHHHHHhhc-c----cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCcc
Q 014172 211 -SENFLLDPKVLESKL-T----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF 284 (429)
Q Consensus 211 -~~~~~~d~e~l~~~l-~----~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~ 284 (429)
++++.+|+++|++++ + .++.+|++++|+||||.+.+ +++|.++|++| |+++++|++|+.+.++- .+...
T Consensus 208 ~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~---l~~I~~la~~~-g~~v~vD~A~~~~~~g~-~~~~~ 282 (456)
T 2z67_A 208 DGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD---IVEIAKICENY-DIPHIINGAYAIQNNYY-LEKLK 282 (456)
T ss_dssp ETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC---HHHHHHHHHHH-TCCEEEECTTTTTCHHH-HHHHH
T ss_pred cCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCC---HHHHHHHHHHc-CCcEEEECcchHHHHHh-hHHHH
Confidence 345779999999999 5 36777788999999999999 99999999999 99999999998754321 00011
Q ss_pred ccCCCCCCceEEEeccChhcccccceeeEEEc-CHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHH
Q 014172 285 ASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (429)
Q Consensus 285 ~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~-~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~ 363 (429)
..+.. +..+++.|++|.++ .++++||+++ ++++++.+.........+.+.+.+.+++..+. .++++++.++
T Consensus 283 ~~~~~--~~D~~~~s~hK~~~-~p~g~G~l~~~~~~~~~~l~~~~~g~~~~~~~~~~~aal~~l~-----~~~~~~~~~~ 354 (456)
T 2z67_A 283 KAFKY--RVDAVVSSSDKNLL-TPIGGGLVYSTDAEFIKEISLSYPGRASATPVVNTLVSLLSMG-----SKNYLELVKN 354 (456)
T ss_dssp HHHTS--CCSEEEEEHHHHHC-CCSSCEEEEESCHHHHHHHHTTSCSCBCSHHHHHHHHHHHHHH-----HHHHHHHHHH
T ss_pred HhhCC--CCCEEEEcCCCCcC-CCCCeEEEEEcCHHHHhhcCcCCCCCCCCCHHHHHHHHHHHHH-----HHHHHHHHHH
Confidence 11111 23377899999765 6789999999 57787776432221111223444444444443 4678888999
Q ss_pred HHHHHHHHHHHhccCC---CceeecCCceEEEEEec--CCccCCcccCCCCCCChHHHHHHHHHhCCe
Q 014172 364 FRERRDFLVKSFGELE---GVKMSEPQGAFYLFIDF--STYYGSEAEGFGKIENSESLCRYLLDKAQV 426 (429)
Q Consensus 364 ~~~~r~~l~~~L~~l~---g~~~~~p~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV 426 (429)
++++++++.+.|++++ |+.+..|+ ++ +++++ +. ...+++++|.++ ||
T Consensus 355 ~~~~~~~l~~~L~~~~~~~g~~v~~~~-~~-v~~~~~~~~-------------~~~~l~~~L~~~-gi 406 (456)
T 2z67_A 355 QKNSKKLLDELLNDLSKKTGGKFLDVE-SP-IASCISVNS-------------DPVEIAAKLYNL-RV 406 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCBCCCC-CS-SEEEEECSS-------------CHHHHHHHHHHT-TE
T ss_pred HHHHHHHHHHHHHhcccccCCEecCCC-Ce-EEEEEeccc-------------HHHHHHHHHHHc-CC
Confidence 9999999999999886 77777777 44 56666 31 246888888876 54
No 215
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.91 E-value=1.9e-23 Score=209.85 Aligned_cols=305 Identities=17% Similarity=0.200 Sum_probs=199.4
Q ss_pred HHHHHHHHHHhcCCC--eEEcCCCCCCCCChHHHHHHHH--HHHHcCCCCCCC--CCCCHHHHHHHHHHHHhhcCCCCCC
Q 014172 82 AITDQATALAQAGVS--VIRLAAGEPDFDTPVLIAEAGI--NAIREGFTRYTP--NAGTLELRSAICHKLKEENGLSYTP 155 (429)
Q Consensus 82 ~~~~~~~~~~~~g~~--~i~L~~g~~~~~~p~~v~~a~~--~~~~~~~~~Y~~--~~G~~~lr~~ia~~l~~~~g~~~~~ 155 (429)
++.+....+...+.. ...++.|.++...|+.+.+.+. +.+.. .+.|.+ .+|..++.+.+.+++.+.+|. ++
T Consensus 49 ~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~p~~v~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~la~~~g~--~~ 125 (438)
T 1wyu_A 49 KVLEELRRLAAQNLPAHKAFLGGGVRSHHVPPVVQALAARGEFLTA-YTPYQPEVSQGVLQATFEYQTMIAELAGL--EI 125 (438)
T ss_dssp HHHHHHHHHHHTSCCCTTCCCCSSCCCCCCCHHHHHHHTSHHHHHC-CSCCSGGGCHHHHHHHHHHHHHHHHHHTS--SE
T ss_pred HHHHHHHHHHhcCcCccccccCCCccCCcCcHHHHHHHhcchhhhc-CCCCcchhhhhHHHHHHHHHHHHHHHhCC--Cc
Confidence 444555555554432 4578888888777877644442 22221 222321 456667777777777777774 56
Q ss_pred CcEEEecChHHHHHHHHHH-hcCCCCEEEEcCCCCCChHHHH----HHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCc
Q 014172 156 DQILVSNGAKQSILQAVLA-VCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTRISENFLLDPKVLESKLTEKSR 230 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~-l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~ 230 (429)
+++++++|++.+++.++.+ .+++||+|+++.++|+.+...+ +..|++++.++. + ++.+|+++ ++++++
T Consensus 126 ~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~--~-~~~~d~~~----i~~~t~ 198 (438)
T 1wyu_A 126 ANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL--E-GGRTPLPE----VGEEVG 198 (438)
T ss_dssp ECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC--B-TTBCCCCC----CCTTEE
T ss_pred cceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC--c-CCccCHHH----hCCCeE
Confidence 7889999999444433333 2478999999999999988655 458999999997 2 34678776 677899
Q ss_pred EEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccC---CcccccCCCCCCccccCCCCCCceEEEeccChhc---
Q 014172 231 LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI---YEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF--- 304 (429)
Q Consensus 231 ~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Dea---y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~--- 304 (429)
+|++++| ||||.+.+ +++|+++|++| |+++|+|.. |+.+ . .... .+..+++.| +|.|
T Consensus 199 ~v~i~~p-n~tG~~~~---l~~i~~la~~~-g~~vivd~d~~a~g~~-----~--~~~~----~g~D~~~~s-~kk~~~~ 261 (438)
T 1wyu_A 199 AVVVQNP-NFLGALED---LGPFAEAAHGA-GALFVAVADPLSLGVL-----K--PPGA----YGADIAVGD-GQSLGLP 261 (438)
T ss_dssp EEEEESS-CTTSBCCC---HHHHHHHHHHT-TCEEEEECCTTGGGTB-----C--CHHH----HTCSEEEEE-CTTTTCC
T ss_pred EEEEECC-CCCeEEec---HHHHHHHHHHc-CCEEEEEechhhccCc-----C--CCcc----CCCCEEEEC-CcccCCC
Confidence 9999999 99999998 99999999999 999996622 3221 1 1111 233466666 6654
Q ss_pred -ccccceeeEEEcCHHHHHHHHHH-------------------------h-hcccCCC---chHHHHHHHHHHhcCCCCh
Q 014172 305 -AMTGWRLGYIAGPKHFVAACNKI-------------------------Q-SQFTSGA---SSISQKAGVAALGLGYAGG 354 (429)
Q Consensus 305 -~~~G~R~G~v~~~~~~~~~l~~~-------------------------~-~~~~~~~---~~~~q~aa~~~l~~~~~~~ 354 (429)
++.|+|+||+++++++++.+... + ...+.+. +.....++...+... ..
T Consensus 262 ~~~~Gp~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~--~~ 339 (438)
T 1wyu_A 262 MGFGGPHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAAL--GP 339 (438)
T ss_dssp CGGGCSCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHH--HH
T ss_pred ccCCCCCeeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHh--CH
Confidence 46678999999998876654110 0 0111111 122222112113210 24
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 355 EVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 355 ~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
+.++++.++++++++++.+.|++++|+++..+. ++|.++.+... .+..+++++|.++ ||.+
T Consensus 340 ~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~~~~~~~~~~~-----------~~~~~~~~~L~~~-gi~v 400 (438)
T 1wyu_A 340 EGLREVALKSVEMAHKLHALLLEVPGVRPFTPK-PFFNEFALALP-----------KDPEAVRRALAER-GFHG 400 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCS-SBCSEEEEECS-----------SCHHHHHHHHHHT-TCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCC-CeEEEEEEeCC-----------CCHHHHHHHHHHC-Ccee
Confidence 568888999999999999999999899987654 34433333211 2678999999876 8876
No 216
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.90 E-value=4e-22 Score=202.65 Aligned_cols=294 Identities=14% Similarity=0.097 Sum_probs=214.8
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCC--------CcEEEecChHHHHHHHHHHhcC----
Q 014172 110 PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTP--------DQILVSNGAKQSILQAVLAVCS---- 177 (429)
Q Consensus 110 p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~--------~~i~~t~G~~~al~~~l~~l~~---- 177 (429)
|..+.+.+..++......|...++..++++.+++++.+.+|.+... ...++|+|+|+++..++.+..+
T Consensus 92 ~~~~~~~~~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~ 171 (481)
T 4e1o_A 92 PSLLGDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKIL 171 (481)
T ss_dssp HHHHHHHHHHHHCCCCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHH
Confidence 5666777777777666788888889999999999999999965322 3679999999999888877642
Q ss_pred ---------------CCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccC------CcEEEEcC
Q 014172 178 ---------------PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEK------SRLLILCS 236 (429)
Q Consensus 178 ---------------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~------~~~i~l~~ 236 (429)
+++.|+++.++|.++...++..|++++.+|++ .++.+|+++|+++++++ +.+|+++.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~ 249 (481)
T 4e1o_A 172 EMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVD--DNFSLRGEALQKAIEEDKQRGLVPVFVCATL 249 (481)
T ss_dssp HHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEB
T ss_pred HhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEEEcC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEec
Confidence 56799999999999999999999999999985 45779999999999753 66778899
Q ss_pred CCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEc
Q 014172 237 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG 316 (429)
Q Consensus 237 p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~ 316 (429)
++|+||.+-+ +++|+++|++| |+|+++|++|+...+........ +.+......+..+++|.++.| ..+|+++.
T Consensus 250 ~~t~~G~id~---l~~I~~la~~~-~~~lhvDaA~g~~~~~~~~~~~~--~~gi~~aDsi~~~~hK~l~~p-~g~g~l~~ 322 (481)
T 4e1o_A 250 GTTGVCAFDC---LSELGPICARE-GLWLHIDAAYAGTAFLCPEFRGF--LKGIEYADSFTFNPSKWMMVH-FDCTGFWV 322 (481)
T ss_dssp SCTTTCCBCC---HHHHHHHHHHH-TCEEEEECTTGGGGGGSGGGGGG--GTTGGGCSEEEECHHHHSSCC-SSCEEEEE
T ss_pred CCCCCcCcCC---HHHHHHHHHHc-CCeEEeehhhHHHHHhChhhHHH--hcCcccCCEEEEChHHhcCCC-CceEEEEE
Confidence 9999999988 99999999999 99999999998754322111111 111112246778999999754 45677665
Q ss_pred C-HHHHHHHHHHhhcc-------------------cCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhc
Q 014172 317 P-KHFVAACNKIQSQF-------------------TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG 376 (429)
Q Consensus 317 ~-~~~~~~l~~~~~~~-------------------~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~ 376 (429)
. +..+.........+ +.....+.+.++..++. .+.++++.+++.++++++.+.|+
T Consensus 323 ~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g-----~~g~~~~~~~~~~~a~~l~~~L~ 397 (481)
T 4e1o_A 323 KDKYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFG-----VKNLQAHVRHGTEMAKYFESLVR 397 (481)
T ss_dssp SBHHHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eCHHHHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhH-----HHHHHHHHHHHHHHHHHHHHHHh
Confidence 4 44332211100000 00113444555555553 56788899999999999999999
Q ss_pred cCCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCee
Q 014172 377 ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVL 427 (429)
Q Consensus 377 ~l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~ 427 (429)
+++|+++..+....+++++++.. . ....++.++|.+++.+.
T Consensus 398 ~~~g~~~~~~~~~~~v~f~~~~~-~---------~~~~~l~~~L~~~g~~~ 438 (481)
T 4e1o_A 398 NDPSFEIPAKRHLGLVVFRLKGP-N---------SLTENVLKEIAKAGRLF 438 (481)
T ss_dssp TCTTEECCSCCCSSEEEEEESSC-H---------HHHHHHHHHHHHHCSSB
T ss_pred cCCCeEEecCCceeEEEEEeCCc-h---------HHHHHHHHHHHhCCeEE
Confidence 99999987655555678887532 0 13678999998885454
No 217
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.82 E-value=3.1e-25 Score=223.26 Aligned_cols=308 Identities=14% Similarity=0.106 Sum_probs=205.3
Q ss_pred hcCCCeEEcCCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 92 QAGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 92 ~~g~~~i~L~~g~~~--~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
..|+.+||+..|... ++. +|.+.+++.+++.++.....+.....+|.+.|++++ + ..+.+++++++++++
T Consensus 97 ~dG~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~~~~~~~~~~~~~Lae~L~~~~----p---~~~~v~~~nSGseA~ 169 (465)
T 2yky_A 97 VDGHAYVNFLGEYTAGLFGHSHPVIRAAVERALAVGLNLSTQTENEALFAEAVCDRF----P---SIDLVRFTNSGTEAN 169 (465)
Confidence 457889999998853 332 789999999888664322224444455666666554 2 346899999999999
Q ss_pred HHHHHHhc--CCCCEEEEcCCCCCChHHHHH----HcCC--EEEEecCCCCCCCCCCHHHHHhhcc---cCCcEEEEcCC
Q 014172 169 LQAVLAVC--SPGDEVIIPAPFWVSYPEMAR----IADA--TPVILPTRISENFLLDPKVLESKLT---EKSRLLILCSP 237 (429)
Q Consensus 169 ~~~l~~l~--~~gd~Vlv~~p~y~~~~~~~~----~~g~--~~~~v~~~~~~~~~~d~e~l~~~l~---~~~~~i~l~~p 237 (429)
..+++... ..++.|++.+++|.++...+. ..|+ .++.+|. -|++.|+++++ +++++|++...
T Consensus 170 ~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-------~d~~~l~~~l~~~~~~~aavi~epv 242 (465)
T 2yky_A 170 LMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-------NDVEGTADLLKRHGHDCAAILVEPM 242 (465)
Confidence 99988753 345899999999988665443 1233 2233332 27899999887 57888877655
Q ss_pred CCCccCCC-CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEc
Q 014172 238 SNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG 316 (429)
Q Consensus 238 ~NPtG~~~-~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~ 316 (429)
++++|.+. +.+.+++|.++|++| |+++|+||+|. +.++. ...+.. .+....+.||||.+| .|+|+||+++
T Consensus 243 ~~~~G~~~~~~~~l~~l~~l~~~~-g~llI~DEv~~-~r~g~--~~a~~~----~gv~pDi~t~sK~lg-~G~piG~v~~ 313 (465)
T 2yky_A 243 LGAGGCVPAERAFLDLLRAEASRC-GALLIFDEVMT-SRLSG--GGAQEM----LGISADLTTLGKYIG-GGMSFGAFGG 313 (465)
Confidence 66799655 678899999999999 99999999999 64321 111111 122234668999999 5999999999
Q ss_pred CHHHHHHHHH-----HhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC---CceeecCCc
Q 014172 317 PKHFVAACNK-----IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE---GVKMSEPQG 388 (429)
Q Consensus 317 ~~~~~~~l~~-----~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~---g~~~~~p~~ 388 (429)
++++++.+.. .....+++.+.+++.++.++|+. .++ +.+.++++++.+++.++|+++. ++....+..
T Consensus 314 ~~~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~---l~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~ 388 (465)
T 2yky_A 314 RRDLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQ---IYT--RQAASDLSASGDRFRANLNRIAVENQAPLQFTGL 388 (465)
Confidence 9999998876 23345667889999999888875 222 2456666677777777776641 232223445
Q ss_pred eEEEEEecCC-ccCCcccCC-CCCCChHHHHHHHHHhCCeec
Q 014172 389 AFYLFIDFST-YYGSEAEGF-GKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 389 ~~~~~~~l~~-~~~~~~~~~-~~~~~~~~~~~~Ll~~~gV~v 428 (429)
|.++|+.+++ ......... .......+++++|+++ ||.+
T Consensus 389 G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~~-GV~v 429 (465)
T 2yky_A 389 GSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLRK-GIYL 429 (465)
Confidence 5567777753 100000000 0001256788998876 8875
No 218
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.89 E-value=1.6e-21 Score=194.96 Aligned_cols=216 Identities=12% Similarity=0.085 Sum_probs=159.3
Q ss_pred CHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHH----HHcCCEEEEe-cC
Q 014172 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVIL-PT 208 (429)
Q Consensus 134 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v-~~ 208 (429)
..++++++++++. . . ..++++++++++..++.+++++||+|+++.++|.++...+ +..|++++.+ +.
T Consensus 60 ~~~l~~~la~~~g----~---~-~~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 131 (421)
T 2ctz_A 60 VDVLEKRLAALEG----G---K-AALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSRE 131 (421)
T ss_dssp HHHHHHHHHHHHT----C---S-EEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTT
T ss_pred HHHHHHHHHHHhC----C---C-ceEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCC
Confidence 4678888888763 1 2 3455555699999999999999999999999999887664 7889999999 75
Q ss_pred CCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCC-cccccCCCCCCccccC
Q 014172 209 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY-EHIIYAPATHTSFASL 287 (429)
Q Consensus 209 ~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay-~~~~~~~~~~~~~~~~ 287 (429)
+ |++++++++++++++|++++|+||||.+++ +++|.++|++| |+++|+|++| ... +.+. ++ .
T Consensus 132 ~-------d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~-g~~livD~~~~~~g-~~~~---~~-~- 194 (421)
T 2ctz_A 132 E-------RPEEFLALTDEKTRAWWVESIGNPALNIPD---LEALAQAAREK-GVALIVDNTFGMGG-YLLR---PL-A- 194 (421)
T ss_dssp C-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHH-TCEEEEECGGGGGG-TSCC---GG-G-
T ss_pred C-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHc-CCEEEEECCccccc-ccCC---cc-c-
Confidence 2 899999999999999999999999999999 99999999999 9999999999 532 2221 11 1
Q ss_pred CCCCCceEEEeccChhcccccceeeEEEcC---HHH----HHHHHH----------------------H----hhcccCC
Q 014172 288 PGMWERTLTVNGFSKAFAMTGWRLGYIAGP---KHF----VAACNK----------------------I----QSQFTSG 334 (429)
Q Consensus 288 ~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~---~~~----~~~l~~----------------------~----~~~~~~~ 334 (429)
.+.++++.|++|.++.+|.|+|++++. .++ .+.+.. . ....+..
T Consensus 195 ---~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~ 271 (421)
T 2ctz_A 195 ---WGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQA 271 (421)
T ss_dssp ---GTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCC
T ss_pred ---cCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCC
Confidence 245699999999999899999998873 112 122211 0 0112223
Q ss_pred CchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceee
Q 014172 335 ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (429)
Q Consensus 335 ~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~ 384 (429)
.+.+...++...++ .+....++..++.+.+.+.|+++|+++.+
T Consensus 272 ~~~~~a~~~~~~l~-------~l~~r~~~~~~~a~~l~~~L~~~p~v~~v 314 (421)
T 2ctz_A 272 LGPFEAWVVLLGME-------TLSLRAERHVENTLHLAHWLLEQPQVAWV 314 (421)
T ss_dssp CCHHHHHHHHHHHT-------THHHHHHHHHHHHHHHHHHHHTCTTEEEE
T ss_pred CCHHHHHHHHcCcc-------hHHHHHHHHHHhHHHHHHHHHhCCCeeEE
Confidence 44444444444443 24445566667888999999998888765
No 219
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.89 E-value=2e-21 Score=199.14 Aligned_cols=273 Identities=16% Similarity=0.160 Sum_probs=197.6
Q ss_pred ChHHHHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhc-------C-CC
Q 014172 109 TPVLIAE-AGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC-------S-PG 179 (429)
Q Consensus 109 ~p~~v~~-a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~-------~-~g 179 (429)
.|..+.. .+..........|...++..++.+.+.+++.+.+|.+ ++++++|+|+++++..++.++. + +|
T Consensus 120 ~~~~~~~~~l~~~~n~~~~~~~~s~~~~~le~~~~~~la~l~g~~--~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G 197 (515)
T 2jis_A 120 DPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVGWS--SGDGIFCPGGSISNMYAVNLARYQRYPDCKQRG 197 (515)
T ss_dssp CHHHHHHHHHHHHHCCCTTCTTTCHHHHHHHHHHHHHHHHHHTCS--SCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHC
T ss_pred CHHHHHHHHHHHHhccCCCchhhchHHHHHHHHHHHHHHHHhCCC--CCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcC
Confidence 3555544 3333333333456666677788888888888888854 6899999999999998888763 2 57
Q ss_pred C------EEEEcCCCCCChHHHHHHcCC---EEEEecCCCCCCCCCCHHHHHhhccc------CCcEEEEcCCCCCccCC
Q 014172 180 D------EVIIPAPFWVSYPEMARIADA---TPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSV 244 (429)
Q Consensus 180 d------~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~e~l~~~l~~------~~~~i~l~~p~NPtG~~ 244 (429)
| .|+++.+.|+++...++..|. +++.+|++ .++.+|+++|++++++ ++++|++++|+||||.+
T Consensus 198 ~~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i 275 (515)
T 2jis_A 198 LRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKAD--ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAF 275 (515)
T ss_dssp GGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCB
T ss_pred ccccCCeEEEECCCccHHHHHHHHHcCCCCCcEEEEecC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCc
Confidence 6 899999999999999999988 89999986 3577999999999975 48899999999999999
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHH--HHH
Q 014172 245 YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH--FVA 322 (429)
Q Consensus 245 ~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~--~~~ 322 (429)
.+ +++|+++|++| |+|+++|++|+.+.+....... .+.+..+..+++.|++|.++ .+.++|+++++++ +++
T Consensus 276 ~~---l~~I~~la~~~-g~~l~vD~a~~~~~~~~~~~~~--~~~g~~~aD~v~~s~hK~l~-~p~g~G~l~~~~~~~~~~ 348 (515)
T 2jis_A 276 DP---LEAIADVCQRH-GLWLHVDAAWGGSVLLSQTHRH--LLDGIQRADSVAWNPHKLLA-AGLQCSALLLQDTSNLLK 348 (515)
T ss_dssp CC---HHHHHHHHHHH-TCEEEEEETTGGGGGGCTTTGG--GGTTGGGCSEEEECTTSTTC-CCSCCEEEEESCCSCHHH
T ss_pred cC---HHHHHHHHHHc-CCeEEEehhhhhHHHhChhhHh--hcCCCccCCEEEECcccccC-CCCCeeEEEEeChHHHHH
Confidence 98 99999999999 9999999999987654321111 12221244588999999987 4467999998765 655
Q ss_pred HHHH----Hh-hc-------ccC---------CCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCc
Q 014172 323 ACNK----IQ-SQ-------FTS---------GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV 381 (429)
Q Consensus 323 ~l~~----~~-~~-------~~~---------~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~ 381 (429)
.... .. .. +.. ....+.+.++..++. .+.++++.++..++++++.+.|++++|+
T Consensus 349 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg-----~~g~~~~~~~~~~~a~~l~~~L~~~~g~ 423 (515)
T 2jis_A 349 RCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQG-----DQGLERRIDQAFVLARYLVEEMKKREGF 423 (515)
T ss_dssp HHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTSTTE
T ss_pred HHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 4211 11 00 000 012344455555553 4567888889999999999999999899
Q ss_pred eeec-CCceEEEEEecC
Q 014172 382 KMSE-PQGAFYLFIDFS 397 (429)
Q Consensus 382 ~~~~-p~~~~~~~~~l~ 397 (429)
++.. |..+.++|..+|
T Consensus 424 ~~~~~~~~~~v~f~~~p 440 (515)
T 2jis_A 424 ELVMEPEFVNVCFWFVP 440 (515)
T ss_dssp EESSCCSSSEEEEEECC
T ss_pred EEeCCCCeeEEEEEEeC
Confidence 8874 455665554444
No 220
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.89 E-value=7e-22 Score=201.70 Aligned_cols=293 Identities=12% Similarity=0.125 Sum_probs=202.9
Q ss_pred CChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHh----c------
Q 014172 108 DTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV----C------ 176 (429)
Q Consensus 108 ~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l----~------ 176 (429)
+.++.+++++.....+ ....|...++..++++.+.+++.+.+|.+ ..+++++|+|+++++..++.+. +
T Consensus 111 ~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~-~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~ 189 (497)
T 2qma_A 111 PLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLS-EKADGIFTSGGTQSNQMGLMLARDWIADKLSGH 189 (497)
T ss_dssp CBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCC-TTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCC-CCCCeEEcCCchHHHHHHHHHHHHHHHHhhccc
Confidence 3477777777655433 23345545566789999999999988853 2379999999999999888873 3
Q ss_pred ---CC------CC-EEEEcCCCCCChHHHHHHcCC---EEEEecCCCCCCCCCCHHHHHhhcccC----Cc--EEEEcCC
Q 014172 177 ---SP------GD-EVIIPAPFWVSYPEMARIADA---TPVILPTRISENFLLDPKVLESKLTEK----SR--LLILCSP 237 (429)
Q Consensus 177 ---~~------gd-~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~e~l~~~l~~~----~~--~i~l~~p 237 (429)
.+ |+ .|+++.+.|.++...++..|. +++.+|++ .++.+|+++|+++++++ ++ +|+++++
T Consensus 190 ~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~ 267 (497)
T 2qma_A 190 SIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDAN--ADGTMDITKLDEVIAQAKAEGLIPFAIVGTAG 267 (497)
T ss_dssp CHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBS
T ss_pred chhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecC--CCCcCCHHHHHHHHHHHHHCCCcceEEEEcCC
Confidence 12 46 899999999999999999877 79999985 45779999999998753 44 7788999
Q ss_pred CCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcC
Q 014172 238 SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP 317 (429)
Q Consensus 238 ~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~ 317 (429)
+||||.+.+ +++|+++|++| |+++++|++|+.+.+... ... .+.+.....+++.|++|.++.+ .++||+++.
T Consensus 268 ~~~tG~~~~---l~~I~~l~~~~-~~~l~vD~a~~~~~~~~~-~~~--~~~gi~~~D~i~~s~hK~l~~p-~~~G~l~~~ 339 (497)
T 2qma_A 268 TTDHGAIDD---LDFIADMAVKH-DMWMHVDGAYGGALILSS-HKS--RLKGVERAHSISVDFHKLFYQT-ISCGALLVN 339 (497)
T ss_dssp CTTTCCBCC---HHHHHHHHHHH-TCEEEEEETTGGGGGGST-TGG--GGTTGGGCSEEEEETTTTTCCC-SSCEEEEES
T ss_pred CCCCCCCCC---HHHHHHHHHHc-CCEEEEehhhhHHHHhCc-chH--hhcCcccCCEEEEcchhccCCC-cceEEEEEe
Confidence 999999888 99999999999 999999999998765332 110 1111113347788999998844 799999875
Q ss_pred HH-HHHHHHHHhhcccCC----C-------------chHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC
Q 014172 318 KH-FVAACNKIQSQFTSG----A-------------SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE 379 (429)
Q Consensus 318 ~~-~~~~l~~~~~~~~~~----~-------------~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~ 379 (429)
++ .++.+.......... + ..+.+.++...+ ..++++++.++..++++++.+.|++++
T Consensus 340 ~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~l-----g~~g~~~~~~~~~~~a~~l~~~L~~~~ 414 (497)
T 2qma_A 340 DKSNFKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNV-----GPKALGDMYDHLLAQTLEVADMIRTND 414 (497)
T ss_dssp CGGGGGGGCC--------------------CCSCCCTHHHHHHHHHHT-----CHHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred CHHHHHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHHHHHHHh-----CHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 43 333221100000000 0 112222223222 357788889999999999999999988
Q ss_pred Cceee-cCCceEEEEEecCCccCCcccCCCCCCC----hHHHHHHHHHhCCeec
Q 014172 380 GVKMS-EPQGAFYLFIDFSTYYGSEAEGFGKIEN----SESLCRYLLDKAQVLL 428 (429)
Q Consensus 380 g~~~~-~p~~~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~Ll~~~gV~v 428 (429)
++++. +|++++ +++++... + .+ ..++.+.|.++ |+.+
T Consensus 415 ~~~~~~~~~~~~-v~f~~~~~-~---------~~~~~l~~~l~~~l~~~-G~~~ 456 (497)
T 2qma_A 415 QFELLAEPSLST-VLFRATHE-T---------ADLDELNKALRLEALTR-GIAV 456 (497)
T ss_dssp TEEECSCCSSSE-EEEEECCS-S---------SCHHHHHHHHHHHHHHH-TSCB
T ss_pred CeEEEcCCCceE-EEEEEcCC-c---------cCHHHHHHHHHHHHHhC-CCEE
Confidence 99885 566665 55666431 0 01 24566777766 6653
No 221
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.88 E-value=1.3e-22 Score=205.80 Aligned_cols=305 Identities=12% Similarity=0.058 Sum_probs=204.7
Q ss_pred cCCCeEEcCCCCCC--CCC-hHHHHHHHHHHHHc----CCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChH
Q 014172 93 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIRE----GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAK 165 (429)
Q Consensus 93 ~g~~~i~L~~g~~~--~~~-p~~v~~a~~~~~~~----~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~ 165 (429)
.|+.+||+..|... ++. +|++.+++.+++.. ....|+. ....++++++++++.+..+ ...++|++++|++
T Consensus 61 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~--~~~~~v~f~~sGs 137 (472)
T 1ohv_A 61 DGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAP--KGMSQLITMACGS 137 (472)
T ss_dssp TSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCC--TTCCEEEEESSHH
T ss_pred CCCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCC--CCcCEEEEeCCch
Confidence 57889999988753 443 78999999886532 1123432 3457899999998877654 2567999999999
Q ss_pred HHHHHHHHHhc--------C-----------------CC---CEEEEcCCCCCChHHHHH-HcCCEE-------------
Q 014172 166 QSILQAVLAVC--------S-----------------PG---DEVIIPAPFWVSYPEMAR-IADATP------------- 203 (429)
Q Consensus 166 ~al~~~l~~l~--------~-----------------~g---d~Vlv~~p~y~~~~~~~~-~~g~~~------------- 203 (429)
+++..+++.+. . +| +.|++.+++|+++...+. ..|...
T Consensus 138 eA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~ 217 (472)
T 1ohv_A 138 CSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPI 217 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCE
T ss_pred hHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCcc
Confidence 99999998873 1 46 899999999998766543 333211
Q ss_pred EEecCC--C-CCC--C-----CCCHHHHHhhccc------CCcEEEEcCCCCCccC-CCCHHHHHHHHHHHHhCCCeEEE
Q 014172 204 VILPTR--I-SEN--F-----LLDPKVLESKLTE------KSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVL 266 (429)
Q Consensus 204 ~~v~~~--~-~~~--~-----~~d~e~l~~~l~~------~~~~i~l~~p~NPtG~-~~~~~~l~~I~~~a~~~~~i~vi 266 (429)
+.+|.. + ... + ..|++.|++++++ ++++|++...+|++|. +.+++.+++|.++|++| |+++|
T Consensus 218 ~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~-g~lli 296 (472)
T 1ohv_A 218 APFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKH-GCAFL 296 (472)
T ss_dssp ECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHT-TCEEE
T ss_pred cCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHh-CCEEE
Confidence 122210 0 000 0 1268899998876 7888888777888996 56899999999999999 99999
Q ss_pred EccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHH
Q 014172 267 SDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAA 346 (429)
Q Consensus 267 ~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~ 346 (429)
+||+|.++.+.|. ...+..+.- ...+.+.||||.+ +.| ||++ ++++. .+.......+++.+.+++.++.++
T Consensus 297 ~DEv~~g~g~~g~-~~~~~~~gv--~~~~Di~t~sK~~-l~G---G~~~-~~~~~-~~~~~~~~~T~~~~~~~~aaa~aa 367 (472)
T 1ohv_A 297 VDEVQTGGGSTGK-FWAHEHWGL--DDPADVMTFSKKM-MTG---GFFH-KEEFR-PNAPYRIFNTWLGDPSKNLLLAEV 367 (472)
T ss_dssp EECTTTTTTTTSS-SSGGGGGCC--SSCCSEEEECGGG-SSE---EEEE-CGGGS-CSSSSSSCCSSSSCHHHHHHHHHH
T ss_pred EeCcccCCCCCCC-chhccccCC--CCCCCEEEEcccc-ccC---CccC-chhhc-ccccccccCccCccHHHHHHHHHH
Confidence 9999997655442 112222210 0002255899996 455 7876 65542 122222334556788999999888
Q ss_pred HhcCCCChHHHHHHHHHHHHHHHHHHHHhccC----CC-ceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHH
Q 014172 347 LGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL----EG-VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLL 421 (429)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l----~g-~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll 421 (429)
|+. ..+ +.+.++++++++++.+.|+++ ++ +...++.|.| ++++++.. .+..+++++|+
T Consensus 368 l~~---~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~g~~-~~~~~~~~-----------~~~~~~~~~l~ 430 (472)
T 1ohv_A 368 INI---IKR--EDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGTF-CSFDTPDE-----------SIRNKLISIAR 430 (472)
T ss_dssp HHH---HHH--TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEETTE-EEEECSSH-----------HHHHHHHHHHH
T ss_pred HHH---HHh--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCCceE-EEEEeCCh-----------hHHHHHHHHHH
Confidence 874 122 345677788888888887764 43 5445666655 56677531 13678999998
Q ss_pred HhCCeec
Q 014172 422 DKAQVLL 428 (429)
Q Consensus 422 ~~~gV~v 428 (429)
++ ||.+
T Consensus 431 ~~-Gv~~ 436 (472)
T 1ohv_A 431 NK-GVML 436 (472)
T ss_dssp HT-TEEC
T ss_pred HC-CeEE
Confidence 75 8875
No 222
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.88 E-value=1.2e-21 Score=193.04 Aligned_cols=234 Identities=12% Similarity=0.128 Sum_probs=177.1
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChH--HHHHHcC--CEEEEecCCC
Q 014172 135 LELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP--EMARIAD--ATPVILPTRI 210 (429)
Q Consensus 135 ~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~--~~~~~~g--~~~~~v~~~~ 210 (429)
.++.+++++.+.+.+|.. +.|++|+|++++++.++.. +.+||+|++.++.|.++. ..++..| .+++.++.+.
T Consensus 34 ~~~~~~~~~~l~~~~~~~---~~v~~~~sgt~a~~~~~~~-~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 109 (379)
T 3ke3_A 34 QEVMNDLLSNLKTVYNAE---AAVIIPGSGTYGMEAVARQ-LTIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAER 109 (379)
T ss_dssp HHHHHHHHHHHHHHHTCS---EEEEEESCHHHHHHHHHHH-HCTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEE
T ss_pred HHHHHHHHHHHHHHhCCC---CEEEEcCChhHHHHHHHHh-CCCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEeccc
Confidence 467777777777777743 6889999999999988755 579999999999887754 3455566 4888887643
Q ss_pred CC------C-CCCCHHHHHhhcc-cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCC
Q 014172 211 SE------N-FLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT 282 (429)
Q Consensus 211 ~~------~-~~~d~e~l~~~l~-~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~ 282 (429)
.+ . ..+|++++++++. +++++|++++++||||.+++.+++++|.++|++| |+++|+|+++. . + ...
T Consensus 110 ~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~-~~~li~D~~~~-g---~-~~~ 183 (379)
T 3ke3_A 110 TEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSV-GGLLVIDCIAS-G---C-VWL 183 (379)
T ss_dssp SSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHT-TCEEEEECTTC-T---T-CCC
T ss_pred cccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHc-CCEEEEEeccc-C---C-ccc
Confidence 11 1 2479999999995 4899999999999999999999999999999999 99999999975 2 1 222
Q ss_pred ccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHHHHh----------------------hcccCCCchHHH
Q 014172 283 SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ----------------------SQFTSGASSISQ 340 (429)
Q Consensus 283 ~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~----------------------~~~~~~~~~~~q 340 (429)
.+.. .+.++++.|++|.++ .+.++|++++++++++.+.... ..+..+++...+
T Consensus 184 ~~~~----~~~d~~~~s~~K~l~-~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~ 258 (379)
T 3ke3_A 184 DMKE----LGIDVLISAPQKGWS-STPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSL 258 (379)
T ss_dssp CHHH----HTCSEEEECTTTTTC-SCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHH
T ss_pred cccc----cCCCEEEecchhhcC-CCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHH
Confidence 2221 244588999999986 4456899999999888775411 001235677777
Q ss_pred HHHHHHHhcCCCChH-HHHHHHHHHHHHHHHHHHHhccCCCceeecCC
Q 014172 341 KAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 387 (429)
Q Consensus 341 ~aa~~~l~~~~~~~~-~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~p~ 387 (429)
.++.++|+. ..+ .++++.++++++++++.+.|+++ |+++..+.
T Consensus 259 ~a~~aal~~---~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~~~~ 302 (379)
T 3ke3_A 259 RQFRDAILE---AKEIGFDILRDAQWELGNRVRKVLTDK-GIESVAAE 302 (379)
T ss_dssp HHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSBCT
T ss_pred HHHHHHHHH---HHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEecCCc
Confidence 777777764 233 36788899999999999999998 88776543
No 223
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.88 E-value=1.5e-21 Score=197.99 Aligned_cols=294 Identities=12% Similarity=0.037 Sum_probs=208.9
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCC-------CcEEEecChHHHHHHHHHHhcC-----
Q 014172 110 PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTP-------DQILVSNGAKQSILQAVLAVCS----- 177 (429)
Q Consensus 110 p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-------~~i~~t~G~~~al~~~l~~l~~----- 177 (429)
|..+.+.+...+......|...++..++++.+++++.+.+|.+... ...++|+|+|+++..++.+..+
T Consensus 87 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~ 166 (475)
T 3k40_A 87 PAIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKE 166 (475)
T ss_dssp HHHHHHHHHHHHCCCSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCccccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHH
Confidence 4556666777776656678778888999999999999999964221 3689999999998888777631
Q ss_pred --------------CCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccC------CcEEEEcCC
Q 014172 178 --------------PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEK------SRLLILCSP 237 (429)
Q Consensus 178 --------------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~------~~~i~l~~p 237 (429)
+++.|+++.++|.++...++..|++++.+|++ .++ +|+++|+++++++ +.+|+++.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d--~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~ 243 (475)
T 3k40_A 167 VKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQSE--NHR-MRGAALEKAIEQDVAEGLIPFYAVVTLG 243 (475)
T ss_dssp HHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTCEEEEECCB--TTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBS
T ss_pred hhccCcccccccccCCeEEEECCCchHHHHHHHHHcCCceEEEECC--CCC-cCHHHHHHHHHHHHHCCCccEEEEEEec
Confidence 34689999999999999999999999999986 346 9999999999753 567788999
Q ss_pred CCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcC
Q 014172 238 SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP 317 (429)
Q Consensus 238 ~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~ 317 (429)
+|+||.+.+ +++|+++|++| |+++++|++|+...+........ +.+......+..+++|.++ ....+|+++..
T Consensus 244 ~t~~G~~~~---l~~I~~la~~~-~~~lhvD~A~~~~~~~~~~~~~~--~~gi~~~Ds~~~~~hK~l~-~p~g~g~l~~~ 316 (475)
T 3k40_A 244 TTNSCAFDY---LDECGPVGNKH-NLWIHVDAAYAGSAFICPEYRHL--MKGIESADSFNFNPHKWML-VNFDCSAMWLK 316 (475)
T ss_dssp CTTTCCBCC---HHHHHHHHHHT-TCEEEEECTTGGGGGGSGGGGGG--GTTGGGCSEEEECHHHHSS-CCSSCEEEEES
T ss_pred CCCCcCcCC---HHHHHHHHHHh-CCeEEEeHHhHHHHHhCHhhHHH--hcCcccCCEEEECchhccC-CCCceEEEEEe
Confidence 999999988 99999999999 99999999998754322111111 1111123477899999987 44567887764
Q ss_pred H-HHH-HHHHHHhhcc--------------cC-C---CchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 014172 318 K-HFV-AACNKIQSQF--------------TS-G---ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 377 (429)
Q Consensus 318 ~-~~~-~~l~~~~~~~--------------~~-~---~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 377 (429)
+ +.+ +.+....... .. + ...+.+.+++..+. .+.++++.+++.++++++.+.|++
T Consensus 317 ~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g-----~~g~~~~~~~~~~~a~~l~~~L~~ 391 (475)
T 3k40_A 317 DPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYG-----VENLQAHIRRHCNFAKQFGDLCVA 391 (475)
T ss_dssp SGGGC---------------------------CCCGGGTHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3 332 2221100000 00 0 12333444444443 467888999999999999999999
Q ss_pred CCCceeecCCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 378 LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 378 l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++|+++..+.....++++++.. . ....++.++|.+++++.+
T Consensus 392 ~~g~~l~~~~~~~iv~f~~~~~-~---------~~~~~l~~~L~~~g~~~~ 432 (475)
T 3k40_A 392 DSRFELAAEINMGLVCFRLKGS-N---------ERNEALLKRINGRGHIHL 432 (475)
T ss_dssp STTEEESSCCBTTEEEEEESSC-H---------HHHHHHHHHHHHHTSCBC
T ss_pred CCCEEEecCCceEEEEEEeCCc-h---------HHHHHHHHHHHhCCcEEE
Confidence 9999987655555577777531 0 136789999998865543
No 224
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.87 E-value=4.7e-21 Score=202.24 Aligned_cols=236 Identities=14% Similarity=0.062 Sum_probs=162.3
Q ss_pred CHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH-HHHcCCEEEEecCCCCC
Q 014172 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM-ARIADATPVILPTRISE 212 (429)
Q Consensus 134 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~-~~~~g~~~~~v~~~~~~ 212 (429)
..++++.+|+++ | ....+++++|+++++..++.+++++||+|+++.|+|.++... ++..|++++.++...+
T Consensus 175 i~e~e~~lA~~~----g---ae~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~~- 246 (730)
T 1c4k_A 175 AVAAEKHAARVY----N---ADKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNRN- 246 (730)
T ss_dssp HHHHHHHHHHHT----T---CSEEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEEC-
T ss_pred HHHHHHHHHHHH----C---CCcEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEEeCCcc-
Confidence 467777777765 4 234688999999999999999999999999999999998887 8899999999986532
Q ss_pred CCC----CCHHHH-----HhhcccC------C----cEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcc
Q 014172 213 NFL----LDPKVL-----ESKLTEK------S----RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 273 (429)
Q Consensus 213 ~~~----~d~e~l-----~~~l~~~------~----~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~ 273 (429)
+|. +|+++| +++++++ + |++++++| ||+|.+.+ +++|+++|++| ++++|+||+|+.
T Consensus 247 ~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~d---l~~I~~la~~~-g~~livDeAh~~ 321 (730)
T 1c4k_A 247 PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYN---AHEVVKRIGHL-CDYIEFDSAWVG 321 (730)
T ss_dssp TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEEC---HHHHHHHHGGG-BSEEEEECTTCC
T ss_pred ccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecC---HHHHHHHHHHc-CCeEEEEccccc
Confidence 233 688888 8888765 5 89999999 58999998 99999999999 999999999974
Q ss_pred -cccCCCCC-CccccC---CCCCCceEEEeccChhcccccceee-EEEcCHHH---------HHHHHHHhh-cccCCCch
Q 014172 274 -IIYAPATH-TSFASL---PGMWERTLTVNGFSKAFAMTGWRLG-YIAGPKHF---------VAACNKIQS-QFTSGASS 337 (429)
Q Consensus 274 -~~~~~~~~-~~~~~~---~~~~~~~i~~~S~SK~~~~~G~R~G-~v~~~~~~---------~~~l~~~~~-~~~~~~~~ 337 (429)
+.|++... .+.... ..+..+++++.|+||.+ +|.+.| +++.+++. ...+..... ....+++.
T Consensus 322 ~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L--~g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~ 399 (730)
T 1c4k_A 322 YEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQ--AGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFY 399 (730)
T ss_dssp GGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHS--SCCTTCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCH
T ss_pred ccccCcccCCcCcccccccCCCCCCEEEEECCCCCC--CCCCCEEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcH
Confidence 33443111 111111 22234679999999986 566654 55332221 122322221 22233455
Q ss_pred HHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc-CCCceeecC
Q 014172 338 ISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEP 386 (429)
Q Consensus 338 ~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-l~g~~~~~p 386 (429)
....+..+++..- ..+...+..+++.++.+.+++.|++ ++|+++..|
T Consensus 400 ~~iaal~aA~~~l--~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p 447 (730)
T 1c4k_A 400 PMYAALDVNAAMQ--EGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVP 447 (730)
T ss_dssp HHHHHHHHHHHHH--SHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSC
T ss_pred HHHHHHHHHHHHH--HhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccc
Confidence 4444444444420 1213345566777778888888887 678877544
No 225
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.84 E-value=6.6e-20 Score=194.96 Aligned_cols=229 Identities=14% Similarity=0.126 Sum_probs=155.4
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCC
Q 014172 135 LELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENF 214 (429)
Q Consensus 135 ~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~ 214 (429)
.++++.+++++ |. .+.+++++|+++++..++.+++++||.|+++.|+|.++...+...|++++.++...+ ++
T Consensus 208 ~~~ee~la~l~----G~---d~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~-~~ 279 (755)
T 2vyc_A 208 GESEKYAARVF----GA---DRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRN-RY 279 (755)
T ss_dssp HHHHHHHHHHH----TC---SEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBC-TT
T ss_pred HHHHHHHHHHh----CC---CceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCC-cc
Confidence 45555555554 42 356889999999999999999999999999999999999999999999999987642 23
Q ss_pred C----C-----CHHHHHhhccc--CCc--------EEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCccc-
Q 014172 215 L----L-----DPKVLESKLTE--KSR--------LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI- 274 (429)
Q Consensus 215 ~----~-----d~e~l~~~l~~--~~~--------~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~- 274 (429)
+ + |++.|++++++ +++ ++++++| ||+|.+++ +++|+++|++| ++++++|++|+..
T Consensus 280 g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~-~~~livDeA~~~~~ 354 (755)
T 2vyc_A 280 GIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKT-SDRLHFDEAWYGYA 354 (755)
T ss_dssp SCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTT-CSEEEEECTTCTTG
T ss_pred ccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHc-CCEEEEECcCchhc
Confidence 3 4 99999999864 444 8899998 79999998 89999999999 9999999999853
Q ss_pred ccCCC--CCCcccc--CCCCCCceEEEeccChhcccccce-eeEEEcCHH---H-HHHHHHHh-hcccCCCchHHHHHHH
Q 014172 275 IYAPA--THTSFAS--LPGMWERTLTVNGFSKAFAMTGWR-LGYIAGPKH---F-VAACNKIQ-SQFTSGASSISQKAGV 344 (429)
Q Consensus 275 ~~~~~--~~~~~~~--~~~~~~~~i~~~S~SK~~~~~G~R-~G~v~~~~~---~-~~~l~~~~-~~~~~~~~~~~q~aa~ 344 (429)
.+++. ....+.. .+...++++++.|+||.+ +|.+ .|+++++++ + ...+.... .....+++.+...+..
T Consensus 355 ~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L--~g~~~g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~ 432 (755)
T 2vyc_A 355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASND 432 (755)
T ss_dssp GGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSS--SCCTTCEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHH
T ss_pred ccCcccCCcchhcCCcCCccCCCeEEEECccccc--cCcCCeeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 34321 1122211 111246778999999986 5666 566666443 1 12333222 2223345555555555
Q ss_pred HHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCC
Q 014172 345 AALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG 380 (429)
Q Consensus 345 ~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~l~g 380 (429)
+++..-. .+...+..+++.++.+.+++.|++++|
T Consensus 433 aA~~~l~--~~gg~~~~~~~~~~a~~~r~~L~~l~~ 466 (755)
T 2vyc_A 433 VAVSMMD--GNSGLSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_dssp HHHHHHS--THHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH--hhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 5554210 111334455555566666666655544
No 226
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.81 E-value=8.5e-19 Score=183.67 Aligned_cols=225 Identities=13% Similarity=0.145 Sum_probs=154.6
Q ss_pred CHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCC
Q 014172 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISEN 213 (429)
Q Consensus 134 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~ 213 (429)
..++++.+|++++ ....+++++|++.++..++.+++++||.|+++.++|.++...+.+.|++++.++... +.
T Consensus 197 i~eaE~~lA~~fG-------a~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~~-~~ 268 (715)
T 3n75_A 197 HKEAEQYIARVFN-------ADRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTR-NA 268 (715)
T ss_dssp HHHHHHHHHHHHT-------CSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEECCCB-CT
T ss_pred HHHHHHHHHHHhC-------CCCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEEeccc-cc
Confidence 4678888888764 345677888889999999999999999999999999999999999999999998764 34
Q ss_pred CCC---------CHHHHHhhccc--CCc---EEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccc-cCC
Q 014172 214 FLL---------DPKVLESKLTE--KSR---LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII-YAP 278 (429)
Q Consensus 214 ~~~---------d~e~l~~~l~~--~~~---~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~-~~~ 278 (429)
+++ |++.|++++++ ++| ++++++| ||+|.+++ +++|+++|+++ + +++||+|+... |++
T Consensus 269 ~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~d---l~~I~ela~~~-~--livDEAH~~~~~f~~ 341 (715)
T 3n75_A 269 YGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYN---TDFIKKTLDVK-S--IHFDSAWVPYTNFSP 341 (715)
T ss_dssp TCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEEC---HHHHHHHCCCS-E--EEEECTTCTTGGGSG
T ss_pred cccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCC---HHHHHHHhCcC-c--EEEccccccccccCC
Confidence 543 89999999974 344 8999999 99999999 88888888766 4 78899998643 443
Q ss_pred CCC-CccccCCCCCCce-EEEeccChhcccccc-eeeEEEcCHHH-HHHHHHHhhcc-cCCCchHHHHHHHHHHhcCCCC
Q 014172 279 ATH-TSFASLPGMWERT-LTVNGFSKAFAMTGW-RLGYIAGPKHF-VAACNKIQSQF-TSGASSISQKAGVAALGLGYAG 353 (429)
Q Consensus 279 ~~~-~~~~~~~~~~~~~-i~~~S~SK~~~~~G~-R~G~v~~~~~~-~~~l~~~~~~~-~~~~~~~~q~aa~~~l~~~~~~ 353 (429)
... .+........+.+ ++++|+||+++ |+ ..||+.++.++ ...+.+..... +.+++.+..+++.+++.. .
T Consensus 342 ~~~~~~al~~g~~aD~vii~~~S~hKtL~--gltqgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~---~ 416 (715)
T 3n75_A 342 IYEGKCGMSGGRVEGKVIYETQSTHKLLA--AFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAM---M 416 (715)
T ss_dssp GGTTSSTTSSSCCTTCEEEEEECHHHHSS--CCTTCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHH---H
T ss_pred ccccccccccCcCCCEEEEEEeccccccc--CCCCeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHH---H
Confidence 211 1111111012443 66999999975 43 35788776542 22333333323 344666665555555542 1
Q ss_pred h-HHHHHHHHHHHHHHHHHHHHhccC
Q 014172 354 G-EVVSKMVKAFRERRDFLVKSFGEL 378 (429)
Q Consensus 354 ~-~~~~~~~~~~~~~r~~l~~~L~~l 378 (429)
. ..-.+++++..++.+.+++.|+++
T Consensus 417 ~~~~g~~~~~~l~~~a~~~r~~L~~i 442 (715)
T 3n75_A 417 KGNAGKRLINGSIERAIKFRKEIKRL 442 (715)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhccHHHHHHHHHHHHHHHHHHHHh
Confidence 1 123345566666666666666654
No 227
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.72 E-value=4.8e-17 Score=159.16 Aligned_cols=289 Identities=9% Similarity=0.047 Sum_probs=185.9
Q ss_pred CCCCChHHHHHHHHHHHHcCC----CCCC-CCCC--CHHHHHHHHHHHHhhcCCCCCCCcEEE-ecChHHHHHHHHHHhc
Q 014172 105 PDFDTPVLIAEAGINAIREGF----TRYT-PNAG--TLELRSAICHKLKEENGLSYTPDQILV-SNGAKQSILQAVLAVC 176 (429)
Q Consensus 105 ~~~~~p~~v~~a~~~~~~~~~----~~Y~-~~~G--~~~lr~~ia~~l~~~~g~~~~~~~i~~-t~G~~~al~~~l~~l~ 176 (429)
...+.|++|++++.+.+.+.. .-+. ...+ ..++.+...+.+.+..|.+ ++++|++ |.|+|+++++++..++
T Consensus 20 t~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~-~~~evif~t~~~T~a~n~a~~~l~ 98 (377)
T 3e77_A 20 FQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVP-DNYKVIFLQGGGCGQFSAVPLNLI 98 (377)
T ss_dssp CSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHHHHHHHHHHHG
T ss_pred ccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCCeEEEEcCchHHHHHHHHHhcc
Confidence 345668999999998764311 0000 0011 1233333444444445532 2357888 5789999999999998
Q ss_pred CC--CCEEEEcCCCCCCh--HHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHH
Q 014172 177 SP--GDEVIIPAPFWVSY--PEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 252 (429)
Q Consensus 177 ~~--gd~Vlv~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~ 252 (429)
.+ ||+|++..-++.+. ...++..|..++.++.+. ++..+++.++..+++++++|.+++..|.||+++| +
T Consensus 99 ~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~--~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~p---i-- 171 (377)
T 3e77_A 99 GLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKLG--SYTKIPDPSTWNLNPDASYVYYCANETVHGVEFD---F-- 171 (377)
T ss_dssp GGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCCS--SSCSCCCGGGCCCCTTCSCEEEESEETTTTEECS---S--
T ss_pred CCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccCC--CcCCCCChHHhccCCCccEEEEeCccCchheEch---h--
Confidence 65 89988766544432 344566788877777643 3446778888888899999999988889999999 4
Q ss_pred HHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHH--------
Q 014172 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC-------- 324 (429)
Q Consensus 253 I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l-------- 324 (429)
+|+++ ++++++|.+.+. +..+..+..+ + +.+.|-.|.+|.+| +|+++..+++++.+
T Consensus 172 ---i~~~~-~~~~~vD~~q~~----g~~~id~~~~----~--~~~~s~~K~~gp~G--~g~l~~~~~~l~~~~~~~p~~~ 235 (377)
T 3e77_A 172 ---IPDVK-GAVLVCDMSSNF----LSKPVDVSKF----G--VIFAGAQKNVGSAG--VTVVIVRDDLLGFALRECPSVL 235 (377)
T ss_dssp ---CCCCT-TCCEEEECTTTT----TSSCCCGGGC----S--EEEEEGGGTTSCTT--CEEEEEETTSCSCCCTTSCGGG
T ss_pred ---hhccC-CCEEEEEccccc----CCCCCchhhc----C--EEEEecccccCCCc--cEEEEEcHHHHhhccCCCCchh
Confidence 46788 999999999886 3333344332 3 46788999999777 68887765543211
Q ss_pred --HHH--hhcccCCCchHHHHHHHHHHhcCCCChH-HHHHHHHHHHHHHHHHHHHhccCCCceeec----CCceEEEEEe
Q 014172 325 --NKI--QSQFTSGASSISQKAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSFGELEGVKMSE----PQGAFYLFID 395 (429)
Q Consensus 325 --~~~--~~~~~~~~~~~~q~aa~~~l~~~~~~~~-~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~----p~~~~~~~~~ 395 (429)
... ......+++....+++.++|+.- .+. .++.+.++.++..+++++.|++++|+.+.. ..++..+.+.
T Consensus 236 ~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l--~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~ 313 (377)
T 3e77_A 236 EYKVQAGNSSLYNTPPCFSIYVMGLVLEWI--KNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFR 313 (377)
T ss_dssp CHHHHHTTTTCSSCCCHHHHHHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEE
T ss_pred hHHHHhhcCCCCCCchHHHHHHHHHHHHHH--HHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEE
Confidence 111 11122345666666666677630 123 578899999999999999999998887532 1234446677
Q ss_pred cCCccCCcccCCCCCCC-hHHHHHHHHHhCCeec
Q 014172 396 FSTYYGSEAEGFGKIEN-SESLCRYLLDKAQVLL 428 (429)
Q Consensus 396 l~~~~~~~~~~~~~~~~-~~~~~~~Ll~~~gV~v 428 (429)
+++.-. -.+ ...+..+|.+ .||.+
T Consensus 314 ~~~~~~--------~~~~~~~~l~~l~~-~Gi~~ 338 (377)
T 3e77_A 314 IGNAKG--------DDALEKRFLDKALE-LNMLS 338 (377)
T ss_dssp ESSTTC--------CHHHHHHHHHHHHH-TTEES
T ss_pred cCCCCC--------chhHHHHHHHHHHH-CCcEE
Confidence 775200 000 1356666654 58875
No 228
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.68 E-value=7.4e-16 Score=150.10 Aligned_cols=290 Identities=13% Similarity=0.152 Sum_probs=185.0
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCC----CCCC-CCCC--CHHHHHHHHHHHHhhcCCCCCCCcEEE-ecChHHH
Q 014172 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGF----TRYT-PNAG--TLELRSAICHKLKEENGLSYTPDQILV-SNGAKQS 167 (429)
Q Consensus 96 ~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~----~~Y~-~~~G--~~~lr~~ia~~l~~~~g~~~~~~~i~~-t~G~~~a 167 (429)
++++|+.|-. +.|++|++++.+.+.+.. .-|. ...+ ..++.+...+.+.+..|.+ ++++|++ |+|+|++
T Consensus 5 ~~~~f~pgpt--~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~-~~~~v~f~t~~~T~a 81 (361)
T 3m5u_A 5 RKINFSAGPS--TLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELN-DDYEVLFLQGGASLQ 81 (361)
T ss_dssp CCEECCSSSC--CCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHHH
T ss_pred ceEeecCCCC--CCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCC-CCceEEEEcCcHHHH
Confidence 4667766653 468899999988764211 0000 0011 1233333334444445532 2457887 9999999
Q ss_pred HHHHHHHhcCCCCEEE-EcCCCCC-ChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCC
Q 014172 168 ILQAVLAVCSPGDEVI-IPAPFWV-SYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVY 245 (429)
Q Consensus 168 l~~~l~~l~~~gd~Vl-v~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~ 245 (429)
+++++..++ +||+++ +..-.|. .+...++..|+++..++.+..+.+.++++. + +++++++|.+++..|.||+++
T Consensus 82 ~n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~--~-l~~~t~lv~~~~~e~~tG~~~ 157 (361)
T 3m5u_A 82 FAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV--E-FSDNADYAYICSNNTIYGTQY 157 (361)
T ss_dssp HHHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC--C-CCTTSSEEEEESEETTTTEEC
T ss_pred HHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh--h-cCCCCCEEEEeCCCCCcceeC
Confidence 999999998 888653 2222222 223456678999999998754333246666 3 888999999998888999987
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHH
Q 014172 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN 325 (429)
Q Consensus 246 ~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~ 325 (429)
+. ++ ++ ++++++|.+.+. +..+..+.. -.+++.|..|.+|.+| +|+++.++++.+.+.
T Consensus 158 ~~--------i~-~~-~~~~~vD~~q~~----g~~~id~~~------~d~~~~s~~K~~gp~G--~g~l~~~~~~~~~~~ 215 (361)
T 3m5u_A 158 QN--------YP-KT-KTPLIVDASSDF----FSRKVDFSN------IALFYGGVQKNAGISG--LSCIFIRKDMLERSK 215 (361)
T ss_dssp SS--------CC-CC-SSCEEEECGGGT----TSSCCCCTT------EEEEEEETTTTSSCTT--CEEEEEEHHHHHHHH
T ss_pred Cc--------cc-cc-CCEEEEEccccc----CCCCCCccc------CCEEEEechhccCCCc--cEEEEEcHHHHhhhc
Confidence 72 23 36 899999999875 333333322 2378889999998777 799999988876654
Q ss_pred H-----------H--hhcccCCCchHHHHHHHHHHhcCCCChH--HHHHHHHHHHHHHHHHHHHhccCCCc-eeec-C--
Q 014172 326 K-----------I--QSQFTSGASSISQKAGVAALGLGYAGGE--VVSKMVKAFRERRDFLVKSFGELEGV-KMSE-P-- 386 (429)
Q Consensus 326 ~-----------~--~~~~~~~~~~~~q~aa~~~l~~~~~~~~--~~~~~~~~~~~~r~~l~~~L~~l~g~-~~~~-p-- 386 (429)
. . ......+++.....++.++++. ..+ .++++.++.++.++++++.|++++|+ .... +
T Consensus 216 ~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~---l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~ 292 (361)
T 3m5u_A 216 NKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDW---LLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKD 292 (361)
T ss_dssp TCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHH---HHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGG
T ss_pred CCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHH---HHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHH
Confidence 3 0 1111234566666666677764 222 37888899999999999999999766 5432 2
Q ss_pred CceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 387 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.....+.+.+++.. .-..++...| ++.||.+
T Consensus 293 rs~~ivsf~~~~~~----------~~~~~~~~~L-~~~gI~~ 323 (361)
T 3m5u_A 293 RSLMNVSFNIAKNK----------DLEPLFVKEA-EEAGMIG 323 (361)
T ss_dssp BCSSEEEEEESSCT----------THHHHHHHHH-HHTTEEC
T ss_pred cCCeEEEEECCCch----------hhhHHHHHHH-HHCCCEE
Confidence 22344667776410 0124677655 5559875
No 229
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.66 E-value=3.8e-15 Score=148.85 Aligned_cols=258 Identities=16% Similarity=0.162 Sum_probs=166.6
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 92 ~~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
..|+.+||+..|. ..++- +|++.+++.++++++.+...+..-..+|.+.|++.+ + ..+.|+++++++++.
T Consensus 84 ~dG~~ylD~~~g~~~~~lGH~hp~v~~Av~~q~~~~~~~~~~~~~~~~lae~l~~~~----p---~~~~v~f~~SGsEA~ 156 (454)
T 4ao9_A 84 ADGHRYADFIAEYTAGVYGHSAPEIRDAVIEAMQGGINLTGHNLLEGRLARLICERF----P---QIEQLRFTNSGTEAN 156 (454)
T ss_dssp TTCCEEEESSGGGGTTTTCSCCHHHHHHHHHHHHTCSCCCSEESSHHHHHHHHHHHS----T---TCSEEEEESSHHHHH
T ss_pred CCCCEEEEccccHHhhcccCCCHHHHHHHHHHHhcCCCccCCcHHHHHHHHHHHHhC----C---CCCEEEEeCchHHHH
Confidence 3678899998775 33443 799999999998875433333333345555555543 2 457999999999999
Q ss_pred HHHHHHhcC--CCCEEEEcCCCCCChHHHHH------HcCCEEEEecCCCCCCCCCCHHHHHhhccc---CCcEEEEcCC
Q 014172 169 LQAVLAVCS--PGDEVIIPAPFWVSYPEMAR------IADATPVILPTRISENFLLDPKVLESKLTE---KSRLLILCSP 237 (429)
Q Consensus 169 ~~~l~~l~~--~gd~Vlv~~p~y~~~~~~~~------~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~---~~~~i~l~~p 237 (429)
..+++.... ..++|+..+-+|.+....+. ........+|. + |++.+++.+.. ++.+|++...
T Consensus 157 e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~---n----d~~~l~~~l~~~~~~iAavIvEPv 229 (454)
T 4ao9_A 157 LMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY---N----DAQTARAQIERHGPEIAVVLVEPM 229 (454)
T ss_dssp HHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT---T----CHHHHHHHHHHTGGGEEEEEECSE
T ss_pred HHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC---c----hHHHHHHHHhhcCCceEEEEeccc
Confidence 999887642 23678888888876432211 11123334442 1 78888888753 4556666544
Q ss_pred CCCccCCC-CHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEc
Q 014172 238 SNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG 316 (429)
Q Consensus 238 ~NPtG~~~-~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~ 316 (429)
+...|.+. +++.+++|.++|++| |+++|.||++.+ .. +.. .....+.-..| +.+++|.+| .|+.+|.+++
T Consensus 230 ~g~~G~~~p~~~fL~~lr~lc~~~-g~lLI~DEV~tG-R~-G~~-~a~e~~gv~PD----i~t~gK~lg-gG~Piga~~~ 300 (454)
T 4ao9_A 230 QGASGCIPGQPDFLQALRESATQV-GALLVFDEVMTS-RL-APH-GLANKLGIRSD----LTTLGKYIG-GGMSFGAFGG 300 (454)
T ss_dssp ESTTTCEECCHHHHHHHHHHHHHH-TCEEEEECTTGG-GG-STT-CHHHHHTCCCS----EEEEEGGGG-TTSSCEEEEE
T ss_pred cCCCCccCCchhhHHHHHHHHhhc-CCEEEEECCCcC-CC-ccc-cchhccCCCCc----EEEeccccC-CCCcceeeee
Confidence 55577554 577899999999999 999999999974 22 211 11111111112 456899998 8899999999
Q ss_pred CHHHHHHHHHHh----hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 014172 317 PKHFVAACNKIQ----SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 377 (429)
Q Consensus 317 ~~~~~~~l~~~~----~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 377 (429)
.+++++.+.... ...+++.++++.+++.+.|+.-. .++.+ +..+++-+++.++|++
T Consensus 301 ~~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~-~~~~~----~~~~~~g~~l~~~L~~ 360 (454)
T 4ao9_A 301 RADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLF-TPEAA----GALAERGEALRARLNA 360 (454)
T ss_dssp CHHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTS-CHHHH----HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHh-ccChh----HHHHHHHHHHHHHHHH
Confidence 999988775321 23455678889999998887522 13333 3344444444444443
No 230
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.65 E-value=7e-16 Score=151.61 Aligned_cols=277 Identities=9% Similarity=0.050 Sum_probs=178.3
Q ss_pred CChHHHHHHHHHHHHcCC---------CCCCC--CCCCHHHHHHHHHHHHhhcCCCCC-CCcEEE-ecChHHHHHHHHHH
Q 014172 108 DTPVLIAEAGINAIREGF---------TRYTP--NAGTLELRSAICHKLKEENGLSYT-PDQILV-SNGAKQSILQAVLA 174 (429)
Q Consensus 108 ~~p~~v~~a~~~~~~~~~---------~~Y~~--~~G~~~lr~~ia~~l~~~~g~~~~-~~~i~~-t~G~~~al~~~l~~ 174 (429)
+.|++|++++.+.+.+.. ...++ ..-..+.|+.++++++ .+ +++|++ |.|+|+++++++..
T Consensus 37 ~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~------~~~~~evif~t~~~T~a~n~ai~~ 110 (386)
T 3qm2_A 37 MLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLN------IPSNYKVLFCHGGGRGQFAGVPLN 110 (386)
T ss_dssp CCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHT------CCTTEEEEEEESCTTHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhC------CCCCceEEEEcCCchHHHHHHHHh
Confidence 468899999877653210 01111 1345678888888874 23 247888 68999999999999
Q ss_pred hcCCCCEEEEcCCCCCC--hHHHHHHcCCEEEEecCC-CCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCC-CCHHHH
Q 014172 175 VCSPGDEVIIPAPFWVS--YPEMARIADATPVILPTR-ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSV-YPKNLL 250 (429)
Q Consensus 175 l~~~gd~Vlv~~p~y~~--~~~~~~~~g~~~~~v~~~-~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~-~~~~~l 250 (429)
++++||+|++..-++.+ +...++..| ++..++.+ .+.+..++++.++.++++++++|.+++..|.||++ .| +
T Consensus 111 l~~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~~h~et~tG~~i~p---i 186 (386)
T 3qm2_A 111 LLGDKTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSDNAAYLHYCPNETIDGIAIDE---T 186 (386)
T ss_dssp HCTTCCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCTTCSCEEECSEETTTTEECCC---C
T ss_pred ccCCCCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCCCCcEEEEECCcCCcCEecCc---h
Confidence 99999997654433333 234456678 89888875 12333368888888999999999998888899996 77 5
Q ss_pred HHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhcccccceeeEEEcCHHHHHHHH-----
Q 014172 251 DEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN----- 325 (429)
Q Consensus 251 ~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~~~~~~l~----- 325 (429)
++|. + ++++++|.+++. |..+..+..+ + +.+.|..|.+|.+| +|+++.++++.+.+.
T Consensus 187 ~~i~-----~-g~~~~vDa~qs~----g~~pidv~~~----~--~~~~s~hK~lGP~G--~g~l~v~~~~~~~~~~~~p~ 248 (386)
T 3qm2_A 187 PDFG-----P-EVVVTADFSSTI----LSAPLDVSRY----G--VIYAGAQKNIGPAG--LTLVIVREDLLGKAHESCPS 248 (386)
T ss_dssp CCCC-----T-TCCEEEECTTTT----TSSCCCGGGC----S--EEEEETTTTTCCTT--EEEEEEEGGGCSCCCTTSCG
T ss_pred hhhc-----C-CCEEEEEccccc----CCCCCCcccc----C--EEEEecccccCCCc--cEEEEECHHHHhhhcccCCc
Confidence 5553 7 899999999876 3334444433 2 46688999998777 788888766532111
Q ss_pred -----HH-h-hcccCCCchHHHHHHHHHHhcCCCChH--HHHHHHHHHHHHHHHHHHHhccCCCc-eee-c--CCceEEE
Q 014172 326 -----KI-Q-SQFTSGASSISQKAGVAALGLGYAGGE--VVSKMVKAFRERRDFLVKSFGELEGV-KMS-E--PQGAFYL 392 (429)
Q Consensus 326 -----~~-~-~~~~~~~~~~~q~aa~~~l~~~~~~~~--~~~~~~~~~~~~r~~l~~~L~~l~g~-~~~-~--p~~~~~~ 392 (429)
.. . .....+++.+...++.++++. ..+ .++++.++.++.++++++.|+++ |+ ... . ..+...+
T Consensus 249 ~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~---~~~~gG~~~i~~~~~~l~~~l~~~l~~~-~~~~~~~~~~~rs~~iv 324 (386)
T 3qm2_A 249 ILDYTVLNDNDSMFNTPPTFAWYLSGLVFKW---LKAQGGVAAMHKINQQKAELLYGVIDNS-DFYRNDVAQANRSRMNV 324 (386)
T ss_dssp GGCHHHHHHC-------CCSHHHHHHHHHHH---HHHHTHHHHHHHHHHHHHHHHHHHHHTC-SSEECCBCGGGBCSSEE
T ss_pred HHHHHHHhhcCCCCCCCcHHHHHHHHHHHHH---HHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCHHHcCceEE
Confidence 11 1 111123555566666666664 233 48888899999999999999988 55 221 1 1233456
Q ss_pred EEecCCccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 393 FIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 393 ~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
.+.+++. + -..++..+| ++.||.+
T Consensus 325 ~f~~~~~-~----------~~~~~~~~L-~~~gI~~ 348 (386)
T 3qm2_A 325 PFQLADN-T----------LDKVFLEES-FAAGLHA 348 (386)
T ss_dssp EEEESSG-G----------GHHHHHHHH-HHTTEEC
T ss_pred EEECCCc-c----------ccHHHHHHH-HHCCCEE
Confidence 6777641 0 135677775 4558875
No 231
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.62 E-value=2.7e-14 Score=139.37 Aligned_cols=325 Identities=14% Similarity=0.070 Sum_probs=199.2
Q ss_pred cccccccCCchhHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCC------CCCCC-CCCCHHHHHHH
Q 014172 69 SPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGF------TRYTP-NAGTLELRSAI 141 (429)
Q Consensus 69 s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~g~~~~~~p~~v~~a~~~~~~~~~------~~Y~~-~~G~~~lr~~i 141 (429)
+..++...|.....|.....+.+ .-|.|=..++. +++.+.+++-..+.+.+ .+|.. ..-..++....
T Consensus 32 ~~~l~~~Dpei~~~i~~E~~RQ~----~~ieLIASEN~--~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la 105 (490)
T 3ou5_A 32 QESLSDSDPEMWELLQREKDRQC----RGLELIASENF--CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLC 105 (490)
T ss_dssp CCCHHHHCHHHHHHHHHHHHHHH----HSEECCTTCCC--CCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHH
T ss_pred ccchhhhCHHHHHHHHHHHHHHH----cCceEecCCCc--CCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHH
Confidence 44555555544433333333322 35888888876 45677777776665422 12222 22234555555
Q ss_pred HHHHHhhcCCCCCCC--cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHH--------HHcCC--EEEEecCC
Q 014172 142 CHKLKEENGLSYTPD--QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA--------RIADA--TPVILPTR 209 (429)
Q Consensus 142 a~~l~~~~g~~~~~~--~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~--------~~~g~--~~~~v~~~ 209 (429)
.++..+.||.....+ ||-.- +++.+...++.++++|||+|+-.+..+.++...- ...|. +.+.++++
T Consensus 106 ~~rak~lF~a~~A~w~VNVQP~-SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd 184 (490)
T 3ou5_A 106 QRRALEAFDLDPAQWGVNVQPY-SGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLN 184 (490)
T ss_dssp HHHHHHHTTCCTTTEEEECCCS-SHHHHHHHHHHHHCC-CCCEECBC----------------------------CBCEE
T ss_pred HHHHHHHhCCCccccCCCCCcC-CHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccC
Confidence 677778888654433 44444 4556677799999999999999998777665322 12222 34455555
Q ss_pred CCCCCCCCHHHHHhhccc-CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcc-cccCCCCCCccccC
Q 014172 210 ISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPATHTSFASL 287 (429)
Q Consensus 210 ~~~~~~~d~e~l~~~l~~-~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~-~~~~~~~~~~~~~~ 287 (429)
++ +..+|.|++++.... ++|+|+.-.-.+| ..++ ++++.++|++. |.+++.|-+|.. ++-+| .+++....
T Consensus 185 ~~-t~~IDyd~~~~~A~~~kPklIi~G~SaY~--r~id---~~~~reIAd~v-GA~Lm~DmAHiaGLVA~g-~~psP~~~ 256 (490)
T 3ou5_A 185 PK-TGLIDYNQLALTARLFRPRLIIAGTSAYA--RLID---YARMREVCDEV-KAHLLADMAHISGLVAAK-VIPSPFKH 256 (490)
T ss_dssp TT-TTEECHHHHHHHHHHHCCSEEEECCSSCC--SCCC---HHHHHHHHHHH-TCEEEEECGGGHHHHHTT-SSCCGGGT
T ss_pred CC-CCcccHHHHHHHHhhcCCCeEEECCccCc--cccC---HHHHHHHHhhc-ccEEEechhhhhhhhccc-ccCCcccc
Confidence 43 467999999987754 8999886333333 3556 88888899998 999999999874 33333 33333322
Q ss_pred CCCCCceEEEeccChhcccccceeeEEEcCH---------------HHHHHHHHHhhcccCCCchHHHHHHHH-HHhcCC
Q 014172 288 PGMWERTLTVNGFSKAFAMTGWRLGYIAGPK---------------HFVAACNKIQSQFTSGASSISQKAGVA-ALGLGY 351 (429)
Q Consensus 288 ~~~~~~~i~~~S~SK~~~~~G~R~G~v~~~~---------------~~~~~l~~~~~~~~~~~~~~~q~aa~~-~l~~~~ 351 (429)
..|+..|.+|+| +|.|.|.+++.+ ++.+.+.+...+...+.+..-..|+.+ ++...
T Consensus 257 -----ADvVTtTTHKTL--rGPrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea- 328 (490)
T 3ou5_A 257 -----ADIVTTTTHKTL--RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQA- 328 (490)
T ss_dssp -----CSEEEEESSSTT--CSCSCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHH-
T ss_pred -----ceEEeccccccc--cCCCceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHH-
Confidence 238899999998 799999999765 466777776665555555444444443 23321
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhccCCCceeec-CCceEEEEEecCCccCCcccCCCCCCChHHHHHHHHHhCCeecC
Q 014172 352 AGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVLLH 429 (429)
Q Consensus 352 ~~~~~~~~~~~~~~~~r~~l~~~L~~l~g~~~~~-p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 429 (429)
.....+...+...++.+.|.+.|.+. |++++. ...+..+++++... + -...-++++|++.||.++
T Consensus 329 -~~p~fk~Ya~qVv~NAkaLA~~L~~~-G~~vvsGgTdnHlvLvDl~~~-g----------~tG~~ae~~Le~agItvN 394 (490)
T 3ou5_A 329 -CTPMFREYSLQVLKNARAMADALLER-GYSLVSGGTDNHLVLVDLRPK-G----------LDGARAERVLELVSITAN 394 (490)
T ss_dssp -HSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGG-T----------CCHHHHHHHHHHTTEECE
T ss_pred -HhHhHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCCCceEEEEecccc-C----------CCHHHHHHHHHHcCcEEC
Confidence 13456778888889999999999987 888863 34456688888643 1 234666677888899874
No 232
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.55 E-value=3.6e-14 Score=139.07 Aligned_cols=248 Identities=19% Similarity=0.191 Sum_probs=163.9
Q ss_pred HHHHHHH-HHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCC----CCEEEEcCCCCCChHHHHHHcCCEEEEecCCC
Q 014172 136 ELRSAIC-HKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSP----GDEVIIPAPFWVSYPEMARIADATPVILPTRI 210 (429)
Q Consensus 136 ~lr~~ia-~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~----gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~ 210 (429)
.|.+.++ +|+. ..|++ .....++++|+|.++..++.+.+++ ||.||++..+|.+....+.++|+++++++...
T Consensus 116 ~ltn~l~ld~L~-~~G~~-~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~ 193 (501)
T 3hl2_A 116 KITNSLVLDIIK-LAGVH-TVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVL 193 (501)
T ss_dssp HHHHHHHHHHHH-HTTCT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEE
T ss_pred HHHHHHHHHHHH-HcCCC-CCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeee
Confidence 4555555 4554 44865 3357999999998888777777764 49999999999999999999999999997632
Q ss_pred C-CCCCCCHHHHHhhccc---CCcEEEEc-CCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccc-cCCCCCCcc
Q 014172 211 S-ENFLLDPKVLESKLTE---KSRLLILC-SPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII-YAPATHTSF 284 (429)
Q Consensus 211 ~-~~~~~d~e~l~~~l~~---~~~~i~l~-~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~-~~~~~~~~~ 284 (429)
+ +...+|++.|+++|++ +..++++. .+.|-.|.+-+ +++|+++|++| |+++++|+||+... +....+.+.
T Consensus 194 d~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~dd---I~eIaeIch~~-gIpllVDeAhGah~~~~~~lp~sA 269 (501)
T 3hl2_A 194 EGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDR---LEELAVICANY-DIPHIVNNAYGVQSSKCMHLIQQG 269 (501)
T ss_dssp ETTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCC---HHHHHHHHHHH-TCCEEEECTTCTTCHHHHHHHHHH
T ss_pred cccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCccccc---HHHHHHHHHHc-CCeEEEeCcchhhhhhhhhhHHHH
Confidence 2 3467899999999964 33444444 44554456667 99999999999 99999999998532 211111122
Q ss_pred ccCCCCCCceEEEeccChhcccccceeeEEEc-CHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHH
Q 014172 285 ASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (429)
Q Consensus 285 ~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~-~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~ 363 (429)
.++. .-++++.|.+|.+-++ +..|.+.. ++++++.+........ ...++....+..+.. +.+.++++.++
T Consensus 270 ~~~G---rAD~vVqS~HK~llvp-IGG~ii~~~d~e~l~~~~~~yPGr~--S~Spsldl~~tLL~l---Gr~Gy~~ll~e 340 (501)
T 3hl2_A 270 ARVG---RIDAFVQSLDKNFMVP-VGGAIIAGFNDSFIQEISKMYPGRA--SASPSLDVLITLLSL---GSNGYKKLLKE 340 (501)
T ss_dssp HHHS---CCCEEEEEHHHHHCCC-SSCEEEEESCHHHHHHHHHTSCSCB--CSHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred HhcC---CCcEEEecccccceee-cCceEEEeCCHHHHHHHHHhCCCCC--CCcHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 2221 1458999999998544 22234433 5667777644321111 234444344555554 46777888888
Q ss_pred HHHHHHHHHHHhccCC---Cceee-cCCceEEEEEecCC
Q 014172 364 FRERRDFLVKSFGELE---GVKMS-EPQGAFYLFIDFST 398 (429)
Q Consensus 364 ~~~~r~~l~~~L~~l~---g~~~~-~p~~~~~~~~~l~~ 398 (429)
..++.+++.+.|+++. |-++. .|...+-+-+.+..
T Consensus 341 ~~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~ 379 (501)
T 3hl2_A 341 RKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKT 379 (501)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTT
T ss_pred HHHHHHHHHHHHHHHHHhcChhhcCCCCCceeEEEeccc
Confidence 8888899999888852 33443 23344555566653
No 233
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.54 E-value=5.4e-14 Score=139.33 Aligned_cols=238 Identities=17% Similarity=0.141 Sum_probs=158.7
Q ss_pred CCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCC----CCEEEEcCCCCCChHHHHHHcCCEEEEecC
Q 014172 133 GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSP----GDEVIIPAPFWVSYPEMARIADATPVILPT 208 (429)
Q Consensus 133 G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~----gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~ 208 (429)
+...+.+.+..++.+..|++ .....++++|+|.+..+++.+.+++ ++.|+++.-+|.+...++.++|++++.++.
T Consensus 95 ~~~~~e~~~~~~~~~~lGlp-~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~ 173 (450)
T 3bc8_A 95 LLNKITNSLVLNVIKLAGVH-SVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIEN 173 (450)
T ss_dssp HHHHHHHHHHHHHHHHHTCT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHhCCCC-CCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEe
Confidence 34567778888888888864 2345688888885555555555443 899999999999999999999999999976
Q ss_pred CC-CCCCCCCHHHHHhhccc---CCcEEEEcCCC-CCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCcccc-cCCCCCC
Q 014172 209 RI-SENFLLDPKVLESKLTE---KSRLLILCSPS-NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII-YAPATHT 282 (429)
Q Consensus 209 ~~-~~~~~~d~e~l~~~l~~---~~~~i~l~~p~-NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~-~~~~~~~ 282 (429)
.+ ++.+.+|++.|+++|++ +.+++++.+|+ +.+|.+-+ +++|+++|++| |+++++|+||+... +....+.
T Consensus 174 ~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~dd---l~~Ia~ia~~~-gi~l~VD~A~G~~~~~~~~l~~ 249 (450)
T 3bc8_A 174 VLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDR---LEELAVICANY-DIPHVVNNAYGLQSSKCMHLIQ 249 (450)
T ss_dssp EEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCC---HHHHHHHHHHH-TCCEEEECTTTTTCHHHHHHHH
T ss_pred eecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecC---HHHHHHHHHHC-CCeEEEECCCchhhhhhHhHHH
Confidence 32 23567999999999964 34566666664 45678888 99999999999 99999999998522 1100000
Q ss_pred ccccCCCCCCceEEEeccChhcccccceeeEEEc-CHHHHHHHHHHhhcccCCCchHHHHHHHHHHhcCCCChHHHHHHH
Q 014172 283 SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 361 (429)
Q Consensus 283 ~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~v~~-~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~ 361 (429)
..... ..-++++.|.+|++. .-...+++.. +++.++.+..... ......++.......+.. +.+.+.+..
T Consensus 250 ~a~~~---~~AD~~v~S~HK~l~-a~~~~~~l~~rd~~~~~~~~~~~~--g~~s~SpsL~l~~~l~~~---G~~g~~~~i 320 (450)
T 3bc8_A 250 QGARV---GRIDAFVQSLDKNFM-VPVGGAIIAGFNEPFIQDISKMYP--GRASASPSLDVLITLLSL---GCSGYRKLL 320 (450)
T ss_dssp HHHHH---SCCCEEEEEHHHHHS-CCSSCEEEEESCHHHHHHHHHHSC--SCBCSHHHHHHHHHHHHH---HHHHHHHHH
T ss_pred HHhcc---cCCCEEEECCccCCC-chhccEEEEecCHHHHHHHHHHhh--cCCcccHHHHHHHHHHHH---HHHHHHHHH
Confidence 11111 123478899999986 3344566665 5666666544321 112234444444444443 355566666
Q ss_pred HHHHHHHHHHHHHhccCC---Cceee
Q 014172 362 KAFRERRDFLVKSFGELE---GVKMS 384 (429)
Q Consensus 362 ~~~~~~r~~l~~~L~~l~---g~~~~ 384 (429)
++..+..+++.+.+++++ |..+.
T Consensus 321 ~~~~~~a~~l~~~l~~~~~~~g~~~l 346 (450)
T 3bc8_A 321 KERKEMFVYLSTQLKKLAEAHNERLL 346 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCBC
T ss_pred HHHHHHHHHHHHHHHhhHHhcCceec
Confidence 666667777777777765 66554
No 234
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.54 E-value=2.3e-12 Score=129.73 Aligned_cols=318 Identities=13% Similarity=0.088 Sum_probs=186.0
Q ss_pred cCCCeEEcCCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCCC-CHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHH
Q 014172 93 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAG-TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (429)
Q Consensus 93 ~g~~~i~L~~g~~~--~~~-p~~v~~a~~~~~~~~~~~Y~~~~G-~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 168 (429)
.|+.+||+..|... ++- +|++.+++.+.+.+.. .|+...+ ..+....+|+.|.+..+. +.+.|++++++++++
T Consensus 65 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~-~~~~~~~~~~~~~~~lAe~L~~~~p~--~~~~v~f~~sGsEA~ 141 (473)
T 4e3q_A 65 NGRRYLDANSGLWNMVAGFDHKGLIDAAKAQYERFP-GYHAFFGRMSDQTVMLSEKLVEVSPF--DSGRVFYTNSGSEAN 141 (473)
T ss_dssp TCCEEEETTTTTTTCTTCSCCHHHHHHHHHHHHHCC-CCCCCTTEEEHHHHHHHHHHHHHSSC--SSCEEEEESSHHHHH
T ss_pred CCCEEEEcccCHHHhhccCCCHHHHHHHHHHHHhcc-cccccccccCHHHHHHHHHHHhhCCC--CccEEEEeCchHHHH
Confidence 57889999888643 333 7899999999887632 2322222 235555677777665442 346899999999999
Q ss_pred HHHHHHhc-------CCC-CEEEEcCCCCCChHHHHH-HcCC-----------EEEEecCCCC---CCCCCC--------
Q 014172 169 LQAVLAVC-------SPG-DEVIIPAPFWVSYPEMAR-IADA-----------TPVILPTRIS---ENFLLD-------- 217 (429)
Q Consensus 169 ~~~l~~l~-------~~g-d~Vlv~~p~y~~~~~~~~-~~g~-----------~~~~v~~~~~---~~~~~d-------- 217 (429)
+.+++... .++ ..|+...-+|.+....+. ..|- ..+.++.... ....-.
T Consensus 142 e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 221 (473)
T 4e3q_A 142 DTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARL 221 (473)
T ss_dssp HHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHHHHHH
Confidence 99988742 233 578888888887543332 2221 1222322100 000011
Q ss_pred HHHHHhhcc----cCCcEEEEcCCCCCccCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCC
Q 014172 218 PKVLESKLT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 292 (429)
Q Consensus 218 ~e~l~~~l~----~~~~~i~l~~p~NPtG~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~ 292 (429)
.+++++.+. +++.+|++...+.-.|.+ .+++.+++|.++|++| |+++|.||+..+|...|... ....+.-..|
T Consensus 222 ~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~-gilLI~DEV~tGfGRtG~~f-a~e~~gv~PD 299 (473)
T 4e3q_A 222 ARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKY-DIPVISDEVICGFGRTGNTW-GCVTYDFTPD 299 (473)
T ss_dssp HHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHT-TCCEEEECTTTSSSTTSSSC-HHHHTTCCCS
T ss_pred HHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhccc-ceEEeccCccccCCcccchh-HHHhcCCCCC
Confidence 233444442 234455554445556755 4567899999999999 99999999999874433211 1111211112
Q ss_pred ceEEEeccChhccccc-ceeeEEEcCHHHHHHHHHHh-------hcccCCCchHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 014172 293 RTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQ-------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 364 (429)
Q Consensus 293 ~~i~~~S~SK~~~~~G-~R~G~v~~~~~~~~~l~~~~-------~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~ 364 (429)
+-+++|.++ .| ..+|.+++.+++.+.+.... ...+++.++++.+++.+.|+. .++ +++.+..
T Consensus 300 ----i~t~~K~l~-gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~---i~~--~~l~~~~ 369 (473)
T 4e3q_A 300 ----AIISSKNLT-AGFFPMGAVILGPELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDV---VMN--EGLAENV 369 (473)
T ss_dssp ----EEEECGGGG-TTSSCCEEEEECHHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHH---HHH--SSHHHHH
T ss_pred ----hHHhccccc-CCCCCcccccccHHHHHHhccccccccccccCCCCCCCcchhhhhhhhhhh---hcc--ccHHHHH
Confidence 446899998 66 89999999999998876432 234566788888888888874 111 1233333
Q ss_pred HHHHHHHHHHhcc---CCCceeecCCceEEEEEecCCccCCcccCC-CCCCChHHHHHHHHHhCCeec
Q 014172 365 RERRDFLVKSFGE---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGF-GKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 365 ~~~r~~l~~~L~~---l~g~~~~~p~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~Ll~~~gV~v 428 (429)
++.-+++.+.|++ .+.+.-++..|-| +-+++-...... ..+ ....-...+++.++++ ||.+
T Consensus 370 ~~~g~~l~~~L~~l~~~~~v~~vRG~Gl~-~gielv~~~~~~-~~~~~~~~~~~~~~~~~~~~-Gll~ 434 (473)
T 4e3q_A 370 RRLAPRFEERLKHIAERPNIGEYRGIGFM-WALEAVKDKASK-TPFDGNLSVSERIANTCTDL-GLIC 434 (473)
T ss_dssp HHHHHHHHHHHHHHTTSTTEEEEEEETTE-EEEEECSBTTTT-BCCCGGGCHHHHHHHHHHHT-TEEC
T ss_pred HHHHHHHHHHHHHHhcCCCeeEEeecceE-EEEEEecCcccc-ccccccHHHHHHHHHHHHHC-CcEE
Confidence 3444445554444 3455444445544 445542210000 000 0001246788888876 8764
No 235
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.52 E-value=1.3e-12 Score=130.87 Aligned_cols=248 Identities=14% Similarity=0.101 Sum_probs=159.0
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCC-CHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHH
Q 014172 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAG-TLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (429)
Q Consensus 92 ~~g~~~i~L~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G-~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~a 167 (429)
..|+..||+..|. ..++- +|++.+++.+++.+..+ ....+ ..+....+++.+.+.... -..+.++++++++++
T Consensus 61 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~--~~~~~~~~~~~~~lae~L~~~~p~-~~~~~v~f~~sGsEA 137 (456)
T 4atq_A 61 VDGNSFIDLGSGIAVTSVGASDPAVVAAVQEAAAHFTH--TCFMVTPYEGYVAVTEQLNRLTPG-DHAKRTVLFNSGAEA 137 (456)
T ss_dssp TTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSC--CTTTTSCCHHHHHHHHHHHHHSSC-SSCEEEEEESSHHHH
T ss_pred CCCCEEEEccccHHHHhcCCCCHHHHHHHHHHHhhccC--cccCccCcHHHHHHHHHHHHhCCC-CCCcEEEEeCChHHH
Confidence 3678899998874 44554 78999999998876321 11111 123444566666554321 123579999999999
Q ss_pred HHHHHHHhcC--CCCEEEEcCCCCCChHHHHHH-cC-------------CEEEEecCCC----CCCCCCCHHHHHhh---
Q 014172 168 ILQAVLAVCS--PGDEVIIPAPFWVSYPEMARI-AD-------------ATPVILPTRI----SENFLLDPKVLESK--- 224 (429)
Q Consensus 168 l~~~l~~l~~--~gd~Vlv~~p~y~~~~~~~~~-~g-------------~~~~~v~~~~----~~~~~~d~e~l~~~--- 224 (429)
++.+++.... ....|+...-+|.+....+.. .+ ..+..+|... .....-+.+.+++.
T Consensus 138 ~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 217 (456)
T 4atq_A 138 VENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITM 217 (456)
T ss_dssp HHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHH
Confidence 9999887532 337888888888876543322 11 1344454321 01111123333332
Q ss_pred ----ccc-CCcEEEEcCCCCCccCC-CCHHHHHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEe
Q 014172 225 ----LTE-KSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVN 298 (429)
Q Consensus 225 ----l~~-~~~~i~l~~p~NPtG~~-~~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~ 298 (429)
+.+ ++.+|++...+.-.|.+ .+++.+++|.++|++| |+++|.||++.++...|.. .....+.-..| +-
T Consensus 218 ~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~-gillI~DEV~tG~GRtG~~-~a~e~~gv~PD----iv 291 (456)
T 4atq_A 218 IEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEK-GIVFIADEVQSGFCRTGEW-FAVDHEGVVPD----II 291 (456)
T ss_dssp HHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSS-SGGGGTTCCCS----EE
T ss_pred HHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhc-CCceEecccccccCCcccc-ccccccCCCCc----hh
Confidence 222 45555554445556754 5677899999999999 9999999999986444421 12222221122 45
Q ss_pred ccChhcccccceeeEEEcCHHHHHHHHHHhhcccCCCchHHHHHHHHHHhc
Q 014172 299 GFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL 349 (429)
Q Consensus 299 S~SK~~~~~G~R~G~v~~~~~~~~~l~~~~~~~~~~~~~~~q~aa~~~l~~ 349 (429)
+++|.+| .|..+|.+++.+++.+.+.......+++.++++.+++.+.|+.
T Consensus 292 t~gK~lg-gg~P~~av~~~~~i~~~~~~~~~~~Tf~gnpla~aaala~L~~ 341 (456)
T 4atq_A 292 TMAKGIA-GGLPLSAITGRADLLDAVHPGGLGGTYGGNPVACAAALAAIDT 341 (456)
T ss_dssp EECGGGG-TTSSCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHH
T ss_pred hhhhccc-CcCCceeeEecHHHHhcccccCCCCCCCCChHHHHhhHHHHHH
Confidence 6899998 8999999999999988876655566777899999999988874
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.43 E-value=7e-13 Score=142.09 Aligned_cols=317 Identities=13% Similarity=0.068 Sum_probs=184.2
Q ss_pred CeEEcCCCC--CCCCC--hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHH
Q 014172 96 SVIRLAAGE--PDFDT--PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 171 (429)
Q Consensus 96 ~~i~L~~g~--~~~~~--p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~ 171 (429)
.+||+..|. ..++. +|++.+++.+++.+-.+ +.......+....+++.|.+..+.. ..+.|+++++++++++.+
T Consensus 381 ~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~l~h-~~~~~~~~~~~~~Lae~L~~~~p~~-~l~~vff~~SGSeA~E~A 458 (831)
T 4a0g_A 381 QQFDACASWWTQGPDPTFQAELAREMGYTAARFGH-VMFPENVYEPALKCAELLLDGVGKG-WASRVYFSDNGSTAIEIA 458 (831)
T ss_dssp EEEETTHHHHTCCCCHHHHHHHHHHHHHHHHHHSS-CCCTTEECHHHHHHHHHHHHTTTTT-TCCEEEEESSHHHHHHHH
T ss_pred heeeecccHhhcCCCCCCCHHHHHHHHHHHhhccc-ccccccCCHHHHHHHHHHHHhCCCC-CCCEEEECCChhHHHHHH
Confidence 578887763 33443 68999999988865211 1111122345556777776654411 136899999999999988
Q ss_pred HHHhc-----CCC------------CEEEEcCCCCCChH-HHHHHcCCE---------------E-------------EE
Q 014172 172 VLAVC-----SPG------------DEVIIPAPFWVSYP-EMARIADAT---------------P-------------VI 205 (429)
Q Consensus 172 l~~l~-----~~g------------d~Vlv~~p~y~~~~-~~~~~~g~~---------------~-------------~~ 205 (429)
++... ..| .+||..+-+|.+-. ..+...|.. + ..
T Consensus 459 lK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 538 (831)
T 4a0g_A 459 LKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWN 538 (831)
T ss_dssp HHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEE
T ss_pred HHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCCceE
Confidence 88762 222 36888888777543 444443321 0 01
Q ss_pred ecCCCC------C--CCCCC------------------HHHHHhhcc--------cCCcEEEEcCC-CCCccCCC-CHHH
Q 014172 206 LPTRIS------E--NFLLD------------------PKVLESKLT--------EKSRLLILCSP-SNPTGSVY-PKNL 249 (429)
Q Consensus 206 v~~~~~------~--~~~~d------------------~e~l~~~l~--------~~~~~i~l~~p-~NPtG~~~-~~~~ 249 (429)
++.... + .+. + .+.|++.+. +++.+|++... ++..|... +++.
T Consensus 539 ~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~ 617 (831)
T 4a0g_A 539 ISLPESFSEIAPEYGTFT-SRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLF 617 (831)
T ss_dssp EECCTTSCCCCSSTTEES-CHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHHH
T ss_pred ecCCcccccccccccccc-chhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHH
Confidence 111100 0 000 1 256777764 23455555543 67777655 7888
Q ss_pred HHHHHHHHHhCCCeEEEEccCCcccccCCCCCCccccCCCCCCceEEEeccChhccccc-ceeeEEEcCHHHHHHHHHHh
Q 014172 250 LDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQ 328 (429)
Q Consensus 250 l~~I~~~a~~~~~i~vi~Deay~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~R~G~v~~~~~~~~~l~~~~ 328 (429)
+++|.++|++| |+++|.||++.+|...|... ....+.-..+ +.+|+|.++ .| +++|++++++++++.+....
T Consensus 618 L~~l~~lc~~~-gilLI~DEV~tGfGRtG~~f-a~e~~gv~PD----iitlsK~L~-gG~~Plgav~~~~~i~~~~~~~~ 690 (831)
T 4a0g_A 618 QRVLVNECRNR-KIPVIFDEVFTGFWRLGVET-TTELLGCKPD----IACFAKLLT-GGMVPLAVTLATDAVFDSFSGDS 690 (831)
T ss_dssp HHHHHHHHHHT-TCCEEEECTTTTTTTTSBSS-THHHHSSCCS----EEEECGGGG-TTSSCCEEEEECHHHHHTTCSSC
T ss_pred HHHHHHHHHHc-CCeEEEEcCccccccCCCch-hhHhcCCCCc----EEEEecccc-cCccCcEEEEECHHHHHHHhccc
Confidence 99999999999 99999999999875555322 1212211112 347999998 67 89999999999998875421
Q ss_pred ------hcccCCCchHHHHHHHHHHhcCCCChHHHHHH---HHHHHH-HHHHHHHHhccCCCceeecCCceEEEEEecCC
Q 014172 329 ------SQFTSGASSISQKAGVAALGLGYAGGEVVSKM---VKAFRE-RRDFLVKSFGELEGVKMSEPQGAFYLFIDFST 398 (429)
Q Consensus 329 ------~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~---~~~~~~-~r~~l~~~L~~l~g~~~~~p~~~~~~~~~l~~ 398 (429)
...+++.++++++++.++|+.-. .++..++. .+.+++ .++.+.+.+.+.+.+..++..|.| +.+.+..
T Consensus 691 ~~~~~~hg~T~~g~Pla~Aaala~L~~i~-~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vrg~Gl~-~~iel~~ 768 (831)
T 4a0g_A 691 KLKALLHGHSYSAHAMGCATAAKAIQWFK-DPETNHNITSQGKTLRELWDEELVQQISSHSAVQRVVVIGTL-FALELKA 768 (831)
T ss_dssp GGGSCCCCCTTTTCHHHHHHHHHHHHHHH-CTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEEEETTE-EEEEEC-
T ss_pred ccccceeecCCcccHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEeecccE-EEEEEec
Confidence 23456678899988888886410 01111111 111111 012344555566666666666665 5555532
Q ss_pred ccCCcccCCCCCCChHHHHHHHHHhCCeec
Q 014172 399 YYGSEAEGFGKIENSESLCRYLLDKAQVLL 428 (429)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 428 (429)
... ..++ ......+++++|+++ ||.+
T Consensus 769 ~~~--~~~~-~~~~a~~~~~~l~e~-Gv~v 794 (831)
T 4a0g_A 769 DAS--NSGY-ASLYAKSLLIMLRED-GIFT 794 (831)
T ss_dssp -----------CHHHHHHHHHHHHT-TEEC
T ss_pred Ccc--cccc-chHHHHHHHHHHHHC-CcEE
Confidence 100 0000 001256788888876 8876
No 237
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=80.90 E-value=4.5 Score=36.83 Aligned_cols=97 Identities=8% Similarity=0.029 Sum_probs=60.1
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------ 227 (429)
+..-++||.|++..-..+...|.+.|..|++..-.-......++..|.+...+..+- -|.+++++.++.
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADS-----ANLAELDRLYEKVKAEAG 102 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecC-----CCHHHHHHHHHHHHHHcC
Confidence 445567777766655666777889998888776443334455666777777776643 256666665542
Q ss_pred CCcEEEEcCC-CCCccC--CCCHHHHHHHHHH
Q 014172 228 KSRLLILCSP-SNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 228 ~~~~i~l~~p-~NPtG~--~~~~~~l~~I~~~ 256 (429)
+... +++|. .++.+. -++.++|+++.++
T Consensus 103 ~iDi-LVNNAG~~~~~~~~~~~~e~w~~~~~v 133 (273)
T 4fgs_A 103 RIDV-LFVNAGGGSMLPLGEVTEEQYDDTFDR 133 (273)
T ss_dssp CEEE-EEECCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred CCCE-EEECCCCCCCCChhhccHHHHHHHHHH
Confidence 3333 44444 333332 3577889888876
No 238
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=79.10 E-value=7.7 Score=34.30 Aligned_cols=98 Identities=14% Similarity=0.097 Sum_probs=58.7
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------ 227 (429)
....++||.|+...-..+.+.|.+.|..|++..-.-..........|.++..+..+- -|.+.+++.++.
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 79 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADI-----SDPGSVKALFAEIQALTG 79 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCC-----CCHHHHHHHHHHHHHHCC
Confidence 345677777766555566777888898888766443334445555577777776643 266666665542
Q ss_pred CCcEEEEcCCCCCccC--CCCHHHHHHHHHH
Q 014172 228 KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~--~~~~~~l~~I~~~ 256 (429)
+...++-+....+.+. ..+.++++++.++
T Consensus 80 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 110 (247)
T 3rwb_A 80 GIDILVNNASIVPFVAWDDVDLDHWRKIIDV 110 (247)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 4566554443333332 3466777766554
No 239
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=76.88 E-value=6.5 Score=39.32 Aligned_cols=114 Identities=12% Similarity=0.177 Sum_probs=66.7
Q ss_pred cCCCCCCCcEEEecChHHHHHHHHHHh---cCC---------C-C-----EEEEcCCCCCC-------------------
Q 014172 149 NGLSYTPDQILVSNGAKQSILQAVLAV---CSP---------G-D-----EVIIPAPFWVS------------------- 191 (429)
Q Consensus 149 ~g~~~~~~~i~~t~G~~~al~~~l~~l---~~~---------g-d-----~Vlv~~p~y~~------------------- 191 (429)
|.+.++++.|.++.++..+++..++.| +.. | . ..+...|.|.-
T Consensus 124 Y~L~v~~~~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~g~~~~lp~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~ 203 (525)
T 3gh5_A 124 YDLITTSNQVTLTANKPEGVFRGNQTLLQLLPAGIEKNTVVSGVQWVIPHSNISDKPEYEYRGLMLDVARHFFTVDEVKR 203 (525)
T ss_dssp EEEEECSSEEEEEESSHHHHHHHHHHHHHHSCTTTTCSSCCCSCCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHH
T ss_pred eEEEEeCCEEEEEECCHHHHHHHHHHHHHHHhhhccccccccCcceeccceEEeecCCcceeccccCCCCCCCCHHHHHH
Confidence 344567788999988887777676665 222 1 1 23456666542
Q ss_pred hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEE
Q 014172 192 YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 267 (429)
Q Consensus 192 ~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~ 267 (429)
+.+.+...+.++....+..+.+|.+..+...++-..... .......|-.|+++++++|++.|+++ ++-||-
T Consensus 204 ~id~mA~~KlN~lH~HltDdqgwriei~~~P~Lt~~Ga~----~~~~~~~~g~YT~~di~eIv~YA~~r-gI~VIP 274 (525)
T 3gh5_A 204 QIDLASQYKINKFHMHLSDDQGWRIEIKSWPDLIEIGSK----GQVGGGPGGYYTQEQFKDIVSYAAER-YIEVIP 274 (525)
T ss_dssp HHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTS----CCTTSSCCCCBCHHHHHHHHHHHHTT-TCEEEE
T ss_pred HHHHHHHcCCcEEEEEeccCCccccccccchhhhhccCc----cccCCCCCCCcCHHHHHHHHHHHHHc-CCEEEE
Confidence 233444556666666655444555444333222111000 00112246789999999999999999 898884
No 240
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=76.12 E-value=11 Score=34.04 Aligned_cols=99 Identities=14% Similarity=0.123 Sum_probs=58.0
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-----
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE----- 227 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~----- 227 (429)
+....++||.|+...-..+...|.+.|..|++..-.-..........+.++..+..+- -|.+.+++.++.
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 99 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDV-----SSAKDAESMVEKTTAKW 99 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecC-----CCHHHHHHHHHHHHHHc
Confidence 3445677777666555566777888898887765443333444555676776666543 266666665542
Q ss_pred -CCcEEEEcCCCCCccC--CCCHHHHHHHHHH
Q 014172 228 -KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 228 -~~~~i~l~~p~NPtG~--~~~~~~l~~I~~~ 256 (429)
+...++-+....+.+. ..+.++++++.++
T Consensus 100 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 131 (277)
T 4dqx_A 100 GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSV 131 (277)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 4555554433333332 3567777766553
No 241
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=74.87 E-value=12 Score=33.17 Aligned_cols=98 Identities=10% Similarity=0.011 Sum_probs=49.8
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------ 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-.......+..+.++..+..+- -|.+.+++.++.
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 80 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADV-----TNEADATAALAFAKQEFG 80 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccC-----CCHHHHHHHHHHHHHHcC
Confidence 445677777766555566777888898887765444444444444555666665532 256666665542
Q ss_pred CCcEEEEcCCCCCccC------CCCHHHHHHHHHH
Q 014172 228 KSRLLILCSPSNPTGS------VYPKNLLDEIARI 256 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~------~~~~~~l~~I~~~ 256 (429)
+...++-+....+.+. ..+.+++++..++
T Consensus 81 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~v 115 (257)
T 3tpc_A 81 HVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAV 115 (257)
T ss_dssp CCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCccccccccCCHHHHHHHHHH
Confidence 4555554333232222 3466777766654
No 242
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=72.56 E-value=15 Score=32.85 Aligned_cols=98 Identities=10% Similarity=0.072 Sum_probs=58.4
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChH---HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc--
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTE-- 227 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-- 227 (429)
++-..+++|.|++.--..+...|.+.|..|++.+-.-.... ..++..|.++..+..|-. |.+++++.++.
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~-----~~~~v~~~~~~~~ 81 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVT-----DELAIEAAFSKLD 81 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTT-----CHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCC-----CHHHHHHHHHHHH
Confidence 44456677766665556667778899999888764322222 233456888888876532 56666655532
Q ss_pred ----CCcEEEEcCC-CCCccC--CCCHHHHHHHHHH
Q 014172 228 ----KSRLLILCSP-SNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 228 ----~~~~i~l~~p-~NPtG~--~~~~~~l~~I~~~ 256 (429)
+...+ ++|. .++.+. -++.++|+++.++
T Consensus 82 ~~~G~iDiL-VNNAG~~~~~~~~~~~~e~~~~~~~v 116 (255)
T 4g81_D 82 AEGIHVDIL-INNAGIQYRKPMVELELENWQKVIDT 116 (255)
T ss_dssp HTTCCCCEE-EECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHCCCCcEE-EECCCCCCCCChhhCCHHHHHHHHHH
Confidence 34444 4443 333332 3577888887765
No 243
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=72.34 E-value=20 Score=31.97 Aligned_cols=97 Identities=7% Similarity=0.047 Sum_probs=57.3
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------ 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-.......+..|.++..+..+- -|.+.+++.++.
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 84 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDL-----TNEVSVRALIDFTIDTFG 84 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCC-----CCHHHHHHHHHHHHHHcC
Confidence 445677777766555566777888898887776655566666666666666665532 256666665542
Q ss_pred CCcEEEEcCCCC-C-cc--CCCCHHHHHHHHH
Q 014172 228 KSRLLILCSPSN-P-TG--SVYPKNLLDEIAR 255 (429)
Q Consensus 228 ~~~~i~l~~p~N-P-tG--~~~~~~~l~~I~~ 255 (429)
+...++-+.... + .+ ..++.+++++..+
T Consensus 85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 116 (271)
T 3tzq_B 85 RLDIVDNNAAHSDPADMLVTQMTVDVWDDTFT 116 (271)
T ss_dssp CCCEEEECCCCCCTTCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCCccccCCHHHHHHHHH
Confidence 455555433322 2 11 1346677766554
No 244
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=72.10 E-value=29 Score=30.48 Aligned_cols=97 Identities=10% Similarity=0.085 Sum_probs=54.9
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------ 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-.......+..+.++..+..+. -|.+.+++.++.
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 85 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADV-----TSEKDVQTALALAKGKFG 85 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCC-----CCHHHHHHHHHHHHHHCC
Confidence 345677776665555566777788898877665443445555555566666666543 256666665541
Q ss_pred CCcEEEEcCCCCCccC--------CCCHHHHHHHHH
Q 014172 228 KSRLLILCSPSNPTGS--------VYPKNLLDEIAR 255 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~--------~~~~~~l~~I~~ 255 (429)
+...++-+......+. ..+.+++++..+
T Consensus 86 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (265)
T 2o23_A 86 RVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLD 121 (265)
T ss_dssp CCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHH
T ss_pred CCCEEEECCccCCCCccccccccCCCCHHHHHHHHH
Confidence 4556554433222221 246666666554
No 245
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=70.67 E-value=16 Score=32.80 Aligned_cols=94 Identities=13% Similarity=0.105 Sum_probs=54.3
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------CC
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KS 229 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~~ 229 (429)
..++||.|+...-..+...|.+.|..|++..-.-..........+.++..+..+- -|.+.+++.+.. +.
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~~~~~~~~~~~~~g~i 80 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDV-----TDGERIDVVAADVLARYGRV 80 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCT-----TCHHHHHHHHHHHHHHHSCC
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeC-----CCHHHHHHHHHHHHHhCCCC
Confidence 4567776665555556777888898888766554555666666666666666542 266666665542 45
Q ss_pred cEEEEcCCCCCccC--CCCHHHHHHHH
Q 014172 230 RLLILCSPSNPTGS--VYPKNLLDEIA 254 (429)
Q Consensus 230 ~~i~l~~p~NPtG~--~~~~~~l~~I~ 254 (429)
..++-+....+.+. ..+.++++++.
T Consensus 81 d~lv~~Ag~~~~~~~~~~~~~~~~~~~ 107 (281)
T 3m1a_A 81 DVLVNNAGRTQVGAFEETTERELRDLF 107 (281)
T ss_dssp SEEEECCCCEEECCTTTCCHHHHHHHH
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHH
Confidence 66554433332222 34556555443
No 246
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=70.16 E-value=15 Score=32.48 Aligned_cols=97 Identities=8% Similarity=0.020 Sum_probs=55.5
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------ 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-..........+.++..+..+- -|.+.+++.++.
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 81 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDV-----TRQDSIDAAIAATVEHAG 81 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeC-----CCHHHHHHHHHHHHHHcC
Confidence 345677877766655666777888898887765433334444555566666666542 256666665542
Q ss_pred CCcEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 228 KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
+...++-+....+.+ ...+.+++++..+
T Consensus 82 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (259)
T 4e6p_A 82 GLDILVNNAALFDLAPIVEITRESYEKLFA 111 (259)
T ss_dssp SCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 455555443332222 2346667765544
No 247
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=70.07 E-value=12 Score=33.43 Aligned_cols=98 Identities=12% Similarity=0.054 Sum_probs=55.2
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------ 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-.......+..|.++..+..+- -|.+.+++.++.
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 100 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANL-----SDRKSIKQLAEVAEREME 100 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCT-----TSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeec-----CCHHHHHHHHHHHHHHcC
Confidence 445677777666555566777888898887765433334445556677777776643 266666665542
Q ss_pred CCcEEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 228 KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
+...++-+......+ ...+.++++++.++
T Consensus 101 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 131 (266)
T 3grp_A 101 GIDILVNNAGITRDGLFVRMQDQDWDDVLAV 131 (266)
T ss_dssp SCCEEEECCCCC-----CCCHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 455555433322222 22455566655443
No 248
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=70.06 E-value=11 Score=34.04 Aligned_cols=98 Identities=10% Similarity=-0.009 Sum_probs=54.6
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------ 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-.......+..+.++..+..+- -|.+.+++.++.
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 102 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDV-----SDEQQIIAMVDACVAAFG 102 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecC-----CCHHHHHHHHHHHHHHcC
Confidence 334566766665544556677788898887765433333444455566666665532 256666655542
Q ss_pred CCcEEEEcCCCCCccC--CCCHHHHHHHHHH
Q 014172 228 KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~--~~~~~~l~~I~~~ 256 (429)
+...++-+....+.+. ..+.++++++.++
T Consensus 103 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 133 (277)
T 3gvc_A 103 GVDKLVANAGVVHLASLIDTTVEDFDRVIAI 133 (277)
T ss_dssp SCCEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 4555554433332222 3567777766543
No 249
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=69.59 E-value=19 Score=32.09 Aligned_cols=96 Identities=13% Similarity=0.055 Sum_probs=53.1
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------ 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-......+...++..+..++. |.+.+++.++.
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~-------~~~~v~~~~~~~~~~~g 98 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFS-------CETGIMAFIDLLKTQTS 98 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTT-------SHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCC-------CHHHHHHHHHHHHHhcC
Confidence 44567888776665556677788888777766544334445555567666555542 56666655532
Q ss_pred CCcEEEEcCCCC-CccCCCCHHHHHHHHHH
Q 014172 228 KSRLLILCSPSN-PTGSVYPKNLLDEIARI 256 (429)
Q Consensus 228 ~~~~i~l~~p~N-PtG~~~~~~~l~~I~~~ 256 (429)
+...++-+.... +.....+.++++++.++
T Consensus 99 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~v 128 (260)
T 3gem_A 99 SLRAVVHNASEWLAETPGEEADNFTRMFSV 128 (260)
T ss_dssp CCSEEEECCCCCCCCCTTCHHHHHHHHHHH
T ss_pred CCCEEEECCCccCCCCCCCCHHHHHHHHHH
Confidence 455555433322 22233455556555543
No 250
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=69.14 E-value=29 Score=30.61 Aligned_cols=98 Identities=8% Similarity=-0.037 Sum_probs=55.1
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc---
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--- 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-..... .++..|.++..+..+- -|.+.+++.++.
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 80 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDA-----RNEDEVTAFLNAADA 80 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcC-----CCHHHHHHHHHHHHh
Confidence 34567777776665566677788889887776544333333 3334477887777653 256666665532
Q ss_pred --CCcEEEEcCCCCCccC--CCCHHHHHHHHHH
Q 014172 228 --KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 228 --~~~~i~l~~p~NPtG~--~~~~~~l~~I~~~ 256 (429)
+...++-+......+. ..+.+++++..++
T Consensus 81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 113 (252)
T 3h7a_A 81 HAPLEVTIFNVGANVNFPILETTDRVFRKVWEM 113 (252)
T ss_dssp HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred hCCceEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 3344443333222222 3566666665543
No 251
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=68.65 E-value=13 Score=33.50 Aligned_cols=98 Identities=12% Similarity=0.168 Sum_probs=56.9
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCC---------Ch------HHHHHHcCCEEEEecCCCCCCCCCCH
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV---------SY------PEMARIADATPVILPTRISENFLLDP 218 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~---------~~------~~~~~~~g~~~~~v~~~~~~~~~~d~ 218 (429)
....++||.|+...-..+...|.+.|..|++..-... .. ...++..|.++..+..+- -|.
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~ 83 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDV-----RDR 83 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCT-----TCH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccC-----CCH
Confidence 3456777777665556667778888988776532210 01 122334577777776643 266
Q ss_pred HHHHhhccc------CCcEEEEcCCCCCccCCCCHHHHHHHHHH
Q 014172 219 KVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARI 256 (429)
Q Consensus 219 e~l~~~l~~------~~~~i~l~~p~NPtG~~~~~~~l~~I~~~ 256 (429)
+.+++.+.. +...++-+....+.+...+.+++++..++
T Consensus 84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (287)
T 3pxx_A 84 AAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDV 127 (287)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhh
Confidence 666665542 45555544444444444677778777665
No 252
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=68.47 E-value=11 Score=37.64 Aligned_cols=113 Identities=16% Similarity=0.187 Sum_probs=61.7
Q ss_pred CCCCCCCcEEEecChHHHHHHHHHHh---cCCC--------------CEEEEcCCCCCC-------------------hH
Q 014172 150 GLSYTPDQILVSNGAKQSILQAVLAV---CSPG--------------DEVIIPAPFWVS-------------------YP 193 (429)
Q Consensus 150 g~~~~~~~i~~t~G~~~al~~~l~~l---~~~g--------------d~Vlv~~p~y~~-------------------~~ 193 (429)
.+.++++.|.++.++..+++..++.| +..+ ...+...|.|.- +.
T Consensus 101 ~L~v~~~~i~I~a~~~~G~~~g~qTL~Ql~~~~~~~~~~~~~~~~lp~~~I~D~Prf~~RG~mLD~aR~f~~~~~ik~~i 180 (512)
T 1jak_A 101 RLDSGPAGVTITARKAAGLFHGVQTLRQLLPPAVEKDSAQPGPWLVAGGTIEDTPRYAWRSAMLDVSRHFFGVDEVKRYI 180 (512)
T ss_dssp EEEEETTEEEEEESSHHHHHHHHHHHHHHSCGGGGCSSCCCCCCEECCEEEEECCSCSEEEEEEECSSSCCCHHHHHHHH
T ss_pred EEEEeCCEEEEEEcCHHHHHHHHHHHHHHhhhhhcccccccCcccccceEEeecCCCCccceeeccCCCCCCHHHHHHHH
Confidence 33456678888888777776666665 2221 123455565531 12
Q ss_pred HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEE
Q 014172 194 EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 267 (429)
Q Consensus 194 ~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~ 267 (429)
..+...+.++....+..+.+|.+..+...++...... .......|-.++++++++|++.|+++ +|-||-
T Consensus 181 d~ma~~KlN~lh~HltDdq~wriei~~~P~Lt~~ga~----~~~~~~~~g~YT~~di~eiv~yA~~r-gI~VIP 249 (512)
T 1jak_A 181 DRVARYKYNKLHLHLSDDQGWRIAIDSWPRLATYGGS----TEVGGGPGGYYTKAEYKEIVRYAASR-HLEVVP 249 (512)
T ss_dssp HHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTS----CCTTSSCCCCBCHHHHHHHHHHHHHT-TCEEEE
T ss_pred HHHHHcCCcEEEEEeccCCCceehhhhhHHHHhhcCc----cccCCCCCCCCCHHHHHHHHHHHHHc-CCEEEE
Confidence 2333445555555544333444443332221110000 00112236789999999999999999 999984
No 253
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=68.17 E-value=46 Score=29.84 Aligned_cols=99 Identities=15% Similarity=0.155 Sum_probs=58.0
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCC-------C---hHHHHHHcCCEEEEecCCCCCCCCCCHHHHH
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV-------S---YPEMARIADATPVILPTRISENFLLDPKVLE 222 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~-------~---~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~ 222 (429)
+....++||.|+...-..+.+.|.+.|..|++..-.-. . ....++..|.++..+..+-. |.+.++
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~ 81 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIR-----DGDAVA 81 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTT-----SHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHH
Confidence 34456777777666556667778888988776543322 1 12334455788888876532 566666
Q ss_pred hhccc------CCcEEEEcCCCCCccC--CCCHHHHHHHHHH
Q 014172 223 SKLTE------KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 223 ~~l~~------~~~~i~l~~p~NPtG~--~~~~~~l~~I~~~ 256 (429)
+.++. +...++-+......+. ..+.++++++.++
T Consensus 82 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~v 123 (285)
T 3sc4_A 82 AAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGI 123 (285)
T ss_dssp HHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 65542 5566554443333332 3567777776654
No 254
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=67.81 E-value=8.1 Score=35.06 Aligned_cols=75 Identities=11% Similarity=0.048 Sum_probs=46.2
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc--CCcE
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE--KSRL 231 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--~~~~ 231 (429)
....++||.|+...-..+...|.+.|..|++..-.-.......+..+.++..+..+- -|.+.+++.+.. +...
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl-----~d~~~v~~~~~~~~~iD~ 89 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDL-----QDLSSVRRFADGVSGADV 89 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCT-----TCHHHHHHHHHTCCCEEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCC-----CCHHHHHHHHHhcCCCCE
Confidence 445677777766555666777888898887765433333444455566777776643 267777776653 3444
Q ss_pred EE
Q 014172 232 LI 233 (429)
Q Consensus 232 i~ 233 (429)
++
T Consensus 90 lv 91 (291)
T 3rd5_A 90 LI 91 (291)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 255
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=67.18 E-value=10 Score=37.87 Aligned_cols=108 Identities=14% Similarity=0.142 Sum_probs=60.8
Q ss_pred CCCCCCcEEEecChHHHHHHHHHHhc---CC---CC-----EEEEcCCCCCC-------------------hHHHHHHcC
Q 014172 151 LSYTPDQILVSNGAKQSILQAVLAVC---SP---GD-----EVIIPAPFWVS-------------------YPEMARIAD 200 (429)
Q Consensus 151 ~~~~~~~i~~t~G~~~al~~~l~~l~---~~---gd-----~Vlv~~p~y~~-------------------~~~~~~~~g 200 (429)
+.++++.|.++..+..+++..++.|. .. |. ..+...|.|.- +.+.+...+
T Consensus 96 L~v~~~~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~mA~~K 175 (507)
T 2gjx_A 96 LTINDDQCLLLSETVWGALRGLETFSQLVWKSAEGTFFINKTEIEDFPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNK 175 (507)
T ss_dssp EEESSSCEEEEESSHHHHHHHHHHHHHHEEECTTCCEEEECEEEEECCSCSEEEEEEETTTSCCCHHHHHHHHHHHHHTT
T ss_pred EEEeCCeEEEEECCHHHHHHHHHHHHHHhhhccCCceeeccEEEeecCCcceeeeeeccCCCCCCHHHHHHHHHHHHHhC
Confidence 33566778898888777776766652 11 21 23344565431 123333455
Q ss_pred CEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEE
Q 014172 201 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 267 (429)
Q Consensus 201 ~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~ 267 (429)
.++....+..+.+|.+......++-.. ....|.|..++++++++|++.|+++ ++-||-
T Consensus 176 lN~lh~HltDdq~wr~ei~~~P~Lt~~--------Ga~~~~~~~YT~~di~eiv~yA~~r-gI~VIP 233 (507)
T 2gjx_A 176 LNVFHWHLVDDPSFPYESFTFPELMRK--------GSYNPVTHIYTAQDVKEVIEYARLR-GIRVLA 233 (507)
T ss_dssp CCEEEEECCCSSCCCBCCSSCTHHHHH--------HSSCTTTSCBCHHHHHHHHHHHHHT-TCEEEE
T ss_pred CceEEEEEecccCeeeeccccchhhhc--------cccCCCCCCcCHHHHHHHHHHHHHc-CCEEEE
Confidence 555555544333444332211111000 0012446789999999999999999 999884
No 256
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=66.82 E-value=11 Score=33.78 Aligned_cols=98 Identities=12% Similarity=0.042 Sum_probs=54.4
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-----C
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-----K 228 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-----~ 228 (429)
....++||.|+...-..+...|.+.|..|++..-.-.......+..+.++..+..+- -|.+.+++.++. +
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~~~ 103 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNV-----TSEDSVLAAIEAANQLGR 103 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHHHHTTSSE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCC-----CCHHHHHHHHHHHHHhCC
Confidence 334677777766655666777888898887765433333445555566676666543 256666555431 2
Q ss_pred CcEEEEcCC-CCCcc-------CCCCHHHHHHHHHH
Q 014172 229 SRLLILCSP-SNPTG-------SVYPKNLLDEIARI 256 (429)
Q Consensus 229 ~~~i~l~~p-~NPtG-------~~~~~~~l~~I~~~ 256 (429)
...++.+.. ..+.+ ...+.+++++..++
T Consensus 104 id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (281)
T 3ppi_A 104 LRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDL 139 (281)
T ss_dssp EEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHH
T ss_pred CCeEEEccCcccccccccccccccCCHHHHHHHHHH
Confidence 334443412 22222 24566666666554
No 257
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=66.06 E-value=15 Score=32.54 Aligned_cols=98 Identities=13% Similarity=0.072 Sum_probs=55.5
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------ 227 (429)
....+++|.|+...-..+.+.|.+.|..|++..-.-.......+..|.++..+..+- -|.+.+++.+..
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 81 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDI-----ADLNEIAVLGAAAGQTLG 81 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccC-----CCHHHHHHHHHHHHHHhC
Confidence 445678887776655666777888898887765433333444445566666666543 256666655432
Q ss_pred CCcEEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 228 KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
+...++.+....+.+ ...+.+++++..++
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (255)
T 4eso_A 82 AIDLLHINAGVSELEPFDQVSEASYDRQFAV 112 (255)
T ss_dssp SEEEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 344443332222222 13466777776654
No 258
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=65.61 E-value=16 Score=32.50 Aligned_cols=99 Identities=12% Similarity=0.115 Sum_probs=58.4
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCC-CChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcE
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFW-VSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRL 231 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y-~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~ 231 (429)
++-..++||.|++.--..+...|.+.|..|++.+-.- ......++..|.++..+..+-. |.+.+++.++...--
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~-----d~~~v~~~~~~g~iD 81 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFA-----DPLAAKDSFTDAGFD 81 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTT-----STTTTTTSSTTTCCC
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCC-----CHHHHHHHHHhCCCC
Confidence 4445566666666555556677888998877665321 1234566677888888776532 344555555432223
Q ss_pred EEEcCC-CCCcc--CCCCHHHHHHHHHH
Q 014172 232 LILCSP-SNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 232 i~l~~p-~NPtG--~~~~~~~l~~I~~~ 256 (429)
++++|. -.+.+ .-++.++|+++.++
T Consensus 82 iLVNNAGi~~~~~~~~~~~~~w~~~~~v 109 (247)
T 4hp8_A 82 ILVNNAGIIRRADSVEFSELDWDEVMDV 109 (247)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccccHHHHHHHHHH
Confidence 445554 22222 34678889888876
No 259
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=65.45 E-value=34 Score=29.97 Aligned_cols=97 Identities=10% Similarity=0.030 Sum_probs=52.5
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCC-CChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc------c
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFW-VSYPEMARIADATPVILPTRISENFLLDPKVLESKLT------E 227 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y-~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~------~ 227 (429)
...+++|.|+...-..+...|.+.|..|++..-.- ......++..|.++..+..+- -|.+.+++.++ .
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 81 (249)
T 2ew8_A 7 DKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDV-----SQPGDVEAFGKQVISTFG 81 (249)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeec-----CCHHHHHHHHHHHHHHcC
Confidence 34577777666555566777788898877654322 112223344566666666543 25666666543 2
Q ss_pred CCcEEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 228 KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
+...++-+....+.+ ...+.++++++.++
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (249)
T 2ew8_A 82 RCDILVNNAGIYPLIPFDELTFEQWKKTFEI 112 (249)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 455555433322222 12466666665543
No 260
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=65.34 E-value=24 Score=31.04 Aligned_cols=98 Identities=10% Similarity=0.061 Sum_probs=55.5
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-----
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE----- 227 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~----- 227 (429)
+....+++|.|+...-..+.+.|.+.|..|++..-.-.......+..+.++..+..+- -|.+.+++.++.
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 81 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADI-----SKEADVDAAVEAALSKF 81 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCT-----TSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecC-----CCHHHHHHHHHHHHHhc
Confidence 3445677777766555566777888898877765443334445555666677776543 256666655532
Q ss_pred -CCcEEEEcCCC-CCcc--CCCCHHHHHHHHH
Q 014172 228 -KSRLLILCSPS-NPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 228 -~~~~i~l~~p~-NPtG--~~~~~~~l~~I~~ 255 (429)
+...++.+... .+.+ ...+.+++++..+
T Consensus 82 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 113 (261)
T 3n74_A 82 GKVDILVNNAGIGHKPQNAELVEPEEFDRIVG 113 (261)
T ss_dssp SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHH
T ss_pred CCCCEEEECCccCCCCCCcccCCHHHHHHHHH
Confidence 45555543332 2122 2246666666544
No 261
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=65.26 E-value=39 Score=30.63 Aligned_cols=98 Identities=12% Similarity=0.112 Sum_probs=54.3
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHH---cC-CEEEEecCCCCCCCCCCHHHHHhhccc--
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI---AD-ATPVILPTRISENFLLDPKVLESKLTE-- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~---~g-~~~~~v~~~~~~~~~~d~e~l~~~l~~-- 227 (429)
....++||.|+...-..+.+.|.+.|..|++..-.-......... .+ .++..+..+- -|.+.+++.+..
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 114 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDV-----SDPGSCADAARTVV 114 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeC-----CCHHHHHHHHHHHH
Confidence 344567776665555556777888898887765443344433332 23 4566665542 256666655432
Q ss_pred ----CCcEEEEcCCCCCccC--CCCHHHHHHHHHH
Q 014172 228 ----KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 228 ----~~~~i~l~~p~NPtG~--~~~~~~l~~I~~~ 256 (429)
+...++-+....+.+. .++.++++++.++
T Consensus 115 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 149 (293)
T 3rih_A 115 DAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDV 149 (293)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 4555554333333332 4477777776654
No 262
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=64.85 E-value=59 Score=29.66 Aligned_cols=78 Identities=12% Similarity=0.138 Sum_probs=50.5
Q ss_pred cCCCCCChHHHHHHcC-CEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCe
Q 014172 185 PAPFWVSYPEMARIAD-ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL 263 (429)
Q Consensus 185 ~~p~y~~~~~~~~~~g-~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i 263 (429)
.-|.|.+..+..+..+ ..+..+-+.++ .-++.++++++.+.+.+++.+. | ++.++.++|.+.|+++ ++
T Consensus 55 G~~vy~sl~el~~~~~~~DvaIi~vp~~----~~~~~v~ea~~~Gi~~vVi~t~----G--~~~~~~~~l~~~A~~~-gi 123 (297)
T 2yv2_A 55 GVPVYDSVKEALAEHPEINTSIVFVPAP----FAPDAVYEAVDAGIRLVVVITE----G--IPVHDTMRFVNYARQK-GA 123 (297)
T ss_dssp TEEEESSHHHHHHHCTTCCEEEECCCGG----GHHHHHHHHHHTTCSEEEECCC----C--CCHHHHHHHHHHHHHH-TC
T ss_pred CEeeeCCHHHHhhcCCCCCEEEEecCHH----HHHHHHHHHHHCCCCEEEEECC----C--CCHHHHHHHHHHHHHc-CC
Confidence 3455666666665323 55544443332 3577888888888886665322 3 3567789999999999 89
Q ss_pred EEEEccCCcc
Q 014172 264 LVLSDEIYEH 273 (429)
Q Consensus 264 ~vi~Deay~~ 273 (429)
.++-..+.+.
T Consensus 124 ~viGPNc~Gi 133 (297)
T 2yv2_A 124 TIIGPNCPGA 133 (297)
T ss_dssp EEECSSSCEE
T ss_pred EEEcCCCCee
Confidence 8886665543
No 263
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=64.15 E-value=26 Score=31.30 Aligned_cols=99 Identities=6% Similarity=-0.020 Sum_probs=56.0
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc--
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE-- 227 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-- 227 (429)
+....++||.|+...-..+...|.+.|..|++..-.-..... .++..|.++..+..+- -|.+.+++.++.
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 98 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDV-----TSESEIIEAFARLD 98 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCT-----TCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHHHHH
Confidence 344567777766655556677788899888876543222222 2234577777776643 266676666542
Q ss_pred ----CCcEEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 228 ----KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 ----~~~~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
+...++-+....+.+ ...+.++++++.++
T Consensus 99 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 133 (271)
T 4ibo_A 99 EQGIDVDILVNNAGIQFRKPMIELETADWQRVIDT 133 (271)
T ss_dssp HHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHH
Confidence 455555433322222 23466777766554
No 264
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=63.91 E-value=66 Score=29.94 Aligned_cols=97 Identities=10% Similarity=0.103 Sum_probs=54.9
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCC----------hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHh
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS----------YPEMARIADATPVILPTRISENFLLDPKVLES 223 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~----------~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~ 223 (429)
....++||.|+...-..+...|.+.|..|++..-.-.. ....++..|.++..+..+- -|.+.+++
T Consensus 44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv-----~d~~~v~~ 118 (346)
T 3kvo_A 44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDV-----RDEQQISA 118 (346)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCT-----TCHHHHHH
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccC-----CCHHHHHH
Confidence 34456777666555555677788889887765432221 2334455688888877643 26676666
Q ss_pred hccc------CCcEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 224 KLTE------KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 224 ~l~~------~~~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
+++. +...++-+......+ ...+.++++++.+
T Consensus 119 ~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~ 158 (346)
T 3kvo_A 119 AVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMN 158 (346)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 6542 455555433322222 2356666766544
No 265
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=63.87 E-value=27 Score=30.51 Aligned_cols=95 Identities=15% Similarity=0.151 Sum_probs=49.9
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------C
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------K 228 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~ 228 (429)
...+++|.|+...-..+...|.+.|..|++..-.-.......+..|+..+..++ -|.+.+++.++. +
T Consensus 5 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~-------~~~~~~~~~~~~~~~~~g~ 77 (245)
T 1uls_A 5 DKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDV-------ADPASVERGFAEALAHLGR 77 (245)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCT-------TCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecC-------CCHHHHHHHHHHHHHHcCC
Confidence 345777766655555566777788988776543211222333334655444443 256666665542 4
Q ss_pred CcEEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 229 SRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 229 ~~~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
...++-+....+.+ ...+.++++++.++
T Consensus 78 id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~ 107 (245)
T 1uls_A 78 LDGVVHYAGITRDNFHWKMPLEDWELVLRV 107 (245)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 55555333222222 23466677766554
No 266
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=63.78 E-value=35 Score=30.50 Aligned_cols=98 Identities=12% Similarity=0.145 Sum_probs=54.3
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHH----HHcCCEEEEecCCCCCCCCCCHHHHHhhccc--
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTRISENFLLDPKVLESKLTE-- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-- 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-....... ...|.++..+..+- -|.+.+++.++.
T Consensus 26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 100 (277)
T 4fc7_A 26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDV-----RAPPAVMAAVDQAL 100 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 3346777777665556667778889988777654322222222 23467777776643 256666665542
Q ss_pred ----CCcEEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 228 ----KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 ----~~~~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
+...++-+......+ ..++.++++++.++
T Consensus 101 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 135 (277)
T 4fc7_A 101 KEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDI 135 (277)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHH
Confidence 455555433322222 13466777766554
No 267
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=63.77 E-value=33 Score=31.04 Aligned_cols=99 Identities=5% Similarity=0.109 Sum_probs=55.8
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCC-------C--CC------hHHHHHHcCCEEEEecCCCCCCCCCC
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF-------W--VS------YPEMARIADATPVILPTRISENFLLD 217 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~-------y--~~------~~~~~~~~g~~~~~v~~~~~~~~~~d 217 (429)
+....++||.|+...-..+...|.+.|..|++.+-. . .. ....++..|.++..+..+- -|
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~ 100 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDV-----RD 100 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT-----TC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCC-----CC
Confidence 344567777776655556677788889887765322 0 00 1122344577777777653 26
Q ss_pred HHHHHhhccc------CCcEEEEcCCCCCccC---CCCHHHHHHHHHH
Q 014172 218 PKVLESKLTE------KSRLLILCSPSNPTGS---VYPKNLLDEIARI 256 (429)
Q Consensus 218 ~e~l~~~l~~------~~~~i~l~~p~NPtG~---~~~~~~l~~I~~~ 256 (429)
.+.+++.++. +...++.+......+. .++.++++++.++
T Consensus 101 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~v 148 (299)
T 3t7c_A 101 FDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDV 148 (299)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHH
Confidence 6666666542 4555554433222222 3477777776654
No 268
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=63.33 E-value=21 Score=31.43 Aligned_cols=98 Identities=11% Similarity=0.067 Sum_probs=53.8
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------ 227 (429)
....+++|.|+...-..+...|.+.|..|++..-.-.......+..+.+...+..+- -|.+.+++.++.
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 82 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNV-----TNPESIEAVLKAITDEFG 82 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCT-----TCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeC-----CCHHHHHHHHHHHHHHcC
Confidence 345677777766555556777888898887765432233334444444445555432 266666665542
Q ss_pred CCcEEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 228 KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
+...++-+....+.+ ...+.++++++.++
T Consensus 83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 113 (248)
T 3op4_A 83 GVDILVNNAGITRDNLLMRMKEEEWSDIMET 113 (248)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 455555433332222 23466777766553
No 269
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=63.18 E-value=18 Score=31.62 Aligned_cols=96 Identities=9% Similarity=0.199 Sum_probs=51.7
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------CC
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KS 229 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~~ 229 (429)
..+++|.|+...-..+...|.+.|..|++..-.-.......+..+.++..+..+- -|.+.+++.++. +.
T Consensus 4 k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~i 78 (235)
T 3l6e_A 4 GHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADL-----AHHEDVDVAFAAAVEWGGLP 78 (235)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCT-----TSHHHHHHHHHHHHHHHCSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCC-----CCHHHHHHHHHHHHHhcCCC
Confidence 3567777666555556677788898887765433333333333344455555532 256666655532 45
Q ss_pred cEEEEcCCCCCccC--CCCHHHHHHHHHH
Q 014172 230 RLLILCSPSNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 230 ~~i~l~~p~NPtG~--~~~~~~l~~I~~~ 256 (429)
..++-+....+.+. ..+.++++++.++
T Consensus 79 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 107 (235)
T 3l6e_A 79 ELVLHCAGTGEFGPVGVYTAEQIRRVMES 107 (235)
T ss_dssp SEEEEECCCC------CCCHHHHHHHHHH
T ss_pred cEEEECCCCCCCCChHhCCHHHHHHHHHH
Confidence 55554433332222 3477777777664
No 270
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=63.00 E-value=24 Score=31.48 Aligned_cols=97 Identities=6% Similarity=0.001 Sum_probs=58.1
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCCh---HHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc---
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSY---PEMARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--- 227 (429)
....+++|.|++..-..+...|.+.|..|++.+-.-... ...++..|.++..+..|- -|.+++++.++.
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv-----t~~~~v~~~~~~~~~ 80 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADV-----SKKKDVEEFVRRTFE 80 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHHH
Confidence 334567776666555556667788998888765432222 223445688888887653 266777666542
Q ss_pred ---CCcEEEEcCC--CCCcc--CCCCHHHHHHHHHH
Q 014172 228 ---KSRLLILCSP--SNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 ---~~~~i~l~~p--~NPtG--~~~~~~~l~~I~~~ 256 (429)
+... +++|. ..+.+ .-++.|+|+++.++
T Consensus 81 ~~G~iDi-LVNNAGi~~~~~~~~~~~~e~~~~~~~v 115 (254)
T 4fn4_A 81 TYSRIDV-LCNNAGIMDGVTPVAEVSDELWERVLAV 115 (254)
T ss_dssp HHSCCCE-EEECCCCCCTTCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCE-EEECCcccCCCCChhhCCHHHHHHHHHH
Confidence 3444 45544 23333 34688889888775
No 271
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=62.39 E-value=32 Score=30.19 Aligned_cols=97 Identities=12% Similarity=0.063 Sum_probs=51.4
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------C
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------K 228 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~ 228 (429)
...+++|.|+...-..+...|.+.|..|++..-.-.......+..|.++..+..+- -|.+.+++.++. +
T Consensus 6 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~ 80 (253)
T 1hxh_A 6 GKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDV-----SSEADWTLVMAAVQRRLGT 80 (253)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCT-----TCHHHHHHHHHHHHHHHCS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccC-----CCHHHHHHHHHHHHHHcCC
Confidence 34567776655544556677778898877765332222233333465666666542 256666665532 3
Q ss_pred CcEEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 229 SRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 229 ~~~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
...++-+....+.+ ...+.+++++..++
T Consensus 81 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 110 (253)
T 1hxh_A 81 LNVLVNNAGILLPGDMETGRLEDFSRLLKI 110 (253)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHh
Confidence 45555433322222 23466666655543
No 272
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=62.30 E-value=42 Score=28.87 Aligned_cols=95 Identities=6% Similarity=0.011 Sum_probs=54.9
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHH----HHcCCEEEEecCCCCCCCCCCHHHHHhhccc-----
Q 014172 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTRISENFLLDPKVLESKLTE----- 227 (429)
Q Consensus 157 ~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~----- 227 (429)
.+++|.|+...-..+.+.|.+.|..|++..-.-....... ...|.++..+..+- -|.+.+++.++.
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV-----SKAESVEEFSKKVLERF 78 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHCC-HHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEecc-----CCHHHHHHHHHHHHHhc
Confidence 4677776665555567778888988777654322222222 24577777776643 267788777653
Q ss_pred -CCcEEEEcCCCCCccC--CCCHHHHHHHHHH
Q 014172 228 -KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 228 -~~~~i~l~~p~NPtG~--~~~~~~l~~I~~~ 256 (429)
+...++.+....+.+. ..+.+++++..++
T Consensus 79 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 110 (235)
T 3l77_A 79 GDVDVVVANAGLGYFKRLEELSEEEFHEMIEV 110 (235)
T ss_dssp SSCSEEEECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred CCCCEEEECCccccccCcccCCHHHHHHHHHH
Confidence 4566554443333332 3466777766554
No 273
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=62.22 E-value=57 Score=28.73 Aligned_cols=99 Identities=17% Similarity=0.058 Sum_probs=62.4
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCEEEEc---CC-----------CCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHH
Q 014172 157 QILVSNGAKQSILQAVLAVCSPGDEVIIP---AP-----------FWVSYPEMARIADATPVILPTRISENFLLDPKVLE 222 (429)
Q Consensus 157 ~i~~t~G~~~al~~~l~~l~~~gd~Vlv~---~p-----------~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~ 222 (429)
-++..+||..+..++..+. +.|-.|..- .+ ........++..|+....+++..+.+ --.+++.
T Consensus 7 vvvl~SGGkDSs~al~~l~-~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~~--~e~e~l~ 83 (237)
T 3rjz_A 7 VAVLYSGGKDSNYALYWAI-KNRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEKE--KEVEDLK 83 (237)
T ss_dssp EEEECCSSHHHHHHHHHHH-HTTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC--------CHHHHH
T ss_pred EEEEecCcHHHHHHHHHHH-HcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCch--HHHHHHH
Confidence 4677788888877665544 456544321 11 11223467888999988888753221 2367777
Q ss_pred hhccc-CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE
Q 014172 223 SKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (429)
Q Consensus 223 ~~l~~-~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi 266 (429)
+++.. ...+++ +|.+.+..+...+-+.|.+. |+..+
T Consensus 84 ~~l~~~~i~~vv-------~Gdi~s~yqr~r~e~vc~~~-gl~~~ 120 (237)
T 3rjz_A 84 RVLSGLKIQGIV-------AGALASKYQRKRIEKVAKEL-GLEVY 120 (237)
T ss_dssp HHHTTSCCSEEE-------CC---CCSHHHHHHHHHHHT-TCEEE
T ss_pred HHHHhcCCcEEE-------ECCcchHHHHHHHHHHHHHc-CCEEE
Confidence 77654 556666 79999999999999999999 88877
No 274
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=61.67 E-value=29 Score=30.63 Aligned_cols=98 Identities=13% Similarity=0.077 Sum_probs=54.9
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChH---HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc--
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTE-- 227 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-- 227 (429)
+....+++|.|+...-..+.+.|.+.|..|++..-.-.... ..++..|.++..+..+- -|.+.+++.++.
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 84 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNV-----TDEQHREAVIKAAL 84 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHH
Confidence 34456777776665555667777888988877654322222 22334577777776643 266666665542
Q ss_pred ----CCcEEEEcCCCC-CccCCCCHHHHHHHHH
Q 014172 228 ----KSRLLILCSPSN-PTGSVYPKNLLDEIAR 255 (429)
Q Consensus 228 ----~~~~i~l~~p~N-PtG~~~~~~~l~~I~~ 255 (429)
+...++-+.... +.....+.+++++..+
T Consensus 85 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 117 (256)
T 3gaf_A 85 DQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFK 117 (256)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 455555433322 2222567777776654
No 275
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=61.59 E-value=39 Score=30.83 Aligned_cols=77 Identities=9% Similarity=0.128 Sum_probs=50.0
Q ss_pred CCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEE
Q 014172 186 APFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLV 265 (429)
Q Consensus 186 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~v 265 (429)
-|.|.+..+..+.....++.+-+.++ .-++.++++++.+.+.+++.+. | ++.++.++|.+.|+++ ++.+
T Consensus 56 ~~vy~sl~el~~~~~~Dv~ii~vp~~----~~~~~v~ea~~~Gi~~vVi~t~----G--~~~~~~~~l~~~A~~~-gi~v 124 (294)
T 2yv1_A 56 VPVFDTVKEAVKETDANASVIFVPAP----FAKDAVFEAIDAGIELIVVITE----H--IPVHDTMEFVNYAEDV-GVKI 124 (294)
T ss_dssp EEEESSHHHHHHHHCCCEEEECCCHH----HHHHHHHHHHHTTCSEEEECCS----C--CCHHHHHHHHHHHHHH-TCEE
T ss_pred EeeeCCHHHHhhcCCCCEEEEccCHH----HHHHHHHHHHHCCCCEEEEECC----C--CCHHHHHHHHHHHHHc-CCEE
Confidence 34566666666633555555444332 2567777777778886664322 3 2567789999999999 8988
Q ss_pred EEccCCcc
Q 014172 266 LSDEIYEH 273 (429)
Q Consensus 266 i~Deay~~ 273 (429)
+-..+.+.
T Consensus 125 iGPNc~Gi 132 (294)
T 2yv1_A 125 IGPNTPGI 132 (294)
T ss_dssp ECSSCCEE
T ss_pred EcCCCcee
Confidence 87765543
No 276
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=61.59 E-value=33 Score=29.86 Aligned_cols=98 Identities=13% Similarity=0.073 Sum_probs=54.1
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChH---HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc---
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--- 227 (429)
....++||.|+...-..+...|.+.|.+|++..-.-.... ..++..|.++..+..+. -|.+.+++.+..
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 78 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNI-----SDIESIQNFFAEIKA 78 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecC-----CCHHHHHHHHHHHHH
Confidence 3456777776665555567778888988776654322222 22334467777776643 266666665532
Q ss_pred ---CCcEEEEcCCCCCccC--CCCHHHHHHHHHH
Q 014172 228 ---KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 228 ---~~~~i~l~~p~NPtG~--~~~~~~l~~I~~~ 256 (429)
+...++.+....+.+. ..+.+++++..++
T Consensus 79 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 112 (247)
T 3lyl_A 79 ENLAIDILVNNAGITRDNLMMRMSEDEWQSVINT 112 (247)
T ss_dssp TTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHH
Confidence 4555554433222222 3466666665543
No 277
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=61.29 E-value=72 Score=28.25 Aligned_cols=99 Identities=13% Similarity=0.146 Sum_probs=55.7
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCC-------hH---HHHHHcCCEEEEecCCCCCCCCCCHHHHH
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS-------YP---EMARIADATPVILPTRISENFLLDPKVLE 222 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~-------~~---~~~~~~g~~~~~v~~~~~~~~~~d~e~l~ 222 (429)
+....++||.|+...-..+.+.|.+.|.+|++..-.-.. .. ..++..|.++..+..+-. |.+.++
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~ 78 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIR-----EEDQVR 78 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTT-----CHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCC-----CHHHHH
Confidence 344567777776655556677788889887765432221 22 233445788888876532 566666
Q ss_pred hhccc------CCcEEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 223 SKLTE------KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 223 ~~l~~------~~~~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
+.++. +...++-+......+ ...+.++++++.++
T Consensus 79 ~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~v 120 (274)
T 3e03_A 79 AAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQV 120 (274)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhH
Confidence 65542 455554433322222 23566777766553
No 278
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=61.18 E-value=35 Score=30.28 Aligned_cols=98 Identities=11% Similarity=0.143 Sum_probs=52.7
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHH----HHcCCEEEEecCCCCCCCCCCHHHHHhhccc--
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTRISENFLLDPKVLESKLTE-- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-- 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-....... +..|.++..+..+- -|.+.++++++.
T Consensus 20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~ 94 (267)
T 1vl8_A 20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDV-----SNYEEVKKLLEAVK 94 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 3446777766655555667777888988776543221222222 22366676666543 256666665542
Q ss_pred ----CCcEEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 228 ----KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 ----~~~~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
+...++-+......+ ...+.++++++.++
T Consensus 95 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 129 (267)
T 1vl8_A 95 EKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEV 129 (267)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 455555433322222 22466677766554
No 279
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=61.14 E-value=57 Score=29.60 Aligned_cols=77 Identities=9% Similarity=0.061 Sum_probs=50.0
Q ss_pred CCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEE
Q 014172 186 APFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLV 265 (429)
Q Consensus 186 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~v 265 (429)
-|.|.+..+..+.....+..+-+.++ .-++.++++++.+.+.+++.+. | ++.++.+++.+.|+++ ++.+
T Consensus 50 ~~vy~sl~el~~~~~~Dv~Ii~vp~~----~~~~~~~ea~~~Gi~~vVi~t~----G--~~~~~~~~l~~~a~~~-gi~v 118 (288)
T 1oi7_A 50 VPVYDTVKEAVAHHEVDASIIFVPAP----AAADAALEAAHAGIPLIVLITE----G--IPTLDMVRAVEEIKAL-GSRL 118 (288)
T ss_dssp EEEESSHHHHHHHSCCSEEEECCCHH----HHHHHHHHHHHTTCSEEEECCS----C--CCHHHHHHHHHHHHHH-TCEE
T ss_pred EEeeCCHHHHhhcCCCCEEEEecCHH----HHHHHHHHHHHCCCCEEEEECC----C--CCHHHHHHHHHHHHHc-CCEE
Confidence 34556666666533555544443322 2567777777778886665332 3 3566788999999999 8999
Q ss_pred EEccCCcc
Q 014172 266 LSDEIYEH 273 (429)
Q Consensus 266 i~Deay~~ 273 (429)
+-..+.+.
T Consensus 119 igPNc~Gi 126 (288)
T 1oi7_A 119 IGGNCPGI 126 (288)
T ss_dssp EESSSCEE
T ss_pred EeCCCCeE
Confidence 87776554
No 280
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=60.83 E-value=37 Score=30.20 Aligned_cols=96 Identities=10% Similarity=0.076 Sum_probs=52.6
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-----
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE----- 227 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~----- 227 (429)
..++||.|+...-..+...|.+.|..|++..-.-..... .++..|.++..+..+- -|.+.+++.+..
T Consensus 5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDV-----TDRHSVAAFAQAAVDTW 79 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHHc
Confidence 346666666554455667778889887776533222222 2334477777776643 256666665532
Q ss_pred -CCcEEEEcCCCCCccC--CCCHHHHHHHHHH
Q 014172 228 -KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 228 -~~~~i~l~~p~NPtG~--~~~~~~l~~I~~~ 256 (429)
+...++-+....+.+. ..+.++++++.++
T Consensus 80 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~v 111 (264)
T 3tfo_A 80 GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDV 111 (264)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 4555554433333232 3466777665543
No 281
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=60.42 E-value=39 Score=29.83 Aligned_cols=97 Identities=10% Similarity=0.022 Sum_probs=54.0
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc----
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE---- 227 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~---- 227 (429)
...++||.|+...-..+...|.+.|..|++..-.-..... .+...|.++..+..+- -|.+.+++.+..
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~ 103 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDL-----SHSDAIAAFATGVLAA 103 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecC-----CCHHHHHHHHHHHHHh
Confidence 3456777666555555667778889887776543222222 2334577777776643 256666665542
Q ss_pred --CCcEEEEcCCC-CCcc--CCCCHHHHHHHHHH
Q 014172 228 --KSRLLILCSPS-NPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 --~~~~i~l~~p~-NPtG--~~~~~~~l~~I~~~ 256 (429)
+...++.+... .+.| ...+.++++++.++
T Consensus 104 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~v 137 (262)
T 3rkr_A 104 HGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAV 137 (262)
T ss_dssp HSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHH
T ss_pred cCCCCEEEECCCccCCCCCcccCCHHHHHHHHHH
Confidence 45666544332 2222 22466666665543
No 282
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=60.19 E-value=24 Score=31.53 Aligned_cols=98 Identities=9% Similarity=0.101 Sum_probs=54.6
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCC--------CC--C---h---HHHHHHcCCEEEEecCCCCCCCCCC
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF--------WV--S---Y---PEMARIADATPVILPTRISENFLLD 217 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~--------y~--~---~---~~~~~~~g~~~~~v~~~~~~~~~~d 217 (429)
....++||.|+...-..+...|.+.|..|++.+-. +. . . ...+...+.++..+..+- -|
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~ 84 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDT-----RD 84 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT-----TC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCC-----CC
Confidence 44567777776665566677788889887765321 10 1 1 122334566777776643 26
Q ss_pred HHHHHhhccc------CCcEEEEcCCCCCccC--CCCHHHHHHHHHH
Q 014172 218 PKVLESKLTE------KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 218 ~e~l~~~l~~------~~~~i~l~~p~NPtG~--~~~~~~l~~I~~~ 256 (429)
.+.+++.++. +...++-+....+.+. ..+.++++++.++
T Consensus 85 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~v 131 (277)
T 3tsc_A 85 FDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDI 131 (277)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 6777666542 4555554333332222 3466777766654
No 283
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=60.15 E-value=22 Score=31.72 Aligned_cols=96 Identities=9% Similarity=0.154 Sum_probs=53.8
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCC-------CC--Ch------HHHHHHcCCEEEEecCCCCCCCCCCH
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF-------WV--SY------PEMARIADATPVILPTRISENFLLDP 218 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~-------y~--~~------~~~~~~~g~~~~~v~~~~~~~~~~d~ 218 (429)
....++||.|+...-..+...|.+.|..|++..-. |. .- ...+...|.++..+..+- -|.
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~ 86 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADV-----RDR 86 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCT-----TCH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCC-----CCH
Confidence 44567777776655556677788889887765422 11 01 122334567777777643 266
Q ss_pred HHHHhhccc------CCcEEEEcCCCCCccCCCCHHHHHHHHHH
Q 014172 219 KVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARI 256 (429)
Q Consensus 219 e~l~~~l~~------~~~~i~l~~p~NPtG~~~~~~~l~~I~~~ 256 (429)
+.+++.++. +...++-+....+.+. +.++++++.++
T Consensus 87 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~--~~~~~~~~~~~ 128 (278)
T 3sx2_A 87 ESLSAALQAGLDELGRLDIVVANAGIAPMSA--GDDGWHDVIDV 128 (278)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEECCCCCCCSS--THHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCC--CHHHHHHHHHH
Confidence 777666542 4555554433333322 46667666553
No 284
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=59.60 E-value=58 Score=29.03 Aligned_cols=99 Identities=10% Similarity=0.090 Sum_probs=55.4
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc--
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE-- 227 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-- 227 (429)
+....++||.|+...-..+.+.|.+.|..|++..-.-..... .+...|.++..+..+- -|.+.+++.++.
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~d~~~v~~~~~~~~ 104 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDV-----TQPDQVRGMLDQMT 104 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 344567777776655556677788889887766543333332 2334455666665542 266666665542
Q ss_pred ----CCcEEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 228 ----KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 ----~~~~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
+...++-+......+ ...+.++++++.++
T Consensus 105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 139 (276)
T 3r1i_A 105 GELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDT 139 (276)
T ss_dssp HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 556655433322222 23466777766553
No 285
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=59.24 E-value=1.1e+02 Score=28.04 Aligned_cols=88 Identities=13% Similarity=0.190 Sum_probs=48.8
Q ss_pred cEEEecC---hHHHHHHHHHHhcCCC-CEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc-----c
Q 014172 157 QILVSNG---AKQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT-----E 227 (429)
Q Consensus 157 ~i~~t~G---~~~al~~~l~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~-----~ 227 (429)
-|++..| ..+++.++ +...+-| |.|++..|.|... +.++.+.+.+.++ .
T Consensus 79 pviaGvg~~~t~~ai~la-~~A~~~Gadavlv~~Pyy~~~---------------------~~~s~~~l~~~f~~va~a~ 136 (309)
T 3fkr_A 79 PVIVTTSHYSTQVCAARS-LRAQQLGAAMVMAMPPYHGAT---------------------FRVPEAQIFEFYARVSDAI 136 (309)
T ss_dssp CEEEECCCSSHHHHHHHH-HHHHHTTCSEEEECCSCBTTT---------------------BCCCHHHHHHHHHHHHHHC
T ss_pred cEEEecCCchHHHHHHHH-HHHHHcCCCEEEEcCCCCccC---------------------CCCCHHHHHHHHHHHHHhc
Confidence 3776655 55666644 3333445 8899888877210 0012222222221 1
Q ss_pred CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCC
Q 014172 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY 271 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay 271 (429)
+.-+++.+.|. ||..++.+ .+.++++++||+.=|=|++-
T Consensus 137 ~lPiilYn~P~--tg~~l~~~---~~~~La~~~pnIvgiK~~~~ 175 (309)
T 3fkr_A 137 AIPIMVQDAPA--SGTALSAP---FLARMAREIEQVAYFXIETP 175 (309)
T ss_dssp SSCEEEEECGG--GCCCCCHH---HHHHHHHHSTTEEEEEECSS
T ss_pred CCCEEEEeCCC--CCCCCCHH---HHHHHHhhCCCEEEEECCCc
Confidence 33466667774 89999954 45555656678877775553
No 286
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=59.18 E-value=27 Score=31.21 Aligned_cols=96 Identities=14% Similarity=0.160 Sum_probs=51.8
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------CC
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KS 229 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~~ 229 (429)
..++||.|+...-..+...|.+.|..|++..-.-.......+..+.++..+..+- -|.+.+++.++. +.
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~i 103 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDV-----TDPDSVRALFTATVEKFGRV 103 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCT-----TSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecC-----CCHHHHHHHHHHHHHHcCCC
Confidence 3456666555544556677788898887765433333444555555555555532 256666665542 45
Q ss_pred cEEEEcCCCC-Ccc--CCCCHHHHHHHHHH
Q 014172 230 RLLILCSPSN-PTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 230 ~~i~l~~p~N-PtG--~~~~~~~l~~I~~~ 256 (429)
..++-+.... +.+ ...+.++++++.++
T Consensus 104 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~v 133 (272)
T 4dyv_A 104 DVLFNNAGTGAPAIPMEDLTFAQWKQVVDT 133 (272)
T ss_dssp CEEEECCCCCCCSSCGGGCCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHh
Confidence 5555433322 212 23466777665543
No 287
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=59.16 E-value=64 Score=28.69 Aligned_cols=98 Identities=9% Similarity=0.074 Sum_probs=55.4
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCC--hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc---
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS--YPEMARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--- 227 (429)
+...-++||.|++.--..+...|.+.|-.|++..-.-.. ....+...|.++..+..+-. |.+++++.+..
T Consensus 5 L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~v~~~~~ 79 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQ-----DDAQCRDAVAQTIA 79 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecC-----CHHHHHHHHHHHHH
Confidence 444556666666554455567788889777665433222 22334455666666665432 56666555532
Q ss_pred ---CCcEEEEcCC--CCCccCCCCHHHHHHHHHH
Q 014172 228 ---KSRLLILCSP--SNPTGSVYPKNLLDEIARI 256 (429)
Q Consensus 228 ---~~~~i~l~~p--~NPtG~~~~~~~l~~I~~~ 256 (429)
+...+ ++|. +.+.....+.++|+++.++
T Consensus 80 ~~G~iDiL-VNnAGi~~~~~~~~~~e~~~~~~~v 112 (258)
T 4gkb_A 80 TFGRLDGL-VNNAGVNDGIGLDAGRDAFVASLER 112 (258)
T ss_dssp HHSCCCEE-EECCCCCCCCCTTSCHHHHHHHHHH
T ss_pred HhCCCCEE-EECCCCCCCCCccCCHHHHHHHHHH
Confidence 34444 4444 2334456677888877765
No 288
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=59.08 E-value=28 Score=30.60 Aligned_cols=96 Identities=8% Similarity=0.019 Sum_probs=49.6
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------C
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------K 228 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~ 228 (429)
...+++|.|+...-..+...|.+.|..|++..-.-.......+..|.++..+..+- -|.+.+++.++. +
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~ 79 (254)
T 1hdc_A 5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDV-----TIEEDWQRVVAYAREEFGS 79 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCT-----TCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecC-----CCHHHHHHHHHHHHHHcCC
Confidence 34577776665555566777788898877654321122233333354555555432 256666665542 4
Q ss_pred CcEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 229 SRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 229 ~~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
...++-+....+.+ ...+.+++++..+
T Consensus 80 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 108 (254)
T 1hdc_A 80 VDGLVNNAGISTGMFLETESVERFRKVVE 108 (254)
T ss_dssp CCEEEECCCCCCCSCGGGSCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 55555433322222 1245566655443
No 289
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=59.05 E-value=23 Score=31.62 Aligned_cols=99 Identities=9% Similarity=0.072 Sum_probs=54.8
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCC----hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS----YPEMARIADATPVILPTRISENFLLDPKVLESKLTE- 227 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~- 227 (429)
+....++||.|+...-..+...|.+.|..|++..-.-.. ....++..|.++..+..+- -|.+.+++.++.
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~d~~~v~~~~~~~ 100 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADV-----SQESEVEALFAAV 100 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHH
Confidence 344567777766655556677788889888764321111 1223344567777776643 266666665542
Q ss_pred -----CCcEEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 228 -----KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 -----~~~~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
+...++-+....+.+ ...+.++++++.++
T Consensus 101 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~v 136 (269)
T 4dmm_A 101 IERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDL 136 (269)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 455555433332222 23466777776654
No 290
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=59.04 E-value=14 Score=32.07 Aligned_cols=95 Identities=5% Similarity=-0.011 Sum_probs=52.9
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc---CCcEEE
Q 014172 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE---KSRLLI 233 (429)
Q Consensus 157 ~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~---~~~~i~ 233 (429)
.++||.|+...-..+...|.+.|..|++..-.-.......+..+.++..+..+. -|.+.+++.++. ....++
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~d~lv 77 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDL-----ASHQEVEQLFEQLDSIPSTVV 77 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCT-----TCHHHHHHHHHSCSSCCSEEE
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecC-----CCHHHHHHHHHHHhhcCCEEE
Confidence 477777776655666777888887777665433333444444455555555432 266777666543 334444
Q ss_pred EcCCCCCccC--CCCHHHHHHHHHH
Q 014172 234 LCSPSNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 234 l~~p~NPtG~--~~~~~~l~~I~~~ 256 (429)
.+....+.+. ..+.++++++.++
T Consensus 78 ~~Ag~~~~~~~~~~~~~~~~~~~~~ 102 (230)
T 3guy_A 78 HSAGSGYFGLLQEQDPEQIQTLIEN 102 (230)
T ss_dssp ECCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred EeCCcCCCCccccCCHHHHHHHHHH
Confidence 3333333232 3466777766654
No 291
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=58.79 E-value=47 Score=29.55 Aligned_cols=97 Identities=14% Similarity=0.118 Sum_probs=54.4
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCC---------C------hHHHHHHcCCEEEEecCCCCCCCCCCH
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV---------S------YPEMARIADATPVILPTRISENFLLDP 218 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~---------~------~~~~~~~~g~~~~~v~~~~~~~~~~d~ 218 (429)
....++||.|+...-..+.+.|.+.|..|++..-.-. . ....++..|.++..+..+- -|.
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~ 83 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDV-----KDR 83 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCT-----TCH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCC-----CCH
Confidence 4456777777665555667778888988776543210 0 1122344577777777643 266
Q ss_pred HHHHhhccc------CCcEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 219 KVLESKLTE------KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 219 e~l~~~l~~------~~~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
+.+++.++. +...++-+....+.+ ...+.++++++.+
T Consensus 84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 128 (281)
T 3s55_A 84 AALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIG 128 (281)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 666665542 455555433332222 2356777776554
No 292
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=58.76 E-value=23 Score=31.79 Aligned_cols=99 Identities=10% Similarity=0.125 Sum_probs=54.4
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCC-----------CC-----ChH---HHHHHcCCEEEEecCCCCCC
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF-----------WV-----SYP---EMARIADATPVILPTRISEN 213 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~-----------y~-----~~~---~~~~~~g~~~~~v~~~~~~~ 213 (429)
+....++||.|+...-..+.+.|.+.|..|++.+-. +. ... ..++..+.++..+..+-
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv--- 85 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDV--- 85 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCT---
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCC---
Confidence 344567777776665566677788889888765322 11 011 12233466777776643
Q ss_pred CCCCHHHHHhhccc------CCcEEEEcCCCCCccC---CCCHHHHHHHHHH
Q 014172 214 FLLDPKVLESKLTE------KSRLLILCSPSNPTGS---VYPKNLLDEIARI 256 (429)
Q Consensus 214 ~~~d~e~l~~~l~~------~~~~i~l~~p~NPtG~---~~~~~~l~~I~~~ 256 (429)
-|.+.+++.++. +...++-+......+. ..+.++++++.++
T Consensus 86 --~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 135 (286)
T 3uve_A 86 --RDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDI 135 (286)
T ss_dssp --TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHH
Confidence 266666665542 4555554433322222 3466777766553
No 293
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=58.71 E-value=84 Score=27.63 Aligned_cols=99 Identities=8% Similarity=0.008 Sum_probs=55.3
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCC---h---HHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS---Y---PEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~---~---~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
+....++||.|+...-..+...|.+.|..|++..-.-.. . ...++..|.++..+..+- -|.+.+++.++
T Consensus 9 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~ 83 (262)
T 3ksu_A 9 LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDL-----SNEEEVAKLFD 83 (262)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCC-----CSHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHH
Confidence 344567777776665566777888999888774321111 1 122333477887777653 26677766654
Q ss_pred c------CCcEEEEcCCCCCccC--CCCHHHHHHHHHH
Q 014172 227 E------KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 227 ~------~~~~i~l~~p~NPtG~--~~~~~~l~~I~~~ 256 (429)
. +...++-+....+.+. ..+.++++++.++
T Consensus 84 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 121 (262)
T 3ksu_A 84 FAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTI 121 (262)
T ss_dssp HHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHH
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 2 3444443333222222 3467777776654
No 294
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=58.70 E-value=44 Score=29.35 Aligned_cols=95 Identities=9% Similarity=0.092 Sum_probs=50.4
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCC-hHHHHHH---c-CCEEEEecCCCCCCCCCCHHHHHhhccc---
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS-YPEMARI---A-DATPVILPTRISENFLLDPKVLESKLTE--- 227 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~-~~~~~~~---~-g~~~~~v~~~~~~~~~~d~e~l~~~l~~--- 227 (429)
..+++|.|+...-..+...|.+.|..|++..-.-.. .....+. . |.++..+..+- -|.+.+++.++.
T Consensus 5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~ 79 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADL-----SKGEAVRGLVDNAVR 79 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCT-----TSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCC-----CCHHHHHHHHHHHHH
Confidence 456777665554555667778889887776533222 2222221 1 66666666543 256666665542
Q ss_pred ---CCcEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 228 ---KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 228 ---~~~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
+...++-+....+.+ ...+.+++++..+
T Consensus 80 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 112 (260)
T 1x1t_A 80 QMGRIDILVNNAGIQHTALIEDFPTEKWDAILA 112 (260)
T ss_dssp HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 455555433322222 1246666666544
No 295
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=58.58 E-value=32 Score=31.58 Aligned_cols=97 Identities=10% Similarity=0.030 Sum_probs=54.0
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCC----------CCCh---HHHHHHcCCEEEEecCCCCCCCCCCHHHH
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF----------WVSY---PEMARIADATPVILPTRISENFLLDPKVL 221 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~----------y~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~e~l 221 (429)
...++||.|+...-..+...|.+.|..|++..-. -... ...+...|.++..+..+- -|.+.+
T Consensus 27 gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v 101 (322)
T 3qlj_A 27 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNV-----ADWDQA 101 (322)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCT-----TSHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHH
Confidence 3456677666554455667788889888775432 1112 233445677888777643 266676
Q ss_pred Hhhccc------CCcEEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 222 ESKLTE------KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 222 ~~~l~~------~~~~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
++.++. +...++-+......+ ...+.++++++.++
T Consensus 102 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 144 (322)
T 3qlj_A 102 AGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAV 144 (322)
T ss_dssp HHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 665542 455554333222222 23566777766554
No 296
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=58.55 E-value=44 Score=29.16 Aligned_cols=96 Identities=13% Similarity=0.065 Sum_probs=51.8
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCCCCHHHHHhhccc----
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE---- 227 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~---- 227 (429)
...+++|.|+...-..+...|.+.|..|++..-.-...... ++..|.++..+..+- -|.+.+++.++.
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~~~~~~~~~~~~~~~~ 81 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDV-----ADRQGVDAAVASTVEA 81 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 34677777766555566777888898777654321111122 222366666666543 256666665542
Q ss_pred --CCcEEEEcCCCCCccC--CCCHHHHHHHHH
Q 014172 228 --KSRLLILCSPSNPTGS--VYPKNLLDEIAR 255 (429)
Q Consensus 228 --~~~~i~l~~p~NPtG~--~~~~~~l~~I~~ 255 (429)
+...++-+....+.+. ..+.++++++.+
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 113 (247)
T 2jah_A 82 LGGLDILVNNAGIMLLGPVEDADTTDWTRMID 113 (247)
T ss_dssp HSCCSEEEECCCCCCCCCSTTCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 4566554433333332 346666666554
No 297
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=57.98 E-value=22 Score=31.63 Aligned_cols=98 Identities=8% Similarity=0.055 Sum_probs=53.8
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCC-CCCC---hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc--
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAP-FWVS---YPEMARIADATPVILPTRISENFLLDPKVLESKLTE-- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p-~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-- 227 (429)
....++||.|+...-..+...|.+.|..|++..- .-.. ....++..|.++..+..+- -|.+.+++.++.
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 91 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADI-----RQVPEIVKLFDQAV 91 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 3445677766655555567778888988876422 1111 1223344577777777643 266666665542
Q ss_pred ----CCcEEEEcCCCCCccC--CCCHHHHHHHHHH
Q 014172 228 ----KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 228 ----~~~~i~l~~p~NPtG~--~~~~~~l~~I~~~ 256 (429)
+...++-+....+.+. ..+.+++++..++
T Consensus 92 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 126 (270)
T 3is3_A 92 AHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSL 126 (270)
T ss_dssp HHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 4555543322222232 3467777776654
No 298
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=57.63 E-value=67 Score=28.63 Aligned_cols=95 Identities=7% Similarity=0.020 Sum_probs=50.1
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCCCCHHHHHhhcc------
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLT------ 226 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~------ 226 (429)
..++||.|+...-..+...|.+.|..|++..-.-...... ++..|.++..+..+. -|.+.+++.++
T Consensus 45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-----~d~~~v~~~~~~~~~~~ 119 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDV-----SKKEEISEVINKILTEH 119 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCT-----TCHHHHHHHHHHHHHHC
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCC-----CCHHHHHHHHHHHHHhc
Confidence 4577776665555556777888898877743211111121 222366666666543 26677766653
Q ss_pred cCCcEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 227 EKSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 227 ~~~~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
.+...++-+....+.+ ...+.++++++.+
T Consensus 120 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 150 (285)
T 2c07_A 120 KNVDILVNNAGITRDNLFLRMKNDEWEDVLR 150 (285)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 2455555443322222 2245566655544
No 299
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=57.56 E-value=31 Score=30.59 Aligned_cols=94 Identities=16% Similarity=0.122 Sum_probs=53.7
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------CCc
Q 014172 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSR 230 (429)
Q Consensus 157 ~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~~~ 230 (429)
.|+||.|++.--..+...|.+.|..|++.+-.-..... +...+.++..+..+- -|.+++++.++. +..
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~-~~~~~~~~~~~~~Dv-----~~~~~v~~~v~~~~~~~g~iD 77 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSAD-FAKERPNLFYFHGDV-----ADPLTLKKFVEYAMEKLQRID 77 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHTTCTTEEEEECCT-----TSHHHHHHHHHHHHHHHSCCC
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHhcCCEEEEEecC-----CCHHHHHHHHHHHHHHcCCCC
Confidence 57777777766666777788999888876543212222 223345566665542 256666665532 444
Q ss_pred EEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 231 LLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 231 ~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
.++-+...++.+ ..++.++|+++.++
T Consensus 78 iLVNNAG~~~~~~~~~~~~e~~~~~~~v 105 (247)
T 3ged_A 78 VLVNNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp EEEECCCCCCCCGGGTCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 444333333333 34577888887765
No 300
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=57.37 E-value=40 Score=30.55 Aligned_cols=97 Identities=8% Similarity=-0.016 Sum_probs=53.6
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCCCCHHHHHhhccc---
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--- 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-...... ++..|.++..+..+- -|.+.+++.++.
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 104 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDV-----RHLDEMVRLADEAFR 104 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccC-----CCHHHHHHHHHHHHH
Confidence 345677777666555556777788898877765432222222 233466777766543 266666665542
Q ss_pred ---CCcEEEEcCCCCCccC--CCCHHHHHHHHH
Q 014172 228 ---KSRLLILCSPSNPTGS--VYPKNLLDEIAR 255 (429)
Q Consensus 228 ---~~~~i~l~~p~NPtG~--~~~~~~l~~I~~ 255 (429)
+...++-+......|. ..+.++++++.+
T Consensus 105 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 137 (301)
T 3tjr_A 105 LLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVID 137 (301)
T ss_dssp HHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 4555554333222222 346666666544
No 301
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=57.15 E-value=22 Score=31.03 Aligned_cols=77 Identities=10% Similarity=0.068 Sum_probs=44.5
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc--CCcE
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE--KSRL 231 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--~~~~ 231 (429)
....|+||.|+...-..+...|.+.|..|++..-.-.......+..+.++..+..+. -|.+.+++.+.. +...
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~id~ 87 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNL-----ANKEECSNLISKTSNLDI 87 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCT-----TSHHHHHHHHHTCSCCSE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCC-----CCHHHHHHHHHhcCCCCE
Confidence 445677777666555556677888898887765433333344444444555554432 266777766653 4555
Q ss_pred EEEc
Q 014172 232 LILC 235 (429)
Q Consensus 232 i~l~ 235 (429)
++.+
T Consensus 88 li~~ 91 (249)
T 3f9i_A 88 LVCN 91 (249)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 5543
No 302
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=57.12 E-value=72 Score=27.81 Aligned_cols=95 Identities=13% Similarity=0.094 Sum_probs=50.5
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCC-ChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------C
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV-SYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------K 228 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~ 228 (429)
..+++|.|+...-..+...|.+.|..|++..-.-. .....+...|.++..+..+- -|.+.+++.++. +
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~ 79 (255)
T 2q2v_A 5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADL-----SDVAQIEALFALAEREFGG 79 (255)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCT-----TSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCC-----CCHHHHHHHHHHHHHHcCC
Confidence 45677766655555566777888988776543222 11122223366666666542 266777666542 4
Q ss_pred CcEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 229 SRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 229 ~~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
...++-+....+.+ ...+.++++++.+
T Consensus 80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (255)
T 2q2v_A 80 VDILVNNAGIQHVAPVEQFPLESWDKIIA 108 (255)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 55555433322222 2245666665443
No 303
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=56.75 E-value=71 Score=28.37 Aligned_cols=98 Identities=7% Similarity=-0.004 Sum_probs=53.3
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCCCCHHHHHhhcc---
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLT--- 226 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~--- 226 (429)
+....++||.|+...-..+...|.+.|..|++..-. ...... +...|.++..+..+.. |.+.+++...
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~ 102 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLA-----DLEGAANVAEELA 102 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTT-----CHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHHHHHH
Confidence 444567777776665556677788889887776522 222222 2334677777766432 5555554422
Q ss_pred --cCCcEEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 227 --EKSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 227 --~~~~~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
.+...++-+......+ ...+.+++++..++
T Consensus 103 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 136 (273)
T 3uf0_A 103 ATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTV 136 (273)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred hcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHH
Confidence 2455554433322222 13466677666553
No 304
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=56.60 E-value=59 Score=28.48 Aligned_cols=97 Identities=12% Similarity=-0.029 Sum_probs=51.8
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCCCCHHHHHhhcc----
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLT---- 226 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~---- 226 (429)
....+++|.|+...-..+...|.+.|..|++..-.-...... ++..|.++..+..+- -|.+.+++.++
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 82 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDL-----SSRSERQELMNTVAN 82 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 345677877766555566777888898877654321111111 223466777766543 26666666553
Q ss_pred ---cCCcEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 227 ---EKSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 227 ---~~~~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
.+...++-+....+.+ ...+.++++++.+
T Consensus 83 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 116 (260)
T 2ae2_A 83 HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMS 116 (260)
T ss_dssp HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 2455554333222222 2346666666544
No 305
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=56.18 E-value=50 Score=28.77 Aligned_cols=98 Identities=8% Similarity=0.035 Sum_probs=54.0
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCCCCHHHHHhhccc--
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE-- 227 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-- 227 (429)
+....++||.|+...-..+...|.+.|..|++..-.-...... ++..+.++..+..+- -|.+.+++.++.
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~ 81 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDV-----SDPESAKAMADRTL 81 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHH
Confidence 3445677777766655666777888898877765432222222 233477777777643 256666665542
Q ss_pred ----CCcEEEEcCCC---CCcc--CCCCHHHHHHHHH
Q 014172 228 ----KSRLLILCSPS---NPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 228 ----~~~~i~l~~p~---NPtG--~~~~~~~l~~I~~ 255 (429)
+...++.+... .+.+ ...+.+++++..+
T Consensus 82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~ 118 (253)
T 3qiv_A 82 AEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMS 118 (253)
T ss_dssp HHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHh
Confidence 45555543322 1111 2346666665543
No 306
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=56.10 E-value=34 Score=30.32 Aligned_cols=93 Identities=14% Similarity=0.113 Sum_probs=53.9
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc--CCcEE
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE--KSRLL 232 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--~~~~i 232 (429)
-..+++|.|++.--..+.+.|.+.|..|++.+-.-... ....+.++..+..+- -|.+++++.++. +...+
T Consensus 11 GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~---~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~g~iDiL 82 (242)
T 4b79_A 11 GQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGV---HAPRHPRIRREELDI-----TDSQRLQRLFEALPRLDVL 82 (242)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTST---TSCCCTTEEEEECCT-----TCHHHHHHHHHHCSCCSEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH---hhhhcCCeEEEEecC-----CCHHHHHHHHHhcCCCCEE
Confidence 34667777666655666777888998887765332211 122344555555532 256777766653 44444
Q ss_pred EEcCC-CCCccCCCCHHHHHHHHHH
Q 014172 233 ILCSP-SNPTGSVYPKNLLDEIARI 256 (429)
Q Consensus 233 ~l~~p-~NPtG~~~~~~~l~~I~~~ 256 (429)
++|. -+.....++.++|+++.++
T Consensus 83 -VNNAGi~~~~~~~~~~~w~~~~~v 106 (242)
T 4b79_A 83 -VNNAGISRDREEYDLATFERVLRL 106 (242)
T ss_dssp -EECCCCCCGGGGGSHHHHHHHHHH
T ss_pred -EECCCCCCCcccCCHHHHHHHHHH
Confidence 4443 3333455677888888775
No 307
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=56.09 E-value=76 Score=25.33 Aligned_cols=111 Identities=12% Similarity=0.101 Sum_probs=67.0
Q ss_pred CCCCCCCcEEEecCh--HHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc
Q 014172 150 GLSYTPDQILVSNGA--KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 227 (429)
Q Consensus 150 g~~~~~~~i~~t~G~--~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~ 227 (429)
|..++...++++.+. ...+..+.+.+.+-|=+|+... +....++..|..+..|.-..+++..-+...+.+.+.+
T Consensus 19 g~~lP~~gvliSv~d~dK~~l~~~a~~l~~lGf~i~AT~----GTa~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~ 94 (143)
T 2yvq_A 19 GFKIPQKGILIGIQQSFRPRFLGVAEQLHNEGFKLFATE----ATSDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRD 94 (143)
T ss_dssp SCCCCCSEEEEECCGGGHHHHHHHHHHHHTTTCEEEEEH----HHHHHHHHTTCCCEEECCGGGC-----CBCHHHHHHT
T ss_pred CCCCCCCCEEEEecccchHHHHHHHHHHHHCCCEEEECc----hHHHHHHHcCCeEEEEEeccCCCcccccccHHHHHHC
Confidence 444544458888776 6666667777878888887665 3345667789988888643332110000234555554
Q ss_pred CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEc
Q 014172 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 268 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~D 268 (429)
+---++|+.|.. ...+..+-..|.+.|-+| ++.++..
T Consensus 95 g~i~lVInt~~~---~~~~~~d~~~iRR~Av~~-~IP~~T~ 131 (143)
T 2yvq_A 95 GSIDLVINLPNN---NTKFVHDNYVIRRTAVDS-GIPLLTN 131 (143)
T ss_dssp TSCCEEEECCCC---CGGGHHHHHHHHHHHHHT-TCCEECS
T ss_pred CCceEEEECCCC---CCcCCccHHHHHHHHHHh-CCCeEcC
Confidence 433445555532 122356788899999999 8988743
No 308
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=56.05 E-value=53 Score=28.86 Aligned_cols=97 Identities=8% Similarity=0.068 Sum_probs=50.4
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHH---c-CCEEEEecCCCCCCCCCCHHHHHhhccc--
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI---A-DATPVILPTRISENFLLDPKVLESKLTE-- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~---~-g~~~~~v~~~~~~~~~~d~e~l~~~l~~-- 227 (429)
....+++|.|+...-..+...|.+.|..|++..-.-.......+. . |.++..+..+- -|.+.+++.++.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~ 80 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDV-----ATPEGVDAVVESVR 80 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHHHHH
Confidence 345677777766555566777788898877654321111222111 1 66666666542 256666665542
Q ss_pred ----CCcEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 228 ----KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 228 ----~~~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
+...++-+......+ ...+.+++++..+
T Consensus 81 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (263)
T 3ai3_A 81 SSFGGADILVNNAGTGSNETIMEAADEKWQFYWE 114 (263)
T ss_dssp HHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 455555433322222 1245666655443
No 309
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=55.86 E-value=52 Score=28.94 Aligned_cols=98 Identities=7% Similarity=0.109 Sum_probs=53.1
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEc-CCCCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc--
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIP-APFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE-- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~-~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-- 227 (429)
....++||.|+...-..+...|.+.|..|++. ...-..... .++..|.++..+..+- -|.+.+++.++.
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 81 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADL-----TNAAEVEAAISAAA 81 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHHHHH
Confidence 44567777776655556677788889888765 332222222 2233466666666542 266666665542
Q ss_pred ----CCcEEEEcCCCC-Ccc--CCCCHHHHHHHHHH
Q 014172 228 ----KSRLLILCSPSN-PTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 ----~~~~i~l~~p~N-PtG--~~~~~~~l~~I~~~ 256 (429)
+...++-+.... +.+ ...+.++++++.++
T Consensus 82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~v 117 (259)
T 3edm_A 82 DKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDV 117 (259)
T ss_dssp HHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHH
Confidence 344444332222 222 24567777776654
No 310
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=55.71 E-value=40 Score=30.18 Aligned_cols=96 Identities=11% Similarity=0.023 Sum_probs=52.7
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-----
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE----- 227 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~----- 227 (429)
..++||.|+...-..+...|.+.|..|++..-.-...... ++..|.++..+..+- -|.+.+++.+..
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDV-----TSTDEVHAAVAAAVERF 99 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHHHHc
Confidence 4577777666555566777888898887665332222222 233466777776543 266666665542
Q ss_pred -CCcEEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 228 -KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 -~~~~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
+...++-+....+.+ ...+.++++++.++
T Consensus 100 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~v 131 (279)
T 3sju_A 100 GPIGILVNSAGRNGGGETADLDDALWADVLDT 131 (279)
T ss_dssp CSCCEEEECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 455554433332222 23566677665543
No 311
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=55.45 E-value=1.2e+02 Score=27.24 Aligned_cols=168 Identities=16% Similarity=0.141 Sum_probs=89.1
Q ss_pred HHHHHHHHHhcCCCeEEcCCCCCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEe
Q 014172 83 ITDQATALAQAGVSVIRLAAGEPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVS 161 (429)
Q Consensus 83 ~~~~~~~~~~~g~~~i~L~~g~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t 161 (429)
..+.++.+.+.|.++|.|+.-..+.-. -+.+.++..+++..+. .....-+.+.+. ++. +.++ | +++.
T Consensus 34 ~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~-------~~~~~~~~v~~i-r~~-~~~~-P--ivlm 101 (267)
T 3vnd_A 34 SLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGT-------TSSDCFDIITKV-RAQ-HPDM-P--IGLL 101 (267)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTC-------CHHHHHHHHHHH-HHH-CTTC-C--EEEE
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCC-------CHHHHHHHHHHH-Hhc-CCCC-C--EEEE
Confidence 345666777788888888766544222 4677777777877642 112333333332 111 1112 2 4333
Q ss_pred cCh----HHHHHHHHHHhcCCC-CEEEEcCCCCC---ChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEE
Q 014172 162 NGA----KQSILQAVLAVCSPG-DEVIIPAPFWV---SYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLI 233 (429)
Q Consensus 162 ~G~----~~al~~~l~~l~~~g-d~Vlv~~p~y~---~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~ 233 (429)
.=. .-++...+..+.+.| |.|++++-.+. .+...++..|.+.+.+-.+ . -+.+.+++........|+
T Consensus 102 ~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP--~---t~~eri~~i~~~~~gfvY 176 (267)
T 3vnd_A 102 LYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPP--N---ADADTLKMVSEQGEGYTY 176 (267)
T ss_dssp ECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECT--T---CCHHHHHHHHHHCCSCEE
T ss_pred ecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECC--C---CCHHHHHHHHHhCCCcEE
Confidence 111 112344455555556 88888876544 3456777889987655422 2 156777776655555777
Q ss_pred EcCCCCCccCCCC-HHHHHHHHHHHHhCCCeEEEE
Q 014172 234 LCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLS 267 (429)
Q Consensus 234 l~~p~NPtG~~~~-~~~l~~I~~~a~~~~~i~vi~ 267 (429)
+.+-.--||..-. .+++.++++-++++-++.|++
T Consensus 177 ~vS~~GvTG~~~~~~~~~~~~v~~vr~~~~~pv~v 211 (267)
T 3vnd_A 177 LLSRAGVTGTESKAGEPIENILTQLAEFNAPPPLL 211 (267)
T ss_dssp ESCCCCCC--------CHHHHHHHHHTTTCCCEEE
T ss_pred EEecCCCCCCccCCcHHHHHHHHHHHHhcCCCEEE
Confidence 7666556886531 223555666666552455554
No 312
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=54.98 E-value=1.2e+02 Score=27.24 Aligned_cols=168 Identities=14% Similarity=0.037 Sum_probs=86.0
Q ss_pred HHHHHHHHhcCCCeEEcCCCCCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEec
Q 014172 84 TDQATALAQAGVSVIRLAAGEPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSN 162 (429)
Q Consensus 84 ~~~~~~~~~~g~~~i~L~~g~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~ 162 (429)
.+.++.+.+.|.++|.|+.-..+.-. .|.+.++..+++.++. .....-+.+.+.- +. +..++ =++++-
T Consensus 37 ~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~-------~~~~~~~~v~~~r-~~-~~~~P--ivlm~Y 105 (271)
T 3nav_A 37 LAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKT-------TPDICFELIAQIR-AR-NPETP--IGLLMY 105 (271)
T ss_dssp HHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTC-------CHHHHHHHHHHHH-HH-CTTSC--EEEEEC
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCC-------CHHHHHHHHHHHH-hc-CCCCC--EEEEec
Confidence 34566666778888887765543222 3567777777877642 1233334443322 11 11111 123221
Q ss_pred -C--hHHHHHHHHHHhcCCC-CEEEEcCCCCCC---hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEc
Q 014172 163 -G--AKQSILQAVLAVCSPG-DEVIIPAPFWVS---YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC 235 (429)
Q Consensus 163 -G--~~~al~~~l~~l~~~g-d~Vlv~~p~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~ 235 (429)
+ -.-++...+..+.+.| |.|++++-.+.. +...++..|...+.+-.. . -+.+.+++........|++.
T Consensus 106 ~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap--~---t~~eri~~i~~~~~gfiY~v 180 (271)
T 3nav_A 106 ANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPP--T---ASDETLRAVAQLGKGYTYLL 180 (271)
T ss_dssp HHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECT--T---CCHHHHHHHHHHCCSCEEEC
T ss_pred CcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECC--C---CCHHHHHHHHHHCCCeEEEE
Confidence 1 0112333445555555 888888765543 456778889987765432 1 14577766655555667765
Q ss_pred CCCCCccCCC-CHHHHHHHHHHHHhCCCeEEEE
Q 014172 236 SPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLS 267 (429)
Q Consensus 236 ~p~NPtG~~~-~~~~l~~I~~~a~~~~~i~vi~ 267 (429)
+-.--||..- ..+++.++++-++++-++.+++
T Consensus 181 s~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~v 213 (271)
T 3nav_A 181 SRAGVTGAETKANMPVHALLERLQQFDAPPALL 213 (271)
T ss_dssp CCC--------CCHHHHHHHHHHHHTTCCCEEE
T ss_pred eccCCCCcccCCchhHHHHHHHHHHhcCCCEEE
Confidence 5544678652 1234666666666653455554
No 313
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=54.90 E-value=54 Score=29.33 Aligned_cols=98 Identities=9% Similarity=0.155 Sum_probs=54.0
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCC-hHHHHH----HcCCEEEEecCCCCCCCCCCHHHHHhhccc-
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS-YPEMAR----IADATPVILPTRISENFLLDPKVLESKLTE- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~-~~~~~~----~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~- 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-.. ...... ..+.++..+..+- -|.+.+++.++.
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~ 98 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADM-----TKPSEIADMMAMV 98 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCT-----TCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCC-----CCHHHHHHHHHHH
Confidence 34567777776665566677788889888776532111 112221 1256777776543 266666665542
Q ss_pred -----CCcEEEEcCCCCCccC--CCCHHHHHHHHHH
Q 014172 228 -----KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 228 -----~~~~i~l~~p~NPtG~--~~~~~~l~~I~~~ 256 (429)
+...++-+....+.+. ..+.++++++.++
T Consensus 99 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 134 (281)
T 3v2h_A 99 ADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAV 134 (281)
T ss_dssp HHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 4555554333332232 3466777766554
No 314
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=54.88 E-value=1e+02 Score=28.18 Aligned_cols=85 Identities=14% Similarity=0.236 Sum_probs=46.5
Q ss_pred cEEEecCh---HHHHHHHHHHhcCCC-CEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhc----cc-
Q 014172 157 QILVSNGA---KQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL----TE- 227 (429)
Q Consensus 157 ~i~~t~G~---~~al~~~l~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l----~~- 227 (429)
-|++..|+ .+++.++-.+ -+-| |-|++..|.|... +.+.+.+.+ +.
T Consensus 83 pViaGvg~~st~~ai~la~~A-~~~Gadavlv~~P~y~~~------------------------s~~~l~~~f~~va~a~ 137 (306)
T 1o5k_A 83 PVIVGAGTNSTEKTLKLVKQA-EKLGANGVLVVTPYYNKP------------------------TQEGLYQHYKYISERT 137 (306)
T ss_dssp CEEEECCCSCHHHHHHHHHHH-HHHTCSEEEEECCCSSCC------------------------CHHHHHHHHHHHHTTC
T ss_pred eEEEcCCCccHHHHHHHHHHH-HhcCCCEEEECCCCCCCC------------------------CHHHHHHHHHHHHHhC
Confidence 37777664 5666644333 3334 8888888887531 112222211 11
Q ss_pred CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccC
Q 014172 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 270 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Dea 270 (429)
+.-+++.+.|. .||..++.+.+.+| ++++|++.=|=|..
T Consensus 138 ~lPiilYn~P~-~tg~~l~~~~~~~L---a~~~pnIvgiKdss 176 (306)
T 1o5k_A 138 DLGIVVYNVPG-RTGVNVLPETAARI---AADLKNVVGIXEAN 176 (306)
T ss_dssp SSCEEEEECHH-HHSCCCCHHHHHHH---HHHCTTEEEEEECC
T ss_pred CCCEEEEeCcc-ccCcCCCHHHHHHH---HHhCCCEEEEeCCC
Confidence 23355556665 38888885555444 43456777666644
No 315
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=54.80 E-value=44 Score=29.45 Aligned_cols=96 Identities=18% Similarity=0.128 Sum_probs=48.4
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------ 227 (429)
....+++|.|+...-..+...|.+.|..|++..-.-.......+..+.++..+..+- -|.+.+++.++.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 80 (260)
T 1nff_A 6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDV-----TQPAQWKAAVDTAVTAFG 80 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecC-----CCHHHHHHHHHHHHHHcC
Confidence 334577776665555556677788898877654321122222233332344444432 266676666542
Q ss_pred CCcEEEEcCCCCCccC--CCCHHHHHHHH
Q 014172 228 KSRLLILCSPSNPTGS--VYPKNLLDEIA 254 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~--~~~~~~l~~I~ 254 (429)
+...++-+......+. ..+.++++++.
T Consensus 81 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~ 109 (260)
T 1nff_A 81 GLHVLVNNAGILNIGTIEDYALTEWQRIL 109 (260)
T ss_dssp CCCEEEECCCCCCCBCTTTSCHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHH
Confidence 4555554333222221 24566665443
No 316
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=54.77 E-value=30 Score=30.94 Aligned_cols=98 Identities=8% Similarity=0.119 Sum_probs=54.1
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCC--------CC--C------hHHHHHHcCCEEEEecCCCCCCCCCC
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF--------WV--S------YPEMARIADATPVILPTRISENFLLD 217 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~--------y~--~------~~~~~~~~g~~~~~v~~~~~~~~~~d 217 (429)
....++||.|+...-..+.+.|.+.|..|++..-. |. . ....++..|.++..+..+- -|
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~ 88 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDV-----RD 88 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCT-----TC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCC-----CC
Confidence 44567777776655556677788889888775321 11 1 1122334566777776543 26
Q ss_pred HHHHHhhccc------CCcEEEEcCCCCCccC--CCCHHHHHHHHHH
Q 014172 218 PKVLESKLTE------KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 218 ~e~l~~~l~~------~~~~i~l~~p~NPtG~--~~~~~~l~~I~~~ 256 (429)
.+.+++.++. +...++-+......+. ..+.++++++.++
T Consensus 89 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 135 (280)
T 3pgx_A 89 DAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGV 135 (280)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhh
Confidence 6666666542 4555554433332222 3466777766553
No 317
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=54.65 E-value=60 Score=28.93 Aligned_cols=99 Identities=12% Similarity=0.061 Sum_probs=52.9
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc---
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLT--- 226 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~--- 226 (429)
+....++||.|+...-..+...|.+.|..|++..-.-..... .+...|.++..+..+-. |.+.+++.++
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~~~~~~~~~~ 105 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLS-----EAGAGTDLIERAE 105 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTT-----STTHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCC-----CHHHHHHHHHHHH
Confidence 344567777776655566677788889888766543333332 23345777777766432 3333333332
Q ss_pred --cCCcEEEEcCCCCCccC--CCCHHHHHHHHHH
Q 014172 227 --EKSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 227 --~~~~~i~l~~p~NPtG~--~~~~~~l~~I~~~ 256 (429)
.+...++.+......+. ..+.++++++.++
T Consensus 106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 139 (275)
T 4imr_A 106 AIAPVDILVINASAQINATLSALTPNDLAFQLAV 139 (275)
T ss_dssp HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 24555554333222222 3466777666553
No 318
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=54.49 E-value=62 Score=28.73 Aligned_cols=99 Identities=12% Similarity=0.089 Sum_probs=55.9
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCEEEEc-CCCCCC---hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIP-APFWVS---YPEMARIADATPVILPTRISENFLLDPKVLESKLTE- 227 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~-~p~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~- 227 (429)
+....++||.|+...-..+...|.+.|..|++. ...-.. ....++..|.++..+..+. -|.+.+++.+..
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~ 103 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADN-----RDAEAIEQAIRET 103 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHH
Confidence 445567777776655566677788899887765 321111 1223344577777777643 266777666542
Q ss_pred -----CCcEEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 228 -----KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 -----~~~~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
+...++-+......+ ...+.++++++.++
T Consensus 104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 139 (271)
T 3v2g_A 104 VEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAV 139 (271)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 455554333322222 23466777776664
No 319
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=54.34 E-value=47 Score=29.62 Aligned_cols=96 Identities=13% Similarity=0.036 Sum_probs=50.3
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc----
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE---- 227 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~---- 227 (429)
...++||.|+...-..+...|.+.|..|++..-.-..... .++..|.++..+..+- -|.+.+++.+..
T Consensus 22 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 96 (277)
T 2rhc_B 22 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDV-----RSVPEIEALVAAVVER 96 (277)
T ss_dssp SCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 3467777666555555667777888877765432111111 2223366666666542 256666665542
Q ss_pred --CCcEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 228 --KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 228 --~~~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
+...++-+....+.+ ...+.++++++.+
T Consensus 97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 128 (277)
T 2rhc_B 97 YGPVDVLVNNAGRPGGGATAELADELWLDVVE 128 (277)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 455555433322222 1246666666554
No 320
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=54.18 E-value=18 Score=35.96 Aligned_cols=108 Identities=11% Similarity=0.069 Sum_probs=59.6
Q ss_pred CCCCCCCcEEEecChHHHHHHHHHHhc---CC---CCE-----EEEcCCCCCC-------------------hHHHHHHc
Q 014172 150 GLSYTPDQILVSNGAKQSILQAVLAVC---SP---GDE-----VIIPAPFWVS-------------------YPEMARIA 199 (429)
Q Consensus 150 g~~~~~~~i~~t~G~~~al~~~l~~l~---~~---gd~-----Vlv~~p~y~~-------------------~~~~~~~~ 199 (429)
-+.++++.|.++..+..+++..++.|. .. |.. .+...|.|.- +.+.+...
T Consensus 101 ~L~v~~~~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~ma~~ 180 (507)
T 1now_A 101 TLLVKEPVAVLKANRVWGALRGLETFSQLVYQDSYGTFTINESTIIDSPRFSHRGILIDTSRHYLPVKIILKTLDAMAFN 180 (507)
T ss_dssp EEEECSSEEEEEESSHHHHHHHHHHHHHHCEECTTSCEEEEEEEEEECCSCSEEEEEEESSSSCCCHHHHHHHHHHHHHT
T ss_pred EEEEcCCeEEEEECCHHHHHHHHHHHHHHHhhccCceEEeccEEEEecCccceeeeeeccCCCCCCHHHHHHHHHHHHHh
Confidence 344667789999888777776776652 22 111 2444565531 12233344
Q ss_pred CCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEE
Q 014172 200 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 267 (429)
Q Consensus 200 g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~ 267 (429)
+.++....+..+.+|.+......++-... ...| |..|+++++++|++.|+++ ++-||-
T Consensus 181 KlN~lh~HltDdq~wr~e~~~~P~Lt~~G--------a~~~-~~~YT~~di~eiv~yA~~r-gI~VIP 238 (507)
T 1now_A 181 KFNVLHWHIVDDQSFPYQSITFPELSNKG--------SYSL-SHVYTPNDVRMVIEYARLR-GIRVLP 238 (507)
T ss_dssp TCCEEEEECCCSSCCCBCCSSCHHHHHHH--------SSST-TSCBCHHHHHHHHHHHHHT-TCEEEE
T ss_pred CCcEEEEeeccCccceeeccchhhhhccc--------CcCC-CCCCCHHHHHHHHHHHHHc-CCEEEE
Confidence 55554444433333433322111110000 0012 6789999999999999999 998883
No 321
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=54.08 E-value=41 Score=29.59 Aligned_cols=97 Identities=10% Similarity=0.016 Sum_probs=48.5
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------ 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-............++..+..+- -|.+.++++++.
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~d~~~v~~~~~~~~~~~g 85 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDV-----TKRASVDAAMQKAIDALG 85 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCT-----TCHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeC-----CCHHHHHHHHHHHHHHcC
Confidence 334677776665555556677788898877654321122222222222333343322 256666665542
Q ss_pred CCcEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 228 KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
+...++-+....+.+ ...+.+++++..+
T Consensus 86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 115 (263)
T 3ak4_A 86 GFDLLCANAGVSTMRPAVDITDEEWDFNFD 115 (263)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 455555433322222 2346666666554
No 322
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=53.85 E-value=61 Score=28.16 Aligned_cols=78 Identities=18% Similarity=0.249 Sum_probs=43.5
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChH---HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc---
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--- 227 (429)
....+++|.|+...-..+...|.+.|..|++..-.-.... ..++..+.++..+..+- -|.+.+++.++.
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 86 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDV-----TNTESVQNAVRSVHE 86 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecC-----CCHHHHHHHHHHHHH
Confidence 3456777766655555566777788888776543211111 12233466666666542 266777666542
Q ss_pred ---CCcEEEEcC
Q 014172 228 ---KSRLLILCS 236 (429)
Q Consensus 228 ---~~~~i~l~~ 236 (429)
+...++.+.
T Consensus 87 ~~~~id~vi~~A 98 (260)
T 3awd_A 87 QEGRVDILVACA 98 (260)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 456665443
No 323
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=53.40 E-value=71 Score=28.25 Aligned_cols=97 Identities=13% Similarity=0.003 Sum_probs=51.2
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCCCCHHHHHhhcc----
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLT---- 226 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~---- 226 (429)
....++||.|+...-..+...|.+.|..|++..-.-...... ++..|.++..+..+- -|.+.+++.++
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 94 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDL-----LSRTERDKLMQTVAH 94 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHHHHHHH
Confidence 345677777766555566777788898877654321111221 223366666666543 25666665553
Q ss_pred ---cCCcEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 227 ---EKSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 227 ---~~~~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
.+...++-+....+.+ ...+.++++++.+
T Consensus 95 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 128 (273)
T 1ae1_A 95 VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMG 128 (273)
T ss_dssp HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 2455554333322222 2346667766544
No 324
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=53.24 E-value=34 Score=31.34 Aligned_cols=98 Identities=9% Similarity=0.124 Sum_probs=54.3
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCC-------CC--C------hHHHHHHcCCEEEEecCCCCCCCCCCH
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF-------WV--S------YPEMARIADATPVILPTRISENFLLDP 218 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~-------y~--~------~~~~~~~~g~~~~~v~~~~~~~~~~d~ 218 (429)
....++||.|+...-..+...|.+.|..|++.+-. +. . ....++..|.++..+..+- -|.
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~ 119 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADV-----RDL 119 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT-----TCH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCC-----CCH
Confidence 33456777666655556677788889887765322 11 0 1122334577777777643 266
Q ss_pred HHHHhhccc------CCcEEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 219 KVLESKLTE------KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 219 e~l~~~l~~------~~~~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
+.+++.++. +...++-+......+ ...+.++++++.++
T Consensus 120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~v 165 (317)
T 3oec_A 120 ASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQT 165 (317)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 666665542 455555433333223 24566777766553
No 325
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=52.81 E-value=37 Score=30.38 Aligned_cols=68 Identities=13% Similarity=0.025 Sum_probs=43.0
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
....++||.|+...-..+...|.+.|..|++..-.-..........+.++..+..+- -|.+.+++.++
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~ 71 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDV-----RSLQDQKRAAE 71 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCT-----TCHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCC-----CCHHHHHHHHH
Confidence 345677777776655666777888898888766443334445555666777776543 25666665553
No 326
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=52.52 E-value=52 Score=28.87 Aligned_cols=97 Identities=10% Similarity=0.095 Sum_probs=52.4
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHH---HcCCEEEEecCCCCCCCCCCHHHHHhhccc----
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR---IADATPVILPTRISENFLLDPKVLESKLTE---- 227 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~---~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~---- 227 (429)
...++||.|+...-..+.+.|.+.|..|++..-.-........ ..+.++..+..+- -|.+.+++.++.
T Consensus 6 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 6 EKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDV-----RNTDDIQKMIEQIDEK 80 (257)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 3456666665554455667778889888775533222222222 2355666666543 256666665542
Q ss_pred --CCcEEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 228 --KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 --~~~~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
+...++-+....+.+ ...+.+++++..++
T Consensus 81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 113 (257)
T 3imf_A 81 FGRIDILINNAAGNFICPAEDLSVNGWNSVINI 113 (257)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 455554333322222 23567777776665
No 327
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=52.36 E-value=16 Score=38.79 Aligned_cols=115 Identities=10% Similarity=0.069 Sum_probs=66.2
Q ss_pred CCCCCCcEEEecChHHHHHHHHHHh---cCCCC------EEEEcCCCCCC-------------------hHHHHHHcCCE
Q 014172 151 LSYTPDQILVSNGAKQSILQAVLAV---CSPGD------EVIIPAPFWVS-------------------YPEMARIADAT 202 (429)
Q Consensus 151 ~~~~~~~i~~t~G~~~al~~~l~~l---~~~gd------~Vlv~~p~y~~-------------------~~~~~~~~g~~ 202 (429)
+.++++.|.++.++..+++..++.| +..++ ..+...|.|.- +...+...+.+
T Consensus 264 L~v~~~~i~I~a~~~~G~fyglqTL~QLl~~~~~~~ip~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~Id~mA~~KlN 343 (858)
T 1c7s_A 264 LKIGKKEAQVIGFDQAGVFYGLQSILSLVPSDGSGKIATLDASDAPRFPYRGIFLDVARNFHKKDAVLRLLDQMAAYKLN 343 (858)
T ss_dssp EEECSSCEEEEESSHHHHHHHHHHHHHHSCTTSCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHHHHHTTCC
T ss_pred EEEeCCeEEEEEecccceeHHHHHHHHHhhhcCCccccceEEEeCCCcceeeeeecCCCCCCCHHHHHHHHHHHHHhCCc
Confidence 4456678888888777776666665 33332 23455566541 23444556666
Q ss_pred EEEecCCCCCCCCCCHHHHHhhcccC---------CcEEEEcC-CC--CCccCCCCHHHHHHHHHHHHhCCCeEEEE
Q 014172 203 PVILPTRISENFLLDPKVLESKLTEK---------SRLLILCS-PS--NPTGSVYPKNLLDEIARIVAKHPRLLVLS 267 (429)
Q Consensus 203 ~~~v~~~~~~~~~~d~e~l~~~l~~~---------~~~i~l~~-p~--NPtG~~~~~~~l~~I~~~a~~~~~i~vi~ 267 (429)
+....+..+.+|.+....+.++-+.. ...+ .+. .+ .+.|-.++++++++|++.|+++ +|-||-
T Consensus 344 ~lh~HltDdqgwriei~~yP~Lt~~Ga~r~~~~~~~~~~-~p~~g~~~~~~~g~YT~~direIv~YA~~r-gI~VIP 418 (858)
T 1c7s_A 344 KFHFHLSDDEGWRIEIPGLPELTEVGGQRCHDLSETTCL-LPQYGQGPDVYGGFFSRQDYIDIIKYAQAR-QIEVIP 418 (858)
T ss_dssp EEEEECEETTEECBCCTTCTHHHHTTTEECSCTTCSSSB-CCCTTCCSSCEECCBCHHHHHHHHHHHHTT-TCEEEE
T ss_pred EEEEEeccCccccccccCCchhhhccccccccccccccc-cccccCCCCccCCCCCHHHHHHHHHHHHHc-CCEEEE
Confidence 66666554445555443332221100 0000 000 01 1456789999999999999999 888883
No 328
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=52.35 E-value=39 Score=29.95 Aligned_cols=97 Identities=15% Similarity=0.149 Sum_probs=49.7
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------C
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------K 228 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~ 228 (429)
...+++|.|+...-..+...|.+.|..|++..-.-.......+..+.++..+..+- -|.+.+++.++. +
T Consensus 6 ~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~ 80 (263)
T 2a4k_A 6 GKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADV-----SDPKAVEAVFAEALEEFGR 80 (263)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCT-----TSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCC-----CCHHHHHHHHHHHHHHcCC
Confidence 34677776665555556677778898877654322222233333444555555432 256666665542 4
Q ss_pred CcEEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 229 SRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 229 ~~~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
...++-+......+ ...+.++++++.++
T Consensus 81 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 110 (263)
T 2a4k_A 81 LHGVAHFAGVAHSALSWNLPLEAWEKVLRV 110 (263)
T ss_dssp CCEEEEGGGGTTTTC----CHHHHHHHHHH
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 55555433322222 22455666655543
No 329
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=52.31 E-value=48 Score=29.02 Aligned_cols=94 Identities=12% Similarity=0.086 Sum_probs=48.7
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------
Q 014172 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (429)
Q Consensus 157 ~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------ 227 (429)
.+++|.|+...-..+...|.+.|..|++..-.-..... .++..|.++..+..+- -|.+.+++.+..
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 78 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDV-----SDRDQVFAAVEQARKTLG 78 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHHHHHTT
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHHHHHHHHhC
Confidence 46677665554455667777888887765432111111 2223366666666542 256666665542
Q ss_pred CCcEEEEcCCCCCccC--CCCHHHHHHHHH
Q 014172 228 KSRLLILCSPSNPTGS--VYPKNLLDEIAR 255 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~--~~~~~~l~~I~~ 255 (429)
+...++-+....+.+. ..+.++++++.+
T Consensus 79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 108 (256)
T 1geg_A 79 GFDVIVNNAGVAPSTPIESITPEIVDKVYN 108 (256)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 4555554333222221 245666655544
No 330
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=52.19 E-value=42 Score=29.73 Aligned_cols=100 Identities=8% Similarity=-0.007 Sum_probs=55.8
Q ss_pred CCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCC----hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc
Q 014172 152 SYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS----YPEMARIADATPVILPTRISENFLLDPKVLESKLTE 227 (429)
Q Consensus 152 ~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~ 227 (429)
++....++||.|+...-..+...|.+.|..|++..-.-.. ....++..|.++..+..+. -|.+.+++.++.
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~ 100 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDA-----ASESDFIEAIQT 100 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHHHH
Confidence 3455677787776665566677788889887665432111 1223345577777777643 256666665542
Q ss_pred ------CCcEEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 228 ------KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 ------~~~~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
+...++.+......+ ...+.+++++..++
T Consensus 101 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~ 137 (271)
T 4iin_A 101 IVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDN 137 (271)
T ss_dssp HHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHh
Confidence 455555443332222 23466666666553
No 331
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=52.17 E-value=50 Score=28.66 Aligned_cols=96 Identities=9% Similarity=0.037 Sum_probs=49.2
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEE-EEecCCCCCCCCCCHHHHHhhcc-----c
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATP-VILPTRISENFLLDPKVLESKLT-----E 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~-~~v~~~~~~~~~~d~e~l~~~l~-----~ 227 (429)
....++||.|+...-..+...|.+.|.+|++..-.-.......+..+.++ ..+..+. -|.+.+++.++ .
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 84 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADV-----TDAEAMTAAAAEAEAVA 84 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCT-----TCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEec-----CCHHHHHHHHHHHHhhC
Confidence 34567777666555556677777888877765432222222333334444 4454432 26677766653 2
Q ss_pred CCcEEEEcCCCCCcc--CCCCHHHHHHHH
Q 014172 228 KSRLLILCSPSNPTG--SVYPKNLLDEIA 254 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG--~~~~~~~l~~I~ 254 (429)
+...++-+....+.+ ...+.+++++..
T Consensus 85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~ 113 (254)
T 2wsb_A 85 PVSILVNSAGIARLHDALETDDATWRQVM 113 (254)
T ss_dssp CCCEEEECCCCCCCBCSTTCCHHHHHHHH
T ss_pred CCcEEEECCccCCCCCcccCCHHHHHHHH
Confidence 455555443322222 223555555443
No 332
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=52.09 E-value=58 Score=28.69 Aligned_cols=97 Identities=10% Similarity=0.096 Sum_probs=49.8
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHH---Hc--CCEEEEecCCCCCCCCCCHHHHHhhccc-
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR---IA--DATPVILPTRISENFLLDPKVLESKLTE- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~---~~--g~~~~~v~~~~~~~~~~d~e~l~~~l~~- 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-.......+ .. +.++..+..+- -|.+.+++.++.
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~ 86 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADV-----SDEAQVEAYVTAT 86 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCT-----TSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccC-----CCHHHHHHHHHHH
Confidence 33467777666555556677778889887765432111122211 11 66666666542 256666665542
Q ss_pred -----CCcEEEEcCCCCCc-c--CCCCHHHHHHHHH
Q 014172 228 -----KSRLLILCSPSNPT-G--SVYPKNLLDEIAR 255 (429)
Q Consensus 228 -----~~~~i~l~~p~NPt-G--~~~~~~~l~~I~~ 255 (429)
+...++-+....+. + ...+.++++++.+
T Consensus 87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 122 (267)
T 1iy8_A 87 TERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVS 122 (267)
T ss_dssp HHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHH
Confidence 45555433322211 2 1245666665543
No 333
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=51.84 E-value=68 Score=28.26 Aligned_cols=99 Identities=11% Similarity=0.023 Sum_probs=53.7
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHH---H-cCC-EEEEecCCCCCCCCCCHHHHHhhccc
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR---I-ADA-TPVILPTRISENFLLDPKVLESKLTE 227 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~---~-~g~-~~~~v~~~~~~~~~~d~e~l~~~l~~ 227 (429)
+....++||.|+...-..+...|.+.|..|++..-.-.......+ . .+. ++..+..+- -|.+.+++.++.
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~ 80 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDV-----LDALQVRAFAEA 80 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCT-----TCHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCC-----CCHHHHHHHHHH
Confidence 344567777776665556677788889888776543222222222 1 333 366665542 256666655432
Q ss_pred ------CCcEEEEcCCCCCccC--CCCHHHHHHHHHH
Q 014172 228 ------KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 228 ------~~~~i~l~~p~NPtG~--~~~~~~l~~I~~~ 256 (429)
+...++-+....+.+. ..+.+++++..++
T Consensus 81 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 117 (265)
T 3lf2_A 81 CERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQL 117 (265)
T ss_dssp HHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 4555554433333332 4567777776654
No 334
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=51.46 E-value=23 Score=32.22 Aligned_cols=75 Identities=11% Similarity=0.140 Sum_probs=50.2
Q ss_pred CCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE
Q 014172 187 PFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (429)
Q Consensus 187 p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi 266 (429)
|.|.++.+..+.....++.+-+.++ .-++.++++++.+.+.+++.+. | ++.++.++|.+.|+++ ++.++
T Consensus 51 ~vy~sl~el~~~~~~D~viI~tP~~----~~~~~~~ea~~~Gi~~iVi~t~----G--~~~~~~~~l~~~A~~~-gv~li 119 (288)
T 2nu8_A 51 PVFNTVREAVAATGATASVIYVPAP----FCKDSILEAIDAGIKLIITITE----G--IPTLDMLTVKVKLDEA-GVRMI 119 (288)
T ss_dssp EEESSHHHHHHHHCCCEEEECCCGG----GHHHHHHHHHHTTCSEEEECCC----C--CCHHHHHHHHHHHHHH-TCEEE
T ss_pred eccCCHHHHhhcCCCCEEEEecCHH----HHHHHHHHHHHCCCCEEEEECC----C--CCHHHHHHHHHHHHHc-CCEEE
Confidence 4566677766643555555544332 3577888888888887665333 3 3567788999999999 89888
Q ss_pred EccCCc
Q 014172 267 SDEIYE 272 (429)
Q Consensus 267 ~Deay~ 272 (429)
-..+.+
T Consensus 120 GPNc~G 125 (288)
T 2nu8_A 120 GPNTPG 125 (288)
T ss_dssp CSSCCE
T ss_pred ecCCcc
Confidence 666544
No 335
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=51.40 E-value=1.4e+02 Score=27.02 Aligned_cols=88 Identities=16% Similarity=0.276 Sum_probs=47.3
Q ss_pred cEEEecCh---HHHHHHHHHHhcCCC-CEEEEcCCCCCChH--HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCc
Q 014172 157 QILVSNGA---KQSILQAVLAVCSPG-DEVIIPAPFWVSYP--EMARIADATPVILPTRISENFLLDPKVLESKLTEKSR 230 (429)
Q Consensus 157 ~i~~t~G~---~~al~~~l~~l~~~g-d~Vlv~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~ 230 (429)
-|++..|+ .+++.++-.+ -+-| |-|++..|.|.... ...+ -...+.+.. +.-
T Consensus 71 pviaGvg~~~t~~ai~la~~A-~~~Gadavlv~~P~y~~~s~~~l~~-------------------~f~~ia~a~--~lP 128 (292)
T 2vc6_A 71 PVIAGAGSNSTAEAIAFVRHA-QNAGADGVLIVSPYYNKPTQEGIYQ-------------------HFKAIDAAS--TIP 128 (292)
T ss_dssp CBEEECCCSSHHHHHHHHHHH-HHTTCSEEEEECCCSSCCCHHHHHH-------------------HHHHHHHHC--SSC
T ss_pred cEEEecCCccHHHHHHHHHHH-HHcCCCEEEEcCCCCCCCCHHHHHH-------------------HHHHHHHhC--CCC
Confidence 36766654 5666644333 3345 88999999875311 1110 011222221 234
Q ss_pred EEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccC
Q 014172 231 LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 270 (429)
Q Consensus 231 ~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Dea 270 (429)
+++.+.|. .||..++.+.+.+| ++++|++.=|=|..
T Consensus 129 iilYn~P~-~tg~~l~~~~~~~L---a~~~pnIvgiK~s~ 164 (292)
T 2vc6_A 129 IIVYNIPG-RSAIEIHVETLARI---FEDCPNVKGVXDAT 164 (292)
T ss_dssp EEEEECHH-HHSCCCCHHHHHHH---HHHCTTEEEEEECS
T ss_pred EEEEeCcc-ccCcCCCHHHHHHH---HhhCCCEEEEecCC
Confidence 55556565 38888995555444 44466777776644
No 336
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=51.10 E-value=81 Score=27.22 Aligned_cols=95 Identities=7% Similarity=0.007 Sum_probs=49.5
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChH---HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc---
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--- 227 (429)
....+++|.|+...-..+...|++.|..|++..-.-.... ..++..+.++..+..+. -|.+.+++.++.
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 84 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDI-----TSEQELSALADFAIS 84 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 3456777766555445567778888988776543211111 12223455666665532 266777666542
Q ss_pred ---CCcEEEEcCCCCCcc-CCCCHHHHHHH
Q 014172 228 ---KSRLLILCSPSNPTG-SVYPKNLLDEI 253 (429)
Q Consensus 228 ---~~~~i~l~~p~NPtG-~~~~~~~l~~I 253 (429)
+...++-+......+ ...+.+++++.
T Consensus 85 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~ 114 (255)
T 1fmc_A 85 KLGKVDILVNNAGGGGPKPFDMPMADFRRA 114 (255)
T ss_dssp HHSSCCEEEECCCCCCCCCTTCCHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCCCCCCHHHHHHH
Confidence 566665443322211 23455555543
No 337
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=50.98 E-value=57 Score=28.20 Aligned_cols=96 Identities=8% Similarity=-0.011 Sum_probs=47.7
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcC--CEEEEecCCCCCCCCCCHHHHHhhccc-----
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD--ATPVILPTRISENFLLDPKVLESKLTE----- 227 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g--~~~~~v~~~~~~~~~~d~e~l~~~l~~----- 227 (429)
...+++|.|+...-..+...|.+.|..|++..-.-.......+... .++..+..+. -|.+.+++.++.
T Consensus 6 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 80 (251)
T 1zk4_A 6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDS-----SDEDGWTKLFDATEKAF 80 (251)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCC-----CCHHHHHHHHHHHHHHh
Confidence 3456677665554455667777888777765432111222222221 2344444432 256666665542
Q ss_pred -CCcEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 228 -KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 228 -~~~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
+...++.+....+.+ ...+.+++++..+
T Consensus 81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (251)
T 1zk4_A 81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLA 111 (251)
T ss_dssp SSCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 456665444333323 2345666655544
No 338
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=50.90 E-value=1.2e+02 Score=28.95 Aligned_cols=68 Identities=10% Similarity=0.066 Sum_probs=37.9
Q ss_pred CCCcEEEecChHHHHHHHHHHhcC-CCCEEEEcCCCCCC---------------hHHHHHHcCCEEEEecCCCCCCCCCC
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCS-PGDEVIIPAPFWVS---------------YPEMARIADATPVILPTRISENFLLD 217 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~-~gd~Vlv~~p~y~~---------------~~~~~~~~g~~~~~v~~~~~~~~~~d 217 (429)
....++||.|++.--..+...|.. .|..|++..-.-.. ....++..|.++..+..+- -|
T Consensus 46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dv-----td 120 (405)
T 3zu3_A 46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDA-----FS 120 (405)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCT-----TS
T ss_pred CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCC-----CC
Confidence 345566766665444445566777 78877654221111 1224456788877777643 25
Q ss_pred HHHHHhhcc
Q 014172 218 PKVLESKLT 226 (429)
Q Consensus 218 ~e~l~~~l~ 226 (429)
.+.+++.+.
T Consensus 121 ~~~v~~~v~ 129 (405)
T 3zu3_A 121 DEIKQLTID 129 (405)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666665553
No 339
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=50.87 E-value=71 Score=28.69 Aligned_cols=98 Identities=15% Similarity=0.172 Sum_probs=54.6
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCC----hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc--
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS----YPEMARIADATPVILPTRISENFLLDPKVLESKLTE-- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-- 227 (429)
....++||.|+...-..+.+.|.+.|..|++..-.-.. .....+..|.++..+..+- -|.+.+++.++.
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 120 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDL-----SDEQHCKDIVQETV 120 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCT-----TSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHH
Confidence 34567777776665556677788889887765432221 1223344577777776643 256666665542
Q ss_pred ----CCcEEEEcCCC-CCcc--CCCCHHHHHHHHHH
Q 014172 228 ----KSRLLILCSPS-NPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 ----~~~~i~l~~p~-NPtG--~~~~~~~l~~I~~~ 256 (429)
+...++-+... .+.+ ...+.++++++.++
T Consensus 121 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~v 156 (291)
T 3ijr_A 121 RQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRI 156 (291)
T ss_dssp HHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHH
Confidence 45555433222 1222 12366777777664
No 340
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=50.65 E-value=56 Score=28.39 Aligned_cols=96 Identities=7% Similarity=0.090 Sum_probs=50.3
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCC-CCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc----
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAP-FWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE---- 227 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p-~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~---- 227 (429)
..+++|.|+...-..+...|.+.|..|++..- .-..... .++..|.++..+..+- -|.+.+++.++.
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 79 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADV-----ANAEDVTNMVKQTVDV 79 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 45677766555445566777788988776432 2111111 2223466666666542 266777666542
Q ss_pred --CCcEEEEcCCCCCccC--CCCHHHHHHHHHH
Q 014172 228 --KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 228 --~~~~i~l~~p~NPtG~--~~~~~~l~~I~~~ 256 (429)
+...++-+....+.+. ..+.++++++.++
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (246)
T 2uvd_A 80 FGQVDILVNNAGVTKDNLLMRMKEEEWDTVINT 112 (246)
T ss_dssp HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 4555554333222221 2466666665543
No 341
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=50.36 E-value=55 Score=28.69 Aligned_cols=94 Identities=15% Similarity=0.104 Sum_probs=48.4
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCC--hHHH---HHHcCCEEEEecCCCCCCCCCCHHHHHhhccc----
Q 014172 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS--YPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE---- 227 (429)
Q Consensus 157 ~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~--~~~~---~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~---- 227 (429)
.++||.|+...-..+...|.+.|..|++..-.-.. .... ++..|.++..+..+- -|.+.+++.+..
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 78 (258)
T 3a28_C 4 VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDV-----TDKANFDSAIDEAAEK 78 (258)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 46677665554455666777788877765432222 2222 222366666666543 256666665542
Q ss_pred --CCcEEEEcCCCCCccC--CCCHHHHHHHHH
Q 014172 228 --KSRLLILCSPSNPTGS--VYPKNLLDEIAR 255 (429)
Q Consensus 228 --~~~~i~l~~p~NPtG~--~~~~~~l~~I~~ 255 (429)
+...++-+....+.+. ..+.++++++.+
T Consensus 79 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 110 (258)
T 3a28_C 79 LGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYS 110 (258)
T ss_dssp HTCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 4555544333222221 246666665544
No 342
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=50.00 E-value=1e+02 Score=26.52 Aligned_cols=95 Identities=11% Similarity=0.113 Sum_probs=51.2
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCC-CCChHHH---HHHcCCEEEEecCCCCCCCCCCHHHHHhhccc----
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF-WVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE---- 227 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~-y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~---- 227 (429)
..+++|.|+...-..+...|.+.|.+|++..-. -...... ++..+.++..+..+. -|.+.+++.+..
T Consensus 8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 82 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADL-----ATSEACQQLVDEFVAK 82 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 457777665554555667777888777765433 2232222 233466777776543 267777666542
Q ss_pred --CCcEEEEcCCC-CCccC--CCCHHHHHHHHH
Q 014172 228 --KSRLLILCSPS-NPTGS--VYPKNLLDEIAR 255 (429)
Q Consensus 228 --~~~~i~l~~p~-NPtG~--~~~~~~l~~I~~ 255 (429)
+...++-+... .+.+. ..+.++++++.+
T Consensus 83 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 115 (258)
T 3afn_B 83 FGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMD 115 (258)
T ss_dssp HSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCcCCcCccccCCHHHHHHHHH
Confidence 45666544332 22221 245555655544
No 343
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=49.54 E-value=67 Score=28.19 Aligned_cols=96 Identities=11% Similarity=0.101 Sum_probs=52.3
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEc-CCCCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc----
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIP-APFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE---- 227 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~-~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~---- 227 (429)
..++||.|+...-..+...|.+.|..|++. .-.-..... .++..|.++..+..+- -|.+.+++.++.
T Consensus 5 k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 79 (258)
T 3oid_A 5 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANV-----GQPAKIKEMFQQIDET 79 (258)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 356677666555555667788889887764 332222222 2233466777776643 266666665542
Q ss_pred --CCcEEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 228 --KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 --~~~~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
+...++-+....+.+ ...+.++++++.++
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~v 112 (258)
T 3oid_A 80 FGRLDVFVNNAASGVLRPVMELEETHWDWTMNI 112 (258)
T ss_dssp HSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 455555443322222 23566777666554
No 344
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=49.42 E-value=77 Score=27.72 Aligned_cols=97 Identities=14% Similarity=0.156 Sum_probs=48.3
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHc-----CCEEEEecCCCCCCCCCCHHHHHhhccc-
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA-----DATPVILPTRISENFLLDPKVLESKLTE- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~-----g~~~~~v~~~~~~~~~~d~e~l~~~l~~- 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-.......+.. +.++..+..+- -|.+.+++.++.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~ 80 (260)
T 2z1n_A 6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDI-----REPGDIDRLFEKA 80 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccC-----CCHHHHHHHHHHH
Confidence 3346777766655555566777788988776543211112222211 33555555432 266666666541
Q ss_pred ----CCcEEEEcCCCCCccC--CCCHHHHHHHHH
Q 014172 228 ----KSRLLILCSPSNPTGS--VYPKNLLDEIAR 255 (429)
Q Consensus 228 ----~~~~i~l~~p~NPtG~--~~~~~~l~~I~~ 255 (429)
....++-+....+.+. ..+.+++++..+
T Consensus 81 ~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (260)
T 2z1n_A 81 RDLGGADILVYSTGGPRPGRFMELGVEDWDESYR 114 (260)
T ss_dssp HHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2555554333222221 245666654443
No 345
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=49.26 E-value=57 Score=28.77 Aligned_cols=98 Identities=9% Similarity=0.058 Sum_probs=54.5
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc---
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--- 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-..... .+...|.++..+..+- -|.+.+++.++.
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 84 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDI-----TDDAQVAHLVDETMK 84 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 44567777776655556677788889887776543222222 2334466777776643 256666665542
Q ss_pred ---CCcEEEEcCCC-CCcc--CCCCHHHHHHHHHH
Q 014172 228 ---KSRLLILCSPS-NPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 ---~~~~i~l~~p~-NPtG--~~~~~~~l~~I~~~ 256 (429)
+...++-+... .+.+ ...+.+++++..++
T Consensus 85 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 119 (264)
T 3ucx_A 85 AYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIEL 119 (264)
T ss_dssp HTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHH
Confidence 45555543322 1222 23466677766553
No 346
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=49.00 E-value=70 Score=28.20 Aligned_cols=98 Identities=12% Similarity=0.003 Sum_probs=51.6
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHH---Hc--CCEEEEecCCCCCCCCCCHHHHHhhccc
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR---IA--DATPVILPTRISENFLLDPKVLESKLTE 227 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~---~~--g~~~~~v~~~~~~~~~~d~e~l~~~l~~ 227 (429)
+....++||.|+...-..+...|.+.|..|++..-.-.......+ .. +..+..+..+. -|.+.+++.++.
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~ 82 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADL-----GTEQGCQDVIEK 82 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCT-----TSHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCC-----CCHHHHHHHHHh
Confidence 344567777766555555667788889888776533222222222 11 45666665542 256666666543
Q ss_pred --CCcEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 228 --KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 228 --~~~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
+...++-+......+ ...+.++++++.+
T Consensus 83 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 114 (267)
T 3t4x_A 83 YPKVDILINNLGIFEPVEYFDIPDEDWFKLFE 114 (267)
T ss_dssp CCCCSEEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHH
Confidence 455555433322222 2345666665544
No 347
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=48.93 E-value=69 Score=28.64 Aligned_cols=98 Identities=13% Similarity=0.078 Sum_probs=54.5
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHH---HcCCEEEEecCCCCCCCCCCHHHHHhhccc---
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR---IADATPVILPTRISENFLLDPKVLESKLTE--- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~---~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--- 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-........ ..|.++..+..+- -|.+.+++.+..
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 101 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADV-----SDELQMRNAVRDLVL 101 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHHH
Confidence 34567777776665556677788889888776543222222222 2456777776543 266666665542
Q ss_pred ---CCcEEEEcCCCC-Ccc--CCCCHHHHHHHHHH
Q 014172 228 ---KSRLLILCSPSN-PTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 ---~~~~i~l~~p~N-PtG--~~~~~~~l~~I~~~ 256 (429)
+...++-+.... +.+ ...+.++++++.++
T Consensus 102 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~v 136 (283)
T 3v8b_A 102 KFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAV 136 (283)
T ss_dssp HHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHH
T ss_pred HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHH
Confidence 455555433322 112 24566677766554
No 348
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=48.87 E-value=45 Score=29.07 Aligned_cols=96 Identities=10% Similarity=0.095 Sum_probs=53.1
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCC-CC---hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc----
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFW-VS---YPEMARIADATPVILPTRISENFLLDPKVLESKLTE---- 227 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y-~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~---- 227 (429)
..+++|.|+...-..+...|.+.|..|++..-.- .. ....++..|.++..+..+- -|.+.+++.++.
T Consensus 5 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 79 (246)
T 3osu_A 5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANV-----ADADEVKAMIKEVVSQ 79 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 4567776666555566777888898886643211 11 1223344577777776543 266666665542
Q ss_pred --CCcEEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 228 --KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 --~~~~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
+...++-+....+.+ ...+.++++++.++
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~v 112 (246)
T 3osu_A 80 FGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDT 112 (246)
T ss_dssp HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 455555443332222 23466777766554
No 349
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=48.61 E-value=57 Score=28.99 Aligned_cols=98 Identities=10% Similarity=0.013 Sum_probs=52.5
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc---
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--- 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-..... .++..|.++..+..+- -|.+.+++.++.
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 101 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNV-----NDATAVDALVESTLK 101 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeC-----CCHHHHHHHHHHHHH
Confidence 33456677666555555667788889888766543222222 2333455555555432 256666665542
Q ss_pred ---CCcEEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 228 ---KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 ---~~~~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
+...++-+......+ ...+.++++++.++
T Consensus 102 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 135 (270)
T 3ftp_A 102 EFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDT 135 (270)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 455554433322222 23566777766554
No 350
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=48.47 E-value=58 Score=28.82 Aligned_cols=80 Identities=8% Similarity=-0.017 Sum_probs=43.6
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCCCCHHHHHhhccc--
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE-- 227 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-- 227 (429)
+....++||.|+...-..+...|.+.|..|++..-.-...... ++..|.++..+..+. -|.+.+++.++.
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~ 103 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDC-----SNREDIYSSAKKVK 103 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeC-----CCHHHHHHHHHHHH
Confidence 3445677776665555556677778888877654321112222 223366666666543 256666655532
Q ss_pred ----CCcEEEEcCC
Q 014172 228 ----KSRLLILCSP 237 (429)
Q Consensus 228 ----~~~~i~l~~p 237 (429)
+...++-+..
T Consensus 104 ~~~g~iD~li~~Ag 117 (272)
T 1yb1_A 104 AEIGDVSILVNNAG 117 (272)
T ss_dssp HHTCCCSEEEECCC
T ss_pred HHCCCCcEEEECCC
Confidence 4566554433
No 351
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=48.46 E-value=49 Score=29.24 Aligned_cols=98 Identities=9% Similarity=0.071 Sum_probs=50.9
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHH----HcCCEEEEecCCCCCCCCCCHHHHHhhcc---
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR----IADATPVILPTRISENFLLDPKVLESKLT--- 226 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~e~l~~~l~--- 226 (429)
....++||.|+...-..+...|.+.|..|++..-.-.......+ ..|.++..+..+-. |.+.+++.++
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~ 93 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLA-----EPDAPAELARRAA 93 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT-----STTHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHHHHHH
Confidence 34566777666555555677778889887776543222222221 24667777766432 3344443332
Q ss_pred ---cCCcEEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 227 ---EKSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 227 ---~~~~~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
.+...++-+......+ ...+.+++++..++
T Consensus 94 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 128 (266)
T 4egf_A 94 EAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAV 128 (266)
T ss_dssp HHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 1455555443322222 23466667665543
No 352
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=47.98 E-value=79 Score=28.40 Aligned_cols=98 Identities=15% Similarity=0.142 Sum_probs=55.9
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCC-C----hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV-S----YPEMARIADATPVILPTRISENFLLDPKVLESKLTE- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~-~----~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~- 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-. . .....+..|.++..+..+- -|.+.+++.++.
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~ 122 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDL-----SDESFARSLVHKA 122 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCT-----TSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecC-----CCHHHHHHHHHHH
Confidence 3456777777666556667778889988877543211 1 1223345677787777643 256666655532
Q ss_pred -----CCcEEEEcCCCC-Ccc--CCCCHHHHHHHHHH
Q 014172 228 -----KSRLLILCSPSN-PTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 -----~~~~i~l~~p~N-PtG--~~~~~~~l~~I~~~ 256 (429)
+...++.+.... +.+ ..++.++++++.++
T Consensus 123 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~v 159 (294)
T 3r3s_A 123 REALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAV 159 (294)
T ss_dssp HHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHH
Confidence 455554433321 222 23577777777665
No 353
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=47.97 E-value=74 Score=23.43 Aligned_cols=91 Identities=13% Similarity=0.011 Sum_probs=52.6
Q ss_pred CcEEEecChHHHHHHHHHHhcCCC-CEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEE
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLIL 234 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l 234 (429)
..|+++.++.-+.. ++..+...| ..|.+.+..- .-...+...|...+..+. -+.+.+++.+. +...|+.
T Consensus 6 ~~v~I~G~G~iG~~-~~~~l~~~g~~~v~~~~r~~-~~~~~~~~~~~~~~~~d~-------~~~~~~~~~~~-~~d~vi~ 75 (118)
T 3ic5_A 6 WNICVVGAGKIGQM-IAALLKTSSNYSVTVADHDL-AALAVLNRMGVATKQVDA-------KDEAGLAKALG-GFDAVIS 75 (118)
T ss_dssp EEEEEECCSHHHHH-HHHHHHHCSSEEEEEEESCH-HHHHHHHTTTCEEEECCT-------TCHHHHHHHTT-TCSEEEE
T ss_pred CeEEEECCCHHHHH-HHHHHHhCCCceEEEEeCCH-HHHHHHHhCCCcEEEecC-------CCHHHHHHHHc-CCCEEEE
Confidence 35766655555544 445555667 5666655432 122223345666655443 26677877765 5677776
Q ss_pred cCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE
Q 014172 235 CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (429)
Q Consensus 235 ~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi 266 (429)
+.|.. .-..+.+.|.+. ++..+
T Consensus 76 ~~~~~---------~~~~~~~~~~~~-g~~~~ 97 (118)
T 3ic5_A 76 AAPFF---------LTPIIAKAAKAA-GAHYF 97 (118)
T ss_dssp CSCGG---------GHHHHHHHHHHT-TCEEE
T ss_pred CCCch---------hhHHHHHHHHHh-CCCEE
Confidence 65422 136788888888 77665
No 354
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=47.91 E-value=94 Score=27.14 Aligned_cols=99 Identities=9% Similarity=0.067 Sum_probs=53.8
Q ss_pred CCCCcEEEecCh--HHHHHHHHHHhcCCCCEEEEcCCCCCCh-H----HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhc
Q 014172 153 YTPDQILVSNGA--KQSILQAVLAVCSPGDEVIIPAPFWVSY-P----EMARIADATPVILPTRISENFLLDPKVLESKL 225 (429)
Q Consensus 153 ~~~~~i~~t~G~--~~al~~~l~~l~~~gd~Vlv~~p~y~~~-~----~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l 225 (429)
+....++||.|+ ...-..+...|.+.|..|++..-.-... . ...+..|.++..+..+- -|.+.+++.+
T Consensus 18 l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~v~~~~ 92 (267)
T 3gdg_A 18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQV-----DSYESCEKLV 92 (267)
T ss_dssp CTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCT-----TCHHHHHHHH
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCC-----CCHHHHHHHH
Confidence 344567777665 3433445667778898887764433332 2 22234577777777643 2666666655
Q ss_pred cc------CCcEEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 226 TE------KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 226 ~~------~~~~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
+. +...++-+....+.+ ...+.++++++.++
T Consensus 93 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~ 131 (267)
T 3gdg_A 93 KDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQV 131 (267)
T ss_dssp HHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHH
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHh
Confidence 32 455655443322222 23366666665543
No 355
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=47.90 E-value=52 Score=28.90 Aligned_cols=98 Identities=10% Similarity=0.057 Sum_probs=51.7
Q ss_pred CCCcEEEecCh-HHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHH----cCCEEEEecCCCCCCCCCCHHHHHhhccc-
Q 014172 154 TPDQILVSNGA-KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI----ADATPVILPTRISENFLLDPKVLESKLTE- 227 (429)
Q Consensus 154 ~~~~i~~t~G~-~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~e~l~~~l~~- 227 (429)
....++||.|+ ...-..+...|.+.|..|++..-.-.......+. .+.++..+..+- -|.+.+++.++.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~ 95 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDV-----TSTEAVDALITQT 95 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCC-----CCHHHHHHHHHHH
Confidence 44567777774 4333445667778898877765332222222222 234666666543 256666665542
Q ss_pred -----CCcEEEEcCCCCCccC--CCCHHHHHHHHHH
Q 014172 228 -----KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 228 -----~~~~i~l~~p~NPtG~--~~~~~~l~~I~~~ 256 (429)
+...++.+....+.+. ..+.+++++..++
T Consensus 96 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 131 (266)
T 3o38_A 96 VEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNV 131 (266)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 4555554433322222 3466677666554
No 356
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=47.89 E-value=37 Score=30.76 Aligned_cols=48 Identities=8% Similarity=0.045 Sum_probs=32.4
Q ss_pred hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEc
Q 014172 192 YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 268 (429)
Q Consensus 192 ~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~D 268 (429)
....++..|++.+++|+.....|.. .+.+.++++++.|.++ |+.||.|
T Consensus 37 ~~~~lk~~G~N~VRi~~~~~~~w~~----------------------------~~~~~ld~~v~~a~~~-Gi~Vild 84 (302)
T 1bqc_A 37 AFADIKSHGANTVRVVLSNGVRWSK----------------------------NGPSDVANVISLCKQN-RLICMLE 84 (302)
T ss_dssp HHHHHHHTTCSEEEEEECCSSSSCC----------------------------CCHHHHHHHHHHHHHT-TCEEEEE
T ss_pred HHHHHHHcCCCEEEEEccCCcccCC----------------------------CCHHHHHHHHHHHHHC-CCEEEEE
Confidence 4556667888888888753211110 0356788888888888 8888887
No 357
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=47.76 E-value=57 Score=29.39 Aligned_cols=97 Identities=7% Similarity=-0.024 Sum_probs=49.6
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc--
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE-- 227 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-- 227 (429)
+....++||.|+...-..+...|.+.|..|++..-.-..... .++..|.++..+..+- -|.+.++++++.
T Consensus 32 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 106 (291)
T 3cxt_A 32 LKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDV-----TDEDGIQAMVAQIE 106 (291)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecC-----CCHHHHHHHHHHHH
Confidence 344567777766555556677778889887765432111111 1223355555555432 256666665542
Q ss_pred ----CCcEEEEcCCCCCcc--CCCCHHHHHHHH
Q 014172 228 ----KSRLLILCSPSNPTG--SVYPKNLLDEIA 254 (429)
Q Consensus 228 ----~~~~i~l~~p~NPtG--~~~~~~~l~~I~ 254 (429)
+...++-+....+.+ ...+.++++++.
T Consensus 107 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~ 139 (291)
T 3cxt_A 107 SEVGIIDILVNNAGIIRRVPMIEMTAAQFRQVI 139 (291)
T ss_dssp HHTCCCCEEEECCCCCCCCCGGGSCHHHHHHHH
T ss_pred HHcCCCcEEEECCCcCCCCCcccCCHHHHHHHH
Confidence 355554333222222 124666666554
No 358
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=47.70 E-value=71 Score=27.46 Aligned_cols=97 Identities=12% Similarity=0.047 Sum_probs=50.1
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHH---H-cCCEEEEecCCCCCCCCCCHHHHHhhccc--
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR---I-ADATPVILPTRISENFLLDPKVLESKLTE-- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~---~-~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-- 227 (429)
....+++|.|+...-..+...|.+.|..|++..-.-.......+ . .+.++..+..+. -|.+.++++++.
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~ 80 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNL-----LSEESINKAFEEIY 80 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccC-----CCHHHHHHHHHHHH
Confidence 33456777665554455667777888887765432111111111 1 366666666532 266777666542
Q ss_pred ----CCcEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 228 ----KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 228 ----~~~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
+...++-+....+.+ ...+.+++++..+
T Consensus 81 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (248)
T 2pnf_A 81 NLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLK 114 (248)
T ss_dssp HHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HhcCCCCEEEECCCCCCCCccccCCHHHHHHHHh
Confidence 556665443322222 1245555655444
No 359
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=47.49 E-value=1.1e+02 Score=26.05 Aligned_cols=94 Identities=18% Similarity=0.086 Sum_probs=49.6
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHH-cCCEEEEecCCCCCCCCCCHHHHHhhccc--CCc
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI-ADATPVILPTRISENFLLDPKVLESKLTE--KSR 230 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--~~~ 230 (429)
....+++|.|+...-..+...|.+.|..|++..-.-.......+. .+.+++..++ -|.+.+++.++. +..
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~-------~~~~~~~~~~~~~~~id 78 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDL-------GDWDATEKALGGIGPVD 78 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCT-------TCHHHHHHHHTTCCCCS
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecC-------CCHHHHHHHHHHcCCCC
Confidence 345677887665555566777778888877654322222222222 3566554333 267788877763 345
Q ss_pred EEEEcCCCCCcc--CCCCHHHHHHHH
Q 014172 231 LLILCSPSNPTG--SVYPKNLLDEIA 254 (429)
Q Consensus 231 ~i~l~~p~NPtG--~~~~~~~l~~I~ 254 (429)
.++-+......+ ...+.+++++..
T Consensus 79 ~vi~~Ag~~~~~~~~~~~~~~~~~~~ 104 (244)
T 1cyd_A 79 LLVNNAALVIMQPFLEVTKEAFDRSF 104 (244)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHH
T ss_pred EEEECCcccCCCCcccCCHHHHHHHH
Confidence 555433322222 123555555443
No 360
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=47.20 E-value=1.1e+02 Score=26.20 Aligned_cols=74 Identities=20% Similarity=0.184 Sum_probs=41.1
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHH-cCCEEEEecCCCCCCCCCCHHHHHhhccc--CCc
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI-ADATPVILPTRISENFLLDPKVLESKLTE--KSR 230 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--~~~ 230 (429)
....+++|.|+...-..+...|.+.|..|++..-.-.......+. .+.+++..++ -|.+.+++.++. +..
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~-------~~~~~~~~~~~~~~~id 78 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDL-------GDWEATERALGSVGPVD 78 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCT-------TCHHHHHHHHTTCCCCC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeC-------CCHHHHHHHHHHcCCCC
Confidence 345677777665555556677778888877654321112222222 2555554333 267788877763 345
Q ss_pred EEEE
Q 014172 231 LLIL 234 (429)
Q Consensus 231 ~i~l 234 (429)
.++-
T Consensus 79 ~vi~ 82 (244)
T 3d3w_A 79 LLVN 82 (244)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5543
No 361
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=46.79 E-value=49 Score=28.61 Aligned_cols=75 Identities=13% Similarity=0.097 Sum_probs=39.6
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHH----cCCEEEEecCCCCCCCCCCHHHHHhhccc-----
Q 014172 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI----ADATPVILPTRISENFLLDPKVLESKLTE----- 227 (429)
Q Consensus 157 ~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~e~l~~~l~~----- 227 (429)
.+++|.|+...-..+...|.+.|..|++..-.-.......+. .+.++..+..+. -|.+.+++.++.
T Consensus 4 ~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 78 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV-----ADEGDVNAAIAATMEQF 78 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHHHHHHHHh
Confidence 466776655544556667777887777654322222222222 244555555432 266777666542
Q ss_pred -CCcEEEEcC
Q 014172 228 -KSRLLILCS 236 (429)
Q Consensus 228 -~~~~i~l~~ 236 (429)
+...++-+.
T Consensus 79 ~~id~li~~A 88 (250)
T 2cfc_A 79 GAIDVLVNNA 88 (250)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 455655443
No 362
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=46.57 E-value=83 Score=28.08 Aligned_cols=98 Identities=12% Similarity=0.037 Sum_probs=53.2
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHH---HcCCEEEEecCCCCCCCCCCHHHHHhhccc---
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR---IADATPVILPTRISENFLLDPKVLESKLTE--- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~---~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--- 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-.......+ ..|.++..+..+- -|.+.+++.+..
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 81 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDV-----GDEALHEALVELAVR 81 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHHH
Confidence 33456777666555555667788889888876543222222222 2366777776543 256666665542
Q ss_pred ---CCcEEEEcCCCC-CccC--CCCHHHHHHHHHH
Q 014172 228 ---KSRLLILCSPSN-PTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 228 ---~~~~i~l~~p~N-PtG~--~~~~~~l~~I~~~ 256 (429)
+...++-+.... +.+. ..+.++++++.++
T Consensus 82 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~v 116 (280)
T 3tox_A 82 RFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDT 116 (280)
T ss_dssp HHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHH
Confidence 455554333211 2221 3466777666543
No 363
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=46.55 E-value=75 Score=28.42 Aligned_cols=95 Identities=13% Similarity=0.154 Sum_probs=49.4
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHH----cCCEEEEecCCCCCCCCCCHHHHHhhccc----
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI----ADATPVILPTRISENFLLDPKVLESKLTE---- 227 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~e~l~~~l~~---- 227 (429)
..+++|.|+...-..+...|.+.|..|++..-.-.......+. .+.++..+..+- -|.+.+++++..
T Consensus 27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~ 101 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDV-----RDPDMVQNTVSELIKV 101 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCC-----CCHHHHHHHHHHHHHH
Confidence 4577776665555556677788888877654322222222221 166666666542 266666665532
Q ss_pred --CCcEEEEcCCCCCccC--CCCHHHHHHHHH
Q 014172 228 --KSRLLILCSPSNPTGS--VYPKNLLDEIAR 255 (429)
Q Consensus 228 --~~~~i~l~~p~NPtG~--~~~~~~l~~I~~ 255 (429)
+...++-+......+. ..+.+++++..+
T Consensus 102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 133 (302)
T 1w6u_A 102 AGHPNIVINNAAGNFISPTERLSPNAWKTITD 133 (302)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHH
Confidence 4455554333222221 345565655443
No 364
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=46.37 E-value=39 Score=31.50 Aligned_cols=76 Identities=8% Similarity=0.153 Sum_probs=49.6
Q ss_pred CCCCCChHHHHHHc-CCEEEEecCCCCCCCCCCHHHHHhhcc-cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCe
Q 014172 186 APFWVSYPEMARIA-DATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL 263 (429)
Q Consensus 186 ~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~e~l~~~l~-~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i 263 (429)
-|.|.+..++.... ++.+..+-+.+. .-.+.+.+++. ...+.+++.+-.- +.++.++|.++|+++ ++
T Consensus 64 vpvy~sv~ea~~~~p~~DlaVi~vp~~----~a~~ai~ea~~~~Gv~~vViiT~G~------~e~~~~~l~~~a~~~-g~ 132 (334)
T 3mwd_B 64 IPVFKNMADAMRKHPEVDVLINFASLR----SAYDSTMETMNYAQIRTIAIIAEGI------PEALTRKLIKKADQK-GV 132 (334)
T ss_dssp EEEESSHHHHHHHCTTCCEEEECCCTT----THHHHHHHHTTSTTCCEEEECCSCC------CHHHHHHHHHHHHHH-TC
T ss_pred ceeeCCHHHHhhcCCCCcEEEEecCHH----HHHHHHHHHHHHCCCCEEEEECCCC------CHHHHHHHHHHHHHc-CC
Confidence 47788888876654 355544433221 13467667776 6788877644332 446788999999999 99
Q ss_pred EEEEccCCc
Q 014172 264 LVLSDEIYE 272 (429)
Q Consensus 264 ~vi~Deay~ 272 (429)
.||==.+.+
T Consensus 133 rliGPNc~G 141 (334)
T 3mwd_B 133 TIIGPATVG 141 (334)
T ss_dssp EEECSSCCC
T ss_pred EEEccCCcc
Confidence 998544443
No 365
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=46.19 E-value=83 Score=27.94 Aligned_cols=96 Identities=13% Similarity=0.090 Sum_probs=49.3
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHH---cCCEEEEecCCCCCCCCCCHHHHHhhccc---
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI---ADATPVILPTRISENFLLDPKVLESKLTE--- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--- 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-.......+. .| ++..+..+- -|.+.++++++.
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv-----~d~~~v~~~~~~~~~ 101 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADL-----SSEAGARRLAQALGE 101 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCT-----TSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeC-----CCHHHHHHHHHHHHH
Confidence 344677776665555556677778898877765322222222222 23 555555532 256666665542
Q ss_pred ---CCcEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 228 ---KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 228 ---~~~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
+...++-+......+ ...+.++++++.+
T Consensus 102 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 134 (276)
T 2b4q_A 102 LSARLDILVNNAGTSWGAALESYPVSGWEKVMQ 134 (276)
T ss_dssp HCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 455555433322222 1245566665544
No 366
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=45.73 E-value=66 Score=28.29 Aligned_cols=97 Identities=10% Similarity=0.061 Sum_probs=52.1
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHH---HHcC-CEEEEecCCCCCCCCCCHHHHHhhccc--
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA---RIAD-ATPVILPTRISENFLLDPKVLESKLTE-- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~---~~~g-~~~~~v~~~~~~~~~~d~e~l~~~l~~-- 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-....... +..+ .++..+..+- -|.+.+++.++.
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 83 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDV-----SDRAQCDALAGRAV 83 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 4456777776665555667778888988777653322222222 2223 4566665542 256666655532
Q ss_pred ----CCcEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 228 ----KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 228 ----~~~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
+...++-+....+.+ ...+.++++++.+
T Consensus 84 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 117 (262)
T 3pk0_A 84 EEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFA 117 (262)
T ss_dssp HHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 456655443333222 2346677766654
No 367
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=45.69 E-value=85 Score=27.50 Aligned_cols=97 Identities=10% Similarity=0.095 Sum_probs=50.8
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCCCCHHHHHhhccc---
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--- 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-...... ++..|.++..+..+- -|.+.+++.++.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 80 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDV-----TSEEAVIGTVDSVVR 80 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHHHHHHH
Confidence 334677777666555566777888898777654221111122 222366666666543 256666655532
Q ss_pred ---CCcEEEEcCCCC-Ccc--CCCCHHHHHHHHH
Q 014172 228 ---KSRLLILCSPSN-PTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 228 ---~~~~i~l~~p~N-PtG--~~~~~~~l~~I~~ 255 (429)
+...++-+.... +.+ ...+.++++++.+
T Consensus 81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 114 (262)
T 1zem_A 81 DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLT 114 (262)
T ss_dssp HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HhCCCCEEEECCCCCCCCCccccCCHHHHHHHHH
Confidence 455555433222 222 1346666766554
No 368
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=45.65 E-value=1.4e+02 Score=25.91 Aligned_cols=93 Identities=14% Similarity=0.040 Sum_probs=47.7
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------C
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------K 228 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~ 228 (429)
...+++|.|+...-..+...|.+.|..|++..-.-.. ....+..+...+..++ -|.+.+++.++. +
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~D~-------~~~~~~~~~~~~~~~~~g~ 77 (256)
T 2d1y_A 6 GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGGAFFQVDL-------EDERERVRFVEEAAYALGR 77 (256)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTCEEEECCT-------TCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhCCEEEeeC-------CCHHHHHHHHHHHHHHcCC
Confidence 3467777666655556677788889887765433222 3333333323333332 256666655532 4
Q ss_pred CcEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 229 SRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 229 ~~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
...++-+....+.+ ...+.++++++.+
T Consensus 78 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 106 (256)
T 2d1y_A 78 VDVLVNNAAIAAPGSALTVRLPEWRRVLE 106 (256)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 55555433322222 2345666665544
No 369
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=44.75 E-value=63 Score=32.55 Aligned_cols=24 Identities=29% Similarity=0.423 Sum_probs=22.2
Q ss_pred cCCCCHHHHHHHHHHHHhCCCeEEE
Q 014172 242 GSVYPKNLLDEIARIVAKHPRLLVL 266 (429)
Q Consensus 242 G~~~~~~~l~~I~~~a~~~~~i~vi 266 (429)
|..++++++++|++.|+++ +|-||
T Consensus 250 ~~~YT~~di~eiv~yA~~r-gI~VI 273 (572)
T 3ozo_A 250 QKVYTKAAIREVVRFGLER-GVRVL 273 (572)
T ss_dssp SSCBCHHHHHHHHHHHHHT-TCEEE
T ss_pred CCCcCHHHHHHHHHHHHHh-CCcee
Confidence 5689999999999999999 88888
No 370
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=44.39 E-value=1.1e+02 Score=27.84 Aligned_cols=78 Identities=9% Similarity=0.173 Sum_probs=49.9
Q ss_pred CCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEE
Q 014172 186 APFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLV 265 (429)
Q Consensus 186 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~v 265 (429)
-|.|.+..+..+..+..+..+-+.++ .-++.++++++...+.+++-++ |. +.++.+++.+.|+++.++.+
T Consensus 57 ~~vy~sl~el~~~~~vD~avI~vP~~----~~~~~~~e~i~~Gi~~iv~~t~----G~--~~~~~~~l~~~a~~~~gi~l 126 (305)
T 2fp4_A 57 LPVFNTVKEAKEQTGATASVIYVPPP----FAAAAINEAIDAEVPLVVCITE----GI--PQQDMVRVKHRLLRQGKTRL 126 (305)
T ss_dssp EEEESSHHHHHHHHCCCEEEECCCHH----HHHHHHHHHHHTTCSEEEECCC----CC--CHHHHHHHHHHHTTCSSCEE
T ss_pred eeeechHHHhhhcCCCCEEEEecCHH----HHHHHHHHHHHCCCCEEEEECC----CC--ChHHHHHHHHHHHhcCCcEE
Confidence 34455666666644555555544332 2467777777778888766555 32 44556789999988636888
Q ss_pred EEccCCcc
Q 014172 266 LSDEIYEH 273 (429)
Q Consensus 266 i~Deay~~ 273 (429)
|-+.+.+.
T Consensus 127 iGPnc~Gi 134 (305)
T 2fp4_A 127 IGPNCPGV 134 (305)
T ss_dssp ECSSSCEE
T ss_pred EeCCCCeE
Confidence 87776654
No 371
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=44.39 E-value=91 Score=27.18 Aligned_cols=97 Identities=13% Similarity=-0.077 Sum_probs=48.8
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCCCCHHHHHhhcc----
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLT---- 226 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~---- 226 (429)
....++||.|+...-..+...|++.|..|++..-.-...... ++..|.++..+..+. -|.+.+++.++
T Consensus 13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 87 (266)
T 1xq1_A 13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDA-----SLRPEREKLMQTVSS 87 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCC-----CCHHHHHHHHHHHHH
Confidence 334577776655544556677788888777654321111111 222355666665532 25666666553
Q ss_pred ---cCCcEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 227 ---EKSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 227 ---~~~~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
.+...++-+....+.+ ...+.+++++..+
T Consensus 88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 121 (266)
T 1xq1_A 88 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHIS 121 (266)
T ss_dssp HHTTCCSEEEEECCC------CCCCHHHHHHHHH
T ss_pred HhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 3556665443322222 2245666654443
No 372
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=43.96 E-value=58 Score=28.94 Aligned_cols=96 Identities=6% Similarity=0.049 Sum_probs=48.1
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHH---HcCC---EEEEecCCCCCCCCCCHHHHHhhccc-
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR---IADA---TPVILPTRISENFLLDPKVLESKLTE- 227 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~---~~g~---~~~~v~~~~~~~~~~d~e~l~~~l~~- 227 (429)
...++||.|+...-..+...|.+.|..|++..-.-.......+ ..|. ++..+..+- -|.+.+++.++.
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~ 80 (280)
T 1xkq_A 6 NKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADV-----TTEDGQDQIINST 80 (280)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCT-----TSHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecC-----CCHHHHHHHHHHH
Confidence 3456777666555555667778889887765432111222222 2233 455555432 256666665542
Q ss_pred -----CCcEEEEcCCCCCcc------CCCCHHHHHHHHH
Q 014172 228 -----KSRLLILCSPSNPTG------SVYPKNLLDEIAR 255 (429)
Q Consensus 228 -----~~~~i~l~~p~NPtG------~~~~~~~l~~I~~ 255 (429)
+...++-+......+ ...+.++++++.+
T Consensus 81 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 119 (280)
T 1xkq_A 81 LKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLK 119 (280)
T ss_dssp HHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHH
T ss_pred HHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHH
Confidence 455555433222222 1345566655544
No 373
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=43.92 E-value=87 Score=28.00 Aligned_cols=97 Identities=12% Similarity=0.085 Sum_probs=50.0
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHH---H-----cCCEEEEecCCCCCCCCCCHHHHHhhc
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR---I-----ADATPVILPTRISENFLLDPKVLESKL 225 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~---~-----~g~~~~~v~~~~~~~~~~d~e~l~~~l 225 (429)
....++||.|+...-..+...|.+.|..|++..-.-.......+ . .+.++..+..+- -|.+.+++.+
T Consensus 17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~ 91 (303)
T 1yxm_A 17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNI-----RNEEEVNNLV 91 (303)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCT-----TCHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCC-----CCHHHHHHHH
Confidence 33467777666555555667777888877765432111111111 1 355666666542 2667776665
Q ss_pred cc------CCcEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 226 TE------KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 226 ~~------~~~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
+. +...|+-+......+ ...+.+++++..+
T Consensus 92 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 129 (303)
T 1yxm_A 92 KSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLE 129 (303)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 43 456655433322222 2245555655443
No 374
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=43.90 E-value=43 Score=33.69 Aligned_cols=98 Identities=12% Similarity=0.103 Sum_probs=58.0
Q ss_pred cEEEecChHHHHHHHHHHh---------cCCCCEEEEcCCCCCChH-------HHHHHcCCEEEEecCCC-CCCCCCCHH
Q 014172 157 QILVSNGAKQSILQAVLAV---------CSPGDEVIIPAPFWVSYP-------EMARIADATPVILPTRI-SENFLLDPK 219 (429)
Q Consensus 157 ~i~~t~G~~~al~~~l~~l---------~~~gd~Vlv~~p~y~~~~-------~~~~~~g~~~~~v~~~~-~~~~~~d~e 219 (429)
-|++++|+..--..++.-+ ++++|.|++....+++.. ......|++++...... .-..-.|.+
T Consensus 308 ~vi~~tg~~ge~~~~l~ria~~~h~~~~~~~~~~vi~s~~~~~G~~~~~~~~~~~l~~~g~~v~~~~~~~i~~SgHa~~~ 387 (562)
T 3bk2_A 308 VLILATGSQGQPMSVLHRLAFEGHAKMAIKPGDTVILSSSPIPGNEEAVNRVINRLYALGAYVLYPPTYKVHASGHASQE 387 (562)
T ss_dssp EEEEECCTTSCSHHHHHHHHTTCCSSCCCCTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECTTTSSSCCCSSCCHH
T ss_pred EEEEEcCCCchhHHHHHhhhhcccccccCCCCCEEEEECCCCCCCeEehhhhcCceeeCCCEEEEccCCceEEeCCCCHH
Confidence 3677777632212222222 378999999988777753 33456788887543100 011124888
Q ss_pred HHHhhccc-CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCe
Q 014172 220 VLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL 263 (429)
Q Consensus 220 ~l~~~l~~-~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i 263 (429)
+|...++. +++-++..+.. ...+.+.++++++. ++
T Consensus 388 eL~~~i~~~~Pk~vipvHGe--------~~~~~~~~~~~~~~-g~ 423 (562)
T 3bk2_A 388 ELKLILNLTTPRFFLPWHGE--------VRHQMNFKWLAESM-SR 423 (562)
T ss_dssp HHHHHHHHHCCSEEEEESBC--------HHHHHHHHHHHHTS-SS
T ss_pred HHHHHHHhcCCCEEEEEcCC--------HHHHHHHHHHHHHc-CC
Confidence 88877653 67777765542 23467778888776 54
No 375
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=43.86 E-value=31 Score=30.32 Aligned_cols=94 Identities=14% Similarity=0.153 Sum_probs=52.0
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-----C
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-----K 228 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-----~ 228 (429)
....++||.|+...-..+.+.|.+.|..|++..- ......+..+.++..+..+- -|.+.+++.++. +
T Consensus 8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r---~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~g~ 79 (257)
T 3tl3_A 8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDI---RGEDVVADLGDRARFAAADV-----TDEAAVASALDLAETMGT 79 (257)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEES---SCHHHHHHTCTTEEEEECCT-----TCHHHHHHHHHHHHHHSC
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC---chHHHHHhcCCceEEEECCC-----CCHHHHHHHHHHHHHhCC
Confidence 3345677766655555566777888887776543 33445556677777776643 256666655531 3
Q ss_pred CcEEEEcCCC-CCccC------CCCHHHHHHHHHH
Q 014172 229 SRLLILCSPS-NPTGS------VYPKNLLDEIARI 256 (429)
Q Consensus 229 ~~~i~l~~p~-NPtG~------~~~~~~l~~I~~~ 256 (429)
...+ +++.. ...+. ..+.++++++.++
T Consensus 80 id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~~~~v 113 (257)
T 3tl3_A 80 LRIV-VNCAGTGNAIRVLSRDGVFSLAAFRKIVDI 113 (257)
T ss_dssp EEEE-EECGGGSHHHHHHHHTCCCSHHHHHHHHHH
T ss_pred CCEE-EECCCCCCCcccccccccCCHHHHHHHHHH
Confidence 4444 33331 11111 2677777777664
No 376
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=43.29 E-value=61 Score=29.24 Aligned_cols=96 Identities=11% Similarity=0.093 Sum_probs=48.7
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH---HHHcCC---EEEEecCCCCCCCCCCHHHHHhhccc
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADA---TPVILPTRISENFLLDPKVLESKLTE 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~---~~~~g~---~~~~v~~~~~~~~~~d~e~l~~~l~~ 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-...... +...|. ++..+..+- -|.+.+++++..
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~ 99 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADV-----TEASGQDDIINT 99 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCT-----TSHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCC-----CCHHHHHHHHHH
Confidence 334577776665555566777788898877654321111121 222344 555555432 256666665542
Q ss_pred ------CCcEEEEcCCCCCccC----CCCHHHHHHHH
Q 014172 228 ------KSRLLILCSPSNPTGS----VYPKNLLDEIA 254 (429)
Q Consensus 228 ------~~~~i~l~~p~NPtG~----~~~~~~l~~I~ 254 (429)
+...++-+......+. ..+.++++++.
T Consensus 100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~ 136 (297)
T 1xhl_A 100 TLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTF 136 (297)
T ss_dssp HHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHH
T ss_pred HHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHH
Confidence 4555554333222222 34556665543
No 377
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=43.13 E-value=1e+02 Score=27.06 Aligned_cols=76 Identities=8% Similarity=0.003 Sum_probs=40.1
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCC--EEEEecCCCCCCCCCCHHHHHhhccc-----
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA--TPVILPTRISENFLLDPKVLESKLTE----- 227 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~--~~~~v~~~~~~~~~~d~e~l~~~l~~----- 227 (429)
...++||.|+...-..+...|.+.|..|++..-.-..........+. ++..+..+. -|.+.+++.++.
T Consensus 16 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 90 (278)
T 2bgk_A 16 DKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDV-----TKDEDVRNLVDTTIAKH 90 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCC-----CCHHHHHHHHHHHHHHc
Confidence 34677777666555566777788888877654321111222222221 344454432 266777666542
Q ss_pred -CCcEEEEc
Q 014172 228 -KSRLLILC 235 (429)
Q Consensus 228 -~~~~i~l~ 235 (429)
+...++-+
T Consensus 91 ~~id~li~~ 99 (278)
T 2bgk_A 91 GKLDIMFGN 99 (278)
T ss_dssp SCCCEEEEC
T ss_pred CCCCEEEEC
Confidence 45555533
No 378
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=42.45 E-value=99 Score=26.44 Aligned_cols=94 Identities=11% Similarity=0.078 Sum_probs=48.6
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCEEEE-cCCCCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-----
Q 014172 157 QILVSNGAKQSILQAVLAVCSPGDEVII-PAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE----- 227 (429)
Q Consensus 157 ~i~~t~G~~~al~~~l~~l~~~gd~Vlv-~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~----- 227 (429)
.+++|.|+...-..+...|.+.|..|++ ..-.-..... .++..+.++..+..+- -|.+.+++.++.
T Consensus 3 ~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 77 (244)
T 1edo_A 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDV-----SKEADVEAMMKTAIDAW 77 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCT-----TSHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCC-----CCHHHHHHHHHHHHHHc
Confidence 3566665554445566777788888776 3322111111 2233466777766543 266777666542
Q ss_pred -CCcEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 228 -KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 228 -~~~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
+...++-+......+ ...+.+++++..+
T Consensus 78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (244)
T 1edo_A 78 GTIDVVVNNAGITRDTLLIRMKKSQWDEVID 108 (244)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCcCcccCCHHHHHHHHH
Confidence 456665443322222 1245566655544
No 379
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=42.38 E-value=52 Score=29.13 Aligned_cols=66 Identities=8% Similarity=0.054 Sum_probs=34.3
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHH------cCCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI------ADATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~------~g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
..++||.|+...-..+...|.+.|..|++..-.-.......+. .+.++..+..+- -|.+.+++.+.
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~ 78 (278)
T 1spx_A 7 KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADV-----TTDAGQDEILS 78 (278)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCT-----TSHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEeccc-----CCHHHHHHHHH
Confidence 4566666655544556667778898877654321111222221 133455555432 25666666554
No 380
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=42.15 E-value=52 Score=28.78 Aligned_cols=97 Identities=12% Similarity=0.187 Sum_probs=48.8
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHH---c--C-CEEEEecCCCCCCCCCCHHHHHhhccc
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI---A--D-ATPVILPTRISENFLLDPKVLESKLTE 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~---~--g-~~~~~v~~~~~~~~~~d~e~l~~~l~~ 227 (429)
....+++|.|+...-..+...|.+.|..|++..-.-.......+. . + .++..+..+- -|.+.+++.+..
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~ 80 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDI-----TDCTKADTEIKD 80 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCT-----TCHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccC-----CCHHHHHHHHHH
Confidence 334567776665555556677778888887765432222222221 1 2 4455555432 256666665542
Q ss_pred ------CCcEEEEcCCCCCcc-CCCCHHHHHHHHH
Q 014172 228 ------KSRLLILCSPSNPTG-SVYPKNLLDEIAR 255 (429)
Q Consensus 228 ------~~~~i~l~~p~NPtG-~~~~~~~l~~I~~ 255 (429)
+...++-+......+ ...+.+++++..+
T Consensus 81 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~ 115 (250)
T 3nyw_A 81 IHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIME 115 (250)
T ss_dssp HHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHH
T ss_pred HHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHH
Confidence 344444333322222 2345556665544
No 381
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=42.07 E-value=1.2e+02 Score=26.34 Aligned_cols=66 Identities=14% Similarity=0.157 Sum_probs=36.2
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHH----HHcCCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
..++||.|+...-..+...|.+.|..|++..-.-....... ...+.++..+..+- -|.+.+++.++
T Consensus 15 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~~~~~~~ 84 (265)
T 1h5q_A 15 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDV-----SNTDIVTKTIQ 84 (265)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCT-----TCHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeC-----CCHHHHHHHHH
Confidence 45777766555455566777788877766543222222222 22366666666542 25666666553
No 382
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=41.97 E-value=60 Score=29.17 Aligned_cols=97 Identities=8% Similarity=0.136 Sum_probs=49.3
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCC---EEEEcCCCCCChHHHHHH-----cCCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGD---EVIIPAPFWVSYPEMARI-----ADATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd---~Vlv~~p~y~~~~~~~~~-----~g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
...++||.|+...-..+...|.+.|. .|++..-.-.......+. .|.++..+..+-. |.+.+++.++
T Consensus 33 ~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~ 107 (287)
T 3rku_A 33 KKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDIT-----QAEKIKPFIE 107 (287)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTT-----CGGGHHHHHH
T ss_pred CCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCC-----CHHHHHHHHH
Confidence 34567776665544555666766665 666654332222222222 2677777776532 4555555443
Q ss_pred c------CCcEEEEcCCCC-Ccc--CCCCHHHHHHHHHH
Q 014172 227 E------KSRLLILCSPSN-PTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 227 ~------~~~~i~l~~p~N-PtG--~~~~~~~l~~I~~~ 256 (429)
. +...++-+.... +.+ ..++.++++++.++
T Consensus 108 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~v 146 (287)
T 3rku_A 108 NLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDT 146 (287)
T ss_dssp TSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred HHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHH
Confidence 2 345544333222 122 23467777766554
No 383
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=41.66 E-value=1.1e+02 Score=25.79 Aligned_cols=93 Identities=11% Similarity=0.025 Sum_probs=50.4
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCC-HHHHHhhcccCCcEEEEc
Q 014172 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLD-PKVLESKLTEKSRLLILC 235 (429)
Q Consensus 157 ~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d-~e~l~~~l~~~~~~i~l~ 235 (429)
.|++|.|+...-..++..|++.|..|++..-.-.... ...+++++..++ -| .+.+.+++. +..+|+.+
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~---~~~~~~~~~~D~-------~d~~~~~~~~~~-~~d~vi~~ 70 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVP---QYNNVKAVHFDV-------DWTPEEMAKQLH-GMDAIINV 70 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSC---CCTTEEEEECCT-------TSCHHHHHTTTT-TCSEEEEC
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchh---hcCCceEEEecc-------cCCHHHHHHHHc-CCCEEEEC
Confidence 3677765544445567778888877665542211110 013444444433 25 888888876 46666654
Q ss_pred CCCC-CccCCCCHHHHHHHHHHHHhC
Q 014172 236 SPSN-PTGSVYPKNLLDEIARIVAKH 260 (429)
Q Consensus 236 ~p~N-PtG~~~~~~~l~~I~~~a~~~ 260 (429)
.... +.-.-....-...+++.|++.
T Consensus 71 ag~~~~~~~~~n~~~~~~l~~a~~~~ 96 (219)
T 3dqp_A 71 SGSGGKSLLKVDLYGAVKLMQAAEKA 96 (219)
T ss_dssp CCCTTSSCCCCCCHHHHHHHHHHHHT
T ss_pred CcCCCCCcEeEeHHHHHHHHHHHHHh
Confidence 4322 221222333356778888776
No 384
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=41.53 E-value=88 Score=27.53 Aligned_cols=89 Identities=10% Similarity=0.080 Sum_probs=47.2
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------C
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------K 228 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~ 228 (429)
...++||.|+...-..+...|.+.|..|++..-.-.. +.++..+..+- -|.+.++++++. +
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--------~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~~g~ 74 (264)
T 2dtx_A 8 DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG--------EAKYDHIECDV-----TNPDQVKASIDHIFKEYGS 74 (264)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC--------SCSSEEEECCT-----TCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc--------CCceEEEEecC-----CCHHHHHHHHHHHHHHcCC
Confidence 3467777766655556677788889877664322111 23333444322 256666665542 4
Q ss_pred CcEEEEcCCCCCccC--CCCHHHHHHHHHH
Q 014172 229 SRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 229 ~~~i~l~~p~NPtG~--~~~~~~l~~I~~~ 256 (429)
...++-+......+. ..+.++++++.++
T Consensus 75 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 104 (264)
T 2dtx_A 75 ISVLVNNAGIESYGKIESMSMGEWRRIIDV 104 (264)
T ss_dssp CCEEEECCCCCCCBCTTTSCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 555554433332232 2466666666553
No 385
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=41.33 E-value=1.4e+02 Score=25.35 Aligned_cols=96 Identities=18% Similarity=0.168 Sum_probs=49.1
Q ss_pred CcEEEecChHHHHHHHHHHhcCCC--CEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~g--d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------ 227 (429)
..++||.|+...-..+...|.+.| ..|++..-.-..........+.++..+..+- -|.+.+++.++.
T Consensus 4 k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~g 78 (250)
T 1yo6_A 4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTV-----TCDKSLDTFVSKVGEIVG 78 (250)
T ss_dssp SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCT-----TCHHHHHHHHHHHHHHHG
T ss_pred CEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeec-----CCHHHHHHHHHHHHHhcC
Confidence 356777666554456677788888 7776654332222222221244555555432 256666655541
Q ss_pred --CCcEEEEcCCCCC-cc--CCCCHHHHHHHHHH
Q 014172 228 --KSRLLILCSPSNP-TG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 --~~~~i~l~~p~NP-tG--~~~~~~~l~~I~~~ 256 (429)
+...++.+....+ .+ ...+.+++++..++
T Consensus 79 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~ 112 (250)
T 1yo6_A 79 SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDV 112 (250)
T ss_dssp GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHH
T ss_pred CCCCcEEEECCcccCCCcccccCCHHHHHHHHHH
Confidence 5666654433222 22 22455666655543
No 386
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=41.15 E-value=55 Score=28.52 Aligned_cols=97 Identities=8% Similarity=-0.048 Sum_probs=50.0
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcC-CCCCChH---HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc---
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPA-PFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~-p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--- 227 (429)
...++||.|+...-..+...|.+.|..|++.. ..-.... ...+..+.++..+..+- -|.+.+++.++.
T Consensus 13 ~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 87 (256)
T 3ezl_A 13 QRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNV-----GDWDSTKQAFDKVKA 87 (256)
T ss_dssp CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCC-----CCHHHHHHHHHHHHH
Confidence 34566666655544556677788897776643 3333322 23344566666665532 256666655542
Q ss_pred ---CCcEEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 228 ---KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 ---~~~~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
+...++.+......+ ...+.+++++..++
T Consensus 88 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~v 121 (256)
T 3ezl_A 88 EVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDT 121 (256)
T ss_dssp HTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHH
Confidence 344444333222222 23466666665543
No 387
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=40.18 E-value=77 Score=28.27 Aligned_cols=70 Identities=14% Similarity=0.091 Sum_probs=36.2
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCC-CChHHH---HH-HcCCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFW-VSYPEM---AR-IADATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y-~~~~~~---~~-~~g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
..++||.|+...-..+...|.+.|..|++..-.- ...... ++ ..|.++..+..+-.+ ..-..+.+++.++
T Consensus 24 k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~-~~~~~~~v~~~~~ 98 (288)
T 2x9g_A 24 PAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTN-SNVLPASCEEIIN 98 (288)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSC-STTHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCC-ccCCHHHHHHHHH
Confidence 4567776665544556667778888777654322 111122 22 346666666654321 0001666666554
No 388
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=39.64 E-value=89 Score=26.80 Aligned_cols=76 Identities=12% Similarity=0.176 Sum_probs=42.5
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEc-CCCCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc---
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIP-APFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~-~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--- 227 (429)
...+++|.|+...-..+...|.+.|..|++. ...-..... .++..+.++..+..+. -|.+.+++.++.
T Consensus 5 ~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 79 (247)
T 2hq1_A 5 GKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDV-----KNPEDVENMVKTAMD 79 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCT-----TSHHHHHHHHHHHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHHH
Confidence 3457777666554555667777888887765 332222222 2233466676666543 266777665542
Q ss_pred ---CCcEEEEc
Q 014172 228 ---KSRLLILC 235 (429)
Q Consensus 228 ---~~~~i~l~ 235 (429)
+...++-+
T Consensus 80 ~~~~~d~vi~~ 90 (247)
T 2hq1_A 80 AFGRIDILVNN 90 (247)
T ss_dssp HHSCCCEEEEC
T ss_pred hcCCCCEEEEC
Confidence 45555543
No 389
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=39.27 E-value=91 Score=26.73 Aligned_cols=95 Identities=13% Similarity=0.083 Sum_probs=47.8
Q ss_pred cEEEecChHHHHHHHHHHhcCCCC-------EEEEcCCCCCChHHHH---HHcCCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 157 QILVSNGAKQSILQAVLAVCSPGD-------EVIIPAPFWVSYPEMA---RIADATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 157 ~i~~t~G~~~al~~~l~~l~~~gd-------~Vlv~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
.+++|.|+...-..+...|.+.|. .|++..-.-....... +..+.++..+..+- -|.+.+++.+.
T Consensus 4 ~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~ 78 (244)
T 2bd0_A 4 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADI-----SDMADVRRLTT 78 (244)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCT-----TSHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecC-----CCHHHHHHHHH
Confidence 466676655444455666777776 6665543211112222 22366776666543 25666666554
Q ss_pred c------CCcEEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 227 E------KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 227 ~------~~~~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
. +...++.+....+.+ ...+.+++++..++
T Consensus 79 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 116 (244)
T 2bd0_A 79 HIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNT 116 (244)
T ss_dssp HHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHH
Confidence 2 456665443322222 12455666555443
No 390
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=39.10 E-value=1.5e+02 Score=27.06 Aligned_cols=103 Identities=14% Similarity=0.150 Sum_probs=52.3
Q ss_pred CCCcEEEecChHHHHHHHHHHhcC--CCCEEEEcCCCCCC----------hHHHHHHc--CCEEEEecCCCCCCCCCCHH
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCS--PGDEVIIPAPFWVS----------YPEMARIA--DATPVILPTRISENFLLDPK 219 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~--~gd~Vlv~~p~y~~----------~~~~~~~~--g~~~~~v~~~~~~~~~~d~e 219 (429)
....|+||.|+...-..++..|++ .|..|++..-.-.. ........ ++.++..++ -|.+
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-------~d~~ 81 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADI-------NNPL 81 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCT-------TCHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCC-------CCHH
Confidence 445788887655555556777777 78777665321110 00111122 334443333 2677
Q ss_pred HHHhhcccCCcEEEEcCCCCCccCCCCHHH--------HHHHHHHHHhCCCeEE
Q 014172 220 VLESKLTEKSRLLILCSPSNPTGSVYPKNL--------LDEIARIVAKHPRLLV 265 (429)
Q Consensus 220 ~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~--------l~~I~~~a~~~~~i~v 265 (429)
.++++...+...|+-+...... ..-+.++ ...+++.|++. ++.+
T Consensus 82 ~~~~~~~~~~D~vih~A~~~~~-~~~~~~~~~~~Nv~gt~~ll~aa~~~-~~~~ 133 (362)
T 3sxp_A 82 DLRRLEKLHFDYLFHQAAVSDT-TMLNQELVMKTNYQAFLNLLEIARSK-KAKV 133 (362)
T ss_dssp HHHHHTTSCCSEEEECCCCCGG-GCCCHHHHHHHHTHHHHHHHHHHHHT-TCEE
T ss_pred HHHHhhccCCCEEEECCccCCc-cccCHHHHHHHHHHHHHHHHHHHHHc-CCcE
Confidence 7877633456666643332111 1122222 24678888887 5443
No 391
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=38.27 E-value=1.3e+02 Score=26.53 Aligned_cols=97 Identities=12% Similarity=0.121 Sum_probs=53.0
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEc-CCCCCCh---HHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc---
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIP-APFWVSY---PEMARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~-~p~y~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--- 227 (429)
...++||.|+...-..+...|.+.|..|++. ...-... ...++..|.++..+..+- -|.+.+++.++.
T Consensus 27 ~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~ 101 (267)
T 3u5t_A 27 NKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADV-----SDPAAVRRLFATAEE 101 (267)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 3457777776655556677788889888764 2221111 223344577777776643 266666665542
Q ss_pred ---CCcEEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 228 ---KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 ---~~~~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
+...++-+....+.+ ...+.++++++.++
T Consensus 102 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~v 135 (267)
T 3u5t_A 102 AFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAV 135 (267)
T ss_dssp HHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 344444333222222 23466677766554
No 392
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=38.24 E-value=1.3e+02 Score=26.45 Aligned_cols=96 Identities=15% Similarity=0.038 Sum_probs=49.8
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCC-hHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc----
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS-YPE---MARIADATPVILPTRISENFLLDPKVLESKLTE---- 227 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~-~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~---- 227 (429)
..++||.|+...-..+...|.+.|..|++..-.-.. ... .....+.++..+..+- -|.+.+++.+..
T Consensus 26 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~ 100 (269)
T 3gk3_A 26 RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDV-----ADFESCERCAEKVLAD 100 (269)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecC-----CCHHHHHHHHHHHHHH
Confidence 345666655554455677788899887765421111 111 1223455566665542 256666655542
Q ss_pred --CCcEEEEcCCCCCccC--CCCHHHHHHHHHH
Q 014172 228 --KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 228 --~~~~i~l~~p~NPtG~--~~~~~~l~~I~~~ 256 (429)
+...++.+......+. ..+.++++++.+.
T Consensus 101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~ 133 (269)
T 3gk3_A 101 FGKVDVLINNAGITRDATFMKMTKGDWDAVMRT 133 (269)
T ss_dssp HSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCcchhhCCHHHHHHHHHH
Confidence 5566554433332222 3466666665543
No 393
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=38.09 E-value=1.4e+02 Score=25.25 Aligned_cols=94 Identities=17% Similarity=0.156 Sum_probs=52.5
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcC
Q 014172 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS 236 (429)
Q Consensus 157 ~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~ 236 (429)
+|++..++.-+.. +...|.+.|-.|++-+..........+..|..++.-+. .+.+.++++--.+.++++++.
T Consensus 2 ~iiIiG~G~~G~~-la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~-------~~~~~l~~a~i~~ad~vi~~~ 73 (218)
T 3l4b_C 2 KVIIIGGETTAYY-LARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDG-------SHKEILRDAEVSKNDVVVILT 73 (218)
T ss_dssp CEEEECCHHHHHH-HHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCT-------TSHHHHHHHTCCTTCEEEECC
T ss_pred EEEEECCCHHHHH-HHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCC-------CCHHHHHhcCcccCCEEEEec
Confidence 3666666666665 44566667766555554332333334456776544332 367778776444677887766
Q ss_pred CCCCccCCCCHHHHHHHHHHHHh-CCCeEEE
Q 014172 237 PSNPTGSVYPKNLLDEIARIVAK-HPRLLVL 266 (429)
Q Consensus 237 p~NPtG~~~~~~~l~~I~~~a~~-~~~i~vi 266 (429)
++. +.-..++..+++ ++...+|
T Consensus 74 ~~d--------~~n~~~~~~a~~~~~~~~ii 96 (218)
T 3l4b_C 74 PRD--------EVNLFIAQLVMKDFGVKRVV 96 (218)
T ss_dssp SCH--------HHHHHHHHHHHHTSCCCEEE
T ss_pred CCc--------HHHHHHHHHHHHHcCCCeEE
Confidence 542 234456666665 4344444
No 394
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=38.08 E-value=78 Score=27.94 Aligned_cols=77 Identities=13% Similarity=0.099 Sum_probs=41.5
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc---
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--- 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-..... .++..+.++..+..+- -|.+.+++.+..
T Consensus 33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~ 107 (279)
T 3ctm_A 33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNI-----SDPKSVEETISQQEK 107 (279)
T ss_dssp TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeec-----CCHHHHHHHHHHHHH
Confidence 34567777665544445566677778777665432222222 2233466666665532 256666665542
Q ss_pred ---CCcEEEEc
Q 014172 228 ---KSRLLILC 235 (429)
Q Consensus 228 ---~~~~i~l~ 235 (429)
+...++-+
T Consensus 108 ~~g~id~li~~ 118 (279)
T 3ctm_A 108 DFGTIDVFVAN 118 (279)
T ss_dssp HHSCCSEEEEC
T ss_pred HhCCCCEEEEC
Confidence 45665543
No 395
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=38.00 E-value=1.5e+02 Score=26.87 Aligned_cols=75 Identities=11% Similarity=-0.052 Sum_probs=42.7
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH---HHHH-------cCCEEEEecCCCCCCCCCCHHHHHh
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARI-------ADATPVILPTRISENFLLDPKVLES 223 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~---~~~~-------~g~~~~~v~~~~~~~~~~d~e~l~~ 223 (429)
....|+||.|+-..-..++..|++.|..|++..-.-..... .+.. .+++++..++ -|.+.+++
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-------~d~~~~~~ 96 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI-------RDLTTCEQ 96 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCT-------TCHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccC-------CCHHHHHH
Confidence 45678888765444455667777788777655432222221 1111 3445544443 27888888
Q ss_pred hcccCCcEEEEcC
Q 014172 224 KLTEKSRLLILCS 236 (429)
Q Consensus 224 ~l~~~~~~i~l~~ 236 (429)
++. +...|+-+.
T Consensus 97 ~~~-~~d~Vih~A 108 (351)
T 3ruf_A 97 VMK-GVDHVLHQA 108 (351)
T ss_dssp HTT-TCSEEEECC
T ss_pred Hhc-CCCEEEECC
Confidence 877 566666443
No 396
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=37.90 E-value=2.3e+02 Score=25.51 Aligned_cols=34 Identities=21% Similarity=0.460 Sum_probs=20.5
Q ss_pred cEEEecC---hHHHHHHHHHHhcCCC-CEEEEcCCCCCC
Q 014172 157 QILVSNG---AKQSILQAVLAVCSPG-DEVIIPAPFWVS 191 (429)
Q Consensus 157 ~i~~t~G---~~~al~~~l~~l~~~g-d~Vlv~~p~y~~ 191 (429)
-|++..| ..+++.++ +...+-| |.|++..|.|..
T Consensus 72 pviaGvg~~~t~~ai~la-~~a~~~Gadavlv~~P~y~~ 109 (291)
T 3tak_A 72 PIIAGTGANSTREAIELT-KAAKDLGADAALLVTPYYNK 109 (291)
T ss_dssp CEEEECCCSSHHHHHHHH-HHHHHHTCSEEEEECCCSSC
T ss_pred eEEEeCCCCCHHHHHHHH-HHHHhcCCCEEEEcCCCCCC
Confidence 4676665 45555543 3333334 888888888753
No 397
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=37.90 E-value=1.2e+02 Score=26.84 Aligned_cols=99 Identities=12% Similarity=0.123 Sum_probs=53.3
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH---HHHcCC---EEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADA---TPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~---~~~~g~---~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
+....++||.|+...-..+...|.+.|..|++..-.-...... ++..+. ++..+..+- -|.+.+++.++
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~ 83 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDI-----TNEDETARAVD 83 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCT-----TSHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCC-----CCHHHHHHHHH
Confidence 3445677777766555566777888898887765322222222 222333 666666543 25666666554
Q ss_pred c------CCcEEEEcCCC-CCcc--CCCCHHHHHHHHHH
Q 014172 227 E------KSRLLILCSPS-NPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 227 ~------~~~~i~l~~p~-NPtG--~~~~~~~l~~I~~~ 256 (429)
. +...++-+... .+.+ ...+.++++++.++
T Consensus 84 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~v 122 (281)
T 3svt_A 84 AVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDL 122 (281)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHH
Confidence 2 45555433332 2222 23566667665543
No 398
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=37.82 E-value=92 Score=26.80 Aligned_cols=99 Identities=16% Similarity=0.200 Sum_probs=49.7
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH---HHHcC-CEEEEecCCCCCCCCCCHHHHHhhccc---
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIAD-ATPVILPTRISENFLLDPKVLESKLTE--- 227 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~---~~~~g-~~~~~v~~~~~~~~~~d~e~l~~~l~~--- 227 (429)
...++||.|+...-..+...|.+.|..|++..-.-...... ++..+ .++..+..+.+. -|.+.+++.+..
T Consensus 14 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~---~~~~~~~~~~~~~~~ 90 (247)
T 3i1j_A 14 GRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLEN---ATAQQYRELAARVEH 90 (247)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTT---CCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEecccc---CCHHHHHHHHHHHHH
Confidence 34567776665555556777888898877765432222222 22222 233333332222 256666555431
Q ss_pred ---CCcEEEEcCCC-CCcc--CCCCHHHHHHHHHH
Q 014172 228 ---KSRLLILCSPS-NPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 ---~~~~i~l~~p~-NPtG--~~~~~~~l~~I~~~ 256 (429)
+...++.+... .+.+ ...+.+++++..++
T Consensus 91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 125 (247)
T 3i1j_A 91 EFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHV 125 (247)
T ss_dssp HHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHH
Confidence 45565543332 2222 23466677666654
No 399
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=37.31 E-value=30 Score=30.85 Aligned_cols=48 Identities=10% Similarity=0.195 Sum_probs=29.4
Q ss_pred CCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEc
Q 014172 214 FLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 268 (429)
Q Consensus 214 ~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~D 268 (429)
|.+|.-++.++..-+..+|++. ...++.++++++.+.|++. |+.+++|
T Consensus 109 fi~~~~qi~ea~~~GAD~ilLi------~a~l~~~~l~~l~~~a~~l-Gl~~lvE 156 (251)
T 1i4n_A 109 FYIDTVQVKLASSVGADAILII------ARILTAEQIKEIYEAAEEL-GMDSLVE 156 (251)
T ss_dssp CCCSTHHHHHHHHTTCSEEEEE------GGGSCHHHHHHHHHHHHTT-TCEEEEE
T ss_pred CCCCHHHHHHHHHcCCCEEEEe------cccCCHHHHHHHHHHHHHc-CCeEEEE
Confidence 4455555555444455555542 2235667788888888887 7777766
No 400
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=37.27 E-value=1.3e+02 Score=26.23 Aligned_cols=96 Identities=7% Similarity=-0.015 Sum_probs=51.3
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEE-cCCCCCChH---HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc----
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVII-PAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTE---- 227 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv-~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~---- 227 (429)
..++||.|+...-..+...|.+.|..|++ ..-.-.... ..+...+.++..+..+- -|.+.+++.+..
T Consensus 27 k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~ 101 (267)
T 4iiu_A 27 RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDV-----ANREQCREVLEHEIAQ 101 (267)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecC-----CCHHHHHHHHHHHHHH
Confidence 45677766665555667778888988755 322111112 22334466666666543 266666665542
Q ss_pred --CCcEEEEcCCCCCccC--CCCHHHHHHHHHH
Q 014172 228 --KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 228 --~~~~i~l~~p~NPtG~--~~~~~~l~~I~~~ 256 (429)
+...++.+......+. ..+.+++++..++
T Consensus 102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~ 134 (267)
T 4iiu_A 102 HGAWYGVVSNAGIARDAAFPALSNDDWDAVIHT 134 (267)
T ss_dssp HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred hCCccEEEECCCCCCCCccccCCHHHHHHHHHH
Confidence 4555554333222222 3466667666554
No 401
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=36.99 E-value=1.6e+02 Score=25.48 Aligned_cols=100 Identities=10% Similarity=0.046 Sum_probs=50.1
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHH----HcCCEEEEecCCCCCCCCCCHHHHHhhccc--
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR----IADATPVILPTRISENFLLDPKVLESKLTE-- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-- 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-.......+ ..+.++..+..+... -|.+.+++.+..
T Consensus 11 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~~~~ 87 (252)
T 3f1l_A 11 NDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLT---CTSENCQQLAQRIA 87 (252)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTT---CCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEeccc---CCHHHHHHHHHHHH
Confidence 34467777766655555667788889888776533222222222 122233444433211 255666555431
Q ss_pred ----CCcEEEEcCCC-CCcc--CCCCHHHHHHHHHH
Q 014172 228 ----KSRLLILCSPS-NPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 ----~~~~i~l~~p~-NPtG--~~~~~~~l~~I~~~ 256 (429)
+...++-+... .+.+ ...+.++++++.++
T Consensus 88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 123 (252)
T 3f1l_A 88 VNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQV 123 (252)
T ss_dssp HHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHH
T ss_pred HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhh
Confidence 45555543322 2222 23566777766654
No 402
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=36.98 E-value=73 Score=27.74 Aligned_cols=93 Identities=11% Similarity=0.023 Sum_probs=46.4
Q ss_pred EEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------CCcE
Q 014172 158 ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRL 231 (429)
Q Consensus 158 i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~~~~ 231 (429)
+++|.|+...-..+...|.+.|..|++..-.-.......+..+.++..+..+- -|.+.+++.++. +...
T Consensus 3 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~iD~ 77 (248)
T 3asu_A 3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDV-----RNRAAIEEMLASLPAEWCNIDI 77 (248)
T ss_dssp EEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHHTSCTTTCCCCE
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCC-----CCHHHHHHHHHHHHHhCCCCCE
Confidence 56665554444455666777888877654322222233333444555555532 256777666542 3445
Q ss_pred EEEcCCCC-Ccc--CCCCHHHHHHHHH
Q 014172 232 LILCSPSN-PTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 232 i~l~~p~N-PtG--~~~~~~~l~~I~~ 255 (429)
++-+.... +.+ ...+.++++++.+
T Consensus 78 lvnnAg~~~~~~~~~~~~~~~~~~~~~ 104 (248)
T 3asu_A 78 LVNNAGLALGMEPAHKASVEDWETMID 104 (248)
T ss_dssp EEECCCCCCCCSCGGGSCHHHHHHHHH
T ss_pred EEECCCcCCCCCchhhCCHHHHHHHHH
Confidence 44332221 112 2346666666544
No 403
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=36.87 E-value=1.5e+02 Score=26.02 Aligned_cols=94 Identities=12% Similarity=0.015 Sum_probs=47.3
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH---HHHcC--CEEEEecCCCCCCCCCCHHHHHhhccc--
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIAD--ATPVILPTRISENFLLDPKVLESKLTE-- 227 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~---~~~~g--~~~~~v~~~~~~~~~~d~e~l~~~l~~-- 227 (429)
...++||.|+...-..+...|.+.|..|++..-.-...... ++..| .++..+..+. -|.+.+++.++.
T Consensus 32 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~ 106 (279)
T 1xg5_A 32 DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDL-----SNEEDILSMFSAIR 106 (279)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecC-----CCHHHHHHHHHHHH
Confidence 34577776655544556677778888877654321111111 22223 4555555432 266776665542
Q ss_pred ----CCcEEEEcCCCCCccC--CCCHHHHHHH
Q 014172 228 ----KSRLLILCSPSNPTGS--VYPKNLLDEI 253 (429)
Q Consensus 228 ----~~~~i~l~~p~NPtG~--~~~~~~l~~I 253 (429)
+...|+-+....+.+. ..+.++++++
T Consensus 107 ~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~ 138 (279)
T 1xg5_A 107 SQHSGVDICINNAGLARPDTLLSGSTSGWKDM 138 (279)
T ss_dssp HHHCCCSEEEECCCCCCCCCTTTCCHHHHHHH
T ss_pred HhCCCCCEEEECCCCCCCCCcccCCHHHHHHH
Confidence 4566654433322222 2355555443
No 404
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=36.79 E-value=1.4e+02 Score=25.83 Aligned_cols=97 Identities=12% Similarity=0.070 Sum_probs=49.8
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc---
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--- 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-..... .++..|.++..+..+- -|.+.+++.+..
T Consensus 13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 87 (260)
T 2zat_A 13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHV-----GKAEDRERLVAMAVN 87 (260)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccC-----CCHHHHHHHHHHHHH
Confidence 33467777666555555667778888877765432111111 1223465666665532 256666655542
Q ss_pred ---CCcEEEEcCCCCC-cc--CCCCHHHHHHHHH
Q 014172 228 ---KSRLLILCSPSNP-TG--SVYPKNLLDEIAR 255 (429)
Q Consensus 228 ---~~~~i~l~~p~NP-tG--~~~~~~~l~~I~~ 255 (429)
+...++-+....+ .+ ...+.++++++.+
T Consensus 88 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 121 (260)
T 2zat_A 88 LHGGVDILVSNAAVNPFFGNIIDATEEVWDKILH 121 (260)
T ss_dssp HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 4555554333221 12 1346666665544
No 405
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=36.59 E-value=1.4e+02 Score=26.13 Aligned_cols=91 Identities=12% Similarity=-0.004 Sum_probs=46.7
Q ss_pred EEEecChHHHHHHHHHHhcCC--CCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEc
Q 014172 158 ILVSNGAKQSILQAVLAVCSP--GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC 235 (429)
Q Consensus 158 i~~t~G~~~al~~~l~~l~~~--gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~ 235 (429)
|++|.|+...-..++..|++. |..|.+..-.-.... .+...+++++..++ -|.+.+++++. +...|+.+
T Consensus 2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~D~-------~d~~~~~~~~~-~~d~vi~~ 72 (286)
T 2zcu_A 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQ-ALAAQGITVRQADY-------GDEAALTSALQ-GVEKLLLI 72 (286)
T ss_dssp EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCH-HHHHTTCEEEECCT-------TCHHHHHHHTT-TCSEEEEC
T ss_pred EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhh-hhhcCCCeEEEcCC-------CCHHHHHHHHh-CCCEEEEe
Confidence 667765444344466677776 765554332111222 22334666655443 27788888876 45666644
Q ss_pred CCCCCccCCCCHHHHHHHHHHHHhC
Q 014172 236 SPSNPTGSVYPKNLLDEIARIVAKH 260 (429)
Q Consensus 236 ~p~NPtG~~~~~~~l~~I~~~a~~~ 260 (429)
...++.. .....+.+++.|++.
T Consensus 73 a~~~~~~---~~~~~~~l~~a~~~~ 94 (286)
T 2zcu_A 73 SSSEVGQ---RAPQHRNVINAAKAA 94 (286)
T ss_dssp C-----------CHHHHHHHHHHHH
T ss_pred CCCCchH---HHHHHHHHHHHHHHc
Confidence 4332221 122367788888876
No 406
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=36.51 E-value=1.7e+02 Score=25.79 Aligned_cols=97 Identities=11% Similarity=0.040 Sum_probs=50.3
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCC-h---HHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc---
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS-Y---PEMARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~-~---~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--- 227 (429)
...++||.|+...-..+...|.+.|..|++..-.-.. . ...++..|.++..+..+- -|.+.+++.+..
T Consensus 29 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 103 (283)
T 1g0o_A 29 GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANV-----GVVEDIVRMFEEAVK 103 (283)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 3456676665554455667777889887765322111 1 122344566776666543 256666655432
Q ss_pred ---CCcEEEEcCCCCCccC--CCCHHHHHHHHHH
Q 014172 228 ---KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 228 ---~~~~i~l~~p~NPtG~--~~~~~~l~~I~~~ 256 (429)
+...++-+......+. ..+.++++++.++
T Consensus 104 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 137 (283)
T 1g0o_A 104 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTI 137 (283)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 4555543332222221 2466677666553
No 407
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=36.38 E-value=1.1e+02 Score=26.44 Aligned_cols=94 Identities=4% Similarity=-0.023 Sum_probs=48.1
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCC-CCCChH---HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc----
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAP-FWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTE---- 227 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p-~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~---- 227 (429)
..++||.|+...-..+...|.+.|..|++..- .-.... ..++..+.++..+..+. -|.+.+++.+..
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 82 (261)
T 1gee_A 8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDV-----TVESDVINLVQSAIKE 82 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 45677766555445566777778887776542 211111 12233466776666543 256666655542
Q ss_pred --CCcEEEEcCCCCCcc--CCCCHHHHHHHH
Q 014172 228 --KSRLLILCSPSNPTG--SVYPKNLLDEIA 254 (429)
Q Consensus 228 --~~~~i~l~~p~NPtG--~~~~~~~l~~I~ 254 (429)
+...++-+....+.+ ...+.+++++..
T Consensus 83 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~ 113 (261)
T 1gee_A 83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVI 113 (261)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHH
Confidence 456655443322222 124555555443
No 408
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=36.31 E-value=1.8e+02 Score=25.05 Aligned_cols=90 Identities=11% Similarity=0.062 Sum_probs=46.6
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------ 227 (429)
....+++|.|+...-..+...|.+.|..|++..-.-.. +..++..+..++ -|.+.+++.++.
T Consensus 6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~D~-------~d~~~~~~~~~~~~~~~g 73 (250)
T 2fwm_X 6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----EQYPFATEVMDV-------ADAAQVAQVCQRLLAETE 73 (250)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-----SCCSSEEEECCT-------TCHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-----hcCCceEEEcCC-------CCHHHHHHHHHHHHHHcC
Confidence 33467777666555555667778888877664322110 112444444433 256666666542
Q ss_pred CCcEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 228 KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
+...++-+....+.+ ...+.++++++.+
T Consensus 74 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 103 (250)
T 2fwm_X 74 RLDALVNAAGILRMGATDQLSKEDWQQTFA 103 (250)
T ss_dssp CCCEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 455555433322222 2346666766554
No 409
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=36.28 E-value=1.3e+02 Score=27.51 Aligned_cols=95 Identities=14% Similarity=0.131 Sum_probs=50.5
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCC--CCCC------hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAP--FWVS------YPEMARIADATPVILPTRISENFLLDPKVLESKLTE 227 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p--~y~~------~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~ 227 (429)
..++||.|+...-..+...|++.|.+|++..- .-.. ....+...|.++..+.++- -|.+.++++++.
T Consensus 6 k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dv-----td~~~v~~~~~~ 80 (324)
T 3u9l_A 6 KIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDV-----QSQVSVDRAIDQ 80 (324)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCT-----TCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeec-----CCHHHHHHHHHH
Confidence 45677766665555667778889988875321 1111 1122334466666666543 256666665542
Q ss_pred ------CCcEEEEcCCCCCccC--CCCHHHHHHHHH
Q 014172 228 ------KSRLLILCSPSNPTGS--VYPKNLLDEIAR 255 (429)
Q Consensus 228 ------~~~~i~l~~p~NPtG~--~~~~~~l~~I~~ 255 (429)
+...++-+......|. ..+.++++++.+
T Consensus 81 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~ 116 (324)
T 3u9l_A 81 IIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYD 116 (324)
T ss_dssp HHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 4555543333333222 236666655443
No 410
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=35.77 E-value=1.4e+02 Score=25.38 Aligned_cols=92 Identities=9% Similarity=-0.047 Sum_probs=44.9
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHc-CCEEEEecCCCCCCCCCCHHHHHhhccc------CC
Q 014172 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA-DATPVILPTRISENFLLDPKVLESKLTE------KS 229 (429)
Q Consensus 157 ~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~~ 229 (429)
.+++|.|+...-..+...|.+.|..|++..-.-.......... ++.++..++ -|.+.+++.++. +.
T Consensus 7 ~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~-------~~~~~~~~~~~~~~~~~~~i 79 (234)
T 2ehd_A 7 AVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDV-------REEGDWARAVAAMEEAFGEL 79 (234)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCT-------TCHHHHHHHHHHHHHHHSCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecC-------CCHHHHHHHHHHHHHHcCCC
Confidence 4677766555445566777788887776543211122222222 344444433 256666655432 45
Q ss_pred cEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 230 RLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 230 ~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
..++-+....+.+ ...+.+++++..+
T Consensus 80 d~li~~Ag~~~~~~~~~~~~~~~~~~~~ 107 (234)
T 2ehd_A 80 SALVNNAGVGVMKPVHELTLEEWRLVLD 107 (234)
T ss_dssp CEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 5555433322222 1235555554433
No 411
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=35.48 E-value=1e+02 Score=26.71 Aligned_cols=94 Identities=17% Similarity=0.152 Sum_probs=48.3
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------CCc
Q 014172 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSR 230 (429)
Q Consensus 157 ~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~~~ 230 (429)
.+++|.|+...-..+.+.|.+.|..|++..-.-.......... .+...+..+- -|.+.+++.++. +..
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id 77 (247)
T 3dii_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKER-PNLFYFHGDV-----ADPLTLKKFVEYAMEKLQRID 77 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTC-TTEEEEECCT-----TSHHHHHHHHHHHHHHHSCCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-ccCCeEEeeC-----CCHHHHHHHHHHHHHHcCCCC
Confidence 4677776665555667778888988877653322222222222 2233444332 266666665542 455
Q ss_pred EEEEcCCCCCcc--CCCCHHHHHHHHHH
Q 014172 231 LLILCSPSNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 231 ~i~l~~p~NPtG--~~~~~~~l~~I~~~ 256 (429)
.++-+....+.+ ...+.++++++.++
T Consensus 78 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 105 (247)
T 3dii_A 78 VLVNNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp EEEECCC-CCCCGGGTCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 555443322222 24466677666554
No 412
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=35.18 E-value=36 Score=33.49 Aligned_cols=72 Identities=10% Similarity=0.079 Sum_probs=49.0
Q ss_pred cCCCCCChHHHHHHc-CCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCe
Q 014172 185 PAPFWVSYPEMARIA-DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL 263 (429)
Q Consensus 185 ~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i 263 (429)
.-|.|..|....+.- ......+-+..+ .-++.++++.+...++| +.+-+-| .+..++|.++|+++ ++
T Consensus 20 ~~Pv~~~~~~~~~~p~~~DlavI~vPa~----~v~~~v~e~~~~Gv~~v-iis~Gf~------~~~~~~l~~~A~~~-g~ 87 (480)
T 3dmy_A 20 ALTQVRRWDSACQKLPDANLALISVAGE----YAAELANQALDRNLNVM-MFSDNVT------LEDEIQLKTRAREK-GL 87 (480)
T ss_dssp CCEEESSHHHHHHHSTTCCEEEECSCHH----HHHHHHHHHHHTTCEEE-ECCCCCC------HHHHHHHHHHHHHT-TC
T ss_pred CCcccchHHHHHhcCCCCCEEEEecCHH----HHHHHHHHHHhcCCCEE-EECCCCC------HHHHHHHHHHHHHc-CC
Confidence 457788898888774 455555544322 25778888888888844 4333222 66678999999999 99
Q ss_pred EEEEc
Q 014172 264 LVLSD 268 (429)
Q Consensus 264 ~vi~D 268 (429)
.||==
T Consensus 88 rliGP 92 (480)
T 3dmy_A 88 LVMGP 92 (480)
T ss_dssp CEECS
T ss_pred EEEec
Confidence 98833
No 413
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=35.07 E-value=90 Score=30.36 Aligned_cols=95 Identities=13% Similarity=0.184 Sum_probs=56.7
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHH-HHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcE
Q 014172 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA-RIADATPVILPTRISENFLLDPKVLESKLTEKSRL 231 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~-~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~ 231 (429)
+....|++..||..+... +..|++.|..|.+-+|....-.... ...+++.+.-. ...+.+. +..+
T Consensus 10 l~~~~vlVvGgG~va~~k-~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~--------~~~~~l~-----~~~l 75 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERK-ARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGP--------FDETLLD-----SCWL 75 (457)
T ss_dssp CBTCEEEEECCSHHHHHH-HHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESS--------CCGGGGT-----TCSE
T ss_pred CCCCEEEEECCCHHHHHH-HHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECC--------CCccccC-----CccE
Confidence 445678888888888884 5777788988888787654322221 12234443321 2333332 2334
Q ss_pred EEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEE-EEccC
Q 014172 232 LILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLV-LSDEI 270 (429)
Q Consensus 232 i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~v-i~Dea 270 (429)
++.+|++| +.=..+++.|+++ +++| +.|+.
T Consensus 76 -Vi~at~~~-------~~n~~i~~~a~~~-~i~vn~~d~~ 106 (457)
T 1pjq_A 76 -AIAATDDD-------TVNQRVSDAAESR-RIFCNVVDAP 106 (457)
T ss_dssp -EEECCSCH-------HHHHHHHHHHHHT-TCEEEETTCT
T ss_pred -EEEcCCCH-------HHHHHHHHHHHHc-CCEEEECCCc
Confidence 44566554 2246789999999 8887 45665
No 414
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=34.73 E-value=1.3e+02 Score=23.36 Aligned_cols=94 Identities=13% Similarity=0.139 Sum_probs=51.7
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEc
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC 235 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~ 235 (429)
++|++...+.-+.. +...|.+.|-.|++-+..- .....++..|..++.-+. -+.+.++++--.+.++++++
T Consensus 8 ~~viIiG~G~~G~~-la~~L~~~g~~v~vid~~~-~~~~~~~~~g~~~i~gd~-------~~~~~l~~a~i~~ad~vi~~ 78 (140)
T 3fwz_A 8 NHALLVGYGRVGSL-LGEKLLASDIPLVVIETSR-TRVDELRERGVRAVLGNA-------ANEEIMQLAHLECAKWLILT 78 (140)
T ss_dssp SCEEEECCSHHHHH-HHHHHHHTTCCEEEEESCH-HHHHHHHHTTCEEEESCT-------TSHHHHHHTTGGGCSEEEEC
T ss_pred CCEEEECcCHHHHH-HHHHHHHCCCCEEEEECCH-HHHHHHHHcCCCEEECCC-------CCHHHHHhcCcccCCEEEEE
Confidence 46777766666666 3455556675555555432 233444557877654332 36677766533467788877
Q ss_pred CCCCCccCCCCHHHHHHHHHHHHhC-CCeEEE
Q 014172 236 SPSNPTGSVYPKNLLDEIARIVAKH-PRLLVL 266 (429)
Q Consensus 236 ~p~NPtG~~~~~~~l~~I~~~a~~~-~~i~vi 266 (429)
.|+. ++-..++..+++. |++.+|
T Consensus 79 ~~~~--------~~n~~~~~~a~~~~~~~~ii 102 (140)
T 3fwz_A 79 IPNG--------YEAGEIVASARAKNPDIEII 102 (140)
T ss_dssp CSCH--------HHHHHHHHHHHHHCSSSEEE
T ss_pred CCCh--------HHHHHHHHHHHHHCCCCeEE
Confidence 6653 2233345555543 445554
No 415
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=34.56 E-value=89 Score=27.44 Aligned_cols=91 Identities=11% Similarity=0.019 Sum_probs=48.5
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------ 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-... ...++..+..+- -|.+.+++.++.
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 95 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS------ADPDIHTVAGDI-----SKPETADRIVREGIERFG 95 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCC------SSTTEEEEESCT-----TSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhc------ccCceEEEEccC-----CCHHHHHHHHHHHHHHCC
Confidence 345677776666555566777888898877654322111 112344454432 266666665542
Q ss_pred CCcEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 228 KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
+...++-+......+ ...+.++++++.+
T Consensus 96 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 125 (260)
T 3un1_A 96 RIDSLVNNAGVFLAKPFVEMTQEDYDHNLG 125 (260)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 556655443332222 2346677766544
No 416
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=34.27 E-value=2.6e+02 Score=25.11 Aligned_cols=84 Identities=18% Similarity=0.343 Sum_probs=46.3
Q ss_pred cEEEecCh---HHHHHHHHHHhcCCC-CEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-----
Q 014172 157 QILVSNGA---KQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE----- 227 (429)
Q Consensus 157 ~i~~t~G~---~~al~~~l~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~----- 227 (429)
-|++..|+ .+++.++-. .-+-| |-|++..|.|... +.+.+.+.++.
T Consensus 72 pvi~Gvg~~~t~~ai~la~~-a~~~Gadavlv~~P~y~~~------------------------s~~~l~~~f~~ia~a~ 126 (291)
T 3a5f_A 72 PVIAGTGSNNTAASIAMSKW-AESIGVDGLLVITPYYNKT------------------------TQKGLVKHFKAVSDAV 126 (291)
T ss_dssp CEEEECCCSSHHHHHHHHHH-HHHTTCSEEEEECCCSSCC------------------------CHHHHHHHC-CTGGGC
T ss_pred cEEEeCCcccHHHHHHHHHH-HHhcCCCEEEEcCCCCCCC------------------------CHHHHHHHHHHHHHhc
Confidence 37777664 566654433 33445 8898888887531 22222222211
Q ss_pred CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccC
Q 014172 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 270 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Dea 270 (429)
+.-+++.+.|.. ||..++.+.+.+|+ ++|++.=|=|..
T Consensus 127 ~lPiilYn~P~~-tg~~l~~~~~~~La----~~pnivgiK~s~ 164 (291)
T 3a5f_A 127 STPIIIYNVPGR-TGLNITPGTLKELC----EDKNIVAVXEAS 164 (291)
T ss_dssp CSCEEEEECHHH-HSCCCCHHHHHHHT----TSTTEEEEEECS
T ss_pred CCCEEEEeCccc-cCCCCCHHHHHHHH----cCCCEEEEeCCC
Confidence 233555566654 88888865555554 356766665543
No 417
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=34.23 E-value=2.5e+02 Score=24.96 Aligned_cols=109 Identities=13% Similarity=0.090 Sum_probs=52.9
Q ss_pred hhcCCCCCCCcEEEecChHHHHHHHHHHhcCCC--CEEEEcCCCCCChHHHHHHcCC-EEEEecCCCCCCCCCCHHHHHh
Q 014172 147 EENGLSYTPDQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADA-TPVILPTRISENFLLDPKVLES 223 (429)
Q Consensus 147 ~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~g--d~Vlv~~p~y~~~~~~~~~~g~-~~~~v~~~~~~~~~~d~e~l~~ 223 (429)
+.+| +++++|++..-+..+...+..++..+. ..|+........-......... .++.+-.-. .+..+.++..++
T Consensus 150 ~~~~--id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~~~~~~~~~~~~~Pvl~~hG~-~D~~Vp~~~~~~ 226 (285)
T 4fhz_A 150 AEEG--LPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLAPERLAEEARSKPPVLLVHGD-ADPVVPFADMSL 226 (285)
T ss_dssp HHHT--CCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSCHHHHHHHCCCCCCEEEEEET-TCSSSCTHHHHH
T ss_pred HHhC--CCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccCchhhhhhhhhcCcccceeeC-CCCCcCHHHHHH
Confidence 3455 578899887656655554444444443 3455444433333333332222 122222211 222344444433
Q ss_pred ---hccc-CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhC
Q 014172 224 ---KLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 260 (429)
Q Consensus 224 ---~l~~-~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~ 260 (429)
.++. ....-+...|. .|-.++.++++.+.++.+++
T Consensus 227 ~~~~L~~~g~~~~~~~y~g--~gH~i~~~~l~~~~~fL~~~ 265 (285)
T 4fhz_A 227 AGEALAEAGFTTYGHVMKG--TGHGIAPDGLSVALAFLKER 265 (285)
T ss_dssp HHHHHHHTTCCEEEEEETT--CCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEEECC--CCCCCCHHHHHHHHHHHHHH
Confidence 3332 22222222221 23446788999999999876
No 418
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=34.16 E-value=98 Score=29.00 Aligned_cols=52 Identities=13% Similarity=0.096 Sum_probs=30.6
Q ss_pred CcEEEecChHHHHHHHHHHh-cCCCCEEEEcCCCCCChHHHHHHcCCEEEEec
Q 014172 156 DQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILP 207 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~ 207 (429)
..|+..+++..+...+..+- ..-.-.|+++.-.-..-...++.+|++++.++
T Consensus 94 ~~vv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~ 146 (364)
T 4h27_A 94 AHFVCSSSGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATVKVVG 146 (364)
T ss_dssp CEEEECCSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHTTTCEEEEEC
T ss_pred CEEEEeCCChHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHcCCEEEEEC
Confidence 45666666777766554442 22223455555432234466777999998886
No 419
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=33.92 E-value=1.1e+02 Score=26.60 Aligned_cols=96 Identities=10% Similarity=0.049 Sum_probs=48.2
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCC-CCCChH---HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc---
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAP-FWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p-~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--- 227 (429)
...+++|.|+...-..+...|.+.|..|++..- .-.... ..++..|.++..+..+- -|.+.+++.+..
T Consensus 21 ~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 95 (274)
T 1ja9_A 21 GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADI-----SKPSEVVALFDKAVS 95 (274)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHHHHHHH
Confidence 345677766555445566777788877766432 211111 12233466666666542 266676665542
Q ss_pred ---CCcEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 228 ---KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 228 ---~~~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
+...++-+....+.+ ...+.+++++..+
T Consensus 96 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 128 (274)
T 1ja9_A 96 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFN 128 (274)
T ss_dssp HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCcccccCCHHHHHHHHH
Confidence 344444222222222 1245556655554
No 420
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A
Probab=33.92 E-value=1.1e+02 Score=31.32 Aligned_cols=103 Identities=13% Similarity=0.124 Sum_probs=59.3
Q ss_pred CCCCCcEEEecChHHHHHHHHHHhc---CCC--CEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 152 SYTPDQILVSNGAKQSILQAVLAVC---SPG--DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 152 ~~~~~~i~~t~G~~~al~~~l~~l~---~~g--d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
.++++.|.++.++..+++..++.|. ..+ ...+...|.|+- +-..+++. .+--+.++.|++.|+
T Consensus 42 ~i~~~~i~I~a~~~~G~~~glqTL~QL~~~~~~~~~I~D~P~f~~----------RG~mlD~s--R~~f~~~~~ik~~id 109 (627)
T 2epl_X 42 EGRQGYYQVSYKQPHQLYRALALLSAALRSGQDEVQIEEEAAYED----------LAYMADCS--RNAVLNLSSAKKMIE 109 (627)
T ss_dssp EEETTEEEEEESSTTHHHHHHHHHHHHHHTTCSSEEEEECCSCSE----------EEEEEECS--SSCCBCHHHHHHHHH
T ss_pred EEeCCEEEEEECCHHHHHHHHHHHHHHhhcCCCceEEEeCCCCCc----------cceEEecC--CCCCCCHHHHHHHHH
Confidence 3556678888776666655555542 222 345555666531 22333332 220257777776664
Q ss_pred c----CCcEE-E-E----cCCCCC----ccCCCCHHHHHHHHHHHHhCCCeEEEE
Q 014172 227 E----KSRLL-I-L----CSPSNP----TGSVYPKNLLDEIARIVAKHPRLLVLS 267 (429)
Q Consensus 227 ~----~~~~i-~-l----~~p~NP----tG~~~~~~~l~~I~~~a~~~~~i~vi~ 267 (429)
. |-..+ + + ..+..| .|-.++++++++|++.|+++ ++-||-
T Consensus 110 ~ma~~KlN~lh~Hl~D~~ei~~~P~l~~~~~~YT~~di~eiv~yA~~r-gI~VIP 163 (627)
T 2epl_X 110 VLALMGYSTFELYMEDTYEIENQPYFGYFRGRYTVAELQEIEDYAADF-DMSFVP 163 (627)
T ss_dssp HHHHHTCCEEEEECSSCBCCTTCTTTTTTTTCBCHHHHHHHHHHHHHT-TCEEEE
T ss_pred HHHHcCCcEEEEEeecccccCCCcccCccCCCcCHHHHHHHHHHHHHc-CCEEEE
Confidence 2 22222 1 1 122223 46789999999999999999 998884
No 421
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=33.86 E-value=30 Score=33.74 Aligned_cols=29 Identities=10% Similarity=0.324 Sum_probs=25.4
Q ss_pred CCCccCCCCHHHHHHHHHHHHhCCCeEEEE
Q 014172 238 SNPTGSVYPKNLLDEIARIVAKHPRLLVLS 267 (429)
Q Consensus 238 ~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~ 267 (429)
++|.|..++++++++|++.|+++ +|-||-
T Consensus 85 ~~~~~~~YT~~di~eIv~YA~~r-gI~VIP 113 (442)
T 2yl5_A 85 DDPNGTALTQAEVTELIEYAKSK-DIGLIP 113 (442)
T ss_dssp CCTTCSCBCHHHHHHHHHHHHTT-TCEEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHc-CCeeee
Confidence 34668899999999999999999 998883
No 422
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=33.70 E-value=1.5e+02 Score=25.94 Aligned_cols=96 Identities=8% Similarity=-0.037 Sum_probs=50.6
Q ss_pred cEEEecChHHHHHHHHHHhcCC--CCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEE
Q 014172 157 QILVSNGAKQSILQAVLAVCSP--GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLIL 234 (429)
Q Consensus 157 ~i~~t~G~~~al~~~l~~l~~~--gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l 234 (429)
.|++|.|+-..-..++..|++. |..|.+..-.-.... .+...+++++..++ -|.+.+.+++. +...|+.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~l~~~~~~~~~~D~-------~d~~~l~~~~~-~~d~vi~ 72 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS-TLADQGVEVRHGDY-------NQPESLQKAFA-GVSKLLF 72 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH-HHHHTTCEEEECCT-------TCHHHHHHHTT-TCSEEEE
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh-HHhhcCCeEEEecc-------CCHHHHHHHHh-cCCEEEE
Confidence 3667765444344466677776 755554332111222 22334666655543 27788888876 4666665
Q ss_pred cCCCCCccCCCCHHHHHHHHHHHHhCCCe
Q 014172 235 CSPSNPTGSVYPKNLLDEIARIVAKHPRL 263 (429)
Q Consensus 235 ~~p~NPtG~~~~~~~l~~I~~~a~~~~~i 263 (429)
+...++. ......-...+++.|++. ++
T Consensus 73 ~a~~~~~-~~~n~~~~~~l~~a~~~~-~~ 99 (287)
T 2jl1_A 73 ISGPHYD-NTLLIVQHANVVKAARDA-GV 99 (287)
T ss_dssp CCCCCSC-HHHHHHHHHHHHHHHHHT-TC
T ss_pred cCCCCcC-chHHHHHHHHHHHHHHHc-CC
Confidence 4433221 000122356788888887 54
No 423
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=33.14 E-value=1.7e+02 Score=25.55 Aligned_cols=96 Identities=10% Similarity=0.068 Sum_probs=51.2
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEc-CCCCCCh---HHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc----
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIP-APFWVSY---PEMARIADATPVILPTRISENFLLDPKVLESKLTE---- 227 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~-~p~y~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~---- 227 (429)
..++||.|+...-..+...|.+.|..|++. .-.-... ...+...+.++..+..+. -|.+.+++.++.
T Consensus 27 k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~ 101 (272)
T 4e3z_A 27 PVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDV-----GNAADIAAMFSAVDRQ 101 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHh
Confidence 346666665554455667778889887654 3221111 223344577887777643 256666665542
Q ss_pred --CCcEEEEcCCCCCc-c--CCCCHHHHHHHHHH
Q 014172 228 --KSRLLILCSPSNPT-G--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 --~~~~i~l~~p~NPt-G--~~~~~~~l~~I~~~ 256 (429)
+...++.+...... + ...+.+++++..++
T Consensus 102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~ 135 (272)
T 4e3z_A 102 FGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRV 135 (272)
T ss_dssp HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhh
Confidence 45555543332211 1 12366666666554
No 424
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=32.83 E-value=1.1e+02 Score=27.81 Aligned_cols=67 Identities=12% Similarity=0.032 Sum_probs=37.0
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH---HHHcCC--EEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADA--TPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~---~~~~g~--~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
...++||.|+...-..+...|++.|..|++..-.-...... +...|. ++..+..+- -|.+.+++++.
T Consensus 8 ~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~ 79 (319)
T 3ioy_A 8 GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDV-----ASREGFKMAAD 79 (319)
T ss_dssp TCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCT-----TCHHHHHHHHH
T ss_pred CCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCC-----CCHHHHHHHHH
Confidence 34677776665555556677788898877665432222222 222333 555565542 25666666553
No 425
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=32.80 E-value=2.2e+02 Score=26.03 Aligned_cols=88 Identities=15% Similarity=0.232 Sum_probs=46.5
Q ss_pred cEEEecC---hHHHHHHHHHHhcCCC-CEEEEcCCCCCChHH--HHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCc
Q 014172 157 QILVSNG---AKQSILQAVLAVCSPG-DEVIIPAPFWVSYPE--MARIADATPVILPTRISENFLLDPKVLESKLTEKSR 230 (429)
Q Consensus 157 ~i~~t~G---~~~al~~~l~~l~~~g-d~Vlv~~p~y~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~ 230 (429)
-|++..| ..+++.++ +...+-| |.|++..|.|....+ ..+ -.+.+.++. ..-
T Consensus 95 pViaGvg~~~t~~ai~la-~~A~~~Gadavlv~~P~y~~~s~~~l~~-------------------~f~~va~a~--~lP 152 (315)
T 3na8_A 95 PTIVSVSDLTTAKTVRRA-QFAESLGAEAVMVLPISYWKLNEAEVFQ-------------------HYRAVGEAI--GVP 152 (315)
T ss_dssp CBEEECCCSSHHHHHHHH-HHHHHTTCSEEEECCCCSSCCCHHHHHH-------------------HHHHHHHHC--SSC
T ss_pred cEEEecCCCCHHHHHHHH-HHHHhcCCCEEEECCCCCCCCCHHHHHH-------------------HHHHHHHhC--CCc
Confidence 3666665 45666644 3333445 899999998853110 000 012222221 234
Q ss_pred EEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccC
Q 014172 231 LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 270 (429)
Q Consensus 231 ~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Dea 270 (429)
+++.+.|.. ||..++.+.+. +++.++|++.=|=|..
T Consensus 153 iilYn~P~~-tg~~l~~~~~~---~L~a~~pnIvgiKdss 188 (315)
T 3na8_A 153 VMLYNNPGT-SGIDMSVELIL---RIVREVDNVTMVKEST 188 (315)
T ss_dssp EEEEECHHH-HSCCCCHHHHH---HHHHHSTTEEEEEECS
T ss_pred EEEEeCcch-hCcCCCHHHHH---HHHhcCCCEEEEECCC
Confidence 555555543 78888855444 4433456777776654
No 426
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=32.79 E-value=1.3e+02 Score=28.35 Aligned_cols=63 Identities=11% Similarity=0.024 Sum_probs=36.8
Q ss_pred HHHHHHHhhcCC-CCCCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEE
Q 014172 140 AICHKLKEENGL-SYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATP 203 (429)
Q Consensus 140 ~ia~~l~~~~g~-~~~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~ 203 (429)
.+.+.+++.+|. .+....|.+...+.-+.. +.+.+.+.|-+|++.++........++..|++.
T Consensus 157 ~~~~~~~~~~G~~~L~GktV~V~G~G~VG~~-~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~ 220 (364)
T 1leh_A 157 GMKAAAKEAFGSDSLEGLAVSVQGLGNVAKA-LCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADA 220 (364)
T ss_dssp HHHHHHHHHHSSCCCTTCEEEEECCSHHHHH-HHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEE
T ss_pred HHHHHHHhhccccCCCcCEEEEECchHHHHH-HHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEE
Confidence 344444444564 466677777766666666 445556678788888865433333444456543
No 427
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=32.73 E-value=1.6e+02 Score=26.83 Aligned_cols=93 Identities=16% Similarity=0.129 Sum_probs=47.8
Q ss_pred cEEEecC---hHHHHHHHHHHhcCCC-CEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEE
Q 014172 157 QILVSNG---AKQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLL 232 (429)
Q Consensus 157 ~i~~t~G---~~~al~~~l~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i 232 (429)
-|++..| ..+++.++ +...+-| |.|++..|.|....+.+.. -.+.+.++..++.-++
T Consensus 78 pViaGvg~~~t~~ai~la-~~A~~~Gadavlv~~P~~~~s~~~l~~------------------~f~~va~a~~~~lPii 138 (313)
T 3dz1_A 78 QVIVGVSAPGFAAMRRLA-RLSMDAGAAGVMIAPPPSLRTDEQITT------------------YFRQATEAIGDDVPWV 138 (313)
T ss_dssp EEEEECCCSSHHHHHHHH-HHHHHHTCSEEEECCCTTCCSHHHHHH------------------HHHHHHHHHCTTSCEE
T ss_pred cEEEecCCCCHHHHHHHH-HHHHHcCCCEEEECCCCCCCCHHHHHH------------------HHHHHHHhCCCCCcEE
Confidence 3666655 44555543 3333334 8888887765431111100 1223333332224456
Q ss_pred EEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCc
Q 014172 233 ILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE 272 (429)
Q Consensus 233 ~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~ 272 (429)
+.+.|.. ||..++.+ .+.++++++|++.=|=|++..
T Consensus 139 lYn~P~~-tg~~l~~~---~~~~La~~~pnIvgiKd~~~~ 174 (313)
T 3dz1_A 139 LQDYPLT-LSVVMTPK---VIRQIVMDSASCVMLKHEDWP 174 (313)
T ss_dssp EEECHHH-HCCCCCHH---HHHHHHHHCSSEEEEEECCSS
T ss_pred EEeCccc-cCcCCCHH---HHHHHHHhCCCEEEEEcCCCC
Confidence 6666643 88888844 445555555677777775443
No 428
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=32.58 E-value=1.2e+02 Score=24.02 Aligned_cols=96 Identities=11% Similarity=-0.017 Sum_probs=50.5
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHH-HcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEE
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR-IADATPVILPTRISENFLLDPKVLESKLTEKSRLL 232 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i 232 (429)
....|++..++.-+... ...+...|-.|++.+..-.. ...++ ..|..++..+. .+.+.+.+.--.+..+|
T Consensus 18 ~~~~v~IiG~G~iG~~l-a~~L~~~g~~V~vid~~~~~-~~~~~~~~g~~~~~~d~-------~~~~~l~~~~~~~ad~V 88 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLI-ANLASSSGHSVVVVDKNEYA-FHRLNSEFSGFTVVGDA-------AEFETLKECGMEKADMV 88 (155)
T ss_dssp CCCEEEEECCSHHHHHH-HHHHHHTTCEEEEEESCGGG-GGGSCTTCCSEEEESCT-------TSHHHHHTTTGGGCSEE
T ss_pred CCCcEEEECCCHHHHHH-HHHHHhCCCeEEEEECCHHH-HHHHHhcCCCcEEEecC-------CCHHHHHHcCcccCCEE
Confidence 34577777666666653 44555567666666543222 22222 34555433221 25666665412356778
Q ss_pred EEcCCCCCccCCCCHHHHHHHHHHHHh-CCCeEEE
Q 014172 233 ILCSPSNPTGSVYPKNLLDEIARIVAK-HPRLLVL 266 (429)
Q Consensus 233 ~l~~p~NPtG~~~~~~~l~~I~~~a~~-~~~i~vi 266 (429)
+++.++ .+....+.+.+++ .+...++
T Consensus 89 i~~~~~--------~~~~~~~~~~~~~~~~~~~iv 115 (155)
T 2g1u_A 89 FAFTND--------DSTNFFISMNARYMFNVENVI 115 (155)
T ss_dssp EECSSC--------HHHHHHHHHHHHHTSCCSEEE
T ss_pred EEEeCC--------cHHHHHHHHHHHHHCCCCeEE
Confidence 777664 2335667777776 5334444
No 429
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=32.56 E-value=1.5e+02 Score=25.14 Aligned_cols=93 Identities=12% Similarity=0.064 Sum_probs=45.6
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCEEEEc-CCCCCChHH---HHHHcCCEEEE-ecCCCCCCCCCCHHHHHhhcc-----
Q 014172 157 QILVSNGAKQSILQAVLAVCSPGDEVIIP-APFWVSYPE---MARIADATPVI-LPTRISENFLLDPKVLESKLT----- 226 (429)
Q Consensus 157 ~i~~t~G~~~al~~~l~~l~~~gd~Vlv~-~p~y~~~~~---~~~~~g~~~~~-v~~~~~~~~~~d~e~l~~~l~----- 226 (429)
.+++|.|+...-..+...|.+.|..|++. .-.-..... .++..|.++.. +..+- -|.+.+++.++
T Consensus 3 ~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 77 (245)
T 2ph3_A 3 KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL-----LEAEAATALVHQAAEV 77 (245)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccC-----CCHHHHHHHHHHHHHh
Confidence 46677665554455667788889887764 322111111 12223444444 44432 25666666553
Q ss_pred -cCCcEEEEcCCCCCcc--CCCCHHHHHHHH
Q 014172 227 -EKSRLLILCSPSNPTG--SVYPKNLLDEIA 254 (429)
Q Consensus 227 -~~~~~i~l~~p~NPtG--~~~~~~~l~~I~ 254 (429)
.+...++-+....+.+ ...+.+++++..
T Consensus 78 ~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~ 108 (245)
T 2ph3_A 78 LGGLDTLVNNAGITRDTLLVRMKDEDWEAVL 108 (245)
T ss_dssp HTCCCEEEECCCCCCCBCGGGCCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHH
Confidence 2456665443322222 223555555443
No 430
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=32.18 E-value=31 Score=30.82 Aligned_cols=82 Identities=11% Similarity=0.201 Sum_probs=52.8
Q ss_pred EEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhC
Q 014172 181 EVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 260 (429)
Q Consensus 181 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~ 260 (429)
.|+++...|.+....++..... +.+|+-. .+|-+|+-++.++-.-...+|++ .-.+++.++++++.+.|++.
T Consensus 81 SVLTd~~~F~Gs~~~L~~vr~~-v~lPvLr-KDFiid~yQI~eAr~~GADaILL------I~a~L~~~~l~~l~~~A~~l 152 (258)
T 4a29_A 81 SITTEEKYFNGSYETLRKIASS-VSIPILM-SDFIVKESQIDDAYNLGADTVLL------IVKILTERELESLLEYARSY 152 (258)
T ss_dssp EEECCSTTTCCCHHHHHHHHTT-CSSCEEE-ESCCCSHHHHHHHHHHTCSEEEE------EGGGSCHHHHHHHHHHHHHT
T ss_pred EEeCCCCCCCCCHHHHHHHHHh-cCCCEee-ccccccHHHHHHHHHcCCCeeeh------HHhhcCHHHHHHHHHHHHHH
Confidence 4677777777655544432111 1344432 35889998888765445666654 23557888999999999999
Q ss_pred CCeEEEEccCCc
Q 014172 261 PRLLVLSDEIYE 272 (429)
Q Consensus 261 ~~i~vi~Deay~ 272 (429)
|+-+++ |++.
T Consensus 153 -Gl~~Lv-EVh~ 162 (258)
T 4a29_A 153 -GMEPLI-LIND 162 (258)
T ss_dssp -TCCCEE-EESS
T ss_pred -hHHHHH-hcch
Confidence 877776 4443
No 431
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=31.73 E-value=29 Score=33.77 Aligned_cols=29 Identities=7% Similarity=0.196 Sum_probs=26.4
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCcccc
Q 014172 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHII 275 (429)
Q Consensus 246 ~~~~l~~I~~~a~~~~~i~vi~Deay~~~~ 275 (429)
++++++++++-|+++ |+.||.|-++.+..
T Consensus 75 t~~df~~lv~~aH~~-Gi~VilD~V~NH~~ 103 (496)
T 4gqr_A 75 NEDEFRNMVTRCNNV-GVRIYVDAVINHMC 103 (496)
T ss_dssp CHHHHHHHHHHHHHT-TCEEEEEECCSEEE
T ss_pred CHHHHHHHHHHHHHC-CCEEEEEEccCcCC
Confidence 578899999999999 99999999988763
No 432
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=31.46 E-value=2.7e+02 Score=24.55 Aligned_cols=164 Identities=12% Similarity=0.124 Sum_probs=96.6
Q ss_pred HHHHHHHHhcCCCeEEcCCCCCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEec
Q 014172 84 TDQATALAQAGVSVIRLAAGEPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSN 162 (429)
Q Consensus 84 ~~~~~~~~~~g~~~i~L~~g~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~ 162 (429)
.+....+.+.|.++|-|+.-..+.-. -|.+.++..++++++. ....+-+.+.+. .. . --+++..
T Consensus 31 ~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~-------~~~~~~~~~~~~----r~---~-~Pivlm~ 95 (252)
T 3tha_A 31 EAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGV-------DIHSVFELLARI----KT---K-KALVFMV 95 (252)
T ss_dssp HHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTC-------CHHHHHHHHHHC----CC---S-SEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCC-------CHHHHHHHHHHH----hc---C-CCEEEEe
Confidence 34556677788999999877755333 3678888888887643 123444444332 11 0 1244332
Q ss_pred ChH----HHHHHHHHHhcCCC-CEEEEcCCCCC---ChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEE
Q 014172 163 GAK----QSILQAVLAVCSPG-DEVIIPAPFWV---SYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLIL 234 (429)
Q Consensus 163 G~~----~al~~~l~~l~~~g-d~Vlv~~p~y~---~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l 234 (429)
=.. -++...+..+.+.| |.+++++--+. .+...++..|...+.+-.. . -+.+.+++........||+
T Consensus 96 Y~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP--~---t~~eRi~~ia~~a~gFiY~ 170 (252)
T 3tha_A 96 YYNLIFSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSV--T---TPKERVKKLVKHAKGFIYL 170 (252)
T ss_dssp CHHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEET--T---SCHHHHHHHHTTCCSCEEE
T ss_pred ccCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCC--C---CcHHHHHHHHHhCCCeEEE
Confidence 222 23344455555666 88999885443 3556788899998775422 1 1467777766555567777
Q ss_pred cCCCCCccCCCCH-HHHHHHHHHHHhCCCeEEEE
Q 014172 235 CSPSNPTGSVYPK-NLLDEIARIVAKHPRLLVLS 267 (429)
Q Consensus 235 ~~p~NPtG~~~~~-~~l~~I~~~a~~~~~i~vi~ 267 (429)
.+-.--||..-.. +++.++++-++++.++.+++
T Consensus 171 Vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~v 204 (252)
T 3tha_A 171 LASIGITGTKSVEEAILQDKVKEIRSFTNLPIFV 204 (252)
T ss_dssp ECCSCSSSCSHHHHHHHHHHHHHHHTTCCSCEEE
T ss_pred EecCCCCCcccCCCHHHHHHHHHHHHhcCCcEEE
Confidence 6654568876432 24666777777663555553
No 433
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=31.41 E-value=2.4e+02 Score=24.66 Aligned_cols=96 Identities=10% Similarity=0.099 Sum_probs=47.7
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------ 227 (429)
....++||.|+...-..+...|.+.|..|++..-.-.......+... .+..+..+- -|.+.+++.++.
T Consensus 8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 81 (270)
T 1yde_A 8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-GAVFILCDV-----TQEDDVKTLVSETIRRFG 81 (270)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-TEEEEECCT-----TSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-CCeEEEcCC-----CCHHHHHHHHHHHHHHcC
Confidence 34567777766655556677788889887765432111222222222 133444332 256666665542
Q ss_pred CCcEEEEcCCCC-Ccc--CCCCHHHHHHHHH
Q 014172 228 KSRLLILCSPSN-PTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 228 ~~~~i~l~~p~N-PtG--~~~~~~~l~~I~~ 255 (429)
+...++-+.... +.+ ...+.++++++.+
T Consensus 82 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (270)
T 1yde_A 82 RLDCVVNNAGHHPPPQRPEETSAQGFRQLLE 112 (270)
T ss_dssp CCCEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 455555433222 112 1245566665544
No 434
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=30.76 E-value=2e+02 Score=25.12 Aligned_cols=94 Identities=6% Similarity=0.078 Sum_probs=47.3
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------C
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------K 228 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~ 228 (429)
...++||.|+...-..+...|.+.|..|++..-. ..........++..+..+- -|.+.+++.++. +
T Consensus 16 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~ 87 (266)
T 3p19_A 16 KKLVVITGASSGIGEAIARRFSEEGHPLLLLARR---VERLKALNLPNTLCAQVDV-----TDKYTFDTAITRAEKIYGP 87 (266)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESC---HHHHHTTCCTTEEEEECCT-----TCHHHHHHHHHHHHHHHCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHhhcCCceEEEecC-----CCHHHHHHHHHHHHHHCCC
Confidence 3457777766655555667788888777665422 1222222222344444432 266666665542 3
Q ss_pred CcEEEEcCCCCCccC--CCCHHHHHHHHHH
Q 014172 229 SRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 229 ~~~i~l~~p~NPtG~--~~~~~~l~~I~~~ 256 (429)
...++-+....+.+. ..+.++++++.++
T Consensus 88 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 117 (266)
T 3p19_A 88 ADAIVNNAGMMLLGQIDTQEANEWQRMFDV 117 (266)
T ss_dssp EEEEEECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 444443333332222 3466666665543
No 435
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=30.67 E-value=77 Score=28.43 Aligned_cols=17 Identities=6% Similarity=-0.091 Sum_probs=12.7
Q ss_pred HHHHHHcCCEEEEecCC
Q 014172 193 PEMARIADATPVILPTR 209 (429)
Q Consensus 193 ~~~~~~~g~~~~~v~~~ 209 (429)
...++..|++.+++|+.
T Consensus 37 ~~~i~~~G~N~VRi~~~ 53 (294)
T 2whl_A 37 IPAIAEQGANTIRIVLS 53 (294)
T ss_dssp HHHHHHTTCSEEEEEEC
T ss_pred HHHHHHcCCCEEEEEec
Confidence 34566789999999874
No 436
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=30.54 E-value=82 Score=33.28 Aligned_cols=76 Identities=8% Similarity=0.153 Sum_probs=51.8
Q ss_pred CCCCCChHHHHHHc-CCEEEEecCCCCCCCCCCHHHHHhhcc-cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCe
Q 014172 186 APFWVSYPEMARIA-DATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL 263 (429)
Q Consensus 186 ~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~e~l~~~l~-~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i 263 (429)
-|+|.+..++.... ++.+..+-+.+. .-++.++++++ ...+.+++.+-.- +..+.++|.++|+++ ++
T Consensus 550 vp~y~sv~ea~~~~p~~DlaVI~vP~~----~v~~av~ea~~~~Gvk~~Viis~Gf------~e~~~~~l~~~A~~~-g~ 618 (829)
T 3pff_A 550 IPVFKNMADAMRKHPEVDVLINFASLR----SAYDSTMETMNYAQIRTIAIIAEGI------PEALTRKLIKKADQK-GV 618 (829)
T ss_dssp EEEESSHHHHHHHCTTCCEEEECCCTT----THHHHHHHHTTSTTCCEEEECCSCC------CHHHHHHHHHHHHHH-TC
T ss_pred cccCCcHHHHhhccCCCcEEEEeCCHH----HHHHHHHHHHhhCCCCEEEEeCCCC------CHHHHHHHHHHHHHc-CC
Confidence 57888888877653 344444433222 36788999998 8899887655443 335678899999999 99
Q ss_pred EEEEccCCc
Q 014172 264 LVLSDEIYE 272 (429)
Q Consensus 264 ~vi~Deay~ 272 (429)
.||==.+.+
T Consensus 619 rliGPNc~G 627 (829)
T 3pff_A 619 TIIGPATVG 627 (829)
T ss_dssp EEECSSCCC
T ss_pred EEEcCCCcc
Confidence 998444433
No 437
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=30.42 E-value=1.4e+02 Score=25.66 Aligned_cols=97 Identities=11% Similarity=0.070 Sum_probs=51.5
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEc-CCCCCChH---HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc---
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIP-APFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~-~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--- 227 (429)
...++||.|+...-..+...|.+.|..|++. ...-.... ..++..+.++..+..+.. |.+.+++.+..
T Consensus 7 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~ 81 (255)
T 3icc_A 7 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLE-----SLHGVEALYSSLDN 81 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTT-----SHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcC-----CHHHHHHHHHHHHH
Confidence 3456777766655556677788889887663 33222222 223445777777766432 45555544321
Q ss_pred ---------CCcEEEEcCCCCCccC--CCCHHHHHHHHHH
Q 014172 228 ---------KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 228 ---------~~~~i~l~~p~NPtG~--~~~~~~l~~I~~~ 256 (429)
+...++.+....+.+. ..+.+++++..++
T Consensus 82 ~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 121 (255)
T 3icc_A 82 ELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSV 121 (255)
T ss_dssp HHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred HhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhh
Confidence 1344443333333332 2466666666554
No 438
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=30.40 E-value=1.3e+02 Score=26.00 Aligned_cols=97 Identities=10% Similarity=0.109 Sum_probs=49.6
Q ss_pred CCcEEEecChHHHHHHHHHHhcC---CCCEEEEcCCCCCChHHHHHHc-----CCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 155 PDQILVSNGAKQSILQAVLAVCS---PGDEVIIPAPFWVSYPEMARIA-----DATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~---~gd~Vlv~~p~y~~~~~~~~~~-----g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
...++||.|+...-..+...|.+ .|..|++..-.-.......... |.++..+..+-. |.+.+++.++
T Consensus 6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~ 80 (259)
T 1oaa_A 6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLG-----TEAGVQRLLS 80 (259)
T ss_dssp SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTT-----SHHHHHHHHH
T ss_pred CcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCC-----CHHHHHHHHH
Confidence 34567776665544556666777 7888776543222222222221 667777766432 5566655442
Q ss_pred ---c-----CCc-EEEEcCCCC--Cc-cC---CCCHHHHHHHHHH
Q 014172 227 ---E-----KSR-LLILCSPSN--PT-GS---VYPKNLLDEIARI 256 (429)
Q Consensus 227 ---~-----~~~-~i~l~~p~N--Pt-G~---~~~~~~l~~I~~~ 256 (429)
+ +.. .+++++..- +. +. ..+.++++++.++
T Consensus 81 ~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~ 125 (259)
T 1oaa_A 81 AVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWAL 125 (259)
T ss_dssp HHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHH
T ss_pred HHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHH
Confidence 1 222 145554421 11 11 1566777776654
No 439
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=30.39 E-value=55 Score=29.44 Aligned_cols=90 Identities=11% Similarity=0.042 Sum_probs=54.0
Q ss_pred EecChHHHHHHHHHHhcCCCCEEEEcCCC--CCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc--cCCcEEEEc
Q 014172 160 VSNGAKQSILQAVLAVCSPGDEVIIPAPF--WVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT--EKSRLLILC 235 (429)
Q Consensus 160 ~t~G~~~al~~~l~~l~~~gd~Vlv~~p~--y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~--~~~~~i~l~ 235 (429)
...+..+++...+.....+|..|+++... -......++..|+++..+++.....-..+.+.+.+.+. .+...|++.
T Consensus 138 p~~~~ae~L~~~l~~~~~~g~~vLi~rg~~~r~~L~~~L~~~G~~v~~~~~Y~~~~~~~~~~~~~~~l~~~~~~d~v~ft 217 (286)
T 1jr2_A 138 ETCGNAEKLAEYICSRESSALPLLFPCGNLKREILPKALKDKGIAMESITVYQTVAHPGIQGNLNSYYSQQGVPASITFF 217 (286)
T ss_dssp CSCSSHHHHHHHHHTSCCCSSCEEEEESCGGGCCHHHHHHTTTCCEEEEECEEEEECTTHHHHHHHHHHHHCSCSEEEES
T ss_pred CCccCHHHHHHHHHhcccCCCeEEEECChhhHHHHHHHHHHCCCeeEEEEEEEEeeCCCcHHHHHHHHHhCCCCCEEEEE
Confidence 34556666665555444468888888654 34567788889999988887532110012335555554 356677776
Q ss_pred CCCCCccCCCCHHHHHHHHHHHHh
Q 014172 236 SPSNPTGSVYPKNLLDEIARIVAK 259 (429)
Q Consensus 236 ~p~NPtG~~~~~~~l~~I~~~a~~ 259 (429)
+|+. ++.+.+.+.+
T Consensus 218 S~~~----------v~~f~~~~~~ 231 (286)
T 1jr2_A 218 SPSG----------LTYSLKHIQE 231 (286)
T ss_dssp SHHH----------HHHHHHHHHH
T ss_pred ChHH----------HHHHHHHHhh
Confidence 6542 6666666544
No 440
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=30.37 E-value=30 Score=33.63 Aligned_cols=28 Identities=7% Similarity=0.319 Sum_probs=24.8
Q ss_pred CCccCCCCHHHHHHHHHHHHhCCCeEEEE
Q 014172 239 NPTGSVYPKNLLDEIARIVAKHPRLLVLS 267 (429)
Q Consensus 239 NPtG~~~~~~~l~~I~~~a~~~~~i~vi~ 267 (429)
+|.|..++++++++|++.|+++ +|-||-
T Consensus 83 ~~~~~~YT~~di~eIv~YA~~r-gI~VIP 110 (434)
T 2yl6_A 83 DPNGNHLTESQMTDLINYAKDK-GIGLIP 110 (434)
T ss_dssp CTTCSCEEHHHHHHHHHHHHHT-TCEEEE
T ss_pred CCCCCccCHHHHHHHHHHHHHc-CCEEEE
Confidence 3567899999999999999999 998883
No 441
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=30.30 E-value=2.1e+02 Score=25.80 Aligned_cols=93 Identities=12% Similarity=-0.014 Sum_probs=49.6
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEE
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLI 233 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~ 233 (429)
....|+||.|+-..-..++..|++.|..|++..-.-.. .+++++..++ -|.+.+++++. +...|+
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl-------~d~~~~~~~~~-~~d~vi 82 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSL-------EDGQALSDAIM-GVSAVL 82 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCT-------TCHHHHHHHHT-TCSEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCc-------CCHHHHHHHHh-CCCEEE
Confidence 34578888775544455667777778666554322111 4455544443 27788888776 566666
Q ss_pred EcCC-CCCccCCCCHH-------HHHHHHHHHHhCCCe
Q 014172 234 LCSP-SNPTGSVYPKN-------LLDEIARIVAKHPRL 263 (429)
Q Consensus 234 l~~p-~NPtG~~~~~~-------~l~~I~~~a~~~~~i 263 (429)
-+.. ..+..... .+ -...+++.|+++ ++
T Consensus 83 h~A~~~~~~~~~~-~~~~~~nv~~~~~ll~a~~~~-~~ 118 (347)
T 4id9_A 83 HLGAFMSWAPADR-DRMFAVNVEGTRRLLDAASAA-GV 118 (347)
T ss_dssp ECCCCCCSSGGGH-HHHHHHHTHHHHHHHHHHHHT-TC
T ss_pred ECCcccCcchhhH-HHHHHHHHHHHHHHHHHHHHc-CC
Confidence 4333 22221110 11 125678888887 54
No 442
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=30.25 E-value=1.1e+02 Score=27.92 Aligned_cols=92 Identities=10% Similarity=-0.018 Sum_probs=52.3
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEE-EcCCCCCC--hH---HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc-C
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVI-IPAPFWVS--YP---EMARIADATPVILPTRISENFLLDPKVLESKLTE-K 228 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vl-v~~p~y~~--~~---~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-~ 228 (429)
..|+||.|+-..-..++..|++.|..|. +....-.. -. ......|++++..++ -|.+.+.+++.. +
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl-------~d~~~l~~~~~~~~ 83 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLI-------NEQEAMEKILKEHE 83 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCT-------TCHHHHHHHHHHTT
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeec-------CCHHHHHHHHhhCC
Confidence 4688887643333445666766675444 43332111 11 123346777776655 278888888863 5
Q ss_pred CcEEEEcCC-CCCccCCCCHHHHHHHHHHHHhCCC
Q 014172 229 SRLLILCSP-SNPTGSVYPKNLLDEIARIVAKHPR 262 (429)
Q Consensus 229 ~~~i~l~~p-~NPtG~~~~~~~l~~I~~~a~~~~~ 262 (429)
...|+.+.. .|..| -..|++.|++. +
T Consensus 84 ~d~Vi~~a~~~n~~~-------~~~l~~aa~~~-g 110 (346)
T 3i6i_A 84 IDIVVSTVGGESILD-------QIALVKAMKAV-G 110 (346)
T ss_dssp CCEEEECCCGGGGGG-------HHHHHHHHHHH-C
T ss_pred CCEEEECCchhhHHH-------HHHHHHHHHHc-C
Confidence 666664433 33332 46788888887 6
No 443
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=30.08 E-value=2.6e+02 Score=25.53 Aligned_cols=88 Identities=11% Similarity=0.234 Sum_probs=47.4
Q ss_pred cEEEecC---hHHHHHHHHHHhcCCC-CEEEEcCCCCCChHH--HHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCc
Q 014172 157 QILVSNG---AKQSILQAVLAVCSPG-DEVIIPAPFWVSYPE--MARIADATPVILPTRISENFLLDPKVLESKLTEKSR 230 (429)
Q Consensus 157 ~i~~t~G---~~~al~~~l~~l~~~g-d~Vlv~~p~y~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~ 230 (429)
-|++..| ..+++.++- ...+-| |.|++..|.|....+ ..+ -...+.+.. +.-
T Consensus 93 pViaGvg~~st~~ai~la~-~A~~~Gadavlv~~P~y~~~~~~~l~~-------------------~f~~va~a~--~lP 150 (315)
T 3si9_A 93 PVVAGAGSNSTSEAVELAK-HAEKAGADAVLVVTPYYNRPNQRGLYT-------------------HFSSIAKAI--SIP 150 (315)
T ss_dssp CBEEECCCSSHHHHHHHHH-HHHHTTCSEEEEECCCSSCCCHHHHHH-------------------HHHHHHHHC--SSC
T ss_pred cEEEeCCCCCHHHHHHHHH-HHHhcCCCEEEECCCCCCCCCHHHHHH-------------------HHHHHHHcC--CCC
Confidence 3666655 455555443 333445 889999998753110 000 012222221 334
Q ss_pred EEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccC
Q 014172 231 LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 270 (429)
Q Consensus 231 ~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Dea 270 (429)
+++.+.|.. ||..++.+. +.++++++|++.=|=|..
T Consensus 151 iilYn~P~~-tg~~l~~~~---~~~La~~~pnIvgiKdss 186 (315)
T 3si9_A 151 IIIYNIPSR-SVIDMAVET---MRDLCRDFKNIIGVKDAT 186 (315)
T ss_dssp EEEEECHHH-HSCCCCHHH---HHHHHHHCTTEEEEEECS
T ss_pred EEEEeCchh-hCCCCCHHH---HHHHHhhCCCEEEEEeCC
Confidence 555566653 788888554 445555567777776654
No 444
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=29.94 E-value=2.1e+02 Score=26.28 Aligned_cols=71 Identities=10% Similarity=0.045 Sum_probs=43.3
Q ss_pred cCCCCEEEEcCCCCCC-------h---HHHHHHcCCEEEEecCCCCCCCCC---C---HHHHHhhcc-cCCcEEEEcCCC
Q 014172 176 CSPGDEVIIPAPFWVS-------Y---PEMARIADATPVILPTRISENFLL---D---PKVLESKLT-EKSRLLILCSPS 238 (429)
Q Consensus 176 ~~~gd~Vlv~~p~y~~-------~---~~~~~~~g~~~~~v~~~~~~~~~~---d---~e~l~~~l~-~~~~~i~l~~p~ 238 (429)
+++||+|-+..|+... + ...++..|.+++.-+.-......+ | .++|.+++. +..++|+-....
T Consensus 9 L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGG 88 (327)
T 4h1h_A 9 LKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGG 88 (327)
T ss_dssp CCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred CCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCCc
Confidence 6789999999998652 1 234567899998876432221111 2 455555554 567888765555
Q ss_pred CCccCCCC
Q 014172 239 NPTGSVYP 246 (429)
Q Consensus 239 NPtG~~~~ 246 (429)
.-+-.+++
T Consensus 89 ~g~~rlL~ 96 (327)
T 4h1h_A 89 FNSNQLLP 96 (327)
T ss_dssp SCGGGGGG
T ss_pred hhHHHHhh
Confidence 54545554
No 445
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=29.88 E-value=2.1e+02 Score=24.76 Aligned_cols=49 Identities=12% Similarity=0.078 Sum_probs=23.4
Q ss_pred cEEEe-cChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHH-HHcCCEEEEecC
Q 014172 157 QILVS-NGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA-RIADATPVILPT 208 (429)
Q Consensus 157 ~i~~t-~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~-~~~g~~~~~v~~ 208 (429)
+|.+. .+..+++..+-..+-..|..|++..- +....+ +..+..++.+++
T Consensus 40 ~I~vi~~~le~av~~a~~~~~~~~~dVIISRG---gta~~Lr~~~~iPVV~I~v 90 (225)
T 2pju_A 40 NITPIQLGFEKAVTYIRKKLANERCDAIIAAG---SNGAYLKSRLSVPVILIKP 90 (225)
T ss_dssp EEEEECCCHHHHHHHHHHHTTTSCCSEEEEEH---HHHHHHHTTCSSCEEEECC
T ss_pred eEEEecCcHHHHHHHHHHHHhcCCCeEEEeCC---hHHHHHHhhCCCCEEEecC
Confidence 34443 34555666443332223444666653 222222 335667777765
No 446
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=29.81 E-value=1.8e+02 Score=23.55 Aligned_cols=93 Identities=13% Similarity=0.087 Sum_probs=52.1
Q ss_pred HHHHHHHHHHhcCC--CCEEEEcCCCCCChHHHHHH-cCCEEEEecCCCCCCCCCCHHHHHhhccc-CCcEEEEcCCCCC
Q 014172 165 KQSILQAVLAVCSP--GDEVIIPAPFWVSYPEMARI-ADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNP 240 (429)
Q Consensus 165 ~~al~~~l~~l~~~--gd~Vlv~~p~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~p~NP 240 (429)
...+......+.+- |=+++... +....++. .|+++..+.--++++ ++ .+.+.+.. +..+|+ +.| .|
T Consensus 23 K~~~v~~ak~~~~ll~Gf~l~AT~----gTa~~L~e~~Gl~v~~v~k~~eGG---~p-~I~d~I~~geIdlVI-nt~-~p 92 (152)
T 1b93_A 23 KQMLMSWVERHQPLLEQHVLYATG----TTGNLISRATGMNVNAMLSGPMGG---DQ-QVGALISEGKIDVLI-FFW-DP 92 (152)
T ss_dssp HHHHHHHHHHTHHHHTTSEEEEET----THHHHHHHHHCCCCEEECCGGGTH---HH-HHHHHHHTTCCCEEE-EEC-CT
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcc----HHHHHHHHHhCceeEEEEecCCCC---Cc-hHHHHHHCCCccEEE-EcC-Cc
Confidence 34444444444443 55555443 33444444 677777775323322 33 45555554 455544 334 34
Q ss_pred ccCCCCHHHHHHHHHHHHhCCCeEEEEc
Q 014172 241 TGSVYPKNLLDEIARIVAKHPRLLVLSD 268 (429)
Q Consensus 241 tG~~~~~~~l~~I~~~a~~~~~i~vi~D 268 (429)
.|......+...|.+.|-.| ++.++.-
T Consensus 93 l~~~~h~~D~~~IrR~A~~~-~IP~~T~ 119 (152)
T 1b93_A 93 LNAVPHDPDVKALLRLATVW-NIPVATN 119 (152)
T ss_dssp TSCCTTHHHHHHHHHHHHHT-TCCEESS
T ss_pred ccCCcccccHHHHHHHHHHc-CCCEEeC
Confidence 45332267899999999999 9988854
No 447
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=29.75 E-value=2.4e+02 Score=23.60 Aligned_cols=63 Identities=8% Similarity=0.003 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCcE-EEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHH-HHcCCEEEEecC
Q 014172 135 LELRSAICHKLKEENGLSYTPDQI-LVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA-RIADATPVILPT 208 (429)
Q Consensus 135 ~~lr~~ia~~l~~~~g~~~~~~~i-~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~-~~~g~~~~~v~~ 208 (429)
++|++.+.+... .++. ++ +...+-.+++..+-. + +.|..|++..- +....+ +..+..++.+++
T Consensus 14 ~~l~~~~~~i~~-e~~~-----~i~i~~~~l~~~v~~a~~-~-~~~~dVIISRG---gta~~lr~~~~iPVV~I~~ 78 (196)
T 2q5c_A 14 ENLLNLFPKLAL-EKNF-----IPITKTASLTRASKIAFG-L-QDEVDAIISRG---ATSDYIKKSVSIPSISIKV 78 (196)
T ss_dssp HHHHHHHHHHHH-HHTC-----EEEEEECCHHHHHHHHHH-H-TTTCSEEEEEH---HHHHHHHTTCSSCEEEECC
T ss_pred HHHHHHHHHHHh-hhCC-----ceEEEECCHHHHHHHHHH-h-cCCCeEEEECC---hHHHHHHHhCCCCEEEEcC
Confidence 556664444333 3331 23 344556667765444 4 66656777763 223333 345677777775
No 448
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=29.75 E-value=3.2e+02 Score=24.83 Aligned_cols=87 Identities=11% Similarity=0.291 Sum_probs=45.7
Q ss_pred cEEEecC---hHHHHHHHHHHhcCCC-CEEEEcCCCCCChHH--HHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCc
Q 014172 157 QILVSNG---AKQSILQAVLAVCSPG-DEVIIPAPFWVSYPE--MARIADATPVILPTRISENFLLDPKVLESKLTEKSR 230 (429)
Q Consensus 157 ~i~~t~G---~~~al~~~l~~l~~~g-d~Vlv~~p~y~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~ 230 (429)
-|++..| ..+++.++-. .-+-| |.|++..|.|....+ ..+ -.+.+.++. +.-
T Consensus 94 pViaGvg~~st~eai~la~~-A~~~Gadavlv~~P~y~~~s~~~l~~-------------------~f~~va~a~--~lP 151 (314)
T 3qze_A 94 PVIAGTGANSTREAVALTEA-AKSGGADACLLVTPYYNKPTQEGMYQ-------------------HFRHIAEAV--AIP 151 (314)
T ss_dssp CEEEECCCSSHHHHHHHHHH-HHHTTCSEEEEECCCSSCCCHHHHHH-------------------HHHHHHHHS--CSC
T ss_pred cEEEeCCCcCHHHHHHHHHH-HHHcCCCEEEEcCCCCCCCCHHHHHH-------------------HHHHHHHhc--CCC
Confidence 4777666 4566664433 33444 889998888753110 000 012222221 334
Q ss_pred EEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccC
Q 014172 231 LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 270 (429)
Q Consensus 231 ~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Dea 270 (429)
+++.+.|.. ||..++.+.+.+| + ++|++.=|=|..
T Consensus 152 iilYn~P~~-tg~~l~~~~~~~L---a-~~pnIvgiKdss 186 (314)
T 3qze_A 152 QILYNVPGR-TSCDMLPETVERL---S-KVPNIIGIKEAT 186 (314)
T ss_dssp EEEEECHHH-HSCCCCHHHHHHH---H-TSTTEEEEEECS
T ss_pred EEEEeCccc-cCCCCCHHHHHHH---h-cCCCEEEEEcCC
Confidence 555555543 7888885554444 4 356777676643
No 449
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=29.52 E-value=1.8e+02 Score=25.54 Aligned_cols=90 Identities=13% Similarity=0.122 Sum_probs=45.5
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------ 227 (429)
....|+||.|+...-..+...|.+.|..|++..-.-... ......+.+++ -|.+.+++.+..
T Consensus 13 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~Dv-------~~~~~v~~~~~~~~~~~g 80 (269)
T 3vtz_A 13 TDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD-----VNVSDHFKIDV-------TNEEEVKEAVEKTTKKYG 80 (269)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C-----TTSSEEEECCT-------TCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc-----cCceeEEEecC-------CCHHHHHHHHHHHHHHcC
Confidence 445677776666555556677788898877654221111 11233333333 256666665542
Q ss_pred CCcEEEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 228 KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
+...++-+....+.+ ...+.++++++.+
T Consensus 81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 110 (269)
T 3vtz_A 81 RIDILVNNAGIEQYSPLHLTPTEIWRRIID 110 (269)
T ss_dssp CCCEEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 455555433322222 2346666665444
No 450
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=29.23 E-value=1.5e+02 Score=26.55 Aligned_cols=117 Identities=9% Similarity=0.075 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCcEEEecChHHHHHHHHHHhcCCC--CEEEEc--CCCCCChHHHHH--HcCCEEEEecC
Q 014172 135 LELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPG--DEVIIP--APFWVSYPEMAR--IADATPVILPT 208 (429)
Q Consensus 135 ~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~g--d~Vlv~--~p~y~~~~~~~~--~~g~~~~~v~~ 208 (429)
.+..+.|+++-.+. +....+++|.|.+.....+++.+.+.| -+|++. .|.+.+...+.+ ..|.++..++-
T Consensus 93 ~~~~~~Ia~~a~~~----I~~g~~IlT~~~s~Tv~~~l~~a~~~~~~~~V~v~etrP~~qG~~~a~~L~~~gI~vtli~d 168 (276)
T 1vb5_A 93 EEAKRELASIGAQL----IDDGDVIITHSFSSTVLEIIRTAKERKKRFKVILTESSPDYEGLHLARELEFSGIEFEVITD 168 (276)
T ss_dssp HHHHHHHHHHHHHH----CCTTEEEECCSCCHHHHHHHHHHHHTTCCEEEEEECCTTTTHHHHHHHHHHHTTCCEEEECG
T ss_pred HHHHHHHHHHHHHH----ccCCCEEEEeCCChHHHHHHHHHHHcCCeEEEEEeCCCcchhhHHHHHHHHHCCCCEEEEcH
Confidence 45566676665544 345566776553333334555554333 467773 366655333222 36888888762
Q ss_pred CCCCCCCCCHHHHHhhcccCCcEEEE-cCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEE
Q 014172 209 RISENFLLDPKVLESKLTEKSRLLIL-CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 267 (429)
Q Consensus 209 ~~~~~~~~d~e~l~~~l~~~~~~i~l-~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~ 267 (429)
+ -... .+ ++...+++ ..--...|.++++----.++..|++| ++.+++
T Consensus 169 ---s----a~~~---~m-~~vd~vivGAd~i~~nG~v~nkiGt~~iA~~A~~~-~vp~~V 216 (276)
T 1vb5_A 169 ---A----QMGL---FC-REASIAIVGADMITKDGYVVNKAGTYLLALACHEN-AIPFYV 216 (276)
T ss_dssp ---G----GHHH---HH-TTCSEEEECCSEECTTSCEEEETTHHHHHHHHHHT-TCCEEE
T ss_pred ---H----HHHH---HH-ccCCEEEEcccEEecCCCEeechhHHHHHHHHHHc-CCCEEE
Confidence 1 1111 22 24555555 22223445555554456678888888 666554
No 451
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=28.93 E-value=1e+02 Score=28.58 Aligned_cols=19 Identities=16% Similarity=0.102 Sum_probs=14.5
Q ss_pred hHHHHHHcCCEEEEecCCC
Q 014172 192 YPEMARIADATPVILPTRI 210 (429)
Q Consensus 192 ~~~~~~~~g~~~~~v~~~~ 210 (429)
....++..|++.+++|+..
T Consensus 47 di~~i~~~G~n~vRipi~w 65 (345)
T 3ndz_A 47 MINKIKEAGFNTLRLPVTW 65 (345)
T ss_dssp HHHHHHHHTCCEEEECCCC
T ss_pred HHHHHHHCCCCEEEEeeeh
Confidence 3456778899999999853
No 452
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=28.74 E-value=3.1e+02 Score=24.56 Aligned_cols=84 Identities=14% Similarity=0.240 Sum_probs=46.8
Q ss_pred cEEEecCh---HHHHHHHHHHhcCCC-CEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhc----cc-
Q 014172 157 QILVSNGA---KQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL----TE- 227 (429)
Q Consensus 157 ~i~~t~G~---~~al~~~l~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l----~~- 227 (429)
-|++..|+ .+++.+ .+..-+-| |-|++..|.|... +.+.+.+.+ +.
T Consensus 72 pviaGvg~~~t~~ai~l-a~~a~~~Gadavlv~~P~y~~~------------------------s~~~l~~~f~~ia~a~ 126 (292)
T 2ojp_A 72 PVIAGTGANATAEAISL-TQRFNDSGIVGCLTVTPYYNRP------------------------SQEGLYQHFKAIAEHT 126 (292)
T ss_dssp CEEEECCCSSHHHHHHH-HHHTTTSSCSEEEEECCCSSCC------------------------CHHHHHHHHHHHHTTC
T ss_pred cEEEecCCccHHHHHHH-HHHHHhcCCCEEEECCCCCCCC------------------------CHHHHHHHHHHHHHhc
Confidence 37777664 555553 34444556 8899999988531 112222111 11
Q ss_pred CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccC
Q 014172 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 270 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Dea 270 (429)
+.-+++.+.|. .||..++.+.+.+|+ ++|++.=|=|..
T Consensus 127 ~lPiilYn~P~-~tg~~l~~~~~~~La----~~pnivgiK~s~ 164 (292)
T 2ojp_A 127 DLPQILYNVPS-RTGCDLLPETVGRLA----KVKNIIGIXEAT 164 (292)
T ss_dssp SSCEEEECCHH-HHSCCCCHHHHHHHH----TSTTEEEC-CCS
T ss_pred CCCEEEEeCcc-hhccCCCHHHHHHHH----cCCCEEEEeCCC
Confidence 23355556665 489999966655554 356777666644
No 453
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=28.66 E-value=1.6e+02 Score=26.03 Aligned_cols=97 Identities=16% Similarity=0.089 Sum_probs=48.1
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHH----cCCEEEEecCCCCCCCCCCHHHHHhhccc---
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI----ADATPVILPTRISENFLLDPKVLESKLTE--- 227 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--- 227 (429)
...++||.|+...-..+...|.+.|..|++..-.-.......+. .+..+..+..|- -|.+.+++.++.
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 107 (281)
T 4dry_A 33 GRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDV-----GDPDQVAALFAAVRA 107 (281)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 34566666655444555667778898887765332222222221 222234444432 256666655532
Q ss_pred ---CCcEEEEcCCCC-Ccc--CCCCHHHHHHHHHH
Q 014172 228 ---KSRLLILCSPSN-PTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 ---~~~~i~l~~p~N-PtG--~~~~~~~l~~I~~~ 256 (429)
+...++-+.... +.+ ...+.++++++.++
T Consensus 108 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~v 142 (281)
T 4dry_A 108 EFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAA 142 (281)
T ss_dssp HHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHH
Confidence 455555433322 111 22566777776654
No 454
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=28.55 E-value=1.5e+02 Score=25.76 Aligned_cols=65 Identities=14% Similarity=0.118 Sum_probs=36.1
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCCCCHHHHHhhc
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKL 225 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l 225 (429)
..++||.|+...-..+...|.+.|..|++..-.-...... ++..|.++..+..+- -|.+.+++.+
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~ 73 (260)
T 2qq5_A 6 QVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDS-----SQESEVRSLF 73 (260)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCT-----TSHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCC-----CCHHHHHHHH
Confidence 4566776655544556677788898877654321111222 223366777776543 2556665544
No 455
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=28.53 E-value=2.5e+02 Score=24.81 Aligned_cols=93 Identities=12% Similarity=0.068 Sum_probs=49.1
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcC
Q 014172 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS 236 (429)
Q Consensus 157 ~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~ 236 (429)
.|+||.|+-..-..++..|++.|..|.+..-. ..... .. +++++..++ ..+.+.+++. +...|+-+.
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~-~~--~~~~~~~Dl--------~~~~~~~~~~-~~d~Vih~a 70 (311)
T 3m2p_A 4 KIAVTGGTGFLGQYVVESIKNDGNTPIILTRS-IGNKA-IN--DYEYRVSDY--------TLEDLINQLN-DVDAVVHLA 70 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-CC--------CCEEEECCC--------CHHHHHHHTT-TCSEEEECC
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCEEEEEeCC-CCccc-CC--ceEEEEccc--------cHHHHHHhhc-CCCEEEEcc
Confidence 57777664444445667777788777665443 33332 22 555554432 2677777776 566666443
Q ss_pred CCCCccCC-----CCHHHHHHHHHHHHhCCCe
Q 014172 237 PSNPTGSV-----YPKNLLDEIARIVAKHPRL 263 (429)
Q Consensus 237 p~NPtG~~-----~~~~~l~~I~~~a~~~~~i 263 (429)
.....+.. ....-...+++.|++. ++
T Consensus 71 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~ 101 (311)
T 3m2p_A 71 ATRGSQGKISEFHDNEILTQNLYDACYEN-NI 101 (311)
T ss_dssp CCCCSSSCGGGTHHHHHHHHHHHHHHHHT-TC
T ss_pred ccCCCCChHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 32211100 0111246788888887 53
No 456
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=28.34 E-value=50 Score=26.24 Aligned_cols=41 Identities=22% Similarity=0.246 Sum_probs=26.6
Q ss_pred HHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCc
Q 014172 221 LESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE 272 (429)
Q Consensus 221 l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~ 272 (429)
+++++....+.+++.. |.. -+++.++|+++ ++.+|-+.+..
T Consensus 87 ~~~~~~~gi~~i~~~~-----g~~-----~~~~~~~a~~~-Gir~vgpnc~g 127 (140)
T 1iuk_A 87 LPEVLALRPGLVWLQS-----GIR-----HPEFEKALKEA-GIPVVADRCLM 127 (140)
T ss_dssp HHHHHHHCCSCEEECT-----TCC-----CHHHHHHHHHT-TCCEEESCCHH
T ss_pred HHHHHHcCCCEEEEcC-----CcC-----HHHHHHHHHHc-CCEEEcCCccc
Confidence 3344444667776532 221 26788999999 99999877654
No 457
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=28.26 E-value=1.6e+02 Score=24.65 Aligned_cols=95 Identities=11% Similarity=-0.003 Sum_probs=48.8
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEc
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC 235 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~ 235 (429)
..|++|.|+...-..++..|++.|..|.+..-.-... ......+..+..+. .|.+.+++++. +..+|+.+
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~~~~Dl-----~d~~~~~~~~~-~~d~vi~~ 74 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI----KIENEHLKVKKADV-----SSLDEVCEVCK-GADAVISA 74 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGC----CCCCTTEEEECCCT-----TCHHHHHHHHT-TCSEEEEC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccc----hhccCceEEEEecC-----CCHHHHHHHhc-CCCEEEEe
Confidence 4688887655555567778888887776654321110 00112333343321 37888888876 46666643
Q ss_pred CCCCCcc-CCC--CHHHHHHHHHHHHhC
Q 014172 236 SPSNPTG-SVY--PKNLLDEIARIVAKH 260 (429)
Q Consensus 236 ~p~NPtG-~~~--~~~~l~~I~~~a~~~ 260 (429)
....... ..+ ...-...+++.|++.
T Consensus 75 a~~~~~~~~~~~~n~~~~~~l~~~~~~~ 102 (227)
T 3dhn_A 75 FNPGWNNPDIYDETIKVYLTIIDGVKKA 102 (227)
T ss_dssp CCC------CCSHHHHHHHHHHHHHHHT
T ss_pred CcCCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 3211000 011 122345667777765
No 458
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=27.96 E-value=2.9e+02 Score=23.71 Aligned_cols=90 Identities=17% Similarity=0.167 Sum_probs=46.8
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEE
Q 014172 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLI 233 (429)
Q Consensus 154 ~~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~ 233 (429)
....+++|.|+...-..+...|.+.|..|++..-.- ...+..+ ++..+ .+-. -+++.+.+.+. +...++
T Consensus 18 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~----~~~~~~~-~~~~~-~D~~----~~~~~~~~~~~-~iD~lv 86 (249)
T 1o5i_A 18 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE----ELLKRSG-HRYVV-CDLR----KDLDLLFEKVK-EVDILV 86 (249)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH----HHHHHTC-SEEEE-CCTT----TCHHHHHHHSC-CCSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH----HHHHhhC-CeEEE-eeHH----HHHHHHHHHhc-CCCEEE
Confidence 445677777766555566777788898776654221 2333334 33333 4321 15666655554 456655
Q ss_pred EcCCCCCcc--CCCCHHHHHHHH
Q 014172 234 LCSPSNPTG--SVYPKNLLDEIA 254 (429)
Q Consensus 234 l~~p~NPtG--~~~~~~~l~~I~ 254 (429)
-+....+.+ ...+.+++++..
T Consensus 87 ~~Ag~~~~~~~~~~~~~~~~~~~ 109 (249)
T 1o5i_A 87 LNAGGPKAGFFDELTNEDFKEAI 109 (249)
T ss_dssp ECCCCCCCBCGGGCCHHHHHHHH
T ss_pred ECCCCCCCCChhhCCHHHHHHHH
Confidence 443322222 224556665543
No 459
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=27.86 E-value=1.2e+02 Score=28.30 Aligned_cols=57 Identities=18% Similarity=0.338 Sum_probs=37.4
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCcEE-Eec--------ChHHHHHHHHHHhc---CCCCEEEEcCCCCC
Q 014172 132 AGTLELRSAICHKLKEENGLSYTPDQIL-VSN--------GAKQSILQAVLAVC---SPGDEVIIPAPFWV 190 (429)
Q Consensus 132 ~G~~~lr~~ia~~l~~~~g~~~~~~~i~-~t~--------G~~~al~~~l~~l~---~~gd~Vlv~~p~y~ 190 (429)
.|...--+.++++|.+.+| +.+++|. ++. -+.+.|..++..|+ ++||.+++-=-.|.
T Consensus 71 ~g~vnDA~~m~~~L~~~~G--f~~~~I~lLtd~~~~~~~~pTr~nI~~aL~~L~~~a~pgD~llfYFSGHG 139 (350)
T 4f6o_A 71 RGCINDAHNIFNFLTNGYG--YSSDDIVILTDDQNDLVRVPTRANMIRAMQWLVKDAQPNDSLFLHYSGHG 139 (350)
T ss_dssp SSHHHHHHHHHHHHHHHSC--CCGGGEEEEETTSSCGGGSCCHHHHHHHHHHHHTTCCTTCEEEEEEESCE
T ss_pred CCHHHHHHHHHHHHHHhcC--CCccceeeecccccccccCCCHHHHHHHHHHHHHhCCCCCEEEEEEcCCc
Confidence 4455666678888887777 4556664 454 25677777777774 47898887654444
No 460
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=27.79 E-value=1.9e+02 Score=27.28 Aligned_cols=72 Identities=8% Similarity=-0.065 Sum_probs=44.0
Q ss_pred cCCCCEEEEcCCCCCCh----------HHHHHHcCCEEEEecCCCCC-CC--CCC---HHHHHhhcc-cCCcEEEEcCCC
Q 014172 176 CSPGDEVIIPAPFWVSY----------PEMARIADATPVILPTRISE-NF--LLD---PKVLESKLT-EKSRLLILCSPS 238 (429)
Q Consensus 176 ~~~gd~Vlv~~p~y~~~----------~~~~~~~g~~~~~v~~~~~~-~~--~~d---~e~l~~~l~-~~~~~i~l~~p~ 238 (429)
+++||+|-+..|+.+.. ...++..|.+++.-+.-... ++ +-| .++|.+++. +..++|+-.-..
T Consensus 40 Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rGG 119 (371)
T 3tla_A 40 LAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGG 119 (371)
T ss_dssp CCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCCC
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 57899999999987642 23455689999887653221 11 112 455555655 567888765555
Q ss_pred CCccCCCCH
Q 014172 239 NPTGSVYPK 247 (429)
Q Consensus 239 NPtG~~~~~ 247 (429)
.-+-.+++.
T Consensus 120 yga~rlLp~ 128 (371)
T 3tla_A 120 DNSNSLLPF 128 (371)
T ss_dssp SCGGGGGGG
T ss_pred ccHHHHHhh
Confidence 545455543
No 461
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=27.71 E-value=3.3e+02 Score=24.37 Aligned_cols=88 Identities=11% Similarity=0.249 Sum_probs=46.6
Q ss_pred cEEEecCh---HHHHHHHHHHhcCCC-CEEEEcCCCCCChH--HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCc
Q 014172 157 QILVSNGA---KQSILQAVLAVCSPG-DEVIIPAPFWVSYP--EMARIADATPVILPTRISENFLLDPKVLESKLTEKSR 230 (429)
Q Consensus 157 ~i~~t~G~---~~al~~~l~~l~~~g-d~Vlv~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~ 230 (429)
-|++..|+ .+++.++-.+ -+-| |-|++..|.|.... ...+ -...+.++. +.-
T Consensus 71 pviaGvg~~~t~~ai~la~~A-~~~Gadavlv~~P~y~~~s~~~l~~-------------------~f~~va~a~--~lP 128 (294)
T 2ehh_A 71 KVIAGTGGNATHEAVHLTAHA-KEVGADGALVVVPYYNKPTQRGLYE-------------------HFKTVAQEV--DIP 128 (294)
T ss_dssp EEEEECCCSCHHHHHHHHHHH-HHTTCSEEEEECCCSSCCCHHHHHH-------------------HHHHHHHHC--CSC
T ss_pred cEEEecCCCCHHHHHHHHHHH-HhcCCCEEEECCCCCCCCCHHHHHH-------------------HHHHHHHhc--CCC
Confidence 37776664 5666644333 3445 88998889885311 0000 011222221 234
Q ss_pred EEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccC
Q 014172 231 LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 270 (429)
Q Consensus 231 ~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Dea 270 (429)
+++.+.|.. ||..++.+.+.+| ++++|++.=|=|..
T Consensus 129 iilYn~P~~-tg~~l~~~~~~~L---a~~~pnivgiKds~ 164 (294)
T 2ehh_A 129 IIIYNIPSR-TCVEISVDTMFKL---ASECENIVASKEST 164 (294)
T ss_dssp EEEEECHHH-HSCCCCHHHHHHH---HHHCTTEEEEEECC
T ss_pred EEEEeCCcc-cCcCCCHHHHHHH---HhhCCCEEEEEeCC
Confidence 555566653 8888885554444 43456776666544
No 462
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=27.59 E-value=1.4e+02 Score=26.10 Aligned_cols=31 Identities=13% Similarity=0.218 Sum_probs=20.5
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcC
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPA 186 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~ 186 (429)
..++||.|+...-..+...|.+.|..|++..
T Consensus 12 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~ 42 (276)
T 1mxh_A 12 PAAVITGGARRIGHSIAVRLHQQGFRVVVHY 42 (276)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 3567776665544556677778898877654
No 463
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=27.58 E-value=1.6e+02 Score=25.44 Aligned_cols=66 Identities=18% Similarity=0.156 Sum_probs=34.4
Q ss_pred CcEEEecChHHHHHHHHHHhcC-CCCEEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 156 DQILVSNGAKQSILQAVLAVCS-PGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~-~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
..|+||.|+...-..+...|.+ .|..|++..-.-...... ++..|.++..+..+- -|.+.+++.+.
T Consensus 5 k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-----~~~~~~~~~~~ 74 (276)
T 1wma_A 5 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDI-----DDLQSIRALRD 74 (276)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCT-----TCHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCC-----CCHHHHHHHHH
Confidence 4567776655544556667777 787777654321111222 222354555555432 25666666554
No 464
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=27.49 E-value=1.1e+02 Score=24.28 Aligned_cols=44 Identities=7% Similarity=0.163 Sum_probs=28.9
Q ss_pred HHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCCc
Q 014172 218 PKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE 272 (429)
Q Consensus 218 ~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay~ 272 (429)
.+.+++++....+.+++. + |.. -+++.+.|+++ |+.+|-+.+..
T Consensus 91 ~~vv~~~~~~gi~~i~~~-~----g~~-----~~~l~~~a~~~-Gi~vvGpnc~g 134 (144)
T 2d59_A 91 MEYVEQAIKKGAKVVWFQ-Y----NTY-----NREASKKADEA-GLIIVANRCMM 134 (144)
T ss_dssp HHHHHHHHHHTCSEEEEC-T----TCC-----CHHHHHHHHHT-TCEEEESCCHH
T ss_pred HHHHHHHHHcCCCEEEEC-C----Cch-----HHHHHHHHHHc-CCEEEcCCchh
Confidence 444555555577777653 2 322 36788899999 99998776643
No 465
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=27.47 E-value=64 Score=27.66 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=26.8
Q ss_pred CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEE
Q 014172 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 267 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~ 267 (429)
.+.+++..-..|+.|..+. +.++.+++++| ++.+|.
T Consensus 159 ~Pa~vicEi~~~~dG~mar---~~~l~~fA~~h-~l~iit 194 (204)
T 1tks_A 159 QPAGVICELVRDEDGLMMR---LDDCIQFGKKH-GIKIIN 194 (204)
T ss_dssp CSBEEEEEBBCTTTCCBCB---HHHHHHHHHHH-TCCEEE
T ss_pred CceEEEEEEeECCCCCcCC---HHHHHHHHHHc-CCcEEE
Confidence 4555543333488899998 88889999999 888874
No 466
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=27.35 E-value=2.3e+02 Score=24.27 Aligned_cols=32 Identities=13% Similarity=0.060 Sum_probs=21.5
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcC
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPA 186 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~ 186 (429)
...++||.|+...-..+...|++.|..|++..
T Consensus 7 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~ 38 (264)
T 2pd6_A 7 SALALVTGAGSGIGRAVSVRLAGEGATVAACD 38 (264)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 34677776665555556677778888777654
No 467
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=27.02 E-value=1e+02 Score=26.61 Aligned_cols=93 Identities=14% Similarity=0.051 Sum_probs=44.9
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCC-EEEEecCCCCCCCCCCHHHHHhhccc--CCcE
Q 014172 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA-TPVILPTRISENFLLDPKVLESKLTE--KSRL 231 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~-~~~~v~~~~~~~~~~d~e~l~~~l~~--~~~~ 231 (429)
...+++|.|+...-..+...|.+.|..|++..-. -......... ++..+..+- -|.+.+++.+.. +...
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~id~ 77 (246)
T 2ag5_A 6 GKVIILTAAAQGIGQAAALAFAREGAKVIATDIN---ESKLQELEKYPGIQTRVLDV-----TKKKQIDQFANEVERLDV 77 (246)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHGGGGGSTTEEEEECCT-----TCHHHHHHHHHHCSCCSE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHhccCceEEEeeC-----CCHHHHHHHHHHhCCCCE
Confidence 3456777665554455667778889887765422 1111111100 333444322 256666654432 4555
Q ss_pred EEEcCCCCCcc--CCCCHHHHHHHHH
Q 014172 232 LILCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 232 i~l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
++-+......+ ...+.++++++.+
T Consensus 78 lv~~Ag~~~~~~~~~~~~~~~~~~~~ 103 (246)
T 2ag5_A 78 LFNVAGFVHHGTVLDCEEKDWDFSMN 103 (246)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred EEECCccCCCCCcccCCHHHHHHHHH
Confidence 55433322222 1245666665544
No 468
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=26.97 E-value=1.3e+02 Score=26.47 Aligned_cols=67 Identities=13% Similarity=0.108 Sum_probs=34.6
Q ss_pred CCcEEEecC--hHHHHHHHHHHhcCCCCEEEEcCCCCCC-hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc
Q 014172 155 PDQILVSNG--AKQSILQAVLAVCSPGDEVIIPAPFWVS-YPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (429)
Q Consensus 155 ~~~i~~t~G--~~~al~~~l~~l~~~gd~Vlv~~p~y~~-~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~ 226 (429)
...++||.| +...-..+...|.+.|..|++..-.-.. .....+..+.++..+..+- -|.+.+++.++
T Consensus 7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~ 76 (269)
T 2h7i_A 7 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDV-----QNEEHLASLAG 76 (269)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCT-----TCHHHHHHHHH
T ss_pred CCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccC-----CCHHHHHHHHH
Confidence 345777766 3333344566677788887765432211 1233333444444444432 25666665554
No 469
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=26.80 E-value=88 Score=29.46 Aligned_cols=71 Identities=11% Similarity=0.166 Sum_probs=42.5
Q ss_pred HHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCC----cEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEE
Q 014172 193 PEMARIADATPVILPTRISENFLLDPKVLESKLTEKS----RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 267 (429)
Q Consensus 193 ~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~----~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~ 267 (429)
...+...+.++....+..+.+|.+....+-+.. ..+ +..+ . ...+.|-.++++++++|++.|+++ +|-||-
T Consensus 39 id~mA~~KlN~lH~HltDdq~~rle~~~~~~~~-~~~~~~~~g~~-~-~~~~~~g~YT~~di~eiv~YA~~r-gI~VIP 113 (367)
T 1yht_A 39 IDTISLSGGNFLHLHFSDHENYAIESHLLNQRA-ENAVQGKDGIY-I-NPYTGKPFLSYRQLDDIKAYAKAK-GIELIP 113 (367)
T ss_dssp HHHHHHTTCCEEEEECBSSSCBCBCBTTTTBCG-GGSEECTTSCE-E-CTTTCCEEBCHHHHHHHHHHHHHT-TCEEEE
T ss_pred HHHHHHcCCcEEEEEEEcCCCceeeecchhhhh-hhhccccCCCc-C-CCCCCCCCcCHHHHHHHHHHHHHc-CCEEEE
Confidence 345556788887777765556666543221110 000 0011 0 112234579999999999999999 998883
No 470
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=26.69 E-value=2.8e+02 Score=24.47 Aligned_cols=95 Identities=16% Similarity=0.104 Sum_probs=50.6
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEE-cCCCCCC---hHHH---HHHcCCEEEEecCCCCCCCCCCHHHHHhhcccC
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVII-PAPFWVS---YPEM---ARIADATPVILPTRISENFLLDPKVLESKLTEK 228 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv-~~p~y~~---~~~~---~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~ 228 (429)
..|++|.|+-..-..++..|++.|..|.+ ....-.. -... ....|++++..++ -|++.+.+++. +
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~-------~d~~~l~~~~~-~ 76 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASL-------DDHQRLVDALK-Q 76 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCS-------SCHHHHHHHHT-T
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCC-------CCHHHHHHHHh-C
Confidence 35777765333333456666667755554 3332111 1111 1234666554443 27888888876 4
Q ss_pred CcEEEEcCCCC-CccCCCCHHHHHHHHHHHHhCCC
Q 014172 229 SRLLILCSPSN-PTGSVYPKNLLDEIARIVAKHPR 262 (429)
Q Consensus 229 ~~~i~l~~p~N-PtG~~~~~~~l~~I~~~a~~~~~ 262 (429)
...|+.+.... +...+.. -..+++.|++. +
T Consensus 77 ~d~vi~~a~~~~~~~~~~~---~~~l~~aa~~~-g 107 (313)
T 1qyd_A 77 VDVVISALAGGVLSHHILE---QLKLVEAIKEA-G 107 (313)
T ss_dssp CSEEEECCCCSSSSTTTTT---HHHHHHHHHHS-C
T ss_pred CCEEEECCccccchhhHHH---HHHHHHHHHhc-C
Confidence 66666544322 2112222 57788899887 6
No 471
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=26.35 E-value=4.2e+02 Score=25.32 Aligned_cols=66 Identities=12% Similarity=0.057 Sum_probs=37.4
Q ss_pred CCcEEEecChHHHHHHHHHHhcC-CCCEEEEcCCCCC---C------------hHHHHHHcCCEEEEecCCCCCCCCCCH
Q 014172 155 PDQILVSNGAKQSILQAVLAVCS-PGDEVIIPAPFWV---S------------YPEMARIADATPVILPTRISENFLLDP 218 (429)
Q Consensus 155 ~~~i~~t~G~~~al~~~l~~l~~-~gd~Vlv~~p~y~---~------------~~~~~~~~g~~~~~v~~~~~~~~~~d~ 218 (429)
+..++||.|++.--..+...|.. .|..|++..-.-. . ....++..|.++..+..+- -|.
T Consensus 61 gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dv-----td~ 135 (422)
T 3s8m_A 61 PKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDA-----FSD 135 (422)
T ss_dssp CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCT-----TSH
T ss_pred CCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecC-----CCH
Confidence 45667776665544445566677 7877765421111 1 1244566788887777643 256
Q ss_pred HHHHhhc
Q 014172 219 KVLESKL 225 (429)
Q Consensus 219 e~l~~~l 225 (429)
+.+++++
T Consensus 136 ~~v~~~v 142 (422)
T 3s8m_A 136 AARAQVI 142 (422)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655544
No 472
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=26.28 E-value=2.2e+02 Score=21.84 Aligned_cols=99 Identities=9% Similarity=-0.006 Sum_probs=60.3
Q ss_pred cEEEecChHHHHHHHH---HHhcC--CCCEEEEcCCCCCChHHHHHHcCC---EEEEecCCCCCCCCCCHHHHHhhcccC
Q 014172 157 QILVSNGAKQSILQAV---LAVCS--PGDEVIIPAPFWVSYPEMARIADA---TPVILPTRISENFLLDPKVLESKLTEK 228 (429)
Q Consensus 157 ~i~~t~G~~~al~~~l---~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~e~l~~~l~~~ 228 (429)
+++....+...+.+++ ..+.+ .+.-|+.-.|.+..+.......|+ +++.+......+ .+..+|++++..
T Consensus 6 Ell~~~~g~~e~~lLlp~L~~l~~~~~~r~ilwi~pp~~~~~~~L~~~Gl~~~rll~v~~~~~~d---~lwa~EqaLrsg 82 (119)
T 1ofu_X 6 ELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNAA---ALALSCEALRLG 82 (119)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHTTCSSSSEEEEESCCTTSCHHHHHHTTCCTTSEEEECCSSHHH---HHHHHHHHHHHT
T ss_pred EEeecCCCccHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCChHHEEEEECCCcHH---HHHHHHHHHhcC
Confidence 4555444444344333 33343 455666667777888888888886 566666432211 356778888877
Q ss_pred CcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeE
Q 014172 229 SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLL 264 (429)
Q Consensus 229 ~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~ 264 (429)
....++..+. .++..+.+++--.|++- +..
T Consensus 83 ~~~aVl~wl~-----~l~~~~~RRLqlAA~~g-~~~ 112 (119)
T 1ofu_X 83 RSHTVVSWLE-----PLSRAARKQLSRAAQLG-QAQ 112 (119)
T ss_dssp CEEEEEECCS-----SCCHHHHHHHHHHHHHH-TCE
T ss_pred CccEEEECCC-----cCChHHHHHHHHHHHhC-CCe
Confidence 6666665433 25777788887777765 443
No 473
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=26.26 E-value=1.2e+02 Score=26.39 Aligned_cols=98 Identities=13% Similarity=0.095 Sum_probs=48.5
Q ss_pred CCCCcEEEecCh--HHHHHHHHHHhcCCCCEEEEcCCCCCC---hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc
Q 014172 153 YTPDQILVSNGA--KQSILQAVLAVCSPGDEVIIPAPFWVS---YPEMARIADATPVILPTRISENFLLDPKVLESKLTE 227 (429)
Q Consensus 153 ~~~~~i~~t~G~--~~al~~~l~~l~~~gd~Vlv~~p~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~ 227 (429)
.....|+||.|+ ...-..+...|.+.|..|++..-.-.. ........+ ++..+..+- -|.+.+++.++.
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv-----~~~~~v~~~~~~ 85 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG-SELVFPCDV-----ADDAQIDALFAS 85 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT-CCCEEECCT-----TCHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC-CcEEEECCC-----CCHHHHHHHHHH
Confidence 345677888765 444445567777889887765433111 112222233 344444432 256666665542
Q ss_pred ------CCcEEEEcCCCCCc----cC---CCCHHHHHHHHHH
Q 014172 228 ------KSRLLILCSPSNPT----GS---VYPKNLLDEIARI 256 (429)
Q Consensus 228 ------~~~~i~l~~p~NPt----G~---~~~~~~l~~I~~~ 256 (429)
+...++-+....+. |. ..+.+++++..++
T Consensus 86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (271)
T 3ek2_A 86 LKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDI 127 (271)
T ss_dssp HHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhh
Confidence 34444433322221 22 2566777766554
No 474
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=26.02 E-value=3.2e+02 Score=27.46 Aligned_cols=92 Identities=11% Similarity=0.031 Sum_probs=48.0
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCC-CCChHHHHHHcCCEEEEecCCCCCCCCCCH-HHHHhhc----c--c
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF-WVSYPEMARIADATPVILPTRISENFLLDP-KVLESKL----T--E 227 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~-y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~-e~l~~~l----~--~ 227 (429)
..++||.|+...-..+...|.+.|..|++.+-. -......++..|.+++.+.. |+ ++.++.+ . .
T Consensus 323 kvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~--------Dv~~~~~~~~~~~~~~~G 394 (604)
T 2et6_A 323 KVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQH--------DVAKDSEAIIKNVIDKYG 394 (604)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECC--------CHHHHHHHHHHHHHHHHS
T ss_pred CeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEc--------ChHHHHHHHHHHHHHhcC
Confidence 345666655554455566677889888775421 11122233445777766654 34 3333222 1 1
Q ss_pred CCcEEEEcCC-CCCcc--CCCCHHHHHHHHHH
Q 014172 228 KSRLLILCSP-SNPTG--SVYPKNLLDEIARI 256 (429)
Q Consensus 228 ~~~~i~l~~p-~NPtG--~~~~~~~l~~I~~~ 256 (429)
+...+ ++|. -...+ .-++.++|+++.++
T Consensus 395 ~iDiL-VnNAGi~~~~~~~~~~~~~~~~~~~v 425 (604)
T 2et6_A 395 TIDIL-VNNAGILRDRSFAKMSKQEWDSVQQV 425 (604)
T ss_dssp CCCEE-EECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred CCCEE-EECCCCCCCCChhhCCHHHHHHHHHH
Confidence 34444 4444 22222 24577888887765
No 475
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=26.00 E-value=3e+02 Score=23.33 Aligned_cols=91 Identities=18% Similarity=0.095 Sum_probs=45.2
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcc---cCCcEEE
Q 014172 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT---EKSRLLI 233 (429)
Q Consensus 157 ~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~---~~~~~i~ 233 (429)
.+++|.|+...-..+...|.+.|..|++..-.-.. ..+..|...+..++.. -+++.+.+.+. .+...++
T Consensus 4 ~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~D~~~-----~~~~~~~~~~~~~~g~id~lv 75 (239)
T 2ekp_A 4 KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSLGAVPLPTDLEK-----DDPKGLVKRALEALGGLHVLV 75 (239)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHHTCEEEECCTTT-----SCHHHHHHHHHHHHTSCCEEE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhhCcEEEecCCch-----HHHHHHHHHHHHHcCCCCEEE
Confidence 46777666555555667777889877765432111 2333365555555432 14444433221 1455555
Q ss_pred EcCCCCCcc--CCCCHHHHHHHHH
Q 014172 234 LCSPSNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 234 l~~p~NPtG--~~~~~~~l~~I~~ 255 (429)
-+......+ ...+.++++++.+
T Consensus 76 ~~Ag~~~~~~~~~~~~~~~~~~~~ 99 (239)
T 2ekp_A 76 HAAAVNVRKPALELSYEEWRRVLY 99 (239)
T ss_dssp ECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred ECCCCCCCCChhhCCHHHHHHHHH
Confidence 433322222 2346666665544
No 476
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=25.78 E-value=3.6e+02 Score=24.08 Aligned_cols=88 Identities=14% Similarity=0.260 Sum_probs=47.2
Q ss_pred cEEEecCh---HHHHHHHHHHhcCCC-CEEEEcCCCCCChH--HHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCc
Q 014172 157 QILVSNGA---KQSILQAVLAVCSPG-DEVIIPAPFWVSYP--EMARIADATPVILPTRISENFLLDPKVLESKLTEKSR 230 (429)
Q Consensus 157 ~i~~t~G~---~~al~~~l~~l~~~g-d~Vlv~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~ 230 (429)
-|++..|+ .+++.++-.+ -+-| |-|++..|.|.... ...+ -...+.+.. +.-
T Consensus 71 pviaGvg~~~t~~ai~la~~a-~~~Gadavlv~~P~y~~~s~~~l~~-------------------~f~~ia~a~--~lP 128 (289)
T 2yxg_A 71 QVIAGAGSNCTEEAIELSVFA-EDVGADAVLSITPYYNKPTQEGLRK-------------------HFGKVAESI--NLP 128 (289)
T ss_dssp EEEEECCCSSHHHHHHHHHHH-HHHTCSEEEEECCCSSCCCHHHHHH-------------------HHHHHHHHC--SSC
T ss_pred cEEEeCCCCCHHHHHHHHHHH-HhcCCCEEEECCCCCCCCCHHHHHH-------------------HHHHHHHhc--CCC
Confidence 37777664 5666544333 3334 88988888875311 0100 011222221 234
Q ss_pred EEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccC
Q 014172 231 LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 270 (429)
Q Consensus 231 ~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Dea 270 (429)
+++.+.|.. ||..++.+.+.+| ++++|++.=|=|..
T Consensus 129 iilYn~P~~-tg~~l~~~~~~~L---a~~~pnivgiK~s~ 164 (289)
T 2yxg_A 129 IVLYNVPSR-TAVNLEPKTVKLL---AEEYSNISAVKEAN 164 (289)
T ss_dssp EEEEECHHH-HSCCCCHHHHHHH---HHHCTTEEEEEECC
T ss_pred EEEEeCccc-cCcCCCHHHHHHH---HHhCCCEEEEEeCC
Confidence 556666664 8888885554444 44456777676654
No 477
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=25.68 E-value=1.4e+02 Score=25.87 Aligned_cols=95 Identities=16% Similarity=0.044 Sum_probs=47.9
Q ss_pred cEEEecChHHHHHHHHHHhcCC--CCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc------C
Q 014172 157 QILVSNGAKQSILQAVLAVCSP--GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------K 228 (429)
Q Consensus 157 ~i~~t~G~~~al~~~l~~l~~~--gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~------~ 228 (429)
.+++|.|+...-..+...|.+. |-.|++..-.-.......+..|.++..+..+- -|.+.+++.++. +
T Consensus 4 ~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~ 78 (254)
T 3kzv_A 4 VILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDI-----TEDSVLKQLVNAAVKGHGK 78 (254)
T ss_dssp EEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCT-----TSHHHHHHHHHHHHHHHSC
T ss_pred EEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCC-----CCHHHHHHHHHHHHHhcCC
Confidence 3556655544334445556554 45666544332233344444566666666543 256666665542 4
Q ss_pred CcEEEEcCCC-CCccC--CCCHHHHHHHHHH
Q 014172 229 SRLLILCSPS-NPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 229 ~~~i~l~~p~-NPtG~--~~~~~~l~~I~~~ 256 (429)
...++-+... .+.+. ..+.+++++..++
T Consensus 79 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~ 109 (254)
T 3kzv_A 79 IDSLVANAGVLEPVQNVNEIDVNAWKKLYDI 109 (254)
T ss_dssp CCEEEEECCCCCCCTTTTSCCHHHHHHHHHH
T ss_pred ccEEEECCcccCCCCCcccCCHHHHHHHHHH
Confidence 5555543332 23222 3466777666543
No 478
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=25.62 E-value=1.1e+02 Score=30.17 Aligned_cols=56 Identities=14% Similarity=0.175 Sum_probs=32.4
Q ss_pred hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCC--HHHHHHHHHHHHhCCCeEEEEcc
Q 014172 192 YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYP--KNLLDEIARIVAKHPRLLVLSDE 269 (429)
Q Consensus 192 ~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~--~~~l~~I~~~a~~~~~i~vi~De 269 (429)
....++..|++.+++|+....- +. ..+.|.+-+ .+.++++++.|+++ |+.||+|-
T Consensus 50 di~~i~~~G~N~vRipi~w~~~-----------~~-----------~~~~~~~~~~~l~~~d~vv~~a~~~-Gi~vildl 106 (515)
T 3icg_A 50 MINKIKEAGFNTLRLPVTWDGH-----------MG-----------AAPEYTIDQTWMKRVEEIANYAFDN-DMYVIINL 106 (515)
T ss_dssp HHHHHHHHTCCEEEECCCCTTS-----------BC-----------CTTTCCBCHHHHHHHHHHHHHHHTT-TCEEEEEC
T ss_pred HHHHHHHCCCCEEEEccchHHh-----------CC-----------CCCCCccCHHHHHHHHHHHHHHHHC-CCEEEEec
Confidence 3456778899999999753210 00 001111111 24577777777777 77777775
Q ss_pred C
Q 014172 270 I 270 (429)
Q Consensus 270 a 270 (429)
-
T Consensus 107 H 107 (515)
T 3icg_A 107 H 107 (515)
T ss_dssp C
T ss_pred C
Confidence 4
No 479
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=25.60 E-value=3.7e+02 Score=24.14 Aligned_cols=34 Identities=18% Similarity=0.376 Sum_probs=21.2
Q ss_pred cEEEecC---hHHHHHHHHHHhcCCC-CEEEEcCCCCCC
Q 014172 157 QILVSNG---AKQSILQAVLAVCSPG-DEVIIPAPFWVS 191 (429)
Q Consensus 157 ~i~~t~G---~~~al~~~l~~l~~~g-d~Vlv~~p~y~~ 191 (429)
-|++..| ..+++.++ +...+-| |.|++..|.|..
T Consensus 78 pviaGvg~~~t~~ai~la-~~a~~~Gadavlv~~P~y~~ 115 (297)
T 3flu_A 78 PVIAGTGANNTVEAIALS-QAAEKAGADYTLSVVPYYNK 115 (297)
T ss_dssp CEEEECCCSSHHHHHHHH-HHHHHTTCSEEEEECCCSSC
T ss_pred cEEEeCCCcCHHHHHHHH-HHHHHcCCCEEEECCCCCCC
Confidence 4676665 45555543 3333445 889988888763
No 480
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=25.55 E-value=91 Score=29.00 Aligned_cols=53 Identities=11% Similarity=0.056 Sum_probs=34.6
Q ss_pred CcEEEecChHHHHHHHHHHh-cCCCCEEEEcCCCCCChHHHHHHcCCEEEEecC
Q 014172 156 DQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPT 208 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~ 208 (429)
..|+.++++..++..++.+- +.-.-+|++|.-.=..-...++.+|++++.++.
T Consensus 88 ~~Vv~aSsGN~g~alA~~aa~~G~~~~IvmP~~~~~~k~~~~~~~GA~Vv~v~~ 141 (344)
T 3vc3_A 88 TTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELILTDP 141 (344)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECG
T ss_pred CEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECC
Confidence 35777777888887666553 222245666654433445678899999998864
No 481
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=25.48 E-value=78 Score=31.73 Aligned_cols=92 Identities=12% Similarity=0.118 Sum_probs=55.1
Q ss_pred cEEEecChHHHHHHHHHHh---------cCCCCEEEEcCCCCCChH-------HHHHHcCCEEEE-----ecCCCCCCCC
Q 014172 157 QILVSNGAKQSILQAVLAV---------CSPGDEVIIPAPFWVSYP-------EMARIADATPVI-----LPTRISENFL 215 (429)
Q Consensus 157 ~i~~t~G~~~al~~~l~~l---------~~~gd~Vlv~~p~y~~~~-------~~~~~~g~~~~~-----v~~~~~~~~~ 215 (429)
-|++++|+..-...++.-+ +++||+|++.....++.. +.+...|++++. +.+. ..
T Consensus 293 ~vii~tgsqGe~~~~L~r~a~~~~~~~~~~~~d~vi~s~~~ipGne~~~~~~~~~l~~~g~~v~~~~~~~~h~S----gH 368 (555)
T 3zq4_A 293 VTILCTGSQGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVIHGPLNDIHTS----GH 368 (555)
T ss_dssp EEEEECCTTCCTTSHHHHHHSSCCSSCCCCTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECSSSSCCCCC----SS
T ss_pred EEEEeCCCCchHHHHHHHHhcCCCCccccCCCCEEEEECCCCCCcHHHHHHHHHHHHHCCCEEEecCCcceEEe----CC
Confidence 4567777643333333333 357899999988777654 234567888865 2221 22
Q ss_pred CCHHHHHhhccc-CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhC
Q 014172 216 LDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 260 (429)
Q Consensus 216 ~d~e~l~~~l~~-~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~ 260 (429)
.+-++|...++- +++-++..+.- ...+.+.++++++.
T Consensus 369 a~~~eL~~~~~~~~Pk~~ipvHGe--------~~~~~~~~~~a~~~ 406 (555)
T 3zq4_A 369 GGQEEQKLMLRLIKPKFFMPIHGE--------YRMQKMHVKLATDC 406 (555)
T ss_dssp CCHHHHHHHHHHSCEEEEEEESBC--------HHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHhCCCEEEEcCCC--------HHHHHHHHHHHHHc
Confidence 478888877653 56766644432 23366777777765
No 482
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=25.31 E-value=3e+02 Score=24.29 Aligned_cols=146 Identities=14% Similarity=0.177 Sum_probs=76.1
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHcCCC------CCCCCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecC------hHH-
Q 014172 100 LAAGEPDFDTPVLIAEAGINAIREGFT------RYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNG------AKQ- 166 (429)
Q Consensus 100 L~~g~~~~~~p~~v~~a~~~~~~~~~~------~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G------~~~- 166 (429)
++.|--.+....+..+.+..+++.|.. .|+ . .+.+.+.+++ .| +..+++++++= +.+
T Consensus 20 lglGt~~~~~~~~~~~~l~~Al~~G~~~~DTA~~Yg----~---E~~lG~al~~-~~--~~R~~~~i~TK~~~~~~~~~~ 89 (276)
T 3f7j_A 20 FGLGVFKVENGNEATESVKAAIKNGYRSIDTAAIYK----N---EEGVGIGIKE-SG--VAREELFITSKVWNEDQGYET 89 (276)
T ss_dssp BCEECTTCCTTHHHHHHHHHHHHTTCCEEECCGGGS----C---HHHHHHHHHH-HC--SCGGGCEEEEEECGGGCSHHH
T ss_pred eeecCCcCCCHHHHHHHHHHHHHcCCCEEECcCccc----C---HHHHHHHHhh-cC--CCcccEEEEEeeCCCCCCHHH
Confidence 444443333357788888888887643 343 2 3445555543 23 34566766531 222
Q ss_pred ---HHHHHHHHh-cCCCCEEEEcCCCCCChHHHHHH-----cCCEEEEecCCCCCCCCCCHHHHHhhccc-CCcEEEEcC
Q 014172 167 ---SILQAVLAV-CSPGDEVIIPAPFWVSYPEMARI-----ADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCS 236 (429)
Q Consensus 167 ---al~~~l~~l-~~~gd~Vlv~~p~y~~~~~~~~~-----~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~ 236 (429)
++...+..| ++.=|.+++-.|....+.+..+. ...++..+-+. + .+++.+++++.. +.+.++...
T Consensus 90 v~~~~~~SL~rLg~dyiDl~~lH~p~~~~~~~~~~~l~~l~~~Gkir~iGvS---n--~~~~~l~~~~~~~~~~~~~~Q~ 164 (276)
T 3f7j_A 90 TLAAFEKSLERLQLDYLDLYLIHWPGKDKYKDTWRALEKLYKDGKIRAIGVS---N--FQVHHLEELLKDAEIKPMVNQV 164 (276)
T ss_dssp HHHHHHHHHHHHTCSCEEEEEESCCCSSSHHHHHHHHHHHHHTTSEEEEEEE---S--CCHHHHHHHHHHCSSCCSEEEE
T ss_pred HHHHHHHHHHHhCCCeeEEEEEecCCCCcHHHHHHHHHHHHHcCCccEEEec---c--CCHHHHHHHHHhcCCCceeeee
Confidence 233333333 12227788888865544333221 13455555552 2 467888877642 222222211
Q ss_pred CCCCccCCCCHHHHHHHHHHHHhCCCeEEEE
Q 014172 237 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 267 (429)
Q Consensus 237 p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~ 267 (429)
..||.- . -.++.++|+++ |+.++.
T Consensus 165 ~~~~~~---~---~~~l~~~~~~~-gi~v~a 188 (276)
T 3f7j_A 165 EFHPRL---T---QKELRDYCKGQ-GIQLEA 188 (276)
T ss_dssp ECBTTB---C---CHHHHHHHHHH-TCEEEE
T ss_pred eecccc---C---CHHHHHHHHHC-CCEEEE
Confidence 223321 1 15789999999 999883
No 483
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=25.01 E-value=1.9e+02 Score=24.93 Aligned_cols=95 Identities=14% Similarity=0.104 Sum_probs=47.8
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEc-CCCCCChHH---HHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc----
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIP-APFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE---- 227 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~-~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~---- 227 (429)
..++||.|+...-..+...|.+.|..|++. ...-..... .....+.++..+..+- -|.+.+++.++.
T Consensus 8 k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~ 82 (264)
T 3i4f_A 8 RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADV-----TKKEDLHKIVEEAMSH 82 (264)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecC-----CCHHHHHHHHHHHHHH
Confidence 456677666555555677788889887765 322111111 1222345566666542 266666665542
Q ss_pred --CCcEEEEcCC--CCCcc--CCCCHHHHHHHHH
Q 014172 228 --KSRLLILCSP--SNPTG--SVYPKNLLDEIAR 255 (429)
Q Consensus 228 --~~~~i~l~~p--~NPtG--~~~~~~~l~~I~~ 255 (429)
+...++-+.. ..+.+ ...+.+++++..+
T Consensus 83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~ 116 (264)
T 3i4f_A 83 FGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQ 116 (264)
T ss_dssp HSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHH
T ss_pred hCCCCEEEECCcccccCCCccccCCHHHHHHHHH
Confidence 4555543332 11111 2345566655544
No 484
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=24.94 E-value=3.7e+02 Score=24.00 Aligned_cols=26 Identities=8% Similarity=0.066 Sum_probs=19.9
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEEccCC
Q 014172 245 YPKNLLDEIARIVAKHPRLLVLSDEIY 271 (429)
Q Consensus 245 ~~~~~l~~I~~~a~~~~~i~vi~Deay 271 (429)
.+.++.++|.+.|+++ ++.+.+-..+
T Consensus 100 ~~~~~~~~l~~~a~~~-g~~~~~~~~~ 125 (319)
T 1tlt_A 100 ENLRDAERLVELAARK-KLTLMVGFNR 125 (319)
T ss_dssp SSHHHHHHHHHHHHHT-TCCEEEECGG
T ss_pred CCHHHHHHHHHHHHHc-CCeEEEeeec
Confidence 4678899999999998 8877754333
No 485
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=24.76 E-value=1.8e+02 Score=24.33 Aligned_cols=91 Identities=10% Similarity=0.121 Sum_probs=48.0
Q ss_pred cEEEecChHHHHHHHHHHhc-CCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEc
Q 014172 157 QILVSNGAKQSILQAVLAVC-SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC 235 (429)
Q Consensus 157 ~i~~t~G~~~al~~~l~~l~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~ 235 (429)
.|++|.|+...-..+...|+ +.|..|++..-.-..-...+...+..+..+..+. -|.+.+++++. +...|+.+
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~d~~~~~~~~~-~~d~vv~~ 80 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSF-----QNPGXLEQAVT-NAEVVFVG 80 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCT-----TCHHHHHHHHT-TCSEEEES
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCC-----CCHHHHHHHHc-CCCEEEEc
Confidence 47777654444444566777 7887776654221100011111334444454432 27888888875 45666544
Q ss_pred CCCCCccCCCCHHHHHHHHHHHHhC
Q 014172 236 SPSNPTGSVYPKNLLDEIARIVAKH 260 (429)
Q Consensus 236 ~p~NPtG~~~~~~~l~~I~~~a~~~ 260 (429)
.... +.+ .+.+++.+++.
T Consensus 81 ag~~------n~~-~~~~~~~~~~~ 98 (221)
T 3r6d_A 81 AMES------GSD-MASIVKALSRX 98 (221)
T ss_dssp CCCC------HHH-HHHHHHHHHHT
T ss_pred CCCC------Chh-HHHHHHHHHhc
Confidence 3321 222 67777777766
No 486
>2hfn_A Synechocystis photoreceptor (SLR1694); beta sheet ferredoxin-like fold, flavin binding protein, electron transport; HET: FMN; 1.80A {Synechocystis SP} PDB: 2hfo_A* 3mzi_A*
Probab=24.72 E-value=55 Score=26.68 Aligned_cols=102 Identities=12% Similarity=0.127 Sum_probs=53.3
Q ss_pred cEEEEcCCCCCccCCCCHHHHHHHHHHHHhCC------CeEEEEccCCcccccCCCCCC--ccccC--CCCCCceE--EE
Q 014172 230 RLLILCSPSNPTGSVYPKNLLDEIARIVAKHP------RLLVLSDEIYEHIIYAPATHT--SFASL--PGMWERTL--TV 297 (429)
Q Consensus 230 ~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~------~i~vi~Deay~~~~~~~~~~~--~~~~~--~~~~~~~i--~~ 297 (429)
+++|++...-+ ++.+++.+|.+.++++. |+++..+..+....-|+.... .+..+ +....++. ..
T Consensus 8 ~liY~S~a~~~----~~~~~l~~Il~~a~~~N~~~gITG~Ll~~~g~F~Q~LEG~~~~V~~l~~rI~~D~RH~~v~~l~~ 83 (153)
T 2hfn_A 8 RLIYSSQGIPN----LQPQDLKDILESSQRNNPANGITGLLCYSKPAFLQVLEGECEQVNETYHRIVQDERHHSPQIIEC 83 (153)
T ss_dssp EEEEEEEECTT----CCHHHHHHHHHHHHHHHHHHTCEEEEEEETTEEEEEEEEEHHHHHHHHHHHHTCTTEEEEEEEEE
T ss_pred EEEEEEeecCC----CCHHHHHHHHHHHHHhhhhcCcEEEEEEeCCEEEEEeeCCHHHHHHHHHHHhcCCCcCCeEEEEe
Confidence 45666555443 35688999999998852 467776655544322221110 01111 22223332 23
Q ss_pred eccChhcccccceeeEEEcC----HHHHHHHHHHhhcccCCCc
Q 014172 298 NGFSKAFAMTGWRLGYIAGP----KHFVAACNKIQSQFTSGAS 336 (429)
Q Consensus 298 ~S~SK~~~~~G~R~G~v~~~----~~~~~~l~~~~~~~~~~~~ 336 (429)
.....- ..++|.+|++-.. ++....+.++.......|.
T Consensus 84 ~~i~~R-~F~~W~M~~~~~~~~~~~~~~~~~~~~~~~~~f~p~ 125 (153)
T 2hfn_A 84 MPIRRR-NFEVWSMQAITVNDLSTEQVKTLVLKYSGFTTLRPS 125 (153)
T ss_dssp EECSSC-SSTTCSCEEEECSTTSCHHHHHHHHHTSSSSSCCGG
T ss_pred cccCCC-ccCCCcCeeecccccchhHHHHHHHhccccccCCCC
Confidence 333333 3579999999877 5665556555333333333
No 487
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=24.54 E-value=44 Score=34.71 Aligned_cols=28 Identities=14% Similarity=0.255 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHhCCCeEEEEccCCcccc
Q 014172 247 KNLLDEIARIVAKHPRLLVLSDEIYEHII 275 (429)
Q Consensus 247 ~~~l~~I~~~a~~~~~i~vi~Deay~~~~ 275 (429)
.++++++++-|+++ |+-||.|-+|.+..
T Consensus 254 ~~efk~lV~~~H~~-Gi~VilDvV~NH~~ 281 (714)
T 2ya0_A 254 IAEFKNLINEIHKR-GMGAILDVVYNHTA 281 (714)
T ss_dssp HHHHHHHHHHHHHT-TCEEEEEECTTBCS
T ss_pred HHHHHHHHHHHHHC-CCEEEEEeccCccc
Confidence 68999999999999 99999999998753
No 488
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=24.53 E-value=2.7e+02 Score=25.55 Aligned_cols=74 Identities=14% Similarity=-0.038 Sum_probs=45.8
Q ss_pred hHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEccCC
Q 014172 192 YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY 271 (429)
Q Consensus 192 ~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~vi~Deay 271 (429)
.....+.+|.+. +. +++-.-|.-.+.+... ...|=+.-.++|.|-..+.+++.++++.|+++ |+.|+.|--|
T Consensus 11 ~~~~~e~~g~~~--~~---~~G~~~d~~~ilk~~G--~N~VRi~~w~~P~~g~~~~~~~~~~~~~A~~~-GlkV~ld~Hy 82 (332)
T 1hjs_A 11 SVVVEERAGVSY--KN---TNGNAQPLENILAANG--VNTVRQRVWVNPADGNYNLDYNIAIAKRAKAA-GLGVYIDFHY 82 (332)
T ss_dssp THHHHHHTTCCC--BC---TTSCBCCHHHHHHHTT--CCEEEEEECSSCTTCTTSHHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred HHHHHHHcCCEE--EC---CCCCcccHHHHHHHCC--CCEEEEeeeeCCCCCcCCHHHHHHHHHHHHHC-CCEEEEEecc
Confidence 344566677663 22 1222234444433333 22222211477888888999999999999999 9999999655
Q ss_pred cc
Q 014172 272 EH 273 (429)
Q Consensus 272 ~~ 273 (429)
++
T Consensus 83 sd 84 (332)
T 1hjs_A 83 SD 84 (332)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 489
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=24.52 E-value=2.9e+02 Score=24.18 Aligned_cols=75 Identities=15% Similarity=0.160 Sum_probs=39.7
Q ss_pred CcEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHH---HHHcCC-EEEEecCCCCCCCCCCHHHHHhhccc----
Q 014172 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADA-TPVILPTRISENFLLDPKVLESKLTE---- 227 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~---~~~~g~-~~~~v~~~~~~~~~~d~e~l~~~l~~---- 227 (429)
..++||.|+...-..+...|.+.|..|++..-.-...... ++..|. ++..+..+. -|.+.+++.++.
T Consensus 29 k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~d~~~v~~~~~~~~~~ 103 (286)
T 1xu9_A 29 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTM-----EDMTFAEQFVAQAGKL 103 (286)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCC-----CCHHHHHHHHHHHHHH
Confidence 4577776655544556666778888877654322222221 222243 566666542 256666655432
Q ss_pred --CCcEEEEc
Q 014172 228 --KSRLLILC 235 (429)
Q Consensus 228 --~~~~i~l~ 235 (429)
+...++.+
T Consensus 104 ~g~iD~li~n 113 (286)
T 1xu9_A 104 MGGLDMLILN 113 (286)
T ss_dssp HTSCSEEEEC
T ss_pred cCCCCEEEEC
Confidence 45665544
No 490
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=24.27 E-value=2.1e+02 Score=28.26 Aligned_cols=99 Identities=11% Similarity=0.151 Sum_probs=50.5
Q ss_pred CCCCcEEEecChHHHHHH-HHHHhcCCCCE-EEEc--CCCC------------C---ChHHHHHHcCCEEEEecCCCCCC
Q 014172 153 YTPDQILVSNGAKQSILQ-AVLAVCSPGDE-VIIP--APFW------------V---SYPEMARIADATPVILPTRISEN 213 (429)
Q Consensus 153 ~~~~~i~~t~G~~~al~~-~l~~l~~~gd~-Vlv~--~p~y------------~---~~~~~~~~~g~~~~~v~~~~~~~ 213 (429)
+.++.+++.+|++.+|-. +.+.|.+.|.. |++. ...- . .....++..|.++..+.++-.
T Consensus 248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvt-- 325 (525)
T 3qp9_A 248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLT-- 325 (525)
T ss_dssp SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTT--
T ss_pred ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCC--
Confidence 344455555555555543 44556667754 4443 2211 1 122334456888888877532
Q ss_pred CCCCHHHHHhhccc-----CCcEEEEcCCCCCccC--CCCHHHHHHHHHH
Q 014172 214 FLLDPKVLESKLTE-----KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 214 ~~~d~e~l~~~l~~-----~~~~i~l~~p~NPtG~--~~~~~~l~~I~~~ 256 (429)
|.+.+++.+.. +...|+-+......|. .++.++++++.+.
T Consensus 326 ---d~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~ 372 (525)
T 3qp9_A 326 ---DAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTA 372 (525)
T ss_dssp ---SHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHH
Confidence 67777766643 2344443333222232 3466667766554
No 491
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=24.13 E-value=1e+02 Score=24.35 Aligned_cols=85 Identities=18% Similarity=0.185 Sum_probs=45.0
Q ss_pred HHHHhcCCCCEEEEcCCCC---------CChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhcccCCcEEEEcCCCCCc
Q 014172 171 AVLAVCSPGDEVIIPAPFW---------VSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPT 241 (429)
Q Consensus 171 ~l~~l~~~gd~Vlv~~p~y---------~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~~~~~i~l~~p~NPt 241 (429)
+++.+.+.|-+|...+|.. .+..+... ..+++.+-+.++ .-.+.+++.+..+.+.+++..
T Consensus 33 ~~~~L~~~G~~V~~vnp~~~~i~G~~~~~s~~el~~--~vDlvii~vp~~----~v~~v~~~~~~~g~~~i~~~~----- 101 (138)
T 1y81_A 33 ILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPK--DVDVIVFVVPPK----VGLQVAKEAVEAGFKKLWFQP----- 101 (138)
T ss_dssp HHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCT--TCCEEEECSCHH----HHHHHHHHHHHTTCCEEEECT-----
T ss_pred HHHHHHHCCCEEEEeCCCCCeECCeeecCCHHHhCC--CCCEEEEEeCHH----HHHHHHHHHHHcCCCEEEEcC-----
Confidence 3444555666677667653 22222222 233444333211 123344444455677776533
Q ss_pred cCCCCHHHHHHHHHHHHhCCCeEEEEccCCc
Q 014172 242 GSVYPKNLLDEIARIVAKHPRLLVLSDEIYE 272 (429)
Q Consensus 242 G~~~~~~~l~~I~~~a~~~~~i~vi~Deay~ 272 (429)
|.. -+++.+.|+++ ++.+|-+.+..
T Consensus 102 ~~~-----~~~l~~~a~~~-Gi~~igpnc~g 126 (138)
T 1y81_A 102 GAE-----SEEIRRFLEKA-GVEYSFGRCIM 126 (138)
T ss_dssp TSC-----CHHHHHHHHHH-TCEEECSCCHH
T ss_pred ccH-----HHHHHHHHHHC-CCEEEcCCcce
Confidence 221 36788899999 99988655543
No 492
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=24.08 E-value=1.9e+02 Score=23.71 Aligned_cols=90 Identities=18% Similarity=0.166 Sum_probs=42.6
Q ss_pred EEEecChHHHHHHHHHHhcCCCCEEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc--CCcEEEEc
Q 014172 158 ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE--KSRLLILC 235 (429)
Q Consensus 158 i~~t~G~~~al~~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--~~~~i~l~ 235 (429)
+++|.|+...-..+...|.+. .|++..-.-..........+. ..+..+. -|.+.+++.++. +...++.+
T Consensus 3 vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~--~~~~~D~-----~~~~~~~~~~~~~~~id~vi~~ 73 (207)
T 2yut_A 3 VLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA--RALPADL-----ADELEAKALLEEAGPLDLLVHA 73 (207)
T ss_dssp EEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC--EECCCCT-----TSHHHHHHHHHHHCSEEEEEEC
T ss_pred EEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC--cEEEeeC-----CCHHHHHHHHHhcCCCCEEEEC
Confidence 566665544444556666666 555544322222233333333 3343322 267888777763 55565544
Q ss_pred CCCCCccC--CCCHHHHHHHHHH
Q 014172 236 SPSNPTGS--VYPKNLLDEIARI 256 (429)
Q Consensus 236 ~p~NPtG~--~~~~~~l~~I~~~ 256 (429)
....+.+. ..+.+++++..+.
T Consensus 74 ag~~~~~~~~~~~~~~~~~~~~~ 96 (207)
T 2yut_A 74 VGKAGRASVREAGRDLVEEMLAA 96 (207)
T ss_dssp CCCCCCBCSCC---CHHHHHHHH
T ss_pred CCcCCCCChhhCCHHHHHHHHHH
Confidence 33332222 2344555555543
No 493
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=23.98 E-value=1.5e+02 Score=26.89 Aligned_cols=18 Identities=22% Similarity=0.372 Sum_probs=13.8
Q ss_pred hHHHHHHcCCEEEEecCC
Q 014172 192 YPEMARIADATPVILPTR 209 (429)
Q Consensus 192 ~~~~~~~~g~~~~~v~~~ 209 (429)
....++..|++.+.+|+.
T Consensus 46 d~~~l~~~G~n~vRi~i~ 63 (320)
T 3nco_A 46 YFKIIKERGFDSVRIPIR 63 (320)
T ss_dssp HHHHHHHHTCCEEEECCC
T ss_pred HHHHHHHCCCCEEEEeee
Confidence 445677889999999863
No 494
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=23.77 E-value=2e+02 Score=26.06 Aligned_cols=63 Identities=14% Similarity=0.053 Sum_probs=0.0
Q ss_pred HHHcCCEEEEecCCCCCCCCCCHHHHHhhcc----cCCcEEEEcCCCCCccCCCCHHHHHHHHHHHHh
Q 014172 196 ARIADATPVILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK 259 (429)
Q Consensus 196 ~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~----~~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~ 259 (429)
.+....-+..+.+.-..+..+|.+.+++.++ .....|+++.-+- -+..++.+|.+++++.+.+
T Consensus 13 ~~~~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttG-E~~~Lt~~Er~~v~~~~~~ 79 (304)
T 3l21_A 13 AARLGTLLTAMVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTG-ESPTTTDGEKIELLRAVLE 79 (304)
T ss_dssp HHHHCSEEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTT-TGGGSCHHHHHHHHHHHHH
T ss_pred cccCCceEEEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCcccc-chhhCCHHHHHHHHHHHHH
No 495
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=23.74 E-value=46 Score=32.23 Aligned_cols=30 Identities=7% Similarity=0.149 Sum_probs=26.6
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCccccc
Q 014172 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIY 276 (429)
Q Consensus 246 ~~~~l~~I~~~a~~~~~i~vi~Deay~~~~~ 276 (429)
+.++++++++-|+++ |+.||.|-++.+...
T Consensus 63 t~~dfk~Lv~~aH~~-Gi~VilD~V~NH~~~ 92 (448)
T 1g94_A 63 NRAQFIDMVNRCSAA-GVDIYVDTLINHMAA 92 (448)
T ss_dssp CHHHHHHHHHHHHHT-TCEEEEEEECSEECS
T ss_pred CHHHHHHHHHHHHHC-CCEEEEEEeeccccC
Confidence 478899999999999 999999999887543
No 496
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=23.72 E-value=2.7e+02 Score=25.58 Aligned_cols=71 Identities=8% Similarity=0.010 Sum_probs=43.6
Q ss_pred cCCCCEEEEcCCCCCCh---H-------HHHHHcCCEEEEecCCCCC-CC--CCC---HHHHHhhcc-cCCcEEEEcCCC
Q 014172 176 CSPGDEVIIPAPFWVSY---P-------EMARIADATPVILPTRISE-NF--LLD---PKVLESKLT-EKSRLLILCSPS 238 (429)
Q Consensus 176 ~~~gd~Vlv~~p~y~~~---~-------~~~~~~g~~~~~v~~~~~~-~~--~~d---~e~l~~~l~-~~~~~i~l~~p~ 238 (429)
+++||+|-+..|+.... . ..++..|.+++.-+.-... ++ .-| .++|.+++. +..++|+-.-..
T Consensus 9 L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG 88 (331)
T 4e5s_A 9 LKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLGG 88 (331)
T ss_dssp CCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 67899999999987643 2 2355689999887643221 11 112 455555554 467888765555
Q ss_pred CCccCCCC
Q 014172 239 NPTGSVYP 246 (429)
Q Consensus 239 NPtG~~~~ 246 (429)
.-+-.+++
T Consensus 89 ~g~~rlL~ 96 (331)
T 4e5s_A 89 YNSNGLLK 96 (331)
T ss_dssp SCGGGGGG
T ss_pred ccHHHHHh
Confidence 44445544
No 497
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=23.69 E-value=2.4e+02 Score=24.77 Aligned_cols=98 Identities=13% Similarity=0.122 Sum_probs=46.5
Q ss_pred CCCcEEEecCh--HHHHHHHHHHhcCCCCEEEEcCCCCC-ChHHHHHHcCCEEEEecCCCCCCCCCCHHHHHhhccc---
Q 014172 154 TPDQILVSNGA--KQSILQAVLAVCSPGDEVIIPAPFWV-SYPEMARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (429)
Q Consensus 154 ~~~~i~~t~G~--~~al~~~l~~l~~~gd~Vlv~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~~~~d~e~l~~~l~~--- 227 (429)
....++||.|+ ...-..+...|.+.|..|++..-.-. .....+...+.++..+..+- -|.+.+++.++.
T Consensus 25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~ 99 (280)
T 3nrc_A 25 AGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDV-----ISDQEIKDLFVELGK 99 (280)
T ss_dssp TTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeec-----CCHHHHHHHHHHHHH
Confidence 34567777654 33334456677788887766543321 11122222222344444432 256666655532
Q ss_pred ---CCcEEEEcCCCCCc----cCC---CCHHHHHHHHHH
Q 014172 228 ---KSRLLILCSPSNPT----GSV---YPKNLLDEIARI 256 (429)
Q Consensus 228 ---~~~~i~l~~p~NPt----G~~---~~~~~l~~I~~~ 256 (429)
+...++-+....+. +.. .+.+++++..++
T Consensus 100 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (280)
T 3nrc_A 100 VWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDI 138 (280)
T ss_dssp HCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHH
Confidence 45555543332222 111 566666665543
No 498
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=23.57 E-value=3e+02 Score=24.97 Aligned_cols=150 Identities=13% Similarity=0.145 Sum_probs=76.8
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHHHhhcCCCCCCCcEEEecC------hHH----H
Q 014172 100 LAAGEPDFDTPVLIAEAGINAIREGFTRYT--PNAGTLELRSAICHKLKEENGLSYTPDQILVSNG------AKQ----S 167 (429)
Q Consensus 100 L~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~--~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G------~~~----a 167 (429)
++.|.-.+....+..+.+..+++.+...+. +..|. .+.+.+.+++ .| +..+++++++= +.+ +
T Consensus 54 lglGt~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~---E~~lG~al~~-~~--~~R~~v~I~TK~~~~~~~~~~i~~~ 127 (310)
T 3b3e_A 54 FGLGVFKVENGNEATESVKAAIKNGYRSIDTAAIYKN---EEGVGIGIKE-SG--VAREELFITSKVWNEDQGYETTLAA 127 (310)
T ss_dssp BCEECTTCCTTHHHHHHHHHHHHTTCCEEECCGGGSC---HHHHHHHHHH-SS--SCGGGCEEEEEECGGGCSHHHHHHH
T ss_pred eeeeCCcCCCHHHHHHHHHHHHHcCCCEEECCCccCC---HHHHHHHHHh-cC--CCcceEEEEEeCCCCCCCHHHHHHH
Confidence 444443333357788888888887643111 11122 4445555543 23 34566766531 222 2
Q ss_pred HHHHHHHh-cCCCCEEEEcCCCCCChHHHHHH-----cCCEEEEecCCCCCCCCCCHHHHHhhccc-CCcEEEEcCCCCC
Q 014172 168 ILQAVLAV-CSPGDEVIIPAPFWVSYPEMARI-----ADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNP 240 (429)
Q Consensus 168 l~~~l~~l-~~~gd~Vlv~~p~y~~~~~~~~~-----~g~~~~~v~~~~~~~~~~d~e~l~~~l~~-~~~~i~l~~p~NP 240 (429)
+...+..| ++.=|.+++-.|....+.+..+. ...++..+-+. + .+++.+++++.. +.+.++.....||
T Consensus 128 ~e~SL~rLg~dyiDl~~lH~p~~~~~~e~~~al~~l~~~Gkir~iGvS---n--~~~~~l~~~~~~~~~~p~~~Q~~~~~ 202 (310)
T 3b3e_A 128 FEKSLERLQLDYLDLYLIHWPGKDKYKDTWRALEKLYKDGKIRAIGVS---N--FQVHHLEELLKDAEIKPMVNQVEFHP 202 (310)
T ss_dssp HHHHHHHHTCSCEEEEEESCCCSSCHHHHHHHHHHHHHTTSEEEEEEE---S--CCHHHHHHHHHHCSSCCSEEEEECBT
T ss_pred HHHHHHHhCCCeeEEEEeeCCCcccHHHHHHHHHHHHHcCCcceEeec---C--CCHHHHHHHHHhcCCCcceeeeeccC
Confidence 33333333 12227788888865544333221 13455555552 2 477888877642 2222222212233
Q ss_pred ccCCCCHHHHHHHHHHHHhCCCeEEEE
Q 014172 241 TGSVYPKNLLDEIARIVAKHPRLLVLS 267 (429)
Q Consensus 241 tG~~~~~~~l~~I~~~a~~~~~i~vi~ 267 (429)
.- . -.++.++|+++ |+-++.
T Consensus 203 ~~---~---~~~l~~~~~~~-gi~v~a 222 (310)
T 3b3e_A 203 RL---T---QKELRDYCKGQ-GIQLEA 222 (310)
T ss_dssp TB---C---CHHHHHHHHHH-TCEEEE
T ss_pred cc---C---CHHHHHHHHHc-CCEEEE
Confidence 21 1 15789999999 999883
No 499
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=23.50 E-value=56 Score=31.51 Aligned_cols=29 Identities=14% Similarity=0.103 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCcccc
Q 014172 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHII 275 (429)
Q Consensus 246 ~~~~l~~I~~~a~~~~~i~vi~Deay~~~~ 275 (429)
+.++++++++-|+++ |+.||.|-++.+..
T Consensus 68 t~~df~~lv~~aH~~-Gi~VilD~V~NH~~ 96 (441)
T 1lwj_A 68 SEREFKEMIEAFHDS-GIKVVLDLPIHHTG 96 (441)
T ss_dssp CHHHHHHHHHHHHHT-TCEEEEEECTTBCC
T ss_pred CHHHHHHHHHHHHHC-CCEEEEEeCCCccc
Confidence 478999999999999 99999999987653
No 500
>1oft_A SULA, hypothetical protein PA3008; bacterial cell division inhibitor, FTSZ, SULA protein; 2.9A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=23.42 E-value=3e+02 Score=22.43 Aligned_cols=100 Identities=9% Similarity=-0.004 Sum_probs=61.5
Q ss_pred CcEEEecChHHHHHHHHH---HhcC--CCCEEEEcCCCCCChHHHHHHcCC---EEEEecCCCCCCCCCCHHHHHhhccc
Q 014172 156 DQILVSNGAKQSILQAVL---AVCS--PGDEVIIPAPFWVSYPEMARIADA---TPVILPTRISENFLLDPKVLESKLTE 227 (429)
Q Consensus 156 ~~i~~t~G~~~al~~~l~---~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~e~l~~~l~~ 227 (429)
.+|+....+...+..++- .+.. .+..|+.-.|-+..|.......|+ +++.|....+.+ .+..+|++++.
T Consensus 47 ~Ell~~~~g~gel~LL~P~La~l~~~~~~r~vlwI~Pp~~l~~~~L~~~Gl~~~rll~v~~~~~~d---aLwa~EqALrs 123 (161)
T 1oft_A 47 SELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNAA---ALALSCEALRL 123 (161)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHHHTCSSSSEEEEESCCTTSCHHHHHHTTCCGGGEEEECCSSTTH---HHHHHHHHHHT
T ss_pred EEEccCCCcHHHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCCHHHEEEEECCChHH---HHHHHHHHHhc
Confidence 366665444333333322 2332 445566667777888989998887 466666533221 46778888888
Q ss_pred CCcEEEEcCCCCCccCCCCHHHHHHHHHHHHhCCCeE
Q 014172 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLL 264 (429)
Q Consensus 228 ~~~~i~l~~p~NPtG~~~~~~~l~~I~~~a~~~~~i~ 264 (429)
.....++.-.. .++.++++++--.|++- +.+
T Consensus 124 G~~~aVl~Wl~-----~l~~~~~RRLqlAAe~g-~~~ 154 (161)
T 1oft_A 124 GRSHTVVSWLE-----PLSRAARKQLSRAAQLG-QAQ 154 (161)
T ss_dssp TCEEEEEECCS-----SCCHHHHHHHHHHHHHT-TCE
T ss_pred CCccEEEECCC-----cCChHHHHHHHHHHHhC-CCe
Confidence 77666665433 25777788887777765 544
Done!