BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014174
(429 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 504 bits (1297), Expect = e-143, Method: Compositional matrix adjust.
Identities = 241/360 (66%), Positives = 291/360 (80%), Gaps = 5/360 (1%)
Query: 66 DGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVL 125
D +G++ ++ T G+ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVL
Sbjct: 25 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 82
Query: 126 QDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEFVPETVYRVAKHYSR 184
QDKR+KNRELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL++VPETVYRVA+HYSR
Sbjct: 83 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 142
Query: 185 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL 244
A Q +P+IYVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK L
Sbjct: 143 AKQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 201
Query: 245 VKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV 304
V+GEPN+SYICSRYYRAPELIFGAT+YT++ID+WS GCVLAELLLGQP+FPG+SGVDQLV
Sbjct: 202 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 261
Query: 305 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNL 364
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P
Sbjct: 262 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 321
Query: 365 RCTALEACIHPFFYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQC 424
R T LEAC H FF ELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR Q
Sbjct: 322 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHARIQA 380
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 503 bits (1296), Expect = e-143, Method: Compositional matrix adjust.
Identities = 241/360 (66%), Positives = 291/360 (80%), Gaps = 5/360 (1%)
Query: 66 DGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVL 125
D +G++ ++ T G+ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVL
Sbjct: 31 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 88
Query: 126 QDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEFVPETVYRVAKHYSR 184
QDKR+KNRELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL++VPETVYRVA+HYSR
Sbjct: 89 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 148
Query: 185 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL 244
A Q +P+IYVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK L
Sbjct: 149 AKQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
Query: 245 VKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV 304
V+GEPN+SYICSRYYRAPELIFGAT+YT++ID+WS GCVLAELLLGQP+FPG+SGVDQLV
Sbjct: 208 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 267
Query: 305 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNL 364
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P
Sbjct: 268 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 327
Query: 365 RCTALEACIHPFFYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQC 424
R T LEAC H FF ELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR Q
Sbjct: 328 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHARIQA 386
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 503 bits (1296), Expect = e-143, Method: Compositional matrix adjust.
Identities = 241/360 (66%), Positives = 291/360 (80%), Gaps = 5/360 (1%)
Query: 66 DGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVL 125
D +G++ ++ T G+ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVL
Sbjct: 35 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 92
Query: 126 QDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEFVPETVYRVAKHYSR 184
QDKR+KNRELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL++VPETVYRVA+HYSR
Sbjct: 93 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 152
Query: 185 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL 244
A Q +P+IYVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK L
Sbjct: 153 AKQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 211
Query: 245 VKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV 304
V+GEPN+SYICSRYYRAPELIFGAT+YT++ID+WS GCVLAELLLGQP+FPG+SGVDQLV
Sbjct: 212 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 271
Query: 305 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNL 364
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P
Sbjct: 272 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 331
Query: 365 RCTALEACIHPFFYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQC 424
R T LEAC H FF ELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR Q
Sbjct: 332 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHARIQA 390
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 503 bits (1295), Expect = e-143, Method: Compositional matrix adjust.
Identities = 241/360 (66%), Positives = 291/360 (80%), Gaps = 5/360 (1%)
Query: 66 DGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVL 125
D +G++ ++ T G+ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVL
Sbjct: 76 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 133
Query: 126 QDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEFVPETVYRVAKHYSR 184
QDKR+KNRELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL++VPETVYRVA+HYSR
Sbjct: 134 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 193
Query: 185 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL 244
A Q +P+IYVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK L
Sbjct: 194 AKQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 252
Query: 245 VKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV 304
V+GEPN+SYICSRYYRAPELIFGAT+YT++ID+WS GCVLAELLLGQP+FPG+SGVDQLV
Sbjct: 253 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 312
Query: 305 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNL 364
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P
Sbjct: 313 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 372
Query: 365 RCTALEACIHPFFYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQC 424
R T LEAC H FF ELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR Q
Sbjct: 373 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHARIQA 431
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 503 bits (1295), Expect = e-143, Method: Compositional matrix adjust.
Identities = 241/360 (66%), Positives = 291/360 (80%), Gaps = 5/360 (1%)
Query: 66 DGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVL 125
D +G++ ++ T G+ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVL
Sbjct: 33 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 90
Query: 126 QDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEFVPETVYRVAKHYSR 184
QDKR+KNRELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL++VPETVYRVA+HYSR
Sbjct: 91 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 150
Query: 185 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL 244
A Q +P+IYVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK L
Sbjct: 151 AKQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 209
Query: 245 VKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV 304
V+GEPN+SYICSRYYRAPELIFGAT+YT++ID+WS GCVLAELLLGQP+FPG+SGVDQLV
Sbjct: 210 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 269
Query: 305 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNL 364
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P
Sbjct: 270 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 329
Query: 365 RCTALEACIHPFFYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQC 424
R T LEAC H FF ELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR Q
Sbjct: 330 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHARIQA 388
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 502 bits (1292), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/360 (66%), Positives = 291/360 (80%), Gaps = 5/360 (1%)
Query: 66 DGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVL 125
D +G++ ++ T G+ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVL
Sbjct: 10 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 67
Query: 126 QDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEFVPETVYRVAKHYSR 184
QDKR+KNRELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL++VPETVYRVA+HYSR
Sbjct: 68 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 127
Query: 185 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL 244
A Q +P+IYVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK L
Sbjct: 128 AKQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 186
Query: 245 VKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV 304
V+GEPN+SYICSRYYRAPELIFGAT+YT++ID+WS GCVLAELLLGQP+FPG+SGVDQLV
Sbjct: 187 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 246
Query: 305 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNL 364
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P
Sbjct: 247 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 306
Query: 365 RCTALEACIHPFFYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQC 424
R T LEAC H FF ELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR Q
Sbjct: 307 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHARIQA 365
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 501 bits (1291), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/352 (68%), Positives = 287/352 (81%), Gaps = 6/352 (1%)
Query: 77 VTTIGGRNGQPK---QTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR 133
VTT+ GQ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQDKR+KNR
Sbjct: 8 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR 67
Query: 134 ELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEFVPETVYRVAKHYSRASQRMPLI 192
ELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL++VPETVYRVA+HYSRA Q +P+I
Sbjct: 68 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 127
Query: 193 YVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 252
YVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 128 YVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 186
Query: 253 YICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 312
YICSRYYRAPELIFGAT+YT++ID+WS GCVLAELLLGQP+FPG+SGVDQLVEIIKVLGT
Sbjct: 187 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 246
Query: 313 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
PTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T LEAC
Sbjct: 247 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 306
Query: 373 IHPFFYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQC 424
H FF ELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR Q
Sbjct: 307 AHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHARIQA 357
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 501 bits (1289), Expect = e-142, Method: Compositional matrix adjust.
Identities = 240/360 (66%), Positives = 290/360 (80%), Gaps = 5/360 (1%)
Query: 66 DGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVL 125
D +G++ ++ T G+ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVL
Sbjct: 31 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 88
Query: 126 QDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEFVPETVYRVAKHYSR 184
QDKR+KNRELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL++VPETVYRVA+HYSR
Sbjct: 89 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 148
Query: 185 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL 244
A Q +P+IYVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK L
Sbjct: 149 AKQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
Query: 245 VKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV 304
V+GEPN+S ICSRYYRAPELIFGAT+YT++ID+WS GCVLAELLLGQP+FPG+SGVDQLV
Sbjct: 208 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 267
Query: 305 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNL 364
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P
Sbjct: 268 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 327
Query: 365 RCTALEACIHPFFYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQC 424
R T LEAC H FF ELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR Q
Sbjct: 328 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHARIQA 386
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 499 bits (1286), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/375 (64%), Positives = 296/375 (78%), Gaps = 12/375 (3%)
Query: 51 IKGERVEKEMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQA 110
++G +V + D +G++ ++ T G+ Q +SY +V+G GSFG+V+QA
Sbjct: 1 MRGSKVSR-------DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQA 51
Query: 111 KCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLE 169
K ++GE VAIKKVLQDKR+KNRELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL+
Sbjct: 52 KLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 111
Query: 170 FVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPH 229
+VPETVYRVA+HYSRA Q +P+IYVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P
Sbjct: 112 YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPD 170
Query: 230 THQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLL 289
T +KLCDFGSAK LV+GEPN+S ICSRYYRAPELIFGAT+YT++ID+WS GCVLAELLL
Sbjct: 171 TAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 230
Query: 290 GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPE 349
GQP+FPG+SGVDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPE
Sbjct: 231 GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPE 290
Query: 350 AVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNARLPNGRPFPPLFNFKPQELKGASK 409
A+ L SRLL+Y+P R T LEAC H FF ELRDPN +LPNGR P LFNF QEL ++
Sbjct: 291 AIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNP 349
Query: 410 ELLSKLIPEHARKQC 424
L + LIP HAR Q
Sbjct: 350 PLATILIPPHARIQA 364
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 499 bits (1284), Expect = e-141, Method: Compositional matrix adjust.
Identities = 240/360 (66%), Positives = 290/360 (80%), Gaps = 5/360 (1%)
Query: 66 DGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVL 125
D +G++ ++ T G+ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVL
Sbjct: 16 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 73
Query: 126 QDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEFVPETVYRVAKHYSR 184
QDKR+KNRELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL++VPETVYRVA+HYSR
Sbjct: 74 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 133
Query: 185 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL 244
A Q +P+IYVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK L
Sbjct: 134 AKQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 192
Query: 245 VKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV 304
V+GEPN+S ICSRYYRAPELIFGAT+YT++ID+WS GCVLAELLLGQP+FPG+SGVDQLV
Sbjct: 193 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 252
Query: 305 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNL 364
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P
Sbjct: 253 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 312
Query: 365 RCTALEACIHPFFYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQC 424
R T LEAC H FF ELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR Q
Sbjct: 313 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHARIQA 371
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 499 bits (1284), Expect = e-141, Method: Compositional matrix adjust.
Identities = 240/360 (66%), Positives = 290/360 (80%), Gaps = 5/360 (1%)
Query: 66 DGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVL 125
D +G++ ++ T G+ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVL
Sbjct: 9 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 66
Query: 126 QDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEFVPETVYRVAKHYSR 184
QDKR+KNRELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL++VPETVYRVA+HYSR
Sbjct: 67 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 126
Query: 185 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL 244
A Q +P+IYVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK L
Sbjct: 127 AKQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
Query: 245 VKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV 304
V+GEPN+S ICSRYYRAPELIFGAT+YT++ID+WS GCVLAELLLGQP+FPG+SGVDQLV
Sbjct: 186 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 245
Query: 305 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNL 364
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P
Sbjct: 246 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 305
Query: 365 RCTALEACIHPFFYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQC 424
R T LEAC H FF ELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR Q
Sbjct: 306 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHARIQA 364
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 499 bits (1284), Expect = e-141, Method: Compositional matrix adjust.
Identities = 240/360 (66%), Positives = 290/360 (80%), Gaps = 5/360 (1%)
Query: 66 DGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVL 125
D +G++ ++ T G+ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVL
Sbjct: 5 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 62
Query: 126 QDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEFVPETVYRVAKHYSR 184
QDKR+KNRELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL++VPETVYRVA+HYSR
Sbjct: 63 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 122
Query: 185 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL 244
A Q +P+IYVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK L
Sbjct: 123 AKQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 181
Query: 245 VKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV 304
V+GEPN+S ICSRYYRAPELIFGAT+YT++ID+WS GCVLAELLLGQP+FPG+SGVDQLV
Sbjct: 182 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 241
Query: 305 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNL 364
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P
Sbjct: 242 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 301
Query: 365 RCTALEACIHPFFYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQC 424
R T LEAC H FF ELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR Q
Sbjct: 302 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHARIQA 360
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 497 bits (1280), Expect = e-141, Method: Compositional matrix adjust.
Identities = 241/349 (69%), Positives = 286/349 (81%), Gaps = 6/349 (1%)
Query: 77 VTTIGGRNGQPK---QTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR 133
VTT+ GQ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQDKR+KNR
Sbjct: 3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR 62
Query: 134 ELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEFVPETVYRVAKHYSRASQRMPLI 192
ELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL++VPETVYRVA+HYSRA Q +P+I
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 193 YVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 252
YVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 123 YVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 253 YICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 312
YICSRYYRAPELIFGAT+YT++ID+WS GCVLAELLLGQP+FPG+SGVDQLVEIIKVLGT
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 313 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
PTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T LEAC
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 373 IHPFFYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHAR 421
H FF ELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR
Sbjct: 302 AHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHAR 349
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 496 bits (1276), Expect = e-140, Method: Compositional matrix adjust.
Identities = 241/351 (68%), Positives = 286/351 (81%), Gaps = 6/351 (1%)
Query: 77 VTTIGGRNGQPK---QTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR 133
VTT+ GQ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQDKR+KNR
Sbjct: 3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR 62
Query: 134 ELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEFVPETVYRVAKHYSRASQRMPLI 192
ELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL++VPETVYRVA+HYSRA Q +P+I
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 193 YVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 252
YVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 123 YVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 253 YICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 312
ICSRYYRAPELIFGAT+YT++ID+WS GCVLAELLLGQP+FPG+SGVDQLVEIIKVLGT
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 313 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
PTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T LEAC
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 373 IHPFFYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQ 423
H FF ELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR Q
Sbjct: 302 AHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHARIQ 351
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 494 bits (1272), Expect = e-140, Method: Compositional matrix adjust.
Identities = 240/349 (68%), Positives = 285/349 (81%), Gaps = 6/349 (1%)
Query: 77 VTTIGGRNGQPK---QTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR 133
VTT+ GQ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQDKR+KNR
Sbjct: 4 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR 63
Query: 134 ELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEFVPETVYRVAKHYSRASQRMPLI 192
ELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL++VPETVYRVA+HYSRA Q +P+I
Sbjct: 64 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 123
Query: 193 YVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 252
YVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 124 YVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 182
Query: 253 YICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 312
ICSRYYRAPELIFGAT+YT++ID+WS GCVLAELLLGQP+FPG+SGVDQLVEIIKVLGT
Sbjct: 183 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 242
Query: 313 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
PTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T LEAC
Sbjct: 243 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 302
Query: 373 IHPFFYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHAR 421
H FF ELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR
Sbjct: 303 AHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHAR 350
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 494 bits (1272), Expect = e-140, Method: Compositional matrix adjust.
Identities = 240/349 (68%), Positives = 285/349 (81%), Gaps = 6/349 (1%)
Query: 77 VTTIGGRNGQPK---QTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR 133
VTT+ GQ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQDKR+KNR
Sbjct: 3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR 62
Query: 134 ELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEFVPETVYRVAKHYSRASQRMPLI 192
ELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL++VPETVYRVA+HYSRA Q +P+I
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 193 YVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 252
YVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 123 YVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 253 YICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 312
ICSRYYRAPELIFGAT+YT++ID+WS GCVLAELLLGQP+FPG+SGVDQLVEIIKVLGT
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 313 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
PTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T LEAC
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 373 IHPFFYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHAR 421
H FF ELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR
Sbjct: 302 AHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHAR 349
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 494 bits (1272), Expect = e-140, Method: Compositional matrix adjust.
Identities = 240/349 (68%), Positives = 285/349 (81%), Gaps = 6/349 (1%)
Query: 77 VTTIGGRNGQPK---QTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR 133
VTT+ GQ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQDKR+KNR
Sbjct: 7 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR 66
Query: 134 ELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEFVPETVYRVAKHYSRASQRMPLI 192
ELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL++VPETVYRVA+HYSRA Q +P+I
Sbjct: 67 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 126
Query: 193 YVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 252
YVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 127 YVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 185
Query: 253 YICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 312
ICSRYYRAPELIFGAT+YT++ID+WS GCVLAELLLGQP+FPG+SGVDQLVEIIKVLGT
Sbjct: 186 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 245
Query: 313 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
PTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T LEAC
Sbjct: 246 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 305
Query: 373 IHPFFYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHAR 421
H FF ELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR
Sbjct: 306 AHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHAR 353
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 492 bits (1267), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/349 (68%), Positives = 284/349 (81%), Gaps = 6/349 (1%)
Query: 77 VTTIGGRNGQPK---QTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR 133
VTT+ GQ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQ K +KNR
Sbjct: 3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR 62
Query: 134 ELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEFVPETVYRVAKHYSRASQRMPLI 192
ELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL++VPETVYRVA+HYSRA Q +P+I
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 193 YVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 252
YVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 123 YVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 253 YICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 312
YICSRYYRAPELIFGAT+YT++ID+WS GCVLAELLLGQP+FPG+SGVDQLVEIIKVLGT
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 313 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
PTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T LEAC
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 373 IHPFFYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHAR 421
H FF ELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR
Sbjct: 302 AHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHAR 349
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 491 bits (1265), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/349 (68%), Positives = 284/349 (81%), Gaps = 6/349 (1%)
Query: 77 VTTIGGRNGQPK---QTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR 133
VTT+ GQ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQDKR+KNR
Sbjct: 3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR 62
Query: 134 ELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEFVPETVYRVAKHYSRASQRMPLI 192
ELQ MR LDH N+V L++ F+S+ +K D +YLNLVL++VPETVYRVA+HYSRA Q +P+I
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 193 YVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 252
YVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 123 YVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 253 YICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 312
ICSRYYRAPELIFGAT+YT++ID+WS GCVLAELLLGQP+FPG+SGVDQLVEIIKVLGT
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 313 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
PTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T LEAC
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 373 IHPFFYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHAR 421
H FF ELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR
Sbjct: 302 AHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHAR 349
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 491 bits (1265), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/351 (68%), Positives = 284/351 (80%), Gaps = 6/351 (1%)
Query: 77 VTTIGGRNGQPK---QTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR 133
VTT+ GQ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQ K +KNR
Sbjct: 3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR 62
Query: 134 ELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEFVPETVYRVAKHYSRASQRMPLI 192
ELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL++VPETVYRVA+HYSRA Q +P+I
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 193 YVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 252
YVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 123 YVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 253 YICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 312
YICSRYYRAPELIFGAT+YT++ID+WS GCVLAELLLGQP+FPG+SGVDQLVEIIKVLGT
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 313 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
PTRE+I+ MNPNYTEF FPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T LEAC
Sbjct: 242 PTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 373 IHPFFYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQ 423
H FF ELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR Q
Sbjct: 302 AHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHARIQ 351
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 485 bits (1249), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/349 (67%), Positives = 281/349 (80%), Gaps = 6/349 (1%)
Query: 77 VTTIGGRNGQPK---QTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR 133
VTT+ GQ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQ K +KNR
Sbjct: 3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR 62
Query: 134 ELQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEFVPETVYRVAKHYSRASQRMPLI 192
ELQ MR LDH N+V L++ F+S+ +K DE+YLNLVL++VP TVYRVA+HYSRA Q +P+I
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVI 122
Query: 193 YVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 252
YVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 123 YVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 253 YICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 312
ICSRYYRAPELIFGAT+YT++ID+WS GCVLAELLLGQP+FPG+SGVDQLVEIIKVLGT
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 313 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
PTRE+I+ MNPNYTEF FPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T LEAC
Sbjct: 242 PTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 373 IHPFFYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHAR 421
H FF ELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR
Sbjct: 302 AHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHAR 349
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 470 bits (1209), Expect = e-133, Method: Compositional matrix adjust.
Identities = 223/350 (63%), Positives = 281/350 (80%), Gaps = 5/350 (1%)
Query: 75 IIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE 134
I V G+ G+ ++ I+Y +V+G GSFG+VFQAK +E+ E VAIKKVLQDKR+KNRE
Sbjct: 25 IKVLASDGKTGEQRE-IAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRE 82
Query: 135 LQTMRLLDHPNVVSLKHCFFSTTDK-DELYLNLVLEFVPETVYRVAKHYSRASQRMPLIY 193
LQ MR++ HPNVV LK F+S DK DE++LNLVLE+VPETVYR ++HY++ Q MP++
Sbjct: 83 LQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLL 142
Query: 194 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 253
+KLY YQ+ R+LAYIH IG+CHRDIKPQNLL++P + +KL DFGSAK+L+ GEPN+S
Sbjct: 143 IKLYMYQLLRSLAYIHS-IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSX 201
Query: 254 ICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 313
ICSRYYRAPELIFGAT YTT IDIWS GCV+AEL+ GQPLFPGESG+DQLVEIIKVLGTP
Sbjct: 202 ICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTP 261
Query: 314 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACI 373
+RE+IK MNPNY E KFPQI+ HP+ K+F R PP+A+DL+SRLL+Y+P+ R TA+EA
Sbjct: 262 SREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321
Query: 374 HPFFYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQ 423
HPFF ELR AR+PNGR PPLFN+ +EL +L+S+L+P+HA +
Sbjct: 322 HPFFDELRTGEARMPNGRELPPLFNWTKEEL-SVRPDLISRLVPQHAEAE 370
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 336 bits (862), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 163/369 (44%), Positives = 240/369 (65%), Gaps = 43/369 (11%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHC 152
Y + +G GSFGIV + +E+G+ A+KKVLQD RYKNREL M++LDH N++ L
Sbjct: 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDY 68
Query: 153 FFSTTDKD---------------------------------ELYLNLVLEFVPETVYRVA 179
F++T D++ YLN+++E+VP+T+++V
Sbjct: 69 FYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVL 128
Query: 180 KHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFG 239
K + R+ + +P+ + +Y YQ+ RA+ +IH +G+CHRDIKPQNLLVN + +KLCDFG
Sbjct: 129 KSFIRSGRSIPMNLISIYIYQLFRAVGFIHS-LGICHRDIKPQNLLVNSKDNTLKLCDFG 187
Query: 240 SAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESG 299
SAK L+ EP+++ ICSR+YRAPEL+ GATEYT +ID+WS+GCV EL+LG+PLF GE+
Sbjct: 188 SAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETS 247
Query: 300 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQ 359
+DQLV II+++GTPT+E++ MNP+YTE +FP +KA W KI + P A+DL+ ++L+
Sbjct: 248 IDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILR 307
Query: 360 YSPNLRCTALEACIHPFFYELRDP-------NARLPNG--RPFPPLFNFKPQELKGASKE 410
Y P+LR EA HPFF LR+ N+ P+G + P LFNF P EL
Sbjct: 308 YEPDLRINPYEAMAHPFFDHLRNSYESEVKNNSNFPHGVNQNIPQLFNFSPYELSIIPGN 367
Query: 411 LLSKLIPEH 419
+L++++P++
Sbjct: 368 VLNRILPKN 376
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 319 bits (817), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 159/339 (46%), Positives = 226/339 (66%), Gaps = 10/339 (2%)
Query: 88 KQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMR---LLDHP 144
K+ + ER+ GQG+FG V K TG +VAIKKV+QD R++NRELQ M+ +L HP
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHP 79
Query: 145 NVVSLKHCFFSTTDKD--ELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQIC 202
N+V L+ F++ ++D ++YLN+V+E+VP+T++R ++Y R P I +K++ +Q+
Sbjct: 80 NIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLI 139
Query: 203 RALAYIH-GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRA 261
R++ +H + VCHRDIKP N+LVN +KLCDFGSAK L EPN++YICSRYYRA
Sbjct: 140 RSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRA 199
Query: 262 PELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 321
PELIFG YTTA+DIWSVGC+ AE++LG+P+F G++ QL EI++VLG P+RE ++ +
Sbjct: 200 PELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKL 259
Query: 322 NPNYTEFKFPQIKAHPWHKIFHK---RMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFY 378
NP++T+ K PW +F + EA DL+S LLQY P R EA HP+F
Sbjct: 260 NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFD 319
Query: 379 ELRDPNARLPNGRPFP-PLFNFKPQELKGASKELLSKLI 416
EL DP +LPN + P LF F P E++ S+ +KL+
Sbjct: 320 ELHDPATKLPNNKDLPEDLFRFLPNEIEVMSEAQKAKLV 358
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 181 bits (459), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 118/345 (34%), Positives = 189/345 (54%), Gaps = 28/345 (8%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVV 147
Y + +G+G++G+V A VAIKK+ + + Y R L+ +++L H NV+
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
++ ++T + + +V + + +Y++ K SQ++ ++ + YQI R L Y
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLK-----SQQLSNDHICYFLYQILRGLKY 159
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY----ICSRYYRAPE 263
IH V HRD+KP NLL+N T +K+CDFG A++ + + + +R+YRAPE
Sbjct: 160 IHSA-NVLHRDLKPSNLLINT-TCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPE 217
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM-- 321
++ + YT +IDIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 277
Query: 322 --NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYE 379
NY + P W K+F K +A+DL+ R+L ++PN R T EA HP+ +
Sbjct: 278 MKARNYLQ-SLPSKTKVAWAKLFPKS-DSKALDLLDRMLTFNPNKRITVEEALAHPYLEQ 335
Query: 380 LRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLI-PEHARKQ 423
DP P F F EL KE L +LI E AR Q
Sbjct: 336 YYDPTDEPVAEEP----FTFA-MELDDLPKERLKELIFQETARFQ 375
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/326 (32%), Positives = 181/326 (55%), Gaps = 29/326 (8%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLLDH---PNV 146
+ + ++G+G++G+V A TGE VAIKK+ + R L+ +++L H N+
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALA 206
+++ F+ D + N ++ + + + H ++Q + +++ + YQ RA+
Sbjct: 72 ITI----FNIQRPDS-FENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVK 126
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS-----------YIC 255
+HG V HRD+KP NLL+N + +K+CDFG A+++ + + S Y+
Sbjct: 127 VLHGS-NVIHRDLKPSNLLINSNC-DLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVA 184
Query: 256 SRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP-T 314
+R+YRAPE++ + +Y+ A+D+WS GC+LAEL L +P+FPG QL+ I ++GTP +
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 315 REEIKCM-NPNYTEF--KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEA 371
+++C+ +P E+ P A P K+F R+ P+ +DL+ R+L + P R TA EA
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 372 CIHPFFYELRDPNARLPNGRPFPPLF 397
HP+ DPN P G P PP F
Sbjct: 304 LEHPYLQTYHDPNDE-PEGEPIPPSF 328
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 178/317 (56%), Gaps = 32/317 (10%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------REL 135
G G P+ ++ +G+G++G+V++A+ TGE VA+KK+ D + RE+
Sbjct: 1 GPLGSPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI 60
Query: 136 QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVK 195
++ L+HPN+V L + +++LYL V EF+ + + + + A +PL +K
Sbjct: 61 SLLKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIK 113
Query: 196 LYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY-- 253
Y +Q+ + LA+ H V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 114 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTH 169
Query: 254 -ICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 312
+ + +YRAPE++ G Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 170 EVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 229
Query: 313 PTREEIKCMN--PNYTEFKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRC 366
P + P+Y FP+ W + F K +PP + L+S++L Y PN R
Sbjct: 230 PDEVVWPGVTSMPDYKP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI 283
Query: 367 TALEACIHPFFYELRDP 383
+A A HPFF ++ P
Sbjct: 284 SAKAALAHPFFQDVTKP 300
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/326 (32%), Positives = 182/326 (55%), Gaps = 29/326 (8%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLLDH---PNV 146
+ + ++G+G++G+V A TGE VAIKK+ + R L+ +++L H N+
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALA 206
+++ F+ D + N ++ + + + H ++Q + +++ + YQ RA+
Sbjct: 72 ITI----FNIQRPDS-FENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVK 126
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-----EPN------ISYIC 255
+HG V HRD+KP NLL+N + +K+CDFG A+++ + EP + ++
Sbjct: 127 VLHGS-NVIHRDLKPSNLLINSNC-DLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVA 184
Query: 256 SRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP-T 314
+R+YRAPE++ + +Y+ A+D+WS GC+LAEL L +P+FPG QL+ I ++GTP +
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 315 REEIKCM-NPNYTEF--KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEA 371
+++C+ +P E+ P A P K+F R+ P+ +DL+ R+L + P R TA EA
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 372 CIHPFFYELRDPNARLPNGRPFPPLF 397
HP+ DPN P G P PP F
Sbjct: 304 LEHPYLQTYHDPNDE-PEGEPIPPSF 328
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 178/317 (56%), Gaps = 32/317 (10%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------REL 135
G G P+ ++ +G+G++G+V++A+ TGE VA+KK+ D + RE+
Sbjct: 1 GPLGSPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI 60
Query: 136 QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVK 195
++ L+HPN+V L + +++LYL V EF+ + + + + A +PL +K
Sbjct: 61 SLLKELNHPNIVKLLDVIHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIK 113
Query: 196 LYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY-- 253
Y +Q+ + LA+ H V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 114 SYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTH 169
Query: 254 -ICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 312
+ + +YRAPE++ G Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGT
Sbjct: 170 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 229
Query: 313 PTREEIKCMN--PNYTEFKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRC 366
P + P+Y FP+ W + F K +PP + L+S++L Y PN R
Sbjct: 230 PDEVVWPGVTSMPDYKP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI 283
Query: 367 TALEACIHPFFYELRDP 383
+A A HPFF ++ P
Sbjct: 284 SAKAALAHPFFQDVTKP 300
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 112/309 (36%), Positives = 175/309 (56%), Gaps = 32/309 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V EF+ + + + + A +PL +K Y +Q+ + LA+ H
Sbjct: 75 IHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH- 126
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 127 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 183
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 243
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 244 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 297
Query: 384 NARLPNGRP 392
L RP
Sbjct: 298 VPHLRLERP 306
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 177 bits (449), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 172/300 (57%), Gaps = 32/300 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V EF+ + + + + A +PL +K Y +Q+ + LA+ H
Sbjct: 71 IHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH- 122
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 123 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGXK 179
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 240 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 172/300 (57%), Gaps = 32/300 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V EF+ + + + + A +PL +K Y +Q+ + LA+ H
Sbjct: 73 IHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH- 124
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 125 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 242 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 172/300 (57%), Gaps = 32/300 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V EF+ + + + + A +PL +K Y +Q+ + LA+ H
Sbjct: 72 IHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH- 123
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 124 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 180
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 241 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 168/303 (55%), Gaps = 26/303 (8%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV 146
Y VG+G++G+V++AK G VA+K++ D + RE+ ++ L HPN+
Sbjct: 23 YQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALA 206
VSL S E L LV EF+ + + +V Q +K+Y YQ+ R +A
Sbjct: 82 VSLIDVIHS-----ERCLTLVFEFMEKDLKKVLDENKTGLQDSQ---IKIYLYQLLRGVA 133
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPE 263
+ H + HRD+KPQNLL+N +KL DFG A+ G P SY + + +YRAP+
Sbjct: 134 HCHQH-RILHRDLKPQNLLINSDG-ALKLADFGLARAF--GIPVRSYTHEVVTLWYRAPD 189
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN- 322
++ G+ +Y+T++DIWS+GC+ AE++ G+PLFPG + DQL +I +LGTP E +
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQE 249
Query: 323 -PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELR 381
P + + F + PW I E +DL+S +L + PN R +A +A HP+F +L
Sbjct: 250 LPLWKQRTFQVFEKKPWSSII-PGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL- 307
Query: 382 DPN 384
DP
Sbjct: 308 DPQ 310
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 172/300 (57%), Gaps = 32/300 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V EF+ + + + + A +PL +K Y +Q+ + LA+ H
Sbjct: 70 IHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH- 121
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 122 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 239 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 172/300 (57%), Gaps = 32/300 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V EF+ + + + + A +PL +K Y +Q+ + LA+ H
Sbjct: 74 IHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH- 125
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 126 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 243 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 172/300 (57%), Gaps = 32/300 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V EF+ + + + + A +PL +K Y +Q+ + LA+ H
Sbjct: 73 IHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH- 124
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 125 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 242 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 172/300 (57%), Gaps = 32/300 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V EF+ + + + + A +PL +K Y +Q+ + LA+ H
Sbjct: 71 IHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH- 122
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 123 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 240 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 172/300 (57%), Gaps = 32/300 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V EF+ + + + + A +PL +K Y +Q+ + LA+ H
Sbjct: 71 IHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH- 122
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 123 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 240 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 172/300 (57%), Gaps = 32/300 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V EF+ + + + + A +PL +K Y +Q+ + LA+ H
Sbjct: 71 IHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH- 122
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 123 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 240 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 172/300 (57%), Gaps = 32/300 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V EF+ + + + + A +PL +K Y +Q+ + LA+ H
Sbjct: 70 IHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH- 121
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 122 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 239 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 172/300 (57%), Gaps = 32/300 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V EF+ + + + + A +PL +K Y +Q+ + LA+ H
Sbjct: 72 IHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH- 123
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 124 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 241 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 172/300 (57%), Gaps = 32/300 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V EF+ + + + + A +PL +K Y +Q+ + LA+ H
Sbjct: 71 IHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH- 122
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 123 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 240 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 172/300 (57%), Gaps = 32/300 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V EF+ + + + + A +PL +K Y +Q+ + LA+ H
Sbjct: 70 IHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH- 121
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 122 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 239 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/297 (36%), Positives = 167/297 (56%), Gaps = 26/297 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
VG+G++G+V++AK G VA+K++ D + RE+ ++ L HPN+VSL
Sbjct: 29 VGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
S E L LV EF+ + + +V Q +K+Y YQ+ R +A+ H
Sbjct: 88 IHS-----ERCLTLVFEFMEKDLKKVLDENKTGLQDSQ---IKIYLYQLLRGVAHCHQH- 138
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
+ HRD+KPQNLL+N +KL DFG A+ G P SY + + +YRAP+++ G+
Sbjct: 139 RILHRDLKPQNLLINSDG-ALKLADFGLARAF--GIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
+Y+T++DIWS+GC+ AE++ G+PLFPG + DQL +I +LGTP E + P + +
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ 255
Query: 328 FKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPN 384
F + PW I E +DL+S +L + PN R +A +A HP+F +L DP
Sbjct: 256 RTFQVFEKKPWSSII-PGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL-DPQ 310
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 172/300 (57%), Gaps = 32/300 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V EF+ + + + + A +PL +K Y +Q+ + LA+ H
Sbjct: 71 IHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH- 122
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 123 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 240 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 172/300 (57%), Gaps = 32/300 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V EF+ + + + + A +PL +K Y +Q+ + LA+ H
Sbjct: 74 IHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH- 125
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 126 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 243 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 172/300 (57%), Gaps = 32/300 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V EF+ + + + + A +PL +K Y +Q+ + LA+ H
Sbjct: 70 IHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH- 121
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 122 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 239 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 172/300 (57%), Gaps = 32/300 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V EF+ + + + + A +PL +K Y +Q+ + LA+ H
Sbjct: 72 IHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH- 123
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 124 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 241 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 187/349 (53%), Gaps = 33/349 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVV 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
+ + T + + +V + + +Y++ K +Q + ++ + YQI R L Y
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKY 143
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYR 260
IH V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YR
Sbjct: 144 IHSA-NVLHRDLKPSNLLLNT-TXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYR 198
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 320
APE++ + YT +IDIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 258
Query: 321 M----NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ NY P PW+++F +A+DL+ ++L ++P+ R +A HP+
Sbjct: 259 IINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316
Query: 377 FYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 425
+ DP+ PF F+ EL KE L +LI E + P
Sbjct: 317 LEQYYDPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 360
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 180/326 (55%), Gaps = 29/326 (8%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLLDH---PNV 146
+ + ++G+G++G+V A TGE VAIKK+ + R L+ +++L H N+
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALA 206
+++ F+ D + N ++ + + + H ++Q + +++ + YQ RA+
Sbjct: 72 ITI----FNIQRPDS-FENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVK 126
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS-----------YIC 255
+HG V HRD+KP NLL+N + +K+CDFG A+++ + + S +
Sbjct: 127 VLHGS-NVIHRDLKPSNLLINSNC-DLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVA 184
Query: 256 SRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP-T 314
+R+YRAPE++ + +Y+ A+D+WS GC+LAEL L +P+FPG QL+ I ++GTP +
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 315 REEIKCM-NPNYTEF--KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEA 371
+++C+ +P E+ P A P K+F R+ P+ +DL+ R+L + P R TA EA
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 372 CIHPFFYELRDPNARLPNGRPFPPLF 397
HP+ DPN P G P PP F
Sbjct: 304 LEHPYLQTYHDPNDE-PEGEPIPPSF 328
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 172/300 (57%), Gaps = 32/300 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V EF+ + + + + A +PL +K Y +Q+ + LA+ H
Sbjct: 75 IHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH- 126
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 127 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 183
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 243
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 244 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 297
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/300 (36%), Positives = 172/300 (57%), Gaps = 32/300 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V EF+ + + + + A +PL +K Y +Q+ + L++ H
Sbjct: 71 IHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLSFCHSH- 122
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 123 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 240 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 171/300 (57%), Gaps = 32/300 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V E V + + + + A +PL +K Y +Q+ + LA+ H
Sbjct: 74 IHT---ENKLYL--VFEHVDQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH- 125
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 126 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 243 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/300 (36%), Positives = 172/300 (57%), Gaps = 32/300 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V EF+ + + + + A +PL +K Y +Q+ + LA+ H
Sbjct: 73 IHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH- 124
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KP+NLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 125 RVLHRDLKPENLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 242 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 172/302 (56%), Gaps = 36/302 (11%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQR--MPLIYVKLYTYQICRALAYIHG 210
+ +++LYL V EF+ + K + AS +PL +K Y +Q+ + LA+ H
Sbjct: 73 IHT---ENKLYL--VFEFLSMDL----KDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 267
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 124 H-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 179
Query: 268 ATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 325
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 239
Query: 326 TEFKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELR 381
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++
Sbjct: 240 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
Query: 382 DP 383
P
Sbjct: 294 KP 295
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 171/300 (57%), Gaps = 32/300 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V EF+ + + + A +PL +K Y +Q+ + LA+ H
Sbjct: 74 IHT---ENKLYL--VFEFLHQDLKTFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH- 125
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 126 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 243 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/300 (36%), Positives = 172/300 (57%), Gaps = 32/300 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V EF+ + + + + A +PL +K Y +Q+ + LA+ H
Sbjct: 72 IHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH- 123
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KP+NLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 124 RVLHRDLKPENLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 241 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 172/302 (56%), Gaps = 36/302 (11%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQR--MPLIYVKLYTYQICRALAYIHG 210
+ +++LYL V E V++ K + AS +PL +K Y +Q+ + LA+ H
Sbjct: 70 IHT---ENKLYL------VFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 267
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 121 H-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 176
Query: 268 ATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 325
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 326 TEFKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELR 381
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++
Sbjct: 237 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
Query: 382 DP 383
P
Sbjct: 291 KP 292
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 186/343 (54%), Gaps = 33/343 (9%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 153
+G+G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 154 FSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIG 213
+ T + + +V + + +Y++ K +Q + ++ + YQI R L YIH
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 144
Query: 214 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 266
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 145 VLHRDLKPSNLLLNT-TXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----N 322
+ YT +IDIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 260
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRD 382
NY P PW+++F +A+DL+ ++L ++P+ R +A HP+ + D
Sbjct: 261 RNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 318
Query: 383 PNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 425
P+ PF F+ EL KE L +LI E + P
Sbjct: 319 PSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 356
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/349 (32%), Positives = 186/349 (53%), Gaps = 33/349 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVV 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
+ + T + + LV + +Y++ K +Q + ++ + YQI R L Y
Sbjct: 105 GINDIIRAPTIEQMKDVYLVTHLMGADLYKLLK-----TQHLSNDHICYFLYQILRGLKY 159
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYR 260
IH V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YR
Sbjct: 160 IHSA-NVLHRDLKPSNLLLNT-TXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYR 214
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 320
APE++ + YT +IDIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 274
Query: 321 M----NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ NY P PW+++F +A+DL+ ++L ++P+ R +A HP+
Sbjct: 275 IINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 332
Query: 377 FYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 425
+ DP+ PF F+ EL KE L +LI E + P
Sbjct: 333 LEQYYDPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 376
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 172/302 (56%), Gaps = 36/302 (11%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQR--MPLIYVKLYTYQICRALAYIHG 210
+ +++LYL V EF+ + K + AS +PL +K Y +Q+ + LA+ H
Sbjct: 74 IHT---ENKLYL--VFEFLSMDL----KDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 267
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 125 H-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 180
Query: 268 ATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 325
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 326 TEFKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELR 381
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++
Sbjct: 241 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
Query: 382 DP 383
P
Sbjct: 295 KP 296
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 187/349 (53%), Gaps = 33/349 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVV 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
+ + T + + +V + + +Y++ K +Q + ++ + YQI R L Y
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKY 143
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYR 260
IH V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YR
Sbjct: 144 IHSA-NVLHRDLKPSNLLLNT-TXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYR 198
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 320
APE++ + YT +IDIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 258
Query: 321 M----NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ NY P PW+++F +A+DL+ ++L ++P+ R +A HP+
Sbjct: 259 IINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316
Query: 377 FYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 425
+ DP+ PF F+ EL KE L +LI E + P
Sbjct: 317 LEQYYDPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 360
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 108/300 (36%), Positives = 171/300 (57%), Gaps = 32/300 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V EF+ + + + A +PL +K Y +Q+ + LA+ H
Sbjct: 72 IHT---ENKLYL--VFEFLSMDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH- 123
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KP+NLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 124 RVLHRDLKPENLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 241 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 108/300 (36%), Positives = 171/300 (57%), Gaps = 32/300 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V EF+ + + + A +PL +K Y +Q+ + LA+ H
Sbjct: 74 IHT---ENKLYL--VFEFLSMDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH- 125
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KP+NLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 126 RVLHRDLKPENLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 243 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 184/342 (53%), Gaps = 31/342 (9%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 153
+G+G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 154 FSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIG 213
+ T + + +V + + +Y++ K +Q + ++ + YQI R L YIH
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 146
Query: 214 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 266
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 147 VLHRDLKPSNLLLNT-TSDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC---MNP 323
+ YT +IDIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C +
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKA 262
Query: 324 NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
P PW+++F +A+DL+ ++L ++P+ R +A HP+ + DP
Sbjct: 263 RNYLLSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDP 321
Query: 384 NARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 425
+ PF F+ EL KE L +LI E + P
Sbjct: 322 SDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 358
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 108/300 (36%), Positives = 171/300 (57%), Gaps = 32/300 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+ K+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V EF+ + + + + A +PL +K Y +Q+ + LA+ H
Sbjct: 71 IHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH- 122
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 123 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 240 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 108/300 (36%), Positives = 171/300 (57%), Gaps = 32/300 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+ K+ D + RE+ ++ L+HPN+V L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V EF+ + + + + A +PL +K Y +Q+ + LA+ H
Sbjct: 70 IHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH- 121
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 122 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 239 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 170/296 (57%), Gaps = 32/296 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +++LYL V EF+ + + + + A +PL +K Y +Q+ + LA+ H
Sbjct: 71 IHT---ENKLYL--VFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH- 122
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 123 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 327
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 328 FKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYE 379
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF +
Sbjct: 240 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 174 bits (441), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 187/349 (53%), Gaps = 33/349 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVV 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
+ + T + + +V + + +Y++ K +Q + ++ + YQI R L Y
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKY 141
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYR 260
IH V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YR
Sbjct: 142 IHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYR 196
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 320
APE++ + YT +IDIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 256
Query: 321 M----NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ NY P PW+++F +A+DL+ ++L ++P+ R +A HP+
Sbjct: 257 IINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 314
Query: 377 FYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 425
+ DP+ PF F+ EL KE L +LI E + P
Sbjct: 315 LAQYYDPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 358
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 187/349 (53%), Gaps = 33/349 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVV 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N++
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
+ + T + + +V + + +Y++ K +Q + ++ + YQI R L Y
Sbjct: 93 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKY 147
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYR 260
IH V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YR
Sbjct: 148 IHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYR 202
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 320
APE++ + YT +IDIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C
Sbjct: 203 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 262
Query: 321 M----NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ NY P PW+++F +A+DL+ ++L ++P+ R +A HP+
Sbjct: 263 IINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 320
Query: 377 FYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 425
+ DP+ PF F+ EL KE L +LI E + P
Sbjct: 321 LEQYYDPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 364
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 187/349 (53%), Gaps = 33/349 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVV 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
+ + T + + +V + + +Y++ K +Q + ++ + YQI R L Y
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKY 139
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYR 260
IH V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YR
Sbjct: 140 IHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYR 194
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 320
APE++ + YT +IDIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 254
Query: 321 M----NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ NY P PW+++F +A+DL+ ++L ++P+ R +A HP+
Sbjct: 255 IINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 312
Query: 377 FYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 425
+ DP+ PF F+ EL KE L +LI E + P
Sbjct: 313 LEQYYDPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 356
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 186/343 (54%), Gaps = 33/343 (9%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 153
+G+G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 154 FSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIG 213
+ T + + +V + + +Y++ K +Q + ++ + YQI R L YIH
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 146
Query: 214 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 266
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 147 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----N 322
+ YT +IDIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 262
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRD 382
NY P PW+++F +A+DL+ ++L ++P+ R +A HP+ + D
Sbjct: 263 RNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 320
Query: 383 PNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 425
P+ PF F+ EL KE L +LI E + P
Sbjct: 321 PSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 358
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 173/302 (57%), Gaps = 36/302 (11%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQR--MPLIYVKLYTYQICRALAYIHG 210
+ +++LYL V EF+ + + K + AS +PL +K Y +Q+ + LA+ H
Sbjct: 71 IHT---ENKLYL--VFEFLHQDL----KDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 267
V HRD+KP+NLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 122 H-RVLHRDLKPENLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 177
Query: 268 ATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 325
Y+TA+DIWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 326 TEFKFPQIKAHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELR 381
FP+ W + F K +PP + L+S++L Y PN R +A A HPFF ++
Sbjct: 238 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
Query: 382 DP 383
P
Sbjct: 292 KP 293
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 187/349 (53%), Gaps = 33/349 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVV 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
+ + T + + +V + + +Y++ K +Q + ++ + YQI R L Y
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKY 139
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYR 260
IH V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YR
Sbjct: 140 IHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYR 194
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 320
APE++ + YT +IDIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 254
Query: 321 M----NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ NY P PW+++F +A+DL+ ++L ++P+ R +A HP+
Sbjct: 255 IINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 312
Query: 377 FYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 425
+ DP+ PF F+ EL KE L +LI E + P
Sbjct: 313 LEQYYDPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 356
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 187/349 (53%), Gaps = 33/349 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVV 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
+ + T + + +V + + +Y++ K +Q + ++ + YQI R L Y
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKY 144
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYR 260
IH V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YR
Sbjct: 145 IHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYR 199
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 320
APE++ + YT +IDIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C
Sbjct: 200 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 259
Query: 321 M----NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ NY P PW+++F +A+DL+ ++L ++P+ R +A HP+
Sbjct: 260 IINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 317
Query: 377 FYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 425
+ DP+ PF F+ EL KE L +LI E + P
Sbjct: 318 LEQYYDPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 361
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 187/349 (53%), Gaps = 33/349 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVV 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N++
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
+ + T + + +V + + +Y++ K +Q + ++ + YQI R L Y
Sbjct: 91 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKY 145
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYR 260
IH V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YR
Sbjct: 146 IHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYR 200
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 320
APE++ + YT +IDIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C
Sbjct: 201 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 260
Query: 321 M----NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ NY P PW+++F +A+DL+ ++L ++P+ R +A HP+
Sbjct: 261 IINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 318
Query: 377 FYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 425
+ DP+ PF F+ EL KE L +LI E + P
Sbjct: 319 LEQYYDPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 362
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 187/349 (53%), Gaps = 33/349 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVV 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N++
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
+ + T + + +V + + +Y++ K +Q + ++ + YQI R L Y
Sbjct: 82 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKY 136
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYR 260
IH V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YR
Sbjct: 137 IHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYR 191
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 320
APE++ + YT +IDIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C
Sbjct: 192 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 251
Query: 321 M----NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ NY P PW+++F +A+DL+ ++L ++P+ R +A HP+
Sbjct: 252 IINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 309
Query: 377 FYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 425
+ DP+ PF F+ EL KE L +LI E + P
Sbjct: 310 LEQYYDPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 353
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 187/349 (53%), Gaps = 33/349 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVV 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
+ + T + + +V + + +Y++ K +Q + ++ + YQI R L Y
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKY 143
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYR 260
IH V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YR
Sbjct: 144 IHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYR 198
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 320
APE++ + YT +IDIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 258
Query: 321 M----NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ NY P PW+++F +A+DL+ ++L ++P+ R +A HP+
Sbjct: 259 IINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316
Query: 377 FYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 425
+ DP+ PF F+ EL KE L +LI E + P
Sbjct: 317 LEQYYDPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 360
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 187/349 (53%), Gaps = 33/349 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVV 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
+ + T + + +V + + +Y++ K +Q + ++ + YQI R L Y
Sbjct: 105 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKY 159
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYR 260
IH V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YR
Sbjct: 160 IHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYR 214
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 320
APE++ + YT +IDIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 274
Query: 321 M----NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ NY P PW+++F +A+DL+ ++L ++P+ R +A HP+
Sbjct: 275 IINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 332
Query: 377 FYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 425
+ DP+ PF F+ EL KE L +LI E + P
Sbjct: 333 LEQYYDPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 376
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 187/349 (53%), Gaps = 33/349 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVV 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
+ + T + + +V + + +Y++ K +Q + ++ + YQI R L Y
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKY 137
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYR 260
IH V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YR
Sbjct: 138 IHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYR 192
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 320
APE++ + YT +IDIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C
Sbjct: 193 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 252
Query: 321 M----NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ NY P PW+++F +A+DL+ ++L ++P+ R +A HP+
Sbjct: 253 IINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 310
Query: 377 FYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 425
+ DP+ PF F+ EL KE L +LI E + P
Sbjct: 311 LEQYYDPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 354
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 182/341 (53%), Gaps = 22/341 (6%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKK------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
+G G++G+V A+ TG+ VAIKK V+ + + REL+ ++ H N++++K
Sbjct: 61 TIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKD 120
Query: 152 CFFSTTDKDEL-YLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
T E + +VL+ + ++++ +SQ + L +V+ + YQ+ R L Y+H
Sbjct: 121 ILRPTVPYGEFKSVYVVLDLMESDLHQII----HSSQPLTLEHVRYFLYQLLRGLKYMHS 176
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-----ISYICSRYYRAPELI 265
V HRD+KP NLLVN + ++K+ DFG A+ L Y+ +R+YRAPEL+
Sbjct: 177 A-QVIHRDLKPSNLLVNENC-ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 234
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 325
EYT AID+WSVGC+ E+L + LFPG++ V QL I+ VLGTP+ I+ +
Sbjct: 235 LSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAER 294
Query: 326 TEF---KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRD 382
P + PW ++ +A+ L+ R+L++ P+ R +A A HPF + D
Sbjct: 295 VRAYIQSLPPRQPVPWETVY-PGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHD 353
Query: 383 PNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQ 423
P+ PF F+ + + + +++++ HAR++
Sbjct: 354 PDDEPDCAPPFDFAFDREALTRERIKEAIVAEIEDFHARRE 394
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 180/339 (53%), Gaps = 57/339 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQ------DKRYKNRELQTM-RLLDHPN 145
Y + +G+G++GIV+++ TGE VA+KK+ D + RE+ + L H N
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 146 VVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+V+L + + D+D + LV +++ ++ V RA+ P ++ + YQ+ + +
Sbjct: 71 IVNLLNVLRADNDRD---VYLVFDYMETDLHAVI----RANILEP-VHKQYVVYQLIKVI 122
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVK------------------- 246
Y+H G G+ HRD+KP N+L+N H VK+ DFG ++ V
Sbjct: 123 KYLHSG-GLLHRDMKPSNILLNAECH-VKVADFGLSRSFVNIRRVTNNIPLSINENTENF 180
Query: 247 --GEPNIS-YICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQL 303
+P ++ Y+ +R+YRAPE++ G+T+YT ID+WS+GC+L E+L G+P+FPG S ++QL
Sbjct: 181 DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL 240
Query: 304 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH-------------PWHKIFHKRMPP-- 348
II V+ P+ E+++ + + + +K W + K P
Sbjct: 241 ERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKAD 300
Query: 349 ---EAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPN 384
EA+DL+ +LLQ++PN R +A +A HPF +PN
Sbjct: 301 CNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPN 339
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 186/349 (53%), Gaps = 33/349 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVV 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
+ + T + + +V + + +Y++ K +Q + ++ + YQI R L Y
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKY 137
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYR 260
IH V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YR
Sbjct: 138 IHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYR 192
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 320
APE++ + YT +IDIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P +E++ C
Sbjct: 193 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNC 252
Query: 321 M----NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ NY P PW+++F +A+DL+ ++L ++P+ R +A HP+
Sbjct: 253 IINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 310
Query: 377 FYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 425
+ DP+ PF F+ EL KE L +LI E + P
Sbjct: 311 LEQYYDPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 354
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 187/349 (53%), Gaps = 33/349 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVV 147
Y +G+G++G+V A VAI+K+ + + Y R L+ +++L H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
+ + T + + +V + + +Y++ K +Q + ++ + YQI R L Y
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKY 143
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYR 260
IH V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YR
Sbjct: 144 IHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYR 198
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 320
APE++ + YT +IDIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 258
Query: 321 M----NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ NY P PW+++F +A+DL+ ++L ++P+ R +A HP+
Sbjct: 259 IINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316
Query: 377 FYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 425
+ DP+ PF F+ EL KE L +LI E + P
Sbjct: 317 LEQYYDPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 360
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 186/349 (53%), Gaps = 33/349 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVV 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
+ + T + + +V + + +Y++ K Q + ++ + YQI R L Y
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----CQHLSNDHICYFLYQILRGLKY 143
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYR 260
IH V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YR
Sbjct: 144 IHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYR 198
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 320
APE++ + YT +IDIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 258
Query: 321 M----NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ NY P PW+++F +A+DL+ ++L ++P+ R +A HP+
Sbjct: 259 IINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316
Query: 377 FYELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 425
+ DP+ PF F+ EL KE L +LI E + P
Sbjct: 317 LEQYYDPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 360
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 182/341 (53%), Gaps = 22/341 (6%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKK------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
+G G++G+V A+ TG+ VAIKK V+ + + REL+ ++ H N++++K
Sbjct: 62 TIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKD 121
Query: 152 CFFSTTDKDEL-YLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
T E + +VL+ + ++++ +SQ + L +V+ + YQ+ R L Y+H
Sbjct: 122 ILRPTVPYGEFKSVYVVLDLMESDLHQII----HSSQPLTLEHVRYFLYQLLRGLKYMHS 177
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-----ISYICSRYYRAPELI 265
V HRD+KP NLLVN + ++K+ DFG A+ L Y+ +R+YRAPEL+
Sbjct: 178 A-QVIHRDLKPSNLLVNENC-ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 235
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 325
EYT AID+WSVGC+ E+L + LFPG++ V QL I+ VLGTP+ I+ +
Sbjct: 236 LSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAER 295
Query: 326 TEF---KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRD 382
P + PW ++ +A+ L+ R+L++ P+ R +A A HPF + D
Sbjct: 296 VRAYIQSLPPRQPVPWETVY-PGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHD 354
Query: 383 PNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQ 423
P+ PF F+ + + + +++++ HAR++
Sbjct: 355 PDDEPDCAPPFDFAFDREALTRERIKEAIVAEIEDFHARRE 395
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 185/346 (53%), Gaps = 27/346 (7%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVV 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
+ + T + + +V + + +Y++ K +Q + ++ + YQI R L Y
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKY 143
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY----ICSRYYRAPE 263
IH V HRD+KP NLL+N T +K+CDFG A+V + + + +R+YRAPE
Sbjct: 144 IHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 201
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM-- 321
++ + YT +IDIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261
Query: 322 --NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYE 379
NY P PW+++F +A+DL+ ++L ++P+ R +A HP+ +
Sbjct: 262 LKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 380 LRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 425
DP+ PF F+ EL KE L +LI E + P
Sbjct: 320 YYDPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 360
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 185/346 (53%), Gaps = 27/346 (7%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVV 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
+ + T + + +V + + +Y++ K +Q + ++ + YQI R L Y
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKY 144
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY----ICSRYYRAPE 263
IH V HRD+KP NLL+N T +K+CDFG A+V + + + +R+YRAPE
Sbjct: 145 IHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 202
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM-- 321
++ + YT +IDIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 203 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 262
Query: 322 --NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYE 379
NY P PW+++F +A+DL+ ++L ++P+ R +A HP+ +
Sbjct: 263 LKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320
Query: 380 LRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 425
DP+ PF F+ EL KE L +LI E + P
Sbjct: 321 YYDPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 361
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 184/343 (53%), Gaps = 33/343 (9%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 153
+G+G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 154 FSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIG 213
+ T + + +V + + +Y++ K +Q + ++ + YQI R L YIH
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 144
Query: 214 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 266
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 145 VLHRDLKPSNLLLNT-TXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE----IKCMN 322
+ YT +IDIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E+ I
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKA 260
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRD 382
NY P PW+++F +A+DL+ ++L ++P+ R +A HP+ + D
Sbjct: 261 RNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 318
Query: 383 PNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 425
P+ PF F+ EL KE L +LI E + P
Sbjct: 319 PSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 356
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 165/314 (52%), Gaps = 25/314 (7%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPN 145
+Y++ VG G++G V A +GE VAIKK+ Q + + R EL ++ + H N
Sbjct: 43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHEN 102
Query: 146 VVSLKHCFFSTTDKDELY-LNLVLEFVPETVYRV-AKHYSRASQRMPLIYVKLYTYQICR 203
V+ L F + Y LV+ F+ + ++ +S ++ YQ+ +
Sbjct: 103 VIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEK-------IQYLVYQMLK 155
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS-YICSRYYRAP 262
L YIH GV HRD+KP NL VN ++K+ DFG A+ + ++ Y+ +R+YRAP
Sbjct: 156 GLKYIHSA-GVVHRDLKPGNLAVNEDC-ELKILDFGLAR---HADAEMTGYVVTRWYRAP 210
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
E+I Y +DIWSVGC++AE+L G+ LF G+ +DQL +I+KV G P E ++ +N
Sbjct: 211 EVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN 270
Query: 323 PNYTEF---KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYE 379
+ PQ + ++F R P+A DL+ ++L+ + R TA +A HPFF
Sbjct: 271 DKAAKSYIQSLPQTPRKDFTQLF-PRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEP 329
Query: 380 LRDPNARLPNGRPF 393
RDP +PF
Sbjct: 330 FRDPEEETEAQQPF 343
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 166/320 (51%), Gaps = 31/320 (9%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN---------RELQTMRLLDHPNVVSL 149
+G+G F V++A+ T + VAIKK+ R + RE++ ++ L HPN++ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
F ++ ++LV +F+ + + K S + ++K Y + L Y+H
Sbjct: 78 LDAFGHKSN-----ISLVFDFMETDLEVIIKDNSLV---LTPSHIKAYMLMTLQGLEYLH 129
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIF 266
+ HRD+KP NLL++ +KL DFG AK G PN +Y + +R+YRAPEL+F
Sbjct: 130 QH-WILHRDLKPNNLLLD-ENGVLKLADFGLAKSF--GSPNRAYXHQVVTRWYRAPELLF 185
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI--KCMNPN 324
GA Y +D+W+VGC+LAELLL P PG+S +DQL I + LGTPT E+ C P+
Sbjct: 186 GARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPD 245
Query: 325 YTEFK-FPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
Y FK FP I P H IF + +DL+ L ++P R TA +A +F P
Sbjct: 246 YVTFKSFPGI---PLHHIFSA-AGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGP 301
Query: 384 NARLPNGRPFPPLFNFKPQE 403
RP P+ K Q
Sbjct: 302 TPGCQLPRPNCPVETLKEQS 321
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 183/343 (53%), Gaps = 33/343 (9%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 153
+G+G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 154 FSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIG 213
+ T + + +V + + +Y++ K +Q + ++ + YQI R L YIH
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 144
Query: 214 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 266
V HRD+KP NLL+N T +K+ DFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 145 VLHRDLKPSNLLLNT-TXDLKIXDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE----IKCMN 322
+ YT +IDIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E+ I
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKA 260
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRD 382
NY P PW+++F +A+DL+ ++L ++P+ R +A HP+ + D
Sbjct: 261 RNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 318
Query: 383 PNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 425
P+ PF F+ EL KE L +LI E + P
Sbjct: 319 PSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 356
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 165/314 (52%), Gaps = 25/314 (7%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPN 145
+Y++ VG G++G V A +GE VAIKK+ Q + + R EL ++ + H N
Sbjct: 25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHEN 84
Query: 146 VVSLKHCFFSTTDKDELY-LNLVLEFVPETVYRV-AKHYSRASQRMPLIYVKLYTYQICR 203
V+ L F + Y LV+ F+ + ++ +S ++ YQ+ +
Sbjct: 85 VIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEK-------IQYLVYQMLK 137
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS-YICSRYYRAP 262
L YIH GV HRD+KP NL VN ++K+ DFG A+ + ++ Y+ +R+YRAP
Sbjct: 138 GLKYIHSA-GVVHRDLKPGNLAVNEDC-ELKILDFGLAR---HADAEMTGYVVTRWYRAP 192
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
E+I Y +DIWSVGC++AE+L G+ LF G+ +DQL +I+KV G P E ++ +N
Sbjct: 193 EVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN 252
Query: 323 PNYTEF---KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYE 379
+ PQ + ++F R P+A DL+ ++L+ + R TA +A HPFF
Sbjct: 253 DKAAKSYIQSLPQTPRKDFTQLF-PRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEP 311
Query: 380 LRDPNARLPNGRPF 393
RDP +PF
Sbjct: 312 FRDPEEETEAQQPF 325
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/295 (34%), Positives = 164/295 (55%), Gaps = 23/295 (7%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQD------KRYKNRELQTMRLLDHPNVVSLKHC 152
+G+GS+G+VF+ + +TG+ VAIKK L+ K+ RE++ ++ L HPN+V+L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
F + + L+LV E+ TV Y R +P VK T+Q +A+ + H
Sbjct: 71 F-----RRKRRLHLVFEYCDHTVLHELDRYQRG---VPEHLVKSITWQTLQAVNFCHKH- 121
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
HRD+KP+N+L+ H+ +KLCDFG A++L P+ Y + +R+YR+PEL+ G T
Sbjct: 122 NCIHRDVKPENILITKHS-VIKLCDFGFARLLTG--PSDYYDDEVATRWYRSPELLVGDT 178
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT--PTREEIKCMNPNYTE 327
+Y +D+W++GCV AELL G PL+PG+S VDQL I K LG P +++ N ++
Sbjct: 179 QYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG 238
Query: 328 FKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRD 382
K P + ++ + A+ L+ L P R T + HP+F +R+
Sbjct: 239 VKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE 293
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 163/321 (50%), Gaps = 25/321 (7%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDHPNVVSLK 150
R VG G++G V A + VA+KK+ L R REL+ ++ L H NV+ L
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 151 HCFFSTT---DKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
F T D E+YL V + + + K SQ + +V+ YQ+ R L Y
Sbjct: 94 DVFTPATSIEDFSEVYL--VTTLMGADLNNIVK-----SQALSDEHVQFLVYQLLRGLKY 146
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 267
IH G+ HRD+KP N+ VN + ++++ DFG A+ E Y+ +R+YRAPE++
Sbjct: 147 IHSA-GIIHRDLKPSNVAVNEDS-ELRILDFGLARQ--ADEEMTGYVATRWYRAPEIMLN 202
Query: 268 ATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTE 327
Y +DIWSVGC++AELL G+ LFPG +DQL I++V+GTP+ E + ++ +
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHAR 262
Query: 328 F---KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPN 384
P + IF + P A+DL+ R+L + R +A EA H +F + DP
Sbjct: 263 TYIQSLPPMPQKDLSSIF-RGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPE 321
Query: 385 ARLPNGRPFPPLFNFKPQELK 405
P P+ K + L+
Sbjct: 322 DE-PEAEPYDESVEAKERTLE 341
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 157/289 (54%), Gaps = 19/289 (6%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQD------KRYKNRELQTMRLLDHPNVVSLKH 151
+VG+GS+G+V + + +TG VAIKK L+ K+ RE++ ++ L H N+V+L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 152 CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGG 211
K YL V EFV T+ + + + V+ Y +QI + + H
Sbjct: 92 V---CKKKKRWYL--VFEFVDHTILDDLELFPNG---LDYQVVQKYLFQIINGIGFCHSH 143
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVK-GEPNISYICSRYYRAPELIFGATE 270
+ HRDIKP+N+LV+ + VKLCDFG A+ L GE + +R+YRAPEL+ G +
Sbjct: 144 -NIIHRDIKPENILVS-QSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVK 201
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT--PTREEIKCMNPNYTEF 328
Y A+D+W++GC++ E+ +G+PLFPG+S +DQL I+ LG P +E+ NP +
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGV 261
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
+ P+IK + + ++ +DL + L P+ R E H FF
Sbjct: 262 RLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFF 310
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDHPNVVSLK 150
R VG G++G V A + VA+KK+ L R REL+ ++ L H NV+ L
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 151 HCFFSTT---DKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
F T D E+YL V + + + K Q + +V+ YQ+ R L Y
Sbjct: 94 DVFTPATSIEDFSEVYL--VTTLMGADLNNIVK-----CQALSDEHVQFLVYQLLRGLKY 146
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 267
IH G+ HRD+KP N+ VN + ++++ DFG A+ E Y+ +R+YRAPE++
Sbjct: 147 IHSA-GIIHRDLKPSNVAVNEDS-ELRILDFGLARQ--ADEEMTGYVATRWYRAPEIMLN 202
Query: 268 ATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTE 327
Y +DIWSVGC++AELL G+ LFPG +DQL I++V+GTP+ E + ++ +
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHAR 262
Query: 328 F---KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPN 384
P + IF + P A+DL+ R+L + R +A EA H +F + DP
Sbjct: 263 TYIQSLPPMPQKDLSSIF-RGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPE 321
Query: 385 ARLPNGRPFPPLFNFKPQELK 405
P P+ K + L+
Sbjct: 322 DE-PEAEPYDESVEAKERTLE 341
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 165/319 (51%), Gaps = 25/319 (7%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V + +++G +A+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 117
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F T +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 118 VFTPATSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 172
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 173 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 228
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG ++QL +I+++ GTP I M NY
Sbjct: 229 YNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEARNYI 288
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
PQ+ + +F P AVDL+ ++L + R TA EA HP+F + DP+
Sbjct: 289 N-SLPQMPKRNFADVF-IGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQYHDPDDE 346
Query: 387 LPNGRPFPPLFNFKPQELK 405
P P+ F + E++
Sbjct: 347 -PESEPYDQSFESRQLEIE 364
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 102/295 (34%), Positives = 159/295 (53%), Gaps = 32/295 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ GET A+KK+ +K + RE+ ++ L H N+V L
Sbjct: 10 IGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ L LV E + + + ++ + + K + Q+ +AY H
Sbjct: 69 IHTKKR-----LVLVFEHLDQDLKKLL---DVCEGGLESVTAKSFLLQLLNGIAYCHDR- 119
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N ++K+ DFG A+ G P Y I + +YRAP+++ G+
Sbjct: 120 RVLHRDLKPQNLLIN-REGELKIADFGLARAF--GIPVRKYTHEIVTLWYRAPDVLMGSK 176
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF- 328
+Y+T IDIWSVGC+ AE++ G PLFPG S DQL+ I ++LGTP + PN TE
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNW----PNVTELP 232
Query: 329 ----KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYE 379
F + PW F K + +DL+S++L+ PN R TA +A H +F E
Sbjct: 233 KYDPNFTVYEPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 170/309 (55%), Gaps = 25/309 (8%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----RELQTMRLLDHPNV 146
+Y+ +G+G++ V++ K T VA+K++ + RE+ ++ L H N+
Sbjct: 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI 62
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALA 206
V+L H T E L LV E++ + + ++ + + VKL+ +Q+ R LA
Sbjct: 63 VTL-HDIIHT----EKSLTLVFEYLDKDL---KQYLDDCGNIINMHNVKLFLFQLLRGLA 114
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPE 263
Y H V HRD+KPQNLL+N ++KL DFG A+ K P +Y + + +YR P+
Sbjct: 115 YCHRQ-KVLHRDLKPQNLLINERG-ELKLADFGLARA--KSIPTKTYDNEVVTLWYRPPD 170
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM-- 321
++ G+T+Y+T ID+W VGC+ E+ G+PLFPG + +QL I ++LGTPT E +
Sbjct: 171 ILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILS 230
Query: 322 NPNYTEFKFPQIKAHPWHKIFHK-RMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYEL 380
N + + +P+ +A + H R+ + DL+++LLQ+ R +A +A HPFF L
Sbjct: 231 NEEFKTYNYPKYRAEAL--LSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSL 288
Query: 381 RDPNARLPN 389
+ +LP+
Sbjct: 289 GERIHKLPD 297
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 160 bits (406), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 159/295 (53%), Gaps = 32/295 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ GET A+KK+ +K + RE+ ++ L H N+V L
Sbjct: 10 IGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ L LV E + + + ++ + + K + Q+ +AY H
Sbjct: 69 IHTKKR-----LVLVFEHLDQDLKKLL---DVCEGGLESVTAKSFLLQLLNGIAYCHDR- 119
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N ++K+ DFG A+ G P Y + + +YRAP+++ G+
Sbjct: 120 RVLHRDLKPQNLLIN-REGELKIADFGLARAF--GIPVRKYTHEVVTLWYRAPDVLMGSK 176
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF- 328
+Y+T IDIWSVGC+ AE++ G PLFPG S DQL+ I ++LGTP + PN TE
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNW----PNVTELP 232
Query: 329 ----KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYE 379
F + PW F K + +DL+S++L+ PN R TA +A H +F E
Sbjct: 233 KYDPNFTVYEPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 160 bits (406), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 161/321 (50%), Gaps = 25/321 (7%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDHPNVVSLK 150
R VG G++G V A + VA+KK+ L R REL+ ++ L H NV+ L
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 151 HCFFSTT---DKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
F T D E+YL V + + + K Q + +V+ YQ+ R L Y
Sbjct: 86 DVFTPATSIEDFSEVYL--VTTLMGADLNNIVK-----CQALSDEHVQFLVYQLLRGLKY 138
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 267
IH G+ HRD+KP N+ VN ++++ DFG A+ E Y+ +R+YRAPE++
Sbjct: 139 IHSA-GIIHRDLKPSNVAVNEDC-ELRILDFGLARQ--ADEEMTGYVATRWYRAPEIMLN 194
Query: 268 ATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTE 327
Y +DIWSVGC++AELL G+ LFPG +DQL I++V+GTP+ E + ++ +
Sbjct: 195 WMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHAR 254
Query: 328 F---KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPN 384
P + IF + P A+DL+ R+L + R +A EA H +F + DP
Sbjct: 255 TYIQSLPPMPQKDLSSIF-RGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPE 313
Query: 385 ARLPNGRPFPPLFNFKPQELK 405
P P+ K + L+
Sbjct: 314 DE-PEAEPYDESVEAKERTLE 333
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 160 bits (406), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 159/295 (53%), Gaps = 32/295 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G+V++A+ GET A+KK+ +K + RE+ ++ L H N+V L
Sbjct: 10 IGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ L LV E + + + ++ + + K + Q+ +AY H
Sbjct: 69 IHTKKR-----LVLVFEHLDQDLKKLL---DVCEGGLESVTAKSFLLQLLNGIAYCHDR- 119
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N ++K+ DFG A+ G P Y + + +YRAP+++ G+
Sbjct: 120 RVLHRDLKPQNLLIN-REGELKIADFGLARAF--GIPVRKYTHEVVTLWYRAPDVLMGSK 176
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF- 328
+Y+T IDIWSVGC+ AE++ G PLFPG S DQL+ I ++LGTP + PN TE
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNW----PNVTELP 232
Query: 329 ----KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYE 379
F + PW F K + +DL+S++L+ PN R TA +A H +F E
Sbjct: 233 KYDPNFTVYEPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 161/321 (50%), Gaps = 31/321 (9%)
Query: 82 GRNGQPKQTISYMAERV---------VGQGSFGIVFQAKCLETGETVAIKKV---LQDKR 129
R+G +Q ++ A V VG G++G V A TG VAIKK+ Q +
Sbjct: 7 ARSGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSEL 66
Query: 130 YKNRELQTMRLLDH---PNVVSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRA 185
+ R + +RLL H NV+ L F D+ LV+ F+ + ++ KH
Sbjct: 67 FAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLG 126
Query: 186 SQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV 245
R ++ YQ+ + L YIH G+ HRD+KP NL VN ++K+ DFG A+
Sbjct: 127 EDR-----IQFLVYQMLKGLRYIHAA-GIIHRDLKPGNLAVNEDC-ELKILDFGLARQ-- 177
Query: 246 KGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVE 305
+ +R+YRAPE+I YT +DIWSVGC++AE++ G+ LF G +DQL E
Sbjct: 178 ADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKE 237
Query: 306 IIKVLGTPTREEIKCMNP----NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYS 361
I+KV GTP E ++ + NY + P+++ + I P AV+L+ ++L
Sbjct: 238 IMKVTGTPPAEFVQRLQSDEAKNYMK-GLPELEKKDFASIL-TNASPLAVNLLEKMLVLD 295
Query: 362 PNLRCTALEACIHPFFYELRD 382
R TA EA HP+F L D
Sbjct: 296 AEQRVTAGEALAHPYFESLHD 316
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 162/311 (52%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ A
Sbjct: 144 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNAMH 199
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 318 -PVADPYDQSF 327
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 162/311 (52%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN + ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 146 A-DIIHRDLKPSNLAVNEDS-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 201
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 202 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 261
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 262 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 319
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 320 -PVADPYDQSF 329
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 162/311 (52%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN + ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 150 A-DIIHRDLKPSNLAVNEDS-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 205
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 206 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 265
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 266 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 323
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 324 -PVADPYDQSF 333
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----XQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 144 A-DIIHRDLKPSNLAVN-EDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 318 -PVADPYDQSF 327
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 150 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 205
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 206 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 265
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 266 Q-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 323
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 324 -PVADPYDQSF 333
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 144 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
Query: 387 LPNGRPFPPLF 397
P PF F
Sbjct: 318 -PVADPFDQSF 327
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 108
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 163
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 164 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 219
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 220 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 279
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 280 Q-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 337
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 338 -PVADPYDQSF 347
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 144 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 260 Q-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 318 -PVADPYDQSF 327
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 107
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 162
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 163 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 218
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 219 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 278
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 279 Q-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 336
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 337 -PVADPYDQSF 346
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 98
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 99 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 153
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 154 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 209
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 210 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 269
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 270 Q-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 327
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 328 -PVADPYDQSF 337
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 157 bits (397), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 161/307 (52%), Gaps = 25/307 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K SQ++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----SQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN + ++K+ DFG + + Y+ +R+YRAPE++
Sbjct: 144 A-DIIHRDLKPSNLAVNEDS-ELKILDFGLCRH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
Query: 387 LPNGRPF 393
P P+
Sbjct: 318 -PVADPY 323
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 99
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 154
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 155 A-DIIHRDLKPSNLAVN-EDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 210
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 211 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 270
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 271 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 328
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 329 -PVADPYDQSF 338
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 84
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 139
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 140 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 195
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 255
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 256 Q-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 313
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 314 -PVADPYDQSF 323
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----XQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 144 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 318 -PVADPYDQSF 327
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 151 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TADEMTGYVATRWYRAPEIMLNWMH 206
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 207 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 266
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 267 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 324
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 325 -PVADPYDQSF 334
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 149 A-DIIHRDLKPSNLAVN-EDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 204
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 264
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 265 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 322
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 323 -PVADPYDQSF 332
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 150 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 205
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 206 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 265
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 266 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 323
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 324 -PVADPYDQSF 333
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 150 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 205
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 206 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 265
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 266 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 323
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 324 -PVADPYDQSF 333
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 100
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 156 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 211
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 212 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 271
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 272 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 329
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 330 -PVADPYDQSF 339
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 100
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 156 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 211
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 212 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 271
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 272 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 329
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 330 -PVADPYDQSF 339
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 100
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 156 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 211
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 212 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 271
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 272 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 329
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 330 -PVADPYDQSF 339
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 99
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 154
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 155 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 210
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 211 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 270
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 271 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 328
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 329 -PVADPYDQSF 338
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 111
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 166
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 167 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 222
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 223 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 282
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 283 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 340
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 341 -PVADPYDQSF 350
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 111
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 166
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 167 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMXGYVATRWYRAPEIMLNWMH 222
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 223 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 282
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 283 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 340
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 341 -PVADPYDQSF 350
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 107
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 162
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 163 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 218
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 219 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 278
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 279 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 336
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 337 -PVADPYDQSF 346
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 151 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 206
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 207 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 266
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 267 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 324
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 325 -PVADPYDQSF 334
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
+G G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 149 A-DIIHRDLKPSNLAVN-EDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 204
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 264
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 265 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 322
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 323 -PVADPYDQSF 332
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 108
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 163
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 164 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 219
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 220 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 279
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 280 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 337
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 338 -PVADPYDQSF 347
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 146 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 201
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 202 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 261
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 262 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 319
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 320 -PVADPYDQSF 329
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 144 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 318 -PVADPYDQSF 327
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 144 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 318 -PVADPYDQSF 327
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/301 (35%), Positives = 159/301 (52%), Gaps = 34/301 (11%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G VF+AK ET E VA+K+V D + RE+ ++ L H N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
S DK L LV EF + + K++ + + VK + +Q+ + L + H
Sbjct: 70 LHS--DKK---LTLVFEFCDQDL---KKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR- 120
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N ++KL +FG A+ G P Y + + +YR P+++FGA
Sbjct: 121 NVLHRDLKPQNLLIN-RNGELKLANFGLARAF--GIPVRCYSAEVVTLWYRPPDVLFGAK 177
Query: 270 EYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
Y+T+ID+WS GC+ AEL G+PLFPG DQL I ++LGTPT E+ M
Sbjct: 178 LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT------ 231
Query: 329 KFPQIKAHPWHKIFHK------RMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRD 382
K P K +P + ++ DL+ LL+ +P R +A EA HP+F +
Sbjct: 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCP 291
Query: 383 P 383
P
Sbjct: 292 P 292
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 149 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 204
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 264
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 265 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 322
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 323 -PVADPYDQSF 332
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 146 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 201
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 202 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 261
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 262 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 319
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 320 -PVADPYDQSF 329
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 149 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 204
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 264
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 265 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 322
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 323 -PVADPYDQSF 332
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 87
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 88 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 142
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 143 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 198
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 199 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 258
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 259 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 316
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 317 -PVADPYDQSF 326
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 85
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 140
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 141 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 196
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 197 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 256
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 257 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 314
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 315 -PVADPYDQSF 324
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/301 (35%), Positives = 158/301 (52%), Gaps = 34/301 (11%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G VF+AK ET E VA+K+V D + RE+ ++ L H N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
S DK L LV EF + + K++ + + VK + +Q+ + L + H
Sbjct: 70 LHS--DKK---LTLVFEFCDQDL---KKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR- 120
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 269
V HRD+KPQNLL+N ++KL DFG A+ G P Y + + +YR P+++FGA
Sbjct: 121 NVLHRDLKPQNLLIN-RNGELKLADFGLARAF--GIPVRCYSAEVVTLWYRPPDVLFGAK 177
Query: 270 EYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
Y+T+ID+WS GC+ AEL +PLFPG DQL I ++LGTPT E+ M
Sbjct: 178 LYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT------ 231
Query: 329 KFPQIKAHPWHKIFHK------RMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRD 382
K P K +P + ++ DL+ LL+ +P R +A EA HP+F +
Sbjct: 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCP 291
Query: 383 P 383
P
Sbjct: 292 P 292
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 144 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 318 -PVADPYDQSF 327
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 160/307 (52%), Gaps = 25/307 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 151 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TADEMTGYVATRWYRAPEIMLNWMH 206
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 207 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 266
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 267 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 324
Query: 387 LPNGRPF 393
P P+
Sbjct: 325 -PVADPY 330
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 146 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 201
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 202 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 261
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 262 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 319
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 320 -PVADPYDQSF 329
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 160/307 (52%), Gaps = 25/307 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 151 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TADEMTGYVATRWYRAPEIMLNWMH 206
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 207 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 266
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 267 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 324
Query: 387 LPNGRPF 393
P P+
Sbjct: 325 -PVADPY 330
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 84
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 139
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 140 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 195
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 255
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 256 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 313
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 314 -PVADPYDQSF 323
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 85
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 140
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 141 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 196
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 197 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 256
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 257 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 314
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 315 -PVADPYDQSF 324
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 86
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 87 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 141
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 142 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 197
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 198 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 257
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 258 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 315
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 316 -PVADPYDQSF 325
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + ++ +R+YRAPE++
Sbjct: 144 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLNWMH 199
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 260 Q-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 318 -PVADPYDQSF 327
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + ++ +R+YRAPE++
Sbjct: 144 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLNWMH 199
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 318 -PVADPYDQSF 327
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 84
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 139
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + ++ +R+YRAPE++
Sbjct: 140 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLNWMH 195
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 255
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 256 Q-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 313
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 314 -PVADPYDQSF 323
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 157/298 (52%), Gaps = 24/298 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 144 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPN 384
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 157/298 (52%), Gaps = 24/298 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 144 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPN 384
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 157/298 (52%), Gaps = 24/298 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 144 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPN 384
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 161/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ D+G A+ + Y+ +R+YRAPE++
Sbjct: 144 A-DIIHRDLKPSNLAVNEDC-ELKILDYGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 318 -PVADPYDQSF 327
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 160/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 84
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K ++ +V+ YQI R L YIH
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CAKLTDDHVQFLIYQILRGLKYIHS 139
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 140 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 195
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 255
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 256 Q-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 313
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 314 -PVADPYDQSF 323
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 154 bits (389), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 160/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 108
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 163
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + + +R+YRAPE++
Sbjct: 164 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMXGXVATRWYRAPEIMLNWMH 219
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 220 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 279
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 280 Q-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 337
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 338 -PVADPYDQSF 347
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 160/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DF A+ + Y+ +R+YRAPE++
Sbjct: 144 A-DIIHRDLKPSNLAVNEDC-ELKILDFYLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 318 -PVADPYDQSF 327
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 160/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ FG A+ + Y+ +R+YRAPE++
Sbjct: 144 A-DIIHRDLKPSNLAVNEDC-ELKILGFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 318 -PVADPYDQSF 327
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 160/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ DFG A+ + + +R+YRAPE++
Sbjct: 144 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGXVATRWYRAPEIMLNWMH 199
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 318 -PVADPYDQSF 327
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 160/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ D G A+ + Y+ +R+YRAPE++
Sbjct: 144 A-DIIHRDLKPSNLAVNEDC-ELKILDAGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 318 -PVADPYDQSF 327
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 160/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ D G A+ + Y+ +R+YRAPE++
Sbjct: 144 A-DIIHRDLKPSNLAVNEDC-ELKILDGGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 318 -PVADPYDQSF 327
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 160/311 (51%), Gaps = 25/311 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 151
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 152 CFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +E + LV + + + K Q++ +V+ YQI R L YIH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP NL VN ++K+ D G A+ + Y+ +R+YRAPE++
Sbjct: 144 A-DIIHRDLKPSNLAVNEDC-ELKILDRGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 326
Y +DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNAR 386
+ Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 260 Q-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 317
Query: 387 LPNGRPFPPLF 397
P P+ F
Sbjct: 318 -PVADPYDQSF 327
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 163/300 (54%), Gaps = 32/300 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----RELQTMRLLDHPNVVSLKHCF 153
+G G++ V++ TG VA+K+V D RE+ M+ L H N+V L
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 154 FSTTDKDELYLNLVLEFVPETV--YRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGG 211
+ E L LV EF+ + Y ++ + + L VK + +Q+ + LA+ H
Sbjct: 73 HT-----ENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN 127
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGA 268
+ HRD+KPQNLL+N Q+KL DFG A+ G P ++ + + +YRAP+++ G+
Sbjct: 128 -KILHRDLKPQNLLINKRG-QLKLGDFGLARAF--GIPVNTFSSEVVTLWYRAPDVLMGS 183
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
Y+T+IDIWS GC+LAE++ G+PLFPG + +QL I ++GTP + + P+ T+
Sbjct: 184 RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPN----ESLWPSVTKL 239
Query: 329 -KF-PQIKAHPWHKIF-----HKRMPPEA--VDLVSRLLQYSPNLRCTALEACIHPFFYE 379
K+ P I+ P + H + P + +D + LLQ +P++R +A +A HP+F E
Sbjct: 240 PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE 299
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 152/293 (51%), Gaps = 19/293 (6%)
Query: 99 VGQGSFGIVFQAKCLETG-ETVAIKKVLQDKRYKNRELQTMR---------LLDHPNVVS 148
+G+G++G VF+A+ L+ G VA+K+V + L T+R +HPNVV
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 149 L-KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L C S TD+ E L LV E V + + +P +K +Q+ R L +
Sbjct: 79 LFDVCTVSRTDR-ETKLTLVFEHVDQDLTTYLDKVPEPG--VPTETIKDMMFQLLRGLDF 135
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 267
+H V HRD+KPQN+LV + Q+KL DFG A++ S + + +YRAPE++
Sbjct: 136 LHSH-RVVHRDLKPQNILVTS-SGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ 193
Query: 268 ATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTE 327
++ Y T +D+WSVGC+ AE+ +PLF G S VDQL +I+ V+G P E+ +
Sbjct: 194 SS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP-RDVALPR 251
Query: 328 FKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYEL 380
F A P K F + DL+ + L ++P R +A A HP+F +L
Sbjct: 252 QAFHSKSAQPIEK-FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 303
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 152/293 (51%), Gaps = 19/293 (6%)
Query: 99 VGQGSFGIVFQAKCLETG-ETVAIKKVLQDKRYKNRELQTMR---------LLDHPNVVS 148
+G+G++G VF+A+ L+ G VA+K+V + L T+R +HPNVV
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 149 L-KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L C S TD+ E L LV E V + + +P +K +Q+ R L +
Sbjct: 79 LFDVCTVSRTDR-ETKLTLVFEHVDQDLTTYLDKVPEPG--VPTETIKDMMFQLLRGLDF 135
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 267
+H V HRD+KPQN+LV + Q+KL DFG A++ S + + +YRAPE++
Sbjct: 136 LHSH-RVVHRDLKPQNILVTS-SGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ 193
Query: 268 ATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTE 327
++ Y T +D+WSVGC+ AE+ +PLF G S VDQL +I+ V+G P E+ +
Sbjct: 194 SS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP-RDVALPR 251
Query: 328 FKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYEL 380
F A P K F + DL+ + L ++P R +A A HP+F +L
Sbjct: 252 QAFHSKSAQPIEK-FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 303
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 162/308 (52%), Gaps = 34/308 (11%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVL----QDKRYKNRELQTMRLLDHPNVVS 148
YM + +G G G+VF A + + VAIKK++ Q ++ RE++ +R LDH N+V
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHY----SRASQRMPLI--YVKLYTYQIC 202
+ + + + + E +VY V ++ + ++ PL+ + +L+ YQ+
Sbjct: 73 VFEILGPSGSQLTDDVGSLTEL--NSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLL 130
Query: 203 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY-------IC 255
R L YIH V HRD+KP NL +N +K+ DFG A+++ +P+ S+ +
Sbjct: 131 RGLKYIHSA-NVLHRDLKPANLFINTEDLVLKIGDFGLARIM---DPHYSHKGHLSEGLV 186
Query: 256 SRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQL---VEIIKVLGT 312
+++YR+P L+ YT AID+W+ GC+ AE+L G+ LF G ++Q+ +E I V+
Sbjct: 187 TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHE 246
Query: 313 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPP---EAVDLVSRLLQYSPNLRCTAL 369
R+E+ + P Y + HK + +P EAVD + ++L +SP R TA
Sbjct: 247 EDRQELLSVIPVYIRNDMTEP-----HKPLTQLLPGISREAVDFLEQILTFSPMDRLTAE 301
Query: 370 EACIHPFF 377
EA HP+
Sbjct: 302 EALSHPYM 309
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 150/290 (51%), Gaps = 19/290 (6%)
Query: 99 VGQGSFGIVFQAKCLETG-ETVAIKKVLQDKRYKNRELQTMR---------LLDHPNVVS 148
+G+G++G VF+A+ L+ G VA+K+V + L T+R +HPNVV
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 149 L-KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L C S TD+ E L LV E V + + +P +K +Q+ R L +
Sbjct: 79 LFDVCTVSRTDR-ETKLTLVFEHVDQDLTTYLDKVPEPG--VPTETIKDMMFQLLRGLDF 135
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 267
+H V HRD+KPQN+LV + Q+KL DFG A++ S + + +YRAPE++
Sbjct: 136 LHSH-RVVHRDLKPQNILVTS-SGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ 193
Query: 268 ATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTE 327
++ Y T +D+WSVGC+ AE+ +PLF G S VDQL +I+ V+G P E+ +
Sbjct: 194 SS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP-RDVALPR 251
Query: 328 FKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
F A P K F + DL+ + L ++P R +A A HP+F
Sbjct: 252 QAFHSKSAQPIEK-FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 155/312 (49%), Gaps = 30/312 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKN---------RELQTMRL 140
Y +R + GS+G V A G VAIK+V + D R N R L+ +RL
Sbjct: 24 YTVQRFISSGSYGAVC-AGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 141 LDH---PNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YVK 195
L+H PN++ L+ F + L LV E + + +V QR+ + +++
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH-----DQRIVISPQHIQ 137
Query: 196 LYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYIC 255
+ Y I L +H GV HRD+ P N+L+ + + +CDF A+ Y+
Sbjct: 138 YFMYHILLGLHVLHEA-GVVHRDLHPGNILL-ADNNDITICDFNLAREDTADANKTHYVT 195
Query: 256 SRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 315
R+YRAPEL+ +T +D+WS GCV+AE+ + LF G + +QL +I++V+GTP
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI 255
Query: 316 EEIKCMNP----NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEA 371
E++ + +Y + A W + P A+DL++++L+++P R + +A
Sbjct: 256 EDVVMFSSPSARDYLRNSLSNVPARAWTAVV-PTADPVALDLIAKMLEFNPQRRISTEQA 314
Query: 372 CIHPFFYELRDP 383
HP+F L DP
Sbjct: 315 LRHPYFESLFDP 326
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 155/312 (49%), Gaps = 30/312 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKN---------RELQTMRL 140
Y +R + GS+G V A G VAIK+V + D R N R L+ +RL
Sbjct: 24 YTVQRFISSGSYGAVC-AGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 141 LDH---PNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YVK 195
L+H PN++ L+ F + L LV E + + +V QR+ + +++
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH-----DQRIVISPQHIQ 137
Query: 196 LYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYIC 255
+ Y I L +H GV HRD+ P N+L+ + + +CDF A+ Y+
Sbjct: 138 YFMYHILLGLHVLHEA-GVVHRDLHPGNILL-ADNNDITICDFNLAREDTADANKTHYVT 195
Query: 256 SRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 315
R+YRAPEL+ +T +D+WS GCV+AE+ + LF G + +QL +I++V+GTP
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI 255
Query: 316 EEIKCMNP----NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEA 371
E++ + +Y + A W + P A+DL++++L+++P R + +A
Sbjct: 256 EDVVMFSSPSARDYLRNSLSNVPARAWTAVV-PTADPVALDLIAKMLEFNPQRRISTEQA 314
Query: 372 CIHPFFYELRDP 383
HP+F L DP
Sbjct: 315 LRHPYFESLFDP 326
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 150/299 (50%), Gaps = 23/299 (7%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-NRELQTM-RLLDHPNVVSL 149
Y R +G+G + VF+A + E V +K + K+ K RE++ + L PN+++L
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRGGPNIITL 97
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
+ LV E V T ++ + Q + ++ Y Y+I +AL Y H
Sbjct: 98 ADIVKDPVSRTPA---LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGAT 269
+G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 149 S-MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 270 EYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKC-----MNP 323
Y ++D+WS+GC+LA ++ +P F G DQLV I KVLGT + ++P
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 324 NYTEFKFPQIKAHPWHKIFHKR----MPPEAVDLVSRLLQYSPNLRCTALEACIHPFFY 378
+ + + W + H + PEA+D + +LL+Y R TA EA HP+FY
Sbjct: 268 RFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 168/338 (49%), Gaps = 32/338 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A G VA+KK+ Q++ + R EL ++ ++H N+
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 85
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+SL + F +E + LV+E + + +V H +RM + YQ+ +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-HMELDHERMSYL-----LYQMLCGI 139
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 140 KHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTACTNFMMTPYVVTRYYRAPEVI 197
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +DIWSVGC++ EL+ G +F G +DQ ++I+ LGTP+ E + + P
Sbjct: 198 LGMG-YAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTV 256
Query: 324 -NYTEF--KFPQIK--------AHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
NY E K+P IK P K +A DL+S++L P+ R + EA
Sbjct: 257 RNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEAL 316
Query: 373 IHPFFYELRDPNARLPNGRPFPPLFNFKPQELKGASKE 410
HP+ DP P P +++ + +E + A +E
Sbjct: 317 RHPYITVWYDPAEA---EAPPPQIYDAQLEEREHAIEE 351
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 159/313 (50%), Gaps = 31/313 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M++++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+ L + F +E + +V+E + + +V + +RM + YQ+ +
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ-MELDHERMSYL-----LYQMLVGI 139
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 140 KHLHSA-GIIHRDLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +DIWSVGC++ E++ G LFPG +DQ ++I+ LGTP+ E +K + P
Sbjct: 198 LGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTV 256
Query: 324 -NYTEFKFPQIKAHPWHKIF-----------HKRMPPEAVDLVSRLLQYSPNLRCTALEA 371
Y E + P+ + + K+F +K +A DL+S++L + R + EA
Sbjct: 257 RTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 372 CIHPFFYELRDPN 384
HP+ DP+
Sbjct: 316 LQHPYINVWYDPS 328
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 29/311 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+SL + F +E + LV+E + + +V + +RM + YQ+ +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ-MELDHERMSYL-----LYQMLXGI 139
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 140 KHLHSA-GIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +DIWSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 198 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 324 -NYTE-------FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
NY E FP++ P +K +A DL+S++L P R + +A
Sbjct: 257 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 373 IHPFFYELRDP 383
HP+ DP
Sbjct: 317 QHPYINVWYDP 327
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 159/313 (50%), Gaps = 31/313 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M++++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+ L + F +E + +V+E + + +V + +RM + YQ+ +
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ-MELDHERMSYL-----LYQMLCGI 139
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 140 KHLHSA-GIIHRDLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +DIWSVGC++ E++ G LFPG +DQ ++I+ LGTP+ E +K + P
Sbjct: 198 LGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTV 256
Query: 324 -NYTEFKFPQIKAHPWHKIF-----------HKRMPPEAVDLVSRLLQYSPNLRCTALEA 371
Y E + P+ + + K+F +K +A DL+S++L + R + EA
Sbjct: 257 RTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 372 CIHPFFYELRDPN 384
HP+ DP+
Sbjct: 316 LQHPYINVWYDPS 328
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 169/339 (49%), Gaps = 34/339 (10%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A G VA+KK+ Q++ + R EL ++ ++H N+
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 83
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+SL + F +E + LV+E + + +V H +RM + YQ+ +
Sbjct: 84 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-HMELDHERMSYL-----LYQMLCGI 137
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 138 KHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTASTNFMMTPYVVTRYYRAPEVI 195
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +DIWSVGC++ EL+ G +F G +DQ ++I+ LGTP+ E + + P
Sbjct: 196 LGMG-YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTV 254
Query: 324 -NYTEFKFPQIKAHPWHKIFHKRMPP-----------EAVDLVSRLLQYSPNLRCTALEA 371
NY E + P + ++F + P +A DL+S++L P+ R + EA
Sbjct: 255 RNYVENR-PAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEA 313
Query: 372 CIHPFFYELRDPNARLPNGRPFPPLFNFKPQELKGASKE 410
HP+ DP P P +++ + +E + A +E
Sbjct: 314 LRHPYITVWYDPAEA---EAPPPQIYDAQLEEREHAIEE 349
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 155/294 (52%), Gaps = 28/294 (9%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+G+G++G V++A T ETVAIK++ + + RE+ ++ L H N++ LK
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
L+L+ E+ + K Y + + + +K + YQ+ + + H
Sbjct: 102 IHHNH-----RLHLIFEYAENDL----KKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR- 151
Query: 213 GVCHRDIKPQNLLVN----PHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELI 265
HRD+KPQNLL++ T +K+ DFG A+ G P + I + +YR PE++
Sbjct: 152 RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF--GIPIRQFTHEIITLWYRPPEIL 209
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--P 323
G+ Y+T++DIWS+ C+ AE+L+ PLFPG+S +DQL +I +VLG P + P
Sbjct: 210 LGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALP 269
Query: 324 NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
++ + FP+ + ++ + E +DL++ +L+ P R +A A HP+F
Sbjct: 270 DWKQ-SFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYF 322
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 29/311 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+SL + F +E + LV+E + + +V + +RM + YQ+ +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ-MELDHERMSYL-----LYQMLXGI 139
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 140 KHLHSA-GIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +DIWSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 198 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 324 -NYTE-------FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
NY E FP++ P +K +A DL+S++L P R + +A
Sbjct: 257 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 373 IHPFFYELRDP 383
HP+ DP
Sbjct: 317 QHPYINVWYDP 327
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 29/311 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+SL + F +E + LV+E + + +V + +RM + YQ+ +
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ-MELDHERMSYL-----LYQMLXGI 132
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 133 KHLHSA-GIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 190
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +DIWSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 191 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 249
Query: 324 -NYTE-------FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
NY E FP++ P +K +A DL+S++L P R + +A
Sbjct: 250 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 309
Query: 373 IHPFFYELRDP 383
HP+ DP
Sbjct: 310 QHPYINVWYDP 320
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 156/307 (50%), Gaps = 31/307 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNVVSLKHC 152
+G G+ GIV A VAIKK+ Q++ + R EL M++++H N++ L +
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 153 FFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGG 211
F +E + +V+E + + +V + +RM + YQ+ + ++H
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQ-MELDHERMSYL-----LYQMLVGIKHLHSA 145
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 271
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 146 -GIIHRDLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 272 TTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 328
+DIWSVG ++ E++ G LFPG +DQ ++I+ LGTP+ E +K + P Y E
Sbjct: 203 KENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 329 KFPQIKAHPWHKIF-----------HKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
+ P+ + + K+F +K +A DL+S++L + R + EA HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 378 YELRDPN 384
DP+
Sbjct: 322 NVWYDPS 328
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 154/310 (49%), Gaps = 27/310 (8%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 147
Y R +G+G + VF+A + E VA+K + K+ K + L+ +R PN++
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKILENLR--GGPNII 95
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
+L + LV E V T ++ + Q + ++ Y Y+I +AL Y
Sbjct: 96 TLADIVKDPVSRTPA---LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDY 146
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 267
H +G+ HRD+KP N+L++ +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 147 CHS-MGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 268 ATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKC-----M 321
Y ++D+WS+GC+LA ++ +P F G DQLV I KVLGT + +
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL 265
Query: 322 NPNYTEFKFPQIKAHPWHKIFHKR----MPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
+P + + + W + H + PEA+D + +LL+Y R TA EA HP+F
Sbjct: 266 DPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Query: 378 YELRDPNARL 387
Y + AR+
Sbjct: 325 YTVVKDQARM 334
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 29/311 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+SL + F +E + LV+E + + +V + +RM + YQ+ +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ-MELDHERMSYL-----LYQMLCGI 139
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 140 KHLHSA-GIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +DIWSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 198 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 324 -NYTE-------FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
NY E FP++ P +K +A DL+S++L P R + +A
Sbjct: 257 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 373 IHPFFYELRDP 383
HP+ DP
Sbjct: 317 QHPYINVWYDP 327
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 158/313 (50%), Gaps = 31/313 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+ L + F +E + +V+E + + +V + +RM + YQ+ +
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ-MELDHERMSYL-----LYQMLCGI 139
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 140 KHLHSA-GIIHRDLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +DIWSVGC++ E++ G LFPG +DQ ++I+ LGTP+ E +K + P
Sbjct: 198 LGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTV 256
Query: 324 -NYTEFKFPQIKAHPWHKIF-----------HKRMPPEAVDLVSRLLQYSPNLRCTALEA 371
Y E + P+ + + K+F +K +A DL+S++L + R + EA
Sbjct: 257 RTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 372 CIHPFFYELRDPN 384
HP+ DP+
Sbjct: 316 LQHPYINVWYDPS 328
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 158/313 (50%), Gaps = 31/313 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M++++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+ L + F +E + +V+E + + +V + +RM + YQ+ +
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ-MELDHERMSYL-----LYQMLVGI 139
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 140 KHLHSA-GIIHRDLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +DIWSVG ++ E++ G LFPG +DQ ++I+ LGTP+ E +K + P
Sbjct: 198 LGMG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTV 256
Query: 324 -NYTEFKFPQIKAHPWHKIF-----------HKRMPPEAVDLVSRLLQYSPNLRCTALEA 371
Y E + P+ + + K+F +K +A DL+S++L + R + EA
Sbjct: 257 RTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 372 CIHPFFYELRDPN 384
HP+ DP+
Sbjct: 316 LQHPYINVWYDPS 328
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 158/313 (50%), Gaps = 31/313 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+ L + F +E + +V+E + + +V + +RM + YQ+ +
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ-MELDHERMSYL-----LYQMLCGI 139
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 140 KHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +DIWSVGC++ E++ G LFPG +DQ ++I+ LGTP+ E +K + P
Sbjct: 198 LGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTV 256
Query: 324 -NYTEFKFPQIKAHPWHKIF-----------HKRMPPEAVDLVSRLLQYSPNLRCTALEA 371
Y E + P+ + + K+F +K +A DL+S++L + R + EA
Sbjct: 257 RTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 372 CIHPFFYELRDPN 384
HP+ DP+
Sbjct: 316 LQHPYINVWYDPS 328
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 29/311 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+SL + F +E + LV+E + + +V + +RM + YQ+ +
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 140
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 141 KHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 198
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +DIWSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 199 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 257
Query: 324 -NYTE-------FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
NY E FP++ P +K +A DL+S++L P R + +A
Sbjct: 258 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 317
Query: 373 IHPFFYELRDP 383
HP+ DP
Sbjct: 318 QHPYINVWYDP 328
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 29/311 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+SL + F +E + LV+E + + +V + +RM + YQ+ +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 139
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 140 KHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +DIWSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 198 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 324 -NYTE-------FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
NY E FP++ P +K +A DL+S++L P R + +A
Sbjct: 257 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 373 IHPFFYELRDP 383
HP+ DP
Sbjct: 317 QHPYINVWYDP 327
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 29/311 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+SL + F +E + LV+E + + +V + +RM + YQ+ +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 139
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 140 KHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +DIWSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 198 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 324 -NYTE-------FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
NY E FP++ P +K +A DL+S++L P R + +A
Sbjct: 257 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 373 IHPFFYELRDP 383
HP+ DP
Sbjct: 317 QHPYINVWYDP 327
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 29/311 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+SL + F +E + LV+E + + +V + +RM + YQ+ +
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 140
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 141 KHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 198
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +DIWSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 199 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 257
Query: 324 -NYTE-------FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
NY E FP++ P +K +A DL+S++L P R + +A
Sbjct: 258 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 317
Query: 373 IHPFFYELRDP 383
HP+ DP
Sbjct: 318 QHPYINVWYDP 328
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 29/311 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 84
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+SL + F +E + LV+E + + +V + +RM + YQ+ +
Sbjct: 85 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 138
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 139 KHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 196
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +DIWSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 197 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 255
Query: 324 -NYTE-------FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
NY E FP++ P +K +A DL+S++L P R + +A
Sbjct: 256 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 315
Query: 373 IHPFFYELRDP 383
HP+ DP
Sbjct: 316 QHPYINVWYDP 326
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 29/311 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+SL + F +E + LV+E + + +V + +RM + YQ+ +
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 177
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 178 KHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 235
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +DIWSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 236 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 294
Query: 324 -NYTE-------FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
NY E FP++ P +K +A DL+S++L P R + +A
Sbjct: 295 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 354
Query: 373 IHPFFYELRDP 383
HP+ DP
Sbjct: 355 QHPYINVWYDP 365
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 158/313 (50%), Gaps = 31/313 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+ L + F +E + +V+E + + +V + +RM + YQ+ +
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 139
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 140 KHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +DIWSVGC++ E++ G LFPG +DQ ++I+ LGTP+ E +K + P
Sbjct: 198 LGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTV 256
Query: 324 -NYTEFKFPQIKAHPWHKIF-----------HKRMPPEAVDLVSRLLQYSPNLRCTALEA 371
Y E + P+ + + K+F +K +A DL+S++L + R + EA
Sbjct: 257 RTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 372 CIHPFFYELRDPN 384
HP+ DP+
Sbjct: 316 LQHPYINVWYDPS 328
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 29/311 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+SL + F +E + LV+E + + +V + +RM + YQ+ +
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 132
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 133 KHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 190
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +DIWSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 191 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 249
Query: 324 -NYTE-------FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
NY E FP++ P +K +A DL+S++L P R + +A
Sbjct: 250 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 309
Query: 373 IHPFFYELRDP 383
HP+ DP
Sbjct: 310 QHPYINVWYDP 320
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 29/311 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+SL + F +E + LV+E + + +V + +RM + YQ+ +
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 133
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 134 KHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 191
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +DIWSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 192 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 250
Query: 324 -NYTE-------FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
NY E FP++ P +K +A DL+S++L P R + +A
Sbjct: 251 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 310
Query: 373 IHPFFYELRDP 383
HP+ DP
Sbjct: 311 QHPYINVWYDP 321
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 29/311 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+SL + F +E + LV+E + + +V + +RM + YQ+ +
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 177
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 178 KHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 235
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +DIWSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 236 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 294
Query: 324 -NYTE-------FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
NY E FP++ P +K +A DL+S++L P R + +A
Sbjct: 295 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 354
Query: 373 IHPFFYELRDP 383
HP+ DP
Sbjct: 355 QHPYINVWYDP 365
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 29/311 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+SL + F +E + LV+E + + +V + +RM + YQ+ +
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 133
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 134 KHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 191
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +DIWSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 192 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 250
Query: 324 -NYTE-------FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
NY E FP++ P +K +A DL+S++L P R + +A
Sbjct: 251 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 310
Query: 373 IHPFFYELRDP 383
HP+ DP
Sbjct: 311 QHPYINVWYDP 321
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 157/313 (50%), Gaps = 31/313 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+ L + F +E + +V+E + + +V + +RM + YQ+ +
Sbjct: 87 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 140
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 141 KHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 198
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +DIWSVGC++ E++ G LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 199 LGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 257
Query: 324 -NYTEFKFPQIKAHPWHKIF-----------HKRMPPEAVDLVSRLLQYSPNLRCTALEA 371
Y E + P+ + + K+F +K +A DL+S++L + R + EA
Sbjct: 258 RTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 316
Query: 372 CIHPFFYELRDPN 384
HP+ DP+
Sbjct: 317 LQHPYINVWYDPS 329
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 158/313 (50%), Gaps = 31/313 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 87
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+ L + F +E + +V+E + + +V + +RM + YQ+ +
Sbjct: 88 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 141
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ + ++ +RYYRAPE+I
Sbjct: 142 KHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVI 199
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +DIWSVGC++ E++ G LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 200 LGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 258
Query: 324 -NYTEFKFPQIKAHPWHKIF-----------HKRMPPEAVDLVSRLLQYSPNLRCTALEA 371
Y E + P+ + + K+F +K +A DL+S++L + R + EA
Sbjct: 259 RTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 317
Query: 372 CIHPFFYELRDPN 384
HP+ DP+
Sbjct: 318 LQHPYINVWYDPS 330
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 157/313 (50%), Gaps = 31/313 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+ L + F +E + +V+E + + +V + +RM + YQ+ +
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 139
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 140 KHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +DIWSVGC++ E++ G LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 198 LGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 324 -NYTEFKFPQIKAHPWHKIF-----------HKRMPPEAVDLVSRLLQYSPNLRCTALEA 371
Y E + P+ + + K+F +K +A DL+S++L + R + EA
Sbjct: 257 RTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 372 CIHPFFYELRDPN 384
HP+ DP+
Sbjct: 316 LQHPYINVWYDPS 328
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 153/305 (50%), Gaps = 29/305 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+SL + F +E + LV+E + + +V + +RM + YQ+ +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 139
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 140 KHLHSA-GIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +DIWSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 198 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 324 -NYTE-------FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
NY E FP++ P +K +A DL+S++L P R + +A
Sbjct: 257 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 373 IHPFF 377
HP+
Sbjct: 317 QHPYI 321
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 157/313 (50%), Gaps = 33/313 (10%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGE--TVAIKKVLQDKRYKNRELQTMRLLDH 143
Q + Y R VG+G + VF+ + E + I K ++ K+ K L+
Sbjct: 26 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLMGG 85
Query: 144 PNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICR 203
PN+V L D+ +L+ E+V T ++V Y + ++ Y Y++ +
Sbjct: 86 PNIVKLLDI---VRDQHSKTPSLIFEYVNNTDFKVL--YPTLTDYD----IRYYIYELLK 136
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 263
AL Y H G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PE
Sbjct: 137 ALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 195
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
L+ +Y ++D+WS+GC+ A ++ +P F G DQLV+I KVLGT +N
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT------DGLN 249
Query: 323 PNYTEFKF---PQIKA-------HPWHKIFHKR----MPPEAVDLVSRLLQYSPNLRCTA 368
+++ PQ++A PW K + + PEA+D + +LL+Y R TA
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 369 LEACIHPFFYELR 381
LEA HP+F ++R
Sbjct: 310 LEAMTHPYFQQVR 322
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 153/310 (49%), Gaps = 27/310 (8%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 147
Y R +G+G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 95
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
+L + LV E V T ++ + Q + ++ Y Y+I +AL Y
Sbjct: 96 TLADIVKDPVSRTPA---LVFEHVNNTDFKQLR------QTLTDYDIRFYMYEILKALDY 146
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 267
H +G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 147 CHS-MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 268 ATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKC-----M 321
Y ++D+WS+GC+LA ++ +P F G DQLV I KVLGT + +
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL 265
Query: 322 NPNYTEFKFPQIKAHPWHKIFHKR----MPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
+P + + + W + H + PEA+D + +LL+Y R TA EA HP+F
Sbjct: 266 DPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Query: 378 YELRDPNARL 387
Y + AR+
Sbjct: 325 YTVVKDQARM 334
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 155/313 (49%), Gaps = 33/313 (10%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGE--TVAIKKVLQDKRYKNRELQTMRLLDH 143
Q + Y R VG+G + VF+ + E + I K ++ K+ K L
Sbjct: 47 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGG 106
Query: 144 PNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICR 203
PN+V L D+ +L+ E+V T ++V + ++ Y Y++ +
Sbjct: 107 PNIVKLLDI---VRDQHSKTPSLIFEYVNNTDFKVL------YPTLTDYDIRYYIYELLK 157
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 263
AL Y H G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PE
Sbjct: 158 ALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 216
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
L+ +Y ++D+WS+GC+ A ++ +P F G DQLV+I KVLGT +N
Sbjct: 217 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT------DGLN 270
Query: 323 PNYTEFKF---PQIKA-------HPWHKIFHKR----MPPEAVDLVSRLLQYSPNLRCTA 368
+++ PQ++A PW K + + PEA+D + +LL+Y R TA
Sbjct: 271 AYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 330
Query: 369 LEACIHPFFYELR 381
LEA HP+F ++R
Sbjct: 331 LEAMTHPYFQQVR 343
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 111/204 (54%), Gaps = 12/204 (5%)
Query: 194 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 253
++ Y Y+I +AL Y H +G+ HRD+KP N++++ +++L D+G A+ G+
Sbjct: 133 IRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR 191
Query: 254 ICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGT 312
+ SRY++ PEL+ Y ++D+WS+GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 313 PTREEIKC-----MNPNYTEFKFPQIKAHPWHKIFHKR----MPPEAVDLVSRLLQYSPN 363
+ ++P + + + W + H + PEA+D + +LL+Y
Sbjct: 252 EDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQ 310
Query: 364 LRCTALEACIHPFFYELRDPNARL 387
R TA EA HP+FY + AR+
Sbjct: 311 SRLTAREAMEHPYFYTVVKDQARM 334
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 153/310 (49%), Gaps = 27/310 (8%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 147
Y R +G+G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 43 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 100
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
+L + LV E V T ++ + Q + ++ Y Y+I +AL Y
Sbjct: 101 TLADIVKDPVSRTPA---LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDY 151
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 267
H +G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 152 CHS-MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 210
Query: 268 ATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKC-----M 321
Y ++D+WS+GC+LA ++ +P F G DQLV I KVLGT + +
Sbjct: 211 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL 270
Query: 322 NPNYTEFKFPQIKAHPWHKIFHKR----MPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
+P + + + W + H + PEA+D + +LL+Y R TA EA HP+F
Sbjct: 271 DPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 329
Query: 378 YELRDPNARL 387
Y + AR+
Sbjct: 330 YTVVKDQARM 339
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 111/204 (54%), Gaps = 12/204 (5%)
Query: 194 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 253
++ Y Y+I +AL Y H +G+ HRD+KP N++++ +++L D+G A+ G+
Sbjct: 133 IRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR 191
Query: 254 ICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGT 312
+ SRY++ PEL+ Y ++D+WS+GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 313 PTREEIKC-----MNPNYTEFKFPQIKAHPWHKIFHKR----MPPEAVDLVSRLLQYSPN 363
+ ++P + + + W + H + PEA+D + +LL+Y
Sbjct: 252 EDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQ 310
Query: 364 LRCTALEACIHPFFYELRDPNARL 387
R TA EA HP+FY + AR+
Sbjct: 311 SRLTAREAMEHPYFYTVVKDQARM 334
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 111/204 (54%), Gaps = 12/204 (5%)
Query: 194 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 253
++ Y Y+I +AL Y H +G+ HRD+KP N++++ +++L D+G A+ G+
Sbjct: 133 IRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR 191
Query: 254 ICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGT 312
+ SRY++ PEL+ Y ++D+WS+GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 313 PTREEIKC-----MNPNYTEFKFPQIKAHPWHKIFHKR----MPPEAVDLVSRLLQYSPN 363
+ ++P + + + W + H + PEA+D + +LL+Y
Sbjct: 252 EDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQ 310
Query: 364 LRCTALEACIHPFFYELRDPNARL 387
R TA EA HP+FY + AR+
Sbjct: 311 SRLTAREAMEHPYFYTVVKDQARM 334
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 170/408 (41%), Gaps = 99/408 (24%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQ------DKRYKNRELQTMRLLDHPNV 146
Y ++G GS+G V +A VAIKK+L+ D + RE+ + L+H +V
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHV 114
Query: 147 VSLKHCFF--STTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRA 204
V + DELY+ VLE K R + +++K Y +
Sbjct: 115 VKVLDIVIPKDVEKFDELYV--VLEIADSDF----KKLFRTPVYLTELHIKTLLYNLLVG 168
Query: 205 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS------------ 252
+ Y+H G+ HRD+KP N LVN VK+CDFG A+ + E S
Sbjct: 169 VKYVHSA-GILHRDLKPANCLVNQDC-SVKVCDFGLARTVDYPENGNSQLPISPREDDMN 226
Query: 253 ----------------YICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLL------- 289
++ +R+YRAPELI YT AID+WS+GC+ AELL
Sbjct: 227 LVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVA 286
Query: 290 ----GQPLFPGES--------------------GVDQLVEIIKVLGTPTREEIKCMNPNY 325
PLFPG S DQL I +LGTP+ E+I+ +
Sbjct: 287 YHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKE- 345
Query: 326 TEFKFPQIKAHPWHKIFHKR-----------MPPEAVDLVSRLLQYSPNLRCTALEACIH 374
A + +IF KR +A+ L+ R+L ++PN R T E H
Sbjct: 346 --------DAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAH 397
Query: 375 PFFYELR----DPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPE 418
PFF E+R + NA PF N +L+ A + + + PE
Sbjct: 398 PFFKEVRIAEVETNATEKVRLPFNDWMNMDEPQLRYAFVKEIQRYHPE 445
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 111/204 (54%), Gaps = 12/204 (5%)
Query: 194 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 253
++ Y Y+I +AL Y H +G+ HRD+KP N++++ +++L D+G A+ G+
Sbjct: 133 IRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR 191
Query: 254 ICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGT 312
+ SRY++ PEL+ Y ++D+WS+GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 313 PTREEIKC-----MNPNYTEFKFPQIKAHPWHKIFHKR----MPPEAVDLVSRLLQYSPN 363
+ ++P + + + W + H + PEA+D + +LL+Y
Sbjct: 252 EDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQ 310
Query: 364 LRCTALEACIHPFFYELRDPNARL 387
R TA EA HP+FY + AR+
Sbjct: 311 SRLTAREAMEHPYFYTVVKDQARM 334
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 111/204 (54%), Gaps = 12/204 (5%)
Query: 194 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 253
++ Y Y+I +AL Y H +G+ HRD+KP N++++ +++L D+G A+ G+
Sbjct: 133 IRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR 191
Query: 254 ICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGT 312
+ SRY++ PEL+ Y ++D+WS+GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 313 PTREEIKC-----MNPNYTEFKFPQIKAHPWHKIFHKR----MPPEAVDLVSRLLQYSPN 363
+ ++P + + + W + H + PEA+D + +LL+Y
Sbjct: 252 EDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQ 310
Query: 364 LRCTALEACIHPFFYELRDPNARL 387
R TA EA HP+FY + AR+
Sbjct: 311 SRLTAREAMEHPYFYTVVKDQARM 334
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 111/204 (54%), Gaps = 12/204 (5%)
Query: 194 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 253
++ Y Y+I +AL Y H +G+ HRD+KP N++++ +++L D+G A+ G+
Sbjct: 132 IRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR 190
Query: 254 ICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGT 312
+ SRY++ PEL+ Y ++D+WS+GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 191 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 250
Query: 313 PTREEIKC-----MNPNYTEFKFPQIKAHPWHKIFHKR----MPPEAVDLVSRLLQYSPN 363
+ ++P + + + W + H + PEA+D + +LL+Y
Sbjct: 251 EDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQ 309
Query: 364 LRCTALEACIHPFFYELRDPNARL 387
R TA EA HP+FY + AR+
Sbjct: 310 SRLTAREAMEHPYFYTVVKDQARM 333
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 155/313 (49%), Gaps = 33/313 (10%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGE--TVAIKKVLQDKRYKNRELQTMRLLDH 143
Q + Y R VG+G + VF+ + E + I K ++ K+ K L
Sbjct: 27 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGG 86
Query: 144 PNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICR 203
PN+V L D+ +L+ E+V T ++V + ++ Y Y++ +
Sbjct: 87 PNIVKLLDI---VRDQHSKTPSLIFEYVNNTDFKVL------YPTLTDYDIRYYIYELLK 137
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 263
AL Y H G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PE
Sbjct: 138 ALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 196
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
L+ +Y ++D+WS+GC+ A ++ +P F G DQLV+I KVLGT +N
Sbjct: 197 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT------DGLN 250
Query: 323 PNYTEFKF---PQIKA-------HPWHKIFHKR----MPPEAVDLVSRLLQYSPNLRCTA 368
+++ PQ++A PW K + + PEA+D + +LL+Y R TA
Sbjct: 251 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 310
Query: 369 LEACIHPFFYELR 381
LEA HP+F ++R
Sbjct: 311 LEAMTHPYFQQVR 323
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 156/313 (49%), Gaps = 33/313 (10%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGE--TVAIKKVLQDKRYKNRELQTMRLLDH 143
Q + Y R VG+G + VF+ + E + I K ++ K+ K L
Sbjct: 26 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 144 PNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICR 203
PN+V L D+ +L+ E+V T ++V Y + ++ Y Y++ +
Sbjct: 86 PNIVKLLDI---VRDQHSKTPSLIFEYVNNTDFKVL--YPTLTDYD----IRYYIYELLK 136
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 263
AL Y H G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PE
Sbjct: 137 ALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 195
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
L+ +Y ++D+WS+GC+ A ++ +P F G DQLV+I KVLGT +N
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT------DGLN 249
Query: 323 PNYTEFKF---PQIKA-------HPWHKIFHKR----MPPEAVDLVSRLLQYSPNLRCTA 368
+++ PQ++A PW K + + PEA+D + +LL+Y R TA
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 369 LEACIHPFFYELR 381
LEA HP+F ++R
Sbjct: 310 LEAMTHPYFQQVR 322
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 155/313 (49%), Gaps = 33/313 (10%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGE--TVAIKKVLQDKRYKNRELQTMRLLDH 143
Q + Y R VG+G + VF+ + E + I K ++ K+ K L
Sbjct: 26 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 144 PNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICR 203
PN+V L D+ +L+ E+V T ++V + ++ Y Y++ +
Sbjct: 86 PNIVKLLDI---VRDQHSKTPSLIFEYVNNTDFKVL------YPTLTDYDIRYYIYELLK 136
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 263
AL Y H G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PE
Sbjct: 137 ALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 195
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
L+ +Y ++D+WS+GC+ A ++ +P F G DQLV+I KVLGT +N
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT------DGLN 249
Query: 323 PNYTEFKF---PQIKA-------HPWHKIFHKR----MPPEAVDLVSRLLQYSPNLRCTA 368
+++ PQ++A PW K + + PEA+D + +LL+Y R TA
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 369 LEACIHPFFYELR 381
LEA HP+F ++R
Sbjct: 310 LEAMTHPYFQQVR 322
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 155/313 (49%), Gaps = 33/313 (10%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGE--TVAIKKVLQDKRYKNRELQTMRLLDH 143
Q + Y R VG+G + VF+ + E + I K ++ K+ K L
Sbjct: 26 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 144 PNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICR 203
PN+V L D+ +L+ E+V T ++V + ++ Y Y++ +
Sbjct: 86 PNIVKLLDI---VRDQHSKTPSLIFEYVNNTDFKVL------YPTLTDYDIRYYIYELLK 136
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 263
AL Y H G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PE
Sbjct: 137 ALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 195
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
L+ +Y ++D+WS+GC+ A ++ +P F G DQLV+I KVLGT +N
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT------DGLN 249
Query: 323 PNYTEFKF---PQIKA-------HPWHKIFHKR----MPPEAVDLVSRLLQYSPNLRCTA 368
+++ PQ++A PW K + + PEA+D + +LL+Y R TA
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 369 LEACIHPFFYELR 381
LEA HP+F ++R
Sbjct: 310 LEAMTHPYFQQVR 322
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 154/313 (49%), Gaps = 33/313 (10%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT--MRLLDH 143
Q + Y R VG+G + VF+ + E IK + K+ K + L
Sbjct: 28 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGG 87
Query: 144 PNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICR 203
PN+V L D+ +L+ E+V T ++V + ++ Y Y++ +
Sbjct: 88 PNIVKLLDI---VRDQHSKTPSLIFEYVNNTDFKVL------YPTLTDYDIRYYIYELLK 138
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 263
AL Y H G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PE
Sbjct: 139 ALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 197
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
L+ +Y ++D+WS+GC+ A ++ +P F G DQLV+I KVLGT +N
Sbjct: 198 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LN 251
Query: 323 PNYTEFKF---PQIKA-------HPWHKIFHKR----MPPEAVDLVSRLLQYSPNLRCTA 368
+++ PQ++A PW K + + PEA+D + +LL+Y R TA
Sbjct: 252 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 311
Query: 369 LEACIHPFFYELR 381
LEA HP+F ++R
Sbjct: 312 LEAMTHPYFQQVR 324
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 110/203 (54%), Gaps = 12/203 (5%)
Query: 194 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 253
++ Y Y+I +AL Y H +G+ HRD+KP N++++ +++L D+G A+ G+
Sbjct: 133 IRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR 191
Query: 254 ICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGT 312
+ SRY++ PEL+ Y ++D+WS+GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 313 PTREEIKC-----MNPNYTEFKFPQIKAHPWHKIFHKR----MPPEAVDLVSRLLQYSPN 363
+ ++P + + + W + H + PEA+D + +LL+Y
Sbjct: 252 EDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQ 310
Query: 364 LRCTALEACIHPFFYELRDPNAR 386
R TA EA HP+FY + AR
Sbjct: 311 SRLTAREAMEHPYFYTVVKDQAR 333
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 154/313 (49%), Gaps = 33/313 (10%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT--MRLLDH 143
Q + Y R VG+G + VF+ + E IK + K+ K + L
Sbjct: 27 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGG 86
Query: 144 PNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICR 203
PN+V L D+ +L+ E+V T ++V + ++ Y Y++ +
Sbjct: 87 PNIVKLLDI---VRDQHSKTPSLIFEYVNNTDFKVL------YPTLTDYDIRYYIYELLK 137
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 263
AL Y H G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PE
Sbjct: 138 ALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 196
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
L+ +Y ++D+WS+GC+ A ++ +P F G DQLV+I KVLGT +N
Sbjct: 197 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LN 250
Query: 323 PNYTEFKF---PQIKA-------HPWHKIFHKR----MPPEAVDLVSRLLQYSPNLRCTA 368
+++ PQ++A PW K + + PEA+D + +LL+Y R TA
Sbjct: 251 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 310
Query: 369 LEACIHPFFYELR 381
LEA HP+F ++R
Sbjct: 311 LEAMTHPYFQQVR 323
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 154/313 (49%), Gaps = 33/313 (10%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT--MRLLDH 143
Q + Y R VG+G + VF+ + E IK + K+ K + L
Sbjct: 26 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGG 85
Query: 144 PNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICR 203
PN+V L D+ +L+ E+V T ++V + ++ Y Y++ +
Sbjct: 86 PNIVKLLDI---VRDQHSKTPSLIFEYVNNTDFKVL------YPTLTDYDIRYYIYELLK 136
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 263
AL Y H G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PE
Sbjct: 137 ALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 195
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
L+ +Y ++D+WS+GC+ A ++ +P F G DQLV+I KVLGT +N
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LN 249
Query: 323 PNYTEFKF---PQIKA-------HPWHKIFHKR----MPPEAVDLVSRLLQYSPNLRCTA 368
+++ PQ++A PW K + + PEA+D + +LL+Y R TA
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 369 LEACIHPFFYELR 381
LEA HP+F ++R
Sbjct: 310 LEAMTHPYFQQVR 322
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 155/313 (49%), Gaps = 33/313 (10%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT--MRLLDH 143
Q + Y R VG+G + VF+ + E IK + K+ K + L
Sbjct: 26 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGG 85
Query: 144 PNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICR 203
PN+V L D+ +L+ E+V T ++V Y + ++ Y Y++ +
Sbjct: 86 PNIVKLLDI---VRDQHSKTPSLIFEYVNNTDFKVL--YPTLTDYD----IRYYIYELLK 136
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 263
AL Y H G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PE
Sbjct: 137 ALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 195
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
L+ +Y ++D+WS+GC+ A ++ +P F G DQLV+I KVLGT +N
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LN 249
Query: 323 PNYTEFKF---PQIKA-------HPWHKIFHKR----MPPEAVDLVSRLLQYSPNLRCTA 368
+++ PQ++A PW K + + PEA+D + +LL+Y R TA
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 369 LEACIHPFFYELR 381
LEA HP+F ++R
Sbjct: 310 LEAMTHPYFQQVR 322
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 120/226 (53%), Gaps = 24/226 (10%)
Query: 166 LVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLL 225
LV E++ T ++ + Q + ++ Y Y++ +AL Y H G+ HRD+KP N++
Sbjct: 112 LVFEYINNTDFK------QLYQILTDFDIRFYMYELLKALDYCHSK-GIMHRDVKPHNVM 164
Query: 226 VNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLA 285
++ +++L D+G A+ + + SRY++ PEL+ Y ++D+WS+GC+LA
Sbjct: 165 IDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 224
Query: 286 ELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKC--------MNPNYTEFKFPQIKAH 336
++ +P F G+ DQLV I KVLGT EE+ ++P++ + Q
Sbjct: 225 SMIFRREPFFHGQDNYDQLVRIAKVLGT---EELYGYLKKYHIDLDPHFNDI-LGQHSRK 280
Query: 337 PWHKIFHKR----MPPEAVDLVSRLLQYSPNLRCTALEACIHPFFY 378
W H + PEA+DL+ +LL+Y R TA EA HP+FY
Sbjct: 281 RWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFY 326
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 120/226 (53%), Gaps = 24/226 (10%)
Query: 166 LVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLL 225
LV E++ T ++ + Q + ++ Y Y++ +AL Y H G+ HRD+KP N++
Sbjct: 117 LVFEYINNTDFK------QLYQILTDFDIRFYMYELLKALDYCHSK-GIMHRDVKPHNVM 169
Query: 226 VNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLA 285
++ +++L D+G A+ + + SRY++ PEL+ Y ++D+WS+GC+LA
Sbjct: 170 IDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 229
Query: 286 ELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKC--------MNPNYTEFKFPQIKAH 336
++ +P F G+ DQLV I KVLGT EE+ ++P++ + Q
Sbjct: 230 SMIFRREPFFHGQDNYDQLVRIAKVLGT---EELYGYLKKYHIDLDPHFNDI-LGQHSRK 285
Query: 337 PWHKIFHKR----MPPEAVDLVSRLLQYSPNLRCTALEACIHPFFY 378
W H + PEA+DL+ +LL+Y R TA EA HP+FY
Sbjct: 286 RWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFY 331
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 107/195 (54%), Gaps = 12/195 (6%)
Query: 194 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 253
++ Y Y+I +AL Y H +G+ HRD+KP N++++ +++L D+G A+ G+
Sbjct: 132 IRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR 190
Query: 254 ICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGT 312
+ SRY++ PEL+ Y ++D+WS+GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 191 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 250
Query: 313 PTREEIKC-----MNPNYTEFKFPQIKAHPWHKIFHKR----MPPEAVDLVSRLLQYSPN 363
+ ++P + + + W + H + PEA+D + +LL+Y
Sbjct: 251 EDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQ 309
Query: 364 LRCTALEACIHPFFY 378
R TA EA HP+FY
Sbjct: 310 SRLTAREAMEHPYFY 324
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 157/313 (50%), Gaps = 31/313 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+ L + F +E + +V+E + + +V + +RM + YQ+ +
Sbjct: 80 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 133
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 134 KHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 191
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +D+WSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 192 LGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 250
Query: 324 -NYTEFKFPQIKAHPWHKIF-----------HKRMPPEAVDLVSRLLQYSPNLRCTALEA 371
Y E + P+ + + K+F +K +A DL+S++L + R + EA
Sbjct: 251 RTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 309
Query: 372 CIHPFFYELRDPN 384
HP+ DP+
Sbjct: 310 LQHPYINVWYDPS 322
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 107/195 (54%), Gaps = 12/195 (6%)
Query: 194 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 253
++ Y Y+I +AL Y H +G+ HRD+KP N++++ +++L D+G A+ G+
Sbjct: 133 IRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR 191
Query: 254 ICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGT 312
+ SRY++ PEL+ Y ++D+WS+GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 313 PTREEIKC-----MNPNYTEFKFPQIKAHPWHKIFHKR----MPPEAVDLVSRLLQYSPN 363
+ ++P + + + W + H + PEA+D + +LL+Y
Sbjct: 252 EDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQ 310
Query: 364 LRCTALEACIHPFFY 378
R TA EA HP+FY
Sbjct: 311 SRLTAREAMEHPYFY 325
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 157/313 (50%), Gaps = 31/313 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 90
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+ L + F +E + +V+E + + +V + +RM + YQ+ +
Sbjct: 91 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 144
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 145 KHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 202
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +D+WSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 203 LGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 261
Query: 324 -NYTEFKFPQIKAHPWHKIF-----------HKRMPPEAVDLVSRLLQYSPNLRCTALEA 371
Y E + P+ + + K+F +K +A DL+S++L + R + EA
Sbjct: 262 RTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 320
Query: 372 CIHPFFYELRDPN 384
HP+ DP+
Sbjct: 321 LQHPYINVWYDPS 333
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 156/313 (49%), Gaps = 31/313 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+ L + F +E + +V+E + + +V + +RM + YQ+ +
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 139
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ + +RYYRAPE+I
Sbjct: 140 KHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVI 197
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +DIWSVGC++ E++ G LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 198 LGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 324 -NYTEFKFPQIKAHPWHKIFHKRMPP-----------EAVDLVSRLLQYSPNLRCTALEA 371
Y E + P+ + + K+F + P +A DL+S++L + R + EA
Sbjct: 257 RTYVENR-PKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEA 315
Query: 372 CIHPFFYELRDPN 384
HP+ DP+
Sbjct: 316 LQHPYINVWYDPS 328
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 107/195 (54%), Gaps = 12/195 (6%)
Query: 194 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 253
++ Y Y+I +AL Y H +G+ HRD+KP N++++ +++L D+G A+ G+
Sbjct: 131 IRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR 189
Query: 254 ICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGT 312
+ SRY++ PEL+ Y ++D+WS+GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 190 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 249
Query: 313 PTREEIKC-----MNPNYTEFKFPQIKAHPWHKIFHKR----MPPEAVDLVSRLLQYSPN 363
+ ++P + + + W + H + PEA+D + +LL+Y
Sbjct: 250 EDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQ 308
Query: 364 LRCTALEACIHPFFY 378
R TA EA HP+FY
Sbjct: 309 SRLTAREAMEHPYFY 323
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 151/302 (50%), Gaps = 29/302 (9%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 147
Y R +G+G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 95
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
+L + LV E V T ++ + Q + ++ Y Y+I +AL Y
Sbjct: 96 TLADIVKDPVSRTPA---LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDY 146
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 267
H +G+ HRD+KP N++++ +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 147 CHS-MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 268 ATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKC 320
Y ++D+WS+GC+LA ++ +P F G DQLV I KVLGT + I+
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 264
Query: 321 MNPNYTEFKFPQIKAHPWHKIFHKR----MPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
++P + + + W + H + PEA+D + +LL+Y R TA EA HP+
Sbjct: 265 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
Query: 377 FY 378
FY
Sbjct: 324 FY 325
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 165/333 (49%), Gaps = 53/333 (15%)
Query: 87 PKQTISYMAE--RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDH- 143
P ++Y E +V+G+GSFG V +A + + VA+K V +KR+ + + +R+L+H
Sbjct: 91 PHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHL 150
Query: 144 -----PNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYT 198
N +++ H + T ++ ++ + E + +Y + K +PL V+ +
Sbjct: 151 RKQDKDNTMNVIHMLENFTFRN--HICMTFELLSMNLYELIKKNKFQGFSLPL--VRKFA 206
Query: 199 YQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ-VKLCDFGSAKVLVKGEPNISYICSR 257
+ I + L +H + H D+KP+N+L+ +K+ DFGS+ + + + I SR
Sbjct: 207 HSILQCLDALHKN-RIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYTXIQSR 263
Query: 258 YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 317
+YRAPE+I GA Y ID+WS+GC+LAELL G PL PGE DQL +I++LG P++
Sbjct: 264 FYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ-- 320
Query: 318 IKCMNPNYTEFKFPQIKAHPWH------------------KIFHKRMPPEA--------- 350
K ++ + F K +P + + R PPE+
Sbjct: 321 -KLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKG 379
Query: 351 ------VDLVSRLLQYSPNLRCTALEACIHPFF 377
+D + + L++ P +R T +A HP+
Sbjct: 380 CDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 165/333 (49%), Gaps = 53/333 (15%)
Query: 87 PKQTISYMAE--RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDH- 143
P ++Y E +V+G+GSFG V +A + + VA+K V +KR+ + + +R+L+H
Sbjct: 91 PHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHL 150
Query: 144 -----PNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYT 198
N +++ H + T ++ ++ + E + +Y + K +PL V+ +
Sbjct: 151 RKQDKDNTMNVIHMLENFTFRN--HICMTFELLSMNLYELIKKNKFQGFSLPL--VRKFA 206
Query: 199 YQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ-VKLCDFGSAKVLVKGEPNISYICSR 257
+ I + L +H + H D+KP+N+L+ +K+ DFGS+ + + + I SR
Sbjct: 207 HSILQCLDALHKN-RIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYTXIQSR 263
Query: 258 YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 317
+YRAPE+I GA Y ID+WS+GC+LAELL G PL PGE DQL +I++LG P++
Sbjct: 264 FYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ-- 320
Query: 318 IKCMNPNYTEFKFPQIKAHPWH------------------KIFHKRMPPEA--------- 350
K ++ + F K +P + + R PPE+
Sbjct: 321 -KLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKG 379
Query: 351 ------VDLVSRLLQYSPNLRCTALEACIHPFF 377
+D + + L++ P +R T +A HP+
Sbjct: 380 CDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 167/355 (47%), Gaps = 77/355 (21%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDHPN 145
+Y+ + ++G+GS+G V+ A T + VAIKKV L D + RE+ + L
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 86
Query: 146 VVSLKHCFF--STTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICR 203
++ L DELY+ VLE + ++ K ++ ++K Y +
Sbjct: 87 IIRLYDLIIPDDLLKFDELYI--VLEIADSDLKKLFKTPIFLTEE----HIKTILYNLLL 140
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL-VKGEPNI----------- 251
+IH G+ HRD+KP N L+N VK+CDFG A+ + + + NI
Sbjct: 141 GENFIHES-GIIHRDLKPANCLLNQDC-SVKVCDFGLARTINSEKDTNIVNDLEENEEPG 198
Query: 252 -----------SYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQ-------- 291
S++ +R+YRAPELI YT +IDIWS GC+ AELL + Q
Sbjct: 199 PHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTN 258
Query: 292 --PLFPG-----------------ESGVDQLVEIIKVLGTPTREEIKCMN-PNYTEFKFP 331
PLFPG +S DQL I ++GTPT +++K +N P ++
Sbjct: 259 RFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKY--- 315
Query: 332 QIKAHPWHKIFHKR-----MPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELR 381
IK P K + + + + ++L+ +L+++PN R T +A HP+ ++R
Sbjct: 316 -IKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVR 369
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 156/313 (49%), Gaps = 31/313 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+ L + F +E + +V+E + + +V + +RM + YQ+ +
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 139
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ + +RYYRAPE+I
Sbjct: 140 KHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVI 197
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +DIWSVGC++ E++ + LFPG +DQ ++I+ LGTP +K + P
Sbjct: 198 LGMG-YKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTV 256
Query: 324 -NYTEFKFPQIKAHPWHKIF-----------HKRMPPEAVDLVSRLLQYSPNLRCTALEA 371
NY E + P+ + + K+F +K +A DL+S++L + R + EA
Sbjct: 257 RNYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 372 CIHPFFYELRDPN 384
HP+ DP+
Sbjct: 316 LQHPYINVWYDPS 328
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 144/285 (50%), Gaps = 44/285 (15%)
Query: 133 RELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ----- 187
RE+ +R L HPNV+SL+ F S D+ + L+ ++ ++ + K + RAS+
Sbjct: 67 REIALLRELKHPNVISLQKVFLSHADRK---VWLLFDYAEHDLWHIIK-FHRASKANKKP 122
Query: 188 -RMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKV 243
++P VK YQI + Y+H V HRD+KP N+LV P +VK+ D G A++
Sbjct: 123 VQLPRGMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGPERGRVKIADMGFARL 181
Query: 244 L---VKGEPNIS-YICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF----- 294
+K ++ + + +YRAPEL+ GA YT AIDIW++GC+ AELL +P+F
Sbjct: 182 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 241
Query: 295 ----PGESGVDQLVEIIKVLGTPTR---EEIKCMNPNYTEFK-FPQ--------IKAHPW 338
DQL I V+G P E+IK M + T K F + IK
Sbjct: 242 DIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEK 301
Query: 339 HKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP 383
HK+ + +A L+ +LL P R T+ +A P+F L DP
Sbjct: 302 HKV---KPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF--LEDP 341
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 148/296 (50%), Gaps = 28/296 (9%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN----------RELQTMRLLD---HPN 145
+G G++G V++A+ +G VA+K V R N RE+ +R L+ HPN
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 146 VVSLKH-CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICR 203
VV L C S TD+ E+ + LV E V + + + +A +P +K Q R
Sbjct: 68 VVRLMDVCATSRTDR-EIKVTLVFEHVDQDL---RTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 263
L ++H + HRD+KP+N+LV VKL DFG A++ + + +YRAPE
Sbjct: 124 GLDFLHANC-IVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPE 181
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 323
++ +T Y T +D+WSVGC+ AE+ +PLF G S DQL +I ++G P ++ +
Sbjct: 182 VLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP-RDV 239
Query: 324 NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYE 379
+ FP P + + M L+ +L ++P+ R +A A H + ++
Sbjct: 240 SLPRGAFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 162/333 (48%), Gaps = 53/333 (15%)
Query: 87 PKQTISYMAE--RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDH- 143
P ++Y E +V+G+G FG V +A + + VA+K V +KR+ + + +R+L+H
Sbjct: 91 PHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHL 150
Query: 144 -----PNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYT 198
N +++ H + T ++ ++ + E + +Y + K +PL V+ +
Sbjct: 151 RKQDKDNTMNVIHMLENFTFRN--HICMTFELLSMNLYELIKKNKFQGFSLPL--VRKFA 206
Query: 199 YQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ-VKLCDFGSAKVLVKGEPNISYICSR 257
+ I + L +H + H D+KP+N+L+ +K+ DFGS+ + + I SR
Sbjct: 207 HSILQCLDALHKN-RIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYXXIQSR 263
Query: 258 YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 317
+YRAPE+I GA Y ID+WS+GC+LAELL G PL PGE DQL +I++LG P +
Sbjct: 264 FYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQ-- 320
Query: 318 IKCMNPNYTEFKFPQIKAHPWH------------------KIFHKRMPPEA--------- 350
K ++ + F K +P + + R PPE+
Sbjct: 321 -KLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKG 379
Query: 351 ------VDLVSRLLQYSPNLRCTALEACIHPFF 377
+D + + L++ P +R T +A HP+
Sbjct: 380 CDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 148/296 (50%), Gaps = 28/296 (9%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN----------RELQTMRLLD---HPN 145
+G G++G V++A+ +G VA+K V R N RE+ +R L+ HPN
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 146 VVSLKH-CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICR 203
VV L C S TD+ E+ + LV E V + + + +A +P +K Q R
Sbjct: 68 VVRLMDVCATSRTDR-EIKVTLVFEHVDQDL---RTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 263
L ++H + HRD+KP+N+LV VKL DFG A++ + + +YRAPE
Sbjct: 124 GLDFLHANC-IVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPE 181
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 323
++ +T Y T +D+WSVGC+ AE+ +PLF G S DQL +I ++G P ++ +
Sbjct: 182 VLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP-RDV 239
Query: 324 NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYE 379
+ FP P + + M L+ +L ++P+ R +A A H + ++
Sbjct: 240 SLPRGAFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 156/313 (49%), Gaps = 31/313 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 147 VSLKHCFFSTTDKDELY-LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+ L + F +E + +V+E + + +V + +RM + YQ+ +
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHERMSYL-----LYQMLCGI 139
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
++H G+ HRD+KP N++V +K+ DFG A+ + +RYYRAPE+I
Sbjct: 140 KHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVI 197
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 323
G Y +D+WSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 198 LGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 324 -NYTEFKFPQIKAHPWHKIF-----------HKRMPPEAVDLVSRLLQYSPNLRCTALEA 371
Y E + P+ + + K+F +K +A DL+S++L + R + EA
Sbjct: 257 RTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 372 CIHPFFYELRDPN 384
HP+ DP+
Sbjct: 316 LQHPYINVWYDPS 328
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 148/296 (50%), Gaps = 28/296 (9%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN----------RELQTMRLLD---HPN 145
+G G++G V++A+ +G VA+K V R N RE+ +R L+ HPN
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 146 VVSLKH-CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICR 203
VV L C S TD+ E+ + LV E V + + + +A +P +K Q R
Sbjct: 68 VVRLMDVCATSRTDR-EIKVTLVFEHVDQDL---RTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPE 263
L ++H + HRD+KP+N+LV VKL DFG A++ + + +YRAPE
Sbjct: 124 GLDFLHANC-IVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPE 181
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 323
++ +T Y T +D+WSVGC+ AE+ +PLF G S DQL +I ++G P ++ +
Sbjct: 182 VLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP-RDV 239
Query: 324 NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYE 379
+ FP P + + M L+ +L ++P+ R +A A H + ++
Sbjct: 240 SLPRGAFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 147/299 (49%), Gaps = 31/299 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-------------RELQTMRLLD--- 142
+G G++G V++A+ +G VA+K V R N RE+ +R L+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGGGGGGGLPISTVREVALLRRLEAFE 72
Query: 143 HPNVVSLKH-CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQ 200
HPNVV L C S TD+ E+ + LV E V + + + +A +P +K Q
Sbjct: 73 HPNVVRLMDVCATSRTDR-EIKVTLVFEHVDQDL---RTYLDKAPPPGLPAETIKDLMRQ 128
Query: 201 ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR 260
R L ++H + HRD+KP+N+LV VKL DFG A++ + + +YR
Sbjct: 129 FLRGLDFLHANC-IVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALTPVVVTLWYR 186
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 320
APE++ +T Y T +D+WSVGC+ AE+ +PLF G S DQL +I ++G P ++
Sbjct: 187 APEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP- 244
Query: 321 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYE 379
+ + FP P + M L+ +L ++P+ R +A A H + ++
Sbjct: 245 RDVSLPRGAFPPRGPRPVQSVV-PEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 302
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 158/360 (43%), Gaps = 78/360 (21%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDHPN 145
+Y + ++G+GS+G V+ A + VAIKKV L D + RE+ + L
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 88
Query: 146 VVSLKHCFF--STTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICR 203
++ L DELY+ VLE + ++ K +++ +VK Y +
Sbjct: 89 IIRLHDLIIPEDLLKFDELYI--VLEIADSDLKKLFKTPIFLTEQ----HVKTILYNLLL 142
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI------------ 251
+IH G+ HRD+KP N L+N VK+CDFG A+ + + +I
Sbjct: 143 GEKFIHES-GIIHRDLKPANCLLNQDC-SVKICDFGLART-INSDKDIHIVNDLEEKEEN 199
Query: 252 ---------------SYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQ----- 291
S++ +R+YRAPELI YT +IDIWS GC+ AELL
Sbjct: 200 EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHIN 259
Query: 292 ------PLFPG-----------------ESGVDQLVEIIKVLGTPTREEIKCMNPN---- 324
PLFPG +S DQL I V+GTP E++KC+
Sbjct: 260 NPTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIK 319
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPN 384
Y + FP K + + E +DL+ +L+++ R T +A HP+ ++R N
Sbjct: 320 YIKL-FPTRDGIDLSKKY-SSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDVRKEN 377
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 131/242 (54%), Gaps = 22/242 (9%)
Query: 83 RNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLD 142
+NG+ K Y + ++G+GSFG V +A E VAIK + K + N+ +RLL+
Sbjct: 47 KNGE-KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE 105
Query: 143 HPN---------VVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIY 193
N +V LK F +L LV E + +Y + ++ + + L
Sbjct: 106 LMNKHDTEMKYYIVHLKRHFMFRN-----HLCLVFEMLSYNLYDLLRNTNFRGVSLNL-- 158
Query: 194 VKLYTYQICRALAYIHG-GIGVCHRDIKPQN-LLVNPHTHQVKLCDFGSAKVLVKGEPNI 251
+ + Q+C AL ++ + + H D+KP+N LL NP +K+ DFGS+ L G+
Sbjct: 159 TRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIY 216
Query: 252 SYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 311
I SR+YR+PE++ G Y AID+WS+GC+L E+ G+PLF G + VDQ+ +I++VLG
Sbjct: 217 QXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLG 275
Query: 312 TP 313
P
Sbjct: 276 IP 277
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 131/242 (54%), Gaps = 22/242 (9%)
Query: 83 RNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLD 142
+NG+ K Y + ++G+GSFG V +A E VAIK + K + N+ +RLL+
Sbjct: 47 KNGE-KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE 105
Query: 143 HPN---------VVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIY 193
N +V LK F +L LV E + +Y + ++ + + L
Sbjct: 106 LMNKHDTEMKYYIVHLKRHFMFRN-----HLCLVFEMLSYNLYDLLRNTNFRGVSLNL-- 158
Query: 194 VKLYTYQICRALAYIHG-GIGVCHRDIKPQN-LLVNPHTHQVKLCDFGSAKVLVKGEPNI 251
+ + Q+C AL ++ + + H D+KP+N LL NP +K+ DFGS+ L G+
Sbjct: 159 TRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQL--GQRIY 216
Query: 252 SYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 311
I SR+YR+PE++ G Y AID+WS+GC+L E+ G+PLF G + VDQ+ +I++VLG
Sbjct: 217 QXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLG 275
Query: 312 TP 313
P
Sbjct: 276 IP 277
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 131/242 (54%), Gaps = 22/242 (9%)
Query: 83 RNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLD 142
+NG+ K Y + ++G+GSFG V +A E VAIK + K + N+ +RLL+
Sbjct: 28 KNGE-KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE 86
Query: 143 HPN---------VVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIY 193
N +V LK F +L LV E + +Y + ++ + + L
Sbjct: 87 LMNKHDTEMKYYIVHLKRHFMFRN-----HLCLVFEMLSYNLYDLLRNTNFRGVSLNL-- 139
Query: 194 VKLYTYQICRALAYIHG-GIGVCHRDIKPQN-LLVNPHTHQVKLCDFGSAKVLVKGEPNI 251
+ + Q+C AL ++ + + H D+KP+N LL NP +K+ DFGS+ L G+
Sbjct: 140 TRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIY 197
Query: 252 SYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 311
I SR+YR+PE++ G Y AID+WS+GC+L E+ G+PLF G + VDQ+ +I++VLG
Sbjct: 198 QXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLG 256
Query: 312 TP 313
P
Sbjct: 257 IP 258
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 149/305 (48%), Gaps = 30/305 (9%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+GQG+FG VF+A+ +TG+ VA+KKVL + + RE++ ++LL H NVV+L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 153 FFSTTD-----KDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
+ K +YL V +F + +A S + L +K + L Y
Sbjct: 86 CRTKASPYNRCKGSIYL--VFDFCE---HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV---KGEPN--ISYICSRYYRAP 262
IH + HRD+K N+L+ +KL DFG A+ +PN + + + +YR P
Sbjct: 141 IHRN-KILHRDMKAANVLIT-RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
EL+ G +Y ID+W GC++AE+ P+ G + QL I ++ G+ T E ++
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 258
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMP----PEAVDLVSRLLQYSPNLRCTALEACIHPFFY 378
NY ++ ++ K+ + P A+DL+ +LL P R + +A H FF+
Sbjct: 259 -NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFW 317
Query: 379 ELRDP 383
DP
Sbjct: 318 S--DP 320
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 152/303 (50%), Gaps = 26/303 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSL-KH 151
+GQG+FG VF+A+ +TG+ VA+KKVL + + RE++ ++LL H NVV+L +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 152 CFFSTT--DKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
C + ++ + + LV +F + +A S + L +K + L YIH
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCE---HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 142
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV---KGEPN--ISYICSRYYRAPEL 264
+ HRD+K N+L+ +KL DFG A+ +PN + + + +YR PEL
Sbjct: 143 RN-KILHRDMKAANVLIT-RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPEL 200
Query: 265 IFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 324
+ G +Y ID+W GC++AE+ P+ G + QL I ++ G+ T E ++ N
Sbjct: 201 LLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD-N 259
Query: 325 YTEFKFPQIKAHPWHKIFHKRMP----PEAVDLVSRLLQYSPNLRCTALEACIHPFFYEL 380
Y ++ ++ K+ + P A+DL+ +LL P R + +A H FF+
Sbjct: 260 YELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS- 318
Query: 381 RDP 383
DP
Sbjct: 319 -DP 320
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 149/305 (48%), Gaps = 30/305 (9%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+GQG+FG VF+A+ +TG+ VA+KKVL + + RE++ ++LL H NVV+L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 153 FFSTTD-----KDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
+ K +YL V +F + +A S + L +K + L Y
Sbjct: 86 CRTKASPYNRCKGSIYL--VFDFCE---HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV---KGEPN--ISYICSRYYRAP 262
IH + HRD+K N+L+ +KL DFG A+ +PN + + + +YR P
Sbjct: 141 IHRN-KILHRDMKAANVLIT-RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
EL+ G +Y ID+W GC++AE+ P+ G + QL I ++ G+ T E ++
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 258
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMP----PEAVDLVSRLLQYSPNLRCTALEACIHPFFY 378
NY ++ ++ K+ + P A+DL+ +LL P R + +A H FF+
Sbjct: 259 -NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFW 317
Query: 379 ELRDP 383
DP
Sbjct: 318 S--DP 320
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 149/305 (48%), Gaps = 30/305 (9%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 152
+GQG+FG VF+A+ +TG+ VA+KKVL + + RE++ ++LL H NVV+L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 153 FFSTTD-----KDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
+ K +YL V +F + +A S + L +K + L Y
Sbjct: 85 CRTKASPYNRCKGSIYL--VFDFCE---HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 139
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV---KGEPN--ISYICSRYYRAP 262
IH + HRD+K N+L+ +KL DFG A+ +PN + + + +YR P
Sbjct: 140 IHRN-KILHRDMKAANVLIT-RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 197
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
EL+ G +Y ID+W GC++AE+ P+ G + QL I ++ G+ T E ++
Sbjct: 198 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 257
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMP----PEAVDLVSRLLQYSPNLRCTALEACIHPFFY 378
NY ++ ++ K+ + P A+DL+ +LL P R + +A H FF+
Sbjct: 258 -NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFW 316
Query: 379 ELRDP 383
DP
Sbjct: 317 S--DP 319
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 137/295 (46%), Gaps = 49/295 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIK-------KVLQDKRYKNRELQTMRLLDHPN 145
Y +RV+G+GSFG V K TG+ A+K K DK RE+Q ++ LDHPN
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 111
Query: 146 VVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSR--ASQRMPLIYVKLYTYQICR 203
++ L F +D+ Y LV E VY + + + +R + Q+
Sbjct: 112 IMKLYEFF-----EDKGYFYLVGE-----VYTGGELFDEIISRKRFSEVDAARIIRQVLS 161
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRA 261
+ Y+H + HRD+KP+NLL+ + +++ DFG + + I + YY A
Sbjct: 162 GITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIA 220
Query: 262 PELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 321
PE++ G Y D+WS G +L LL G P F G + D L ++ K
Sbjct: 221 PEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------------- 265
Query: 322 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
YT F+ PQ W K++ A DL+ ++L Y P++R +A +A H +
Sbjct: 266 -GKYT-FELPQ-----W-----KKVSESAKDLIRKMLTYVPSMRISARDALDHEW 308
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 137/295 (46%), Gaps = 49/295 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIK-------KVLQDKRYKNRELQTMRLLDHPN 145
Y +RV+G+GSFG V K TG+ A+K K DK RE+Q ++ LDHPN
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 110
Query: 146 VVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSR--ASQRMPLIYVKLYTYQICR 203
++ L F +D+ Y LV E VY + + + +R + Q+
Sbjct: 111 IMKLYEFF-----EDKGYFYLVGE-----VYTGGELFDEIISRKRFSEVDAARIIRQVLS 160
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPNISYICSRYYRA 261
+ Y+H + HRD+KP+NLL+ + +++ DFG + + I + YY A
Sbjct: 161 GITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIA 219
Query: 262 PELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 321
PE++ G Y D+WS G +L LL G P F G + D L ++ K
Sbjct: 220 PEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------------- 264
Query: 322 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
YT F+ PQ W K++ A DL+ ++L Y P++R +A +A H +
Sbjct: 265 -GKYT-FELPQ-----W-----KKVSESAKDLIRKMLTYVPSMRISARDALDHEW 307
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 138/295 (46%), Gaps = 49/295 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQ-------DKRYKNRELQTMRLLDHPN 145
Y +RV+G+GSFG V K TG+ A+K + + DK RE+Q ++ LDHPN
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 146 VVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSR--ASQRMPLIYVKLYTYQICR 203
++ L F +D+ Y LV E VY + + + +R + Q+
Sbjct: 88 IMKLYEFF-----EDKGYFYLVGE-----VYTGGELFDEIISRKRFSEVDAARIIRQVLS 137
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPNISYICSRYYRA 261
+ Y+H + HRD+KP+NLL+ + +++ DFG + + I + YY A
Sbjct: 138 GITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIA 196
Query: 262 PELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 321
PE++ G Y D+WS G +L LL G P F G + D L ++ K
Sbjct: 197 PEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------------- 241
Query: 322 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
YT F+ PQ W K++ A DL+ ++L Y P++R +A +A H +
Sbjct: 242 -GKYT-FELPQ-----W-----KKVSESAKDLIRKMLTYVPSMRISARDALDHEW 284
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 157/357 (43%), Gaps = 49/357 (13%)
Query: 85 GQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHP 144
G+P + Y+ R +G G F V+ AK + VA+K V DK Y ++LL
Sbjct: 13 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRV 72
Query: 145 N--------VVSLKHCF-----FSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPL 191
N + H F+ + +++ +V E + E + + K Y +PL
Sbjct: 73 NDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRG--IPL 130
Query: 192 IYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVN-----PHTHQVKLCDFGSAKVLVK 246
IYVK + Q+ L Y+H G+ H DIKP+N+L+ + Q+K+ D G+A
Sbjct: 131 IYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWY 188
Query: 247 GEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESG------V 300
E + I +R YR+PE++ GA + DIWS C++ EL+ G LF + G
Sbjct: 189 DEHYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247
Query: 301 DQLVEIIKVLG------------TPTREEIKCMNPNYTEFKFPQIKAHPWHKI-FHKRMP 347
D + +II++LG T T + + N ++ KF ++ K F K
Sbjct: 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEA 307
Query: 348 PEAVDLVSRLLQYSPNLRCTALEACIHPFFY------ELRDPNARL-PNGRPFPPLF 397
E D +S +LQ P R A HP+ E+R P+ L +G P F
Sbjct: 308 KEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVPDRELYGSGSDIPGWF 364
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 157/357 (43%), Gaps = 49/357 (13%)
Query: 85 GQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHP 144
G+P + Y+ R +G G F V+ AK + VA+K V DK Y ++LL
Sbjct: 13 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRV 72
Query: 145 N--------VVSLKHCF-----FSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPL 191
N + H F+ + +++ +V E + E + + K Y +PL
Sbjct: 73 NDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRG--IPL 130
Query: 192 IYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVN-----PHTHQVKLCDFGSAKVLVK 246
IYVK + Q+ L Y+H G+ H DIKP+N+L+ + Q+K+ D G+A
Sbjct: 131 IYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWY 188
Query: 247 GEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESG------V 300
E + I +R YR+PE++ GA + DIWS C++ EL+ G LF + G
Sbjct: 189 DEHYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247
Query: 301 DQLVEIIKVLG------------TPTREEIKCMNPNYTEFKFPQIKAHPWHKI-FHKRMP 347
D + +II++LG T T + + N ++ KF ++ K F K
Sbjct: 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEA 307
Query: 348 PEAVDLVSRLLQYSPNLRCTALEACIHPFFY------ELRDPNARL-PNGRPFPPLF 397
E D +S +LQ P R A HP+ E+R P+ L +G P F
Sbjct: 308 KEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVPDRELYGSGSDIPGWF 364
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 145/299 (48%), Gaps = 60/299 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 149
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
+F+ D ++LY L E + Y R + YT +I AL Y+H
Sbjct: 99 ---YFTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 150
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 266
G G+ HRD+KP+N+L+N H +++ DFG+AKVL K S++ + Y +PEL+
Sbjct: 151 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 208
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPN 324
+ ++ D+W++GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 209 EKSACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL--------------- 250
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFF 377
E+ FP+ K F P+A DLV +L L + L C +E HPFF
Sbjct: 251 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 295
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 145/299 (48%), Gaps = 60/299 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 149
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
+F+ D ++LY L E + Y R + YT +I AL Y+H
Sbjct: 95 ---YFTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 146
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 266
G G+ HRD+KP+N+L+N H +++ DFG+AKVL K S++ + Y +PEL+
Sbjct: 147 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 204
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPN 324
+ ++ D+W++GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 205 EKSACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL--------------- 246
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFF 377
E+ FP+ K F P+A DLV +L L + L C +E HPFF
Sbjct: 247 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 291
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 138/295 (46%), Gaps = 49/295 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQ-------DKRYKNRELQTMRLLDHPN 145
Y +RV+G+GSFG V K TG+ A+K + + DK RE+Q ++ LDHPN
Sbjct: 34 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 93
Query: 146 VVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSR--ASQRMPLIYVKLYTYQICR 203
++ L F +D+ Y LV E VY + + + +R + Q+
Sbjct: 94 IMKLYEFF-----EDKGYFYLVGE-----VYTGGELFDEIISRKRFSEVDAARIIRQVLS 143
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPNISYICSRYYRA 261
+ Y+H + HRD+KP+NLL+ + +++ DFG + + I + YY A
Sbjct: 144 GITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIA 202
Query: 262 PELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 321
PE++ G Y D+WS G +L LL G P F G + D L ++ K
Sbjct: 203 PEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------------- 247
Query: 322 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
YT F+ PQ W K++ A DL+ ++L Y P++R +A +A H +
Sbjct: 248 -GKYT-FELPQ-----W-----KKVSESAKDLIRKMLTYVPSMRISARDALDHEW 290
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 144/299 (48%), Gaps = 60/299 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 149
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
+F+ D ++LY L E + Y R + YT +I AL Y+H
Sbjct: 98 ---YFTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 266
G G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 150 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPN 324
+ ++ D+W++GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 208 EKSAXKSS-DLWALGCIIYQLVAGLP--PFRAGNEGLIFAKIIKL--------------- 249
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFF 377
E+ FP+ K F P+A DLV +L L + L C +E HPFF
Sbjct: 250 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 143/299 (47%), Gaps = 60/299 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 149
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 43 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 102
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
CF D ++LY L E + Y R + YT +I AL Y+H
Sbjct: 103 YFCF---QDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 154
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 266
G G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 155 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 212
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPN 324
+ ++ D+W++GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 213 EKSACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL--------------- 254
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFF 377
E+ FP+ K F P+A DLV +L L + L C +E HPFF
Sbjct: 255 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 299
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 145/299 (48%), Gaps = 60/299 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 149
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
+F+ D ++LY L E + Y R + YT +I AL Y+H
Sbjct: 96 ---YFTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 266
G G+ HRD+KP+N+L+N H +++ DFG+AKVL K +++ + Y +PEL+
Sbjct: 148 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT 205
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPN 324
+ ++ D+W++GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 206 EKSACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL--------------- 247
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFF 377
E+ FP+ K F P+A DLV +L L + L C +E HPFF
Sbjct: 248 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 146/304 (48%), Gaps = 70/304 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 149
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKH-----YSRASQRMPLIYVKLYTYQICRA 204
+F+ D ++LY L AK+ Y R + YT +I A
Sbjct: 98 ---YFTFQDDEKLYFGL----------SYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSA 144
Query: 205 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRA 261
L Y+HG G+ HRD+KP+N+L+N H +++ DFG+AKVL K S++ + Y +
Sbjct: 145 LEYLHGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANSFVGTAQYVS 202
Query: 262 PELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIK 319
PEL+ + ++ D+W++GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 203 PELLTEKSASKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL---------- 249
Query: 320 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----I 373
E+ FP+ K F P+A DLV +L L + L C +E
Sbjct: 250 -------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKA 290
Query: 374 HPFF 377
HPFF
Sbjct: 291 HPFF 294
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 144/299 (48%), Gaps = 60/299 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 149
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
+F+ D ++LY L E + Y R + YT +I AL Y+H
Sbjct: 98 ---YFTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 266
G G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 150 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPN 324
+ ++ D+W++GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 208 EKSACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL--------------- 249
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFF 377
E+ FP+ K F P+A DLV +L L + L C +E HPFF
Sbjct: 250 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 144/299 (48%), Gaps = 60/299 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 149
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
+F+ D ++LY L E + Y R + YT +I AL Y+H
Sbjct: 96 ---YFTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 266
G G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 148 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPN 324
+ ++ D+W++GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 206 EKSACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL--------------- 247
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFF 377
E+ FP+ K F P+A DLV +L L + L C +E HPFF
Sbjct: 248 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 144/299 (48%), Gaps = 60/299 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 149
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
+F+ D ++LY L E + Y R + YT +I AL Y+H
Sbjct: 98 ---YFTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 266
G G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 150 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPN 324
+ ++ D+W++GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 208 EKSACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL--------------- 249
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFF 377
E+ FP+ K F P+A DLV +L L + L C +E HPFF
Sbjct: 250 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 144/299 (48%), Gaps = 60/299 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 149
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
+F+ D ++LY L E + Y R + YT +I AL Y+H
Sbjct: 98 ---YFTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 266
G G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 150 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPN 324
+ ++ D+W++GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 208 EKSACKSS-DLWALGCIIYQLVAGLP--PFRAGNEGLIFAKIIKL--------------- 249
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFF 377
E+ FP+ K F P+A DLV +L L + L C +E HPFF
Sbjct: 250 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 144/299 (48%), Gaps = 60/299 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 149
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
+F+ D ++LY L E + Y R + YT +I AL Y+H
Sbjct: 96 ---YFTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 266
G G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 148 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPN 324
+ ++ D+W++GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 206 EKSACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL--------------- 247
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFF 377
E+ FP+ K F P+A DLV +L L + L C +E HPFF
Sbjct: 248 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 144/299 (48%), Gaps = 60/299 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 149
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
+F+ D ++LY L E + Y R + YT +I AL Y+H
Sbjct: 99 ---YFTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 150
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 266
G G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 151 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 208
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPN 324
+ ++ D+W++GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 209 EKSACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL--------------- 250
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFF 377
E+ FP+ K F P+A DLV +L L + L C +E HPFF
Sbjct: 251 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 295
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 144/299 (48%), Gaps = 60/299 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 149
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 14 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 73
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
+F+ D ++LY L E + Y R + YT +I AL Y+H
Sbjct: 74 ---YFTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 125
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 266
G G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 126 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 183
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPN 324
+ ++ D+W++GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 184 EKSACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL--------------- 225
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFF 377
E+ FP+ K F P+A DLV +L L + L C +E HPFF
Sbjct: 226 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 270
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 144/299 (48%), Gaps = 60/299 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 149
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
+F+ D ++LY L E + Y R + YT +I AL Y+H
Sbjct: 98 ---YFTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 266
G G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 150 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPN 324
+ ++ D+W++GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 208 EKSACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL--------------- 249
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFF 377
E+ FP+ K F P+A DLV +L L + L C +E HPFF
Sbjct: 250 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 144/299 (48%), Gaps = 60/299 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 149
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 13 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 72
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
+F+ D ++LY L E + Y R + YT +I AL Y+H
Sbjct: 73 ---YFTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 124
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 266
G G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 125 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 182
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPN 324
+ ++ D+W++GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 183 EKSACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL--------------- 224
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFF 377
E+ FP+ K F P+A DLV +L L + L C +E HPFF
Sbjct: 225 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 269
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 144/299 (48%), Gaps = 60/299 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 149
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
+F+ D ++LY L E + Y R + YT +I AL Y+H
Sbjct: 95 ---YFTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 146
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 266
G G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 147 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 204
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPN 324
+ ++ D+W++GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 205 EKSACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL--------------- 246
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFF 377
E+ FP+ K F P+A DLV +L L + L C +E HPFF
Sbjct: 247 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 291
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 144/299 (48%), Gaps = 60/299 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 149
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 15 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 74
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
+F+ D ++LY L E + Y R + YT +I AL Y+H
Sbjct: 75 ---YFTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 126
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 266
G G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 127 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 184
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPN 324
+ ++ D+W++GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 185 EKSACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL--------------- 226
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFF 377
E+ FP+ K F P+A DLV +L L + L C +E HPFF
Sbjct: 227 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 271
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 144/299 (48%), Gaps = 60/299 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 149
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 16 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 75
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
+F+ D ++LY L E + Y R + YT +I AL Y+H
Sbjct: 76 ---YFTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 127
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 266
G G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 128 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 185
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPN 324
+ ++ D+W++GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 186 EKSACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL--------------- 227
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFF 377
E+ FP+ K F P+A DLV +L L + L C +E HPFF
Sbjct: 228 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 272
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 144/299 (48%), Gaps = 60/299 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 149
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 20 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 79
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
+F+ D ++LY L E + Y R + YT +I AL Y+H
Sbjct: 80 ---YFTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 131
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 266
G G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 132 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 189
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPN 324
+ ++ D+W++GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 190 EKSACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL--------------- 231
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFF 377
E+ FP+ K F P+A DLV +L L + L C +E HPFF
Sbjct: 232 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 276
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 133/295 (45%), Gaps = 49/295 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIK-------KVLQDKRYKNRELQTMRLLDHPN 145
Y +RV+G+GSFG V K TG+ A+K K DK RE+Q ++ LDHPN
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 146 VVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSR--ASQRMPLIYVKLYTYQICR 203
+ L F +D+ Y LV E VY + + + +R + Q+
Sbjct: 88 IXKLYEFF-----EDKGYFYLVGE-----VYTGGELFDEIISRKRFSEVDAARIIRQVLS 137
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRA 261
+ Y H + HRD+KP+NLL+ + +++ DFG + + I + YY A
Sbjct: 138 GITYXHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIA 196
Query: 262 PELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 321
PE++ G Y D+WS G +L LL G P F G + D L ++ K
Sbjct: 197 PEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------------- 241
Query: 322 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
YT F+ PQ W K++ A DL+ + L Y P+ R +A +A H +
Sbjct: 242 -GKYT-FELPQ-----W-----KKVSESAKDLIRKXLTYVPSXRISARDALDHEW 284
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 143/299 (47%), Gaps = 60/299 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 149
+++G+GSF A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 36 KILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
+F+ D ++LY L E + Y R + YT +I AL Y+H
Sbjct: 96 ---YFTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 266
G G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 148 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPN 324
+ ++ D+W++GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 206 EKSACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL--------------- 247
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFF 377
E+ FP+ K F P+A DLV +L L + L C +E HPFF
Sbjct: 248 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 141/299 (47%), Gaps = 60/299 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 149
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 41 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 100
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
+F+ D ++LY L E + Y R + YT +I AL Y+H
Sbjct: 101 ---YFTFQDDEKLYFGLSYAKNGELL-----KYIRKIGSFDETCTRFYTAEIVSALEYLH 152
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 266
G G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 153 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 210
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPN 324
+ ++ D+W++GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 211 EKSACKSS-DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL--------------- 252
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFF 377
E+ FP P+A DLV +L L + L C +E HPFF
Sbjct: 253 --EYDFPAA------------FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 297
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 109/215 (50%), Gaps = 17/215 (7%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKV----LQDKRYKN---RELQTMRLLDHP 144
++ E+ +G+G F V++A CL G VA+KKV L D + + +E+ ++ L+HP
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 145 NVVSLKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICR 203
NV+ F + LN+VLE + R+ KH+ + + +P V Y Q+C
Sbjct: 93 NVIKYYASFIEDNE-----LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCS 147
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL-VKGEPNISYICSRYYRAP 262
AL ++H V HRDIKP N+ + T VKL D G + K S + + YY +P
Sbjct: 148 ALEHMHSR-RVMHRDIKPANVFITA-TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSP 205
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGE 297
E I Y DIWS+GC+L E+ Q F G+
Sbjct: 206 ERIH-ENGYNFKSDIWSLGCLLYEMAALQSPFYGD 239
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 144/327 (44%), Gaps = 62/327 (18%)
Query: 98 VVGQGSFGIVFQAKCLET---GETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFF 154
+G+G+FG V + C++ G VA+K V RY +++L+H N F
Sbjct: 21 TLGEGAFGKVVE--CIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFR 78
Query: 155 STTDKDEL----YLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
+ ++ +V E + + Y K R+ +++ YQIC+++ ++H
Sbjct: 79 CVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLD--HIRKMAYQICKSVNFLHS 136
Query: 211 GIGVCHRDIKPQNLL---------------------VNPHTHQVKLCDFGSAKVLVKGEP 249
+ H D+KP+N+L +NP +K+ DFGSA E
Sbjct: 137 N-KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINP---DIKVVDFGSATY--DDEH 190
Query: 250 NISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKV 309
+ + + +R+YRAPE+I A ++ D+WS+GC+L E LG +FP + L + ++
Sbjct: 191 HSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERI 249
Query: 310 LG---------TPTREEIKCMNPNYTEF----KFPQIKAHPWHKIF------HKRMPPEA 350
LG T R+ ++ E ++ P + H+R+
Sbjct: 250 LGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERL---- 305
Query: 351 VDLVSRLLQYSPNLRCTALEACIHPFF 377
DL+ ++L+Y P R T EA HPFF
Sbjct: 306 FDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 122/286 (42%), Gaps = 38/286 (13%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQ-DKRYK---NRELQTMRLLDHPNVVSLKHCF 153
V+G+G++GIV+ + L +AIK++ + D RY + E+ + L H N+V F
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 154 FSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIG 213
+ ++ + +E VP + + YT QI L Y+H
Sbjct: 89 -----SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN-Q 142
Query: 214 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP-NISYICSRYYRAPELIF-GATEY 271
+ HRDIK N+L+N ++ +K+ DFG++K L P ++ + Y APE+I G Y
Sbjct: 143 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGY 202
Query: 272 TTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFP 331
A DIWS+GC + E+ G+P F + P FK
Sbjct: 203 GKAADIWSLGCTIIEMATGKPPF-----------------------YELGEPQAAMFKVG 239
Query: 332 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
K HP + M EA + + + P+ R A + + F
Sbjct: 240 MFKVHPE---IPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFL 282
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 134/308 (43%), Gaps = 49/308 (15%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-------RELQTMRLLDHPNVVSLK 150
++G+GSFG V + K T + A+K V+ KN RE++ ++ LDHPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK-VINKASAKNKDTSTILREVELLKKLDHPNIMKL- 86
Query: 151 HCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F D Y+ L E + K R S+ +K Q+ + Y+H
Sbjct: 87 --FEILEDSSSFYIVGELYTGGELFDEIIKR-KRFSEHDAARIIK----QVFSGITYMHK 139
Query: 211 GIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
+ HRD+KP+N+L+ +K+ DFG + + I + YY APE++ G
Sbjct: 140 H-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT 198
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
Y D+WS G +L LL G P F G++ D L K + F
Sbjct: 199 --YDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL---------------KRVETGKYAF 241
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNARLP 388
PQ W I +A DL+ ++L + P+LR TA + HP+ ++ ++ P
Sbjct: 242 DLPQ-----WRTI-----SDDAKDLIRKMLTFHPSLRITATQCLEHPW---IQKYSSETP 288
Query: 389 NGRPFPPL 396
P L
Sbjct: 289 TISDLPSL 296
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 122/286 (42%), Gaps = 38/286 (13%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQ-DKRYK---NRELQTMRLLDHPNVVSLKHCF 153
V+G+G++GIV+ + L +AIK++ + D RY + E+ + L H N+V F
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 154 FSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIG 213
+ ++ + +E VP + + YT QI L Y+H
Sbjct: 75 -----SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN-Q 128
Query: 214 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP-NISYICSRYYRAPELIF-GATEY 271
+ HRDIK N+L+N ++ +K+ DFG++K L P ++ + Y APE+I G Y
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGY 188
Query: 272 TTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFP 331
A DIWS+GC + E+ G+P F + P FK
Sbjct: 189 GKAADIWSLGCTIIEMATGKPPF-----------------------YELGEPQAAMFKVG 225
Query: 332 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
K HP + M EA + + + P+ R A + + F
Sbjct: 226 MFKVHPE---IPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFL 268
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 134/295 (45%), Gaps = 50/295 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV----LQDKRYKNRELQTMRLLDHPNVVS 148
Y E +G+GS+G V A T A KK+ ++D +E++ M+ LDHPN++
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 149 LKHCFFSTTDKDELYLNLVL----EFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRA 204
L F TD +YL + L E V++ S A++ M + A
Sbjct: 88 LYETFEDNTD---IYLVMELCTGGELFERVVHKRVFRESDAARIMK---------DVLSA 135
Query: 205 LAYIHGGIGVCHRDIKPQN--LLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
+AY H + V HRD+KP+N L + +KL DFG A G+ + + + YY +P
Sbjct: 136 VAYCH-KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSP 194
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
+++ G Y D WS G ++ LL G P F + + +++I + GT
Sbjct: 195 QVLEGL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE--GT---------- 240
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
F FP+ W + P+A L+ RLL SP R T+L+A H +F
Sbjct: 241 -----FTFPE---KDWLNV-----SPQAESLIRRLLTKSPKQRITSLQALEHEWF 282
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 134/295 (45%), Gaps = 50/295 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV----LQDKRYKNRELQTMRLLDHPNVVS 148
Y E +G+GS+G V A T A KK+ ++D +E++ M+ LDHPN++
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 149 LKHCFFSTTDKDELYLNLVL----EFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRA 204
L F TD +YL + L E V++ S A++ M + A
Sbjct: 71 LYETFEDNTD---IYLVMELCTGGELFERVVHKRVFRESDAARIMK---------DVLSA 118
Query: 205 LAYIHGGIGVCHRDIKPQN--LLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
+AY H + V HRD+KP+N L + +KL DFG A G+ + + + YY +P
Sbjct: 119 VAYCH-KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSP 177
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
+++ G Y D WS G ++ LL G P F + + +++I + GT
Sbjct: 178 QVLEGL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE--GT---------- 223
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
F FP+ W + P+A L+ RLL SP R T+L+A H +F
Sbjct: 224 -----FTFPE---KDWLNV-----SPQAESLIRRLLTKSPKQRITSLQALEHEWF 265
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 143/327 (43%), Gaps = 62/327 (18%)
Query: 98 VVGQGSFGIVFQAKCLET---GETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFF 154
+G+G+FG V + C++ G VA+K V RY +++L+H N F
Sbjct: 21 TLGEGAFGKVVE--CIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFR 78
Query: 155 STTDKDEL----YLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
+ ++ +V E + + Y K R+ +++ YQIC+++ ++H
Sbjct: 79 CVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLD--HIRKMAYQICKSVNFLHS 136
Query: 211 GIGVCHRDIKPQNLL---------------------VNPHTHQVKLCDFGSAKVLVKGEP 249
+ H D+KP+N+L +NP +K+ DFGSA E
Sbjct: 137 N-KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINP---DIKVVDFGSATY--DDEH 190
Query: 250 NISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKV 309
+ + + R+YRAPE+I A ++ D+WS+GC+L E LG +FP + L + ++
Sbjct: 191 HSTLVXXRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERI 249
Query: 310 LG---------TPTREEIKCMNPNYTEF----KFPQIKAHPWHKIF------HKRMPPEA 350
LG T R+ ++ E ++ P + H+R+
Sbjct: 250 LGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERL---- 305
Query: 351 VDLVSRLLQYSPNLRCTALEACIHPFF 377
DL+ ++L+Y P R T EA HPFF
Sbjct: 306 FDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 127/288 (44%), Gaps = 46/288 (15%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-------RELQTMRLLDHPNVVSLK 150
++G+GSFG V + K T + A+K V+ KN RE++ ++ LDHPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK-VINKASAKNKDTSTILREVELLKKLDHPNIMKL- 86
Query: 151 HCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F D Y+ L E + K R S+ +K Q+ + Y+H
Sbjct: 87 --FEILEDSSSFYIVGELYTGGELFDEIIKR-KRFSEHDAARIIK----QVFSGITYMHK 139
Query: 211 GIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
+ HRD+KP+N+L+ +K+ DFG + + I + YY APE++ G
Sbjct: 140 H-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT 198
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
Y D+WS G +L LL G P F G++ D L K + F
Sbjct: 199 --YDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL---------------KRVETGKYAF 241
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
PQ W I +A DL+ ++L + P+LR TA + HP+
Sbjct: 242 DLPQ-----WRTI-----SDDAKDLIRKMLTFHPSLRITATQCLEHPW 279
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 132/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ + +A+K + + + K RE++ L HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F +T + L+LE+ P TVYR + S+ ++ Y+ ++ AL+Y
Sbjct: 74 YGYFHDSTR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 125 HSK-KVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + D I +V EF
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRV-----------------EF 223
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 132/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + SR ++ Y+ ++ AL+Y
Sbjct: 78 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSRFDEQRTATYIT----ELANALSYC 128
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ + ++K+ DFG + V + + Y PE+I G
Sbjct: 129 HSK-RVIHRDIKPENLLLGSNG-ELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G P F + + I +V EF
Sbjct: 186 M-HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV-----------------EF 227
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++ + R T E HP+
Sbjct: 228 TFPDF------------VTEGARDLISRLLKHNASQRLTLAEVLEHPW 263
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 127/288 (44%), Gaps = 46/288 (15%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-------RELQTMRLLDHPNVVSLK 150
++G+GSFG V + K T + A+K V+ KN RE++ ++ LDHPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK-VINKASAKNKDTSTILREVELLKKLDHPNIMKL- 86
Query: 151 HCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F D Y+ L E + K R S+ +K Q+ + Y+H
Sbjct: 87 --FEILEDSSSFYIVGELYTGGELFDEIIKR-KRFSEHDAARIIK----QVFSGITYMHK 139
Query: 211 GIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
+ HRD+KP+N+L+ +K+ DFG + + I + YY APE++ G
Sbjct: 140 H-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT 198
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
Y D+WS G +L LL G P F G++ D L K + F
Sbjct: 199 --YDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL---------------KRVETGKYAF 241
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
PQ W I +A DL+ ++L + P+LR TA + HP+
Sbjct: 242 DLPQ-----WRTI-----SDDAKDLIRKMLTFHPSLRITATQCLEHPW 279
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 144/306 (47%), Gaps = 56/306 (18%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------------NRELQTMR 139
Y+ + +G G+ G V A +T + VAIK ++ +++ E++ ++
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 70
Query: 140 LLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTY 199
L+HP ++ +K+ F D ++ Y+ L L E +V ++R+ KLY Y
Sbjct: 71 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVV-----GNKRLKEATCKLYFY 121
Query: 200 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNI-SYICS 256
Q+ A+ Y+H G+ HRD+KP+N+L++ +K+ DFG +K+L GE ++ +C
Sbjct: 122 QMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCG 178
Query: 257 R-YYRAPELIF--GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 313
Y APE++ G Y A+D WS+G +L L G P F L
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---------- 228
Query: 314 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACI 373
+++I N+ P++ W ++ K A+DLV +LL P R T EA
Sbjct: 229 -KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEALR 274
Query: 374 HPFFYE 379
HP+ +
Sbjct: 275 HPWLQD 280
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 132/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + SR ++ Y+ ++ AL+Y
Sbjct: 78 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSRFDEQRTATYIT----ELANALSYC 128
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ + ++K+ DFG + V + + Y PE+I G
Sbjct: 129 HSK-RVIHRDIKPENLLLGSNG-ELKIADFGWS-VHAPSSRRDTLCGTLDYLPPEMIEGR 185
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G P F + + I +V EF
Sbjct: 186 M-HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV-----------------EF 227
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++ + R T E HP+
Sbjct: 228 TFPDF------------VTEGARDLISRLLKHNASQRLTLAEVLEHPW 263
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 144/306 (47%), Gaps = 56/306 (18%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------------NRELQTMR 139
Y+ + +G G+ G V A +T + VAIK ++ +++ E++ ++
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 70
Query: 140 LLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTY 199
L+HP ++ +K+ F D ++ Y+ L L E +V ++R+ KLY Y
Sbjct: 71 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVV-----GNKRLKEATCKLYFY 121
Query: 200 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNI-SYICS 256
Q+ A+ Y+H G+ HRD+KP+N+L++ +K+ DFG +K+L GE ++ +C
Sbjct: 122 QMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCG 178
Query: 257 R-YYRAPELIF--GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 313
Y APE++ G Y A+D WS+G +L L G P F L
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---------- 228
Query: 314 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACI 373
+++I N+ P++ W ++ K A+DLV +LL P R T EA
Sbjct: 229 -KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEALR 274
Query: 374 HPFFYE 379
HP+ +
Sbjct: 275 HPWLQD 280
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 144/306 (47%), Gaps = 56/306 (18%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------------NRELQTMR 139
Y+ + +G G+ G V A +T + VAIK ++ +++ E++ ++
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 70
Query: 140 LLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTY 199
L+HP ++ +K+ F D ++ Y+ L L E +V ++R+ KLY Y
Sbjct: 71 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVV-----GNKRLKEATCKLYFY 121
Query: 200 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNI-SYICS 256
Q+ A+ Y+H G+ HRD+KP+N+L++ +K+ DFG +K+L GE ++ +C
Sbjct: 122 QMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCG 178
Query: 257 R-YYRAPELIF--GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 313
Y APE++ G Y A+D WS+G +L L G P F L
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---------- 228
Query: 314 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACI 373
+++I N+ P++ W ++ K A+DLV +LL P R T EA
Sbjct: 229 -KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEALR 274
Query: 374 HPFFYE 379
HP+ +
Sbjct: 275 HPWLQD 280
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 130/288 (45%), Gaps = 41/288 (14%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVL-----QDKRYKNRELQ-TMRLLDHPNVVSLKHC 152
+G+G++G+V + + + +G+ +A+K++ Q+++ +L +MR +D P V+
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
F D + + +E + ++ + K Q +P + I +AL ++H +
Sbjct: 119 LFREGD-----VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 173
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI---FGAT 269
V HRD+KP N+L+N QVK+CDFG + LV + Y APE I
Sbjct: 174 SVIHRDVKPSNVLINA-LGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQK 232
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 329
Y+ DIWS+G + EL + + FP +S GTP ++
Sbjct: 233 GYSVKSDIWSLGITMIELAILR--FPYDS-----------WGTPFQQ------------- 266
Query: 330 FPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
Q+ P ++ + E VD S+ L+ + R T E HPFF
Sbjct: 267 LKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 132/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 31 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 90
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + S+ ++ Y+ ++ AL+Y
Sbjct: 91 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 141
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 142 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 198
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + + I +V EF
Sbjct: 199 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 240
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 241 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 276
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 132/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + S+ ++ Y+ ++ AL+Y
Sbjct: 100 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 150
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 151 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 207
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + + I +V EF
Sbjct: 208 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 249
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 250 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 285
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 144/306 (47%), Gaps = 56/306 (18%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------------NRELQTMR 139
Y+ + +G G+ G V A +T + VAIK ++ +++ E++ ++
Sbjct: 18 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 76
Query: 140 LLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTY 199
L+HP ++ +K+ F D ++ Y+ L L E +V ++R+ KLY Y
Sbjct: 77 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVV-----GNKRLKEATCKLYFY 127
Query: 200 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNI-SYICS 256
Q+ A+ Y+H G+ HRD+KP+N+L++ +K+ DFG +K+L GE ++ +C
Sbjct: 128 QMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCG 184
Query: 257 R-YYRAPELIF--GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 313
Y APE++ G Y A+D WS+G +L L G P F L
Sbjct: 185 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---------- 234
Query: 314 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACI 373
+++I N+ P++ W ++ K A+DLV +LL P R T EA
Sbjct: 235 -KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEALR 280
Query: 374 HPFFYE 379
HP+ +
Sbjct: 281 HPWLQD 286
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 144/306 (47%), Gaps = 56/306 (18%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------------NRELQTMR 139
Y+ + +G G+ G V A +T + VAIK ++ +++ E++ ++
Sbjct: 11 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 69
Query: 140 LLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTY 199
L+HP ++ +K+ F D ++ Y+ L L E +V ++R+ KLY Y
Sbjct: 70 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVV-----GNKRLKEATCKLYFY 120
Query: 200 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNI-SYICS 256
Q+ A+ Y+H G+ HRD+KP+N+L++ +K+ DFG +K+L GE ++ +C
Sbjct: 121 QMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCG 177
Query: 257 R-YYRAPELIF--GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 313
Y APE++ G Y A+D WS+G +L L G P F L
Sbjct: 178 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---------- 227
Query: 314 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACI 373
+++I N+ P++ W ++ K A+DLV +LL P R T EA
Sbjct: 228 -KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEALR 273
Query: 374 HPFFYE 379
HP+ +
Sbjct: 274 HPWLQD 279
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 148/323 (45%), Gaps = 53/323 (16%)
Query: 88 KQTISYMAERV--VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMR 139
K +S M +RV +G G++G V + T AIK + + + E+ ++
Sbjct: 32 KGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLK 91
Query: 140 LLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPL--IYVKLY 197
LLDHPN++ L + FF DK YL V+E Y+ + + RM + +
Sbjct: 92 LLDHPNIMKL-YDFFE--DKRNYYL--VME-----CYKGGELFDEIIHRMKFNEVDAAVI 141
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYIC 255
Q+ + Y+H + HRD+KP+NLL+ +K+ DFG + V + +
Sbjct: 142 IKQVLSGVTYLHKH-NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLG 200
Query: 256 SRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 315
+ YY APE++ +Y D+WS+G +L LL G P F G++ DQ EI++
Sbjct: 201 TAYYIAPEVL--RKKYDEKCDVWSIGVILFILLAGYPPFGGQT--DQ--EILR------- 247
Query: 316 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHP 375
K YT F P+ W K + A DL+ ++LQ+ R +A +A HP
Sbjct: 248 ---KVEKGKYT-FDSPE-----W-----KNVSEGAKDLIKQMLQFDSQRRISAQQALEHP 293
Query: 376 FFYELRDPNARLPNGRPFPPLFN 398
+ E+ ++ +G P L N
Sbjct: 294 WIKEM---CSKKESGIELPSLAN 313
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 132/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + S+ ++ Y+ ++ AL+Y
Sbjct: 79 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 129
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 130 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 186
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + + I +V EF
Sbjct: 187 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 228
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 229 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 132/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + S+ ++ Y+ ++ AL+Y
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 127
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 128 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + + I +V EF
Sbjct: 185 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 226
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 227 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 132/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + S+ ++ Y+ ++ AL+Y
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 127
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 128 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + + I +V EF
Sbjct: 185 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 226
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 227 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 132/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + S+ ++ Y+ ++ AL+Y
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 125 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 181
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + + I +V EF
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 223
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 132/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 13 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 72
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + S+ ++ Y+ ++ AL+Y
Sbjct: 73 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 123
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 124 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 180
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + + I +V EF
Sbjct: 181 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 222
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 223 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 258
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 132/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 18 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + S+ ++ Y+ ++ AL+Y
Sbjct: 78 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 128
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 129 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + + I +V EF
Sbjct: 186 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 227
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 228 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 263
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 132/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + S+ ++ Y+ ++ AL+Y
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 125 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + + I +V EF
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 223
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 131/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + S+ ++ Y+ ++ AL+Y
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 125 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGR 181
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + + I +V EF
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 223
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 131/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + S+ ++ Y+ ++ AL+Y
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 125 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGR 181
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + + I +V EF
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 223
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 131/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + S+ ++ Y+ ++ AL+Y
Sbjct: 100 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 150
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 151 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPEMIEGR 207
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + + I +V EF
Sbjct: 208 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 249
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 250 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 285
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 131/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + S+ ++ Y+ ++ AL+Y
Sbjct: 79 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 129
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 130 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGR 186
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + + I +V EF
Sbjct: 187 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 228
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 229 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 131/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + S+ ++ Y+ ++ AL+Y
Sbjct: 75 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 125
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 126 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGR 182
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + + I +V EF
Sbjct: 183 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 224
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 225 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 133/289 (46%), Gaps = 43/289 (14%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVL-----QDKRYKNRELQ-TMRLLDHPNVVSLKHC 152
+G+G++G+V + + + +G+ +A+K++ Q+++ +L +MR +D P V+
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
F D + + +E + ++ + K Q +P + I +AL ++H +
Sbjct: 75 LFREGD-----VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 129
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-EPNISYICSRYYRAPELI---FGA 268
V HRD+KP N+L+N QVK+CDFG + LV +I C + Y APE I
Sbjct: 130 SVIHRDVKPSNVLINA-LGQVKMCDFGISGYLVDDVAKDIDAGC-KPYMAPERINPELNQ 187
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
Y+ DIWS+G + EL + + FP +S GTP ++
Sbjct: 188 KGYSVKSDIWSLGITMIELAILR--FPYDS-----------WGTPFQQ------------ 222
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
Q+ P ++ + E VD S+ L+ + R T E HPFF
Sbjct: 223 -LKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 270
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 132/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + S+ ++ Y+ ++ AL+Y
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 127
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 128 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGR 184
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + + I +V EF
Sbjct: 185 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 226
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 227 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 140/312 (44%), Gaps = 51/312 (16%)
Query: 85 GQPKQTISYMAERV-VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR------ELQT 137
G P+ SY+ + +G+GS GIV A +G+ VA+KK+ D R + R E+
Sbjct: 20 GDPR---SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVI 74
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLY 197
MR H NVV + + + DEL++ V+EF+ ++R ++ +
Sbjct: 75 MRDYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAV 125
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
+ +AL+ +H GV HRDIK ++L+ H +VKL DFG + K P +
Sbjct: 126 CLAVLQALSVLHAQ-GVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGT 183
Query: 258 -YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 316
Y+ APELI Y +DIWS+G ++ E++ G+P + E P +
Sbjct: 184 PYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPLK 227
Query: 317 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+K + N P K HK + P + RLL P R TA E HPF
Sbjct: 228 AMKMIRDNLP----------PRLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLKHPF 276
Query: 377 FYELRDPNARLP 388
+ P + +P
Sbjct: 277 LAKAGPPASIVP 288
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 137/303 (45%), Gaps = 47/303 (15%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVL----QDKRYKNRELQTMRLLDHPNVVSLKHCFF 154
+G G+FG+V + TG A K V+ DK +E+QTM +L HP +V+L F
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF- 223
Query: 155 STTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+D+ + ++ EF+ E +VA +++ S+ + Y++ Q+C+ L ++H
Sbjct: 224 ----EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR----QVCKGLCHMHEN- 274
Query: 213 GVCHRDIKPQNLL-VNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA-TE 270
H D+KP+N++ ++++KL DFG L + + + APE+ G
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVG 334
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 330
Y T D+WSVG + LL G F GE+ + L +K + N + F
Sbjct: 335 YYT--DMWSVGVLSYILLSGLSPFGGENDDETL------------RNVKSCDWNMDDSAF 380
Query: 331 PQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP--NARLP 388
I + D + +LL PN R T +A HP+ P ++++P
Sbjct: 381 SGISE-------------DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIP 427
Query: 389 NGR 391
+ R
Sbjct: 428 SSR 430
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 132/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + S+ ++ Y+ ++ AL+Y
Sbjct: 75 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 125
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 126 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRDTLCGTLDYLPPEMIEGR 182
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + + I +V EF
Sbjct: 183 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 224
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 225 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 131/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + S+ ++ Y+ ++ AL+Y
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 125 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTELCGTLDYLPPEMIEGR 181
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + + I +V EF
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 223
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 134/297 (45%), Gaps = 47/297 (15%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR------ELQTMRLLDHPNVVSLKHC 152
+G+GS GIV A +G+ VA+KK+ D R + R E+ MR H NVV + +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 139
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ DEL++ V+EF+ ++R ++ + + +AL+ +H
Sbjct: 140 YLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAVCLAVLQALSVLHAQ- 189
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELIFGATEY 271
GV HRDIK ++L+ H +VKL DFG + K P + + Y+ APELI Y
Sbjct: 190 GVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPY 247
Query: 272 TTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFP 331
+DIWS+G ++ E++ G+P + E P + +K + N
Sbjct: 248 GPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPLKAMKMIRDNLP----- 287
Query: 332 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNARLP 388
P K HK + P + RLL P R TA E HPF + P + +P
Sbjct: 288 -----PRLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVP 338
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 131/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + S+ ++ Y+ ++ AL+Y
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 127
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 128 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGR 184
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + + I +V EF
Sbjct: 185 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 226
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 227 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 137/303 (45%), Gaps = 47/303 (15%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVL----QDKRYKNRELQTMRLLDHPNVVSLKHCFF 154
+G G+FG+V + TG A K V+ DK +E+QTM +L HP +V+L F
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF- 117
Query: 155 STTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+D+ + ++ EF+ E +VA +++ S+ + Y++ Q+C+ L ++H
Sbjct: 118 ----EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR----QVCKGLCHMHEN- 168
Query: 213 GVCHRDIKPQNLL-VNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA-TE 270
H D+KP+N++ ++++KL DFG L + + + APE+ G
Sbjct: 169 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVG 228
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 330
Y T D+WSVG + LL G F GE+ + L +K + N + F
Sbjct: 229 YYT--DMWSVGVLSYILLSGLSPFGGENDDETL------------RNVKSCDWNMDDSAF 274
Query: 331 PQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDP--NARLP 388
I + D + +LL PN R T +A HP+ P ++++P
Sbjct: 275 SGISE-------------DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIP 321
Query: 389 NGR 391
+ R
Sbjct: 322 SSR 324
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 131/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + S+ ++ Y+ ++ AL+Y
Sbjct: 76 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 126
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 127 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGR 183
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + + I +V EF
Sbjct: 184 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 225
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 226 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 261
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 140/312 (44%), Gaps = 51/312 (16%)
Query: 85 GQPKQTISYMAERV-VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR------ELQT 137
G P+ SY+ + +G+GS GIV A +G+ VA+KK+ D R + R E+
Sbjct: 16 GDPR---SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVI 70
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLY 197
MR H NVV + + + DEL++ V+EF+ ++R ++ +
Sbjct: 71 MRDYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAV 121
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
+ +AL+ +H GV HRDIK ++L+ H +VKL DFG + K P +
Sbjct: 122 CLAVLQALSVLHAQ-GVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGT 179
Query: 258 -YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 316
Y+ APELI Y +DIWS+G ++ E++ G+P + E P +
Sbjct: 180 PYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPLK 223
Query: 317 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+K + N P K HK + P + RLL P R TA E HPF
Sbjct: 224 AMKMIRDNLP----------PRLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLKHPF 272
Query: 377 FYELRDPNARLP 388
+ P + +P
Sbjct: 273 LAKAGPPASIVP 284
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 131/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + S+ ++ Y+ ++ AL+Y
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 125 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTXLCGTLDYLPPEMIEGR 181
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + + I +V EF
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 223
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 131/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + S+ ++ Y+ ++ AL+Y
Sbjct: 79 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 129
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ DFG + V + + Y PE I G
Sbjct: 130 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEXIEGR 186
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + + I +V EF
Sbjct: 187 X-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 228
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 229 TFPDF------------VTEGARDLISRLLKHNPSQRPXLREVLEHPW 264
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 141/312 (45%), Gaps = 51/312 (16%)
Query: 85 GQPKQTISYMAERV-VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR------ELQT 137
G P+ SY+ + +G+GS GIV A +G+ VA+KK+ D R + R E+
Sbjct: 25 GDPR---SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVI 79
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLY 197
MR H NVV + + + DEL++ V+EF+ ++R ++ +
Sbjct: 80 MRDYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAV 130
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYIC-S 256
+ +AL+ +H GV HRDIK ++L+ H +VKL DFG + K P + +
Sbjct: 131 CLAVLQALSVLHAQ-GVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGT 188
Query: 257 RYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 316
Y+ APELI Y +DIWS+G ++ E++ G+P + E P +
Sbjct: 189 PYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPLK 232
Query: 317 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+K + N P K HK + P + RLL P R TA E HPF
Sbjct: 233 AMKMIRDNLP----------PRLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLKHPF 281
Query: 377 FYELRDPNARLP 388
+ P + +P
Sbjct: 282 LAKAGPPASIVP 293
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 141/312 (45%), Gaps = 51/312 (16%)
Query: 85 GQPKQTISYMAERV-VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR------ELQT 137
G P+ SY+ + +G+GS GIV A +G+ VA+KK+ D R + R E+
Sbjct: 27 GDPR---SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVI 81
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLY 197
MR H NVV + + + DEL++ V+EF+ ++R ++ +
Sbjct: 82 MRDYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAV 132
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYIC-S 256
+ +AL+ +H GV HRDIK ++L+ H +VKL DFG + K P + +
Sbjct: 133 CLAVLQALSVLHAQ-GVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGT 190
Query: 257 RYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 316
Y+ APELI Y +DIWS+G ++ E++ G+P + E P +
Sbjct: 191 PYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPLK 234
Query: 317 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+K + N P K HK + P + RLL P R TA E HPF
Sbjct: 235 AMKMIRDNLP----------PRLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLKHPF 283
Query: 377 FYELRDPNARLP 388
+ P + +P
Sbjct: 284 LAKAGPPASIVP 295
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 134/297 (45%), Gaps = 47/297 (15%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR------ELQTMRLLDHPNVVSLKHC 152
+G+GS GIV A +G+ VA+KK+ D R + R E+ MR H NVV + +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 216
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ DEL++ V+EF+ ++R ++ + + +AL+ +H
Sbjct: 217 YLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAVCLAVLQALSVLHAQ- 266
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELIFGATEY 271
GV HRDIK ++L+ H +VKL DFG + K P + + Y+ APELI Y
Sbjct: 267 GVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPY 324
Query: 272 TTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFP 331
+DIWS+G ++ E++ G+P + E P + +K + N
Sbjct: 325 GPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPLKAMKMIRDNLP----- 364
Query: 332 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNARLP 388
P K HK + P + RLL P R TA E HPF + P + +P
Sbjct: 365 -----PRLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVP 415
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 131/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + S+ ++ Y+ ++ AL+Y
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 125 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGR 181
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + + I +V EF
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 223
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 133/295 (45%), Gaps = 64/295 (21%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + S+ ++ Y+ ++ AL+Y
Sbjct: 75 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 125
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFG-------SAKVLVKGEPNISYICSRYYRA 261
H V HRDIKP+NLL+ ++K+ DFG S + + G + Y
Sbjct: 126 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWSCHAPSSRRTTLSGTLD--------YLP 175
Query: 262 PELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 321
PE+I G + +D+WS+G + E L+G+P F + + I +V
Sbjct: 176 PEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV------------ 222
Query: 322 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
EF FP + A DL+SRLL+++P+ R E HP+
Sbjct: 223 -----EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 131/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ + +A+K + + + K RE++ L HPN++ L
Sbjct: 11 RPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 70
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + S+ ++ Y+ ++ AL+Y
Sbjct: 71 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 121
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 122 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 178
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + + I +V EF
Sbjct: 179 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 220
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 221 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 256
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 131/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + S+ ++ Y+ ++ AL+Y
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 127
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 128 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPEMIEGR 184
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + + I +V EF
Sbjct: 185 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 226
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 227 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 140/302 (46%), Gaps = 52/302 (17%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------------NRELQTMR 139
Y+ + +G G+ G V A +T + VAI+ ++ +++ E++ ++
Sbjct: 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIR-IISKRKFAIGSAREADPALNVETEIEILK 195
Query: 140 LLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTY 199
L+HP ++ +K+ F D ++ Y+ L L E +V ++R+ KLY Y
Sbjct: 196 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVV-----GNKRLKEATCKLYFY 246
Query: 200 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSR 257
Q+ A+ Y+H G+ HRD+KP+N+L++ +K+ DFG +K+L + + +
Sbjct: 247 QMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 305
Query: 258 YYRAPELIF--GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 315
Y APE++ G Y A+D WS+G +L L G P F L +
Sbjct: 306 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-----------K 354
Query: 316 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHP 375
++I N+ P++ W ++ K A+DLV +LL P R T EA HP
Sbjct: 355 DQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEALRHP 401
Query: 376 FF 377
+
Sbjct: 402 WL 403
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 143/304 (47%), Gaps = 56/304 (18%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------------NRELQTMR 139
Y+ + +G G+ G V A +T + VAI+ ++ +++ E++ ++
Sbjct: 151 YIMSKTLGSGACGEVKLAFERKTCKKVAIR-IISKRKFAIGSAREADPALNVETEIEILK 209
Query: 140 LLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTY 199
L+HP ++ +K+ F D ++ Y+ L L E +V ++R+ KLY Y
Sbjct: 210 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVV-----GNKRLKEATCKLYFY 260
Query: 200 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNI-SYICS 256
Q+ A+ Y+H G+ HRD+KP+N+L++ +K+ DFG +K+L GE ++ +C
Sbjct: 261 QMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCG 317
Query: 257 R-YYRAPELIF--GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 313
Y APE++ G Y A+D WS+G +L L G P F L
Sbjct: 318 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---------- 367
Query: 314 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACI 373
+++I N+ P++ W ++ K A+DLV +LL P R T EA
Sbjct: 368 -KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEALR 413
Query: 374 HPFF 377
HP+
Sbjct: 414 HPWL 417
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 132/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + S+ ++ Y+ ++ AL+Y
Sbjct: 76 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 126
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ +FG + V + + Y PE+I G
Sbjct: 127 HSK-RVIHRDIKPENLLLGS-AGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 183
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + + I +V EF
Sbjct: 184 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 225
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 226 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 261
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 132/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 150 KHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P TVYR + S+ ++ Y+ ++ AL+Y
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 127
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ +FG + V + + Y PE+I G
Sbjct: 128 HSK-RVIHRDIKPENLLLGS-AGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + + I +V EF
Sbjct: 185 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 226
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 227 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 116/230 (50%), Gaps = 26/230 (11%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAI--KKVLQDKRYKNRELQTMRL-------LDHPNVV 147
+V+GQGSFG VF K + + + KVL+ K R+ ++ ++HP +V
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIY--VKLYTYQICRAL 205
L + F + E L L+L+F+ R ++R S+ + VK Y ++ AL
Sbjct: 90 KLHYAF-----QTEGKLYLILDFL-----RGGDLFTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-YRAPEL 264
++H +G+ +RD+KP+N+L++ H +KL DFG +K + E C Y APE+
Sbjct: 140 DHLHS-LGIIYRDLKPENILLDEEGH-IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 197
Query: 265 IFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKV-LGTP 313
+ +T + D WS G ++ E+L G F G+ + + I+K LG P
Sbjct: 198 V-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 147/346 (42%), Gaps = 90/346 (26%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDK----------RYKNRELQTMRLLD 142
Y + +GQGS+G+V A +T AIK + ++K R K E++ M+ L
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKT-EVRLMKKLH 86
Query: 143 HPNVVSLKHCFFSTTDKDELYLNLVLE-------------FVPETVYRVAK--------- 180
HPN+ L + +DE Y+ LV+E F+ ++ + A
Sbjct: 87 HPNIARLYEVY-----EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICP 141
Query: 181 -------------HYSRAS----QRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQN 223
H R S QR LI + QI AL Y+H G+CHRDIKP+N
Sbjct: 142 CPECNEEAINGSIHGFRESLDFVQREKLISNIMR--QIFSALHYLHNQ-GICHRDIKPEN 198
Query: 224 LLVNPH-THQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATE-YTTAID 276
L + + + ++KL DFG +K K Y + Y+ APE++ E Y D
Sbjct: 199 FLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258
Query: 277 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH 336
WS G +L LL+G FPG + D + +++ +++ NPNY
Sbjct: 259 AWSAGVLLHLLLMGAVPFPGVNDADTISQVLN-------KKLCFENPNYN---------- 301
Query: 337 PWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRD 382
+ P A DL+S LL + + R A+ A HP+ + D
Sbjct: 302 --------VLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD 339
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 142/302 (47%), Gaps = 46/302 (15%)
Query: 84 NGQPKQTIS--YMAERVVGQGSFGIVFQAKCLETGETVAIK--KVLQDKRYKNRELQTMR 139
+G + +S + E +G+G+ IV++ K T + A+K K DK+ E+ +
Sbjct: 44 DGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLL 103
Query: 140 LLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLY 197
L HPN++ LK F + T+ ++LVLE V E R+ + S+R VK
Sbjct: 104 RLSHPNIIKLKEIFETPTE-----ISLVLELVTGGELFDRIVEK-GYYSERDAADAVK-- 155
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLL-VNPHTHQ-VKLCDFGSAKVLVKGEPNISYIC 255
QI A+AY+H G+ HRD+KP+NLL P +K+ DFG +K+ V+ + + +C
Sbjct: 156 --QILEAVAYLHEN-GIVHRDLKPENLLYATPAPDAPLKIADFGLSKI-VEHQVLMKTVC 211
Query: 256 SR-YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 314
Y APE++ G Y +D+WSVG + LL G F E G DQ +
Sbjct: 212 GTPGYCAPEILRGCA-YGPEVDMWSVGIITYILLCGFEPFYDERG-DQFM---------F 260
Query: 315 REEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIH 374
R + C E+ F PW + A DLV +L+ P R T +A H
Sbjct: 261 RRILNC------EYYF----ISPW----WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306
Query: 375 PF 376
P+
Sbjct: 307 PW 308
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 131/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 150 KHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P VY+ + S+ ++ Y+ ++ AL+Y
Sbjct: 79 YGYFHDATR-----VYLILEYAPRGEVYKELQKLSKFDEQRTATYIT----ELANALSYC 129
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 130 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 186
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + + I +V EF
Sbjct: 187 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 228
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 229 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 116/230 (50%), Gaps = 26/230 (11%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAI--KKVLQDKRYKNRELQTMRL-------LDHPNVV 147
+V+GQGSFG VF K + + + KVL+ K R+ ++ ++HP +V
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIY--VKLYTYQICRAL 205
L + F + E L L+L+F+ R ++R S+ + VK Y ++ AL
Sbjct: 91 KLHYAF-----QTEGKLYLILDFL-----RGGDLFTRLSKEVMFTEEDVKFYLAELALAL 140
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-YRAPEL 264
++H +G+ +RD+KP+N+L++ H +KL DFG +K + E C Y APE+
Sbjct: 141 DHLHS-LGIIYRDLKPENILLDEEGH-IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 198
Query: 265 IFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKV-LGTP 313
+ +T + D WS G ++ E+L G F G+ + + I+K LG P
Sbjct: 199 V-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 247
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 116/230 (50%), Gaps = 26/230 (11%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAI--KKVLQDKRYKNRELQTMRL-------LDHPNVV 147
+V+GQGSFG VF K + + + KVL+ K R+ ++ ++HP +V
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIY--VKLYTYQICRAL 205
L + F + E L L+L+F+ R ++R S+ + VK Y ++ AL
Sbjct: 90 KLHYAF-----QTEGKLYLILDFL-----RGGDLFTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-YRAPEL 264
++H +G+ +RD+KP+N+L++ H +KL DFG +K + E C Y APE+
Sbjct: 140 DHLHS-LGIIYRDLKPENILLDEEGH-IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 197
Query: 265 IFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKV-LGTP 313
+ +T + D WS G ++ E+L G F G+ + + I+K LG P
Sbjct: 198 V-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 135/293 (46%), Gaps = 42/293 (14%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDK-----RYKNRELQTMRLLDHPNVV 147
++ +R +G G+FG V + +G IK + +D+ E++ ++ LDHPN++
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
+ F D +Y+ + E + R+ +R + + YV Q+ ALAY
Sbjct: 84 KIFEVF---EDYHNMYIVMETCEGGELLERIVSAQARG-KALSEGYVAELMKQMMNALAY 139
Query: 208 IHGGIGVCHRDIKPQNLL---VNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 264
H V H+D+KP+N+L +PH+ +K+ DFG A++ E + + + Y APE+
Sbjct: 140 FHSQ-HVVHKDLKPENILFQDTSPHS-PIKIIDFGLAELFKSDEHSTNAAGTALYMAPEV 197
Query: 265 IFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 324
+ T DIWS G V+ LL G F G S L E+ +++ PN
Sbjct: 198 F--KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTS----LEEV--------QQKATYKEPN 243
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
Y ++ P + P+AVDL+ ++L P R +A + H +F
Sbjct: 244 YA------VECRP--------LTPQAVDLLKQMLTKDPERRPSAAQVLHHEWF 282
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 130/288 (45%), Gaps = 50/288 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 150 KHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F T + L+LE+ P VY+ + S+ ++ Y+ ++ AL+Y
Sbjct: 79 YGYFHDATR-----VYLILEYAPRGEVYKELQKLSKFDEQRTATYIT----ELANALSYC 129
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 130 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRXXLXGTLDYLPPEMIEGR 186
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
+ +D+WS+G + E L+G+P F + + I +V EF
Sbjct: 187 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 228
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
FP + A DL+SRLL+++P+ R E HP+
Sbjct: 229 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 18/214 (8%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIK----KVLQDKRYKNR---ELQTMRLLDHP 144
+Y + +G+GSFG V A TG+ VA+K KVL + R E+ +RLL HP
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 145 NVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRA 204
+++ L S KDE+ + V+E+ ++ + S++ + + QI A
Sbjct: 75 HIIKLYDVIKS---KDEIIM--VIEYAGNELFDYIVQRDKMSEQE----ARRFFQQIISA 125
Query: 205 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 264
+ Y H + HRD+KP+NLL++ H + VK+ DFG + ++ G + S Y APE+
Sbjct: 126 VEYCHRH-KIVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 183
Query: 265 IFGATEYTTAIDIWSVGCVLAELLLGQPLFPGES 298
I G +D+WS G +L +L + F ES
Sbjct: 184 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 217
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 18/214 (8%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIK----KVLQDKRYKNR---ELQTMRLLDHP 144
+Y + +G+GSFG V A TG+ VA+K KVL + R E+ +RLL HP
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 145 NVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRA 204
+++ L S KDE+ + V+E+ ++ + S++ + + QI A
Sbjct: 69 HIIKLYDVIKS---KDEIIM--VIEYAGNELFDYIVQRDKMSEQE----ARRFFQQIISA 119
Query: 205 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 264
+ Y H + HRD+KP+NLL++ H + VK+ DFG + ++ G + S Y APE+
Sbjct: 120 VEYCHRH-KIVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 177
Query: 265 IFGATEYTTAIDIWSVGCVLAELLLGQPLFPGES 298
I G +D+WS G +L +L + F ES
Sbjct: 178 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 211
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 18/214 (8%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIK----KVLQDKRYKNR---ELQTMRLLDHP 144
+Y + +G+GSFG V A TG+ VA+K KVL + R E+ +RLL HP
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 145 NVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRA 204
+++ L S KDE+ + V+E+ ++ + S++ + + QI A
Sbjct: 65 HIIKLYDVIKS---KDEIIM--VIEYAGNELFDYIVQRDKMSEQE----ARRFFQQIISA 115
Query: 205 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 264
+ Y H + HRD+KP+NLL++ H + VK+ DFG + ++ G + S Y APE+
Sbjct: 116 VEYCHRH-KIVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 173
Query: 265 IFGATEYTTAIDIWSVGCVLAELLLGQPLFPGES 298
I G +D+WS G +L +L + F ES
Sbjct: 174 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 207
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 18/214 (8%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIK----KVLQDKRYKNR---ELQTMRLLDHP 144
+Y + +G+GSFG V A TG+ VA+K KVL + R E+ +RLL HP
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 145 NVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRA 204
+++ L S KDE+ + V+E+ ++ + S++ + + QI A
Sbjct: 74 HIIKLYDVIKS---KDEIIM--VIEYAGNELFDYIVQRDKMSEQE----ARRFFQQIISA 124
Query: 205 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 264
+ Y H + HRD+KP+NLL++ H + VK+ DFG + ++ G + S Y APE+
Sbjct: 125 VEYCHRH-KIVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 182
Query: 265 IFGATEYTTAIDIWSVGCVLAELLLGQPLFPGES 298
I G +D+WS G +L +L + F ES
Sbjct: 183 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 216
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 136/296 (45%), Gaps = 46/296 (15%)
Query: 88 KQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN----RELQTMRLLDH 143
++T +M V+G G+F VF K TG+ A+K + + +++ E+ ++ + H
Sbjct: 8 RKTFIFM--EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKH 65
Query: 144 PNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICR 203
N+V+L+ + STT YL + L E R+ + + L+ Q+
Sbjct: 66 ENIVTLEDIYESTT---HYYLVMQLVSGGELFDRILERGVYTEKDASLV-----IQQVLS 117
Query: 204 ALAYIHGGIGVCHRDIKPQNLL-VNPHTH-QVKLCDFGSAKVLVKGEPNISYICSR-YYR 260
A+ Y+H G+ HRD+KP+NLL + P + ++ + DFG +K+ G +S C Y
Sbjct: 118 AVKYLHEN-GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG--IMSTACGTPGYV 174
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 320
APE + Y+ A+D WS+G + LL G P F E+ +L E IK
Sbjct: 175 APE-VLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE-SKLFEKIK------------ 220
Query: 321 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
Y EF+ P F + A D + LL+ PN R T +A HP+
Sbjct: 221 --EGYYEFESP----------FWDDISESAKDFICHLLEKDPNERYTCEKALSHPW 264
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 128/314 (40%), Gaps = 67/314 (21%)
Query: 83 RNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR--------- 133
R + K SY R +G G++G V K AIK + + + K R
Sbjct: 28 RKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIE 87
Query: 134 --------ELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEF------VPETVYRVA 179
E+ ++ LDHPN++ L F +D+ Y LV EF + + R
Sbjct: 88 KFHEEIYNEISLLKSLDHPNIIKLFDVF-----EDKKYFYLVTEFYEGGELFEQIINRHK 142
Query: 180 KHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTH--QVKLCD 237
A+ M QI + Y+H + HRDIKP+N+L+ +K+ D
Sbjct: 143 FDECDAANIMK---------QILSGICYLHKH-NIVHRDIKPENILLENKNSLLNIKIVD 192
Query: 238 FGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGE 297
FG + K + + YY APE++ +Y D+WS G ++ LL G P F G+
Sbjct: 193 FGLSSFFSKDYKLRDRLGTAYYIAPEVL--KKKYNEKCDVWSCGVIMYILLCGYPPFGGQ 250
Query: 298 SGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 357
+ D + ++ K Y +F + W K + EA +L+ +
Sbjct: 251 NDQDIIKKVEK-------------GKYYFDF-------NDW-----KNISDEAKELIKLM 285
Query: 358 LQYSPNLRCTALEA 371
L Y N RCTA EA
Sbjct: 286 LTYDYNKRCTAEEA 299
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 113/229 (49%), Gaps = 17/229 (7%)
Query: 81 GGRN-GQPKQTIS--YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE--- 134
GGR+ P QT M ER+ G G FG V + +TGE VAIK+ Q+ KNRE
Sbjct: 2 GGRSPSLPTQTCGPWEMKERL-GTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWC 60
Query: 135 --LQTMRLLDHPNVVSLKHC--FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMP 190
+Q M+ L+HPNVVS + ++L L L +E+ R + +
Sbjct: 61 LEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPL-LAMEYCEGGDLRKYLNQFENCCGLK 119
Query: 191 LIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQV--KLCDFGSAKVLVKGE 248
++ I AL Y+H + HRD+KP+N+++ P ++ K+ D G AK L +GE
Sbjct: 120 EGPIRTLLSDISSALRYLHEN-RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE 178
Query: 249 PNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLG-QPLFPG 296
++ + Y APEL+ +YT +D WS G + E + G +P P
Sbjct: 179 LCTEFVGTLQYLAPELL-EQKKYTVTVDYWSFGTLAFECITGFRPFLPN 226
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 22/205 (10%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-------RELQTMRLLDHPNVVSL 149
R +G GSFG V+ A+ + E VAIKK+ + N +E++ ++ L HPN +
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
+ C+ E LV+E+ + + + + + Q + + V T+ + LAY+H
Sbjct: 120 RGCYLR-----EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAV---THGALQGLAYLH 171
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGAT 269
+ HRD+K N+L++ VKL DFGSA ++ P ++ + Y+ APE+I
Sbjct: 172 SH-NMIHRDVKAGNILLS-EPGLVKLGDFGSASIMA---PANXFVGTPYWMAPEVILAMD 226
Query: 270 E--YTTAIDIWSVGCVLAELLLGQP 292
E Y +D+WS+G EL +P
Sbjct: 227 EGQYDGKVDVWSLGITCIELAERKP 251
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 113/229 (49%), Gaps = 17/229 (7%)
Query: 81 GGRN-GQPKQTIS--YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE--- 134
GGR+ P QT M ER+ G G FG V + +TGE VAIK+ Q+ KNRE
Sbjct: 3 GGRSPSLPTQTCGPWEMKERL-GTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWC 61
Query: 135 --LQTMRLLDHPNVVSLKHC--FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMP 190
+Q M+ L+HPNVVS + ++L L L +E+ R + +
Sbjct: 62 LEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPL-LAMEYCEGGDLRKYLNQFENCCGLK 120
Query: 191 LIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQV--KLCDFGSAKVLVKGE 248
++ I AL Y+H + HRD+KP+N+++ P ++ K+ D G AK L +GE
Sbjct: 121 EGPIRTLLSDISSALRYLHEN-RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE 179
Query: 249 PNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLG-QPLFPG 296
++ + Y APEL+ +YT +D WS G + E + G +P P
Sbjct: 180 LCTEFVGTLQYLAPELL-EQKKYTVTVDYWSFGTLAFECITGFRPFLPN 227
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 117/230 (50%), Gaps = 26/230 (11%)
Query: 97 RVVGQGSFGIVFQAKCL---ETGETVAIKKV------LQDKRYKNRELQTMRLLDHPNVV 147
+V+GQGSFG VF + + ++G A+K + ++D+ E + ++HP VV
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIY--VKLYTYQICRAL 205
L + F + E L L+L+F+ R ++R S+ + VK Y ++ L
Sbjct: 94 KLHYAF-----QTEGKLYLILDFL-----RGGDLFTRLSKEVMFTEEDVKFYLAELALGL 143
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-YRAPEL 264
++H +G+ +RD+KP+N+L++ H +KL DFG +K + E C Y APE+
Sbjct: 144 DHLHS-LGIIYRDLKPENILLDEEGH-IKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEV 201
Query: 265 IFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKV-LGTP 313
+ ++ + D WS G ++ E+L G F G+ + + I+K LG P
Sbjct: 202 V-NRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMP 250
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 22/205 (10%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-------RELQTMRLLDHPNVVSL 149
R +G GSFG V+ A+ + E VAIKK+ + N +E++ ++ L HPN +
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
+ C+ E LV+E+ + + + + + Q + + V T+ + LAY+H
Sbjct: 81 RGCYLR-----EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAV---THGALQGLAYLH 132
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGAT 269
+ HRD+K N+L++ VKL DFGSA ++ P ++ + Y+ APE+I
Sbjct: 133 SH-NMIHRDVKAGNILLS-EPGLVKLGDFGSASIMA---PANXFVGTPYWMAPEVILAMD 187
Query: 270 E--YTTAIDIWSVGCVLAELLLGQP 292
E Y +D+WS+G EL +P
Sbjct: 188 EGQYDGKVDVWSLGITCIELAERKP 212
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 108/218 (49%), Gaps = 20/218 (9%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 32 NPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLY 197
R+L N L FS D LY +V+E+VP + H R R + + Y
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY--MVMEYVPGG--EMFSHLRRIG-RFSEPHARFY 146
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
QI Y+H + + +RD+KP+NLL++ + +K+ DFG AK VKG +C
Sbjct: 147 AAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IKVADFGFAK-RVKGR--TWXLCGT 201
Query: 258 -YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 115/222 (51%), Gaps = 25/222 (11%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQ-TM---RLL----DHPNVVS 148
RV+G+GSFG V A+ ETG+ A+K + +D ++ +++ TM R+L +HP +
Sbjct: 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ 88
Query: 149 LKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALA 206
L C F T D+ L V+EFV + ++ + K S+R + Y +I AL
Sbjct: 89 L-FCCFQTPDR----LFFVMEFVNGGDLMFHIQK-----SRRFDEARARFYAAEIISALM 138
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKV-LVKGEPNISYICSRYYRAPELI 265
++H G+ +RD+K N+L++ H KL DFG K + G ++ + Y APE I
Sbjct: 139 FLHDK-GIIYRDLKLDNVLLD-HEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPE-I 195
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 307
Y A+D W++G +L E+L G F E+ D L E I
Sbjct: 196 LQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE-DDLFEAI 236
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 109/207 (52%), Gaps = 26/207 (12%)
Query: 97 RVVGQGSFGIV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVS 148
R +G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
K +S ++ L L++EF+P R ++ + +R+ I + YT QIC+ + Y+
Sbjct: 79 YKGVCYSAGRRN---LKLIMEFLPYGSLR--EYLQKHKERIDHIKLLQYTSQICKGMEYL 133
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRA 261
G HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ A
Sbjct: 134 -GTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYA 188
Query: 262 PELIFGATEYTTAIDIWSVGCVLAELL 288
PE + ++++ A D+WS G VL EL
Sbjct: 189 PESL-TESKFSVASDVWSFGVVLYELF 214
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 136/314 (43%), Gaps = 48/314 (15%)
Query: 74 HIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKV----LQDKR 129
H IVT + G + ++G G FG V + + TG +A K + ++DK
Sbjct: 75 HRIVT---AKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKE 131
Query: 130 YKNRELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQ 187
E+ M LDH N++ L F S D + LV+E+V E R+ ++
Sbjct: 132 EVKNEISVMNQLDHANLIQLYDAFESKND-----IVLVMEYVDGGELFDRIIDESYNLTE 186
Query: 188 RMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLL-VNPHTHQVKLCDFGSAKVLVK 246
++++K QIC + ++H + + H D+KP+N+L VN Q+K+ DFG A+
Sbjct: 187 LDTILFMK----QICEGIRHMH-QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP 241
Query: 247 GEPNISYICSRYYRAPELI-FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVE 305
E + + APE++ + + T D+WSVG + LL G F G++ + L
Sbjct: 242 REKLKVNFGTPEFLAPEVVNYDFVSFPT--DMWSVGVIAYMLLSGLSPFLGDNDAETLNN 299
Query: 306 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLR 365
I+ EE + + EA + +S+LL + R
Sbjct: 300 ILACRWDLEDEEF-------------------------QDISEEAKEFISKLLIKEKSWR 334
Query: 366 CTALEACIHPFFYE 379
+A EA HP+ +
Sbjct: 335 ISASEALKHPWLSD 348
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 134/308 (43%), Gaps = 51/308 (16%)
Query: 82 GRNGQPKQTISYMAERV--VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR------ 133
GR Q +S +RV +G G++G V K TG AIK + +
Sbjct: 10 GRENLYFQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALL 69
Query: 134 -ELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRA--SQRMP 190
E+ ++ LDHPN++ L F DK YL V+E VYR + + Q+
Sbjct: 70 DEVAVLKQLDHPNIMKLYEFF---EDKRNYYL--VME-----VYRGGELFDEIILRQKFS 119
Query: 191 LIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGE 248
+ + Q+ Y+H + HRD+KP+NLL+ + +K+ DFG + G
Sbjct: 120 EVDAAVIMKQVLSGTTYLHKH-NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG 178
Query: 249 PNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIK 308
+ + YY APE++ +Y D+WS G +L LL G P F G++ DQ +
Sbjct: 179 KMKERLGTAYYIAPEVL--RKKYDEKCDVWSCGVILYILLCGYPPFGGQT--DQ-----E 229
Query: 309 VLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTA 368
+L + + P++T+ + EA LV +L Y P+ R +A
Sbjct: 230 ILKRVEKGKFSFDPPDWTQ------------------VSDEAKQLVKLMLTYEPSKRISA 271
Query: 369 LEACIHPF 376
EA HP+
Sbjct: 272 EEALNHPW 279
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 115/218 (52%), Gaps = 24/218 (11%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQ-TM---RLL----DH 143
++ +++G+GSFG VF A+ +T + AIK + +D + +++ TM R+L +H
Sbjct: 18 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 77
Query: 144 PNVVSLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQI 201
P L H F + K+ L+ V+E++ + +Y + ++ + L Y +I
Sbjct: 78 P---FLTHMFCTFQTKENLFF--VMEYLNGGDLMYHI-----QSCHKFDLSRATFYAAEI 127
Query: 202 CRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYR 260
L ++H G+ +RD+K N+L++ H +K+ DFG K + G+ + C Y
Sbjct: 128 ILGLQFLHSK-GIVYRDLKLDNILLDKDGH-IKIADFGMCKENMLGDAKTNXFCGTPDYI 185
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGES 298
APE++ G +Y ++D WS G +L E+L+GQ F G+
Sbjct: 186 APEILLG-QKYNHSVDWWSFGVLLYEMLIGQSPFHGQD 222
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 135/322 (41%), Gaps = 50/322 (15%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQD-------KRYKNRELQTM 138
P+ YM R +G+G F ++ ++T E A K V + K + E+
Sbjct: 37 DPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH 96
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYT 198
+ LD+P+VV H FF +D+ ++ +VLE + H R + P + +
Sbjct: 97 KSLDNPHVVGF-HGFF----EDDDFVYVVLEICRRRSL-LELHKRRKAVTEP--EARYFM 148
Query: 199 YQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISYICSR 257
Q + + Y+H V HRD+K NL +N VK+ DFG A K+ GE + +
Sbjct: 149 RQTIQGVQYLHNN-RVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKTLCGTP 206
Query: 258 YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 317
Y APE + ++ +DIWS+GC+L LL+G+P F E
Sbjct: 207 NYIAPE-VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------E 243
Query: 318 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
C+ Y K + P H + P A L+ R+L P LR + E FF
Sbjct: 244 TSCLKETYIRIKKNEYSV-PRH------INPVASALIRRMLHADPTLRPSVAELLTDEFF 296
Query: 378 YELRDPNARLPNG-RPFPPLFN 398
P RLP PP F+
Sbjct: 297 TSGYAP-MRLPTSCLTVPPRFS 317
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 133/291 (45%), Gaps = 50/291 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDHPNVVSLKHC 152
+G+G+F +V + + G+ A K + +D + RE + RLL HPN+V L H
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL-HD 88
Query: 153 FFSTTDKDELYLNLVL--EFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
S L +LV E + V R ++YS A + QI A+ + H
Sbjct: 89 SISEEGHHYLIFDLVTGGELFEDIVAR--EYYSEADASHCI-------QQILEAVLHCHQ 139
Query: 211 GIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPN--ISYICSRYYRAPELIF 266
+GV HRD+KP+NLL+ VKL DFG A + V+GE + + Y +PE +
Sbjct: 140 -MGVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPE-VL 196
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
Y +D+W+ G +L LL+G P F E +L + IK
Sbjct: 197 RKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ-HRLYQQIKA----------------G 239
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
+ FP + W + PEA DL++++L +P+ R TA EA HP+
Sbjct: 240 AYDFPSPE---WDTV-----TPEAKDLINKMLTINPSKRITAAEALKHPWI 282
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 134/315 (42%), Gaps = 53/315 (16%)
Query: 79 TIGGRNGQPKQTISYMAERV---------VGQGSFGIVFQAKCLETGETVAIK----KVL 125
++ NG+ + AE + +G G+F V A+ TG+ A+K K L
Sbjct: 1 SMARENGESSSSWKKQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKAL 60
Query: 126 QDKRYK-NRELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYR-VAKHYS 183
+ K E+ +R + H N+V+L+ + S + LYL + L E R V K +
Sbjct: 61 KGKESSIENEIAVLRKIKHENIVALEDIYESP---NHLYLVMQLVSGGELFDRIVEKGFY 117
Query: 184 RASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKL--CDFGSA 241
LI Q+ A+ Y+H +G+ HRD+KP+NLL + K+ DFG +
Sbjct: 118 TEKDASTLIR------QVLDAVYYLHR-MGIVHRDLKPENLLYYSQDEESKIMISDFGLS 170
Query: 242 KVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVD 301
K+ KG+ + + Y APE + Y+ A+D WS+G + LL G P F E+
Sbjct: 171 KMEGKGDVMSTACGTPGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSK 229
Query: 302 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYS 361
+I+K EF P W I A D + L++
Sbjct: 230 LFEQILKA---------------EYEFDSPY-----WDDI-----SDSAKDFIRNLMEKD 264
Query: 362 PNLRCTALEACIHPF 376
PN R T +A HP+
Sbjct: 265 PNKRYTCEQAARHPW 279
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 134/322 (41%), Gaps = 50/322 (15%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQD-------KRYKNRELQTM 138
P+ YM R +G+G F ++ ++T E A K V + K + E+
Sbjct: 21 DPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH 80
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYT 198
+ LD+P+VV H FF +D+ ++ +VLE + H R + P + +
Sbjct: 81 KSLDNPHVVGF-HGFF----EDDDFVYVVLEICRRRSL-LELHKRRKAVTEP--EARYFM 132
Query: 199 YQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISYICSR 257
Q + + Y+H V HRD+K NL +N VK+ DFG A K+ GE +
Sbjct: 133 RQTIQGVQYLHNN-RVIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDGERKKDLCGTP 190
Query: 258 YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 317
Y APE + ++ +DIWS+GC+L LL+G+P F E
Sbjct: 191 NYIAPE-VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------E 227
Query: 318 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
C+ Y K + P H + P A L+ R+L P LR + E FF
Sbjct: 228 TSCLKETYIRIKKNEYSV-PRH------INPVASALIRRMLHADPTLRPSVAELLTDEFF 280
Query: 378 YELRDPNARLPNG-RPFPPLFN 398
P RLP PP F+
Sbjct: 281 TSGYAP-MRLPTSCLTVPPRFS 301
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 134/322 (41%), Gaps = 50/322 (15%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQD-------KRYKNRELQTM 138
P+ YM R +G+G F ++ ++T E A K V + K + E+
Sbjct: 37 DPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH 96
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYT 198
+ LD+P+VV H FF +D+ ++ +VLE + H R + P + +
Sbjct: 97 KSLDNPHVVGF-HGFF----EDDDFVYVVLEICRRRSL-LELHKRRKAVTEP--EARYFM 148
Query: 199 YQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISYICSR 257
Q + + Y+H V HRD+K NL +N VK+ DFG A K+ GE +
Sbjct: 149 RQTIQGVQYLHNN-RVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKDLCGTP 206
Query: 258 YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 317
Y APE + ++ +DIWS+GC+L LL+G+P F E
Sbjct: 207 NYIAPE-VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------E 243
Query: 318 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
C+ Y K + P H + P A L+ R+L P LR + E FF
Sbjct: 244 TSCLKETYIRIKKNEYSV-PRH------INPVASALIRRMLHADPTLRPSVAELLTDEFF 296
Query: 378 YELRDPNARLPNG-RPFPPLFN 398
P RLP PP F+
Sbjct: 297 TSGYAP-MRLPTSCLTVPPRFS 317
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 150/314 (47%), Gaps = 64/314 (20%)
Query: 94 MAERVVGQGSFG-IVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL----DHPNVVS 148
++E+++G GS G +VFQ G VA+K++L D + + L ++LL DHPNV+
Sbjct: 36 VSEKILGYGSSGTVVFQGSF--QGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVI- 90
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYT-----YQICR 203
++ TTD+ +L + LE + + + + + + + L K Y QI
Sbjct: 91 -RYYCSETTDR---FLYIALELCNLNLQDLVESKNVSDENLKL--QKEYNPISLLRQIAS 144
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTH------------QVKLCDFGSAKVLVKGEPNI 251
+A++H + + HRD+KPQN+LV+ + ++ + DFG K L G+
Sbjct: 145 GVAHLHS-LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 252 SYIC-----SRYYRAPELIFGATE--YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV 304
+ +RAPEL+ +T+ T +IDI+S+GCV +L + P +
Sbjct: 204 RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKYSRES 262
Query: 305 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNL 364
II+ G + +E+KC++ + + EA DL+S+++ + P
Sbjct: 263 NIIR--GIFSLDEMKCLH--------------------DRSLIAEATDLISQMIDHDPLK 300
Query: 365 RCTALEACIHPFFY 378
R TA++ HP F+
Sbjct: 301 RPTAMKVLRHPLFW 314
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 140/320 (43%), Gaps = 50/320 (15%)
Query: 99 VGQGSFGIVFQAKCLETG---ETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS 155
+G+G+FG V +CL+ VA+K + +Y+ + +L ++ F
Sbjct: 27 LGEGTFGKV--VECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLC 84
Query: 156 TTDKDEL----YLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGG 211
D ++ + E + + + K Q PL +V+ YQ+C AL ++H
Sbjct: 85 VLMSDWFNFHGHMCIAFELLGKNTFEFLK--ENNFQPYPLPHVRHMAYQLCHALRFLHEN 142
Query: 212 IGVCHRDIKPQNLLV---------NPHTH---------QVKLCDFGSAKVLVKGEPNISY 253
+ H D+KP+N+L N H +++ DFGSA E + +
Sbjct: 143 -QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--DHEHHTTI 199
Query: 254 ICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLG-- 311
+ +R+YR PE+I + D+WS+GC+L E G LF + LV + K+LG
Sbjct: 200 VATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPI 258
Query: 312 -----TPTREEIK------CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAV---DLVSRL 357
TR++ + N ++ ++ + P K + + E V DL+ R+
Sbjct: 259 PSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPL-KSYMLQDSLEHVQLFDLMRRM 317
Query: 358 LQYSPNLRCTALEACIHPFF 377
L++ P R T EA +HPFF
Sbjct: 318 LEFDPAQRITLAEALLHPFF 337
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 140/320 (43%), Gaps = 50/320 (15%)
Query: 99 VGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS 155
+G+G+FG V +CL+ VA+K + +Y+ + +L ++ F
Sbjct: 36 LGEGTFGKV--VECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLC 93
Query: 156 TTDKDEL----YLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGG 211
D ++ + E + + + K Q PL +V+ YQ+C AL ++H
Sbjct: 94 VLMSDWFNFHGHMCIAFELLGKNTFEFLK--ENNFQPYPLPHVRHMAYQLCHALRFLHEN 151
Query: 212 IGVCHRDIKPQNLLV---------NPHTH---------QVKLCDFGSAKVLVKGEPNISY 253
+ H D+KP+N+L N H +++ DFGSA E + +
Sbjct: 152 -QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--DHEHHTTI 208
Query: 254 ICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLG-- 311
+ +R+YR PE+I + D+WS+GC+L E G LF + LV + K+LG
Sbjct: 209 VATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPI 267
Query: 312 -----TPTREEIK------CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAV---DLVSRL 357
TR++ + N ++ ++ + P K + + E V DL+ R+
Sbjct: 268 PSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPL-KSYMLQDSLEHVQLFDLMRRM 326
Query: 358 LQYSPNLRCTALEACIHPFF 377
L++ P R T EA +HPFF
Sbjct: 327 LEFDPAQRITLAEALLHPFF 346
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 140/320 (43%), Gaps = 50/320 (15%)
Query: 99 VGQGSFGIVFQAKCLETG---ETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS 155
+G+G+FG V +CL+ VA+K + +Y+ + +L ++ F
Sbjct: 59 LGEGTFGKV--VECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLC 116
Query: 156 TTDKDEL----YLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGG 211
D ++ + E + + + K Q PL +V+ YQ+C AL ++H
Sbjct: 117 VLMSDWFNFHGHMCIAFELLGKNTFEFLK--ENNFQPYPLPHVRHMAYQLCHALRFLHEN 174
Query: 212 IGVCHRDIKPQNLLV---------NPHTH---------QVKLCDFGSAKVLVKGEPNISY 253
+ H D+KP+N+L N H +++ DFGSA E + +
Sbjct: 175 -QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--DHEHHTTI 231
Query: 254 ICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLG-- 311
+ +R+YR PE+I + D+WS+GC+L E G LF + LV + K+LG
Sbjct: 232 VATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPI 290
Query: 312 -----TPTREEIK------CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAV---DLVSRL 357
TR++ + N ++ ++ + P K + + E V DL+ R+
Sbjct: 291 PSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPL-KSYMLQDSLEHVQLFDLMRRM 349
Query: 358 LQYSPNLRCTALEACIHPFF 377
L++ P R T EA +HPFF
Sbjct: 350 LEFDPAQRITLAEALLHPFF 369
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 150/314 (47%), Gaps = 64/314 (20%)
Query: 94 MAERVVGQGSFG-IVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL----DHPNVVS 148
++E+++G GS G +VFQ G VA+K++L D + + L ++LL DHPNV+
Sbjct: 36 VSEKILGYGSSGTVVFQGSF--QGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVI- 90
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYT-----YQICR 203
++ TTD+ +L + LE + + + + + + + L K Y QI
Sbjct: 91 -RYYCSETTDR---FLYIALELCNLNLQDLVESKNVSDENLKL--QKEYNPISLLRQIAS 144
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTH------------QVKLCDFGSAKVLVKGEPNI 251
+A++H + + HRD+KPQN+LV+ + ++ + DFG K L G+
Sbjct: 145 GVAHLHS-LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 252 SYIC-----SRYYRAPELIFGATE--YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLV 304
+ +RAPEL+ +T+ T +IDI+S+GCV +L + P +
Sbjct: 204 RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKYSRES 262
Query: 305 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNL 364
II+ G + +E+KC++ + + EA DL+S+++ + P
Sbjct: 263 NIIR--GIFSLDEMKCLH--------------------DRSLIAEATDLISQMIDHDPLK 300
Query: 365 RCTALEACIHPFFY 378
R TA++ HP F+
Sbjct: 301 RPTAMKVLRHPLFW 314
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 134/322 (41%), Gaps = 50/322 (15%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQD-------KRYKNRELQTM 138
P+ YM R +G+G F ++ ++T E A K V + K + E+
Sbjct: 37 DPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH 96
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYT 198
+ LD+P+VV H FF +D+ ++ +VLE + H R + P + +
Sbjct: 97 KSLDNPHVVGF-HGFF----EDDDFVYVVLEICRRRSL-LELHKRRKAVTEP--EARYFM 148
Query: 199 YQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISYICSR 257
Q + + Y+H V HRD+K NL +N VK+ DFG A K+ GE +
Sbjct: 149 RQTIQGVQYLHNN-RVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKXLCGTP 206
Query: 258 YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 317
Y APE + ++ +DIWS+GC+L LL+G+P F E
Sbjct: 207 NYIAPE-VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------E 243
Query: 318 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
C+ Y K + P H + P A L+ R+L P LR + E FF
Sbjct: 244 TSCLKETYIRIKKNEYSV-PRH------INPVASALIRRMLHADPTLRPSVAELLTDEFF 296
Query: 378 YELRDPNARLPNG-RPFPPLFN 398
P RLP PP F+
Sbjct: 297 TSGYAP-MRLPTSCLTVPPRFS 317
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 20/218 (9%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 32 NPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLY 197
R+L N L FS D LY +V+E++P + H R R + + Y
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY--MVMEYMPGG--DMFSHLRRIG-RFSEPHARFY 146
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
QI Y+H + + +RD+KP+NLL++ + +K+ DFG AK VKG +C
Sbjct: 147 AAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IKVADFGFAK-RVKGR--TWXLCGT 201
Query: 258 -YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 20/218 (9%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 32 NPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLY 197
R+L N L FS D LY +V+E++P + H R R + + Y
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY--MVMEYMPGG--DMFSHLRRIG-RFSEPHARFY 146
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
QI Y+H + + +RD+KP+NLL++ + +K+ DFG AK VKG +C
Sbjct: 147 AAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IKVADFGFAK-RVKGR--TWXLCGT 201
Query: 258 -YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 128/295 (43%), Gaps = 49/295 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR-------ELQTMRLLDHPN 145
Y + +G G++G V K TG AIK + + E+ ++ LDHPN
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 65
Query: 146 VVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRA--SQRMPLIYVKLYTYQICR 203
++ L F DK YL V+E VYR + + Q+ + + Q+
Sbjct: 66 IMKLYEFF---EDKRNYYL--VME-----VYRGGELFDEIILRQKFSEVDAAVIMKQVLS 115
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRA 261
Y+H + HRD+KP+NLL+ + +K+ DFG + G + + YY A
Sbjct: 116 GTTYLHKH-NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIA 174
Query: 262 PELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 321
PE++ +Y D+WS G +L LL G P F G++ DQ ++L + +
Sbjct: 175 PEVL--RKKYDEKCDVWSCGVILYILLCGYPPFGGQT--DQ-----EILKRVEKGKFSFD 225
Query: 322 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
P++T+ + EA LV +L Y P+ R +A EA HP+
Sbjct: 226 PPDWTQ------------------VSDEAKQLVKLMLTYEPSKRISAEEALNHPW 262
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 18/212 (8%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-------RELQTMRLLDHPN 145
Y+ +G+GSFG V A +T + VA+K + + K+ RE+ ++LL HP+
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 146 VVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
++ L + TD + +V+E+ ++ Y +RM + + QI A+
Sbjct: 71 IIKLYDVITTPTD-----IVMVIEYAGGELF----DYIVEKKRMTEDEGRRFFQQIICAI 121
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
Y H + HRD+KP+NLL++ + + VK+ DFG + ++ G + S Y APE+I
Sbjct: 122 EYCHRH-KIVHRDLKPENLLLDDNLN-VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 179
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGE 297
G +D+WS G VL +L+G+ F E
Sbjct: 180 NGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDE 211
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K +E L
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNE 91
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLY 197
R+L N L FS D LY +V+E+ P + H R R + + Y
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY--MVMEYAPGG--EMFSHLRRIG-RFSEPHARFY 146
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
QI Y+H + + +RD+KP+NL+++ + +K+ DFG AK VKG +C
Sbjct: 147 AAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IKVTDFGLAK-RVKGR--TWXLCGT 201
Query: 258 -YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 20/218 (9%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 33 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLY 197
R+L N L FS D LY +V+E+VP + H R R + + Y
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLY--MVMEYVPGG--EMFSHLRRIG-RFSEPHARFY 147
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
QI Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 148 AAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGT 202
Query: 258 -YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 203 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 20/218 (9%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLY 197
R+L N L FS D LY +V+E+VP + H R R + + Y
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY--MVMEYVPGG--EMFSHLRRIG-RFSEPHARFY 146
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
QI Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 147 AAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGT 201
Query: 258 -YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 135/300 (45%), Gaps = 50/300 (16%)
Query: 90 TISYMAERVVGQGSFGIVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDH 143
T Y +G+G+F +V + + TG+ A K + +D + RE + RLL H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 144 PNVVSLKHCFFSTTDKDELYLNLVL--EFVPETVYRVAKHYSRASQRMPLIYVKLYTYQI 201
PN+V L H S L +LV E + V R ++YS A + QI
Sbjct: 63 PNIVRL-HDSISEEGFHYLVFDLVTGGELFEDIVAR--EYYSEADASHCI-------QQI 112
Query: 202 CRALAYIHGGIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPN--ISYICSR 257
++ + H G+ HRD+KP+NLL+ + VKL DFG A + V+G+ + +
Sbjct: 113 LESVNHCHLN-GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTP 170
Query: 258 YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 317
Y +PE + Y +D+W+ G +L LL+G P F E +L + IK
Sbjct: 171 GYLSPE-VLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQ-HRLYQQIKA-------- 220
Query: 318 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
+ FP + W + PEA DL++++L +P R TA EA HP+
Sbjct: 221 --------GAYDFPSPE---WDTV-----TPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 20/218 (9%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLY 197
R+L N L FS D LY +V+E+VP + H R R + + Y
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY--MVMEYVPGG--EMFSHLRRIG-RFSEPHARFY 146
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
QI Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 147 AAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGT 201
Query: 258 -YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 130/293 (44%), Gaps = 46/293 (15%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVA-----IKKVLQDKRYKNRELQTMRLLDHPNVV 147
YM +G+G FGIV +C+ET +K D+ +E+ + + H N++
Sbjct: 7 YMIAEDLGRGEFGIVH--RCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNIL 64
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
L F S + L ++ EF+ + R+ ++R + YV +Q+C AL
Sbjct: 65 HLHESFESMEE-----LVMIFEFISGLDIFERINTSAFELNEREIVSYV----HQVCEAL 115
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPH-THQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 264
++H + H DI+P+N++ + +K+ +FG A+ L G+ + Y APE
Sbjct: 116 QFLHSH-NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPE- 173
Query: 265 IFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 324
+ +TA D+WS+G ++ LL G F E+ Q++E I MN
Sbjct: 174 VHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN-QQIIENI-------------MNAE 219
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
YT + + K + EA+D V RLL R TA EA HP+
Sbjct: 220 YT-----------FDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWL 261
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 20/218 (9%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLY 197
R+L N L FS D LY +V+E+VP + H R R + + Y
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY--MVMEYVPGG--EMFSHLRRIG-RFSEPHARFY 146
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
QI Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 147 AAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGT 201
Query: 258 -YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 113/213 (53%), Gaps = 24/213 (11%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQ-TM---RLL----DHPNVVS 148
+++G+GSFG VF A+ +T + AIK + +D + +++ TM R+L +HP
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP---F 80
Query: 149 LKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALA 206
L H F + K+ L+ V+E++ + +Y + ++ + L Y +I L
Sbjct: 81 LTHMFCTFQTKENLFF--VMEYLNGGDLMYHI-----QSCHKFDLSRATFYAAEIILGLQ 133
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELI 265
++H G+ +RD+K N+L++ H +K+ DFG K + G+ + C Y APE++
Sbjct: 134 FLHSK-GIVYRDLKLDNILLDKDGH-IKIADFGMCKENMLGDAKTNEFCGTPDYIAPEIL 191
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGES 298
G +Y ++D WS G +L E+L+GQ F G+
Sbjct: 192 LG-QKYNHSVDWWSFGVLLYEMLIGQSPFHGQD 223
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 108/217 (49%), Gaps = 18/217 (8%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 33 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLY 197
R+L N L FS D LY +V+E+VP + H R R + + Y
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLY--MVMEYVPGG--EMFSHLRRIG-RFSEPHARFY 147
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
QI Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG + +
Sbjct: 148 AAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR-TWTLCGTP 203
Query: 258 YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 33 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLY 197
R+L N L FS D LY +V+E+ P + H R R + + Y
Sbjct: 93 KRILQAVNFPFLTKLEFSFKDNSNLY--MVMEYAPGG--EMFSHLRRIG-RFSEPHARFY 147
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
QI Y+H + + +RD+KP+NL+++ + +K+ DFG AK VKG +C
Sbjct: 148 AAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGR--TWXLCGT 202
Query: 258 -YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 203 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 33 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLY 197
R+L N L FS D LY +V+E+ P + H R R + + Y
Sbjct: 93 KRILQAVNFPFLTKLEFSFKDNSNLY--MVMEYAPGG--EMFSHLRRIG-RFSEPHARFY 147
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
QI Y+H + + +RD+KP+NL+++ + +K+ DFG AK VKG +C
Sbjct: 148 AAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGR--TWXLCGT 202
Query: 258 -YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 203 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 20/218 (9%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 33 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLY 197
R+L N L FS D LY +V+E+VP + H R R + + Y
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLY--MVMEYVPGG--EMFSHLRRIG-RFXEPHARFY 147
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
QI Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 148 AAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGT 202
Query: 258 -YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 203 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 108/217 (49%), Gaps = 18/217 (8%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 18 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 77
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLY 197
R+L N L FS D LY +V+E+VP + H R R + + Y
Sbjct: 78 KRILQAVNFPFLVKLEFSFKDNSNLY--MVMEYVPGG--EMFSHLRRIG-RFSEPHARFY 132
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
QI Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG + +
Sbjct: 133 AAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR-TWTLCGTP 188
Query: 258 YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 189 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 20/218 (9%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLY 197
R+L N L FS D LY +V+E+VP + H R R + + Y
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY--MVMEYVPGG--EMFSHLRRIG-RFXEPHARFY 146
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
QI Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 147 AAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGT 201
Query: 258 -YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 20/218 (9%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLY 197
R+L N L FS D LY +V+E+VP + H R R + + Y
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY--MVMEYVPGG--EMFSHLRRIG-RFXEPHARFY 146
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
QI Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 147 AAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGT 201
Query: 258 -YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 105/205 (51%), Gaps = 28/205 (13%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSL 149
R +G GSFG V + G A+K + L+ + N E + ++ HP ++ +
Sbjct: 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM 71
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYS--RASQRMPLIYVKLYTYQICRALAY 207
F +D + ++++++ + +S R SQR P K Y ++C AL Y
Sbjct: 72 WGTF-----QDAQQIFMIMDYI-----EGGELFSLLRKSQRFPNPVAKFYAAEVCLALEY 121
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY-ICSR-YYRAPELI 265
+H + +RD+KP+N+L++ + H +K+ DFG AK + P+++Y +C Y APE++
Sbjct: 122 LHSK-DIIYRDLKPENILLDKNGH-IKITDFGFAKYV----PDVTYXLCGTPDYIAPEVV 175
Query: 266 FGATEYTTAIDIWSVGCVLAELLLG 290
Y +ID WS G ++ E+L G
Sbjct: 176 -STKPYNKSIDWWSFGILIYEMLAG 199
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 135/300 (45%), Gaps = 50/300 (16%)
Query: 90 TISYMAERVVGQGSFGIVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDH 143
T Y +G+G+F +V + + TG+ A K + +D + RE + RLL H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 144 PNVVSLKHCFFSTTDKDELYLNLVL--EFVPETVYRVAKHYSRASQRMPLIYVKLYTYQI 201
PN+V L H S L +LV E + V R ++YS A + QI
Sbjct: 63 PNIVRL-HDSISEEGFHYLVFDLVTGGELFEDIVAR--EYYSEADASHCI-------QQI 112
Query: 202 CRALAYIHGGIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPN--ISYICSR 257
++ + H G+ HRD+KP+NLL+ + VKL DFG A + V+G+ + +
Sbjct: 113 LESVNHCHLN-GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTP 170
Query: 258 YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 317
Y +PE + Y +D+W+ G +L LL+G P F E +L + IK
Sbjct: 171 GYLSPE-VLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQ-HRLYQQIKA-------- 220
Query: 318 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
+ FP + W + PEA DL++++L +P R TA EA HP+
Sbjct: 221 --------GAYDFPSPE---WDTV-----TPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 110/206 (53%), Gaps = 28/206 (13%)
Query: 99 VGQGSFGIV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 150
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 151 HCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRA-SQRMPLIYVKLYTYQICRALAYIH 209
+S ++ L L++E++P Y + Y +A ++R+ I + YT QIC+ + Y+
Sbjct: 81 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL- 133
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAP 262
G HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ AP
Sbjct: 134 GTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAP 189
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELL 288
E + ++++ A D+WS G VL EL
Sbjct: 190 ESL-TESKFSVASDVWSFGVVLYELF 214
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 112/221 (50%), Gaps = 25/221 (11%)
Query: 85 GQPKQTISYMAERV-VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR------ELQT 137
G P++ Y+A + +G+GS GIV A TG+ VA+KK+ D R + R E+
Sbjct: 41 GDPRE---YLANFIKIGEGSTGIVCIATEKHTGKQVAVKKM--DLRKQQRRELLFNEVVI 95
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLY 197
MR H NVV + + DEL++ V+EF+ ++R ++ +
Sbjct: 96 MRDYHHDNVVDMYSSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IATV 146
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
+ RAL+Y+H GV HRDIK ++L+ ++KL DFG + K P +
Sbjct: 147 CLSVLRALSYLHNQ-GVIHRDIKSDSILLTSDG-RIKLSDFGFCAQVSKEVPKRKXLVGT 204
Query: 258 -YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGE 297
Y+ APE+I Y T +DIWS+G ++ E++ G+P + E
Sbjct: 205 PYWMAPEVI-SRLPYGTEVDIWSLGIMVIEMIDGEPPYFNE 244
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 33 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLY 197
R+L N L FS D LY +V+E+ P + H R R + + Y
Sbjct: 93 KRILQAVNFPFLTKLEFSFKDNSNLY--MVMEYAPGG--EMFSHLRRIG-RFXEPHARFY 147
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
QI Y+H + + +RD+KP+NL+++ + +K+ DFG AK VKG +C
Sbjct: 148 AAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGR--TWXLCGT 202
Query: 258 -YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 203 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDH 143
+Y ++ +G+G+F V A+ + TG VA+K + DK N RE++ M++L+H
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKII--DKTQLNPTSLQKLFREVRIMKILNH 73
Query: 144 PNVVSLKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQIC 202
PN+V L + E L LV+E+ V+ Y A RM + QI
Sbjct: 74 PNIVKLFEVI-----ETEKTLYLVMEYASGGEVF----DYLVAHGRMKEKEARAKFRQIV 124
Query: 203 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
A+ Y H + HRD+K +NLL++ + +K+ DFG + G ++ S Y AP
Sbjct: 125 SAVQYCHQKY-IVHRDLKAENLLLDGDMN-IKIADFGFSNEFTVGNKLDTFCGSPPYAAP 182
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGES 298
EL G +D+WS+G +L L+ G F G++
Sbjct: 183 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 26/205 (12%)
Query: 99 VGQGSFGIV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 150
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 151 HCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
+S ++ L L++E++P R + + +R+ I + YT QIC+ + Y+ G
Sbjct: 85 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYL-G 138
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 263
HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 139 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 194
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
+ ++++ A D+WS G VL EL
Sbjct: 195 SL-TESKFSVASDVWSFGVVLYELF 218
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLY 197
R+L N L FS D LY +V+E+ P + H R R + + Y
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY--MVMEYAPGG--EMFSHLRRIG-RFSEPHARFY 146
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
QI Y+H + + +RD+KP+NL+++ + +K+ DFG AK VKG +C
Sbjct: 147 AAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGR--TWXLCGT 201
Query: 258 -YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 26/205 (12%)
Query: 99 VGQGSFGIV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 150
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 151 HCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
+S ++ L L++E++P R + + +R+ I + YT QIC+ + Y+ G
Sbjct: 109 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYL-G 162
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 263
HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 163 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 218
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
+ ++++ A D+WS G VL EL
Sbjct: 219 SL-TESKFSVASDVWSFGVVLYELF 242
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 135/283 (47%), Gaps = 44/283 (15%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKRYKN--RELQTMRLLDHPNVVSL 149
R +G+GSFG V + +T + A+K K ++ +N +ELQ M+ L+HP +V+L
Sbjct: 21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL 80
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAK--HYSRASQRMPLIYVKLYTYQICRALAY 207
++S D++++++ + L + Y + + H+ + VKL+ ++ AL Y
Sbjct: 81 ---WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEET-------VKLFICELVMALDY 130
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 267
+ + HRD+KP N+L++ H H V + DF A +L + + ++ Y APE+
Sbjct: 131 LQNQ-RIIHRDMKPDNILLDEHGH-VHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSS 188
Query: 268 --ATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP--------TREE 317
Y+ A+D WS+G ELL G+ + S EI+ T ++E
Sbjct: 189 RKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS-KEIVHTFETTVVTYPSAWSQEM 247
Query: 318 I----KCMNPN----YTEF----KFPQIKAHPWHKIFHKRMPP 348
+ K + PN +++ FP + W +F KR+ P
Sbjct: 248 VSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINWDAVFQKRLIP 290
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 23/215 (10%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDHP 144
Y+ +G G+FG V + TG VA+K +L ++ ++ RE+Q ++L HP
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVK-ILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 145 NVVSLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQIC 202
+++ L + TD +V+E+V E + KH R+ + + QI
Sbjct: 72 HIIKLYQVISTPTD-----FFMVMEYVSGGELFDYICKH-----GRVEEMEARRLFQQIL 121
Query: 203 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
A+ Y H + V HRD+KP+N+L++ H K+ DFG + ++ GE + S Y AP
Sbjct: 122 SAVDYCHRHM-VVHRDLKPENVLLDAHM-NAKIADFGLSNMMSDGEFLRTSCGSPNYAAP 179
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGE 297
E+I G +DIWS G +L LL G F E
Sbjct: 180 EVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE 214
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 26/205 (12%)
Query: 99 VGQGSFGIV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 150
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 151 HCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
+S ++ L L++E++P R + + +R+ I + YT QIC+ + Y+ G
Sbjct: 82 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYL-G 135
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 263
HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 136 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 191
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
+ ++++ A D+WS G VL EL
Sbjct: 192 SL-TESKFSVASDVWSFGVVLYELF 215
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K +E L
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNE 91
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLY 197
R+L N L FS D LY +V+E+ P + H R R + + Y
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY--MVMEYAPGG--EMFSHLRRIG-RFSEPHARFY 146
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
QI Y+H + + +RD+KP+NL+++ + +++ DFG AK VKG +C
Sbjct: 147 AAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IQVTDFGLAK-RVKGR--TWXLCGT 201
Query: 258 -YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 26/205 (12%)
Query: 99 VGQGSFGIV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 150
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 151 HCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
+S ++ L L++E++P R + + +R+ I + YT QIC+ + Y+ G
Sbjct: 84 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYL-G 137
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 263
HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 138 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 193
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
+ ++++ A D+WS G VL EL
Sbjct: 194 SL-TESKFSVASDVWSFGVVLYELF 217
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 134/297 (45%), Gaps = 47/297 (15%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR------ELQTMRLLDHPNVVSLKHC 152
+G+GS GIV A+ +G VA+K + D R + R E+ MR H NVV +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVK--MMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ +EL++ ++EF+ R ++ + + +ALAY+H
Sbjct: 111 YLVG---EELWV--LMEFLQGGALTDIVSQVRLNEEQ----IATVCEAVLQALAYLHAQ- 160
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 271
GV HRDIK ++L+ +VKL DFG + K P + Y+ APE+I + Y
Sbjct: 161 GVIHRDIKSDSILLTLDG-RVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVI-SRSLY 218
Query: 272 TTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFP 331
T +DIWS+G ++ E++ G+P + +S V + + ++ P P
Sbjct: 219 ATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM------------KRLRDSPP-------P 259
Query: 332 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNARLP 388
++K HK+ P D + R+L P R TA E HPF + P +P
Sbjct: 260 KLKNS--HKV-----SPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGLPECLVP 309
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 26/205 (12%)
Query: 99 VGQGSFGIV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 150
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 151 HCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
+S ++ L L++E++P R + + +R+ I + YT QIC+ + Y+ G
Sbjct: 83 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYL-G 136
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 263
HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 137 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 192
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
+ ++++ A D+WS G VL EL
Sbjct: 193 SL-TESKFSVASDVWSFGVVLYELF 216
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 26/205 (12%)
Query: 99 VGQGSFGIV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 150
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 151 HCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
+S ++ L L++E++P R + + +R+ I + YT QIC+ + Y+ G
Sbjct: 81 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYL-G 134
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 263
HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 135 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 190
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
+ ++++ A D+WS G VL EL
Sbjct: 191 SL-TESKFSVASDVWSFGVVLYELF 214
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 26/205 (12%)
Query: 99 VGQGSFGIV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 150
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 151 HCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
+S ++ L L++E++P R + + +R+ I + YT QIC+ + Y+ G
Sbjct: 78 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYL-G 131
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 263
HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 132 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 187
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
+ ++++ A D+WS G VL EL
Sbjct: 188 SL-TESKFSVASDVWSFGVVLYELF 211
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 124/289 (42%), Gaps = 43/289 (14%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVL------QDKRYKNRELQTMRLLDHPNVVSLKHC 152
+G+G++G+V + + + +G+ A+K++ + KR + R +D P V+
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
F D + + E ++ + K Q +P + I +AL ++H +
Sbjct: 102 LFREGD-----VWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 156
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-EPNISYICSRYYRAPELI---FGA 268
V HRD+KP N+L+N QVK CDFG + LV +I C + Y APE I
Sbjct: 157 SVIHRDVKPSNVLINA-LGQVKXCDFGISGYLVDDVAKDIDAGC-KPYXAPERINPELNQ 214
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
Y+ DIWS+G EL + + FP +S GTP ++
Sbjct: 215 KGYSVKSDIWSLGITXIELAILR--FPYDS-----------WGTPFQQ------------ 249
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
Q+ P ++ + E VD S+ L+ + R T E HPFF
Sbjct: 250 -LKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 26/205 (12%)
Query: 99 VGQGSFGIV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 150
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 151 HCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
+S ++ L L++E++P R + + +R+ I + YT QIC+ + Y+ G
Sbjct: 78 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYL-G 131
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 263
HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 132 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI---FWYAPE 187
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
+ ++++ A D+WS G VL EL
Sbjct: 188 SL-TESKFSVASDVWSFGVVLYELF 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 26/205 (12%)
Query: 99 VGQGSFGIV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 150
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 151 HCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
+S ++ L L++E++P R + + +R+ I + YT QIC+ + Y+ G
Sbjct: 76 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYL-G 129
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 263
HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 130 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 185
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
+ ++++ A D+WS G VL EL
Sbjct: 186 SL-TESKFSVASDVWSFGVVLYELF 209
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 26/205 (12%)
Query: 99 VGQGSFGIV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 150
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 151 HCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
+S ++ L L++E++P R + + +R+ I + YT QIC+ + Y+ G
Sbjct: 78 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYL-G 131
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 263
HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 132 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 187
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
+ ++++ A D+WS G VL EL
Sbjct: 188 SL-TESKFSVASDVWSFGVVLYELF 211
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 26/205 (12%)
Query: 99 VGQGSFGIV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 150
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 151 HCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
+S ++ L L++E++P R + + +R+ I + YT QIC+ + Y+ G
Sbjct: 96 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYL-G 149
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 263
HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 150 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 205
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
+ ++++ A D+WS G VL EL
Sbjct: 206 SL-TESKFSVASDVWSFGVVLYELF 229
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 26/205 (12%)
Query: 99 VGQGSFGIV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 150
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 151 HCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
+S ++ L L++E++P R + + +R+ I + YT QIC+ + Y+ G
Sbjct: 77 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYL-G 130
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 263
HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 131 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 186
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
+ ++++ A D+WS G VL EL
Sbjct: 187 SL-TESKFSVASDVWSFGVVLYELF 210
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 26/205 (12%)
Query: 99 VGQGSFGIV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 150
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 151 HCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
+S ++ L L++E++P R + + +R+ I + YT QIC+ + Y+ G
Sbjct: 96 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYL-G 149
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 263
HRD+ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 150 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 205
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
+ ++++ A D+WS G VL EL
Sbjct: 206 SL-TESKFSVASDVWSFGVVLYELF 229
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 23/215 (10%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDHP 144
Y+ +G G+FG V + TG VA+K +L ++ ++ RE+Q ++L HP
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVK-ILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 145 NVVSLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQIC 202
+++ L + TD +V+E+V E + KH R+ + + QI
Sbjct: 72 HIIKLYQVISTPTD-----FFMVMEYVSGGELFDYICKH-----GRVEEMEARRLFQQIL 121
Query: 203 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
A+ Y H + V HRD+KP+N+L++ H K+ DFG + ++ GE S Y AP
Sbjct: 122 SAVDYCHRHM-VVHRDLKPENVLLDAHM-NAKIADFGLSNMMSDGEFLRDSCGSPNYAAP 179
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGE 297
E+I G +DIWS G +L LL G F E
Sbjct: 180 EVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE 214
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLY 197
R+L N L FS D LY +V+E+ P + H R R + + Y
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY--MVMEYAPGG--EMFSHLRRIG-RFXEPHARFY 146
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
QI Y+H + + +RD+KP+NL+++ + +K+ DFG AK VKG +C
Sbjct: 147 AAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGR--TWXLCGT 201
Query: 258 -YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 138/326 (42%), Gaps = 50/326 (15%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK--NRELQTM-----RLLDHPNVVSLKH 151
+G+G F F+ +T E A K V + K RE +M R L H +VV H
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF-H 83
Query: 152 CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGG 211
FF D ++ +VLE + H R + P + Y QI Y+H
Sbjct: 84 GFFEDND----FVFVVLELCRRRSL-LELHKRRKALTEP--EARYYLRQIVLGCQYLHRN 136
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISYICSRYYRAPELIFGATE 270
V HRD+K NL +N +VK+ DFG A KV GE + + Y APE +
Sbjct: 137 -RVIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE-VLSKKG 193
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 330
++ +D+WS+GC++ LL+G+P F E C+ Y
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL---- 227
Query: 331 PQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNARLP-N 389
+IK + + K + P A L+ ++LQ P R T E FF P ARLP
Sbjct: 228 -RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP-ARLPIT 283
Query: 390 GRPFPPLFNFKPQELKGASKELLSKL 415
PP F+ P L ++++ L+ L
Sbjct: 284 CLTIPPXFSIAPSSLDPSNRKPLTVL 309
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 87 PKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 138
P Q +++ + + +G GSFG V K ETG A+K + + K K ++ L
Sbjct: 54 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 113
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYT 198
R+L N L FS D LY +V+E+VP + H R R + + Y
Sbjct: 114 RILQAVNFPFLVKLEFSFKDNSNLY--MVMEYVPGG--EMFSHLRRIG-RFSEPHARFYA 168
Query: 199 YQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 257
QI Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 169 AQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTP 223
Query: 258 YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 224 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 134/295 (45%), Gaps = 54/295 (18%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL---------- 141
+ R++G+G FG V+ + +TG+ A+K L KR K ++ +T+ L
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMK-CLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 142 -DHPNVVSLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKH--YSRASQRMPLIYVKL 196
D P +V + + F T DK L+ +L+ + + Y +++H +S A R
Sbjct: 249 GDCPFIVCMSYAF-HTPDK----LSFILDLMNGGDLHYHLSQHGVFSEADMR-------F 296
Query: 197 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 256
Y +I L ++H V +RD+KP N+L++ H H V++ D G A K +P+ S + +
Sbjct: 297 YAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGH-VRISDLGLACDFSKKKPHAS-VGT 353
Query: 257 RYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF-----PGESGVDQLVEIIKV-- 309
Y APE++ Y ++ D +S+GC+L +LL G F + +D++ + V
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVEL 413
Query: 310 ---------------LGTPTREEIKCMNPNYTEFK-FPQIKAHPWHKIFHKRMPP 348
L + C+ E K P ++ W +F ++ PP
Sbjct: 414 PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPP 468
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 109/204 (53%), Gaps = 20/204 (9%)
Query: 96 ERV--VGQGSFGIVFQAKCLETGETVAIKKVLQDKR--YKN---RELQTMRLLDHPNVVS 148
ER+ +G G+ G+V + + +G +A K + + + +N RELQ + + P +V
Sbjct: 19 ERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVG 78
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
F+S + +++ +E + ++ +V K ++R+P + + + R LAY
Sbjct: 79 FYGAFYSDGE-----ISICMEHMDGGSLDQVLKE----AKRIPEEILGKVSIAVLRGLAY 129
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 267
+ + HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y APE + G
Sbjct: 130 LREKHQIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYMAPERLQG 187
Query: 268 ATEYTTAIDIWSVGCVLAELLLGQ 291
T Y+ DIWS+G L EL +G+
Sbjct: 188 -THYSVQSDIWSMGLSLVELAVGR 210
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDH 143
+Y + +G+G+F V A+ + TG+ VA+K + DK N RE++ M++L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 144 PNVVSLKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQIC 202
PN+V L + E L LV+E+ V+ Y A RM + QI
Sbjct: 73 PNIVKLFEVI-----ETEKTLYLVMEYASGGEVF----DYLVAHGRMKEKEARAKFRQIV 123
Query: 203 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
A+ Y H + HRD+K +NLL++ + +K+ DFG + G ++ S Y AP
Sbjct: 124 SAVQYCHQKF-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCGSPPYAAP 181
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGES 298
EL G +D+WS+G +L L+ G F G++
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 133/290 (45%), Gaps = 50/290 (17%)
Query: 99 VGQGSFGIVFQ-AKCLETGETVAI-----KKVLQDKRYKNRELQTMRLLDHPNVVSLKHC 152
+G+G+F +V + K L E A+ K +D + RE + RLL HPN+V L H
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRL-HD 77
Query: 153 FFSTTDKDELYLNLVL--EFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
S L +LV E + V R ++YS A + QI A+ + H
Sbjct: 78 SISEEGHHYLIFDLVTGGELFEDIVAR--EYYSEADASHCI-------QQILEAVLHCHQ 128
Query: 211 GIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPN--ISYICSRYYRAPELIF 266
+GV HR++KP+NLL+ VKL DFG A + V+GE + + Y +PE +
Sbjct: 129 -MGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPE-VL 185
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
Y +D+W+ G +L LL+G P F E +L + IK
Sbjct: 186 RKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ-HRLYQQIKA----------------G 228
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ FP + W + PEA DL++++L +P+ R TA EA HP+
Sbjct: 229 AYDFPSPE---WDTV-----TPEAKDLINKMLTINPSKRITAAEALKHPW 270
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 134/295 (45%), Gaps = 54/295 (18%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL---------- 141
+ R++G+G FG V+ + +TG+ A+K L KR K ++ +T+ L
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMK-CLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 142 -DHPNVVSLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKH--YSRASQRMPLIYVKL 196
D P +V + + F T DK L+ +L+ + + Y +++H +S A R
Sbjct: 248 GDCPFIVCMSYAF-HTPDK----LSFILDLMNGGDLHYHLSQHGVFSEADMR-------F 295
Query: 197 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 256
Y +I L ++H V +RD+KP N+L++ H H V++ D G A K +P+ S + +
Sbjct: 296 YAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGH-VRISDLGLACDFSKKKPHAS-VGT 352
Query: 257 RYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF-----PGESGVDQLVEIIKV-- 309
Y APE++ Y ++ D +S+GC+L +LL G F + +D++ + V
Sbjct: 353 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVEL 412
Query: 310 ---------------LGTPTREEIKCMNPNYTEFK-FPQIKAHPWHKIFHKRMPP 348
L + C+ E K P ++ W +F ++ PP
Sbjct: 413 PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPP 467
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 87 PKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 138
P Q +++ + + +G GSFG V K ETG A+K + + K K ++ L
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYT 198
R+L N L FS D LY +V+E+VP + H R R + + Y
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLY--MVMEYVPGG--EMFSHLRRIG-RFSEPHARFYA 148
Query: 199 YQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 257
QI Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 149 AQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTP 203
Query: 258 YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 112/221 (50%), Gaps = 26/221 (11%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQ----- 136
P Q +++ + + +G GSFG V K ETG A+K + + K K ++++
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNE 91
Query: 137 --TMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYV 194
++ ++ P +V L++ F KD L +V+E+VP + H R R +
Sbjct: 92 KRILQAVNFPFLVKLEYSF-----KDNSNLYMVMEYVPGG--EMFSHLRRIG-RFSEPHA 143
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYI 254
+ Y QI Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +
Sbjct: 144 RFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXL 198
Query: 255 CSR-YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
C Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 87 PKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 138
P Q +++ + + +G GSFG V K ETG A+K + + K K ++ L
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYT 198
R+L N L FS D LY +V+E+VP + H R R + + Y
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLY--MVMEYVPGG--EMFSHLRRIG-RFSEPHARFYA 148
Query: 199 YQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 257
QI Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 149 AQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTP 203
Query: 258 YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 112/220 (50%), Gaps = 26/220 (11%)
Query: 87 PKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKRYKN--REL 135
P Q +++ + R +G GSFG V K ETG A+K KV++ K+ ++ E
Sbjct: 34 PAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 136 QTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVK 195
+ + ++ P +V L+ FS D LY +VLE+ P + H R R + +
Sbjct: 94 RIQQAVNFPFLVKLE---FSFKDNSNLY--MVLEYAPGG--EMFSHLRRIG-RFSEPHAR 145
Query: 196 LYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYIC 255
Y QI Y+H + + +RD+KP+NLL++ + +K+ DFG AK VKG +C
Sbjct: 146 FYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IKVADFGFAK-RVKGR--TWXLC 200
Query: 256 SR-YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 112/221 (50%), Gaps = 26/221 (11%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQ----- 136
P Q +++ + + +G GSFG V K ETG A+K + + K K ++++
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNE 91
Query: 137 --TMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYV 194
++ ++ P +V L++ F KD L +V+E+VP + H R R +
Sbjct: 92 KRILQAVNFPFLVKLEYSF-----KDNSNLYMVMEYVPGG--EMFSHLRRIG-RFSEPHA 143
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYI 254
+ Y QI Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +
Sbjct: 144 RFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXL 198
Query: 255 CSR-YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
C Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 87 PKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 138
P Q +++ + + +G GSFG V K ETG A+K + + K K ++ L
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYT 198
R+L N L FS D LY +V+E+VP + H R R + + Y
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLY--MVMEYVPGG--EMFSHLRRIG-RFSEPHARFYA 148
Query: 199 YQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 257
QI Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 149 AQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTP 203
Query: 258 YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 114/221 (51%), Gaps = 26/221 (11%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKRYKN--RE 134
P Q +++ + + +G GSFG V K ETG A+K KV++ K+ ++ E
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNE 91
Query: 135 LQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYV 194
+ ++ ++ P +V L++ F KD L +V+E+VP + H R R +
Sbjct: 92 KRILQAVNFPFLVKLEYSF-----KDNSNLYMVMEYVPGG--EMFSHLRRIG-RFSEPHA 143
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYI 254
+ Y QI Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +
Sbjct: 144 RFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXL 198
Query: 255 CSR-YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
C Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 149/318 (46%), Gaps = 68/318 (21%)
Query: 94 MAERVVGQGSFG-IVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL----DHPNVVS 148
++E+++G GS G +VFQ G VA+K++L D + + L ++LL DHPNV+
Sbjct: 18 VSEKILGYGSSGTVVFQGSF--QGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVI- 72
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYT-----YQICR 203
++ TTD+ +L + LE + + + + + + + L K Y QI
Sbjct: 73 -RYYCSETTDR---FLYIALELCNLNLQDLVESKNVSDENLKL--QKEYNPISLLRQIAS 126
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTH------------QVKLCDFGSAKVLVKGEPNI 251
+A++H + + HRD+KPQN+LV+ + ++ + DFG K L G+ +
Sbjct: 127 GVAHLHS-LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSF 185
Query: 252 SYIC-----SRYYRAPELIFGATEYTT------AIDIWSVGCVLAELLLGQPLFPGESGV 300
+ +RAPEL+ + T +IDI+S+GCV +L + P
Sbjct: 186 RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKY 244
Query: 301 DQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQY 360
+ II+ G + +E+KC++ + + EA DL+S+++ +
Sbjct: 245 SRESNIIR--GIFSLDEMKCLH--------------------DRSLIAEATDLISQMIDH 282
Query: 361 SPNLRCTALEACIHPFFY 378
P R TA++ HP F+
Sbjct: 283 DPLKRPTAMKVLRHPLFW 300
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDH 143
+Y + +G+G+F V A+ + TG+ VA+K + DK N RE++ M++L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 144 PNVVSLKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQIC 202
PN+V L + E L LV+E+ V+ Y A RM + QI
Sbjct: 73 PNIVKLFEVI-----ETEKTLYLVMEYASGGEVF----DYLVAHGRMKEKEARAKFRQIV 123
Query: 203 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
A+ Y H + HRD+K +NLL++ + +K+ DFG + G ++ S Y AP
Sbjct: 124 SAVQYCHQKF-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCGSPPYAAP 181
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGES 298
EL G +D+WS+G +L L+ G F G++
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 134/295 (45%), Gaps = 54/295 (18%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL---------- 141
+ R++G+G FG V+ + +TG+ A+K L KR K ++ +T+ L
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMK-CLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 142 -DHPNVVSLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKH--YSRASQRMPLIYVKL 196
D P +V + + F T DK L+ +L+ + + Y +++H +S A R
Sbjct: 249 GDCPFIVCMSYAF-HTPDK----LSFILDLMNGGDLHYHLSQHGVFSEADMR-------F 296
Query: 197 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 256
Y +I L ++H V +RD+KP N+L++ H H V++ D G A K +P+ S + +
Sbjct: 297 YAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGH-VRISDLGLACDFSKKKPHAS-VGT 353
Query: 257 RYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF-----PGESGVDQLVEIIKV-- 309
Y APE++ Y ++ D +S+GC+L +LL G F + +D++ + V
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVEL 413
Query: 310 ---------------LGTPTREEIKCMNPNYTEFK-FPQIKAHPWHKIFHKRMPP 348
L + C+ E K P ++ W +F ++ PP
Sbjct: 414 PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPP 468
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 134/295 (45%), Gaps = 54/295 (18%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL---------- 141
+ R++G+G FG V+ + +TG+ A+K L KR K ++ +T+ L
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMK-CLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 142 -DHPNVVSLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKH--YSRASQRMPLIYVKL 196
D P +V + + F T DK L+ +L+ + + Y +++H +S A R
Sbjct: 249 GDCPFIVCMSYAF-HTPDK----LSFILDLMNGGDLHYHLSQHGVFSEADMR-------F 296
Query: 197 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 256
Y +I L ++H V +RD+KP N+L++ H H V++ D G A K +P+ S + +
Sbjct: 297 YAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGH-VRISDLGLACDFSKKKPHAS-VGT 353
Query: 257 RYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF-----PGESGVDQLVEIIKV-- 309
Y APE++ Y ++ D +S+GC+L +LL G F + +D++ + V
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVEL 413
Query: 310 ---------------LGTPTREEIKCMNPNYTEFK-FPQIKAHPWHKIFHKRMPP 348
L + C+ E K P ++ W +F ++ PP
Sbjct: 414 PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPP 468
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLY 197
R+L N L FS D LY +V+E+ P + H R R + + Y
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY--MVMEYAPGG--EMFSHLRRIG-RFSEPHARFY 146
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
QI Y+H + + +RD+KP+NL+++ + +++ DFG AK VKG +C
Sbjct: 147 AAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGT 201
Query: 258 -YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 138/326 (42%), Gaps = 50/326 (15%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK--NRELQTM-----RLLDHPNVVSLKH 151
+G+G F F+ +T E A K V + K RE +M R L H +VV H
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF-H 83
Query: 152 CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGG 211
FF D ++ +VLE + H R + P + Y QI Y+H
Sbjct: 84 GFFEDND----FVFVVLELCRRRSL-LELHKRRKALTEP--EARYYLRQIVLGCQYLHRN 136
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISYICSRYYRAPELIFGATE 270
V HRD+K NL +N +VK+ DFG A KV GE + + Y APE +
Sbjct: 137 -RVIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE-VLSKKG 193
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 330
++ +D+WS+GC++ LL+G+P F E C+ Y
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL---- 227
Query: 331 PQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNARLP-N 389
+IK + + K + P A L+ ++LQ P R T E FF P ARLP
Sbjct: 228 -RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP-ARLPIT 283
Query: 390 GRPFPPLFNFKPQELKGASKELLSKL 415
PP F+ P L ++++ L+ L
Sbjct: 284 CLTIPPRFSIAPSSLDPSNRKPLTVL 309
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 148/323 (45%), Gaps = 60/323 (18%)
Query: 97 RVVGQGSFGIVFQAKCL---ETGETVAIK-----KVLQDKRYKNRELQTMRLLDH----P 144
+V+G G++G VF + + +TG+ A+K ++Q + ++L+H P
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 145 NVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIY--VKLYTYQIC 202
+V+L + F + E L+L+L+++ + ++ SQR V++Y +I
Sbjct: 120 FLVTLHYAF-----QTETKLHLILDYI-----NGGELFTHLSQRERFTEHEVQIYVGEIV 169
Query: 203 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY-ICSRY-YR 260
AL ++H +G+ +RDIK +N+L++ + H V L DFG +K V E +Y C Y
Sbjct: 170 LALEHLHK-LGIIYRDIKLENILLDSNGHVV-LTDFGLSKEFVADETERAYDFCGTIEYM 227
Query: 261 APELIFGA-TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 319
AP+++ G + + A+D WS+G ++ ELL G F + + EI +R +K
Sbjct: 228 APDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI-------SRRILK 280
Query: 320 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRC-----TALEACIH 374
P +PQ M A DL+ RLL P R A E H
Sbjct: 281 SEPP------YPQ------------EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322
Query: 375 PFFYELR-DPNARLPNGRPFPPL 396
FF ++ D A PF P+
Sbjct: 323 LFFQKINWDDLAAKKVPAPFKPV 345
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 87 PKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 138
P Q +++ + + +G GSFG V K ETG A+K + + K K ++ L
Sbjct: 26 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 85
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYT 198
R+L N L FS D LY +V+E+VP + H R R + + Y
Sbjct: 86 RILQAVNFPFLVKLEFSFKDNSNLY--MVMEYVPGG--EMFSHLRRIG-RFSEPHARFYA 140
Query: 199 YQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 257
QI Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 141 AQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTP 195
Query: 258 YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 196 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 138/326 (42%), Gaps = 50/326 (15%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK--NRELQTM-----RLLDHPNVVSLKH 151
+G+G F F+ +T E A K V + K RE +M R L H +VV H
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF-H 87
Query: 152 CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGG 211
FF D ++ +VLE + H R + P + Y QI Y+H
Sbjct: 88 GFFEDND----FVFVVLELCRRRSL-LELHKRRKALTEP--EARYYLRQIVLGCQYLHRN 140
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISYICSRYYRAPELIFGATE 270
V HRD+K NL +N +VK+ DFG A KV GE + + Y APE +
Sbjct: 141 -RVIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE-VLSKKG 197
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 330
++ +D+WS+GC++ LL+G+P F E C+ Y
Sbjct: 198 HSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL---- 231
Query: 331 PQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNARLP-N 389
+IK + + K + P A L+ ++LQ P R T E FF P ARLP
Sbjct: 232 -RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP-ARLPIT 287
Query: 390 GRPFPPLFNFKPQELKGASKELLSKL 415
PP F+ P L ++++ L+ L
Sbjct: 288 CLTIPPRFSIAPSSLDPSNRKPLTVL 313
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 133/289 (46%), Gaps = 52/289 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ ++ VA+K + + + K RE++ L HPN++ L
Sbjct: 29 RPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRL 88
Query: 150 KHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
+ F+ D+ +YL +LE+ P E + K + QR I +L AL Y
Sbjct: 89 YNYFY---DRRRIYL--ILEYAPRGELYKELQKSCTFDEQRTATIMEEL-----ADALMY 138
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 267
HG V HRDIKP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 139 CHGK-KVIHRDIKPENLLLG-LKGELKIADFGWS-VHAPSLRRKTMCGTLDYLPPEMIEG 195
Query: 268 ATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTE 327
+ +D+W +G + ELL+G P F S + I+KV +
Sbjct: 196 RM-HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV-----------------D 237
Query: 328 FKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
KFP +P A DL+S+LL+++P+ R + HP+
Sbjct: 238 LKFP------------ASVPTGAQDLISKLLRHNPSERLPLAQVSAHPW 274
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 120/257 (46%), Gaps = 33/257 (12%)
Query: 68 NGTETGHIIVTTIGGRNGQPK-QTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQ 126
+G +TG++ TIGG+ Q + + + E +G G+ G V++ + +TG +A+K++
Sbjct: 6 SGKQTGYL---TIGGQRYQAEINDLENLGE--MGSGTCGQVWKMRFRKTGHVIAVKQM-- 58
Query: 127 DKRYKNRELQTMRLLDHPNVVSLKHC---------FFSTTDKDELYLNLVLEFVPETVYR 177
+R N+E L+D V+ C F + TD + + +E + +
Sbjct: 59 -RRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTD-----VFIAMELMGTCAEK 112
Query: 178 VAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCD 237
+ K R +P + T I +AL Y+ GV HRD+KP N+L++ Q+KLCD
Sbjct: 113 LKK---RMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG-QIKLCD 168
Query: 238 FGSAKVLVKGEPNISYICSRYYRAPELIF----GATEYTTAIDIWSVGCVLAELLLGQPL 293
FG + LV + Y APE I +Y D+WS+G L EL GQ
Sbjct: 169 FGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ-- 226
Query: 294 FPGESGVDQLVEIIKVL 310
FP ++ + KVL
Sbjct: 227 FPYKNCKTDFEVLTKVL 243
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 87 PKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 138
P Q +++ + + +G GSFG V K ETG A+K + + K K ++ L
Sbjct: 26 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 85
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYT 198
R+L N L FS D LY +V+E+VP + H R R + + Y
Sbjct: 86 RILQAVNFPFLVKLEFSFKDNSNLY--MVMEYVPGG--EMFSHLRRIG-RFXEPHARFYA 140
Query: 199 YQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 257
QI Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 141 AQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTP 195
Query: 258 YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 196 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 125/294 (42%), Gaps = 48/294 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIK----KVLQDKRYK-NRELQTMRLLDHPNVV 147
Y V+G G+F V A+ T + VAIK K L+ K E+ + + HPN+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAK---HYSRASQRMPLIYVKLYTYQICRA 204
+L + S LYL + L E R+ + + R + R+ +Q+ A
Sbjct: 80 ALDDIYESGG---HLYLIMQLVSGGELFDRIVEKGFYTERDASRL--------IFQVLDA 128
Query: 205 LAYIHGGIGVCHRDIKPQNLLVNP--HTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
+ Y+H +G+ HRD+KP+NLL ++ + DFG +K+ G + + Y AP
Sbjct: 129 VKYLHD-LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
E + Y+ A+D WS+G + LL G P F E+ +I+K
Sbjct: 188 E-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA------------- 233
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
EF P W I A D + L++ P R T +A HP+
Sbjct: 234 --EYEFDSPY-----WDDI-----SDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 144/331 (43%), Gaps = 51/331 (15%)
Query: 90 TISYMAERVVGQGSFGIVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDH 143
T Y +G+G+F +V + L TG A K + +D + RE + RLL H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 144 PNVVSLKHCFFSTTDKDELYLNLVL--EFVPETVYRVAKHYSRASQRMPLIYVKLYTYQI 201
N+V L H S L +LV E + V R ++YS A + QI
Sbjct: 63 SNIVRL-HDSISEEGFHYLVFDLVTGGELFEDIVAR--EYYSEADASHCI-------QQI 112
Query: 202 CRALAYIHGGIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPN--ISYICSR 257
A+ + H +GV HRD+KP+NLL+ VKL DFG A + V+G+ + +
Sbjct: 113 LEAVLHCHQ-MGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTP 170
Query: 258 YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 317
Y +PE + Y +DIW+ G +L LL+G P F E +L + IK
Sbjct: 171 GYLSPE-VLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQ-HKLYQQIKA-------- 220
Query: 318 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
+ FP + W + PEA +L++++L +P R TA EA HP+
Sbjct: 221 --------GAYDFP---SPEWDTV-----TPEAKNLINQMLTINPAKRITAHEALKHPWV 264
Query: 378 YELRDPNARLPNGRPFPPLFNFKP-QELKGA 407
+ + + L F ++LKGA
Sbjct: 265 CQRSTVASMMHRQETVECLKKFNARRKLKGA 295
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 87 PKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 138
P Q +++ + + +G GSFG V K ETG A+K + + K K ++ L
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYT 198
R+L N L FS D LY +V+E+ P + H R R + + Y
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLY--MVMEYAPGG--EMFSHLRRIG-RFSEPHARFYA 148
Query: 199 YQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR- 257
QI Y+H + + +RD+KP+NL+++ + +K+ DFG AK VKG +C
Sbjct: 149 AQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGR--TWXLCGTP 203
Query: 258 YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDH 143
+Y + +G+G+F V A+ + TG+ VA++ + DK N RE++ M++L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 144 PNVVSLKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQIC 202
PN+V L + E L LV+E+ V+ Y A RM + QI
Sbjct: 73 PNIVKLFEVI-----ETEKTLYLVMEYASGGEVF----DYLVAHGRMKEKEARAKFRQIV 123
Query: 203 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
A+ Y H + HRD+K +NLL++ + +K+ DFG + G ++ S Y AP
Sbjct: 124 SAVQYCHQKF-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCGSPPYAAP 181
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGES 298
EL G +D+WS+G +L L+ G F G++
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 148/337 (43%), Gaps = 52/337 (15%)
Query: 98 VVGQGSFGIVFQAKCLET---GETVAIKKVLQDKRYKNRELQTMRLLD-----HPNVVSL 149
+G+G+FG V Q C++ G VA+K + ++YK + +L+ P+ +L
Sbjct: 40 TLGEGTFGRVVQ--CVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPDNKNL 97
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
F D ++ + E + + + K + P+ V+ +Q+C+A+ ++H
Sbjct: 98 CVQMFDWFDY-HGHMCISFELLGLSTFDFLKDNNYLP--YPIHQVRHMAFQLCQAVKFLH 154
Query: 210 GGIGVCHRDIKPQNLL-VNPH-----------------THQVKLCDFGSAKVLVKGEPNI 251
+ H D+KP+N+L VN + V++ DFGSA E +
Sbjct: 155 DN-KLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATF--DHEHHS 211
Query: 252 SYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 311
+ + +R+YRAPE+I ++ D+WS+GC++ E +G LF + L + ++LG
Sbjct: 212 TIVSTRHYRAPEVILELG-WSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILG 270
Query: 312 -TPTREEIKC------------MNPNYTEFKFPQIKAHPWHKIFHKRMPP--EAVDLVSR 356
P+R K + N + ++ + P + + DL+
Sbjct: 271 PIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEHHQLFDLIES 330
Query: 357 LLQYSPNLRCTALEACIHPFFYELRD--PNARLPNGR 391
+L+Y P R T EA HPFF LR PN + R
Sbjct: 331 MLEYEPAKRLTLGEALQHPFFARLRAEPPNKLWDSSR 367
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 109/226 (48%), Gaps = 23/226 (10%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--------R 133
G + QP +Y + +G+G+F V A+ + TG VAIK + DK N R
Sbjct: 4 GSDEQP-HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKII--DKTQLNPTSLQKLFR 60
Query: 134 ELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLI 192
E++ M++L+HPN+V L + E L L++E+ V+ Y A RM
Sbjct: 61 EVRIMKILNHPNIVKLFEVI-----ETEKTLYLIMEYASGGEVF----DYLVAHGRMKEK 111
Query: 193 YVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 252
+ QI A+ Y H + HRD+K +NLL++ + +K+ DFG + G +
Sbjct: 112 EARSKFRQIVSAVQYCHQK-RIVHRDLKAENLLLDADMN-IKIADFGFSNEFTVGGKLDT 169
Query: 253 YICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGES 298
+ S Y APEL G +D+WS+G +L L+ G F G++
Sbjct: 170 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 215
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 130/303 (42%), Gaps = 48/303 (15%)
Query: 99 VGQGSFGIVFQAKCLE--TGETVAIKKVLQ----DKRYKNRELQTMRLLDHPNVVSLKHC 152
+G G+FG+V +C+E TG K + DK E+ M L HP +++L
Sbjct: 59 LGSGAFGVVH--RCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 116
Query: 153 FFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F +D+ + L+LEF+ E R+A + S+ + Y++ Q C L ++H
Sbjct: 117 F-----EDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMR----QACEGLKHMHE 167
Query: 211 GIGVCHRDIKPQNLLV-NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGAT 269
+ H DIKP+N++ VK+ DFG A L E + + APE++
Sbjct: 168 H-SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIV-DRE 225
Query: 270 EYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 329
D+W++G + LL G F GE ++ L + +K + + E
Sbjct: 226 PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL------------QNVKRCDWEFDEDA 273
Query: 330 FPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFY-ELRDPNARLP 388
F + PEA D + LLQ P R T +A HP+ + + +R+P
Sbjct: 274 FSSVS-------------PEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIP 320
Query: 389 NGR 391
+ R
Sbjct: 321 SSR 323
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 136/301 (45%), Gaps = 40/301 (13%)
Query: 77 VTTIGGRNGQPKQTISYMAERV-----VGQGSFGIVFQAKCLETGETVAIKKVLQ--DKR 129
+ + G P+Q + AE + +G+G++G V + +G+ +A+K++ D++
Sbjct: 3 IESSGKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEK 62
Query: 130 YKNRELQ----TMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKH-YSR 184
+ + L MR D P +V F D + +E + + + K+ YS
Sbjct: 63 EQKQLLMDLDVVMRSSDCPYIVQFYGALFREGD-----CWICMELMSTSFDKFYKYVYSV 117
Query: 185 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL 244
+P + T +AL ++ + + HRDIKP N+L++ + +KLCDFG + L
Sbjct: 118 LDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLD-RSGNIKLCDFGISGQL 176
Query: 245 VKGEPNISYICSRYYRAPELIFGATE---YTTAIDIWSVGCVLAELLLGQPLFPGESGV- 300
V R Y APE I + Y D+WS+G L EL G+ +P + V
Sbjct: 177 VDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF 236
Query: 301 DQLVEIIKVLGTP---TREEIKCMNPNYTEF-------------KFPQIKAHPWHKIFHK 344
DQL +++K G P + E + +P++ F K+ ++ HP+ ++ +
Sbjct: 237 DQLTQVVK--GDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEE 294
Query: 345 R 345
R
Sbjct: 295 R 295
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 127/284 (44%), Gaps = 47/284 (16%)
Query: 94 MAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK---NRELQTMRLLD-HPNVVSL 149
+ ++ +G+GSF I KC+ A + KR + +E+ ++L + HPN+V L
Sbjct: 14 LKDKPLGEGSFSIC--RKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKL 71
Query: 150 KHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
F D+L+ LV+E + E R+ K + I KL + A+++
Sbjct: 72 HEVF-----HDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVS-----AVSH 121
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPNISYIC-SRYYRAPEL 264
+H +GV HRD+KP+NLL ++K+ DFG A++ + C + +Y APEL
Sbjct: 122 MHD-VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPEL 180
Query: 265 IFGATEYTTAIDIWSVGCVLAELLLGQPLFPGES---GVDQLVEIIKVLGTPTREEIKCM 321
+ Y + D+WS+G +L +L GQ F VEI+K +
Sbjct: 181 L-NQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKK--------- 230
Query: 322 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLR 365
+F F + W K + EA DL+ LL PN R
Sbjct: 231 ----GDFSF---EGEAW-----KNVSQEAKDLIQGLLTVDPNKR 262
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 131/299 (43%), Gaps = 62/299 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETG----------ETVAIKKVLQDKRYKNRELQTMRLLDHPNV 146
+++G+G+FG V K TG E + K + +NR LQ R HP +
Sbjct: 14 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR---HPFL 70
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRA 204
+LK+ F T D+ L V+E+ E + +++ + R + Y +I A
Sbjct: 71 TALKYSF-QTHDR----LCFVMEYANGGELFFHLSRERVFSEDR-----ARFYGAEIVSA 120
Query: 205 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPE 263
L Y+H V +RD+K +NL+++ H +K+ DFG K +K + C Y APE
Sbjct: 121 LDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFCGTPEYLAPE 179
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 323
+ +Y A+D W +G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 180 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEIR---- 227
Query: 324 NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRC-----TALEACIHPFF 377
F + + PEA L+S LL+ P R A E H FF
Sbjct: 228 ------------------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 268
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 131/299 (43%), Gaps = 62/299 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETG----------ETVAIKKVLQDKRYKNRELQTMRLLDHPNV 146
+++G+G+FG V K TG E + K + +NR LQ R HP +
Sbjct: 16 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR---HPFL 72
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRA 204
+LK+ F T D+ L V+E+ E + +++ + R + Y +I A
Sbjct: 73 TALKYSF-QTHDR----LCFVMEYANGGELFFHLSRERVFSEDR-----ARFYGAEIVSA 122
Query: 205 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPE 263
L Y+H V +RD+K +NL+++ H +K+ DFG K +K + C Y APE
Sbjct: 123 LDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFCGTPEYLAPE 181
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 323
+ +Y A+D W +G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 182 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEIR---- 229
Query: 324 NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRC-----TALEACIHPFF 377
F + + PEA L+S LL+ P R A E H FF
Sbjct: 230 ------------------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 270
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLY 197
R+L N L FS D LY +V+E+V + H R R + + Y
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLY--MVMEYVAGG--EMFSHLRRIG-RFSEPHARFY 146
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
QI Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 147 AAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGT 201
Query: 258 -YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y APE+I + Y A+D W++G ++ E+ G P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 131/299 (43%), Gaps = 62/299 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETG----------ETVAIKKVLQDKRYKNRELQTMRLLDHPNV 146
+++G+G+FG V K TG E + K + +NR LQ R HP +
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR---HPFL 71
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRA 204
+LK+ F T D+ L V+E+ E + +++ + R + Y +I A
Sbjct: 72 TALKYSF-QTHDR----LCFVMEYANGGELFFHLSRERVFSEDR-----ARFYGAEIVSA 121
Query: 205 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPE 263
L Y+H V +RD+K +NL+++ H +K+ DFG K +K + C Y APE
Sbjct: 122 LDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFCGTPEYLAPE 180
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 323
+ +Y A+D W +G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 181 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEIR---- 228
Query: 324 NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRC-----TALEACIHPFF 377
F + + PEA L+S LL+ P R A E H FF
Sbjct: 229 ------------------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 269
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 148/318 (46%), Gaps = 68/318 (21%)
Query: 94 MAERVVGQGSFG-IVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL----DHPNVVS 148
++E+++G GS G +VFQ G VA+K++L D + + L ++LL DHPNV+
Sbjct: 18 VSEKILGYGSSGTVVFQGSF--QGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVI- 72
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYT-----YQICR 203
++ TTD+ +L + LE + + + + + + + L K Y QI
Sbjct: 73 -RYYCSETTDR---FLYIALELCNLNLQDLVESKNVSDENLKL--QKEYNPISLLRQIAS 126
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTH------------QVKLCDFGSAKVLVKGEPNI 251
+A++H + + HRD+KPQN+LV+ + ++ + DFG K L G+
Sbjct: 127 GVAHLHS-LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 185
Query: 252 SYICSR-----YYRAPELIFGATEYTT------AIDIWSVGCVLAELLLGQPLFPGESGV 300
+ +RAPEL+ + T +IDI+S+GCV +L + P
Sbjct: 186 RXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKY 244
Query: 301 DQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQY 360
+ II+ G + +E+KC++ + + EA DL+S+++ +
Sbjct: 245 SRESNIIR--GIFSLDEMKCLH--------------------DRSLIAEATDLISQMIDH 282
Query: 361 SPNLRCTALEACIHPFFY 378
P R TA++ HP F+
Sbjct: 283 DPLKRPTAMKVLRHPLFW 300
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 130/299 (43%), Gaps = 62/299 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETG----------ETVAIKKVLQDKRYKNRELQTMRLLDHPNV 146
+++G+G+FG V K TG E + K + +NR LQ R HP +
Sbjct: 157 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR---HPFL 213
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRA 204
+LK+ F T D+ L V+E+ E + +++ + R + Y +I A
Sbjct: 214 TALKYSF-QTHDR----LCFVMEYANGGELFFHLSRERVFSEDR-----ARFYGAEIVSA 263
Query: 205 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPE 263
L Y+H V +RD+K +NL+++ H +K+ DFG K +K + C Y APE
Sbjct: 264 LDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKTFCGTPEYLAPE 322
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 323
+ +Y A+D W +G V+ E++ G+ F + ++L E+I +
Sbjct: 323 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM-------------- 366
Query: 324 NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRC-----TALEACIHPFF 377
E +FP+ + PEA L+S LL+ P R A E H FF
Sbjct: 367 --EEIRFPRT------------LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 411
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 107/205 (52%), Gaps = 26/205 (12%)
Query: 99 VGQGSFGIV----FQAKCLETGETVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 150
+G+G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 151 HCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
+S ++ L L++E++P R + + +R+ I + YT QIC+ + Y+ G
Sbjct: 79 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYL-G 132
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 263
HR++ +N+LV + ++VK+ DFG KVL + EP S I ++ APE
Sbjct: 133 TKRYIHRNLATRNILVE-NENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI---FWYAPE 188
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
+ ++++ A D+WS G VL EL
Sbjct: 189 SL-TESKFSVASDVWSFGVVLYELF 212
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 130/299 (43%), Gaps = 62/299 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETG----------ETVAIKKVLQDKRYKNRELQTMRLLDHPNV 146
+++G+G+FG V K TG E + K + +NR LQ R HP +
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR---HPFL 210
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRA 204
+LK+ F T D+ L V+E+ E + +++ + R + Y +I A
Sbjct: 211 TALKYSF-QTHDR----LCFVMEYANGGELFFHLSRERVFSEDR-----ARFYGAEIVSA 260
Query: 205 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPE 263
L Y+H V +RD+K +NL+++ H +K+ DFG K +K + C Y APE
Sbjct: 261 LDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKTFCGTPEYLAPE 319
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 323
+ +Y A+D W +G V+ E++ G+ F + ++L E+I +
Sbjct: 320 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM-------------- 363
Query: 324 NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRC-----TALEACIHPFF 377
E +FP+ + PEA L+S LL+ P R A E H FF
Sbjct: 364 --EEIRFPRT------------LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDH 143
+Y + +G+G+F V A+ + TG+ VA+K + DK N RE++ M++L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 144 PNVVSLKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQIC 202
PN+V L + E L LV+E+ V+ Y A RM + QI
Sbjct: 73 PNIVKLFEVI-----ETEKTLYLVMEYASGGEVF----DYLVAHGRMKEKEARAKFRQIV 123
Query: 203 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
A+ Y H + HRD+K +NLL++ + +K+ DFG + G ++ + Y AP
Sbjct: 124 SAVQYCHQKF-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDAFCGAPPYAAP 181
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGES 298
EL G +D+WS+G +L L+ G F G++
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 137/326 (42%), Gaps = 50/326 (15%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK--NRELQTM-----RLLDHPNVVSLKH 151
+G+G F F+ +T E A K V + K RE +M R L H +VV H
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF-H 107
Query: 152 CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGG 211
FF D ++ +VLE + H R + P + Y QI Y+H
Sbjct: 108 GFFEDND----FVFVVLELCRRRSL-LELHKRRKALTEP--EARYYLRQIVLGCQYLHRN 160
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISYICSRYYRAPELIFGATE 270
V HRD+K NL +N +VK+ DFG A KV GE + Y APE +
Sbjct: 161 -RVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE-VLSKKG 217
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 330
++ +D+WS+GC++ LL+G+P F E C+ Y
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL---- 251
Query: 331 PQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNARLP-N 389
+IK + + K + P A L+ ++LQ P R T E FF P ARLP
Sbjct: 252 -RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP-ARLPIT 307
Query: 390 GRPFPPLFNFKPQELKGASKELLSKL 415
PP F+ P L ++++ L+ L
Sbjct: 308 CLTIPPRFSIAPSSLDPSNRKPLTVL 333
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 137/326 (42%), Gaps = 50/326 (15%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK--NRELQTM-----RLLDHPNVVSLKH 151
+G+G F F+ +T E A K V + K RE +M R L H +VV H
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF-H 105
Query: 152 CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGG 211
FF D ++ +VLE + H R + P + Y QI Y+H
Sbjct: 106 GFFEDND----FVFVVLELCRRRSL-LELHKRRKALTEP--EARYYLRQIVLGCQYLHRN 158
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISYICSRYYRAPELIFGATE 270
V HRD+K NL +N +VK+ DFG A KV GE + Y APE +
Sbjct: 159 -RVIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE-VLSKKG 215
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 330
++ +D+WS+GC++ LL+G+P F E C+ Y
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL---- 249
Query: 331 PQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNARLP-N 389
+IK + + K + P A L+ ++LQ P R T E FF P ARLP
Sbjct: 250 -RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP-ARLPIT 305
Query: 390 GRPFPPLFNFKPQELKGASKELLSKL 415
PP F+ P L ++++ L+ L
Sbjct: 306 CLTIPPRFSIAPSSLDPSNRKPLTVL 331
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 129/298 (43%), Gaps = 58/298 (19%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDHP 144
Y+ +G G+FG V K TG VA+K +L ++ ++ RE+Q ++L HP
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVK-ILNRQKIRSLDVVGKIRREIQNLKLFRHP 76
Query: 145 NVVSLKHCFFSTTDKDELYLNLVLEFVP-----ETVYRVAKHYSRASQRMPLIYVKLYTY 199
+++ L + +D + +V+E+V + + + + + S+R+
Sbjct: 77 HIIKLYQVISTPSD-----IFMVMEYVSGGELFDYICKNGRLDEKESRRL--------FQ 123
Query: 200 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYY 259
QI + Y H + V HRD+KP+N+L++ H + K+ DFG + ++ GE S Y
Sbjct: 124 QILSGVDYCHRHM-VVHRDLKPENVLLDAHMN-AKIADFGLSNMMSDGEFLRXSCGSPNY 181
Query: 260 RAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 319
APE+I G +DIWS G +L LL G F + PT +
Sbjct: 182 AAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH-------------VPTLFKKI 228
Query: 320 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
C YT PQ + P + L+ +LQ P R T + H +F
Sbjct: 229 CDGIFYT----PQY------------LNPSVISLLKHMLQVDPMKRATIKDIREHEWF 270
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 105/216 (48%), Gaps = 22/216 (10%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDH 143
+Y + +G+G+F V A+ + TG+ VA++ + DK N RE++ M++L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 144 PNVVSLKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQIC 202
PN+V L + E L LV+E+ V+ Y A RM + QI
Sbjct: 73 PNIVKLFEVI-----ETEKTLYLVMEYASGGEVF----DYLVAHGRMKEKEARAKFRQIV 123
Query: 203 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
A+ Y H + HRD+K +NLL++ + +K+ DFG + G + S Y AP
Sbjct: 124 SAVQYCHQKF-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDEFCGSPPYAAP 181
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGES 298
EL G +D+WS+G +L L+ G F G++
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 133/295 (45%), Gaps = 43/295 (14%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--RELQTMRLLDH 143
QP++ + + +G+GS+G V++A ETG+ VAIK+V + + +E+ M+ D
Sbjct: 26 QPEEVFDVLEK--LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDS 83
Query: 144 PNVVSLKHCFFSTTDKDELYLNLVLEFV-PETVYRVAKHYSRASQRMPLIYVKLYTYQIC 202
P+VV +F TD L +V+E+ +V + + ++ + + T
Sbjct: 84 PHVVKYYGSYFKNTD-----LWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQST---L 135
Query: 203 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS-YICSRYYRA 261
+ L Y+H + HRDIK N+L+N H KL DFG A L + I + ++ A
Sbjct: 136 KGLEYLH-FMRKIHRDIKAGNILLNTEGH-AKLADFGVAGQLTDXMAKRNXVIGTPFWMA 193
Query: 262 PELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 321
PE+I Y DIWS+G E+ G+P + + + + PT
Sbjct: 194 PEVI-QEIGYNCVADIWSLGITAIEMAEGKPPYA------DIHPMRAIFMIPT------- 239
Query: 322 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
NP T F+ P++ W F D V + L SP R TA + HPF
Sbjct: 240 NPPPT-FRKPEL----WSDNF--------TDFVKQCLVKSPEQRATATQLLQHPF 281
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 26/218 (11%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDH 143
+Y + +G+G+F V A+ + TG+ VA+K + DK N RE++ M++L+H
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNH 65
Query: 144 PNVVSLKHCFFSTTDKDELYLNLVLEFVPETV---YRVAKHYSRASQRMPLIYVKLYTYQ 200
PN+V L + E L LV+E+ Y VA + + + + Q
Sbjct: 66 PNIVKLFEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGWMKEKE------ARAKFRQ 114
Query: 201 ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR 260
I A+ Y H + HRD+K +NLL++ + +K+ DFG + G ++ S Y
Sbjct: 115 IVSAVQYCHQKF-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCGSPPYA 172
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGES 298
APEL G +D+WS+G +L L+ G F G++
Sbjct: 173 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 210
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 136/310 (43%), Gaps = 58/310 (18%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ + +A+K + + + K RE++ L HPN++ +
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 150 KHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
+ F D+ +YL +LEF P +Y+ + + R ++ +++ ++ AL Y
Sbjct: 80 YNYFH---DRKRIYL--MLEFAPRGELYKELQKHGRFDEQRSATFME----ELADALHYC 130
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ + ++K+ DFG + V + Y PE+I G
Sbjct: 131 HER-KVIHRDIKPENLLMG-YKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGK 187
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
T + +D+W G + E L+G P F S + I+ V +
Sbjct: 188 T-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-----------------DL 229
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNARLP 388
KFP + + DL+S+LL+Y P R HP+ N+R
Sbjct: 230 KFPPF------------LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWV----KANSR-- 271
Query: 389 NGRPFPPLFN 398
R PP++
Sbjct: 272 --RVLPPVYQ 279
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 136/310 (43%), Gaps = 58/310 (18%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ + +A+K + + + K RE++ L HPN++ +
Sbjct: 21 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 80
Query: 150 KHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
+ F D+ +YL +LEF P +Y+ + + R ++ +++ ++ AL Y
Sbjct: 81 YNYFH---DRKRIYL--MLEFAPRGELYKELQKHGRFDEQRSATFME----ELADALHYC 131
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ + ++K+ DFG + V + Y PE+I G
Sbjct: 132 HER-KVIHRDIKPENLLMG-YKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGK 188
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
T + +D+W G + E L+G P F S + I+ V +
Sbjct: 189 T-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-----------------DL 230
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNARLP 388
KFP + + DL+S+LL+Y P R HP+ N+R
Sbjct: 231 KFPPF------------LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWV----KANSR-- 272
Query: 389 NGRPFPPLFN 398
R PP++
Sbjct: 273 --RVLPPVYQ 280
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 104/201 (51%), Gaps = 22/201 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVA-------IKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 151
+G G+ G+VF+ +G +A IK ++++ RELQ + + P +V
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII--RELQVLHECNSPYIVGFYG 133
Query: 152 CFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F+S + +++ +E + ++ +V K + R+P + + + + L Y+
Sbjct: 134 AFYSDGE-----ISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLRE 184
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y +PE + G T
Sbjct: 185 KHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-TH 241
Query: 271 YTTAIDIWSVGCVLAELLLGQ 291
Y+ DIWS+G L E+ +G+
Sbjct: 242 YSVQSDIWSMGLSLVEMAVGR 262
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 105/216 (48%), Gaps = 22/216 (10%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDH 143
+Y + +G+G+F V A+ + TG VAIK + DK N RE++ M++L+H
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKII--DKTQLNPTSLQKLFREVRIMKILNH 73
Query: 144 PNVVSLKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQIC 202
PN+V L + E L L++E+ V+ Y A RM + QI
Sbjct: 74 PNIVKLFEVI-----ETEKTLYLIMEYASGGEVF----DYLVAHGRMKEKEARSKFRQIV 124
Query: 203 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
A+ Y H + HRD+K +NLL++ + +K+ DFG + G ++ + Y AP
Sbjct: 125 SAVQYCHQK-RIVHRDLKAENLLLDADMN-IKIADFGFSNEFTVGGKLDAFCGAPPYAAP 182
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGES 298
EL G +D+WS+G +L L+ G F G++
Sbjct: 183 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 127/294 (43%), Gaps = 48/294 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIK----KVLQDKRYK-NRELQTMRLLDHPNVV 147
Y V+G G+F V A+ T + VAIK + L+ K E+ + + HPN+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAK---HYSRASQRMPLIYVKLYTYQICRA 204
+L + S LYL + L E R+ + + R + R+ +Q+ A
Sbjct: 80 ALDDIYESGG---HLYLIMQLVSGGELFDRIVEKGFYTERDASRL--------IFQVLDA 128
Query: 205 LAYIHGGIGVCHRDIKPQNLLVNP--HTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
+ Y+H +G+ HRD+KP+NLL ++ + DFG +K+ G + + Y AP
Sbjct: 129 VKYLHD-LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
E + Y+ A+D WS+G + LL G P F E+ +I+K
Sbjct: 188 E-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK-------------- 232
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
E++F + W I A D + L++ P R T +A HP+
Sbjct: 233 ---AEYEF---DSPYWDDI-----SDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 136/310 (43%), Gaps = 58/310 (18%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 149
R +G+G FG V+ A+ + +A+K + + + K RE++ L HPN++ +
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 150 KHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
+ F D+ +YL +LEF P +Y+ + + R ++ +++ ++ AL Y
Sbjct: 80 YNYFH---DRKRIYL--MLEFAPRGELYKELQKHGRFDEQRSATFME----ELADALHYC 130
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 268
H V HRDIKP+NLL+ + ++K+ DFG + V + Y PE+I G
Sbjct: 131 HER-KVIHRDIKPENLLMG-YKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGK 187
Query: 269 TEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
T + +D+W G + E L+G P F S + I+ V +
Sbjct: 188 T-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-----------------DL 229
Query: 329 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNARLP 388
KFP + + DL+S+LL+Y P R HP+ N+R
Sbjct: 230 KFPPF------------LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWV----KANSR-- 271
Query: 389 NGRPFPPLFN 398
R PP++
Sbjct: 272 --RVLPPVYQ 279
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 132/293 (45%), Gaps = 57/293 (19%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMR-------LLDHPNVVSLK 150
++G+GSF V++A+ + TG VAIK + + YK +Q ++ L HP+++ L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 151 HCFFSTTDKDELYLNLVLEF-----VPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+ F +D Y+ LVLE + + K +S R + +QI +
Sbjct: 78 NYF-----EDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARH-------FMHQIITGM 125
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL-VKGEPNISYICSRYYRAPEL 264
Y+H G+ HRD+ NLL+ + +K+ DFG A L + E + + + Y +PE
Sbjct: 126 LYLHSH-GILHRDLTLSNLLLTRNM-NIKIADFGLATQLKMPHEKHYTLCGTPNYISPE- 182
Query: 265 IFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 324
I + + D+WS+GC+ LL+G+P F ++ + L +++
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV----------------- 225
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
+++ P + EA DL+ +LL+ +P R + HPF
Sbjct: 226 LADYEMPSF------------LSIEAKDLIHQLLRRNPADRLSLSSVLDHPFM 266
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 133/298 (44%), Gaps = 57/298 (19%)
Query: 97 RVVGQGSFGIVFQAKCL---ETGETVAIK--------KVLQDKRYKNRELQTMRLLDHPN 145
RV+G+G +G VFQ + + TG+ A+K + +D + E + + HP
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 146 VVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+V L + F T K L L+LE++ + + R M Y +I AL
Sbjct: 83 IVDLIYAF-QTGGK----LYLILEYL--SGGELFMQLEREGIFMEDTAC-FYLAEISMAL 134
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV-KGEPNISYICSRYYRAPEL 264
++H G+ +RD+KP+N+++N H VKL DFG K + G ++ + Y APE+
Sbjct: 135 GHLHQK-GIIYRDLKPENIMLN-HQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEI 192
Query: 265 IFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 324
+ + + A+D WS+G ++ ++L G P F GE+ + +I+K K P
Sbjct: 193 LM-RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC---------KLNLPP 242
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRC-----TALEACIHPFF 377
Y + EA DL+ +LL+ + R A E HPFF
Sbjct: 243 Y--------------------LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFF 280
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 125/294 (42%), Gaps = 48/294 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIK----KVLQDKRYK-NRELQTMRLLDHPNVV 147
Y V+G G+F V A+ T + VAIK + L+ K E+ + + HPN+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAK---HYSRASQRMPLIYVKLYTYQICRA 204
+L + S LYL + L E R+ + + R + R+ +Q+ A
Sbjct: 80 ALDDIYESGG---HLYLIMQLVSGGELFDRIVEKGFYTERDASRL--------IFQVLDA 128
Query: 205 LAYIHGGIGVCHRDIKPQNLLVNP--HTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
+ Y+H +G+ HRD+KP+NLL ++ + DFG +K+ G + + Y AP
Sbjct: 129 VKYLHD-LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
E + Y+ A+D WS+G + LL G P F E+ +I+K
Sbjct: 188 E-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA------------- 233
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
EF P W I A D + L++ P R T +A HP+
Sbjct: 234 --EYEFDSPY-----WDDI-----SDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 130/298 (43%), Gaps = 57/298 (19%)
Query: 97 RVVGQGSFGIVFQAKCL---ETGETVAIK--------KVLQDKRYKNRELQTMRLLDHPN 145
RV+G+G +G VFQ + + TG+ A+K + +D + E + + HP
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 146 VVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+V L + F T K L L+LE++ + + R M Y +I AL
Sbjct: 83 IVDLIYAF-QTGGK----LYLILEYL--SGGELFMQLEREGIFMEDTAC-FYLAEISMAL 134
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-YRAPEL 264
++H G+ +RD+KP+N+++N H VKL DFG K + C Y APE+
Sbjct: 135 GHLHQK-GIIYRDLKPENIMLN-HQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEI 192
Query: 265 IFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 324
+ + + A+D WS+G ++ ++L G P F GE+ + +I+K K P
Sbjct: 193 LM-RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC---------KLNLPP 242
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRC-----TALEACIHPFF 377
Y + EA DL+ +LL+ + R A E HPFF
Sbjct: 243 Y--------------------LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFF 280
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 97 RVVGQGSFGIVFQAK--------CLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVS 148
+V+G+GSFG V A+ ++ + AI K ++K + ++ + HP +V
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 149 LKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALA 206
L H F T DK L VL+++ E Y + + R + Y +I AL
Sbjct: 104 L-HFSFQTADK----LYFVLDYINGGELFYHLQRERCFLEPR-----ARFYAAEIASALG 153
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELI 265
Y+H + + +RD+KP+N+L++ H V L DFG K ++ S C + Y APE +
Sbjct: 154 YLHS-LNIVYRDLKPENILLDSQGHIV-LTDFGLCKENIEHNSTTSTFCGTPEYLAPE-V 210
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y +D W +G VL E+L G P F
Sbjct: 211 LHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 125/294 (42%), Gaps = 48/294 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIK----KVLQDKRYK-NRELQTMRLLDHPNVV 147
Y V+G G+F V A+ T + VAIK + L+ K E+ + + HPN+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAK---HYSRASQRMPLIYVKLYTYQICRA 204
+L + S LYL + L E R+ + + R + R+ +Q+ A
Sbjct: 80 ALDDIYESGG---HLYLIMQLVSGGELFDRIVEKGFYTERDASRL--------IFQVLDA 128
Query: 205 LAYIHGGIGVCHRDIKPQNLLVNP--HTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
+ Y+H +G+ HRD+KP+NLL ++ + DFG +K+ G + + Y AP
Sbjct: 129 VKYLHD-LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
E + Y+ A+D WS+G + LL G P F E+ +I+K
Sbjct: 188 E-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA------------- 233
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
EF P W I A D + L++ P R T +A HP+
Sbjct: 234 --EYEFDSPY-----WDDI-----SDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 23/213 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVA-------IKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 151
+G G+ G+VF+ +G +A IK ++++ RELQ + + P +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII--RELQVLHECNSPYIVGFYG 71
Query: 152 CFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
F+S + +++ +E + ++ +V K + R+P + + + + L Y+
Sbjct: 72 AFYSDGE-----ISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y +PE + G T
Sbjct: 123 KHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-TH 179
Query: 271 YTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQ 302
Y+ DIWS+G L E+ +G+ P+ P ++ D
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDS 212
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 114/229 (49%), Gaps = 25/229 (10%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQ-------DKRYKNRELQTMRLLDHP 144
Y +V+G+G+FG V + + + A+K + + D + E M + P
Sbjct: 76 DYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 135
Query: 145 NVVSLKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICR 203
VV L C F +D+ YL +V+E++P + + +Y +P + K YT ++
Sbjct: 136 WVVQL-FCAF----QDDKYLYMVMEYMPGGDLVNLMSNYD-----VPEKWAKFYTAEVVL 185
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNI-SYICSRYYRA 261
AL IH +G+ HRD+KP N+L++ H H +KL DFG+ K+ G + + + + Y +
Sbjct: 186 ALDAIHS-MGLIHRDVKPDNMLLDKHGH-LKLADFGTCMKMDETGMVHCDTAVGTPDYIS 243
Query: 262 PELI---FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 307
PE++ G Y D WSVG L E+L+G F +S V +I+
Sbjct: 244 PEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIM 292
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 110/238 (46%), Gaps = 41/238 (17%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQ-------DKRYKNRELQTMRLLDHP 144
Y +V+G+G+FG V + T + A+K + + D + E M + P
Sbjct: 70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 129
Query: 145 NVVSLKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICR 203
VV L + F +D+ YL +V+E++P + + +Y +P + + YT ++
Sbjct: 130 WVVQLFYAF-----QDDRYLYMVMEYMPGGDLVNLMSNYD-----VPEKWARFYTAEVVL 179
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVK----------GEPNISY 253
AL IH +G HRD+KP N+L++ H +KL DFG+ + K G P+
Sbjct: 180 ALDAIHS-MGFIHRDVKPDNMLLDKSGH-LKLADFGTCMKMNKEGMVRCDTAVGTPD--- 234
Query: 254 ICSRYYRAPELI---FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIK 308
Y +PE++ G Y D WSVG L E+L+G F +S V +I+
Sbjct: 235 -----YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMN 287
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 110/238 (46%), Gaps = 41/238 (17%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQ-------DKRYKNRELQTMRLLDHP 144
Y +V+G+G+FG V + T + A+K + + D + E M + P
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 145 NVVSLKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICR 203
VV L + F +D+ YL +V+E++P + + +Y +P + + YT ++
Sbjct: 135 WVVQLFYAF-----QDDRYLYMVMEYMPGGDLVNLMSNYD-----VPEKWARFYTAEVVL 184
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVK----------GEPNISY 253
AL IH +G HRD+KP N+L++ H +KL DFG+ + K G P+
Sbjct: 185 ALDAIHS-MGFIHRDVKPDNMLLDKSGH-LKLADFGTCMKMNKEGMVRCDTAVGTPD--- 239
Query: 254 ICSRYYRAPELI---FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIK 308
Y +PE++ G Y D WSVG L E+L+G F +S V +I+
Sbjct: 240 -----YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMN 292
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 16/198 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKR--YKN---RELQTMRLLDHPNVVSLKHCF 153
+G G+ G+VF+ +G +A K + + + +N RELQ + + P +V F
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100
Query: 154 FSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIG 213
+S + +++ +E + + + R+P + + + + L Y+
Sbjct: 101 YSDGE-----ISICMEHMDGGSL---DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 152
Query: 214 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTT 273
+ HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y +PE + G T Y+
Sbjct: 153 IMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-THYSV 209
Query: 274 AIDIWSVGCVLAELLLGQ 291
DIWS+G L E+ +G+
Sbjct: 210 QSDIWSMGLSLVEMAVGR 227
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 41/237 (17%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQ-------DKRYKNRELQTMRLLDHP 144
Y +V+G+G+FG V + T + A+K + + D + E M + P
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 145 NVVSLKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICR 203
VV L + F +D+ YL +V+E++P + + +Y +P + + YT ++
Sbjct: 135 WVVQLFYAF-----QDDRYLYMVMEYMPGGDLVNLMSNYD-----VPEKWARFYTAEVVL 184
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVK----------GEPNISY 253
AL IH +G HRD+KP N+L++ H +KL DFG+ + K G P+
Sbjct: 185 ALDAIHS-MGFIHRDVKPDNMLLDKSGH-LKLADFGTCMKMNKEGMVRCDTAVGTPD--- 239
Query: 254 ICSRYYRAPELI---FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 307
Y +PE++ G Y D WSVG L E+L+G F +S V +I+
Sbjct: 240 -----YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 110/215 (51%), Gaps = 18/215 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKR--YKN---RELQTMRLLDHPNVVSLKHCF 153
+G G+ G+VF+ +G +A K + + + +N RELQ + + P +V F
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 154 FSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+S + +++ +E + ++ +V K + R+P + + + + L Y+
Sbjct: 93 YSDGE-----ISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKH 143
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 272
+ HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y +PE + G T Y+
Sbjct: 144 KIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-THYS 200
Query: 273 TAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 307
DIWS+G L E+ +G+ SG + E++
Sbjct: 201 VQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELL 235
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 104/199 (52%), Gaps = 18/199 (9%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKR--YKN---RELQTMRLLDHPNVVSLKHCF 153
+G G+ G+VF+ +G +A K + + + +N RELQ + + P +V F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 154 FSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+S + +++ +E + ++ +V K + R+P + + + + L Y+
Sbjct: 74 YSDGE-----ISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 272
+ HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y +PE + G T Y+
Sbjct: 125 KIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-THYS 181
Query: 273 TAIDIWSVGCVLAELLLGQ 291
DIWS+G L E+ +G+
Sbjct: 182 VQSDIWSMGLSLVEMAVGR 200
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 104/199 (52%), Gaps = 18/199 (9%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKR--YKN---RELQTMRLLDHPNVVSLKHCF 153
+G G+ G+VF+ +G +A K + + + +N RELQ + + P +V F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 154 FSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+S + +++ +E + ++ +V K + R+P + + + + L Y+
Sbjct: 74 YSDGE-----ISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 272
+ HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y +PE + G T Y+
Sbjct: 125 KIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-THYS 181
Query: 273 TAIDIWSVGCVLAELLLGQ 291
DIWS+G L E+ +G+
Sbjct: 182 VQSDIWSMGLSLVEMAVGR 200
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 104/199 (52%), Gaps = 18/199 (9%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKR--YKN---RELQTMRLLDHPNVVSLKHCF 153
+G G+ G+VF+ +G +A K + + + +N RELQ + + P +V F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 154 FSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+S + +++ +E + ++ +V K + R+P + + + + L Y+
Sbjct: 74 YSDGE-----ISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 272
+ HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y +PE + G T Y+
Sbjct: 125 KIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-THYS 181
Query: 273 TAIDIWSVGCVLAELLLGQ 291
DIWS+G L E+ +G+
Sbjct: 182 VQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 104/199 (52%), Gaps = 18/199 (9%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKR--YKN---RELQTMRLLDHPNVVSLKHCF 153
+G G+ G+VF+ +G +A K + + + +N RELQ + + P +V F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 154 FSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+S + +++ +E + ++ +V K + R+P + + + + L Y+
Sbjct: 74 YSDGE-----ISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 272
+ HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y +PE + G T Y+
Sbjct: 125 KIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-THYS 181
Query: 273 TAIDIWSVGCVLAELLLGQ 291
DIWS+G L E+ +G+
Sbjct: 182 VQSDIWSMGLSLVEMAVGR 200
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 97/217 (44%), Gaps = 22/217 (10%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVL----QDKRYKNRELQTMRLLDHPNVVS 148
Y+ + +G+G F V + L G A+K++L QD+ RE RL +HPN++
Sbjct: 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILR 90
Query: 149 L-KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L +C K E +L L F T++ + + + ICR L
Sbjct: 91 LVAYCLRERGAKHEAWLLLPF-FKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEA 149
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGS---AKVLVKGEPNISYI-------CSR 257
IH G HRD+KP N+L+ V L D GS A + V+G + C+
Sbjct: 150 IHAK-GYAHRDLKPTNILLGDEGQPV-LMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 258 YYRAPELIFGATEYTTA---IDIWSVGCVLAELLLGQ 291
YRAPEL F + D+WS+GCVL ++ G+
Sbjct: 208 SYRAPEL-FSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 14/202 (6%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 152
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
FS D LY+ V+E+V + H R R + + Y QI Y+H +
Sbjct: 128 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHS-L 181
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 272
+ +RD+KP+NLL++ + +++ DFG AK VKG + + Y APE+I + Y
Sbjct: 182 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKG-ATWTLCGTPEYLAPEIIL-SKGYN 237
Query: 273 TAIDIWSVGCVLAELLLGQPLF 294
A+D W++G ++ E+ G P F
Sbjct: 238 KAVDWWALGVLIYEMAAGYPPF 259
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 152
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
FS D LY+ V+E+V + H R R + + Y QI Y+H +
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHS-L 160
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 271
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 161 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGY 215
Query: 272 TTAIDIWSVGCVLAELLLGQPLF 294
A+D W++G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 152
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
FS D LY+ V+E+V + H R R + + Y QI Y+H +
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHS-L 160
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 271
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 161 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGY 215
Query: 272 TTAIDIWSVGCVLAELLLGQPLF 294
A+D W++G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 152
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
FS D LY+ V+E+V + H R R + + Y QI Y+H +
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHS-L 160
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 271
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 161 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGY 215
Query: 272 TTAIDIWSVGCVLAELLLGQPLF 294
A+D W++G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 128/313 (40%), Gaps = 50/313 (15%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSLKH 151
+G+G F F+ +T E A K V + K + E+ R L H +VV H
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF-H 81
Query: 152 CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGG 211
FF D ++ +VLE + H R + P + Y QI Y+H
Sbjct: 82 GFFEDND----FVFVVLELCRRRSL-LELHKRRKALTEP--EARYYLRQIVLGCQYLHRN 134
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISYICSRYYRAPELIFGATE 270
V HRD+K NL +N +VK+ DFG A KV GE + Y APE +
Sbjct: 135 -RVIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE-VLSKKG 191
Query: 271 YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 330
++ +D+WS+GC++ LL+G+P F E C+ Y
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL---- 225
Query: 331 PQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNARLP-N 389
+IK + + K + P A L+ ++LQ P R T E FF P ARLP
Sbjct: 226 -RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP-ARLPIT 281
Query: 390 GRPFPPLFNFKPQ 402
PP F+ P
Sbjct: 282 CLTIPPRFSIAPS 294
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 152
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
FS D LY+ V+E+V + H R R + + Y QI Y+H +
Sbjct: 108 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHS-L 161
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 271
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 162 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGY 216
Query: 272 TTAIDIWSVGCVLAELLLGQPLF 294
A+D W++G ++ E+ G P F
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 152
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
FS D LY+ V+E+V + H R R + + Y QI Y+H +
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHS-L 160
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 271
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 161 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGY 215
Query: 272 TTAIDIWSVGCVLAELLLGQPLF 294
A+D W++G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 34/226 (15%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR----ELQTMRLLD-HPNVVSLKH 151
RV+ +G F V++A+ + +G A+K++L ++ KNR E+ M+ L HPN+V
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQF-- 91
Query: 152 CFFSTTDKDELYLNLVLEFVPETVY---RVAKHYSRASQRMPL---IYVKLYTYQICRAL 205
C ++ K+E EF+ T ++ + + R PL +K++ YQ CRA+
Sbjct: 92 CSAASIGKEESDTGQA-EFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIF-YQTCRAV 149
Query: 206 AYIHGGI-GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR------- 257
++H + HRD+K +NLL++ + +KLCDFGSA + P+ S+ R
Sbjct: 150 QHMHRQKPPIIHRDLKVENLLLS-NQGTIKLCDFGSATT-ISHYPDYSWSAQRRALVEEE 207
Query: 258 -------YYRAPELIFGATEYTTA--IDIWSVGCVLAELLLGQPLF 294
YR PE+I + + DIW++GC+L L Q F
Sbjct: 208 ITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF 253
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 152
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
FS D LY+ V+E+V + H R R + + Y QI Y+H +
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHS-L 160
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 271
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 161 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGY 215
Query: 272 TTAIDIWSVGCVLAELLLGQPLF 294
A+D W++G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 152
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
FS D LY+ V+E+V + H R R + + Y QI Y+H +
Sbjct: 128 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFXEPHARFYAAQIVLTFEYLHS-L 181
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 271
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 182 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGY 236
Query: 272 TTAIDIWSVGCVLAELLLGQPLF 294
A+D W++G ++ E+ G P F
Sbjct: 237 NKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 152
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
FS D LY+ V+E+V + H R R + + Y QI Y+H +
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFAEPHARFYAAQIVLTFEYLHS-L 160
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 271
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 161 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGY 215
Query: 272 TTAIDIWSVGCVLAELLLGQPLF 294
A+D W++G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 136/311 (43%), Gaps = 52/311 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDK--------RYKNRELQTMRLLDHP 144
Y +G G F V A + TGE VAIK + DK R K E++ ++ L H
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIK--IMDKNTLGSDLPRIKT-EIEALKNLRHQ 68
Query: 145 NVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRA 204
++ L H T +K + +VLE+ P Y + R+ ++ QI A
Sbjct: 69 HICQLYH-VLETANK----IFMVLEYCPGGELF---DYIISQDRLSEEETRVVFRQIVSA 120
Query: 205 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYIC-SRYYRAP 262
+AY+H G HRD+KP+NLL + + H++KL DFG AK + ++ C S Y AP
Sbjct: 121 VAYVHSQ-GYAHRDLKPENLLFDEY-HKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAP 178
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
ELI G + + D+WS+G +L L+ G P + D ++ + K K M
Sbjct: 179 ELIQGKSYLGSEADVWSMGILLYVLMCG--FLPFDD--DNVMALYK----------KIMR 224
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRD 382
Y K+ + P ++ L+ ++LQ P R + HP+ + +
Sbjct: 225 GKYDVPKW---------------LSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQDYN 269
Query: 383 PNARLPNGRPF 393
+ PF
Sbjct: 270 YPVEWQSKNPF 280
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 139/327 (42%), Gaps = 46/327 (14%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK---NRELQTMRLLDHPNVVSLKHCFFS 155
+G G+FG+ + ++ E VA+K + + ++ RE+ R L HPN+V K +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILT 86
Query: 156 TTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIG 213
T +L +V+E+ E R+ + R + + Q+ ++Y H +
Sbjct: 87 PT-----HLAIVMEYASGGELFERICN-----AGRFSEDEARFFFQQLISGVSYCHA-MQ 135
Query: 214 VCHRDIKPQNLLVNPH-THQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 272
VCHRD+K +N L++ ++K+CDFG +K V S + + Y APE++
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDG 195
Query: 273 TAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFP 331
D+WS G L +L+G P E + I ++L ++ P+Y
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILN------VQYAIPDYV----- 244
Query: 332 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNARLPNGR 391
+ PE L+SR+ P R + E H +F L++ A L N
Sbjct: 245 -------------HISPECRHLISRIFVADPAKRISIPEIRNHEWF--LKNLPADLMNDN 289
Query: 392 PFPPLFNFKPQELKGASKELLSKLIPE 418
F+ Q G S E + ++I E
Sbjct: 290 TMTTQFDESDQ--PGQSIEEIMQIIAE 314
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 14/202 (6%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 152
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
FS D LY+ V+E+V + H R R + + Y QI Y+H +
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHS-L 160
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 272
+ +RD+KP+NLL++ + +++ DFG AK VKG + Y APE+I + Y
Sbjct: 161 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR-TWXLAGTPEYLAPEIIL-SKGYN 216
Query: 273 TAIDIWSVGCVLAELLLGQPLF 294
A+D W++G ++ E+ G P F
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 152
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 93
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
FS D LY+ V+E+V + H R R + + Y QI Y+H +
Sbjct: 94 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHS-L 147
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 271
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 148 DLIYRDLKPENLLIDEQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGY 202
Query: 272 TTAIDIWSVGCVLAELLLGQPLF 294
A+D W++G ++ E+ G P F
Sbjct: 203 NKAVDWWALGVLIYEMAAGYPPF 225
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 152
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
FS D LY+ V+E+V + H R R + + Y QI Y+H +
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFXEPHARFYAAQIVLTFEYLHS-L 160
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 271
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 161 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGY 215
Query: 272 TTAIDIWSVGCVLAELLLGQPLF 294
A+D W++G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 14/202 (6%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 152
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
FS D LY+ V+E+V + H R R + + Y QI Y+H +
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHS-L 160
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 272
+ +RD+KP+NLL++ + +++ DFG AK VKG + Y APE+I + Y
Sbjct: 161 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR-TWXLXGTPEYLAPEIIL-SKGYN 216
Query: 273 TAIDIWSVGCVLAELLLGQPLF 294
A+D W++G ++ E+ G P F
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 152
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
FS D LY+ V+E+V + H R R + + Y QI Y+H +
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFXEPHARFYAAQIVLTFEYLHS-L 160
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 271
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 161 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGY 215
Query: 272 TTAIDIWSVGCVLAELLLGQPLF 294
A+D W++G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 152
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 101
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
FS D LY+ V+E+V + H R R + + Y QI Y+H +
Sbjct: 102 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFXEPHARFYAAQIVLTFEYLHS-L 155
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 271
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 156 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGY 210
Query: 272 TTAIDIWSVGCVLAELLLGQPLF 294
A+D W++G ++ E+ G P F
Sbjct: 211 NKAVDWWALGVLIYEMAAGYPPF 233
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 15/202 (7%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS-- 155
++G G FG VF+AK G+T IK+V + RE++ + LDH N+V C+
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFD 77
Query: 156 ----TTDKDELY-----LNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALA 206
T+ K+ L + +EF + R + ++ ++L+ QI + +
Sbjct: 78 YDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFE-QITKGVD 136
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 266
YIH + +RD+KP N+ + T QVK+ DFG L + Y +PE I
Sbjct: 137 YIHSK-KLINRDLKPSNIFL-VDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQI- 193
Query: 267 GATEYTTAIDIWSVGCVLAELL 288
+ +Y +D++++G +LAELL
Sbjct: 194 SSQDYGKEVDLYALGLILAELL 215
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 138/327 (42%), Gaps = 46/327 (14%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK---NRELQTMRLLDHPNVVSLKHCFFS 155
+G G+FG+ + ++ E VA+K + + ++ RE+ R L HPN+V K +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 156 TTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIG 213
T +L +V+E+ E R+ + R + + Q+ ++Y H +
Sbjct: 86 PT-----HLAIVMEYASGGELFERICN-----AGRFSEDEARFFFQQLISGVSYCHA-MQ 134
Query: 214 VCHRDIKPQNLLVNPH-THQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 272
VCHRD+K +N L++ ++K+CDFG +K V S + + Y APE++
Sbjct: 135 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDG 194
Query: 273 TAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFP 331
D+WS G L +L+G P E + I ++L ++ P+Y
Sbjct: 195 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILN------VQYAIPDYV----- 243
Query: 332 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNARLPNGR 391
+ PE L+SR+ P R + E H +F L++ A L N
Sbjct: 244 -------------HISPECRHLISRIFVADPAKRISIPEIRNHEWF--LKNLPADLMNDN 288
Query: 392 PFPPLFNFKPQELKGASKELLSKLIPE 418
F Q G S E + ++I E
Sbjct: 289 TMTTQFAASDQ--PGQSIEEIMQIIAE 313
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 152
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
FS D LY+ V+E+V + H R R + + Y QI Y+H +
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFXEPHARFYAAQIVLTFEYLHS-L 160
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 271
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 161 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGY 215
Query: 272 TTAIDIWSVGCVLAELLLGQPLF 294
A+D W++G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 25/233 (10%)
Query: 85 GQPKQTISYMAER-----VVGQGSFGIVFQAKCLETGETVAIKKVLQDK--------RYK 131
G T S++++R ++G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR 60
Query: 132 NRELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPL 191
RE Q L+HP +V++ + T L +V+E+V R H
Sbjct: 61 -REAQNAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 192 IYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 251
I V C+AL + H G+ HRD+KP N+L++ T+ VK+ DFG A+ + ++
Sbjct: 119 IEV---IADACQALNFSHQN-GIIHRDVKPANILISA-TNAVKVVDFGIARAIADSGNSV 173
Query: 252 ----SYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGV 300
+ I + Y +PE G + + D++S+GCVL E+L G+P F G+S V
Sbjct: 174 XQTAAVIGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 134/304 (44%), Gaps = 60/304 (19%)
Query: 90 TISYMAERVVGQGSFGIV-----------FQAKCLETGETVAIKKVLQDKRYKNRELQTM 138
T Y +G+G+F +V + AK + T + A +D + RE +
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSA-----RDHQKLEREARIC 84
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVL--EFVPETVYRVAKHYSRASQRMPLIYVKL 196
RLL HPN+V L H S L +LV E + V R ++YS A +
Sbjct: 85 RLLKHPNIVRL-HDSISEEGFHYLVFDLVTGGELFEDIVAR--EYYSEADASHCI----- 136
Query: 197 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPN--IS 252
+QI ++ +IH + HRD+KP+NLL+ VKL DFG A + V+GE
Sbjct: 137 --HQILESVNHIHQH-DIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFG 192
Query: 253 YICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 312
+ + Y +PE + Y +DIW+ G +L LL+G P F E +L + IK
Sbjct: 193 FAGTPGYLSPE-VLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQ-HKLYQQIKA--- 247
Query: 313 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
+ FP + W + PEA +L++++L +P R TA +A
Sbjct: 248 -------------GAYDFP---SPEWDTV-----TPEAKNLINQMLTINPAKRITADQAL 286
Query: 373 IHPF 376
HP+
Sbjct: 287 KHPW 290
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 135/296 (45%), Gaps = 47/296 (15%)
Query: 91 ISYMAERVVGQGSFGIVFQAKCLE-TGETVAIKKVLQDKRYKNRELQTMR-LLDHPNVVS 148
+S + R V + + G F K +E T E ++ +++ + + RE +R + HP++++
Sbjct: 106 VSSVVRRCVHRAT-GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIIT 164
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIY--VKLYTYQICRALA 206
L + S++ ++ LV + + R + + ++++ L + + A++
Sbjct: 165 LIDSYESSS-----FMFLVFDLM-----RKGELFDYLTEKVALSEKETRSIMRSLLEAVS 214
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 266
++H + HRD+KP+N+L++ + Q++L DFG + L GE + Y APE++
Sbjct: 215 FLHAN-NIVHRDLKPENILLDDNM-QIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILK 272
Query: 267 GATE-----YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 321
+ + Y +D+W+ G +L LL G P F + L I M
Sbjct: 273 CSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMI--------------M 318
Query: 322 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
Y +F P+ W DL+SRLLQ P R TA +A HPFF
Sbjct: 319 EGQY-QFSSPE-----WDD-----RSSTVKDLISRLLQVDPEARLTAEQALQHPFF 363
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 23/220 (10%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQ-------TMRLLDHPNVVSLK 150
V+G+GSFG V A T E AIK + +D ++ +++ + LLD P ++
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 151 HCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
H F T D+ L V+E+V + +Y + + + + + Y +I L ++
Sbjct: 86 HSCFQTVDR----LYFVMEYVNGGDLMYHI-QQVGKFKEPQAVFYAA----EISIGLFFL 136
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKV-LVKGEPNISYICSRYYRAPELIFG 267
H G+ +RD+K N++++ H +K+ DFG K ++ G + + Y APE+I
Sbjct: 137 HKR-GIIYRDLKLDNVMLDSEGH-IKIADFGMCKEHMMDGVTTREFCGTPDYIAPEII-A 193
Query: 268 ATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 307
Y ++D W+ G +L E+L GQP F GE D+L + I
Sbjct: 194 YQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE-DELFQSI 232
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 152
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
FS D LY+ V+E+V + H R R + + Y QI Y+H +
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHS-L 160
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 271
+ +RD+KP+NL+++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 161 DLIYRDLKPENLIIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIII-SKGY 215
Query: 272 TTAIDIWSVGCVLAELLLGQPLF 294
A+D W++G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 152
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
FS D LY +V+E+V + H R R + + Y QI Y+H +
Sbjct: 107 EFSFKDNSNLY--MVMEYVAGG--EMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH-SL 160
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 271
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y
Sbjct: 161 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGY 215
Query: 272 TTAIDIWSVGCVLAELLLGQPLF 294
A+D W++G ++ ++ G P F
Sbjct: 216 NKAVDWWALGVLIYQMAAGYPPF 238
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 103/199 (51%), Gaps = 18/199 (9%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKR--YKN---RELQTMRLLDHPNVVSLKHCF 153
+G G+ G+VF+ +G +A K + + + +N RELQ + + P +V F
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 154 FSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+S + +++ +E + ++ +V K + R+P + + + + L Y+
Sbjct: 77 YSDGE-----ISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKH 127
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 272
+ HRD+KP N+LVN ++KLCDFG + L+ N ++ +R Y +PE + G T Y+
Sbjct: 128 KIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDEMAN-EFVGTRSYMSPERLQG-THYS 184
Query: 273 TAIDIWSVGCVLAELLLGQ 291
DIWS+G L E+ +G+
Sbjct: 185 VQSDIWSMGLSLVEMAVGR 203
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 45/297 (15%)
Query: 90 TISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTM-RLLDHPNVVS 148
T Y + +G GS+ + + T A+K + + KR E++ + R HPN+++
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIIT 80
Query: 149 LKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALA 206
LK + D Y+ +V E + E + ++ + + + + + I + +
Sbjct: 81 LKDVY-----DDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVL-----FTITKTVE 130
Query: 207 YIHGGIGVCHRDIKPQNLLV-----NPHTHQVKLCDFGSAKVLVKGEPNISYIC-SRYYR 260
Y+H GV HRD+KP N+L NP + +++CDFG AK L + C + +
Sbjct: 131 YLHAQ-GVVHRDLKPSNILYVDESGNPES--IRICDFGFAKQLRAENGLLMTPCYTANFV 187
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 320
APE + Y A DIWS+G +L +L G F D EI+ +G+
Sbjct: 188 APE-VLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD-DTPEEILARIGSG------- 238
Query: 321 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
KF + W+ + A DLVS++L P+ R TA HP+
Sbjct: 239 --------KF-SLSGGYWNSV-----SDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 111/233 (47%), Gaps = 25/233 (10%)
Query: 85 GQPKQTISYMAER-----VVGQGSFGIVFQAKCLETGETVAIKKVLQDK--------RYK 131
G T S++++R ++G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR 60
Query: 132 NRELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPL 191
RE Q L+HP +V++ + T L +V+E+V R H
Sbjct: 61 -REAQNAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 192 IYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 251
I V C+AL + H G+ HRD+KP N++++ T+ VK+ DFG A+ + ++
Sbjct: 119 IEV---IADACQALNFSHQN-GIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSV 173
Query: 252 S----YICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGV 300
+ I + Y +PE G + + D++S+GCVL E+L G+P F G+S V
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 128/305 (41%), Gaps = 49/305 (16%)
Query: 84 NGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTM----- 138
N K + +Y + +G+G+F +V + TG A K++ K+ R+ Q +
Sbjct: 22 NASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFA-AKIINTKKLSARDFQKLEREAR 80
Query: 139 --RLLDHPNVVSLKHCFFSTTDKDELYLNLVL--EFVPETVYRVAKHYSRASQRMPLIYV 194
R L HPN+V L H L +LV E + V R + YS A +
Sbjct: 81 ICRKLQHPNIVRL-HDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCI--- 134
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPNIS 252
QI ++AY H G+ HR++KP+NLL+ VKL DFG A + E
Sbjct: 135 ----QQILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG 189
Query: 253 YICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 312
+ + Y +PE + Y+ +DIW+ G +L LL+G P F E +L IK
Sbjct: 190 FAGTPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-HRLYAQIKA--- 244
Query: 313 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
+ +P + W + PEA L+ +L +P R TA +A
Sbjct: 245 -------------GAYDYPSPE---WDTV-----TPEAKSLIDSMLTVNPKKRITADQAL 283
Query: 373 IHPFF 377
P+
Sbjct: 284 KVPWI 288
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 140/338 (41%), Gaps = 75/338 (22%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN---------RELQTMRLLDHPNVVS 148
V+G+G+F +V + ETG+ A+K V K + RE +L HP++V
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 149 LKHCF---------FSTTDKDELYLNLVLEFVPETVYR--VAKHYSRASQRMPLIYVKLY 197
L + F D +L +V VY VA HY R
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR------------- 137
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLV--NPHTHQVKLCDFGSAKVLVKGEPNI---S 252
QI AL Y H + HRD+KP+N+L+ ++ VKL DFG A L GE +
Sbjct: 138 --QILEALRYCHDN-NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL--GESGLVAGG 192
Query: 253 YICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 312
+ + ++ APE++ Y +D+W G +L LL G F G ++L E I
Sbjct: 193 RVGTPHFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGI----- 244
Query: 313 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
+ + K MNP W I A DLV R+L P R T EA
Sbjct: 245 -IKGKYK-MNPR------------QWSHI-----SESAKDLVRRMLMLDPAERITVYEAL 285
Query: 373 IHPFFYELRDPNA---RLPNGRPFPPLFNFKPQELKGA 407
HP+ E RD A LP FN + ++LKGA
Sbjct: 286 NHPWLKE-RDRYAYKIHLPETVEQLRKFNAR-RKLKGA 321
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 25/231 (10%)
Query: 85 GQPKQTISYMAER-----VVGQGSFGIVFQAKCLETGETVAIKKVLQDK--------RYK 131
G T S++++R ++G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR 60
Query: 132 NRELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPL 191
RE Q L+HP +V++ + T L +V+E+V R H
Sbjct: 61 -REAQNAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 192 IYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 251
I V C+AL + H G+ HRD+KP N++++ T+ VK+ DFG A+ + ++
Sbjct: 119 IEV---IADACQALNFSHQN-GIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSV 173
Query: 252 S----YICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGES 298
+ I + Y +PE G + D++S+GCVL E+L G+P F G+S
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 22/216 (10%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDH 143
+Y + +G+G+F V A+ + TG+ VA+K + DK N RE++ ++L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIXKVLNH 72
Query: 144 PNVVSLKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQIC 202
PN+V L + E L LV E+ V+ + R ++ + QI
Sbjct: 73 PNIVKLFEVI-----ETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR----QIV 123
Query: 203 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
A+ Y H + HRD+K +NLL++ + +K+ DFG + G ++ + Y AP
Sbjct: 124 SAVQYCHQKF-IVHRDLKAENLLLDADXN-IKIADFGFSNEFTFGNKLDAFCGAPPYAAP 181
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGES 298
EL G +D+WS+G +L L+ G F G++
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 113/228 (49%), Gaps = 28/228 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRL--------LDHPNVVS 148
RV+G+GS+ V + +T A+K V ++ + ++ ++ +HP +V
Sbjct: 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 74
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
L CF + E L V+E+V + H R +++P + + Y+ +I AL Y+
Sbjct: 75 LHSCF-----QTESRLFFVIEYVNGG--DLMFHMQR-QRKLPEEHARFYSAEISLALNYL 126
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFG 267
H G+ +RD+K N+L++ H +KL D+G K ++ S C Y APE++ G
Sbjct: 127 HER-GIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG 184
Query: 268 ATEYTTAIDIWSVGCVLAELLLGQPLF--------PGESGVDQLVEII 307
+Y ++D W++G ++ E++ G+ F P ++ D L ++I
Sbjct: 185 E-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 231
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 111/233 (47%), Gaps = 25/233 (10%)
Query: 85 GQPKQTISYMAER-----VVGQGSFGIVFQAKCLETGETVAIKKVLQDK--------RYK 131
G T S++++R ++G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR 60
Query: 132 NRELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPL 191
RE Q L+HP +V++ + T L +V+E+V R H
Sbjct: 61 -REAQNAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 192 IYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 251
I V C+AL + H G+ HRD+KP N++++ T+ VK+ DFG A+ + ++
Sbjct: 119 IEV---IADACQALNFSHQN-GIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSV 173
Query: 252 S----YICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGV 300
+ I + Y +PE G + + D++S+GCVL E+L G+P F G+S V
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 115/228 (50%), Gaps = 28/228 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNREL---QTMRLL-----DHPNVVS 148
RV+G+GS+ V + +T A+K V ++ + ++ QT + + +HP +V
Sbjct: 11 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 70
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
L CF + E L V+E+V + H R +++P + + Y+ +I AL Y+
Sbjct: 71 LHSCF-----QTESRLFFVIEYVNGG--DLMFHMQR-QRKLPEEHARFYSAEISLALNYL 122
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFG 267
H G+ +RD+K N+L++ H +KL D+G K ++ S C Y APE++ G
Sbjct: 123 HER-GIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG 180
Query: 268 ATEYTTAIDIWSVGCVLAELLLGQPLF--------PGESGVDQLVEII 307
+Y ++D W++G ++ E++ G+ F P ++ D L ++I
Sbjct: 181 E-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 227
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 115/228 (50%), Gaps = 28/228 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNREL---QTMRLL-----DHPNVVS 148
RV+G+GS+ V + +T A+K V ++ + ++ QT + + +HP +V
Sbjct: 26 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 85
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
L CF + E L V+E+V + H R +++P + + Y+ +I AL Y+
Sbjct: 86 LHSCF-----QTESRLFFVIEYVNGG--DLMFHMQR-QRKLPEEHARFYSAEISLALNYL 137
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFG 267
H G+ +RD+K N+L++ H +KL D+G K ++ S C Y APE++ G
Sbjct: 138 HER-GIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG 195
Query: 268 ATEYTTAIDIWSVGCVLAELLLGQPLF--------PGESGVDQLVEII 307
+Y ++D W++G ++ E++ G+ F P ++ D L ++I
Sbjct: 196 E-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 242
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 147/328 (44%), Gaps = 51/328 (15%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-------RELQTM 138
QP ++ RV+G+G FG V + TG+ A KK+ + + K E Q +
Sbjct: 179 QPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL 238
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYT 198
++ VVSL + + + KD L L L L + + + Y P Y
Sbjct: 239 EKVNSRFVVSLAYAYET---KDALCLVLTLMNGGDLKFHI---YHMGQAGFPEARAVFYA 292
Query: 199 YQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY 258
+IC L +H + +RD+KP+N+L++ H H +++ D G A + +G+ + +
Sbjct: 293 AEICCGLEDLHRE-RIVYRDLKPENILLDDHGH-IRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 259 YRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 318
Y APE++ YT + D W++GC+L E++ GQ F Q + IK REE+
Sbjct: 351 YMAPEVV-KNERYTFSPDWWALGCLLYEMIAGQSPF------QQRKKKIK------REEV 397
Query: 319 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRC-----TALEACI 373
+ + +K P + + +R P+A L S+LL P R +A E
Sbjct: 398 ERL-----------VKEVP--EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444
Query: 374 HPFFYELRDPNARLPNGRPFPPLFNFKP 401
HP F +L RL G PP FKP
Sbjct: 445 HPLFKKLN--FKRLGAGMLEPP---FKP 467
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 142/324 (43%), Gaps = 68/324 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQD----------KRYKNRELQTMRLLDHPNV 146
+++G+G+FG V + TG A+K + ++ ++R LQ R HP +
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR---HPFL 72
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRA 204
+LK+ F T D+ L V+E+ E + +++ +R + Y +I A
Sbjct: 73 TALKYAF-QTHDR----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSA 122
Query: 205 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPE 263
L Y+H V +RDIK +NL+++ H +K+ DFG K + + C Y APE
Sbjct: 123 LEYLHSR-DVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEYLAPE 180
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 323
+ +Y A+D W +G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 181 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR---- 228
Query: 324 NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLR-----CTALEACIHPFFY 378
F + + PEA L++ LL+ P R A E H FF
Sbjct: 229 ------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 270
Query: 379 ELRDPNARLPNGRPFPPLFNFKPQ 402
+ + + + PP FKPQ
Sbjct: 271 SINWQD--VVQKKLLPP---FKPQ 289
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 142/324 (43%), Gaps = 68/324 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQD----------KRYKNRELQTMRLLDHPNV 146
+++G+G+FG V + TG A+K + ++ ++R LQ R HP +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR---HPFL 67
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRA 204
+LK+ F T D+ L V+E+ E + +++ +R + Y +I A
Sbjct: 68 TALKYAF-QTHDR----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSA 117
Query: 205 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPE 263
L Y+H V +RDIK +NL+++ H +K+ DFG K + + C Y APE
Sbjct: 118 LEYLHSR-DVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 323
+ +Y A+D W +G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 176 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR---- 223
Query: 324 NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLR-----CTALEACIHPFFY 378
F + + PEA L++ LL+ P R A E H FF
Sbjct: 224 ------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265
Query: 379 ELRDPNARLPNGRPFPPLFNFKPQ 402
+ + + + PP FKPQ
Sbjct: 266 SINWQD--VVQKKLLPP---FKPQ 284
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 16/203 (7%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 152
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
FS D LY+ V+E+V + H R R + + Y QI Y+H +
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHS-L 160
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 271
+ +RD+KP+NLL++ + +++ DFG AK VKG +C Y AP +I + Y
Sbjct: 161 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPAIIL-SKGY 215
Query: 272 TTAIDIWSVGCVLAELLLGQPLF 294
A+D W++G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 111/233 (47%), Gaps = 25/233 (10%)
Query: 85 GQPKQTISYMAER-----VVGQGSFGIVFQAKCLETGETVAIKKVLQDK--------RYK 131
G T S++++R ++G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR 60
Query: 132 NRELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPL 191
RE Q L+HP +V++ + T L +V+E+V R H
Sbjct: 61 -REAQNAAALNHPAIVAVYATGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 192 IYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 251
I V C+AL + H G+ HRD+KP N++++ T+ VK+ DFG A+ + ++
Sbjct: 119 IEV---IADACQALNFSHQN-GIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSV 173
Query: 252 S----YICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGV 300
+ I + Y +PE G + + D++S+GCVL E+L G+P F G+S V
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 116/228 (50%), Gaps = 28/228 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVA---IKKVLQDKRYKNRELQTMRLL-----DHPNVVS 148
RV+G+GS+ V + +T A +KK L + +QT + + +HP +V
Sbjct: 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 117
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
L CF + E L V+E+V + H R +++P + + Y+ +I AL Y+
Sbjct: 118 LHSCF-----QTESRLFFVIEYVNGG--DLMFHMQR-QRKLPEEHARFYSAEISLALNYL 169
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVK-GEPNISYICSRYYRAPELIFG 267
H G+ +RD+K N+L++ H +KL D+G K ++ G+ ++ + Y APE++ G
Sbjct: 170 HER-GIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRG 227
Query: 268 ATEYTTAIDIWSVGCVLAELLLGQPLF--------PGESGVDQLVEII 307
+Y ++D W++G ++ E++ G+ F P ++ D L ++I
Sbjct: 228 E-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 274
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 111/233 (47%), Gaps = 25/233 (10%)
Query: 85 GQPKQTISYMAER-----VVGQGSFGIVFQAKCLETGETVAIKKVLQDK--------RYK 131
G T S++++R ++G G V A+ L VA+K + D R++
Sbjct: 18 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR 77
Query: 132 NRELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPL 191
RE Q L+HP +V++ + T L +V+E+V R H
Sbjct: 78 -REAQNAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRA 135
Query: 192 IYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 251
I V C+AL + H G+ HRD+KP N++++ T+ VK+ DFG A+ + ++
Sbjct: 136 IEV---IADACQALNFSHQN-GIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSV 190
Query: 252 S----YICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGV 300
+ I + Y +PE G + + D++S+GCVL E+L G+P F G+S V
Sbjct: 191 TQTAAVIGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 242
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 128/292 (43%), Gaps = 43/292 (14%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTM-RLLDHPNVVSLKH 151
Y+ + +G GS+ + T A+K + + KR + E++ + R HPN+++LK
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKD 88
Query: 152 CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGG 211
+ D +YL L E + ++ + + + + + I + + Y+H
Sbjct: 89 VY---DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVL-----HTIGKTVEYLHSQ 140
Query: 212 IGVCHRDIKPQNLLV-----NPHTHQVKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELI 265
GV HRD+KP N+L NP +++CDFG AK L + C + + APE +
Sbjct: 141 -GVVHRDLKPSNILYVDESGNPEC--LRICDFGFAKQLRAENGLLMTPCYTANFVAPE-V 196
Query: 266 FGATEYTTAIDIWSVGCVLAELLLG-QPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 324
Y DIWS+G +L +L G P G S D EI+ +G+
Sbjct: 197 LKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPS--DTPEEILTRIGSG----------- 243
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
KF + W+ + A DLVS++L P+ R TA + HP+
Sbjct: 244 ----KF-TLSGGNWNTV-----SETAKDLVSKMLHVDPHQRLTAKQVLQHPW 285
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 147/328 (44%), Gaps = 51/328 (15%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-------RELQTM 138
QP ++ RV+G+G FG V + TG+ A KK+ + + K E Q +
Sbjct: 179 QPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL 238
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYT 198
++ VVSL + + + KD L L L L + + + Y P Y
Sbjct: 239 EKVNSRFVVSLAYAYET---KDALCLVLTLMNGGDLKFHI---YHMGQAGFPEARAVFYA 292
Query: 199 YQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY 258
+IC L +H + +RD+KP+N+L++ H H +++ D G A + +G+ + +
Sbjct: 293 AEICCGLEDLHRE-RIVYRDLKPENILLDDHGH-IRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 259 YRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 318
Y APE++ YT + D W++GC+L E++ GQ F Q + IK REE+
Sbjct: 351 YMAPEVV-KNERYTFSPDWWALGCLLYEMIAGQSPF------QQRKKKIK------REEV 397
Query: 319 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRC-----TALEACI 373
+ + +K P + + +R P+A L S+LL P R +A E
Sbjct: 398 ERL-----------VKEVP--EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444
Query: 374 HPFFYELRDPNARLPNGRPFPPLFNFKP 401
HP F +L RL G PP FKP
Sbjct: 445 HPLFKKLN--FKRLGAGMLEPP---FKP 467
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 28/215 (13%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS-- 155
++G G FG VF+AK G+T I++V + RE++ + LDH N+V C+
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFD 78
Query: 156 ---TTDKDELY-------------------LNLVLEFVPETVYRVAKHYSRASQRMPLIY 193
T D L L + +EF + R + ++
Sbjct: 79 YDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA 138
Query: 194 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 253
++L+ QI + + YIH + HRD+KP N+ + T QVK+ DFG L
Sbjct: 139 LELFE-QITKGVDYIHSK-KLIHRDLKPSNIFL-VDTKQVKIGDFGLVTSLKNDGKRTRS 195
Query: 254 ICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELL 288
+ Y +PE I + +Y +D++++G +LAELL
Sbjct: 196 KGTLRYMSPEQI-SSQDYGKEVDLYALGLILAELL 229
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 128/292 (43%), Gaps = 43/292 (14%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTM-RLLDHPNVVSLKH 151
Y+ + +G GS+ + T A+K + + KR + E++ + R HPN+++LK
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKD 88
Query: 152 CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGG 211
+ D +YL L E + ++ + + + + + I + + Y+H
Sbjct: 89 VY---DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVL-----HTIGKTVEYLHSQ 140
Query: 212 IGVCHRDIKPQNLLV-----NPHTHQVKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELI 265
GV HRD+KP N+L NP +++CDFG AK L + C + + APE +
Sbjct: 141 -GVVHRDLKPSNILYVDESGNPEC--LRICDFGFAKQLRAENGLLMTPCYTANFVAPE-V 196
Query: 266 FGATEYTTAIDIWSVGCVLAELLLG-QPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 324
Y DIWS+G +L +L G P G S D EI+ +G+
Sbjct: 197 LKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPS--DTPEEILTRIGSG----------- 243
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
KF + W+ + A DLVS++L P+ R TA + HP+
Sbjct: 244 ----KFT-LSGGNWNTV-----SETAKDLVSKMLHVDPHQRLTAKQVLQHPW 285
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 142/324 (43%), Gaps = 68/324 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQD----------KRYKNRELQTMRLLDHPNV 146
+++G+G+FG V + TG A+K + ++ ++R LQ R HP +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR---HPFL 67
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRA 204
+LK+ F T D+ L V+E+ E + +++ +R + Y +I A
Sbjct: 68 TALKYAF-QTHDR----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSA 117
Query: 205 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPE 263
L Y+H V +RDIK +NL+++ H +K+ DFG K + + C Y APE
Sbjct: 118 LEYLHSR-DVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 323
+ +Y A+D W +G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 176 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR---- 223
Query: 324 NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLR-----CTALEACIHPFFY 378
F + + PEA L++ LL+ P R A E H FF
Sbjct: 224 ------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265
Query: 379 ELRDPNARLPNGRPFPPLFNFKPQ 402
+ + + + PP FKPQ
Sbjct: 266 SINWQD--VVQKKLLPP---FKPQ 284
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 24/226 (10%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDHPNV 146
Y+ + +G+GSFG K E G IK++ +++ RE+ + + HPN+
Sbjct: 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNI 85
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIY----VKLYTYQIC 202
V + F + LY+ V+++ + R + + +++ + + QIC
Sbjct: 86 VQYRESF---EENGSLYI--VMDYCEG-----GDLFKRINAQKGVLFQEDQILDWFVQIC 135
Query: 203 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-EPNISYICSRYYRA 261
AL ++H + HRDIK QN+ + V+L DFG A+VL E + I + YY +
Sbjct: 136 LALKHVHDR-KILHRDIKSQNIFLTKDG-TVQLGDFGIARVLNSTVELARACIGTPYYLS 193
Query: 262 PELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 307
PE I Y DIW++GCVL EL + F S + +++II
Sbjct: 194 PE-ICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKII 238
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 142/324 (43%), Gaps = 68/324 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQD----------KRYKNRELQTMRLLDHPNV 146
+++G+G+FG V + TG A+K + ++ ++R LQ R HP +
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR---HPFL 70
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRA 204
+LK+ F T D+ L V+E+ E + +++ +R + Y +I A
Sbjct: 71 TALKYAF-QTHDR----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSA 120
Query: 205 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPE 263
L Y+H V +RDIK +NL+++ H +K+ DFG K + + C Y APE
Sbjct: 121 LEYLHSR-DVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTFCGTPEYLAPE 178
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 323
+ +Y A+D W +G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 179 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR---- 226
Query: 324 NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLR-----CTALEACIHPFFY 378
F + + PEA L++ LL+ P R A E H FF
Sbjct: 227 ------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 268
Query: 379 ELRDPNARLPNGRPFPPLFNFKPQ 402
+ + + + PP FKPQ
Sbjct: 269 SINWQD--VVQKKLLPP---FKPQ 287
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 142/324 (43%), Gaps = 68/324 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQD----------KRYKNRELQTMRLLDHPNV 146
+++G+G+FG V + TG A+K + ++ ++R LQ R HP +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR---HPFL 67
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRA 204
+LK+ F T D+ L V+E+ E + +++ +R + Y +I A
Sbjct: 68 TALKYAF-QTHDR----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSA 117
Query: 205 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPE 263
L Y+H V +RDIK +NL+++ H +K+ DFG K + + C Y APE
Sbjct: 118 LEYLHSR-DVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 323
+ +Y A+D W +G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 176 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR---- 223
Query: 324 NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLR-----CTALEACIHPFFY 378
F + + PEA L++ LL+ P R A E H FF
Sbjct: 224 ------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265
Query: 379 ELRDPNARLPNGRPFPPLFNFKPQ 402
+ + + + PP FKPQ
Sbjct: 266 SINWQD--VVQKKLLPP---FKPQ 284
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 121/287 (42%), Gaps = 44/287 (15%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK---NRELQTMRLLDHPNVVSLKHCFFS 155
+G G+FG+ + T E VA+K + + RE+ R L HPN+V K +
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILT 87
Query: 156 TTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIG 213
T +L +++E+ E R+ + R + + Q+ ++Y H +
Sbjct: 88 PT-----HLAIIMEYASGGELYERICN-----AGRFSEDEARFFFQQLLSGVSYCHS-MQ 136
Query: 214 VCHRDIKPQNLLVNPH-THQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 272
+CHRD+K +N L++ ++K+CDFG +K V S + + Y APE++ EY
Sbjct: 137 ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL-RQEYD 195
Query: 273 TAI-DIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 330
I D+WS G L +L+G P E D I ++L ++
Sbjct: 196 GKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILS--------------VKYSI 241
Query: 331 PQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
P R+ PE L+SR+ P R + E H +F
Sbjct: 242 PD----------DIRISPECCHLISRIFVADPATRISIPEIKTHSWF 278
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 142/324 (43%), Gaps = 68/324 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQD----------KRYKNRELQTMRLLDHPNV 146
+++G+G+FG V + TG A+K + ++ ++R LQ R HP +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR---HPFL 67
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRA 204
+LK+ F T D+ L V+E+ E + +++ +R + Y +I A
Sbjct: 68 TALKYAF-QTHDR----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSA 117
Query: 205 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPE 263
L Y+H V +RDIK +NL+++ H +K+ DFG K + + C Y APE
Sbjct: 118 LEYLHSR-DVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTFCGTPEYLAPE 175
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 323
+ +Y A+D W +G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 176 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR---- 223
Query: 324 NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLR-----CTALEACIHPFFY 378
F + + PEA L++ LL+ P R A E H FF
Sbjct: 224 ------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265
Query: 379 ELRDPNARLPNGRPFPPLFNFKPQ 402
+ + + + PP FKPQ
Sbjct: 266 SINWQD--VVQKKLLPP---FKPQ 284
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 142/324 (43%), Gaps = 68/324 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQD----------KRYKNRELQTMRLLDHPNV 146
+++G+G+FG V + TG A+K + ++ ++R LQ R HP +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR---HPFL 67
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRA 204
+LK+ F T D+ L V+E+ E + +++ +R + Y +I A
Sbjct: 68 TALKYAF-QTHDR----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSA 117
Query: 205 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPE 263
L Y+H V +RDIK +NL+++ H +K+ DFG K + + C Y APE
Sbjct: 118 LEYLHSR-DVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTFCGTPEYLAPE 175
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 323
+ +Y A+D W +G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 176 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR---- 223
Query: 324 NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLR-----CTALEACIHPFFY 378
F + + PEA L++ LL+ P R A E H FF
Sbjct: 224 ------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265
Query: 379 ELRDPNARLPNGRPFPPLFNFKPQ 402
+ + + + PP FKPQ
Sbjct: 266 SINWQD--VVQKKLLPP---FKPQ 284
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 138/327 (42%), Gaps = 46/327 (14%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK---NRELQTMRLLDHPNVVSLKHCFFS 155
+G G+FG+ + ++ E VA+K + + ++ RE+ R L HPN+V K +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 156 TTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIG 213
T +L +V+E+ E R+ + R + + Q+ ++Y H +
Sbjct: 87 PT-----HLAIVMEYASGGELFERICN-----AGRFSEDEARFFFQQLISGVSYCHA-MQ 135
Query: 214 VCHRDIKPQNLLVNPH-THQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 272
VCHRD+K +N L++ ++K+C FG +K V S + + Y APE++
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDG 195
Query: 273 TAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFP 331
D+WS G L +L+G P E + I ++L ++ P+Y
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILN------VQYAIPDYV----- 244
Query: 332 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNARLPNGR 391
+ PE L+SR+ P R + E H +F L++ A L N
Sbjct: 245 -------------HISPECRHLISRIFVADPAKRISIPEIRNHEWF--LKNLPADLMNDN 289
Query: 392 PFPPLFNFKPQELKGASKELLSKLIPE 418
F+ Q G S E + ++I E
Sbjct: 290 TMTTQFDESDQ--PGQSIEEIMQIIAE 314
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 16/203 (7%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLLDHPNVVSLKHC 152
+ +G GSFG V K E+G A+K + + K K ++ L R+L N L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
FS D LY+ V+E+V + H R R + + Y QI Y+H +
Sbjct: 107 EFSFKDNSNLYM--VMEYVAGG--EMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHS-L 160
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 271
+ +RD+KP+NLL++ + +++ DFG AK VKG +C APE+I + Y
Sbjct: 161 DLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEALAPEIIL-SKGY 215
Query: 272 TTAIDIWSVGCVLAELLLGQPLF 294
A+D W++G ++ E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 149/356 (41%), Gaps = 75/356 (21%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKC-LETG--ETVAIKKVLQDKR--YKNRELQTMRLL 141
P+ + + E +G+G+F V+ A L+ G E +A+K ++ ELQ + +
Sbjct: 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVA 76
Query: 142 D-HPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQ 200
NV+ +K+CF + V+ +P Y + + + V+ Y
Sbjct: 77 GGQDNVMGVKYCFRKN--------DHVVIAMP---YLEHESFLDILNSLSFQEVREYMLN 125
Query: 201 ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK----------VLVKGEP- 249
+ +AL IH G+ HRD+KP N L N + L DFG A+ V+ E
Sbjct: 126 LFKALKRIHQ-FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQ 184
Query: 250 ------NISYIC-SRY-----------YRAPELIFGATEYTTAIDIWSVGCVLAELLLGQ 291
N IC SR +RAPE++ TTAID+WS G + LL G+
Sbjct: 185 QERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244
Query: 292 -PLFPGESGVDQLVEIIKVLGT--------------------PTR------EEIKCMNPN 324
P + + L +I+ + G+ P + E ++ M+ +
Sbjct: 245 YPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSS 304
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYEL 380
+ I+ H + +P EA DL+ +LL +P R TA EA +HPFF ++
Sbjct: 305 TPKLT-SDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM 359
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 142/347 (40%), Gaps = 56/347 (16%)
Query: 90 TISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTM-RLLDHPNVVS 148
T Y + +G GS+ + + T A+K + + KR E++ + R HPN+++
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQHPNIIT 80
Query: 149 LKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALA 206
LK + D Y+ +V E E + ++ + + + + L+T I + +
Sbjct: 81 LKDVY-----DDGKYVYVVTELXKGGELLDKILRQKFFSEREASAV---LFT--ITKTVE 130
Query: 207 YIHGGIGVCHRDIKPQNLLV-----NPHTHQVKLCDFGSAKVLVKGEPNISYIC-SRYYR 260
Y+H GV HRD+KP N+L NP + +++CDFG AK L + C + +
Sbjct: 131 YLHAQ-GVVHRDLKPSNILYVDESGNPES--IRICDFGFAKQLRAENGLLXTPCYTANFV 187
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 320
APE + Y A DIWS+G +L L G F D EI+ +G+
Sbjct: 188 APE-VLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPD-DTPEEILARIGSG------- 238
Query: 321 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYEL 380
KF + W+ + A DLVS+ L P+ R TA HP+
Sbjct: 239 --------KF-SLSGGYWNSV-----SDTAKDLVSKXLHVDPHQRLTAALVLRHPWIVHW 284
Query: 381 RDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCPFL 427
N + P L +KGA S L R Q P L
Sbjct: 285 DQLPQYQLNRQDAPHL-------VKGAXAATYSAL----NRNQSPVL 320
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 126/281 (44%), Gaps = 48/281 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVVSLKH 151
+ +G+G++G V A T E VA+K V + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK--- 68
Query: 152 CFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
F+ + + L LE+ E R+ MP + + +Q+ + Y+H
Sbjct: 69 -FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLH 121
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV--KGEPNISYICSRY-YRAPELIF 266
G IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 122 G-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
+ +D+WS G VL +L G+ P + D E Y+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YS 218
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 367
++K + +PW KI + L+ ++L +P+ R T
Sbjct: 219 DWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARIT 254
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 102/210 (48%), Gaps = 29/210 (13%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVL----QDKRYKNRELQTMRLLDHPNVVSLKHCF 153
V+G+G FG + ETGE + +K+++ + +R +E++ MR L+HPNV+ F
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLK----F 72
Query: 154 FSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIG 213
KD+ LN + E++ R + P + I +AY+H +
Sbjct: 73 IGVLYKDK-RLNFITEYIKGGTLRGI--IKSMDSQYPWSQRVSFAKDIASGMAYLH-SMN 128
Query: 214 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV--KGEP-------------NISYICSRY 258
+ HRD+ N LV + + V + DFG A+++V K +P + + + Y
Sbjct: 129 IIHRDLNSHNCLVRENKNVV-VADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY 187
Query: 259 YRAPELIFGATEYTTAIDIWSVGCVLAELL 288
+ APE+I G + Y +D++S G VL E++
Sbjct: 188 WMAPEMINGRS-YDEKVDVFSFGIVLCEII 216
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 127/300 (42%), Gaps = 49/300 (16%)
Query: 88 KQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTM-------RL 140
K + +Y + +G+G+F +V + TG A K++ K+ R+ Q + R
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFA-AKIINTKKLSARDFQKLEREARICRK 61
Query: 141 LDHPNVVSLKHCFFSTTDKDELYLNLVL--EFVPETVYRVAKHYSRASQRMPLIYVKLYT 198
L HPN+V L H L +LV E + V R + YS A +
Sbjct: 62 LQHPNIVRL-HDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCI------- 111
Query: 199 YQICRALAYIHGGIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPNISYICS 256
QI ++AY H G+ HR++KP+NLL+ VKL DFG A + E + +
Sbjct: 112 QQILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGT 170
Query: 257 RYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 316
Y +PE + Y+ +DIW+ G +L LL+G P F E +L IK
Sbjct: 171 PGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-HRLYAQIKA------- 221
Query: 317 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ +P + W + PEA L+ +L +P R TA +A P+
Sbjct: 222 ---------GAYDYPSPE---WDTV-----TPEAKSLIDSMLTVNPKKRITADQALKVPW 264
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 137/327 (41%), Gaps = 46/327 (14%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK---NRELQTMRLLDHPNVVSLKHCFFS 155
+G G+FG+ + ++ E VA+K + + ++ RE+ R L HPN+V K +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 156 TTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIG 213
T +L +V+E+ E R+ + R + + Q+ ++Y H +
Sbjct: 87 PT-----HLAIVMEYASGGELFERICN-----AGRFSEDEARFFFQQLISGVSYCHA-MQ 135
Query: 214 VCHRDIKPQNLLVNPH-THQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 272
VCHRD+K +N L++ ++K+C FG +K V + + Y APE++
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDG 195
Query: 273 TAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFP 331
D+WS G L +L+G P E + I ++L ++ P+Y
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILN------VQYAIPDYV----- 244
Query: 332 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNARLPNGR 391
+ PE L+SR+ P R + E H +F L++ A L N
Sbjct: 245 -------------HISPECRHLISRIFVADPAKRISIPEIRNHEWF--LKNLPADLMNDN 289
Query: 392 PFPPLFNFKPQELKGASKELLSKLIPE 418
F+ Q G S E + ++I E
Sbjct: 290 TMTTQFDESDQ--PGQSIEEIMQIIAE 314
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 129/282 (45%), Gaps = 50/282 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 150
+ +G+G++G V A T E VA+K ++ KR + +E+ ++L+H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 69
Query: 151 HCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F+ + + L LE+ E R+ MP + + +Q+ + Y+
Sbjct: 70 --FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYL 121
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV--KGEPNISYICSRY-YRAPELI 265
HG IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 122 HG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 325
+ +D+WS G VL +L G+ P + D E Y
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------Y 218
Query: 326 TEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 367
+++K + +PW KI + L+ ++L +P+ R T
Sbjct: 219 SDWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARIT 255
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 129/282 (45%), Gaps = 50/282 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 150
+ +G+G++G V A T E VA+K ++ KR + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 151 HCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F+ + + L LE+ E R+ MP + + +Q+ + Y+
Sbjct: 69 --FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYL 120
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV--KGEPNISYICSRY-YRAPELI 265
HG IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 121 HG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 325
+ +D+WS G VL +L G+ P + D E Y
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------Y 217
Query: 326 TEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 367
+++K + +PW KI + L+ ++L +P+ R T
Sbjct: 218 SDWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARIT 254
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 127/301 (42%), Gaps = 49/301 (16%)
Query: 88 KQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTM-------RL 140
K + +Y + +G+G+F +V + TG A K++ K+ R+ Q + R
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFA-AKIINTKKLSARDFQKLEREARICRK 60
Query: 141 LDHPNVVSLKHCFFSTTDKDELYLNLVL--EFVPETVYRVAKHYSRASQRMPLIYVKLYT 198
L HPN+V L H L +LV E + V R + YS A +
Sbjct: 61 LQHPNIVRL-HDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCI------- 110
Query: 199 YQICRALAYIHGGIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPNISYICS 256
QI ++AY H G+ HR++KP+NLL+ VKL DFG A + E + +
Sbjct: 111 QQILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGT 169
Query: 257 RYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 316
Y +PE + Y+ +DIW+ G +L LL+G P F E +L IK
Sbjct: 170 PGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-HRLYAQIKA------- 220
Query: 317 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ +P + W + PEA L+ +L +P R TA +A P+
Sbjct: 221 ---------GAYDYPSPE---WDTV-----TPEAKSLIDSMLTVNPKKRITADQALKVPW 263
Query: 377 F 377
Sbjct: 264 I 264
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 126/281 (44%), Gaps = 48/281 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVVSLKH 151
+ +G+G++G V A T E VA+K V + +E+ ++L+H NVV
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK--- 67
Query: 152 CFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
F+ + + L LE+ E R+ MP + + +Q+ + Y+H
Sbjct: 68 -FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLH 120
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV--KGEPNISYICSRY-YRAPELIF 266
G IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 121 G-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
+ +D+WS G VL +L G+ P + D E Y+
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YS 217
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 367
++K + +PW KI + L+ ++L +P+ R T
Sbjct: 218 DWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARIT 253
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 127/301 (42%), Gaps = 49/301 (16%)
Query: 88 KQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTM-------RL 140
K + +Y + +G+G+F +V + TG A K++ K+ R+ Q + R
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFA-AKIINTKKLSARDFQKLEREARICRK 61
Query: 141 LDHPNVVSLKHCFFSTTDKDELYLNLVL--EFVPETVYRVAKHYSRASQRMPLIYVKLYT 198
L HPN+V L H L +LV E + V R + YS A +
Sbjct: 62 LQHPNIVRL-HDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCI------- 111
Query: 199 YQICRALAYIHGGIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPNISYICS 256
QI ++AY H G+ HR++KP+NLL+ VKL DFG A + E + +
Sbjct: 112 QQILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGT 170
Query: 257 RYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 316
Y +PE + Y+ +DIW+ G +L LL+G P F E +L IK
Sbjct: 171 PGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-HRLYAQIKA------- 221
Query: 317 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ +P + W + PEA L+ +L +P R TA +A P+
Sbjct: 222 ---------GAYDYPSPE---WDTV-----TPEAKSLIDSMLTVNPKKRITADQALKVPW 264
Query: 377 F 377
Sbjct: 265 I 265
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 126/281 (44%), Gaps = 48/281 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVVSLKH 151
+ +G+G++G V A T E VA+K V + +E+ ++L+H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK--- 69
Query: 152 CFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
F+ + + L LE+ E R+ MP + + +Q+ + Y+H
Sbjct: 70 -FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLH 122
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV--KGEPNISYICSRY-YRAPELIF 266
G IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 123 G-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
+ +D+WS G VL +L G+ P + D E Y+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YS 219
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 367
++K + +PW KI + L+ ++L +P+ R T
Sbjct: 220 DWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARIT 255
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 126/281 (44%), Gaps = 48/281 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVVSLKH 151
+ +G+G++G V A T E VA+K V + +E+ ++L+H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK--- 69
Query: 152 CFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
F+ + + L LE+ E R+ MP + + +Q+ + Y+H
Sbjct: 70 -FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLH 122
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV--KGEPNISYICSRY-YRAPELIF 266
G IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 123 G-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
+ +D+WS G VL +L G+ P + D E Y+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YS 219
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 367
++K + +PW KI + L+ ++L +P+ R T
Sbjct: 220 DWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARIT 255
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 126/281 (44%), Gaps = 48/281 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVVSLKH 151
+ +G+G++G V A T E VA+K V + +E+ ++L+H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK--- 69
Query: 152 CFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
F+ + + L LE+ E R+ MP + + +Q+ + Y+H
Sbjct: 70 -FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLH 122
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV--KGEPNISYICSRY-YRAPELIF 266
G IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 123 G-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
+ +D+WS G VL +L G+ P + D E Y+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YS 219
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 367
++K + +PW KI + L+ ++L +P+ R T
Sbjct: 220 DWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARIT 255
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 26/205 (12%)
Query: 99 VGQGSFGIV----FQAKCLETGETVAIKKVLQD----KRYKNRELQTMRLLDHPNVVSLK 150
+G+G+FG V + TG VA+K++ +R RE+Q ++ L +V +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 151 HCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
+ + L LV+E++P R RA R+ + LY+ QIC+ + Y+ G
Sbjct: 78 GVSYGPGRQS---LRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYL-G 131
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL-------VKGEPNISYICSRYYRAPE 263
HRD+ +N+LV H VK+ DFG AK+L V EP S I ++ APE
Sbjct: 132 SRRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPI---FWYAPE 187
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
+ ++ D+WS G VL EL
Sbjct: 188 SL-SDNIFSRQSDVWSFGVVLYELF 211
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-------RELQTMRLLDHPNVVSLKH 151
+G G V+ A+ VAIK + R K RE+ L H N+VS+
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM-- 76
Query: 152 CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGG 211
++D+ Y LV+E++ Y + + + +T QI + + H
Sbjct: 77 --IDVDEEDDCYY-LVMEYIEGPTL---SEYIESHGPLSVDTAINFTNQILDGIKHAHD- 129
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS----YICSRYYRAPELIFG 267
+ + HRDIKPQN+L++ + +K+ DFG AK L E +++ + + Y +PE G
Sbjct: 130 MRIVHRDIKPQNILIDSNK-TLKIFDFGIAKAL--SETSLTQTNHVLGTVQYFSPEQAKG 186
Query: 268 -ATEYTTAIDIWSVGCVLAELLLGQPLFPGESGV 300
AT+ T DI+S+G VL E+L+G+P F GE+ V
Sbjct: 187 EATDECT--DIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 105/221 (47%), Gaps = 24/221 (10%)
Query: 83 RNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR-----ELQT 137
R+ P + + E +G G+FG V++AK ETG +A KV++ K + E++
Sbjct: 5 RDLDPNEVWEIVGE--LGDGAFGKVYKAKNKETG-ALAAAKVIETKSEEELEDYIVEIEI 61
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKL 196
+ DHP +V L ++ L +++EF P V + R P I V
Sbjct: 62 LATCDHPYIVKLLGAYYHDGK-----LWIMIEFCPGGAVDAIMLELDRGLTE-PQIQV-- 113
Query: 197 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYIC 255
Q+ AL ++H + HRD+K N+L+ ++L DFG SAK L + S+I
Sbjct: 114 VCRQMLEALNFLHSK-RIIHRDLKAGNVLMTLEG-DIRLADFGVSAKNLKTLQKRDSFIG 171
Query: 256 SRYYRAPELI----FGATEYTTAIDIWSVGCVLAELLLGQP 292
+ Y+ APE++ T Y DIWS+G L E+ +P
Sbjct: 172 TPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEP 212
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 129/282 (45%), Gaps = 50/282 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 150
+ +G+G++G V A T E VA+K ++ KR + +E+ ++L+H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 69
Query: 151 HCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F+ + + L LE+ E R+ MP + + +Q+ + Y+
Sbjct: 70 --FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYL 121
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELI 265
HG IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 122 HG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 325
+ +D+WS G VL +L G+ P + D E Y
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------Y 218
Query: 326 TEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 367
+++K + +PW KI + L+ ++L +P+ R T
Sbjct: 219 SDWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARIT 255
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 129/282 (45%), Gaps = 50/282 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 150
+ +G+G++G V A T E VA+K ++ KR + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 151 HCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F+ + + L LE+ E R+ MP + + +Q+ + Y+
Sbjct: 69 --FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYL 120
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV--KGEPNISYICSRY-YRAPELI 265
HG IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 121 HG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 325
+ +D+WS G VL +L G+ P + D E Y
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------Y 217
Query: 326 TEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 367
+++K + +PW KI + L+ ++L +P+ R T
Sbjct: 218 SDWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARIT 254
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 26/205 (12%)
Query: 99 VGQGSFGIV----FQAKCLETGETVAIKKVLQD----KRYKNRELQTMRLLDHPNVVSLK 150
+G+G+FG V + TG VA+K++ +R RE+Q ++ L +V +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 151 HCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
+ + L LV+E++P R RA R+ + LY+ QIC+ + Y+ G
Sbjct: 79 GVSYGPGRQS---LRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYL-G 132
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL-------VKGEPNISYICSRYYRAPE 263
HRD+ +N+LV H VK+ DFG AK+L V EP S I ++ APE
Sbjct: 133 SRRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPI---FWYAPE 188
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
+ ++ D+WS G VL EL
Sbjct: 189 SL-SDNIFSRQSDVWSFGVVLYELF 212
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 124/250 (49%), Gaps = 22/250 (8%)
Query: 85 GQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKV-LQDKRYKN---RELQTMRL 140
G PK+ Y +GQG+ G V+ A + TG+ VAI+++ LQ + K E+ MR
Sbjct: 16 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73
Query: 141 LDHPNVVSLKHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTY 199
+PN+V+ + DEL+ +V+E++ ++ V ++ +
Sbjct: 74 NKNPNIVNYLDSYLV---GDELW--VVMEYLAGGSLTDVVTETCMDEGQIAAV-----CR 123
Query: 200 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYICSRY 258
+ +AL ++H V HRDIK N+L+ VKL DFG A++ + + + + Y
Sbjct: 124 ECLQALEFLHSN-QVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSTMVGTPY 181
Query: 259 YRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 318
+ APE++ Y +DIWS+G + E++ G+P + E+ + L +I GTP +
Sbjct: 182 WMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNP 239
Query: 319 KCMNPNYTEF 328
+ ++ + +F
Sbjct: 240 EKLSAIFRDF 249
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 26/205 (12%)
Query: 99 VGQGSFGIV----FQAKCLETGETVAIKKVLQD----KRYKNRELQTMRLLDHPNVVSLK 150
+G+G+FG V + TG VA+K++ +R RE+Q ++ L +V +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 151 HCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
+ + L LV+E++P R RA R+ + LY+ QIC+ + Y+ G
Sbjct: 91 GVSYGPGRQS---LRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYL-G 144
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL-------VKGEPNISYICSRYYRAPE 263
HRD+ +N+LV H VK+ DFG AK+L V EP S I ++ APE
Sbjct: 145 SRRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPI---FWYAPE 200
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
+ ++ D+WS G VL EL
Sbjct: 201 SL-SDNIFSRQSDVWSFGVVLYELF 224
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 126/281 (44%), Gaps = 48/281 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVVSLKH 151
+ +G+G++G V A T E VA+K V + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK--- 68
Query: 152 CFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
F+ + + L LE+ E R+ MP + + +Q+ + Y+H
Sbjct: 69 -FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLH 121
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIF 266
G IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 122 G-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
+ +D+WS G VL +L G+ P + D E Y+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YS 218
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 367
++K + +PW KI + L+ ++L +P+ R T
Sbjct: 219 DWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARIT 254
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 126/281 (44%), Gaps = 48/281 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVVSLKH 151
+ +G+G++G V A T E VA+K V + +E+ ++L+H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK--- 69
Query: 152 CFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
F+ + + L LE+ E R+ MP + + +Q+ + Y+H
Sbjct: 70 -FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLH 122
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIF 266
G IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 123 G-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
+ +D+WS G VL +L G+ P + D E Y+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YS 219
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 367
++K + +PW KI + L+ ++L +P+ R T
Sbjct: 220 DWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARIT 255
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 105/221 (47%), Gaps = 24/221 (10%)
Query: 83 RNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR-----ELQT 137
R+ P + + E +G G+FG V++AK ETG +A KV++ K + E++
Sbjct: 13 RDLDPNEVWEIVGE--LGDGAFGKVYKAKNKETG-ALAAAKVIETKSEEELEDYIVEIEI 69
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKL 196
+ DHP +V L ++ L +++EF P V + R P I V
Sbjct: 70 LATCDHPYIVKLLGAYYHDGK-----LWIMIEFCPGGAVDAIMLELDRGLTE-PQIQV-- 121
Query: 197 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYIC 255
Q+ AL ++H + HRD+K N+L+ ++L DFG SAK L + S+I
Sbjct: 122 VCRQMLEALNFLHSK-RIIHRDLKAGNVLMTLEG-DIRLADFGVSAKNLKTLQKRDSFIG 179
Query: 256 SRYYRAPELI----FGATEYTTAIDIWSVGCVLAELLLGQP 292
+ Y+ APE++ T Y DIWS+G L E+ +P
Sbjct: 180 TPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEP 220
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 126/281 (44%), Gaps = 48/281 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVVSLKH 151
+ +G+G++G V A T E VA+K V + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK--- 68
Query: 152 CFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
F+ + + L LE+ E R+ MP + + +Q+ + Y+H
Sbjct: 69 -FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLH 121
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIF 266
G IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 122 G-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
+ +D+WS G VL +L G+ P + D E Y+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YS 218
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 367
++K + +PW KI + L+ ++L +P+ R T
Sbjct: 219 DWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARIT 254
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 126/281 (44%), Gaps = 48/281 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVVSLKH 151
+ +G+G++G V A T E VA+K V + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK--- 68
Query: 152 CFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
F+ + + L LE+ E R+ MP + + +Q+ + Y+H
Sbjct: 69 -FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLH 121
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIF 266
G IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 122 G-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
+ +D+WS G VL +L G+ P + D E Y+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YS 218
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 367
++K + +PW KI + L+ ++L +P+ R T
Sbjct: 219 DWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARIT 254
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 126/281 (44%), Gaps = 48/281 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVVSLKH 151
+ +G+G++G V A T E VA+K V + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK--- 68
Query: 152 CFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
F+ + + L LE+ E R+ MP + + +Q+ + Y+H
Sbjct: 69 -FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLH 121
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIF 266
G IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 122 G-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
+ +D+WS G VL +L G+ P + D E Y+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YS 218
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 367
++K + +PW KI + L+ ++L +P+ R T
Sbjct: 219 DWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARIT 254
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 122/306 (39%), Gaps = 40/306 (13%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----RELQTMRLLDHPNV 146
Y + V+G G+ +V A C E VAIK++ +K + +E+Q M HPN+
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 75
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIY----VKLYTYQIC 202
VS F KDEL+L + L +V + KH + + + ++
Sbjct: 76 VSYYTSFVV---KDELWLVMKL-LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 203 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG------EPNISYICS 256
L Y+H G HRD+K N+L+ V++ DFG + L G + +++ +
Sbjct: 132 EGLEYLHKN-GQIHRDVKAGNILLG-EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 257 RYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 316
+ APE++ Y DIWS G EL G P V ++ + P
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAA--PYHKYPPMKVLMLTLQNDP--- 244
Query: 317 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
P ++ K K+ ++S LQ P R TA E H F
Sbjct: 245 --------------PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKF 290
Query: 377 FYELRD 382
F + ++
Sbjct: 291 FQKAKN 296
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 26/205 (12%)
Query: 99 VGQGSFGIV----FQAKCLETGETVAIKKVLQD----KRYKNRELQTMRLLDHPNVVSLK 150
+G+G+FG V + TG VA+K++ +R RE+Q ++ L +V +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 151 HCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
+ + L LV+E++P R RA R+ + LY+ QIC+ + Y+ G
Sbjct: 75 GVSYGPGRPE---LRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYL-G 128
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL-------VKGEPNISYICSRYYRAPE 263
HRD+ +N+LV H VK+ DFG AK+L V EP S I ++ APE
Sbjct: 129 SRRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDXXVVREPGQSPI---FWYAPE 184
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
+ ++ D+WS G VL EL
Sbjct: 185 SL-SDNIFSRQSDVWSFGVVLYELF 208
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 108/223 (48%), Gaps = 32/223 (14%)
Query: 96 ERVVGQGSFGIVFQAKCLETGETVAIKKVLQD------KRYKN--RELQTMRLLDHPNVV 147
E ++G G FG V++A G+ VA+K D + +N +E + +L HPN++
Sbjct: 12 EEIIGIGGFGKVYRA--FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPET-VYRVAKHYSRASQRMPLIYVKLYTYQICRALA 206
+L+ E L LV+EF + RV + +R+P + + QI R +
Sbjct: 70 ALRGVCLK-----EPNLCLVMEFARGGPLNRVL-----SGKRIPPDILVNWAVQIARGMN 119
Query: 207 YIH--GGIGVCHRDIKPQNLLV-------NPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
Y+H + + HRD+K N+L+ + +K+ DFG A+ + +S +
Sbjct: 120 YLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR-TTKMSAAGAY 178
Query: 258 YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGV 300
+ APE+I A+ ++ D+WS G +L ELL G+ F G G+
Sbjct: 179 AWMAPEVI-RASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL 220
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 21/205 (10%)
Query: 97 RVVGQGSFGIV----FQAKCLETGETVAIKKVLQDKRYKN-----RELQTMRLLDHPNVV 147
R +G+G FG V + + TGE VA+K + + + +E++ +R L H N+V
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
K T+ + L++EF+P + ++ + ++ L Y QIC+ + Y
Sbjct: 87 KYKGI---CTEDGGNGIKLIMEFLPSG--SLKEYLPKNKNKINLKQQLKYAVQICKGMDY 141
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR----YYRAPE 263
+ G HRD+ +N+LV HQVK+ DFG K + + + R ++ APE
Sbjct: 142 L-GSRQYVHRDLAARNVLVESE-HQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPE 199
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
+ +++ A D+WS G L ELL
Sbjct: 200 CLM-QSKFYIASDVWSFGVTLHELL 223
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 22/250 (8%)
Query: 85 GQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKV-LQDKRYKN---RELQTMRL 140
G PK+ Y +GQG+ G V+ A + TG+ VAI+++ LQ + K E+ MR
Sbjct: 16 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73
Query: 141 LDHPNVVSLKHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTY 199
+PN+V+ + DEL+ +V+E++ ++ V ++ +
Sbjct: 74 NKNPNIVNYLDSYLVG---DELW--VVMEYLAGGSLTDVVTETCMDEGQIAAV-----CR 123
Query: 200 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYICSRY 258
+ +AL ++H V HRDIK N+L+ VKL DFG A++ + + + Y
Sbjct: 124 ECLQALEFLHSN-QVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSEMVGTPY 181
Query: 259 YRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 318
+ APE++ Y +DIWS+G + E++ G+P + E+ + L +I GTP +
Sbjct: 182 WMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNP 239
Query: 319 KCMNPNYTEF 328
+ ++ + +F
Sbjct: 240 EKLSAIFRDF 249
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 22/250 (8%)
Query: 85 GQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKV-LQDKRYKN---RELQTMRL 140
G PK+ Y +GQG+ G V+ A + TG+ VAI+++ LQ + K E+ MR
Sbjct: 17 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 74
Query: 141 LDHPNVVSLKHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTY 199
+PN+V+ + DEL+ +V+E++ ++ V ++ +
Sbjct: 75 NKNPNIVNYLDSYLVG---DELW--VVMEYLAGGSLTDVVTETCMDEGQIAAV-----CR 124
Query: 200 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYICSRY 258
+ +AL ++H V HRDIK N+L+ VKL DFG A++ + + + Y
Sbjct: 125 ECLQALEFLHSN-QVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSXMVGTPY 182
Query: 259 YRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 318
+ APE++ Y +DIWS+G + E++ G+P + E+ + L +I GTP +
Sbjct: 183 WMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNP 240
Query: 319 KCMNPNYTEF 328
+ ++ + +F
Sbjct: 241 EKLSAIFRDF 250
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 121/271 (44%), Gaps = 47/271 (17%)
Query: 116 GETVAIKKVLQDKRYKNRELQTMRLLD-HPNVVSLKHCFFSTTDKDELYLNLVLEFVPET 174
G + + ++V + + +E+ +R + HPN++ LK + + T + LV + +
Sbjct: 55 GGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT-----FFFLVFDLM--- 106
Query: 175 VYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI---GVCHRDIKPQNLLVNPHTH 231
+ + + ++++ L + T +I RAL + + + HRD+KP+N+L++ +
Sbjct: 107 --KKGELFDYLTEKVTL--SEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN 162
Query: 232 QVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE-----YTTAIDIWSVGCVLAE 286
+KL DFG + L GE S + Y APE+I + Y +D+WS G ++
Sbjct: 163 -IKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT 221
Query: 287 LLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRM 346
LL G P F + L I M+ NY +F P+ W
Sbjct: 222 LLAGSPPFWHRKQMLMLRMI--------------MSGNY-QFGSPE-----WDD-----Y 256
Query: 347 PPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
DLVSR L P R TA EA HPFF
Sbjct: 257 SDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 22/250 (8%)
Query: 85 GQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKV-LQDKRYKN---RELQTMRL 140
G PK+ Y +GQG+ G V+ A + TG+ VAI+++ LQ + K E+ MR
Sbjct: 16 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73
Query: 141 LDHPNVVSLKHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTY 199
+PN+V+ + DEL+ +V+E++ ++ V ++ +
Sbjct: 74 NKNPNIVNYLDSYLVG---DELW--VVMEYLAGGSLTDVVTETCMDEGQIAAV-----CR 123
Query: 200 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYICSRY 258
+ +AL ++H V HRDIK N+L+ VKL DFG A++ + + + Y
Sbjct: 124 ECLQALEFLHSN-QVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSXMVGTPY 181
Query: 259 YRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 318
+ APE++ Y +DIWS+G + E++ G+P + E+ + L +I GTP +
Sbjct: 182 WMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNP 239
Query: 319 KCMNPNYTEF 328
+ ++ + +F
Sbjct: 240 EKLSAIFRDF 249
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 136/310 (43%), Gaps = 54/310 (17%)
Query: 94 MAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN----RELQTM-RLLDHPNVVS 148
+ ++G+G++ V A L+ G+ A+K + + + RE++T+ + + N++
Sbjct: 16 LTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILE 75
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPETVY----RVAKHYS-RASQRMPLIYVKLYTYQICR 203
L F +D+ LV E + + KH++ R + R+ +
Sbjct: 76 LIEFF-----EDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRV--------VRDVAA 122
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNP--HTHQVKLCDF--GSAKVLVKG-----EPNISYI 254
AL ++H G+ HRD+KP+N+L VK+CDF GS L P ++
Sbjct: 123 ALDFLHTK-GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTP 181
Query: 255 C-SRYYRAPELI----FGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVD---QLVEI 306
C S Y APE++ AT Y D+WS+G VL +L G P F G G D E+
Sbjct: 182 CGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEV 241
Query: 307 IKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRC 366
+V E I+ +++FP W I EA DL+S+LL R
Sbjct: 242 CRVCQNKLFESIQ-----EGKYEFPD---KDWAHI-----SSEAKDLISKLLVRDAKQRL 288
Query: 367 TALEACIHPF 376
+A + HP+
Sbjct: 289 SAAQVLQHPW 298
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 21/205 (10%)
Query: 97 RVVGQGSFGIV----FQAKCLETGETVAIKKVLQDKRYKN-----RELQTMRLLDHPNVV 147
R +G+G FG V + + TGE VA+K + + + +E++ +R L H N+V
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 74
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
K T+ + L++EF+P + ++ + ++ L Y QIC+ + Y
Sbjct: 75 KYKGI---CTEDGGNGIKLIMEFLPSG--SLKEYLPKNKNKINLKQQLKYAVQICKGMDY 129
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR----YYRAPE 263
+ G HRD+ +N+LV HQVK+ DFG K + + + R ++ APE
Sbjct: 130 L-GSRQYVHRDLAARNVLVESE-HQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPE 187
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
+ +++ A D+WS G L ELL
Sbjct: 188 CLM-QSKFYIASDVWSFGVTLHELL 211
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 21/214 (9%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----RELQTMRLLDHPNV 146
Y + V+G G+ +V A C E VAIK++ +K + +E+Q M HPN+
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 70
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIY----VKLYTYQIC 202
VS F KDEL+L + L +V + KH + + + ++
Sbjct: 71 VSYYTSFVV---KDELWLVMKL-LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 203 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG------EPNISYICS 256
L Y+H G HRD+K N+L+ V++ DFG + L G + +++ +
Sbjct: 127 EGLEYLHKN-GQIHRDVKAGNILLG-EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 257 RYYRAPELIFGATEYTTAIDIWSVGCVLAELLLG 290
+ APE++ Y DIWS G EL G
Sbjct: 185 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 137/329 (41%), Gaps = 50/329 (15%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK---NRELQTMRLLDHPNVVSLKHCFFS 155
+G G+FG+ + + E VA+K + + ++ RE+ R L HPN+V K +
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 156 TTDKDELYLNLVLEFVP--ETVYRV--AKHYSRASQRMPLIYVKLYTYQICRALAYIHGG 211
T +L +V+E+ E R+ A +S R + Q+ ++Y H
Sbjct: 87 PT-----HLAIVMEYASGGELFERICNAGRFSEDEAR-------FFFQQLISGVSYAHA- 133
Query: 212 IGVCHRDIKPQNLLVNPH-THQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 270
+ V HRD+K +N L++ ++K+ DFG +K V S + + Y APE++
Sbjct: 134 MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEY 193
Query: 271 YTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 329
D+WS G L +L+G P E + I ++L ++ P+Y
Sbjct: 194 DGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILN------VQYAIPDYV--- 244
Query: 330 FPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPNARLPN 389
+ PE L+SR+ P R + E H +F L++ A L N
Sbjct: 245 ---------------HISPECRHLISRIFVADPAKRISIPEIRNHEWF--LKNLPADLMN 287
Query: 390 GRPFPPLFNFKPQELKGASKELLSKLIPE 418
F+ Q G S E + ++I E
Sbjct: 288 DNTMTTQFDESDQ--PGQSIEEIMQIIAE 314
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 128/284 (45%), Gaps = 54/284 (19%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 150
+ +G+G++G V A T E VA+K ++ KR + +E+ ++L+H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENVVK-- 69
Query: 151 HCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F+ + + L LE+ E R+ MP + + +Q+ + Y+
Sbjct: 70 --FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYL 121
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-----YRAPE 263
HG IG+ HRDIKP+NLL++ + +K+ DFG A V N + ++ Y APE
Sbjct: 122 HG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYN--NRERLLNKMXGTLPYVAPE 177
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 323
L+ + +D+WS G VL +L G+ P + D E
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------------ 217
Query: 324 NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 367
Y+++K + +PW KI + L+ ++L +P+ R T
Sbjct: 218 -YSDWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARIT 255
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 103/209 (49%), Gaps = 31/209 (14%)
Query: 97 RVVGQGSFGIVFQAKCLE-----TGETVAIKKVLQDKRYKNR-----ELQTMRLLDHPNV 146
R +G+G FG V C + TGE VA+K + D ++R E+ +R L H ++
Sbjct: 37 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI 95
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALA 206
+ K C D L LV+E+VP R + R S + L + L+ QIC +A
Sbjct: 96 IKYKGC---CEDAGAASLQLVMEYVPLGSLR--DYLPRHS--IGLAQLLLFAQQICEGMA 148
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYY 259
Y+H + HRD+ +N+L++ + VK+ DFG AK + +G E S + ++
Sbjct: 149 YLHAQHYI-HRDLAARNVLLD-NDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPV---FW 203
Query: 260 RAPELIFGATEYTTAIDIWSVGCVLAELL 288
APE + ++ A D+WS G L ELL
Sbjct: 204 YAPECL-KEYKFYYASDVWSFGVTLYELL 231
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 128/284 (45%), Gaps = 54/284 (19%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 150
+ +G+G++G V A T E VA+K ++ KR + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENVVK-- 68
Query: 151 HCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F+ + + L LE+ E R+ MP + + +Q+ + Y+
Sbjct: 69 --FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYL 120
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-----YRAPE 263
HG IG+ HRDIKP+NLL++ + +K+ DFG A V N + ++ Y APE
Sbjct: 121 HG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYN--NRERLLNKMXGTLPYVAPE 176
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 323
L+ + +D+WS G VL +L G+ P + D E
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------------ 216
Query: 324 NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 367
Y+++K + +PW KI + L+ ++L +P+ R T
Sbjct: 217 -YSDWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARIT 254
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 125/281 (44%), Gaps = 48/281 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVVSLKH 151
+ +G+G++G V A T E VA+K V + +E+ +L+H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVK--- 69
Query: 152 CFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
F+ + + L LE+ E R+ MP + + +Q+ + Y+H
Sbjct: 70 -FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLH 122
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIF 266
G IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 123 G-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
+ +D+WS G VL +L G+ P + D E Y+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YS 219
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 367
++K + +PW KI + L+ ++L +P+ R T
Sbjct: 220 DWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARIT 255
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 125/281 (44%), Gaps = 48/281 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVVSLKH 151
+ +G+G+ G V A T E VA+K V + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK--- 68
Query: 152 CFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
F+ + + L LE+ E R+ MP + + +Q+ + Y+H
Sbjct: 69 -FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLH 121
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV--KGEPNISYICSRY-YRAPELIF 266
G IG+ HRDIKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+
Sbjct: 122 G-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
+ +D+WS G VL +L G+ P + D E Y+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YS 218
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 367
++K + +PW KI + L+ ++L +P+ R T
Sbjct: 219 DWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARIT 254
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 31/209 (14%)
Query: 97 RVVGQGSFGIVFQAKCLE-----TGETVAIKKVLQDKRYKNR-----ELQTMRLLDHPNV 146
R +G+G FG V C + TGE VA+K + D ++R E+ +R L H ++
Sbjct: 20 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALA 206
+ K C D+ E L LV+E+VP R + R S + L + L+ QIC +A
Sbjct: 79 IKYKGC---CEDQGEKSLQLVMEYVPLGSLR--DYLPRHS--IGLAQLLLFAQQICEGMA 131
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-------YY 259
Y+H + HR++ +N+L++ + VK+ DFG AK + +G Y R ++
Sbjct: 132 YLHAQHYI-HRNLAARNVLLD-NDRLVKIGDFGLAKAVPEGH---EYYRVREDGDSPVFW 186
Query: 260 RAPELIFGATEYTTAIDIWSVGCVLAELL 288
APE + ++ A D+WS G L ELL
Sbjct: 187 YAPECL-KEYKFYYASDVWSFGVTLYELL 214
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 124/250 (49%), Gaps = 22/250 (8%)
Query: 85 GQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKV-LQDKRYKN---RELQTMRL 140
G PK+ Y +GQG+ G V+ A + TG+ VAI+++ LQ + K E+ MR
Sbjct: 17 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 74
Query: 141 LDHPNVVSLKHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTY 199
+PN+V+ + DEL+ +V+E++ ++ V ++ +
Sbjct: 75 NKNPNIVNYLDSYLV---GDELW--VVMEYLAGGSLTDVVTETCMDEGQIAAV-----CR 124
Query: 200 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYICSRY 258
+ +AL ++H V HR+IK N+L+ VKL DFG A++ + + + + Y
Sbjct: 125 ECLQALEFLHSN-QVIHRNIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSTMVGTPY 182
Query: 259 YRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 318
+ APE++ Y +DIWS+G + E++ G+P + E+ + L +I GTP +
Sbjct: 183 WMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNP 240
Query: 319 KCMNPNYTEF 328
+ ++ + +F
Sbjct: 241 EKLSAIFRDF 250
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 31/209 (14%)
Query: 97 RVVGQGSFGIVFQAKCLE-----TGETVAIKKVLQDKRYKNR-----ELQTMRLLDHPNV 146
R +G+G FG V C + TGE VA+K + D ++R E+ +R L H ++
Sbjct: 20 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALA 206
+ K C D+ E L LV+E+VP R + R S + L + L+ QIC +A
Sbjct: 79 IKYKGC---CEDQGEKSLQLVMEYVPLGSLR--DYLPRHS--IGLAQLLLFAQQICEGMA 131
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-------YY 259
Y+H + HR++ +N+L++ + VK+ DFG AK + +G Y R ++
Sbjct: 132 YLHSQHYI-HRNLAARNVLLD-NDRLVKIGDFGLAKAVPEGH---EYYRVREDGDSPVFW 186
Query: 260 RAPELIFGATEYTTAIDIWSVGCVLAELL 288
APE + ++ A D+WS G L ELL
Sbjct: 187 YAPECL-KEYKFYYASDVWSFGVTLYELL 214
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 123/304 (40%), Gaps = 54/304 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 147
+G G F IV + + TG+ A K ++ +R + RE+ +R + HPN++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYA-AKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 71
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+L F + TD + L+LE V E +A+ S + QI +
Sbjct: 72 TLHDIFENKTD-----VVLILELVSGGELFDFLAEKESLTEDE-----ATQFLKQILDGV 121
Query: 206 AYIHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
Y+H + H D+KP+N+++ N ++KL DFG A + G + + + AP
Sbjct: 122 HYLHSK-RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 180
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
E++ D+WS+G + LL G F GE+ + L I +N
Sbjct: 181 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNI------------SAVN 227
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRD 382
++ E F A D + RLL P R T ++ H + +R
Sbjct: 228 YDFDEEYFSN-------------TSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274
Query: 383 PNAR 386
N R
Sbjct: 275 RNVR 278
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 120/271 (44%), Gaps = 47/271 (17%)
Query: 116 GETVAIKKVLQDKRYKNRELQTMRLLD-HPNVVSLKHCFFSTTDKDELYLNLVLEFVPET 174
G + + ++V + + +E+ +R + HPN++ LK + + T + LV + +
Sbjct: 42 GGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT-----FFFLVFDLM--- 93
Query: 175 VYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI---GVCHRDIKPQNLLVNPHTH 231
+ + + ++++ L + T +I RAL + + + HRD+KP+N+L++ +
Sbjct: 94 --KKGELFDYLTEKVTL--SEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN 149
Query: 232 QVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE-----YTTAIDIWSVGCVLAE 286
+KL DFG + L GE + Y APE+I + Y +D+WS G ++
Sbjct: 150 -IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT 208
Query: 287 LLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRM 346
LL G P F + L I M+ NY +F P+ +
Sbjct: 209 LLAGSPPFWHRKQMLMLRMI--------------MSGNY-QFGSPEWDDY---------- 243
Query: 347 PPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
DLVSR L P R TA EA HPFF
Sbjct: 244 SDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 274
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 128/284 (45%), Gaps = 54/284 (19%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 150
+ +G+G++G V A T E VA+K ++ KR + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 151 HCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F+ + + L LE+ E R+ MP + + +Q+ + Y+
Sbjct: 69 --FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYL 120
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-----YRAPE 263
HG IG+ HRDIKP+NLL++ + +K+ DFG A V N + ++ Y APE
Sbjct: 121 HG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYN--NRERLLNKMXGTLPYVAPE 176
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 323
L+ + +D+WS G VL +L G+ P + D E
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSXQE------------------ 216
Query: 324 NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 367
Y+++K + +PW KI + L+ ++L +P+ R T
Sbjct: 217 -YSDWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARIT 254
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 120/271 (44%), Gaps = 47/271 (17%)
Query: 116 GETVAIKKVLQDKRYKNRELQTMRLLD-HPNVVSLKHCFFSTTDKDELYLNLVLEFVPET 174
G + + ++V + + +E+ +R + HPN++ LK + + T + LV + +
Sbjct: 55 GGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT-----FFFLVFDLM--- 106
Query: 175 VYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI---GVCHRDIKPQNLLVNPHTH 231
+ + + ++++ L + T +I RAL + + + HRD+KP+N+L++ +
Sbjct: 107 --KKGELFDYLTEKVTL--SEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN 162
Query: 232 QVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE-----YTTAIDIWSVGCVLAE 286
+KL DFG + L GE + Y APE+I + Y +D+WS G ++
Sbjct: 163 -IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT 221
Query: 287 LLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRM 346
LL G P F + L I M+ NY +F P+ W
Sbjct: 222 LLAGSPPFWHRKQMLMLRMI--------------MSGNY-QFGSPE-----WDD-----Y 256
Query: 347 PPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
DLVSR L P R TA EA HPFF
Sbjct: 257 SDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 46/250 (18%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT-------MRLLDHPNVVSLK 150
V+GQG+FG V +A+ AIKK+ R+ +L T + L+H VV
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKI----RHTEEKLSTILSEVMLLASLNHQYVVRYY 68
Query: 151 HCFFS--------TTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQI 201
+ T K + L + +E+ T+Y + + QR Y +L+ QI
Sbjct: 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE--YWRLFR-QI 125
Query: 202 CRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK-------VLVKGEPNI--- 251
AL+YIH G+ HRD+KP N+ ++ + VK+ DFG AK +L N+
Sbjct: 126 LEALSYIHSQ-GIIHRDLKPMNIFIDE-SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 252 -----SYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEI 306
S I + Y A E++ G Y ID++S+G + E+ ++P +G+++ V I
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM-----IYPFSTGMER-VNI 237
Query: 307 IKVLGTPTRE 316
+K L + + E
Sbjct: 238 LKKLRSVSIE 247
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 46/250 (18%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT-------MRLLDHPNVVSLK 150
V+GQG+FG V +A+ AIKK+ R+ +L T + L+H VV
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKI----RHTEEKLSTILSEVMLLASLNHQYVVRYY 68
Query: 151 HCFFS--------TTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQI 201
+ T K + L + +E+ T+Y + + QR Y +L+ QI
Sbjct: 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDE--YWRLFR-QI 125
Query: 202 CRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK-------VLVKGEPNI--- 251
AL+YIH G+ HRD+KP N+ ++ + VK+ DFG AK +L N+
Sbjct: 126 LEALSYIHSQ-GIIHRDLKPMNIFIDE-SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 252 -----SYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEI 306
S I + Y A E++ G Y ID++S+G + E+ ++P +G+++ V I
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM-----IYPFSTGMER-VNI 237
Query: 307 IKVLGTPTRE 316
+K L + + E
Sbjct: 238 LKKLRSVSIE 247
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 134/320 (41%), Gaps = 53/320 (16%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMR-----LL--DHPNVVSL 149
+V+G+G+F V K +TG+ A+K + + K E+ R L+ D + L
Sbjct: 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQL 126
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
F +DE YL LV+E+ + S+ +R+P + Y +I A+ +H
Sbjct: 127 HFAF-----QDENYLYLVMEYYVGG--DLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH 179
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGE-PNISYICSRYYRAPELIFG 267
+G HRDIKP N+L++ H ++L DFGS K+ G ++ + + Y +PE++
Sbjct: 180 R-LGYVHRDIKPDNILLDRCGH-IRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQA 237
Query: 268 ATEYTTAI------DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 321
D W++G E+ GQ F +S + +I+
Sbjct: 238 VGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIV-------------- 283
Query: 322 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRC---TALEACIHPFFY 378
K H + + +P EA D + RLL P R A + HPFF+
Sbjct: 284 ----------HYKEHLSLPLVDEGVPEEARDFIQRLL-CPPETRLGRGGAGDFRTHPFFF 332
Query: 379 ELRDPNARLPNGRPFPPLFN 398
L D + + PF P F
Sbjct: 333 GL-DWDGLRDSVPPFTPDFE 351
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 125/283 (44%), Gaps = 52/283 (18%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVVSLKH 151
+ +G+G++G V A T E VA+K V + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK--- 68
Query: 152 CFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
F+ + + L LE+ E R+ MP + + +Q+ + Y+H
Sbjct: 69 -FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLH 121
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-----YRAPEL 264
G IG+ HRDIKP+NLL++ + +K+ DFG A V N + ++ Y APEL
Sbjct: 122 G-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYN--NRERLLNKMXGTLPYVAPEL 177
Query: 265 IFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 324
+ + +D+WS G VL +L G+ P + D E
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------------- 216
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 367
Y+++K + +PW KI + L+ ++L +P+ R T
Sbjct: 217 YSDWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARIT 254
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 128/284 (45%), Gaps = 54/284 (19%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 150
+ +G+G++G V A T E VA+K ++ KR + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 151 HCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F+ + + L LE+ E R+ MP + + +Q+ + Y+
Sbjct: 69 --FYGHRREGNIQY-LFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYL 120
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-----YRAPE 263
HG IG+ HRDIKP+NLL++ + +K+ DFG A V N + ++ Y APE
Sbjct: 121 HG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYN--NRERLLNKMXGTLPYVAPE 176
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 323
L+ + +D+WS G VL +L G+ P + D E
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------------ 216
Query: 324 NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 367
Y+++K + +PW KI + L+ ++L +P+ R T
Sbjct: 217 -YSDWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARIT 254
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 16/197 (8%)
Query: 96 ERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--RELQTMRLLDHPNVVSLKHCF 153
E VVG+G+FG+V +AK + VAIK++ + K EL+ + ++HPN+V L
Sbjct: 13 EEVVGRGAFGVVCKAKW--RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 154 FSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG--G 211
+ + LV+E+ H + + + Q + +AY+H
Sbjct: 71 LNP-------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 123
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 271
+ HRD+KP NLL+ +K+CDFG+A + N S + APE +F + Y
Sbjct: 124 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK--GSAAWMAPE-VFEGSNY 180
Query: 272 TTAIDIWSVGCVLAELL 288
+ D++S G +L E++
Sbjct: 181 SEKCDVFSWGIILWEVI 197
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 16/197 (8%)
Query: 96 ERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--RELQTMRLLDHPNVVSLKHCF 153
E VVG+G+FG+V +AK + VAIK++ + K EL+ + ++HPN+V L
Sbjct: 14 EEVVGRGAFGVVCKAKW--RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 154 FSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG--G 211
+ + LV+E+ H + + + Q + +AY+H
Sbjct: 72 LNP-------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 124
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 271
+ HRD+KP NLL+ +K+CDFG+A + N S + APE +F + Y
Sbjct: 125 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK--GSAAWMAPE-VFEGSNY 181
Query: 272 TTAIDIWSVGCVLAELL 288
+ D++S G +L E++
Sbjct: 182 SEKCDVFSWGIILWEVI 198
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 17/224 (7%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRL 140
P + Y +G GS+G + + G+ + K++ +K+ E+ +R
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE 61
Query: 141 LDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTY 199
L HPN+V + D+ L +V+E+ + V ++ Q + +V
Sbjct: 62 LKHPNIVRY---YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 200 QICRALAYIH----GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP-NISYI 254
Q+ AL H GG V HRD+KP N+ ++ VKL DFG A++L E ++
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDG-KQNVKLGDFGLARILNHDEDFAKEFV 177
Query: 255 CSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGES 298
+ YY +PE + Y DIWS+GC+L EL P F S
Sbjct: 178 GTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 134/302 (44%), Gaps = 47/302 (15%)
Query: 91 ISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQD-KRYKNRELQTMRLLD-HPNVVS 148
IS+ + V+G G+ G + + + VA+K++L + + +RE+Q +R D HPNV+
Sbjct: 24 ISFCPKDVLGHGAEGTIVYRGMFDNRD-VAVKRILPECFSFADREVQLLRESDEHPNVIR 82
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
+ T+KD + + +E T+ + A + I + Q LA++
Sbjct: 83 -----YFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITL---LQQTTSGLAHL 134
Query: 209 HGGIGVCHRDIKPQNLLVN-PHTH---QVKLCDFGSAKVLVKGEPNISYIC----SRYYR 260
H + + HRD+KP N+L++ P+ H + + DFG K L G + S + +
Sbjct: 135 HS-LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWI 193
Query: 261 APELIFGATEY--TTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 318
APE++ + T +DI+S GCV ++ + P + + I+ LG + +
Sbjct: 194 APEMLSEDCKENPTYTVDIFSAGCVFY-YVISEGSHPFGKSLQRQANIL--LGACS---L 247
Query: 319 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFY 378
C++P E A +L+ +++ P R +A HPFF+
Sbjct: 248 DCLHPEKHEDVI-------------------ARELIEKMIAMDPQKRPSAKHVLKHPFFW 288
Query: 379 EL 380
L
Sbjct: 289 SL 290
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 143/338 (42%), Gaps = 66/338 (19%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE------LQTMRLLDHPN 145
+++ R +G G+FG V + ++ + A+K V K+Y L+ ++ D N
Sbjct: 36 AFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINN 95
Query: 146 VVSLK-HCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRA 204
+K H F D ++ L+ E + ++Y + + + I KLY +I +A
Sbjct: 96 NNIVKYHGKFMYYD----HMCLIFEPLGPSLYEIITRNNYNGFHIEDI--KLYCIEILKA 149
Query: 205 LAYIHGGIGVCHRDIKPQNLLVN-PHTHQ-----------------------VKLCDFGS 240
L Y+ + + H D+KP+N+L++ P+ + +KL DFG
Sbjct: 150 LNYLRK-MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGC 208
Query: 241 AKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGV 300
A K + + S I +R YRAPE+I + + D+WS GCVLAEL G LF +
Sbjct: 209 ATF--KSDYHGSIINTRQYRAPEVILNLG-WDVSSDMWSFGCVLAELYTGSLLFRTHEHM 265
Query: 301 DQLVEIIKVL----------GTPTREEIKCMNPNYTEFKFPQ-----------IKAHPWH 339
+ L + ++ T T K +N + + +P+ K P +
Sbjct: 266 EHLAMMESIIQPIPKNMLYEATKTNGS-KYVNKDELKLAWPENASSINSIKHVKKCLPLY 324
Query: 340 KIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
KI + D + +LQ P LR + E H F
Sbjct: 325 KIIKHEL---FCDFLYSILQIDPTLRPSPAELLKHKFL 359
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 111/231 (48%), Gaps = 30/231 (12%)
Query: 85 GQPKQTIS---YMAERVVGQGSFGIVFQAKCLE-TGE--TVAIKKVLQDKRYKNRE---- 134
G P+ I+ + R++G+G FG V++ GE VA+K +D N+E
Sbjct: 15 GSPQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMS 74
Query: 135 -LQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHY-SRASQRMPLI 192
M+ LDHP++V L +++ ++ ++E P Y HY R + ++
Sbjct: 75 EAVIMKNLDHPHIVKL----IGIIEEEPTWI--IMELYP---YGELGHYLERNKNSLKVL 125
Query: 193 YVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 252
+ LY+ QIC+A+AY+ I HRDI +N+LV VKL DFG ++ ++ E
Sbjct: 126 TLVLYSLQICKAMAYLE-SINCVHRDIAVRNILV-ASPECVKLGDFGLSR-YIEDEDYYK 182
Query: 253 YICSRY---YRAPELIFGATEYTTAIDIWSVGCVLAELLL--GQPLFPGES 298
+R + +PE I +TTA D+W + E+L QP F E+
Sbjct: 183 ASVTRLPIKWMSPESI-NFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN 232
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 35/211 (16%)
Query: 97 RVVGQGSFGIVFQAKCLE-----TGETVAIKKVL-----QDKRYKNRELQTMRLLDHPNV 146
R +G+G FG V C + TGE VA+K + Q + RE++ +R L H ++
Sbjct: 14 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFVPETVYR--VAKHYSRASQRMPLIYVKLYTYQICRA 204
V K C D+ E + LV+E+VP R + +H +Q + L+ QIC
Sbjct: 73 VKYKGC---CEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLL------LFAQQICEG 123
Query: 205 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR------- 257
+AY+H + HR + +N+L++ + VK+ DFG AK + +G Y R
Sbjct: 124 MAYLHAQHYI-HRALAARNVLLD-NDRLVKIGDFGLAKAVPEGH---EYYRVREDGDSPV 178
Query: 258 YYRAPELIFGATEYTTAIDIWSVGCVLAELL 288
++ APE + ++ A D+WS G L ELL
Sbjct: 179 FWYAPECL-KECKFYYASDVWSFGVTLYELL 208
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 35/211 (16%)
Query: 97 RVVGQGSFGIVFQAKCLE-----TGETVAIKKVL-----QDKRYKNRELQTMRLLDHPNV 146
R +G+G FG V C + TGE VA+K + Q + RE++ +R L H ++
Sbjct: 15 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFVPETVYR--VAKHYSRASQRMPLIYVKLYTYQICRA 204
V K C D+ E + LV+E+VP R + +H +Q + L+ QIC
Sbjct: 74 VKYKGC---CEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLL------LFAQQICEG 124
Query: 205 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR------- 257
+AY+H + HR + +N+L++ + VK+ DFG AK + +G Y R
Sbjct: 125 MAYLHAQHYI-HRALAARNVLLD-NDRLVKIGDFGLAKAVPEGH---EYYRVREDGDSPV 179
Query: 258 YYRAPELIFGATEYTTAIDIWSVGCVLAELL 288
++ APE + ++ A D+WS G L ELL
Sbjct: 180 FWYAPECL-KECKFYYASDVWSFGVTLYELL 209
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 122/293 (41%), Gaps = 37/293 (12%)
Query: 94 MAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT-MRLLDHPNVVSLKHC 152
+ +V+G G G V Q T E A+K +LQD RE++ R P++V +
Sbjct: 35 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 93
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICR----ALAYI 208
+ + LY + + +SR R + + +I + A+ Y+
Sbjct: 94 Y------ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 147
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 266
H I + HRD+KP+NLL +KL DFG AK + + YY APE +
Sbjct: 148 HS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 205
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
G +Y + D+WS+G ++ LL G P F G + G TR +
Sbjct: 206 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM-------G 252
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYE 379
+++FP + W ++ E L+ LL+ P R T E HP+ +
Sbjct: 253 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 297
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 122/293 (41%), Gaps = 37/293 (12%)
Query: 94 MAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT-MRLLDHPNVVSLKHC 152
+ +V+G G G V Q T E A+K +LQD RE++ R P++V +
Sbjct: 27 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 85
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICR----ALAYI 208
+ + LY + + +SR R + + +I + A+ Y+
Sbjct: 86 Y------ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 139
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 266
H I + HRD+KP+NLL +KL DFG AK + + YY APE +
Sbjct: 140 HS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 197
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
G +Y + D+WS+G ++ LL G P F G + G TR +
Sbjct: 198 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM-------G 244
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYE 379
+++FP + W ++ E L+ LL+ P R T E HP+ +
Sbjct: 245 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 289
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 122/293 (41%), Gaps = 37/293 (12%)
Query: 94 MAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT-MRLLDHPNVVSLKHC 152
+ +V+G G G V Q T E A+K +LQD RE++ R P++V +
Sbjct: 65 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 123
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICR----ALAYI 208
+ + LY + + +SR R + + +I + A+ Y+
Sbjct: 124 Y------ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 177
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 266
H I + HRD+KP+NLL +KL DFG AK + + YY APE +
Sbjct: 178 HS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 235
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
G +Y + D+WS+G ++ LL G P F G + G TR +
Sbjct: 236 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM-------G 282
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYE 379
+++FP + W ++ E L+ LL+ P R T E HP+ +
Sbjct: 283 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 327
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 102/223 (45%), Gaps = 28/223 (12%)
Query: 83 RNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE-----LQT 137
R+ P+ + E +G G+FG V++A+ ET +A KV+ K + E +
Sbjct: 31 RDLNPEDFWEIIGE--LGDGAFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDI 87
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLI--YV 194
+ DHPN+V L F+ + L +++EF V V R PL +
Sbjct: 88 LASCDHPNIVKLLDAFYYENN-----LWILIEFCAGGAVDAVMLELER-----PLTESQI 137
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISY 253
++ Q AL Y+H + HRD+K N+L +KL DFG SAK + S+
Sbjct: 138 QVVCKQTLDALNYLHDN-KIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRTIQRRDSF 195
Query: 254 ICSRYYRAPELIFGATE----YTTAIDIWSVGCVLAELLLGQP 292
I + Y+ APE++ T Y D+WS+G L E+ +P
Sbjct: 196 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 102/223 (45%), Gaps = 28/223 (12%)
Query: 83 RNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE-----LQT 137
R+ P+ + E +G G+FG V++A+ ET +A KV+ K + E +
Sbjct: 31 RDLNPEDFWEIIGE--LGDGAFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDI 87
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLI--YV 194
+ DHPN+V L F+ + L +++EF V V R PL +
Sbjct: 88 LASCDHPNIVKLLDAFYYENN-----LWILIEFCAGGAVDAVMLELER-----PLTESQI 137
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISY 253
++ Q AL Y+H + HRD+K N+L +KL DFG SAK + S+
Sbjct: 138 QVVCKQTLDALNYLHDN-KIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRXIQRRDSF 195
Query: 254 ICSRYYRAPELIFGATE----YTTAIDIWSVGCVLAELLLGQP 292
I + Y+ APE++ T Y D+WS+G L E+ +P
Sbjct: 196 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 122/304 (40%), Gaps = 54/304 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 147
+G G F IV + + TG+ A K ++ +R + RE+ +R + HPN++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYA-AKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNII 92
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+L F + TD + L+LE V E +A+ S + QI +
Sbjct: 93 TLHDIFENKTD-----VVLILELVSGGELFDFLAEKESLTEDE-----ATQFLKQILDGV 142
Query: 206 AYIHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
Y+H + H D+KP+N+++ N ++KL DFG A + G + + + AP
Sbjct: 143 HYLHSK-RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 201
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
E++ D+WS+G + LL G F GE+ + L I +N
Sbjct: 202 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNI------------SAVN 248
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRD 382
++ E F A D + RLL P R ++ H + +R
Sbjct: 249 YDFDEEYFSN-------------TSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIKAIRR 295
Query: 383 PNAR 386
N R
Sbjct: 296 RNVR 299
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 122/293 (41%), Gaps = 37/293 (12%)
Query: 94 MAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT-MRLLDHPNVVSLKHC 152
+ +V+G G G V Q T E A+K +LQD RE++ R P++V +
Sbjct: 71 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 129
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICR----ALAYI 208
+ + LY + + +SR R + + +I + A+ Y+
Sbjct: 130 Y------ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 183
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 266
H I + HRD+KP+NLL +KL DFG AK + + YY APE +
Sbjct: 184 HS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 241
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
G +Y + D+WS+G ++ LL G P F G + G TR +
Sbjct: 242 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM-------G 288
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYE 379
+++FP + W ++ E L+ LL+ P R T E HP+ +
Sbjct: 289 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 333
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 122/293 (41%), Gaps = 37/293 (12%)
Query: 94 MAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT-MRLLDHPNVVSLKHC 152
+ +V+G G G V Q T E A+K +LQD RE++ R P++V +
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 79
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICR----ALAYI 208
+ + LY + + +SR R + + +I + A+ Y+
Sbjct: 80 Y------ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 133
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 266
H I + HRD+KP+NLL +KL DFG AK + + YY APE +
Sbjct: 134 HS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 191
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
G +Y + D+WS+G ++ LL G P F G + G TR +
Sbjct: 192 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM-------G 238
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYE 379
+++FP + W ++ E L+ LL+ P R T E HP+ +
Sbjct: 239 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 283
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 122/293 (41%), Gaps = 37/293 (12%)
Query: 94 MAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT-MRLLDHPNVVSLKHC 152
+ +V+G G G V Q T E A+K +LQD RE++ R P++V +
Sbjct: 26 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 84
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICR----ALAYI 208
+ + LY + + +SR R + + +I + A+ Y+
Sbjct: 85 Y------ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 138
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 266
H I + HRD+KP+NLL +KL DFG AK + + YY APE +
Sbjct: 139 HS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 196
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
G +Y + D+WS+G ++ LL G P F G + G TR +
Sbjct: 197 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM-------G 243
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYE 379
+++FP + W ++ E L+ LL+ P R T E HP+ +
Sbjct: 244 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 288
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 122/293 (41%), Gaps = 37/293 (12%)
Query: 94 MAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT-MRLLDHPNVVSLKHC 152
+ +V+G G G V Q T E A+K +LQD RE++ R P++V +
Sbjct: 19 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 77
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICR----ALAYI 208
+ + LY + + +SR R + + +I + A+ Y+
Sbjct: 78 Y------ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 131
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 266
H I + HRD+KP+NLL +KL DFG AK + + YY APE +
Sbjct: 132 HS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 189
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
G +Y + D+WS+G ++ LL G P F G + G TR +
Sbjct: 190 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM-------G 236
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYE 379
+++FP + W ++ E L+ LL+ P R T E HP+ +
Sbjct: 237 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 281
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 122/293 (41%), Gaps = 37/293 (12%)
Query: 94 MAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT-MRLLDHPNVVSLKHC 152
+ +V+G G G V Q T E A+K +LQD RE++ R P++V +
Sbjct: 25 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 83
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICR----ALAYI 208
+ + LY + + +SR R + + +I + A+ Y+
Sbjct: 84 Y------ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 137
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 266
H I + HRD+KP+NLL +KL DFG AK + + YY APE +
Sbjct: 138 HS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 195
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
G +Y + D+WS+G ++ LL G P F G + G TR +
Sbjct: 196 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM-------G 242
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYE 379
+++FP + W ++ E L+ LL+ P R T E HP+ +
Sbjct: 243 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 287
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 105/216 (48%), Gaps = 27/216 (12%)
Query: 97 RVVGQGSFGIVFQAKCLE-TGE--TVAIKKVLQDKRYKNRE-----LQTMRLLDHPNVVS 148
R++G+G FG V++ GE VA+K +D N+E M+ LDHP++V
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 73
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHY-SRASQRMPLIYVKLYTYQICRALAY 207
L +++ ++ ++E P Y HY R + ++ + LY+ QIC+A+AY
Sbjct: 74 L----IGIIEEEPTWI--IMELYP---YGELGHYLERNKNSLKVLTLVLYSLQICKAMAY 124
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPEL 264
+ I HRDI +N+LV VKL DFG ++ ++ E +R + +PE
Sbjct: 125 LE-SINCVHRDIAVRNILV-ASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPES 181
Query: 265 IFGATEYTTAIDIWSVGCVLAELLL--GQPLFPGES 298
I +TTA D+W + E+L QP F E+
Sbjct: 182 I-NFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN 216
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 105/216 (48%), Gaps = 27/216 (12%)
Query: 97 RVVGQGSFGIVFQAKCLE-TGE--TVAIKKVLQDKRYKNRE-----LQTMRLLDHPNVVS 148
R++G+G FG V++ GE VA+K +D N+E M+ LDHP++V
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHY-SRASQRMPLIYVKLYTYQICRALAY 207
L +++ ++ ++E P Y HY R + ++ + LY+ QIC+A+AY
Sbjct: 78 L----IGIIEEEPTWI--IMELYP---YGELGHYLERNKNSLKVLTLVLYSLQICKAMAY 128
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPEL 264
+ I HRDI +N+LV VKL DFG ++ ++ E +R + +PE
Sbjct: 129 LE-SINCVHRDIAVRNILV-ASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPES 185
Query: 265 IFGATEYTTAIDIWSVGCVLAELLL--GQPLFPGES 298
I +TTA D+W + E+L QP F E+
Sbjct: 186 I-NFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN 220
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 122/293 (41%), Gaps = 37/293 (12%)
Query: 94 MAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT-MRLLDHPNVVSLKHC 152
+ +V+G G G V Q T E A+K +LQD RE++ R P++V +
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 79
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICR----ALAYI 208
+ + LY + + +SR R + + +I + A+ Y+
Sbjct: 80 Y------ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 133
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 266
H I + HRD+KP+NLL +KL DFG AK + + YY APE +
Sbjct: 134 HS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 191
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
G +Y + D+WS+G ++ LL G P F G + G TR +
Sbjct: 192 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM-------G 238
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYE 379
+++FP + W ++ E L+ LL+ P R T E HP+ +
Sbjct: 239 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 283
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 122/293 (41%), Gaps = 37/293 (12%)
Query: 94 MAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT-MRLLDHPNVVSLKHC 152
+ +V+G G G V Q T E A+K +LQD RE++ R P++V +
Sbjct: 20 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 78
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICR----ALAYI 208
+ + LY + + +SR R + + +I + A+ Y+
Sbjct: 79 Y------ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 132
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 266
H I + HRD+KP+NLL +KL DFG AK + + YY APE +
Sbjct: 133 HS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 190
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
G +Y + D+WS+G ++ LL G P F G + G TR +
Sbjct: 191 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM-------G 237
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYE 379
+++FP + W ++ E L+ LL+ P R T E HP+ +
Sbjct: 238 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 282
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 136/338 (40%), Gaps = 75/338 (22%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN---------RELQTMRLLDHPNVVS 148
V+G+G F +V + ETG+ A+K V K + RE +L HP++V
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 149 LKHCF---------FSTTDKDELYLNLVLEFVPETVYR--VAKHYSRASQRMPLIYVKLY 197
L + F D +L +V VY VA HY R
Sbjct: 93 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR------------- 139
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLV--NPHTHQVKLCDFGSAKVLVKGEPNI---S 252
QI AL Y H + HRD+KP +L+ ++ VKL FG A L GE +
Sbjct: 140 --QILEALRYCHDN-NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLVAGG 194
Query: 253 YICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 312
+ + ++ APE++ Y +D+W G +L LL G F G ++L E I
Sbjct: 195 RVGTPHFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGI----- 246
Query: 313 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
+ + K MNP W I A DLV R+L P R T EA
Sbjct: 247 -IKGKYK-MNPR------------QWSHI-----SESAKDLVRRMLMLDPAERITVYEAL 287
Query: 373 IHPFFYELRDPNA---RLPNGRPFPPLFNFKPQELKGA 407
HP+ E RD A LP FN + ++LKGA
Sbjct: 288 NHPWLKE-RDRYAYKIHLPETVEQLRKFNAR-RKLKGA 323
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 100/224 (44%), Gaps = 17/224 (7%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRL 140
P + Y +G GS+G + + G+ + K++ +K+ E+ +R
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE 61
Query: 141 LDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTY 199
L HPN+V + D+ L +V+E+ + V ++ Q + +V
Sbjct: 62 LKHPNIVRY---YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 200 QICRALAYIH----GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP-NISYI 254
Q+ AL H GG V HRD+KP N+ ++ VKL DFG A++L +++
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDTSFAKTFV 177
Query: 255 CSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGES 298
+ YY +PE + Y DIWS+GC+L EL P F S
Sbjct: 178 GTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 100/224 (44%), Gaps = 17/224 (7%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRL 140
P + Y +G GS+G + + G+ + K++ +K+ E+ +R
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE 61
Query: 141 LDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTY 199
L HPN+V + D+ L +V+E+ + V ++ Q + +V
Sbjct: 62 LKHPNIVRY---YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 200 QICRALAYIH----GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP-NISYI 254
Q+ AL H GG V HRD+KP N+ ++ VKL DFG A++L +++
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDTSFAKAFV 177
Query: 255 CSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGES 298
+ YY +PE + Y DIWS+GC+L EL P F S
Sbjct: 178 GTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 136/338 (40%), Gaps = 75/338 (22%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN---------RELQTMRLLDHPNVVS 148
V+G+G F +V + ETG+ A+K V K + RE +L HP++V
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 149 LKHCF---------FSTTDKDELYLNLVLEFVPETVYR--VAKHYSRASQRMPLIYVKLY 197
L + F D +L +V VY VA HY R
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR------------- 137
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLV--NPHTHQVKLCDFGSAKVLVKGEPNI---S 252
QI AL Y H + HRD+KP +L+ ++ VKL FG A L GE +
Sbjct: 138 --QILEALRYCHDN-NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLVAGG 192
Query: 253 YICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 312
+ + ++ APE++ Y +D+W G +L LL G F G ++L E I
Sbjct: 193 RVGTPHFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGI----- 244
Query: 313 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
+ + K MNP W I A DLV R+L P R T EA
Sbjct: 245 -IKGKYK-MNPR------------QWSHI-----SESAKDLVRRMLMLDPAERITVYEAL 285
Query: 373 IHPFFYELRDPNA---RLPNGRPFPPLFNFKPQELKGA 407
HP+ E RD A LP FN + ++LKGA
Sbjct: 286 NHPWLKE-RDRYAYKIHLPETVEQLRKFNAR-RKLKGA 321
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 121/293 (41%), Gaps = 37/293 (12%)
Query: 94 MAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT-MRLLDHPNVVSLKHC 152
+ +V+G G G V Q T E A+K +LQD RE++ R P++V +
Sbjct: 19 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 77
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICR----ALAYI 208
+ + LY + + +SR R + + +I + A+ Y+
Sbjct: 78 Y------ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 131
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 266
H I + HRD+KP+NLL +KL DFG AK + YY APE +
Sbjct: 132 HS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPE-VL 189
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
G +Y + D+WS+G ++ LL G P F G + G TR +
Sbjct: 190 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM-------G 236
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYE 379
+++FP + W ++ E L+ LL+ P R T E HP+ +
Sbjct: 237 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 281
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 23/220 (10%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQ-------TMRLLDHPNVVSLK 150
V+G+GSFG V ++ T E A+K + +D ++ +++ + L P ++
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 151 HCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
H F T D+ L V+E+V + +Y + + R + Y +I L ++
Sbjct: 87 HSCFQTMDR----LYFVMEYVNGGDLMYHIQQ-----VGRFKEPHAVFYAAEIAIGLFFL 137
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFG 267
G+ +RD+K N++++ H +K+ DFG K + C Y APE+I
Sbjct: 138 QSK-GIIYRDLKLDNVMLDSEGH-IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII-A 194
Query: 268 ATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 307
Y ++D W+ G +L E+L GQ F GE D+L + I
Sbjct: 195 YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-DELFQSI 233
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 23/220 (10%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQ-------TMRLLDHPNVVSLK 150
V+G+GSFG V ++ T E A+K + +D ++ +++ + L P ++
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 151 HCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
H F T D+ L V+E+V + +Y + + R + Y +I L ++
Sbjct: 408 HSCFQTMDR----LYFVMEYVNGGDLMYHIQQ-----VGRFKEPHAVFYAAEIAIGLFFL 458
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFG 267
G+ +RD+K N++++ H +K+ DFG K + C Y APE+I
Sbjct: 459 QSK-GIIYRDLKLDNVMLDSEGH-IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII-A 515
Query: 268 ATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 307
Y ++D W+ G +L E+L GQ F GE D+L + I
Sbjct: 516 YQPYGKSVDWWAFGVLLYEMLAGQAPFEGED-EDELFQSI 554
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 197 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 256
Y++Q+ R + ++ + HRD+ +N+L++ + VK+CDFG A+ + K + +
Sbjct: 204 YSFQVARGMEFLSSRKCI-HRDLAARNILLS-ENNVVKICDFGLARDIYKNPDYVRKGDT 261
Query: 257 RY---YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGT 312
R + APE IF Y+T D+WS G +L E+ LG +PG V++ + +
Sbjct: 262 RLPLKWMAPESIFDKI-YSTKSDVWSYGVLLWEIFSLGGSPYPG-------VQMDEDFCS 313
Query: 313 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 357
RE ++ P Y+ + QI WH+ +R P +LV +L
Sbjct: 314 RLREGMRMRAPEYSTPEIYQIMLDCWHRDPKER--PRFAELVEKL 356
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 28/223 (12%)
Query: 83 RNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE-----LQT 137
R+ P+ + E +G G+FG V++A+ ET +A KV+ K + E +
Sbjct: 31 RDLNPEDFWEIIGE--LGDGAFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDI 87
Query: 138 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLI--YV 194
+ DHPN+V L F+ + L +++EF V V R PL +
Sbjct: 88 LASCDHPNIVKLLDAFYYENN-----LWILIEFCAGGAVDAVMLELER-----PLTESQI 137
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISY 253
++ Q AL Y+H + HRD+K N+L +KL DFG SAK + +
Sbjct: 138 QVVCKQTLDALNYLHDN-KIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRXIQRRDXF 195
Query: 254 ICSRYYRAPELIFGATE----YTTAIDIWSVGCVLAELLLGQP 292
I + Y+ APE++ T Y D+WS+G L E+ +P
Sbjct: 196 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 117/293 (39%), Gaps = 37/293 (12%)
Query: 94 MAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT-MRLLDHPNVVSLKHC 152
+ +V+G G G V Q T E A+K LQD RE++ R P++V +
Sbjct: 65 VTSQVLGLGINGKVLQIFNKRTQEKFALK-XLQDCPKARREVELHWRASQCPHIVRIVDV 123
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICR----ALAYI 208
+ + LY + + +SR R + + +I + A+ Y+
Sbjct: 124 Y------ENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYL 177
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 266
H I + HRD+KP+NLL +KL DFG AK + + YY APE +
Sbjct: 178 HS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 235
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
G +Y + D WS+G + LL G P F G + G TR +
Sbjct: 236 GPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHG------LAISPGXKTR-----IRXGQY 284
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYE 379
EF P+ W ++ E L+ LL+ P R T E HP+ +
Sbjct: 285 EFPNPE-----WSEVSE-----EVKXLIRNLLKTEPTQRXTITEFXNHPWIXQ 327
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 126/329 (38%), Gaps = 71/329 (21%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR-------- 133
G +G Q Y + +G+GS+G+V A E T KVL K+ +
Sbjct: 4 GSSGDCVQLNQYTLKDEIGKGSYGVVKLAYN-ENDNTYYAMKVLSKKKLIRQAGFPRRPP 62
Query: 134 -----------------------ELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEF 170
E+ ++ LDHPNVV L D +E +L +V E
Sbjct: 63 PRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVL---DDPNEDHLYMVFEL 119
Query: 171 VPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHT 230
V + S+ + Y + + + Y+H + HRDIKP NLLV
Sbjct: 120 VNQGPVMEVPTLKPLSEDQ----ARFYFQDLIKGIEYLHYQ-KIIHRDIKPSNLLVGEDG 174
Query: 231 HQVKLCDFGSAKVLVKGEPNIS-YICSRYYRAPELIFGATEYTT--AIDIWSVGCVLAEL 287
H +K+ DFG + + +S + + + APE + + + A+D+W++G L
Sbjct: 175 H-IKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCF 233
Query: 288 LLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMP 347
+ GQ F E I C++ +IK+ +
Sbjct: 234 VFGQCPF-------------------MDERIMCLH--------SKIKSQALEFPDQPDIA 266
Query: 348 PEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ DL++R+L +P R E +HP+
Sbjct: 267 EDLKDLITRMLDKNPESRIVVPEIKLHPW 295
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 108/210 (51%), Gaps = 23/210 (10%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIK--KVLQDKRYK-NRELQTMRLLDHPNVVSLKHCFF 154
+VG G++G V++ + ++TG+ AIK V D+ + +E+ ++ H ++ + F
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAF 90
Query: 155 STTD----KDELYLNLVLEFV-PETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
+ D+L+ LV+EF +V + K+ + + ++ +I R L+++H
Sbjct: 91 IKKNPPGMDDQLW--LVMEFCGAGSVTDLIKNTKGNTLKEE--WIAYICREILRGLSHLH 146
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVK--GEPNISYICSRYYRAPELIF- 266
V HRDIK QN+L+ + +VKL DFG + L + G N ++I + Y+ APE+I
Sbjct: 147 QH-KVIHRDIKGQNVLLTENA-EVKLVDFGVSAQLDRTVGRRN-TFIGTPYWMAPEVIAC 203
Query: 267 ----GATEYTTAIDIWSVGCVLAELLLGQP 292
AT Y D+WS+G E+ G P
Sbjct: 204 DENPDAT-YDFKSDLWSLGITAIEMAEGAP 232
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 22/222 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKRYKNRELQTMRLLDHPNVV 147
++ ++GQG+ VF+ + +TG+ AIK L+ + RE + ++ L+H N+V
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALA 206
L TT + ++ L++EF P ++Y V + S A +P + + +
Sbjct: 71 KLFAIEEETTTRHKV---LIMEFCPCGSLYTVLEEPSNAYG-LPESEFLIVLRDVVGGMN 126
Query: 207 YIHGGIGVCHRDIKPQNLL--VNPHTHQV-KLCDFGSAKVLVKGEPNISYICSRYYRAPE 263
++ G+ HR+IKP N++ + V KL DFG+A+ L E +S + Y P+
Sbjct: 127 HLREN-GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPD 185
Query: 264 LIFGAT-------EYTTAIDIWSVGCVLAELLLGQ-PLFPGE 297
+ A +Y +D+WS+G G P P E
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 122/294 (41%), Gaps = 54/294 (18%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 147
+G G F +V + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+L + + TD + L+LE V E +A+ S + + QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEE-----ATEFLKQILNGV 127
Query: 206 AYIHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
Y+H + + H D+KP+N+++ N ++K+ DFG A + G + + + AP
Sbjct: 128 YYLHS-LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
E++ D+WS+G + LL G F G++ + L + +N
Sbjct: 187 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVN 233
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ + F A A D + RLL P R T ++ HP+
Sbjct: 234 YEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 22/202 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-----LQDKRYKNRELQTMRLLDHPNVVSLKHCF 153
+G+GSFG VF+ T + VAIK + + +E+ + D P V +
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 154 FSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTY--QICRALAYIHGG 211
T L +++E++ + PL ++ T +I + L Y+H
Sbjct: 75 LKDTK-----LWIIMEYLG------GGSALDLLEPGPLDETQIATILREILKGLDYLHSE 123
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE-PNISYICSRYYRAPELIFGATE 270
+ HRDIK N+L++ H +VKL DFG A L + +++ + ++ APE+I +
Sbjct: 124 KKI-HRDIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-KQSA 180
Query: 271 YTTAIDIWSVGCVLAELLLGQP 292
Y + DIWS+G EL G+P
Sbjct: 181 YDSKADIWSLGITAIELARGEP 202
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 140/367 (38%), Gaps = 92/367 (25%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL--------DHP 144
Y R +G G F V+ + ++ + VA+K V + Y L +RLL + P
Sbjct: 39 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDP 98
Query: 145 N---VVSLKHCFFSTTDKDELYLNLVLEFVPETVYR--VAKHYSRASQRMPLIYVKLYTY 199
N VV L F + + ++ +V E + + + + +Y Q +PL VK
Sbjct: 99 NREMVVQLLDDF-KISGVNGTHICMVFEVLGHHLLKWIIKSNY----QGLPLPCVKKIIQ 153
Query: 200 QICRALAYIHGGIGVCHRDIKPQNLLV--------------------------------- 226
Q+ + L Y+H + H DIKP+N+L+
Sbjct: 154 QVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTA 213
Query: 227 ---------------NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 271
N +VK+ D G+A + K I +R YR+ E++ G+ Y
Sbjct: 214 PATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRSLEVLIGSG-Y 270
Query: 272 TTAIDIWSVGCVLAELLLGQPLFPGESG------VDQLVEIIKVLGTPTREEIKCMNPNY 325
T DIWS C+ EL G LF SG D + II++LG R+ I + Y
Sbjct: 271 NTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLI--VAGKY 328
Query: 326 TEFKFPQ-------IKAHPWHKI--------FHKRMPPEAVDLVSRLLQYSPNLRCTALE 370
++ F + K PW + + D + +L+ P R TA E
Sbjct: 329 SKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAE 388
Query: 371 ACIHPFF 377
HP+
Sbjct: 389 CLRHPWL 395
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 122/294 (41%), Gaps = 54/294 (18%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 147
+G G F +V + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+L + + TD + L+LE V E +A+ S + + QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEE-----ATEFLKQILNGV 127
Query: 206 AYIHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
Y+H + + H D+KP+N+++ N ++K+ DFG A + G + + + AP
Sbjct: 128 YYLHS-LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
E++ D+WS+G + LL G F G++ + L + +N
Sbjct: 187 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVN 233
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ + F A A D + RLL P R T ++ HP+
Sbjct: 234 YEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 122/294 (41%), Gaps = 54/294 (18%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 147
+G G F +V + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+L + + TD + L+LE V E +A+ S + + QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEE-----ATEFLKQILNGV 127
Query: 206 AYIHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
Y+H + + H D+KP+N+++ N ++K+ DFG A + G + + + AP
Sbjct: 128 YYLHS-LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
E++ D+WS+G + LL G F G++ + L + +N
Sbjct: 187 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVN 233
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ + F A A D + RLL P R T ++ HP+
Sbjct: 234 YEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 22/202 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-----LQDKRYKNRELQTMRLLDHPNVVSLKHCF 153
+G+GSFG VF+ T + VAIK + + +E+ + D P V +
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 154 FSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTY--QICRALAYIHGG 211
T L +++E++ + PL ++ T +I + L Y+H
Sbjct: 95 LKDTK-----LWIIMEYLG------GGSALDLLEPGPLDETQIATILREILKGLDYLHSE 143
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE-PNISYICSRYYRAPELIFGATE 270
+ HRDIK N+L++ H +VKL DFG A L + +++ + ++ APE+I +
Sbjct: 144 KKI-HRDIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-KQSA 200
Query: 271 YTTAIDIWSVGCVLAELLLGQP 292
Y + DIWS+G EL G+P
Sbjct: 201 YDSKADIWSLGITAIELARGEP 222
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 122/294 (41%), Gaps = 54/294 (18%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 147
+G G F +V + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+L + + TD + L+LE V E +A+ S + + QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEE-----ATEFLKQILNGV 127
Query: 206 AYIHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
Y+H + + H D+KP+N+++ N ++K+ DFG A + G + + + AP
Sbjct: 128 YYLHS-LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
E++ D+WS+G + LL G F G++ + L + +N
Sbjct: 187 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVN 233
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ + F A A D + RLL P R T ++ HP+
Sbjct: 234 YEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 122/294 (41%), Gaps = 54/294 (18%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 147
+G G F +V + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+L + + TD + L+LE V E +A+ S + + QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEE-----ATEFLKQILNGV 127
Query: 206 AYIHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
Y+H + + H D+KP+N+++ N ++K+ DFG A + G + + + AP
Sbjct: 128 YYLHS-LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
E++ D+WS+G + LL G F G++ + L + +N
Sbjct: 187 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVN 233
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ + F A A D + RLL P R T ++ HP+
Sbjct: 234 YEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 122/294 (41%), Gaps = 54/294 (18%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 147
+G G F +V + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+L + + TD + L+LE V E +A+ S + + QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEE-----ATEFLKQILNGV 127
Query: 206 AYIHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
Y+H + + H D+KP+N+++ N ++K+ DFG A + G + + + AP
Sbjct: 128 YYLHS-LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
E++ D+WS+G + LL G F G++ + L + +N
Sbjct: 187 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVN 233
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ + F A A D + RLL P R T ++ HP+
Sbjct: 234 YEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 122/294 (41%), Gaps = 54/294 (18%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 147
+G G F +V + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+L + + TD + L+LE V E +A+ S + + QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEE-----ATEFLKQILNGV 127
Query: 206 AYIHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
Y+H + + H D+KP+N+++ N ++K+ DFG A + G + + + AP
Sbjct: 128 YYLHS-LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
E++ D+WS+G + LL G F G++ + L + +N
Sbjct: 187 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVN 233
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ + F A A D + RLL P R T ++ HP+
Sbjct: 234 YEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 122/294 (41%), Gaps = 54/294 (18%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 147
+G G F +V + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+L + + TD + L+LE V E +A+ S + + QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEE-----ATEFLKQILNGV 127
Query: 206 AYIHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
Y+H + + H D+KP+N+++ N ++K+ DFG A + G + + + AP
Sbjct: 128 YYLHS-LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
E++ D+WS+G + LL G F G++ + L + +N
Sbjct: 187 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVN 233
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ + F A A D + RLL P R T ++ HP+
Sbjct: 234 YEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 122/294 (41%), Gaps = 54/294 (18%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 147
+G G F +V + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+L + + TD + L+LE V E +A+ S + + QI +
Sbjct: 77 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEE-----ATEFLKQILNGV 126
Query: 206 AYIHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
Y+H + + H D+KP+N+++ N ++K+ DFG A + G + + + AP
Sbjct: 127 YYLHS-LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 185
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
E++ D+WS+G + LL G F G++ + L + +N
Sbjct: 186 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVN 232
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ + F A A D + RLL P R T ++ HP+
Sbjct: 233 YEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 273
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 122/294 (41%), Gaps = 54/294 (18%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 147
+G G F +V + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+L + + TD + L+LE V E +A+ S + + QI +
Sbjct: 77 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEE-----ATEFLKQILNGV 126
Query: 206 AYIHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
Y+H + + H D+KP+N+++ N ++K+ DFG A + G + + + AP
Sbjct: 127 YYLHS-LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 185
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
E++ D+WS+G + LL G F G++ + L + +N
Sbjct: 186 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVN 232
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ + F A A D + RLL P R T ++ HP+
Sbjct: 233 YEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 273
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 22/202 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-----LQDKRYKNRELQTMRLLDHPNVVSLKHCF 153
+G+GSFG VF+ T + VAIK + + +E+ + D P V +
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 154 FSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTY--QICRALAYIHGG 211
T L +++E++ + PL ++ T +I + L Y+H
Sbjct: 90 LKDTK-----LWIIMEYLG------GGSALDLLEPGPLDETQIATILREILKGLDYLHSE 138
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE-PNISYICSRYYRAPELIFGATE 270
+ HRDIK N+L++ H +VKL DFG A L + ++ + ++ APE+I +
Sbjct: 139 KKI-HRDIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSA 195
Query: 271 YTTAIDIWSVGCVLAELLLGQP 292
Y + DIWS+G EL G+P
Sbjct: 196 YDSKADIWSLGITAIELARGEP 217
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 141/365 (38%), Gaps = 90/365 (24%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL--------DHP 144
Y R +G G F V+ ++ VA+K V + Y L ++LL P
Sbjct: 33 YHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESDPSDP 92
Query: 145 N---VVSLKHCFFSTTDKDELYLNLVLEFVPETVYR--VAKHYSRASQRMPLIYVKLYTY 199
N VV L F + + +++ +V E + + + + +Y Q +P+ VK
Sbjct: 93 NKDMVVQLID-DFKISGMNGIHVCMVFEVLGHHLLKWIIKSNY----QGLPVRCVKSIIR 147
Query: 200 QICRALAYIHGGIGVCHRDIKPQN------------------------------------ 223
Q+ + L Y+H + H DIKP+N
Sbjct: 148 QVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVSTA 207
Query: 224 ----LLVNP------HTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTT 273
LLVNP +VK+ D G+A + K I +R YR+ E++ GA Y+T
Sbjct: 208 PAADLLVNPLDPRNADKIRVKIADLGNACWVHKH--FTEDIQTRQYRSIEVLIGAG-YST 264
Query: 274 AIDIWSVGCVLAELLLGQPLFPGESG------VDQLVEIIKVLGTPTREEIKCMNPNYTE 327
DIWS C+ EL G LF SG D + II++LG+ R ++ Y+
Sbjct: 265 PADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRH--FALSGKYSR 322
Query: 328 FKFPQ-------IKAHPW---HKIFHKRMPP-----EAVDLVSRLLQYSPNLRCTALEAC 372
F + K PW + K P + D + +L+ P R +A E
Sbjct: 323 EFFNRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECL 382
Query: 373 IHPFF 377
HP+
Sbjct: 383 RHPWL 387
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 102/223 (45%), Gaps = 22/223 (9%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKRYKNRELQTMRLLDHPNVV 147
++ ++GQG+ VF+ + +TG+ AIK L+ + RE + ++ L+H N+V
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALA 206
L TT + ++ L++EF P ++Y V + S A +P + + +
Sbjct: 71 KLFAIEEETTTRHKV---LIMEFCPCGSLYTVLEEPSNAYG-LPESEFLIVLRDVVGGMN 126
Query: 207 YIHGGIGVCHRDIKPQNLL--VNPHTHQV-KLCDFGSAKVLVKGEPNISYICSRYYRAPE 263
++ G+ HR+IKP N++ + V KL DFG+A+ L E + + Y P+
Sbjct: 127 HLREN-GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPD 185
Query: 264 LIFGAT-------EYTTAIDIWSVGCVLAELLLGQ-PLFPGES 298
+ A +Y +D+WS+G G P P E
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG 228
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 101/227 (44%), Gaps = 29/227 (12%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 147
+G G F IV + + TG+ A K ++ +R + RE+ +R + HPN++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYA-AKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 78
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+L F + TD + L+LE V E +A+ S + QI +
Sbjct: 79 TLHDIFENKTD-----VVLILELVSGGELFDFLAEKESLTEDE-----ATQFLKQILDGV 128
Query: 206 AYIHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
Y+H + H D+KP+N+++ N ++KL DFG A + G + + + AP
Sbjct: 129 HYLHSK-RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 187
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKV 309
E++ D+WS+G + LL G F GE+ + L I V
Sbjct: 188 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV 233
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 140/367 (38%), Gaps = 92/367 (25%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL--------DHP 144
Y R +G G F V+ + ++ + VA+K V + Y L +RLL + P
Sbjct: 23 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDP 82
Query: 145 N---VVSLKHCFFSTTDKDELYLNLVLEFVPETVYR--VAKHYSRASQRMPLIYVKLYTY 199
N VV L F + + ++ +V E + + + + +Y Q +PL VK
Sbjct: 83 NREMVVQLLDDF-KISGVNGTHICMVFEVLGHHLLKWIIKSNY----QGLPLPCVKKIIQ 137
Query: 200 QICRALAYIHGGIGVCHRDIKPQNLLV--------------------------------- 226
Q+ + L Y+H + H DIKP+N+L+
Sbjct: 138 QVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTA 197
Query: 227 ---------------NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 271
N +VK+ D G+A + K I +R YR+ E++ G+ Y
Sbjct: 198 PATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRSLEVLIGSG-Y 254
Query: 272 TTAIDIWSVGCVLAELLLGQPLFPGESG------VDQLVEIIKVLGTPTREEIKCMNPNY 325
T DIWS C+ EL G LF SG D + II++LG R+ I + Y
Sbjct: 255 NTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLI--VAGKY 312
Query: 326 TEFKFPQ-------IKAHPWHKI--------FHKRMPPEAVDLVSRLLQYSPNLRCTALE 370
++ F + K PW + + D + +L+ P R TA E
Sbjct: 313 SKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAE 372
Query: 371 ACIHPFF 377
HP+
Sbjct: 373 CLRHPWL 379
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 122/294 (41%), Gaps = 54/294 (18%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 147
+G G F +V + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+L + + TD + L+LE V E +A+ S + + QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEE-----ATEFLKQILNGV 127
Query: 206 AYIHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
Y+H + + H D+KP+N+++ N ++K+ DFG A + G + + + AP
Sbjct: 128 YYLHS-LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
E++ D+WS+G + LL G F G++ + L + +N
Sbjct: 187 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVN 233
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ + F A A D + RLL P R T ++ HP+
Sbjct: 234 YEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 22/202 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-----LQDKRYKNRELQTMRLLDHPNVVSLKHCF 153
+G+GSFG VF+ T + VAIK + + +E+ + D P V +
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 154 FSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTY--QICRALAYIHGG 211
T L +++E++ + PL ++ T +I + L Y+H
Sbjct: 75 LKDTK-----LWIIMEYLG------GGSALDLLEPGPLDETQIATILREILKGLDYLHSE 123
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE-PNISYICSRYYRAPELIFGATE 270
+ HRDIK N+L++ H +VKL DFG A L + ++ + ++ APE+I +
Sbjct: 124 KKI-HRDIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSA 180
Query: 271 YTTAIDIWSVGCVLAELLLGQP 292
Y + DIWS+G EL G+P
Sbjct: 181 YDSKADIWSLGITAIELARGEP 202
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 46/250 (18%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT-------MRLLDHPNVVSLK 150
V+GQG+FG V +A+ AIKK+ R+ +L T + L+H VV
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKI----RHTEEKLSTILSEVXLLASLNHQYVVRYY 68
Query: 151 HCFFS--------TTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQI 201
+ T K + L + E+ T+Y + + QR Y +L+ QI
Sbjct: 69 AAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDE--YWRLFR-QI 125
Query: 202 CRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK-------VLVKGEPNI--- 251
AL+YIH G+ HR++KP N+ ++ + VK+ DFG AK +L N+
Sbjct: 126 LEALSYIHSQ-GIIHRNLKPXNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 252 -----SYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEI 306
S I + Y A E++ G Y ID +S+G + E ++P +G ++ V I
Sbjct: 184 SDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE-----XIYPFSTGXER-VNI 237
Query: 307 IKVLGTPTRE 316
+K L + + E
Sbjct: 238 LKKLRSVSIE 247
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 126/318 (39%), Gaps = 51/318 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIK--KVLQDKRYK--------NRELQTMRLLDHPNVVS 148
+G G F IV + + TG A K K Q + + RE+ +R + HPN+++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L + + TD + L+LE V ++ S+ ++K QI + Y
Sbjct: 80 LHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK----QILDGVNY 130
Query: 208 IHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 264
+H + H D+KP+N+++ N +KL DFG A + G + + + APE+
Sbjct: 131 LHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 265 IFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 324
+ D+WS+G + LL G F G++ + L I V
Sbjct: 190 V-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV--------------- 233
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPN 384
++ + + F + A D + +LL R T EA HP+ + D
Sbjct: 234 ----------SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV-DTQ 282
Query: 385 ARLPNGRPFPPLFNFKPQ 402
+ L NFK Q
Sbjct: 283 QAMVRRESVVNLENFKKQ 300
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 90/191 (47%), Gaps = 27/191 (14%)
Query: 201 ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQV---KLCDFG-SAKVLVKGE------PN 250
+ AL ++H G+ HRD+KP+N+L H +QV K+CDFG + + + G+ P
Sbjct: 120 VASALDFLHNK-GIAHRDLKPENILCE-HPNQVSPVKICDFGLGSGIKLNGDCSPISTPE 177
Query: 251 ISYIC-SRYYRAPELIFGATE----YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVE 305
+ C S Y APE++ +E Y D+WS+G +L LL G P F G G D +
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWD 237
Query: 306 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLR 365
+ P + + + +++FP W I A DL+S+LL R
Sbjct: 238 --RGEACPACQNMLFESIQEGKYEFPD---KDWAHI-----SCAAKDLISKLLVRDAKQR 287
Query: 366 CTALEACIHPF 376
+A + HP+
Sbjct: 288 LSAAQVLQHPW 298
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 121/275 (44%), Gaps = 56/275 (20%)
Query: 99 VGQGSFGIVFQAKCL-----ETGETVAIKKVLQDKRY-KNRELQT-----MRLLDHPNVV 147
+G+G+FG V +A T TVA+K + + + ++R L + + + H NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 148 SL---------------KHCFFSTTDKDELYL----NLVLEFVPETVYRVAKHYSRASQR 188
+L + C F YL N + + PE +Y+
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLST---YLRSKRNEFVPYKPEDLYK---------DF 144
Query: 189 MPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 248
+ L ++ Y++Q+ + + ++ + HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 145 LTLEHLIXYSFQVAKGMEFLASRKXI-HRDLAARNILLS-EKNVVKICDFGLARDIXKDP 202
Query: 249 PNISYICSRY---YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLV 304
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 254
Query: 305 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 339
+I + +E + P+YT + Q WH
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 122/294 (41%), Gaps = 54/294 (18%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 147
+G G F +V + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+L + + TD + L+LE V E +A+ S + + QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEE-----ATEFLKQILNGV 127
Query: 206 AYIHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
Y+H + + H D+KP+N+++ N ++K+ DFG A + G + + + AP
Sbjct: 128 YYLHS-LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
E++ D+WS+G + LL G F G++ + L + +N
Sbjct: 187 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVN 233
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ + F A A D + RLL P R T ++ HP+
Sbjct: 234 YEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 122/294 (41%), Gaps = 54/294 (18%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 147
+G G F +V + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+L + + TD + L+LE V E +A+ S + + QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEE-----ATEFLKQILNGV 127
Query: 206 AYIHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
Y+H + + H D+KP+N+++ N ++K+ DFG A + G + + + AP
Sbjct: 128 YYLHS-LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAP 186
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
E++ D+WS+G + LL G F G++ + L + +N
Sbjct: 187 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVN 233
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ + F A A D + RLL P R T ++ HP+
Sbjct: 234 YEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVL------QDKRYKNRELQTM-RLLDHPNVVSLKH 151
+G GS+G VF+ + E G A+K+ + +D+ K E+ + ++ HP V L+
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQ 124
Query: 152 CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGG 211
+ + LYL L + +H +P V Y ALA++H
Sbjct: 125 AW---EEGGILYLQTEL-----CGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH-S 175
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFG--------SAKVLVKGEPNISYICSRYYRAPE 263
G+ H D+KP N+ + P + KL DFG A + +G+P Y APE
Sbjct: 176 QGLVHLDVKPANIFLGPRG-RCKLGDFGLLVELGTAGAGEVQEGDPR--------YMAPE 226
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQL 303
L+ G+ Y TA D++S+G + E+ L G G QL
Sbjct: 227 LLQGS--YGTAADVFSLGLTILEVACNMELPHGGEGWQQL 264
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 101/209 (48%), Gaps = 30/209 (14%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR------ELQTMRLLDHPNVVSLKHC 152
+G GSFG V +A+ G VA+K +++ + R E+ M+ L HPN+V
Sbjct: 45 IGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV----- 97
Query: 153 FFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG- 210
F L++V E++ ++YR+ H S A +++ Y + + + Y+H
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLL-HKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY------YRAPEL 264
+ HRD+K NLLV+ + VK+CDFG +++ ++ S+ + APE+
Sbjct: 157 NPPIVHRDLKSPNLLVD-KKYTVKVCDFGLSRLKAS-----XFLXSKXAAGTPEWMAPEV 210
Query: 265 IFGATEYTTAIDIWSVGCVLAEL-LLGQP 292
+ + D++S G +L EL L QP
Sbjct: 211 LRDEPSNEKS-DVYSFGVILWELATLQQP 238
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 110/243 (45%), Gaps = 40/243 (16%)
Query: 157 TDKDELYL-------NLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
T+ DE+Y+ + +L+F E + + K+Y+ +P+ +K + + +YIH
Sbjct: 113 TNYDEVYIIYEYMENDSILKF-DEYFFVLDKNYTCF---IPIQVIKCIIKSVLNSFSYIH 168
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGAT 269
+CHRD+KP N+L++ + +VKL DFG ++ +V + S + + PE +
Sbjct: 169 NEKNICHRDVKPSNILMDKNG-RVKLSDFGESEYMVDKKIKGSR-GTYEFMPPEFFSNES 226
Query: 270 EYTTA-IDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 328
Y A +DIWS+G L + F + LVE+ + T E
Sbjct: 227 SYNGAKVDIWSLGICLYVMFYNVVPFSLKIS---LVELFNNIRTKNIE------------ 271
Query: 329 KFPQIKAHPWHKIFHKR-------MPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELR 381
+P + H + + +K+ + E +D + L+ +P R T+ +A H + L
Sbjct: 272 -YPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEW---LA 327
Query: 382 DPN 384
D N
Sbjct: 328 DTN 330
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 27/206 (13%)
Query: 97 RVVGQGSFGIVFQAKCLET---GETVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 148
R +G+G FG V Q + VAIK K + + LQ TMR DHP++V
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
L ++ ++ +++E R + S + L + LY YQ+ ALAY+
Sbjct: 456 L----IGVITENPVW--IIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYL 507
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPE 263
V HRDI +N+LV+ T VKL DFG ++ + E + Y S+ + APE
Sbjct: 508 ESKRFV-HRDIAARNVLVSA-TDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPE 562
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLL 289
I +T+A D+W G + E+L+
Sbjct: 563 SI-NFRRFTSASDVWMFGVCMWEILM 587
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 106/222 (47%), Gaps = 16/222 (7%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMR----LLDHPNVVSLKHC 152
+V+G+G+FG V K + A+K + + + K E R +L + + +
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTL 139
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
++ D + LYL V+++ + S+ R+P + Y ++ A+ +H +
Sbjct: 140 HYAFQDDNNLYL--VMDYYVGG--DLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ-L 194
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISY-ICSRYYRAPELI----F 266
HRDIKP N+L++ + H ++L DFGS K++ G S + + Y +PE++
Sbjct: 195 HYVHRDIKPDNILMDMNGH-IRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEG 253
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIK 308
G Y D WS+G + E+L G+ F ES V+ +I+
Sbjct: 254 GKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 295
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 39/230 (16%)
Query: 85 GQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKRYKNRELQTMR 139
G+ Q S M+ +G G+FG V+ A E + V +K KVL+D ++ +L +
Sbjct: 20 GEYSQKYSTMSP--LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVT 77
Query: 140 L-------LDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRAS-----Q 187
L ++H N++ + F +++ + LV+E KH S
Sbjct: 78 LEIAILSRVEHANIIKVLDIF-----ENQGFFQLVME----------KHGSGLDLFAFID 122
Query: 188 RMPLIYVKLYTY---QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL 244
R P + L +Y Q+ A+ Y+ + HRDIK +N+++ +KL DFGSA L
Sbjct: 123 RHPRLDEPLASYIFRQLVSAVGYLRLK-DIIHRDIKDENIVI-AEDFTIKLIDFGSAAYL 180
Query: 245 VKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
+G+ ++ + Y APE++ G +++WS+G L L+ + F
Sbjct: 181 ERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 27/206 (13%)
Query: 97 RVVGQGSFGIVFQAKCLET---GETVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 148
R +G+G FG V Q + VAIK K + + LQ TMR DHP++V
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
L ++ ++ +++E R + S + L + LY YQ+ ALAY+
Sbjct: 76 L----IGVITENPVW--IIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYL 127
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPE 263
V HRDI +N+LV+ T VKL DFG ++ + E + Y S+ + APE
Sbjct: 128 ESKRFV-HRDIAARNVLVSA-TDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPE 182
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLL 289
I +T+A D+W G + E+L+
Sbjct: 183 SI-NFRRFTSASDVWMFGVCMWEILM 207
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 30/209 (14%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR------ELQTMRLLDHPNVVSLKHC 152
+G GSFG V +A+ G VA+K +++ + R E+ M+ L HPN+V
Sbjct: 45 IGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV----- 97
Query: 153 FFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG- 210
F L++V E++ ++YR+ H S A +++ Y + + + Y+H
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLL-HKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY------YRAPEL 264
+ HR++K NLLV+ + VK+CDFG +++ +++ S+ + APE+
Sbjct: 157 NPPIVHRNLKSPNLLVD-KKYTVKVCDFGLSRLKAS-----TFLSSKSAAGTPEWMAPEV 210
Query: 265 IFGATEYTTAIDIWSVGCVLAEL-LLGQP 292
+ + D++S G +L EL L QP
Sbjct: 211 LRDEPSNEKS-DVYSFGVILWELATLQQP 238
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 122/272 (44%), Gaps = 48/272 (17%)
Query: 99 VGQGSFGIVFQAKCL-----ETGETVAIKKVLQDKRY-KNRELQT-MRLL----DHPNVV 147
+G+G+FG V +A T TVA+K + + + ++R L + +++L H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 148 SL---------------KHCFFSTTDKDELYLNLVL-EFVPETVYRVAKHYSRASQRMPL 191
+L + C F YL EFVP Y+VA + L
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLST---YLRSKRNEFVP---YKVAPE-DLYKDFLTL 138
Query: 192 IYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 251
++ Y++Q+ + + ++ HRD+ +N+L++ + VK+CDFG A+ + K +
Sbjct: 139 EHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXV 196
Query: 252 SYICSRY---YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLVEII 307
+R + APE IF YT D+WS G +L E+ LG +PG V+I
Sbjct: 197 RKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKID 248
Query: 308 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 339
+ +E + P+YT + Q WH
Sbjct: 249 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 280
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 122/272 (44%), Gaps = 48/272 (17%)
Query: 99 VGQGSFGIVFQAKCL-----ETGETVAIKKVLQDKRY-KNRELQT-MRLL----DHPNVV 147
+G+G+FG V +A T TVA+K + + + ++R L + +++L H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 148 SL---------------KHCFFSTTDKDELYLNLVL-EFVPETVYRVAKHYSRASQRMPL 191
+L + C F YL EFVP Y+VA + L
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLST---YLRSKRNEFVP---YKVAPE-DLYKDFLTL 138
Query: 192 IYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 251
++ Y++Q+ + + ++ HRD+ +N+L++ + VK+CDFG A+ + K +
Sbjct: 139 EHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXV 196
Query: 252 SYICSRY---YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLVEII 307
+R + APE IF YT D+WS G +L E+ LG +PG V+I
Sbjct: 197 RKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKID 248
Query: 308 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 339
+ +E + P+YT + Q WH
Sbjct: 249 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 280
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 123/279 (44%), Gaps = 35/279 (12%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVL--------QDKRYKNRELQTMRLLDHP 144
Y+ ++G+GS+G V + ET A+K + + +E+Q +R L H
Sbjct: 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHK 66
Query: 145 NVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRA 204
NV+ L ++ +K ++Y+ V+E+ + + S +R P+ Y Q+
Sbjct: 67 NVIQLVDVLYNE-EKQKMYM--VMEYCVCGMQEMLD--SVPEKRFPVCQAHGYFCQLIDG 121
Query: 205 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRA 261
L Y+H G+ H+DIKP NLL+ +K+ G A+ L + + S ++
Sbjct: 122 LEYLHSQ-GIVHKDIKPGNLLLT-TGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQP 179
Query: 262 PELIFGATEYTT-AIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKV--------LGT 312
PE+ G ++ +DIWS G L + G F G++ + +L E I G
Sbjct: 180 PEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-IYKLFENIGKGSYAIPGDCGP 238
Query: 313 PTREEIKCM---NPNYTEFKFPQIKAHPWHKIFHKRMPP 348
P + +K M P F QI+ H W F K+ PP
Sbjct: 239 PLSDLLKGMLEYEPA-KRFSIRQIRQHSW---FRKKHPP 273
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 26/217 (11%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLETGET---VAIKKV-----LQDKRYKNRELQTM 138
P + + ++RV+G+G FG+V+ + ++ + AIK + +Q RE M
Sbjct: 17 PHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLM 76
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKL-Y 197
R L+HPNV++L + L P + + R+ QR P + + +
Sbjct: 77 RGLNHPNVLALIGIMLPPEGLPHVLL-------PYMCHGDLLQFIRSPQRNPTVKDLISF 129
Query: 198 TYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
Q+ R + Y+ HRD+ +N +++ + VK+ DFG A+ ++ E S R
Sbjct: 130 GLQVARGMEYL-AEQKFVHRDLAARNCMLD-ESFTVKVADFGLARDILDRE-YYSVQQHR 186
Query: 258 YYRAPELIFGATE------YTTAIDIWSVGCVLAELL 288
+ R P + + A E +TT D+WS G +L ELL
Sbjct: 187 HARLP-VKWTALESLQTYRFTTKSDVWSFGVLLWELL 222
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 48/272 (17%)
Query: 99 VGQGSFGIVFQAKCL-----ETGETVAIKKVLQDKRY-KNRELQT-----MRLLDHPNVV 147
+G+G+FG V +A T TVA+K + + + ++R L + + + H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 148 SL---------------KHCFFSTTDKDELYLNLVL-EFVPETVYRVAKHYSRASQRMPL 191
+L + C F YL EFVP Y+VA + L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLST---YLRSKRNEFVP---YKVAPE-DLYKDFLTL 147
Query: 192 IYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 251
++ Y++Q+ + + ++ HRD+ +N+L++ + VK+CDFG A+ + K +
Sbjct: 148 EHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXV 205
Query: 252 SYICSRY---YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLVEII 307
+R + APE IF YT D+WS G +L E+ LG +PG V+I
Sbjct: 206 RKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKID 257
Query: 308 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 339
+ +E + P+YT + Q WH
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 107/222 (48%), Gaps = 16/222 (7%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFST 156
+V+G+G+FG V K T A+K + + + K E R + +V+ C + T
Sbjct: 96 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFR--EERDVLVNGDCQWIT 153
Query: 157 T----DKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+DE +L LV+++ + S+ ++P + Y ++ A+ IH +
Sbjct: 154 ALHYAFQDENHLYLVMDYYVGG--DLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ-L 210
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISY-ICSRYYRAPELI----F 266
HRDIKP N+L++ + H ++L DFGS K+ G S + + Y +PE++
Sbjct: 211 HYVHRDIKPDNVLLDVNGH-IRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMED 269
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIK 308
G +Y D WS+G + E+L G+ F ES V+ +I+
Sbjct: 270 GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 311
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 117/267 (43%), Gaps = 40/267 (14%)
Query: 98 VVGQ-GSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE-----LQTMRLLDHPNVVSLKH 151
++G+ G FG V++A+ ET +A KV+ K + E + + DHPN+V L
Sbjct: 16 IIGELGDFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 74
Query: 152 CFFSTTDKDELYLNLVLEFVP-ETVYRVAKHYSRASQRMPLI--YVKLYTYQICRALAYI 208
F+ + L +++EF V V R PL +++ Q AL Y+
Sbjct: 75 AFYYENN-----LWILIEFCAGGAVDAVMLELER-----PLTESQIQVVCKQTLDALNYL 124
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAK-VLVKGEPNISYICSRYYRAPELIF 266
H + HRD+K N+L +KL DFG SAK + S+I + Y+ APE++
Sbjct: 125 HDN-KIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVM 182
Query: 267 GATE----YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIK----VLGTPTREEI 318
T Y D+WS+G L E+ +P + + L++I K L P+R
Sbjct: 183 CETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSS 242
Query: 319 -------KCMNPNY-TEFKFPQIKAHP 337
KC+ N + Q+ HP
Sbjct: 243 NFKDFLKKCLEKNVDARWTTSQLLQHP 269
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 48/272 (17%)
Query: 99 VGQGSFGIVFQAKCL-----ETGETVAIKKVLQDKRY-KNRELQT-----MRLLDHPNVV 147
+G+G+FG V +A T TVA+K + + + ++R L + + + H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 148 SL---------------KHCFFSTTDKDELYLNLVL-EFVPETVYRVAKHYSRASQRMPL 191
+L + C F YL EFVP Y+VA + L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLST---YLRSKRNEFVP---YKVAPE-DLYKDFLTL 147
Query: 192 IYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 251
++ Y++Q+ + + ++ HRD+ +N+L++ + VK+CDFG A+ + K +
Sbjct: 148 EHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDXV 205
Query: 252 SYICSRY---YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLVEII 307
+R + APE IF YT D+WS G +L E+ LG +PG V+I
Sbjct: 206 RKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKID 257
Query: 308 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 339
+ +E + P+YT + Q WH
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 97 RVVGQGSFGIVFQAKCLETGE---TVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 148
R +G+G FG V Q + VAIK K + + LQ TMR DHP++V
Sbjct: 19 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 78
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L ++ +++ + L + E + + YS + L + LY YQ+ ALAY
Sbjct: 79 L----IGVITENPVWIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAY 129
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 262
+ V HRDI +N+LV+ + VKL DFG ++ + E + Y S+ + AP
Sbjct: 130 LESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAP 184
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLL 289
E I +T+A D+W G + E+L+
Sbjct: 185 ESI-NFRRFTSASDVWMFGVCMWEILM 210
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 97 RVVGQGSFGIVFQAKCLET---GETVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 148
R +G+G FG V Q + VAIK K + + LQ TMR DHP++V
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L ++ +++ + L + E + + YS + L + LY YQ+ ALAY
Sbjct: 76 L----IGVITENPVWIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAY 126
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 262
+ V HRDI +N+LV+ + VKL DFG ++ + E + Y S+ + AP
Sbjct: 127 LESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAP 181
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLL 289
E I +T+A D+W G + E+L+
Sbjct: 182 ESI-NFRRFTSASDVWMFGVCMWEILM 207
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 107/222 (48%), Gaps = 16/222 (7%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFST 156
+V+G+G+FG V K T A+K + + + K E R + +V+ C + T
Sbjct: 80 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFR--EERDVLVNGDCQWIT 137
Query: 157 T----DKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+DE +L LV+++ + S+ ++P + Y ++ A+ IH +
Sbjct: 138 ALHYAFQDENHLYLVMDYYVGG--DLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ-L 194
Query: 213 GVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISY-ICSRYYRAPELI----F 266
HRDIKP N+L++ + H ++L DFGS K+ G S + + Y +PE++
Sbjct: 195 HYVHRDIKPDNVLLDVNGH-IRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMED 253
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIK 308
G +Y D WS+G + E+L G+ F ES V+ +I+
Sbjct: 254 GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 295
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 97 RVVGQGSFGIVFQAKCLETGE---TVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 148
R +G+G FG V Q + VAIK K + + LQ TMR DHP++V
Sbjct: 18 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 77
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L ++ +++ + L + E + + YS + L + LY YQ+ ALAY
Sbjct: 78 L----IGVITENPVWIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAY 128
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 262
+ V HRDI +N+LV+ + VKL DFG ++ + E + Y S+ + AP
Sbjct: 129 LESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAP 183
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLL 289
E I +T+A D+W G + E+L+
Sbjct: 184 ESI-NFRRFTSASDVWMFGVCMWEILM 209
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 38/220 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNREL---------QTMRLLDHPNVVSL 149
+G+G FG+VF+AK AIK++ R NREL + + L+HP +V
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRI----RLPNRELAREKVMREVKALAKLEHPGIVRY 68
Query: 150 KHCFF--STTDK-----DELYLNLVLEFV-PETVYRVAKHYSRASQRMPLIYVKLYTYQI 201
+ + +TT+K ++YL + ++ E + +R + + ++ QI
Sbjct: 69 FNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF-LQI 127
Query: 202 CRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE-------PNISY- 253
A+ ++H G+ HRD+KP N+ VK+ DFG + + E P +Y
Sbjct: 128 AEAVEFLHSK-GLMHRDLKPSNIFFT-MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 254 -----ICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELL 288
+ ++ Y +PE I G + Y+ +DI+S+G +L ELL
Sbjct: 186 RHTGQVGTKLYMSPEQIHGNS-YSHKVDIFSLGLILFELL 224
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 97 RVVGQGSFGIVFQAKCLETGE---TVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 148
R +G+G FG V Q + VAIK K + + LQ TMR DHP++V
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L ++ +++ + L + E + + YS + L + LY YQ+ ALAY
Sbjct: 73 L----IGVITENPVWIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAY 123
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 262
+ V HRDI +N+LV+ + VKL DFG ++ + E + Y S+ + AP
Sbjct: 124 LESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAP 178
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLL 289
E I +T+A D+W G + E+L+
Sbjct: 179 ESI-NFRRFTSASDVWMFGVCMWEILM 204
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 130/325 (40%), Gaps = 51/325 (15%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIK--KVLQDKRYK--------NRELQTMRLLDHPNVVS 148
+G G F IV + + TG A K K Q + + RE+ +R + H NV++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L + + TD + L+LE V ++ S+ ++K QI + Y
Sbjct: 80 LHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK----QILDGVNY 130
Query: 208 IHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 264
+H + H D+KP+N+++ N +KL DFG A + G + + + APE+
Sbjct: 131 LHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 265 IFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 324
+ D+WS+G + LL G F G++ + L I V
Sbjct: 190 V-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV--------------- 233
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPN 384
++ + + F + A D + +LL R T EA HP+ + +
Sbjct: 234 ----------SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQ 283
Query: 385 ARLPNGRPFPPLFNFKPQELKGASK 409
A + L NF+ Q ++ SK
Sbjct: 284 A-MVRRESVVNLENFRKQYVRRRSK 307
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 97 RVVGQGSFGIVFQAKCLETGE---TVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 148
R +G+G FG V Q + VAIK K + + LQ TMR DHP++V
Sbjct: 44 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 103
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L ++ +++ + L + E + + YS + L + LY YQ+ ALAY
Sbjct: 104 L----IGVITENPVWIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAY 154
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 262
+ V HRDI +N+LV+ + VKL DFG ++ + E + Y S+ + AP
Sbjct: 155 LESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAP 209
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLL 289
E I +T+A D+W G + E+L+
Sbjct: 210 ESI-NFRRFTSASDVWMFGVCMWEILM 235
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 97 RVVGQGSFGIVFQAKCLETGE---TVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 148
R +G+G FG V Q + VAIK K + + LQ TMR DHP++V
Sbjct: 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 80
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L ++ +++ + L + E + + YS + L + LY YQ+ ALAY
Sbjct: 81 L----IGVITENPVWIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAY 131
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 262
+ V HRDI +N+LV+ + VKL DFG ++ + E + Y S+ + AP
Sbjct: 132 LESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAP 186
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLL 289
E I +T+A D+W G + E+L+
Sbjct: 187 ESI-NFRRFTSASDVWMFGVCMWEILM 212
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 129/325 (39%), Gaps = 51/325 (15%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIK--KVLQDKRYK--------NRELQTMRLLDHPNVVS 148
+G G F IV + + TG A K K Q + + RE+ +R + H NV++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L + + TD + L+LE V ++ S+ ++K QI + Y
Sbjct: 80 LHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK----QILDGVNY 130
Query: 208 IHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 264
+H + H D+KP+N+++ N +KL DFG A + G + + + APE+
Sbjct: 131 LHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 265 IFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 324
+ D+WS+G + LL G F G++ + L I V
Sbjct: 190 V-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV--------------- 233
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPN 384
++ + + F A D + +LL R T EA HP+ + +
Sbjct: 234 ----------SYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQ 283
Query: 385 ARLPNGRPFPPLFNFKPQELKGASK 409
A + L NF+ Q ++ SK
Sbjct: 284 A-MVRRESVVNLENFRKQYVRRRSK 307
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 97 RVVGQGSFGIVFQAKCLETGE---TVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 148
R +G+G FG V Q + VAIK K + + LQ TMR DHP++V
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L ++ +++ + L + E + + YS + L + LY YQ+ ALAY
Sbjct: 76 L----IGVITENPVWIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAY 126
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 262
+ V HRDI +N+LV+ + VKL DFG ++ + E + Y S+ + AP
Sbjct: 127 LESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAP 181
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLL 289
E I +T+A D+W G + E+L+
Sbjct: 182 ESI-NFRRFTSASDVWMFGVCMWEILM 207
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 119/268 (44%), Gaps = 41/268 (15%)
Query: 99 VGQGSFGIVFQAKCL-----ETGETVAIKKVLQDKRY-KNRELQT-----MRLLDHPNVV 147
+G+G+FG V +A T TVA+K + + + ++R L + + + H NVV
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP---ETVYRVAKHYSRASQRMP---------LIYVK 195
+L K L +++EF + Y +K + P L ++
Sbjct: 96 NL----LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLI 151
Query: 196 LYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYIC 255
Y++Q+ + + ++ HRD+ +N+L++ + VK+CDFG A+ + K +
Sbjct: 152 CYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 256 SRY---YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIKVLG 311
+R + APE IF YT D+WS G +L E+ LG +PG V+I +
Sbjct: 210 ARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFC 261
Query: 312 TPTREEIKCMNPNYTEFKFPQIKAHPWH 339
+E + P+YT + Q WH
Sbjct: 262 RRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 121/294 (41%), Gaps = 54/294 (18%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 147
+G G F +V + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
+L + + TD + L+ E V E +A+ S + + QI +
Sbjct: 78 TLHEVYENKTD-----VILIGELVAGGELFDFLAEKESLTEEE-----ATEFLKQILNGV 127
Query: 206 AYIHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 262
Y+H + + H D+KP+N+++ N ++K+ DFG A + G + + + AP
Sbjct: 128 YYLHS-LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 322
E++ D+WS+G + LL G F G++ + L + +N
Sbjct: 187 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVN 233
Query: 323 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
+ + F A A D + RLL P R T ++ HP+
Sbjct: 234 YEFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 48/272 (17%)
Query: 99 VGQGSFGIVFQAKCL-----ETGETVAIKKVLQDKRY-KNRELQT-----MRLLDHPNVV 147
+G+G+FG V +A T TVA+K + + + ++R L + + + H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 148 SL---------------KHCFFSTTDKDELYLNLVL-EFVPETVYRVAKHYSRASQRMPL 191
+L + C F YL EFVP Y+VA + L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLST---YLRSKRNEFVP---YKVAPE-DLYKDFLTL 147
Query: 192 IYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 251
++ Y++Q+ + + ++ HRD+ +N+L++ + VK+CDFG A+ + K +
Sbjct: 148 EHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYV 205
Query: 252 SYICSRY---YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLVEII 307
+R + APE IF YT D+WS G +L E+ LG +PG V+I
Sbjct: 206 RKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKID 257
Query: 308 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 339
+ +E + P+YT + Q WH
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 121/269 (44%), Gaps = 42/269 (15%)
Query: 99 VGQGSFGIVFQAKCL-----ETGETVAIKKVLQDKRY-KNRELQT-----MRLLDHPNVV 147
+G+G+FG V +A T TVA+K + + + ++R L + + + H NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP----ETVYRVAKH----YSRASQRMPLIYVKL--- 196
+L K L +++EF T R ++ Y A + + ++ L
Sbjct: 97 NL----LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHL 152
Query: 197 --YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYI 254
Y++Q+ + + ++ HRD+ +N+L++ + VK+CDFG A+ + K +
Sbjct: 153 ICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKG 210
Query: 255 CSRY---YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIKVL 310
+R + APE IF YT D+WS G +L E+ LG +PG V+I +
Sbjct: 211 DARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEF 262
Query: 311 GTPTREEIKCMNPNYTEFKFPQIKAHPWH 339
+E + P+YT + Q WH
Sbjct: 263 CRRLKEGTRMRAPDYTTPEMYQTMLDCWH 291
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 27/206 (13%)
Query: 97 RVVGQGSFGIVFQAKCLET---GETVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 148
R +G+G FG V Q + VAIK K + + LQ TMR DHP++V
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
L ++ ++ +++E R + S + L + LY YQ+ ALAY+
Sbjct: 456 L----IGVITENPVW--IIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYL 507
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPE 263
V HRDI +N+LV+ + VKL DFG ++ + E + Y S+ + APE
Sbjct: 508 ESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPE 562
Query: 264 LIFGATEYTTAIDIWSVGCVLAELLL 289
I +T+A D+W G + E+L+
Sbjct: 563 SI-NFRRFTSASDVWMFGVCMWEILM 587
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 48/272 (17%)
Query: 99 VGQGSFGIVFQAKCL-----ETGETVAIKKVLQDKRY-KNRELQT-----MRLLDHPNVV 147
+G+G+FG V +A T TVA+K + + + ++R L + + + H NVV
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 148 SL---------------KHCFFSTTDKDELYLNLVL-EFVPETVYRVAKHYSRASQRMPL 191
+L + C F YL EFVP Y+VA + L
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLST---YLRSKRNEFVP---YKVAPE-DLYKDFLTL 184
Query: 192 IYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 251
++ Y++Q+ + + ++ HRD+ +N+L++ + VK+CDFG A+ + K +
Sbjct: 185 EHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYV 242
Query: 252 SYICSRY---YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLVEII 307
+R + APE IF YT D+WS G +L E+ LG +PG V+I
Sbjct: 243 RKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKID 294
Query: 308 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 339
+ +E + P+YT + Q WH
Sbjct: 295 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 326
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 48/272 (17%)
Query: 99 VGQGSFGIVFQAKCL-----ETGETVAIKKVLQDKRY-KNRELQT-----MRLLDHPNVV 147
+G+G+FG V +A T TVA+K + + + ++R L + + + H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 148 SL---------------KHCFFSTTDKDELYLNLVL-EFVPETVYRVAKHYSRASQRMPL 191
+L + C F YL EFVP Y+VA + L
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLST---YLRSKRNEFVP---YKVAPE-DLYKDFLTL 138
Query: 192 IYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 251
++ Y++Q+ + + ++ HRD+ +N+L++ + VK+CDFG A+ + K +
Sbjct: 139 EHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYV 196
Query: 252 SYICSRY---YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLVEII 307
+R + APE IF YT D+WS G +L E+ LG +PG V+I
Sbjct: 197 RKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKID 248
Query: 308 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 339
+ +E + P+YT + Q WH
Sbjct: 249 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 280
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 48/272 (17%)
Query: 99 VGQGSFGIVFQAKCL-----ETGETVAIKKVLQDKRY-KNRELQT-----MRLLDHPNVV 147
+G+G+FG V +A T TVA+K + + + ++R L + + + H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 148 SL---------------KHCFFSTTDKDELYLNLVL-EFVPETVYRVAKHYSRASQRMPL 191
+L + C F YL EFVP Y+VA + L
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLST---YLRSKRNEFVP---YKVAPE-DLYKDFLTL 138
Query: 192 IYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 251
++ Y++Q+ + + ++ HRD+ +N+L++ + VK+CDFG A+ + K +
Sbjct: 139 EHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYV 196
Query: 252 SYICSRY---YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLVEII 307
+R + APE IF YT D+WS G +L E+ LG +PG V+I
Sbjct: 197 RKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKID 248
Query: 308 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 339
+ +E + P+YT + Q WH
Sbjct: 249 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 280
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 15/267 (5%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT---- 137
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 28 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 138 -MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YV 194
M ++ V S D E + VL + E V + ++R L
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELA 144
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYI 254
+ + +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K +
Sbjct: 145 RSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFD 202
Query: 255 CSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTP 313
+R Y PE I + + +WS+G +L +++ G P E + V + + +
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSE 262
Query: 314 TREEIK-CMNPNYTEF-KFPQIKAHPW 338
+ I+ C+ ++ F +I+ HPW
Sbjct: 263 CQHLIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 15/267 (5%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT---- 137
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 28 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 138 -MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YV 194
M ++ V S D E + VL + E V + ++R L
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELA 144
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYI 254
+ + +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K +
Sbjct: 145 RSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFD 202
Query: 255 CSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTP 313
+R Y PE I + + +WS+G +L +++ G P E + V + + +
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSE 262
Query: 314 TREEIK-CMNPNYTEF-KFPQIKAHPW 338
+ I+ C+ ++ F +I+ HPW
Sbjct: 263 CQHLIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 15/267 (5%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT---- 137
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 35 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 93
Query: 138 -MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YV 194
M ++ V S D E + VL + E V + ++R L
Sbjct: 94 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELA 151
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYI 254
+ + +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K +
Sbjct: 152 RSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFD 209
Query: 255 CSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTP 313
+R Y PE I + + +WS+G +L +++ G P E + V + + +
Sbjct: 210 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 269
Query: 314 TREEIK-CMNPNYTEF-KFPQIKAHPW 338
+ I+ C+ ++ F +I+ HPW
Sbjct: 270 CQHLIRWCLALRPSDRPTFEEIQNHPW 296
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 15/267 (5%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT---- 137
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 16 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 74
Query: 138 -MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YV 194
M ++ V S D E + VL + E V + ++R L
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELA 132
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYI 254
+ + +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K +
Sbjct: 133 RSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFD 190
Query: 255 CSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTP 313
+R Y PE I + + +WS+G +L +++ G P E + V + + +
Sbjct: 191 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 250
Query: 314 TREEIK-CMNPNYTEF-KFPQIKAHPW 338
+ I+ C+ ++ F +I+ HPW
Sbjct: 251 CQHLIRWCLALRPSDRPTFEEIQNHPW 277
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 15/267 (5%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT---- 137
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 29 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 138 -MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YV 194
M ++ V S D E + VL + E V + ++R L
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELA 145
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYI 254
+ + +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K +
Sbjct: 146 RSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFD 203
Query: 255 CSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTP 313
+R Y PE I + + +WS+G +L +++ G P E + V + + +
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSE 263
Query: 314 TREEIK-CMNPNYTEF-KFPQIKAHPW 338
+ I+ C+ ++ F +I+ HPW
Sbjct: 264 CQHLIRWCLALRPSDRPTFEEIQNHPW 290
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 15/267 (5%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT---- 137
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 29 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 138 -MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YV 194
M ++ V S D E + VL + E V + ++R L
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELA 145
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYI 254
+ + +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K +
Sbjct: 146 RSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFD 203
Query: 255 CSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTP 313
+R Y PE I + + +WS+G +L +++ G P E + V + + +
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSE 263
Query: 314 TREEIK-CMNPNYTEF-KFPQIKAHPW 338
+ I+ C+ ++ F +I+ HPW
Sbjct: 264 CQHLIRWCLALRPSDRPTFEEIQNHPW 290
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 15/267 (5%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT---- 137
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 28 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 138 -MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YV 194
M ++ V S D E + VL + E V + ++R L
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELA 144
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYI 254
+ + +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K +
Sbjct: 145 RSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFD 202
Query: 255 CSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTP 313
+R Y PE I + + +WS+G +L +++ G P E + V + + +
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 262
Query: 314 TREEIK-CMNPNYTEF-KFPQIKAHPW 338
+ I+ C+ ++ F +I+ HPW
Sbjct: 263 CQHLIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 15/267 (5%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT---- 137
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 15 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 73
Query: 138 -MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YV 194
M ++ V S D E + VL + E V + ++R L
Sbjct: 74 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELA 131
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYI 254
+ + +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K +
Sbjct: 132 RSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFD 189
Query: 255 CSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTP 313
+R Y PE I + + +WS+G +L +++ G P E + V + + +
Sbjct: 190 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 249
Query: 314 TREEIK-CMNPNYTEF-KFPQIKAHPW 338
+ I+ C+ ++ F +I+ HPW
Sbjct: 250 CQHLIRWCLALRPSDRPTFEEIQNHPW 276
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 27/191 (14%)
Query: 201 ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQV---KLCDFG-SAKVLVKGE------PN 250
+ AL ++H G+ HRD+KP+N+L H +QV K+CDF + + + G+ P
Sbjct: 120 VASALDFLHNK-GIAHRDLKPENILCE-HPNQVSPVKICDFDLGSGIKLNGDCSPISTPE 177
Query: 251 ISYIC-SRYYRAPELIFGATE----YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVE 305
+ C S Y APE++ +E Y D+WS+G +L LL G P F G G D +
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWD 237
Query: 306 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLR 365
+ P + + + +++FP W I A DL+S+LL R
Sbjct: 238 --RGEACPACQNMLFESIQEGKYEFPD---KDWAHI-----SCAAKDLISKLLVRDAKQR 287
Query: 366 CTALEACIHPF 376
+A + HP+
Sbjct: 288 LSAAQVLQHPW 298
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 15/267 (5%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT---- 137
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 43 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 101
Query: 138 -MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YV 194
M ++ V S D E + VL + E V + ++R L
Sbjct: 102 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELA 159
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYI 254
+ + +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K +
Sbjct: 160 RSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFD 217
Query: 255 CSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTP 313
+R Y PE I + + +WS+G +L +++ G P E + V + + +
Sbjct: 218 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 277
Query: 314 TREEIK-CMNPNYTEF-KFPQIKAHPW 338
+ I+ C+ ++ F +I+ HPW
Sbjct: 278 CQHLIRWCLALRPSDRPTFEEIQNHPW 304
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 114/256 (44%), Gaps = 14/256 (5%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT-----MRLLDHPNVV 147
Y ++G G FG V+ + VAIK V +D+ EL M ++ V
Sbjct: 10 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 69
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YVKLYTYQICRAL 205
S D E + VL + E + V + ++R L + + +Q+ A+
Sbjct: 70 SGFSGVIRLLDWFERPDSFVL--ILERMEPVQDLFDFITERGALQEELARSFFWQVLEAV 127
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
+ H GV HRDIK +N+L++ + ++KL DFGS L+K + +R Y PE I
Sbjct: 128 RHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 185
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIK-CMNP 323
+ + +WS+G +L +++ G P E + V + + + + I+ C+
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 245
Query: 324 NYTEF-KFPQIKAHPW 338
++ F +I+ HPW
Sbjct: 246 RPSDRPTFEEIQNHPW 261
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 38/265 (14%)
Query: 99 VGQGSFGIVFQAKCL-----ETGETVAIKKVLQDKRY-KNRELQT-----MRLLDHPNVV 147
+G+G+FG V +A T TVA+K + + + ++R L + + + H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP----ETVYRVAK-----HYSRASQRMPLIYVKLYT 198
+L K L +++EF T R + + + L ++ Y+
Sbjct: 95 NL----LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYS 150
Query: 199 YQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY 258
+Q+ + + ++ + HRD+ +N+L++ + VK+CDFG A+ + K + +R
Sbjct: 151 FQVAKGMEFLASRKXI-HRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 259 ---YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGTPT 314
+ APE IF YT D+WS G +L E+ LG +PG V+I +
Sbjct: 209 PLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCRRL 260
Query: 315 REEIKCMNPNYTEFKFPQIKAHPWH 339
+E + P+YT + Q WH
Sbjct: 261 KEGTRMRAPDYTTPEMYQTMLDCWH 285
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 118/267 (44%), Gaps = 15/267 (5%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT---- 137
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 28 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 138 -MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YV 194
M ++ V S D E + VL + E V + ++R L
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELA 144
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYI 254
+ + +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K +
Sbjct: 145 RSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFD 202
Query: 255 CSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTP 313
+R Y PE I + + +WS+G +L +++ G P E + V + +
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXE 262
Query: 314 TREEIK-CMNPNYTEF-KFPQIKAHPW 338
+ I+ C+ ++ F +I+ HPW
Sbjct: 263 CQHLIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 125/291 (42%), Gaps = 38/291 (13%)
Query: 94 MAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCF 153
++++V+G G G V + TG+ A+K + + + + P++V + +
Sbjct: 13 LSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVY 72
Query: 154 FSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICR----ALAYIH 209
+ L +++E + + +SR +R + + +I R A+ ++H
Sbjct: 73 ENMHHGKRCLL-IIMECM-----EGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH 126
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELIF 266
+ HRD+KP+NLL +KL DFG AK + + C + YY APE +
Sbjct: 127 SH-NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA--LQTPCYTPYYVAPE-VL 182
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
G +Y + D+WS+G ++ LL G P F +G + + + I+
Sbjct: 183 GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTG--------QAISPGMKRRIRL-----G 229
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
++ FP + W ++ +A L+ LL+ P R T + HP+
Sbjct: 230 QYGFPNPE---WSEV-----SEDAKQLIRLLLKTDPTERLTITQFMNHPWI 272
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 125/291 (42%), Gaps = 38/291 (13%)
Query: 94 MAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCF 153
++++V+G G G V + TG+ A+K + + + + P++V + +
Sbjct: 32 LSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVY 91
Query: 154 FSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICR----ALAYIH 209
+ L +++E + + +SR +R + + +I R A+ ++H
Sbjct: 92 ENMHHGKRCLL-IIMECM-----EGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH 145
Query: 210 GGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELIF 266
+ HRD+KP+NLL +KL DFG AK + + C + YY APE +
Sbjct: 146 SH-NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA--LQTPCYTPYYVAPE-VL 201
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
G +Y + D+WS+G ++ LL G P F +G + + + I+
Sbjct: 202 GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTG--------QAISPGMKRRIRL-----G 248
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 377
++ FP + W ++ +A L+ LL+ P R T + HP+
Sbjct: 249 QYGFPNPE---WSEV-----SEDAKQLIRLLLKTDPTERLTITQFMNHPWI 291
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 118/267 (44%), Gaps = 15/267 (5%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT---- 137
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 29 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 138 -MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YV 194
M ++ V S D E + VL + E V + ++R L
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELA 145
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYI 254
+ + +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K +
Sbjct: 146 RSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFD 203
Query: 255 CSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTP 313
+R Y PE I + + +WS+G +L +++ G P E + V + +
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXE 263
Query: 314 TREEIK-CMNPNYTEF-KFPQIKAHPW 338
+ I+ C+ ++ F +I+ HPW
Sbjct: 264 CQHLIRWCLALRPSDRPTFEEIQNHPW 290
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 118/267 (44%), Gaps = 15/267 (5%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT---- 137
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 29 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 138 -MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YV 194
M ++ V S D E + VL + E V + ++R L
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELA 145
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYI 254
+ + +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K +
Sbjct: 146 RSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFD 203
Query: 255 CSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTP 313
+R Y PE I + + +WS+G +L +++ G P E + V + +
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXE 263
Query: 314 TREEIK-CMNPNYTEF-KFPQIKAHPW 338
+ I+ C+ ++ F +I+ HPW
Sbjct: 264 CQHLIRWCLALRPSDRPTFEEIQNHPW 290
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 118/267 (44%), Gaps = 15/267 (5%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT---- 137
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 16 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 74
Query: 138 -MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YV 194
M ++ V S D E + VL + E V + ++R L
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELA 132
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYI 254
+ + +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K +
Sbjct: 133 RSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFD 190
Query: 255 CSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTP 313
+R Y PE I + + +WS+G +L +++ G P E + V + +
Sbjct: 191 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXE 250
Query: 314 TREEIK-CMNPNYTEF-KFPQIKAHPW 338
+ I+ C+ ++ F +I+ HPW
Sbjct: 251 CQHLIRWCLALRPSDRPTFEEIQNHPW 277
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 118/267 (44%), Gaps = 15/267 (5%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT---- 137
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 15 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 73
Query: 138 -MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YV 194
M ++ V S D E + VL + E V + ++R L
Sbjct: 74 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELA 131
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYI 254
+ + +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K +
Sbjct: 132 RSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFD 189
Query: 255 CSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTP 313
+R Y PE I + + +WS+G +L +++ G P E + V + +
Sbjct: 190 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXE 249
Query: 314 TREEIK-CMNPNYTEF-KFPQIKAHPW 338
+ I+ C+ ++ F +I+ HPW
Sbjct: 250 CQHLIRWCLALRPSDRPTFEEIQNHPW 276
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 118/267 (44%), Gaps = 15/267 (5%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT---- 137
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 43 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 101
Query: 138 -MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YV 194
M ++ V S D E + VL + E V + ++R L
Sbjct: 102 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELA 159
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYI 254
+ + +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K +
Sbjct: 160 RSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFD 217
Query: 255 CSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTP 313
+R Y PE I + + +WS+G +L +++ G P E + V + +
Sbjct: 218 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXE 277
Query: 314 TREEIK-CMNPNYTEF-KFPQIKAHPW 338
+ I+ C+ ++ F +I+ HPW
Sbjct: 278 CQHLIRWCLALRPSDRPTFEEIQNHPW 304
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 97 RVVGQGSFGIVFQAKCLET---GETVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 148
R +G+G FG V Q + VAIK K + + LQ TMR DHP++V
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
L ++ ++ +++E R + S + L + LY YQ+ ALAY+
Sbjct: 76 L----IGVITENPVW--IIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYL 127
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL--------VKGEPNISYICSRYYR 260
V HRDI +N+LV+ + VKL DFG ++ + KG+ I ++
Sbjct: 128 ESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTXXKASKGKLPIKWM------ 179
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLL 289
APE I +T+A D+W G + E+L+
Sbjct: 180 APESI-NFRRFTSASDVWMFGVCMWEILM 207
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 12/217 (5%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT---- 137
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 16 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 74
Query: 138 -MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YV 194
M ++ V S D E + VL + E V + ++R L
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELA 132
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYI 254
+ + +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K +
Sbjct: 133 RSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFD 190
Query: 255 CSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQ 291
+R Y PE I + + +WS+G +L +++ G
Sbjct: 191 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 227
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 118/267 (44%), Gaps = 15/267 (5%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT---- 137
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 48 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 106
Query: 138 -MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YV 194
M ++ V S D E + VL + E V + ++R L
Sbjct: 107 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELA 164
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYI 254
+ + +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K +
Sbjct: 165 RSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFD 222
Query: 255 CSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTP 313
+R Y PE I + + +WS+G +L +++ G P E + V + +
Sbjct: 223 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXE 282
Query: 314 TREEIK-CMNPNYTEF-KFPQIKAHPW 338
+ I+ C+ ++ F +I+ HPW
Sbjct: 283 CQHLIRWCLALRPSDRPTFEEIQNHPW 309
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 126/318 (39%), Gaps = 51/318 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIK--KVLQDKRYK--------NRELQTMRLLDHPNVVS 148
+G G F IV + + TG A K K Q + + RE+ +R + H NV++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L + + TD + L+LE V ++ S+ ++K QI + Y
Sbjct: 80 LHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK----QILDGVNY 130
Query: 208 IHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 264
+H + H D+KP+N+++ N +KL DFG A + G + + + APE+
Sbjct: 131 LHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 265 IFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 324
+ D+WS+G + LL G F G++ + L I V
Sbjct: 190 V-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV--------------- 233
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPN 384
++ + + F + A D + +LL R T EA HP+ + +
Sbjct: 234 ----------SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQ 283
Query: 385 ARLPNGRPFPPLFNFKPQ 402
A + L NF+ Q
Sbjct: 284 A-MVRRESVVNLENFRKQ 300
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 14/256 (5%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT-----MRLLDHPNVV 147
Y ++G G FG V+ + VAIK V +D+ EL M ++ V
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YVKLYTYQICRAL 205
S D E + VL + E V + ++R L + + +Q+ A+
Sbjct: 71 SGFSGVIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 128
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
+ H GV HRDIK +N+L++ + ++KL DFGS L+K + +R Y PE I
Sbjct: 129 RHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 186
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIK-CMNP 323
+ + +WS+G +L +++ G P E + V + + + + I+ C+
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 246
Query: 324 NYTEF-KFPQIKAHPW 338
++ F +I+ HPW
Sbjct: 247 RPSDRPTFEEIQNHPW 262
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 116/292 (39%), Gaps = 50/292 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIK--KVLQDKRYK--------NRELQTMRLLDHPNVVS 148
+G G F IV + + TG A K K Q + + RE+ +R + H NV++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L + + TD + L+LE V ++ S+ ++K QI + Y
Sbjct: 80 LHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK----QILDGVNY 130
Query: 208 IHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 264
+H + H D+KP+N+++ N +KL DFG A + G + + + APE+
Sbjct: 131 LHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 265 IFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 324
+ D+WS+G + LL G F G++ + L I V
Sbjct: 190 V-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV--------------- 233
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 376
++ + + F A D + +LL R T EA HP+
Sbjct: 234 ----------SYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 14/256 (5%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT-----MRLLDHPNVV 147
Y ++G G FG V+ + VAIK V +D+ EL M ++ V
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YVKLYTYQICRAL 205
S D E + VL + E V + ++R L + + +Q+ A+
Sbjct: 66 SGFSGVIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 123
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
+ H GV HRDIK +N+L++ + ++KL DFGS L+K + +R Y PE I
Sbjct: 124 RHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 181
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIK-CMNP 323
+ + +WS+G +L +++ G P E + V + + + + I+ C+
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLAL 241
Query: 324 NYTEF-KFPQIKAHPW 338
++ F +I+ HPW
Sbjct: 242 RPSDRPTFEEIQNHPW 257
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 14/256 (5%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT-----MRLLDHPNVV 147
Y ++G G FG V+ + VAIK V +D+ EL M ++ V
Sbjct: 10 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 69
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YVKLYTYQICRAL 205
S D E + VL + E V + ++R L + + +Q+ A+
Sbjct: 70 SGFSGVIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 127
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
+ H GV HRDIK +N+L++ + ++KL DFGS L+K + +R Y PE I
Sbjct: 128 RHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 185
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIK-CMNP 323
+ + +WS+G +L +++ G P E + V + + + + I+ C+
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 245
Query: 324 NYTEF-KFPQIKAHPW 338
++ F +I+ HPW
Sbjct: 246 RPSDRPTFEEIQNHPW 261
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 125/318 (39%), Gaps = 51/318 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIK--KVLQDKRYK--------NRELQTMRLLDHPNVVS 148
+G G F IV + + TG A K K Q + + RE+ +R + H NV++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L + + TD + L+LE V ++ S+ ++K QI + Y
Sbjct: 80 LHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK----QILDGVNY 130
Query: 208 IHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 264
+H + H D+KP+N+++ N +KL DFG A + G + + + APE+
Sbjct: 131 LHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 265 IFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 324
+ D+WS+G + LL G F G++ + L I V
Sbjct: 190 V-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV--------------- 233
Query: 325 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYELRDPN 384
++ + + F A D + +LL R T EA HP+ + +
Sbjct: 234 ----------SYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQ 283
Query: 385 ARLPNGRPFPPLFNFKPQ 402
A + L NF+ Q
Sbjct: 284 A-MVRRESVVNLENFRKQ 300
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 90/220 (40%), Gaps = 37/220 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLD---------- 142
Y ++G+G FG VF L VAIK + +NR L L D
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVI-----PRNRVLGWSPLSDSVTCPLEVAL 87
Query: 143 ---------HPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIY 193
HP V+ L +F T + L L E + +++ PL
Sbjct: 88 LWKVGAGGGHPGVIRLLD-WFETQEGFMLVL--------ERPLPAQDLFDYITEKGPLGE 138
Query: 194 --VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 251
+ + Q+ A+ + H GV HRDIK +N+L++ KL DFGS L+ EP
Sbjct: 139 GPSRCFFGQVVAAIQHCHSR-GVVHRDIKDENILIDLRRGCAKLIDFGSG-ALLHDEPYT 196
Query: 252 SYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQ 291
+ +R Y PE I + +WS+G +L +++ G
Sbjct: 197 DFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGD 236
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 14/256 (5%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT-----MRLLDHPNVV 147
Y ++G G FG V+ + VAIK V +D+ EL M ++ V
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YVKLYTYQICRAL 205
S D E + VL + E V + ++R L + + +Q+ A+
Sbjct: 71 SGFSGVIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 128
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
+ H GV HRDIK +N+L++ + ++KL DFGS L+K + +R Y PE I
Sbjct: 129 RHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 186
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIK-CMNP 323
+ + +WS+G +L +++ G P E + V + + + + I+ C+
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 246
Query: 324 NYTEF-KFPQIKAHPW 338
++ F +I+ HPW
Sbjct: 247 RPSDRPTFEEIQNHPW 262
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 22/202 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-----LQDKRYKNRELQTMRLLDHPNVVSLKHCF 153
+G+GSFG V++ T E VAIK + + +E+ + D P + +
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 154 FSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPL--IYVKLYTYQICRALAYIHGG 211
+T L +++E++ + PL Y+ +I + L Y+H
Sbjct: 87 LKSTK-----LWIIMEYLG------GGSALDLLKPGPLEETYIATILREILKGLDYLHSE 135
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE-PNISYICSRYYRAPELIFGATE 270
+ HRDIK N+L++ VKL DFG A L + ++ + ++ APE+I +
Sbjct: 136 RKI-HRDIKAANVLLSEQG-DVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSA 192
Query: 271 YTTAIDIWSVGCVLAELLLGQP 292
Y DIWS+G EL G+P
Sbjct: 193 YDFKADIWSLGITAIELAKGEP 214
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 14/256 (5%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT-----MRLLDHPNVV 147
Y ++G G FG V+ + VAIK V +D+ EL M ++ V
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YVKLYTYQICRAL 205
S D E + VL + E V + ++R L + + +Q+ A+
Sbjct: 71 SGFSGVIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 128
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
+ H GV HRDIK +N+L++ + ++KL DFGS L+K + +R Y PE I
Sbjct: 129 RHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 186
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIK-CMNP 323
+ + +WS+G +L +++ G P E + V + + + + I+ C+
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 246
Query: 324 NYTEF-KFPQIKAHPW 338
++ F +I+ HPW
Sbjct: 247 RPSDRPTFEEIQNHPW 262
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 14/256 (5%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT-----MRLLDHPNVV 147
Y ++G G FG V+ + VAIK V +D+ EL M ++ V
Sbjct: 9 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 68
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YVKLYTYQICRAL 205
S D E + VL + E V + ++R L + + +Q+ A+
Sbjct: 69 SGFSGVIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 126
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
+ H GV HRDIK +N+L++ + ++KL DFGS L+K + +R Y PE I
Sbjct: 127 RHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 184
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIK-CMNP 323
+ + +WS+G +L +++ G P E + V + + + + I+ C+
Sbjct: 185 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 244
Query: 324 NYTEF-KFPQIKAHPW 338
++ F +I+ HPW
Sbjct: 245 RPSDRPTFEEIQNHPW 260
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 14/256 (5%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT-----MRLLDHPNVV 147
Y ++G G FG V+ + VAIK V +D+ EL M ++ V
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YVKLYTYQICRAL 205
S D E + VL + E V + ++R L + + +Q+ A+
Sbjct: 66 SGFSGVIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 123
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
+ H GV HRDIK +N+L++ + ++KL DFGS L+K + +R Y PE I
Sbjct: 124 RHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 181
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIK-CMNP 323
+ + +WS+G +L +++ G P E + V + + + + I+ C+
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 241
Query: 324 NYTEF-KFPQIKAHPW 338
++ F +I+ HPW
Sbjct: 242 RPSDRPTFEEIQNHPW 257
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 19/199 (9%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTD 158
+G+GSFG V + + +TG A+KKV + + ++ EL L P +V L
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKV-RLEVFRAEELMACAGLTSPRIVPLYGAV----- 154
Query: 159 KDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHR 217
++ ++N+ +E + ++ ++ K + L Y+ Q L Y+H + H
Sbjct: 155 REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLG----QALEGLEYLHSRR-ILHG 209
Query: 218 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY------YRAPELIFGATEY 271
D+K N+L++ LCDFG A L S + Y + APE++ G +
Sbjct: 210 DVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS-C 268
Query: 272 TTAIDIWSVGCVLAELLLG 290
+D+WS C++ +L G
Sbjct: 269 DAKVDVWSSCCMMLHMLNG 287
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 19/199 (9%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTD 158
VG+GSFG V + K +TG A+KKV + + ++ EL L P +V L
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKV-RLEVFRVEELVACAGLSSPRIVPLYGAV----- 135
Query: 159 KDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHR 217
++ ++N+ +E + ++ ++ K + L Y+ Q L Y+H + H
Sbjct: 136 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG----QALEGLEYLHTRR-ILHG 190
Query: 218 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY------YRAPELIFGATEY 271
D+K N+L++ + LCDFG A L S + Y + APE++ G
Sbjct: 191 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-C 249
Query: 272 TTAIDIWSVGCVLAELLLG 290
+DIWS C++ +L G
Sbjct: 250 DAKVDIWSSCCMMLHMLNG 268
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 19/199 (9%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTD 158
VG+GSFG V + K +TG A+KKV + + ++ EL L P +V L
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKV-RLEVFRVEELVACAGLSSPRIVPLYGAV----- 119
Query: 159 KDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHR 217
++ ++N+ +E + ++ ++ K + L Y+ Q L Y+H + H
Sbjct: 120 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG----QALEGLEYLHTRR-ILHG 174
Query: 218 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY------YRAPELIFGATEY 271
D+K N+L++ + LCDFG A L S + Y + APE++ G
Sbjct: 175 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-C 233
Query: 272 TTAIDIWSVGCVLAELLLG 290
+DIWS C++ +L G
Sbjct: 234 DAKVDIWSSCCMMLHMLNG 252
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 189 MPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 248
+ L ++ Y++Q+ + + ++ HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 195 LTLEHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDP 252
Query: 249 PNISYICSRY---YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLV 304
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 253 DYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 304
Query: 305 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 339
+I + +E + P+YT + Q WH
Sbjct: 305 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 339
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 189 MPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 248
+ L ++ Y++Q+ + + ++ HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 197 LTLEHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDP 254
Query: 249 PNISYICSRY---YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLV 304
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 255 DYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 306
Query: 305 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 339
+I + +E + P+YT + Q WH
Sbjct: 307 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 341
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 24/206 (11%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 147
ERV+G G FG V + G+ VAIK + K R E M DHPNVV
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L+ T K + +V+EF+ + + + +I + I + Y
Sbjct: 108 HLEGVV--TRGKPVM---IVIEFMENGA--LDAFLRKHDGQFTVIQLVGMLRGIAAGMRY 160
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 262
+ +G HRD+ +N+LVN + K+ DFG ++V ++ +P Y + + AP
Sbjct: 161 L-ADMGYVHRDLAARNILVNSNL-VCKVSDFGLSRV-IEDDPEAVYTTTGGKIPVRWTAP 217
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELL 288
E I ++T+A D+WS G V+ E++
Sbjct: 218 EAI-QYRKFTSASDVWSYGIVMWEVM 242
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 189 MPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 248
+ L ++ Y++Q+ + + ++ HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 188 LTLEHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDP 245
Query: 249 PNISYICSRY---YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLV 304
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 246 DYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 297
Query: 305 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 339
+I + +E + P+YT + Q WH
Sbjct: 298 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 332
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 112/256 (43%), Gaps = 14/256 (5%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT-----MRLLDHPNVV 147
Y ++G G FG V+ + VAIK V +D+ EL M ++ V
Sbjct: 33 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 92
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YVKLYTYQICRAL 205
S D E + VL + E V + ++R L + + +Q+ A+
Sbjct: 93 SGFSGVIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 150
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
+ H GV HRDIK +N+L++ + ++KL DFGS L+K + +R Y PE I
Sbjct: 151 RHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 208
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIK-CMNP 323
+ + +WS+G +L +++ G P E + V + + + I+ C+
Sbjct: 209 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLAL 268
Query: 324 NYTEF-KFPQIKAHPW 338
++ F +I+ HPW
Sbjct: 269 RPSDRPTFEEIQNHPW 284
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 189 MPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 248
+ L ++ Y++Q+ + + ++ HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 190 LTLEHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDP 247
Query: 249 PNISYICSRY---YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLV 304
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 248 DYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 299
Query: 305 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 339
+I + +E + P+YT + Q WH
Sbjct: 300 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 334
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 112/256 (43%), Gaps = 14/256 (5%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT-----MRLLDHPNVV 147
Y ++G G FG V+ + VAIK V +D+ EL M ++ V
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLI--YVKLYTYQICRAL 205
S D E + VL + E V + ++R L + + +Q+ A+
Sbjct: 66 SGFSGVIRLLDWFERPDSFVL--ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 123
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 265
+ H GV HRDIK +N+L++ + ++KL DFGS L+K + +R Y PE I
Sbjct: 124 RHCHN-XGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 181
Query: 266 FGATEYTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIK-CMNP 323
+ + +WS+G +L +++ G P E + V + + + I+ C+
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLAL 241
Query: 324 NYTEF-KFPQIKAHPW 338
++ F +I+ HPW
Sbjct: 242 RPSDRPTFEEIQNHPW 257
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 19/199 (9%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTD 158
+G+GSFG V + K +TG A+KKV + + ++ EL L P +V L
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKV-RLEVFRVEELVACAGLSSPRIVPLYGAV----- 133
Query: 159 KDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHR 217
++ ++N+ +E + ++ ++ K + L Y+ Q L Y+H + H
Sbjct: 134 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG----QALEGLEYLHTRR-ILHG 188
Query: 218 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY------YRAPELIFGATEY 271
D+K N+L++ + LCDFG A L S + Y + APE++ G
Sbjct: 189 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-C 247
Query: 272 TTAIDIWSVGCVLAELLLG 290
+DIWS C++ +L G
Sbjct: 248 DAKVDIWSSCCMMLHMLNG 266
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 22/202 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-----LQDKRYKNRELQTMRLLDHPNVVSLKHCF 153
+G+GSFG VF+ T + VAIK + + +E+ + D V +
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSY 90
Query: 154 FSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTY--QICRALAYIHGG 211
+ L +++E++ A RA P ++ T +I + L Y+H
Sbjct: 91 LKGSK-----LWIIMEYLGGG---SALDLLRAG---PFDEFQIATMLKEILKGLDYLHSE 139
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE-PNISYICSRYYRAPELIFGATE 270
+ HRDIK N+L++ VKL DFG A L + +++ + ++ APE+I +
Sbjct: 140 KKI-HRDIKAANVLLSEQG-DVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-QQSA 196
Query: 271 YTTAIDIWSVGCVLAELLLGQP 292
Y + DIWS+G EL G+P
Sbjct: 197 YDSKADIWSLGITAIELAKGEP 218
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN---RELQTMRLLDHPNVVSLKHCFFS 155
+G G FG V++ + TVA+K + +D +E M+ + HPN+V L
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL---LGV 75
Query: 156 TTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKL--YTYQICRALAYIHGGIG 213
T + Y ++ EF+ Y Y R R + V L QI A+ Y+
Sbjct: 76 CTREPPFY--IITEFM---TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-N 129
Query: 214 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATE 270
HRD+ +N LV H VK+ DFG ++ L+ G+ ++ +++ + APE + +
Sbjct: 130 FIHRDLAARNCLVG-ENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESL-AYNK 186
Query: 271 YTTAIDIWSVGCVLAEL-LLGQPLFPG 296
++ D+W+ G +L E+ G +PG
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYPG 213
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTD 158
+G+GSFG V + + +TG A+KKV + + ++ EL L P +V L
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKV-RLEVFRAEELMACAGLTSPRIVPLYGAV----- 135
Query: 159 KDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHR 217
++ ++N+ +E + ++ ++ K + L Y+ Q L Y+H + H
Sbjct: 136 REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLG----QALEGLEYLHSRR-ILHG 190
Query: 218 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY------YRAPELIFGATEY 271
D+K N+L++ LCDFG A L + Y + APE++ G +
Sbjct: 191 DVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRS-C 249
Query: 272 TTAIDIWSVGCVLAELLLG 290
+D+WS C++ +L G
Sbjct: 250 DAKVDVWSSCCMMLHMLNG 268
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 5/145 (3%)
Query: 197 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 256
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 162 FFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 219
Query: 257 RYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 315
R Y PE I + + +WS+G +L +++ G P E + V + + + +
Sbjct: 220 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ 279
Query: 316 EEIK-CMNPNYTEF-KFPQIKAHPW 338
I+ C+ ++ F +I+ HPW
Sbjct: 280 HLIRWCLALRPSDRPTFEEIQNHPW 304
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 117/265 (44%), Gaps = 38/265 (14%)
Query: 99 VGQGSFGIVFQAKCL-----ETGETVAIKKVLQDKRY-KNRELQT-----MRLLDHPNVV 147
+G+G+FG V +A T TVA+K + + + ++R L + + + H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP----ETVYRVAK-----HYSRASQRMPLIYVKLYT 198
+L K L +++EF T R + + + L ++ Y+
Sbjct: 95 NL----LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYS 150
Query: 199 YQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY 258
+Q+ + + ++ HRD+ +N+L++ + VK+ DFG A+ + K + +R
Sbjct: 151 FQVAKGMEFL-ASRKXIHRDLAARNILLS-EKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 259 ---YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGTPT 314
+ APE IF YT D+WS G +L E+ LG +PG V+I +
Sbjct: 209 PLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFXRRL 260
Query: 315 REEIKCMNPNYTEFKFPQIKAHPWH 339
+E + P+YT + Q WH
Sbjct: 261 KEGTRMRAPDYTTPEMYQTMLDCWH 285
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK---KVLQDKRYKNRELQ------TMRLLDHPNVV 147
+V+G G+FG V++ + GETV I K+L + ++ M +DHP++V
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPE--TVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
L S T + LV + +P + V +H ++ L + QI + +
Sbjct: 81 RLLGVCLSPT------IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN----WCVQIAKGM 130
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAP 262
Y+ + HRD+ +N+LV H VK+ DFG A++L E + + + A
Sbjct: 131 MYLEER-RLVHRDLAARNVLVKSPNH-VKITDFGLARLLEGDEKEYNADGGKMPIKWMAL 188
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELL 288
E I ++T D+WS G + EL+
Sbjct: 189 ECIH-YRKFTHQSDVWSYGVTIWELM 213
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK---KVLQDKRYKNRELQ------TMRLLDHPNVV 147
+V+G G+FG V++ + GETV I K+L + ++ M +DHP++V
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPE--TVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
L S T + LV + +P + V +H ++ L + QI + +
Sbjct: 104 RLLGVCLSPT------IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN----WCVQIAKGM 153
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAP 262
Y+ + HRD+ +N+LV H VK+ DFG A++L E + + + A
Sbjct: 154 MYLEER-RLVHRDLAARNVLVKSPNH-VKITDFGLARLLEGDEKEYNADGGKMPIKWMAL 211
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELL 288
E I ++T D+WS G + EL+
Sbjct: 212 ECIH-YRKFTHQSDVWSYGVTIWELM 236
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 143 HPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQIC 202
HP++V + + T + +V+E+V + +K Q++P+ Y +I
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSK-----GQKLPVAEAIAYLLEIL 192
Query: 203 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL-----VKGEPNISYICSR 257
AL+Y+H IG+ + D+KP+N+++ Q+KL D G+ + + G P
Sbjct: 193 PALSYLHS-IGLVYNDLKPENIMLT--EEQLKLIDLGAVSRINSFGYLYGTPG------- 242
Query: 258 YYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 312
++APE++ T T A DI++VG LA L L P G VD L E VL T
Sbjct: 243 -FQAPEIV--RTGPTVATDIYTVGRTLAALTLDLPTRNGRY-VDGLPEDDPVLKT 293
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 21/220 (9%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR-------ELQTM 138
QP ++ RV+G+G FG VF + TG+ A KK+ + + K + E + +
Sbjct: 180 QPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKIL 239
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIY---VK 195
+ +VSL + F + TD L LV+ + R H + P
Sbjct: 240 AKVHSRFIVSLAYAFETKTD-----LCLVMTIMNGGDIRY--HIYNVDEDNPGFQEPRAI 292
Query: 196 LYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI-SYI 254
YT QI L ++H + +RD+KP+N+L++ + V++ D G A L G+ Y
Sbjct: 293 FYTAQIVSGLEHLH-QRNIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKGYA 350
Query: 255 CSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
+ + APEL+ G EY ++D +++G L E++ + F
Sbjct: 351 GTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 138/335 (41%), Gaps = 75/335 (22%)
Query: 94 MAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDH-PNV 146
+ + +G+G F +V Q TG+ A K + + +R ++ E+ + L P V
Sbjct: 32 LTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRV 91
Query: 147 VSLKHCFFSTTDKDELYLNLVLEF----------VPETVYRVAKHYSRASQRMPLIYVKL 196
++L + +T++ + L+LE+ +PE V+++ + LI
Sbjct: 92 INLHEVYENTSE-----IILILEYAAGGEIFSLCLPELAEMVSEN-----DVIRLIK--- 138
Query: 197 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPH--THQVKLCDFGSAKVLVKGEPNISYI 254
QI + Y+H + H D+KPQN+L++ +K+ DFG ++ + +
Sbjct: 139 ---QILEGVYYLHQN-NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIM 194
Query: 255 CSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 314
+ Y APE I TTA D+W++G + LL F GE + + I +V
Sbjct: 195 GTPEYLAPE-ILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQV----- 248
Query: 315 REEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIH 374
N +Y+E F + A D + LL +P R TA E C+
Sbjct: 249 -------NVDYSEETFSSVSQL-------------ATDFIQSLLVKNPEKRPTA-EICLS 287
Query: 375 PFFYELRDPNARLPNGRPFPPLFNFKPQELKGASK 409
+ + D F LF+ P+E +S+
Sbjct: 288 HSWLQQWD----------FENLFH--PEETSSSSQ 310
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 21/220 (9%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR-------ELQTM 138
QP ++ RV+G+G FG VF + TG+ A KK+ + + K + E + +
Sbjct: 180 QPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKIL 239
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIY---VK 195
+ +VSL + F + TD L LV+ + R H + P
Sbjct: 240 AKVHSRFIVSLAYAFETKTD-----LCLVMTIMNGGDIRY--HIYNVDEDNPGFQEPRAI 292
Query: 196 LYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI-SYI 254
YT QI L ++H + +RD+KP+N+L++ + V++ D G A L G+ Y
Sbjct: 293 FYTAQIVSGLEHLH-QRNIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKGYA 350
Query: 255 CSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
+ + APEL+ G EY ++D +++G L E++ + F
Sbjct: 351 GTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 21/220 (9%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR-------ELQTM 138
QP ++ RV+G+G FG VF + TG+ A KK+ + + K + E + +
Sbjct: 180 QPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKIL 239
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIY---VK 195
+ +VSL + F + TD L LV+ + R H + P
Sbjct: 240 AKVHSRFIVSLAYAFETKTD-----LCLVMTIMNGGDIRY--HIYNVDEDNPGFQEPRAI 292
Query: 196 LYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI-SYI 254
YT QI L ++H + +RD+KP+N+L++ + V++ D G A L G+ Y
Sbjct: 293 FYTAQIVSGLEHLH-QRNIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKGYA 350
Query: 255 CSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
+ + APEL+ G EY ++D +++G L E++ + F
Sbjct: 351 GTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 103/222 (46%), Gaps = 21/222 (9%)
Query: 84 NGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR-------ELQ 136
QP ++ RV+G+G FG VF + TG+ A KK+ + + K + E +
Sbjct: 178 EAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKK 237
Query: 137 TMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIY--- 193
+ + +VSL + F + TD L LV+ + R H + P
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTD-----LCLVMTIMNGGDIRY--HIYNVDEDNPGFQEPR 290
Query: 194 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI-S 252
YT QI L ++H + +RD+KP+N+L++ + V++ D G A L G+
Sbjct: 291 AIFYTAQIVSGLEHLH-QRNIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKG 348
Query: 253 YICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
Y + + APEL+ G EY ++D +++G L E++ + F
Sbjct: 349 YAGTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 24/206 (11%)
Query: 96 ERVVGQGSFGIVFQAKCLETGET---VAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 147
ERV+G G FG V + G+ VAIK + K R E M DHPN++
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L+ + + +V E++ + + + +I + I + Y
Sbjct: 87 HLEGVVTKSKP-----VMIVTEYMENG--SLDTFLKKNDGQFTVIQLVGMLRGISAGMKY 139
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 262
+ +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + AP
Sbjct: 140 L-SDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTAP 196
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELL 288
E I ++T+A D+WS G V+ E++
Sbjct: 197 EAI-AFRKFTSASDVWSYGIVMWEVV 221
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 28/222 (12%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 151
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 20 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 71
Query: 152 CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMP-LIYVKLYTYQICRALAYIHG 210
F + K +L + V ++ + H S M LI + Q R + Y+H
Sbjct: 72 LFMGYSTKPQLAI--VTQWCEGSSLYHHLHASETKFEMKKLIDI---ARQTARGMDYLHA 126
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIF- 266
+ HRD+K N+ ++ + VK+ DFG A V + + + S + APE+I
Sbjct: 127 K-SIIHRDLKSNNIFLH-EDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 184
Query: 267 -GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 307
+ Y+ D+++ G VL EL+ GQ + + DQ++E++
Sbjct: 185 QDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 226
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 134/348 (38%), Gaps = 46/348 (13%)
Query: 98 VVGQG--SFGIVFQAKCLETGETVAIKKVLQDK------RYKNRELQTMRLLDHPNVVSL 149
V+G+G V A+ TGE V ++++ + + EL +L +HPN+V
Sbjct: 32 VIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPY 91
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
+ F + +EL++ + H+ + + Y+ + +AL YIH
Sbjct: 92 RATFIA---DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYI---LQGVLKALDYIH 145
Query: 210 GGIGVCHRDIKPQNLLVNPH--------THQVKLCDFGSAKVLVKGEPNISYICSRYYRA 261
+G HR +K ++L++ + + G + +V P S +
Sbjct: 146 -HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSP 204
Query: 262 PELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIK-----VLGTPT-- 314
L Y DI+SVG EL G F L+E + +L T T
Sbjct: 205 EVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIP 264
Query: 315 REEIKCMNPN------------YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSP 362
EE+ M+P+ T P P H +H+ P V + LQ +P
Sbjct: 265 AEEL-TMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHP-YHRTFSPHFHHFVEQCLQRNP 322
Query: 363 NLRCTALEACIHPFFYEL-RDPNARLPN-GRPFPPLFNFKPQELKGAS 408
+ R +A H FF ++ R + LP RP P+ NF+ + + S
Sbjct: 323 DARPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFEGSQSQDHS 370
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 134/348 (38%), Gaps = 46/348 (13%)
Query: 98 VVGQG--SFGIVFQAKCLETGETVAIKKVLQDK------RYKNRELQTMRLLDHPNVVSL 149
V+G+G V A+ TGE V ++++ + + EL +L +HPN+V
Sbjct: 16 VIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPY 75
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
+ F + +EL++ + H+ + + Y+ + +AL YIH
Sbjct: 76 RATFIA---DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYI---LQGVLKALDYIH 129
Query: 210 GGIGVCHRDIKPQNLLVNPH--------THQVKLCDFGSAKVLVKGEPNISYICSRYYRA 261
+G HR +K ++L++ + + G + +V P S +
Sbjct: 130 -HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSP 188
Query: 262 PELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIK-----VLGTPT-- 314
L Y DI+SVG EL G F L+E + +L T T
Sbjct: 189 EVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIP 248
Query: 315 REEIKCMNPN------------YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSP 362
EE+ M+P+ T P P H +H+ P V + LQ +P
Sbjct: 249 AEEL-TMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHP-YHRTFSPHFHHFVEQCLQRNP 306
Query: 363 NLRCTALEACIHPFFYEL-RDPNARLPN-GRPFPPLFNFKPQELKGAS 408
+ R +A H FF ++ R + LP RP P+ NF+ + + S
Sbjct: 307 DARPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFEGSQSQDHS 354
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
L ++T + L+++ +P + V +H + Y+ + QI + +
Sbjct: 82 RLLGICLTST------VQLIMQLMPFGXLLDYVREHKDNIGSQ----YLLNWCVQIAKGM 131
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAP 262
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 132 NYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 189
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELL 288
E I YT D+WS G + EL+
Sbjct: 190 ESILHRI-YTHQSDVWSYGVTVWELM 214
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 28/222 (12%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 151
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 32 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 83
Query: 152 CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMP-LIYVKLYTYQICRALAYIHG 210
F + K +L + V ++ + H S M LI + Q R + Y+H
Sbjct: 84 LFMGYSTKPQLAI--VTQWCEGSSLYHHLHASETKFEMKKLIDI---ARQTARGMDYLHA 138
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA--KVLVKGEPNISYIC-SRYYRAPELIF- 266
+ HRD+K N+ ++ + VK+ DFG A K G + S + APE+I
Sbjct: 139 K-SIIHRDLKSNNIFLH-EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 196
Query: 267 -GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 307
+ Y+ D+++ G VL EL+ GQ + + DQ++E++
Sbjct: 197 QDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICRALA 206
L ++T + L+++ +P + Y R + + Y+ + QI + +
Sbjct: 83 RLLGICLTST------VQLIMQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 133
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 263
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 134 YLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
I YT D+WS G + EL+
Sbjct: 192 SILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICRALA 206
L ++T + L+++ +P + Y R + + Y+ + QI + +
Sbjct: 83 RLLGICLTST------VQLIMQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 133
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 263
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 134 YLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
I YT D+WS G + EL+
Sbjct: 192 SILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICRALA 206
L ++T + L+++ +P + Y R + + Y+ + QI + +
Sbjct: 85 RLLGICLTST------VQLIMQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 135
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 263
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 136 YLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 193
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
I YT D+WS G + EL+
Sbjct: 194 SILHRI-YTHQSDVWSYGVTVWELM 217
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK---KVLQDKRYKNR------ELQTMRLLDHPNVV 147
+V+G G FG V + + GE++ I KV++DK + + + LDH ++V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
L ++ L LV +++P + V +H ++ L + QI + +
Sbjct: 97 RLLGLCPGSS------LQLVTQYLPLGSLLDHVRQHRGALGPQLLLN----WGVQIAKGM 146
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAP 262
Y+ G+ HR++ +N+L+ + QV++ DFG A +L + + Y ++ + A
Sbjct: 147 YYLEEH-GMVHRNLAARNVLLKSPS-QVQVADFGVADLLPPDDKQLLYSEAKTPIKWMAL 204
Query: 263 ELI-FGATEYTTAIDIWSVGCVLAELL 288
E I FG +YT D+WS G + EL+
Sbjct: 205 ESIHFG--KYTHQSDVWSYGVTVWELM 229
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 197 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK-------VLVKGEP 249
++YQ+ + +A++ HRD+ +N+L+ H K+CDFG A+ +VKG
Sbjct: 166 FSYQVAKGMAFL-ASKNCIHRDLAARNILLT-HGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 250 NISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIK 308
+ + APE IF YT D+WS G L EL LG +PG + ++IK
Sbjct: 224 RLPV----KWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 278
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 197 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK-------VLVKGEP 249
++YQ+ + +A++ HRD+ +N+L+ H K+CDFG A+ +VKG
Sbjct: 173 FSYQVAKGMAFL-ASKNCIHRDLAARNILLT-HGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 250 NISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIK 308
+ + APE IF YT D+WS G L EL LG +PG + ++IK
Sbjct: 231 RLPV----KWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 285
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 24/206 (11%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 147
++VVG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L+ + + +V E++ + + + +I + I + Y
Sbjct: 110 RLEGVVTKSKP-----VMIVTEYMENG--SLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 262
+ +G HRD+ +N+L+N + K+ DFG A+VL + +P +Y + +P
Sbjct: 163 L-SDMGYVHRDLAARNILINSNL-VCKVSDFGLARVL-EDDPEAAYTTRGGKIPIRWTSP 219
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELL 288
E I ++T+A D+WS G VL E++
Sbjct: 220 EAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 197 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK-------VLVKGEP 249
++YQ+ + +A++ HRD+ +N+L+ H K+CDFG A+ +VKG
Sbjct: 168 FSYQVAKGMAFL-ASKNCIHRDLAARNILLT-HGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 250 NISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIK 308
+ + APE IF YT D+WS G L EL LG +PG + ++IK
Sbjct: 226 RLPV----KWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 280
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICRALA 206
L ++T + L+++ +P + Y R + + Y+ + QI + +
Sbjct: 84 RLLGICLTST------VQLIMQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 134
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 263
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 135 YLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
I YT D+WS G + EL+
Sbjct: 193 SILHRI-YTHQSDVWSYGVTVWELM 216
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 197 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK-------VLVKGEP 249
++YQ+ + +A++ HRD+ +N+L+ H K+CDFG A+ +VKG
Sbjct: 173 FSYQVAKGMAFL-ASKNCIHRDLAARNILLT-HGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 250 NISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIK 308
+ + APE IF YT D+WS G L EL LG +PG + ++IK
Sbjct: 231 RLPV----KWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 285
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICRALA 206
L ++T + L+++ +P + Y R + + Y+ + QI + +
Sbjct: 81 RLLGICLTST------VQLIMQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 131
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 263
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 132 YLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
I YT D+WS G + EL+
Sbjct: 190 SILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 197 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK-------VLVKGEP 249
++YQ+ + +A++ HRD+ +N+L+ H K+CDFG A+ +VKG
Sbjct: 150 FSYQVAKGMAFL-ASKNCIHRDLAARNILLT-HGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 250 NISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIK 308
+ + APE IF YT D+WS G L EL LG +PG + ++IK
Sbjct: 208 RLPV----KWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 262
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 104/246 (42%), Gaps = 47/246 (19%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLETGET-----VAIKKVLQDKRYKNRE-----LQ 136
P++ + + +V+G G+FG V A +T VA+K + + RE L+
Sbjct: 43 PRENLEF--GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK 100
Query: 137 TM-RLLDHPNVVSL-KHCFFSTTDKDELYLNLVLEFV------------------PETVY 176
M +L H N+V+L C S + L+ E+ E Y
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGP------IYLIFEYCCYGDLLNYLRSKREKFSEDEIEY 154
Query: 177 RVAKHYSRASQRMPLIYVKL--YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVK 234
K L + L + YQ+ + + ++ V HRD+ +N+LV H VK
Sbjct: 155 ENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCV-HRDLAARNVLVT-HGKVVK 212
Query: 235 LCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYTTAIDIWSVGCVLAELL-LG 290
+CDFG A+ ++ + +R + APE +F YT D+WS G +L E+ LG
Sbjct: 213 ICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI-YTIKSDVWSYGILLWEIFSLG 271
Query: 291 QPLFPG 296
+PG
Sbjct: 272 VNPYPG 277
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 104/222 (46%), Gaps = 28/222 (12%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 151
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N+ L
Sbjct: 32 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNI--LLF 85
Query: 152 CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMP-LIYVKLYTYQICRALAYIHG 210
+ST + L +V ++ + H S M LI + Q R + Y+H
Sbjct: 86 MGYSTAPQ----LAIVTQWCEGSSLYHHLHASETKFEMKKLIDI---ARQTARGMDYLHA 138
Query: 211 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA--KVLVKGEPNISYIC-SRYYRAPELIF- 266
+ HRD+K N+ ++ + VK+ DFG A K G + S + APE+I
Sbjct: 139 K-SIIHRDLKSNNIFLH-EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 196
Query: 267 -GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 307
+ Y+ D+++ G VL EL+ GQ + + DQ++E++
Sbjct: 197 QDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICRALA 206
L ++T + L+++ +P + Y R + + Y+ + QI + +
Sbjct: 85 RLLGICLTST------VQLIMQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 135
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 263
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 136 YLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 193
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
I YT D+WS G + EL+
Sbjct: 194 SILHRI-YTHQSDVWSYGVTVWELM 217
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICRALA 206
L ++T + L+++ +P + Y R + + Y+ + QI + +
Sbjct: 83 RLLGICLTST------VQLIMQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 133
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 263
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 134 YLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
I YT D+WS G + EL+
Sbjct: 192 SILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICRALA 206
L ++T + L+++ +P + Y R + + Y+ + QI + +
Sbjct: 82 RLLGICLTST------VQLIMQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 132
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 263
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 133 YLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 190
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
I YT D+WS G + EL+
Sbjct: 191 SILHRI-YTHQSDVWSYGVTVWELM 214
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 24/206 (11%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKV---LQDKRYKN--RELQTMRLLDHPNVV 147
E+V+G G FG V + G+ VAIK + DK+ ++ E M DHPN++
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L+ + ++ E++ + + R +I + I + Y
Sbjct: 94 HLEGVVTKCKP-----VMIITEYMENG--SLDAFLRKNDGRFTVIQLVGMLRGIGSGMKY 146
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 262
+ + HRD+ +N+LVN + K+ DFG ++VL + +P +Y + AP
Sbjct: 147 LSD-MSAVHRDLAARNILVNSNL-VCKVSDFGMSRVL-EDDPEAAYTTRGGKIPIRWTAP 203
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELL 288
E I ++T+A D+WS G V+ E++
Sbjct: 204 EAI-AYRKFTSASDVWSYGIVMWEVM 228
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 27/206 (13%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
L ++T + L+ + +P + V +H + Y+ + QI + +
Sbjct: 81 RLLGICLTST------VQLITQLMPFGXLLDYVREHKDNIGSQ----YLLNWCVQIAKGM 130
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAP 262
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 131 NYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELL 288
E I YT D+WS G + EL+
Sbjct: 189 ESILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK---KVLQDKRYKNR------ELQTMRLLDHPNVV 147
+V+G G FG V + + GE++ I KV++DK + + + LDH ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
L ++ L LV +++P + V +H ++ L + QI + +
Sbjct: 79 RLLGLCPGSS------LQLVTQYLPLGSLLDHVRQHRGALGPQLLLN----WGVQIAKGM 128
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAP 262
Y+ G+ HR++ +N+L+ + QV++ DFG A +L + + Y ++ + A
Sbjct: 129 YYLEEH-GMVHRNLAARNVLLKSPS-QVQVADFGVADLLPPDDKQLLYSEAKTPIKWMAL 186
Query: 263 ELI-FGATEYTTAIDIWSVGCVLAELL 288
E I FG +YT D+WS G + EL+
Sbjct: 187 ESIHFG--KYTHQSDVWSYGVTVWELM 211
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 24/206 (11%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 147
++VVG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L+ T K + + +E + + KH + +I + I + Y
Sbjct: 110 RLEGVV--TKSKPVMIVTEXMENGSLDSF-LRKH----DAQFTVIQLVGMLRGIASGMKY 162
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 262
+ +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +P
Sbjct: 163 L-SDMGAVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSP 219
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELL 288
E I ++T+A D+WS G VL E++
Sbjct: 220 EAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 40/222 (18%)
Query: 96 ERVVGQGSFGIVFQAKCLETGETVAIKK-VLQDKRYK----------NRELQTMRLLDHP 144
E+ +G+G FG+V + + ++ VAIK +L D + RE+ M L+HP
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 145 NVVSLKHCFFSTTDKDELYLNLVLEFVP--ETVYRV--AKHYSRASQRMPLIYVKLYTYQ 200
N+V L + +V+EFVP + +R+ H + S ++ L+
Sbjct: 84 NIVKLYGLMHNPP-------RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLM------LD 130
Query: 201 ICRALAYIHG-GIGVCHRDIKPQNLLVNPHTHQVKLC----DFGSAKVLVKGEPNISYIC 255
I + Y+ + HRD++ N+ + +C DFG+++ V ++S +
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVH---SVSGLL 187
Query: 256 SRY-YRAPELIFGATE--YTTAIDIWSVGCVLAELLLGQPLF 294
+ + APE I GA E YT D +S +L +L G+ F
Sbjct: 188 GNFQWMAPETI-GAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 24/206 (11%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 147
++VVG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L+ + + +V E++ + + + +I + I + Y
Sbjct: 110 RLEGVVTKSKP-----VMIVTEYMENG--SLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 262
+ +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +P
Sbjct: 163 L-SDMGFVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSP 219
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELL 288
E I ++T+A D+WS G VL E++
Sbjct: 220 EAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICRALA 206
L ++T + L+ + +P + Y R + + Y+ + QI + +
Sbjct: 81 RLLGICLTST------VQLITQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 131
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 263
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 132 YLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
I YT D+WS G + EL+
Sbjct: 190 SILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICRALA 206
L ++T + L+ + +P + Y R + + Y+ + QI + +
Sbjct: 88 RLLGICLTST------VQLITQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 138
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 263
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 139 YLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
I YT D+WS G + EL+
Sbjct: 197 SILHRI-YTHQSDVWSYGVTVWELM 220
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICRALA 206
L ++T + L+ + +P + Y R + + Y+ + QI + +
Sbjct: 83 RLLGICLTST------VQLITQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 133
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 263
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 134 YLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
I YT D+WS G + EL+
Sbjct: 192 SILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 96 ERVVGQGSFGIVFQAKCLETGET---VAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 147
E+V+G G FG V G+ VAIK + K R E M DHPNV+
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L+ +T + ++ EF+ + + + +I + I + Y
Sbjct: 98 HLEGVVTKSTP-----VMIITEFMENG--SLDSFLRQNDGQFTVIQLVGMLRGIAAGMKY 150
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR------YYRA 261
+ + HRD+ +N+LVN + K+ DFG ++ L + +Y + + A
Sbjct: 151 L-ADMNYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA 208
Query: 262 PELIFGATEYTTAIDIWSVGCVLAELL 288
PE I ++T+A D+WS G V+ E++
Sbjct: 209 PEAI-QYRKFTSASDVWSYGIVMWEVM 234
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 24/206 (11%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 147
++VVG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L+ + + +V E++ + + + +I + I + Y
Sbjct: 110 RLEGVVTKSKP-----VMIVTEYMENG--SLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 262
+ +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +P
Sbjct: 163 L-SDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSP 219
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELL 288
E I ++T+A D+WS G VL E++
Sbjct: 220 EAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 24/206 (11%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKV---LQDKRYKN--RELQTMRLLDHPNVV 147
E+V+G G FG V + G+ VAIK + DK+ ++ E M DHPN++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L+ + ++ E++ + + R +I + I + Y
Sbjct: 79 HLEGVVTKCKP-----VMIITEYMENG--SLDAFLRKNDGRFTVIQLVGMLRGIGSGMKY 131
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 262
+ + HRD+ +N+LVN + K+ DFG ++VL + +P +Y + AP
Sbjct: 132 LSD-MSYVHRDLAARNILVNSNL-VCKVSDFGMSRVL-EDDPEAAYTTRGGKIPIRWTAP 188
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELL 288
E I ++T+A D+WS G V+ E++
Sbjct: 189 EAI-AYRKFTSASDVWSYGIVMWEVM 213
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 24/206 (11%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKV---LQDKRYKN--RELQTMRLLDHPNVV 147
E+V+G G FG V + G+ VAIK + DK+ ++ E M DHPN++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L+ + ++ E++ + + R +I + I + Y
Sbjct: 73 HLEGVVTKCKP-----VMIITEYMENG--SLDAFLRKNDGRFTVIQLVGMLRGIGSGMKY 125
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 262
+ + HRD+ +N+LVN + K+ DFG ++VL + +P +Y + AP
Sbjct: 126 LSD-MSYVHRDLAARNILVNSNL-VCKVSDFGMSRVL-EDDPEAAYTTRGGKIPIRWTAP 182
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELL 288
E I ++T+A D+WS G V+ E++
Sbjct: 183 EAI-AYRKFTSASDVWSYGIVMWEVM 207
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 24/206 (11%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 147
++VVG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L+ + + +V E++ + + + +I + I + Y
Sbjct: 110 RLEGVVTKSKP-----VMIVTEYMENG--SLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 262
+ +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +P
Sbjct: 163 L-SDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSP 219
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELL 288
E I ++T+A D+WS G VL E++
Sbjct: 220 EAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 24/206 (11%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 147
++VVG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L+ + + +V E++ + + + +I + I + Y
Sbjct: 110 RLEGVVTKSKP-----VMIVTEYMENG--SLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 262
+ +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +P
Sbjct: 163 L-SDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSP 219
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELL 288
E I ++T+A D+WS G VL E++
Sbjct: 220 EAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICRALA 206
L ++T + L+ + +P + Y R + + Y+ + QI + +
Sbjct: 106 RLLGICLTST------VQLITQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 156
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 263
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 157 YLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 214
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
I YT D+WS G + EL+
Sbjct: 215 SILHRI-YTHQSDVWSYGVTVWELM 238
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 24/206 (11%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 147
++VVG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 48 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 107
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L+ + + +V E++ + + + +I + I + Y
Sbjct: 108 RLEGVVTKSKP-----VMIVTEYMENG--SLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 160
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 262
+ +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +P
Sbjct: 161 L-SDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSP 217
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELL 288
E I ++T+A D+WS G VL E++
Sbjct: 218 EAI-AYRKFTSASDVWSYGIVLWEVM 242
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 24/206 (11%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 147
++VVG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L+ + + +V E++ + + + +I + I + Y
Sbjct: 110 RLEGVVTKSKP-----VMIVTEYMENG--SLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 262
+ +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +P
Sbjct: 163 L-SDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSP 219
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELL 288
E I ++T+A D+WS G VL E++
Sbjct: 220 EAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 24/206 (11%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 147
++VVG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L+ + + +V E++ + + + +I + I + Y
Sbjct: 110 RLEGVVTKSKP-----VMIVTEYMENG--SLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 262
+ +G HRD+ +N+L+N + K+ DFG +VL + +P +Y + +P
Sbjct: 163 L-SDMGYVHRDLAARNILINSNL-VCKVSDFGLGRVL-EDDPEAAYTTRGGKIPIRWTSP 219
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELL 288
E I ++T+A D+WS G VL E++
Sbjct: 220 EAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 24/206 (11%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 147
++VVG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L+ T K + + +E + + KH + +I + I + Y
Sbjct: 110 RLEGVV--TKSKPVMIVTEXMENGSLDSF-LRKH----DAQFTVIQLVGMLRGIASGMKY 162
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 262
+ +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +P
Sbjct: 163 L-SDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSP 219
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELL 288
E I ++T+A D+WS G VL E++
Sbjct: 220 EAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICRALA 206
L ++T + L+ + +P + Y R + + Y+ + QI + +
Sbjct: 84 RLLGICLTST------VQLITQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 134
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 263
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 135 YLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
I YT D+WS G + EL+
Sbjct: 193 SILHRI-YTHQSDVWSYGVTVWELM 216
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICRALA 206
L ++T + L+ + +P + Y R + + Y+ + QI + +
Sbjct: 88 RLLGICLTST------VQLITQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 138
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 263
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 139 YLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
I YT D+WS G + EL+
Sbjct: 197 SILHRI-YTHQSDVWSYGVTVWELM 220
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICRALA 206
L ++T + L+ + +P + Y R + + Y+ + QI + +
Sbjct: 81 RLLGICLTST------VQLITQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 131
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 263
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 132 YLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
I YT D+WS G + EL+
Sbjct: 190 SILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICRALA 206
L ++T + L+ + +P + Y R + + Y+ + QI + +
Sbjct: 84 RLLGICLTST------VQLITQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 134
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 263
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 135 YLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
I YT D+WS G + EL+
Sbjct: 193 SILHRI-YTHQSDVWSYGVTVWELM 216
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICRALA 206
L ++T + L+ + +P + Y R + + Y+ + QI + +
Sbjct: 84 RLLGICLTST------VQLITQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 134
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 263
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 135 YLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
I YT D+WS G + EL+
Sbjct: 193 SILHRI-YTHQSDVWSYGVTVWELM 216
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICRALA 206
L ++T + L+ + +P + Y R + + Y+ + QI + +
Sbjct: 91 RLLGICLTST------VQLITQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 141
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 263
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 142 YLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 199
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
I YT D+WS G + EL+
Sbjct: 200 SILHRI-YTHQSDVWSYGVTVWELM 223
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICRALA 206
L ++T + L+ + +P + Y R + + Y+ + QI + +
Sbjct: 83 RLLGICLTST------VQLITQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 133
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 263
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 134 YLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
I YT D+WS G + EL+
Sbjct: 192 SILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICRALA 206
L ++T + L+ + +P + Y R + + Y+ + QI + +
Sbjct: 87 RLLGICLTST------VQLITQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 137
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 263
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 138 YLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 195
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
I YT D+WS G + EL+
Sbjct: 196 SILHRI-YTHQSDVWSYGVTVWELM 219
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 25/205 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVS-------- 148
+V+G G+FG V++ + GE V I ++ R +LD V++
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 149 --LKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALA 206
L C ST + LV + +P + H R+ + + QI + ++
Sbjct: 83 RLLGICLTST-------VQLVTQLMPYGC--LLDHVRENRGRLGSQDLLNWCMQIAKGMS 133
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 263
Y+ + + HRD+ +N+LV H VK+ DFG A++L E + + A E
Sbjct: 134 YLE-DVRLVHRDLAARNVLVKSPNH-VKITDFGLARLLDIDETEYHADGGKVPIKWMALE 191
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
I +T D+WS G + EL+
Sbjct: 192 SIL-RRRFTHQSDVWSYGVTVWELM 215
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 115/293 (39%), Gaps = 58/293 (19%)
Query: 94 MAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT-MRLLDHPNVVSLKHC 152
+ +V+G G G V Q T E A+K +LQD RE++ R P++V +
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 79
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICR----ALAYI 208
+ + LY + + +SR R + + +I + A+ Y+
Sbjct: 80 Y------ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 133
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 266
H I + HRD+KP+NLL +KL DFG AK GE
Sbjct: 134 HS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTGE------------------ 173
Query: 267 GATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 326
+Y + D+WS+G ++ LL G P F G + G TR +
Sbjct: 174 ---KYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM-------G 217
Query: 327 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFYE 379
+++FP + W ++ E L+ LL+ P R T E HP+ +
Sbjct: 218 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 262
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 24/206 (11%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 147
++VVG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 38 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 97
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L+ + + +V E++ + + + +I + I + Y
Sbjct: 98 RLEGVVTKSKP-----VMIVTEYMENG--SLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 150
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 262
+ +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +P
Sbjct: 151 LSD-MGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSP 207
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELL 288
E I ++T+A D+WS G VL E++
Sbjct: 208 EAI-AYRKFTSASDVWSYGIVLWEVM 232
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 34/211 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVL--------QDKRYKNRELQTMRLLDHPNVVSLK 150
+G+G FG+V++ T TVA+KK+ + K+ ++E++ M H N+V L
Sbjct: 39 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL- 95
Query: 151 HCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
FS+ D L LV ++P + S PL + + C+
Sbjct: 96 -LGFSSDGDD---LCLVYVYMPNG--SLLDRLSCLDGTPPLSW-----HMRCKIAQGAAN 144
Query: 211 GIGV------CHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI---SYICSRYYRA 261
GI HRDIK N+L++ K+ DFG A+ K + + + Y A
Sbjct: 145 GINFLHENHHIHRDIKSANILLD-EAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMA 203
Query: 262 PELIFGATEYTTAIDIWSVGCVLAELLLGQP 292
PE + G E T DI+S G VL E++ G P
Sbjct: 204 PEALRG--EITPKSDIYSFGVVLLEIITGLP 232
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 34/211 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVL--------QDKRYKNRELQTMRLLDHPNVVSLK 150
+G+G FG+V++ T TVA+KK+ + K+ ++E++ M H N+V L
Sbjct: 39 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL- 95
Query: 151 HCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
FS+ D L LV ++P + S PL + + C+
Sbjct: 96 -LGFSSDGDD---LCLVYVYMPNG--SLLDRLSCLDGTPPLSW-----HMRCKIAQGAAN 144
Query: 211 GIGV------CHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI---SYICSRYYRA 261
GI HRDIK N+L++ K+ DFG A+ K + + + Y A
Sbjct: 145 GINFLHENHHIHRDIKSANILLD-EAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMA 203
Query: 262 PELIFGATEYTTAIDIWSVGCVLAELLLGQP 292
PE + G E T DI+S G VL E++ G P
Sbjct: 204 PEALRG--EITPKSDIYSFGVVLLEIITGLP 232
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 24/206 (11%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 147
++VVG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L+ + + +V E++ + + + +I + I + Y
Sbjct: 81 RLEGVVTKSKP-----VMIVTEYMENG--SLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 133
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 262
+ +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +P
Sbjct: 134 LSD-MGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSP 190
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELL 288
E I ++T+A D+WS G VL E++
Sbjct: 191 EAI-AYRKFTSASDVWSYGIVLWEVM 215
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 24/206 (11%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 147
++VVG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L+ T K + + +E + + KH + +I + I + Y
Sbjct: 81 RLEGVV--TKSKPVMIVTEXMENGSLDSF-LRKH----DAQFTVIQLVGMLRGIASGMKY 133
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 262
+ +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +P
Sbjct: 134 LSD-MGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSP 190
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELL 288
E I ++T+A D+WS G VL E++
Sbjct: 191 EAI-AYRKFTSASDVWSYGIVLWEVM 215
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICRALA 206
L ++T + L+ + +P + Y R + + Y+ + QI + +
Sbjct: 81 RLLGICLTST------VQLITQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 131
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 263
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 132 YLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
I YT D+WS G + EL+
Sbjct: 190 SILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 102/215 (47%), Gaps = 22/215 (10%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQ------TMRLLDHPN 145
++ + ++G+G FG V++ + L G VA+K+ L+++R + ELQ + + H N
Sbjct: 39 NFSNKNILGRGGFGKVYKGR-LADGTLVAVKR-LKEERXQGGELQFQTEVEMISMAVHRN 96
Query: 146 VVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQI--CR 203
++ L+ + T++ +Y + V + R + PL + K + R
Sbjct: 97 LLRLRGFCMTPTERLLVYPYMANGSVASCLR------ERPESQPPLDWPKRQRIALGSAR 150
Query: 204 ALAYIHGGIG--VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY--Y 259
LAY+H + HRD+K N+L++ V + DFG AK++ + ++ +
Sbjct: 151 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGTIGH 209
Query: 260 RAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
APE + + + D++ G +L EL+ GQ F
Sbjct: 210 IAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 243
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICRALA 206
L ++T + L+ + +P + Y R + + Y+ + QI + +
Sbjct: 75 RLLGICLTST------VQLITQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 125
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 263
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 126 YLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 183
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
I YT D+WS G + EL+
Sbjct: 184 SILHRI-YTHQSDVWSYGVTVWELM 207
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 102/215 (47%), Gaps = 22/215 (10%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQ------TMRLLDHPN 145
++ + ++G+G FG V++ + L G VA+K+ L+++R + ELQ + + H N
Sbjct: 31 NFXNKNILGRGGFGKVYKGR-LADGXLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRN 88
Query: 146 VVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQI--CR 203
++ L+ + T++ +Y + V + R + PL + K + R
Sbjct: 89 LLRLRGFCMTPTERLLVYPYMANGSVASCLR------ERPESQPPLDWPKRQRIALGSAR 142
Query: 204 ALAYIHGGIG--VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY--Y 259
LAY+H + HRD+K N+L++ V + DFG AK++ + ++ +
Sbjct: 143 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGXIGH 201
Query: 260 RAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLF 294
APE + + + D++ G +L EL+ GQ F
Sbjct: 202 IAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 235
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 100/229 (43%), Gaps = 40/229 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKV----------LQDKRYKNRELQTMRLL-DHPN 145
+ +G G+FG V +A G+ A+ KV +K EL+ M L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 146 VVSL--------------KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPL 191
+V+L ++C + + VLE P + +A S AS R L
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDP--AFAIAN--STASTRDLL 167
Query: 192 IYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 251
++ Q+ + +A++ HRD+ +N+L+ + H K+ DFG A+ ++ I
Sbjct: 168 ----HFSSQVAQGMAFL-ASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYI 221
Query: 252 SYICSRY---YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPG 296
+R + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 222 VKGNARLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 40/222 (18%)
Query: 96 ERVVGQGSFGIVFQAKCLETGETVAIKK-VLQDKRYK----------NRELQTMRLLDHP 144
E+ +G+G FG+V + + ++ VAIK +L D + RE+ M L+HP
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 145 NVVSLKHCFFSTTDKDELYLNLVLEFVP--ETVYRV--AKHYSRASQRMPLIYVKLYTYQ 200
N+V L + +V+EFVP + +R+ H + S ++ L+
Sbjct: 84 NIVKLYGLMHNPP-------RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLM------LD 130
Query: 201 ICRALAYIHG-GIGVCHRDIKPQNLLVNPHTHQVKLC----DFGSAKVLVKGEPNISYIC 255
I + Y+ + HRD++ N+ + +C DFG ++ V ++S +
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH---SVSGLL 187
Query: 256 SRY-YRAPELIFGATE--YTTAIDIWSVGCVLAELLLGQPLF 294
+ + APE I GA E YT D +S +L +L G+ F
Sbjct: 188 GNFQWMAPETI-GAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 25/205 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+G G+FG V++ + GE V I + + R N+E+ M +D+P+V
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICRALA 206
L ++T + L+ + +P + Y R + + Y+ + QI + +
Sbjct: 115 RLLGICLTST------VQLITQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 165
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 263
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 166 YLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 223
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
I YT D+WS G + EL+
Sbjct: 224 SILHRI-YTHQSDVWSYGVTVWELM 247
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 34/211 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVL--------QDKRYKNRELQTMRLLDHPNVVSLK 150
+G+G FG+V++ T TVA+KK+ + K+ ++E++ M H N+V L
Sbjct: 33 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL- 89
Query: 151 HCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
FS+ D L LV ++P + S PL + + C+
Sbjct: 90 -LGFSSDGDD---LCLVYVYMPNG--SLLDRLSCLDGTPPLSW-----HMRCKIAQGAAN 138
Query: 211 GIGV------CHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI---SYICSRYYRA 261
GI HRDIK N+L++ K+ DFG A+ K + + + Y A
Sbjct: 139 GINFLHENHHIHRDIKSANILLD-EAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMA 197
Query: 262 PELIFGATEYTTAIDIWSVGCVLAELLLGQP 292
PE + G E T DI+S G VL E++ G P
Sbjct: 198 PEALRG--EITPKSDIYSFGVVLLEIITGLP 226
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 19/196 (9%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-LQDKRYKNRELQ-------TMRLLDHPNVVSLK 150
+G+GSF V+ K L+T TV + LQD++ E Q ++ L HPN+V
Sbjct: 34 IGRGSFKTVY--KGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFY 91
Query: 151 HCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
+ ST K + + LV E K Y + + + ++ + QI + L ++H
Sbjct: 92 DSWESTV-KGKKCIVLVTELXTSGTL---KTYLKRFKVXKIKVLRSWCRQILKGLQFLHT 147
Query: 211 GIG-VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGAT 269
+ HRD+K N+ + T VK+ D G A L + + I + + APE
Sbjct: 148 RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA-TLKRASFAKAVIGTPEFXAPEXY--EE 204
Query: 270 EYTTAIDIWSVG-CVL 284
+Y ++D+++ G C L
Sbjct: 205 KYDESVDVYAFGXCXL 220
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+ G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICRALA 206
L ++T + L+++ +P + Y R + + Y+ + QI + +
Sbjct: 88 RLLGICLTST------VQLIMQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 138
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 263
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 139 YLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
I YT D+WS G + EL+
Sbjct: 197 SILHRI-YTHQSDVWSYGVTVWELM 220
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 25/205 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICRALA 206
L ++T + L+ + +P + Y R + + Y+ + QI +
Sbjct: 78 RLLGICLTST------VQLITQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAEGMN 128
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 263
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 129 YLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 186
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
I YT D+WS G + EL+
Sbjct: 187 SILHRI-YTHQSDVWSYGVTVWELM 210
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 103/264 (39%), Gaps = 81/264 (30%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNREL---------QTMRLLDHPNVVSL 149
+G+G FG+VF+AK AIK++ R NREL + + L+HP +V
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNYAIKRI----RLPNRELAREKVMREVKALAKLEHPGIVRY 69
Query: 150 KHCFFST------TDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYV--------- 194
+ + T + DE++L P + S +RM
Sbjct: 70 FNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQP 129
Query: 195 ---KLYTY---QICR-------------------------------ALAYIHGGIGVCHR 217
K+Y Y Q+CR A+ ++H G+ HR
Sbjct: 130 SSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK-GLMHR 188
Query: 218 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE-------PNISY------ICSRYYRAPEL 264
D+KP N+ VK+ DFG + + E P +Y + ++ Y +PE
Sbjct: 189 DLKPSNIFFT-MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQ 247
Query: 265 IFGATEYTTAIDIWSVGCVLAELL 288
I G Y+ +DI+S+G +L ELL
Sbjct: 248 IHG-NNYSHKVDIFSLGLILFELL 270
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 97/197 (49%), Gaps = 20/197 (10%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN---RELQTMRLLDHPNVVSLKHCFFS 155
+G G FG+V K + VA+K + + ++ +E QTM L HP +V F+
Sbjct: 16 LGSGQFGVVKLGK-WKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVK----FYG 70
Query: 156 TTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGV 214
K E + +V E++ + + + + + L+ + Y +C +A++ +
Sbjct: 71 VCSK-EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEM---CYDVCEGMAFLESHQFI 126
Query: 215 CHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEY 271
HRD+ +N LV+ VK+ DFG + ++ + +S + +++ + APE +F +Y
Sbjct: 127 -HRDLAARNCLVDRDL-CVKVSDFGMTRYVLD-DQYVSSVGTKFPVKWSAPE-VFHYFKY 182
Query: 272 TTAIDIWSVGCVLAELL 288
++ D+W+ G ++ E+
Sbjct: 183 SSKSDVWAFGILMWEVF 199
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 99/244 (40%), Gaps = 60/244 (24%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKC-----LETGETVAIKKVLQDKRYK-----NRELQ 136
P+ I Y+ R +G+G+FG VFQA+ E VA+K + ++ RE
Sbjct: 45 PRNNIEYV--RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 137 TMRLLDHPNVVSL--------KHC----FFSTTDKDELYLNLVLEFVPETVYRVAKHYSR 184
M D+PN+V L C + + D +E ++ P TV ++
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMS----PHTVCSLSHSDLS 158
Query: 185 ASQRM------PLIYVK--LYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLC 236
R+ PL + Q+ +AY+ V HRD+ +N LV VK+
Sbjct: 159 TRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFV-HRDLATRNCLVG-ENMVVKIA 216
Query: 237 DFGSAKVLVKGEPNISYICSRYYRA------------PELIFGATEYTTAIDIWSVGCVL 284
DFG ++ + + YY+A PE IF YTT D+W+ G VL
Sbjct: 217 DFGLSRNIYSAD---------YYKADGNDAIPIRWMPPESIF-YNRYTTESDVWAYGVVL 266
Query: 285 AELL 288
E+
Sbjct: 267 WEIF 270
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 25/213 (11%)
Query: 91 ISYMA-ERVVGQGSFGIVFQAKCLETGET---VAIKKVLQDKRYKNR-----ELQTMRLL 141
+SY+ E V+G G FG V + + G+ VAIK + + R E M
Sbjct: 13 VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF 72
Query: 142 DHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQI 201
+HPN++ L+ + + + ++ EF+ + + +I + I
Sbjct: 73 EHPNIIRLEGVV-----TNSMPVMILTEFMENGA--LDSFLRLNDGQFTVIQLVGMLRGI 125
Query: 202 CRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR---- 257
+ Y+ + HRD+ +N+LVN + K+ DFG ++ L + + +Y S
Sbjct: 126 ASGMRYL-AEMSYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEENSSDPTYTSSLGGKI 183
Query: 258 --YYRAPELIFGATEYTTAIDIWSVGCVLAELL 288
+ APE I ++T+A D WS G V+ E++
Sbjct: 184 PIRWTAPEAI-AFRKFTSASDAWSYGIVMWEVM 215
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 25/205 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+ G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICRALA 206
L ++T + L+ + +P + Y R + + Y+ + QI + +
Sbjct: 81 RLLGICLTST------VQLITQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 131
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 263
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 132 YLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
I YT D+WS G + EL+
Sbjct: 190 SILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 25/205 (12%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 147
+V+ G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ-RMPLIYVKLYTYQICRALA 206
L ++T + L+ + +P + Y R + + Y+ + QI + +
Sbjct: 88 RLLGICLTST------VQLITQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 138
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 263
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 139 YLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 264 LIFGATEYTTAIDIWSVGCVLAELL 288
I YT D+WS G + EL+
Sbjct: 197 SILHRI-YTHQSDVWSYGVTVWELM 220
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 100/224 (44%), Gaps = 22/224 (9%)
Query: 94 MAERVVGQGSFGIVFQAKCLETGETVAIKKVL-----QDKRYKNRELQTMRLLDHPNVVS 148
M +G GSFG V++ K V I KV+ Q + ++N E+ +R H N++
Sbjct: 39 MLSTRIGSGSFGTVYKGKW-HGDVAVKILKVVDPTPEQFQAFRN-EVAVLRKTRHVNIL- 95
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
F KD L +V ++ + + KH + + + Q + + Y+
Sbjct: 96 ---LFMGYMTKDNL--AIVTQWCEGS--SLYKHLHVQETKFQMFQLIDIARQTAQGMDYL 148
Query: 209 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVK--GEPNISY-ICSRYYRAPELI 265
H + HRD+K N+ ++ VK+ DFG A V + G + S + APE+I
Sbjct: 149 HAK-NIIHRDMKSNNIFLHEGL-TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVI 206
Query: 266 FGATE--YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 307
++ D++S G VL EL+ G+ + + DQ++ ++
Sbjct: 207 RMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMV 250
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 104/238 (43%), Gaps = 49/238 (20%)
Query: 97 RVVGQGSFGIVFQAKCL----ETGETVAIKKVLQDK------RYKNRELQTMRLLDHPNV 146
+ +G+G FG V +A G T K+L++ R E ++ ++HP+V
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKL---------- 196
+ L + +D L L++E+ Y + + R S+++ Y+
Sbjct: 89 IKL----YGACSQDGPLL-LIVEYAK---YGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 197 --------------YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK 242
+ +QI + + Y+ + + HRD+ +N+LV ++K+ DFG ++
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYL-AEMSLVHRDLAARNILV-AEGRKMKISDFGLSR 198
Query: 243 VLVKGEPNISYICSRY---YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPG 296
+ + + + R + A E +F YTT D+WS G +L E++ LG +PG
Sbjct: 199 DVYEEDSXVKRSQGRIPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 98/229 (42%), Gaps = 40/229 (17%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVL----------QDKRYKNRELQTMRLL-DHPN 145
+ +G G+FG V +A G+ A+ KV +K EL+ M L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 146 VVSL--------------KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPL 191
+V+L ++C + + VLE P ++ A+ +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPA--------FAIANSTLST 163
Query: 192 IYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI 251
+ ++ Q+ + +A++ HRD+ +N+L+ + H K+ DFG A+ ++ I
Sbjct: 164 RDLLHFSSQVAQGMAFL-ASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYI 221
Query: 252 SYICSRY---YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPG 296
+R + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 222 VKGNARLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 40/222 (18%)
Query: 96 ERVVGQGSFGIVFQAKCLETGETVAIKK-VLQDKRYK----------NRELQTMRLLDHP 144
E+ +G+G FG+V + + ++ VAIK +L D + RE+ M L+HP
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 145 NVVSLKHCFFSTTDKDELYLNLVLEFVP--ETVYRV--AKHYSRASQRMPLIYVKLYTYQ 200
N+V L + +V+EFVP + +R+ H + S ++ L+
Sbjct: 84 NIVKLYGLMHNPP-------RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLM------LD 130
Query: 201 ICRALAYIHG-GIGVCHRDIKPQNLLVNPHTHQVKLC----DFGSAKVLVKGEPNISYIC 255
I + Y+ + HRD++ N+ + +C DF ++ V ++S +
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVH---SVSGLL 187
Query: 256 SRY-YRAPELIFGATE--YTTAIDIWSVGCVLAELLLGQPLF 294
+ + APE I GA E YT D +S +L +L G+ F
Sbjct: 188 GNFQWMAPETI-GAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 125/292 (42%), Gaps = 42/292 (14%)
Query: 96 ERVVGQGSFGIVFQAKCLETGET---VAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 147
E+++G G G V + G+ VAIK + + R E M DHPN++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP----ETVYRVAKHYSRASQRMPLIYVKLYTYQICR 203
L+ + L + +V E++ +T R Q + ++ +
Sbjct: 114 RLE----GVVTRGRLAM-IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR------GVGA 162
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----Y 258
+ Y+ +G HRD+ +N+LV+ + K+ DFG ++VL + +P+ +Y +
Sbjct: 163 GMRYL-SDLGYVHRDLAARNVLVDSNL-VCKVSDFGLSRVL-EDDPDAAYTTTGGKIPIR 219
Query: 259 YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGTPTREE 317
+ APE I T +++A D+WS G V+ E+L G+ + + D + + E
Sbjct: 220 WTAPEAIAFRT-FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV--------EEG 270
Query: 318 IKCMNPNYTEFKFPQIKAHPWHKIFHKR-MPPEAVDLVSRLLQYSPNLRCTA 368
+ P Q+ WHK +R + V ++ L++ +LR TA
Sbjct: 271 YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESLRATA 322
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 103/221 (46%), Gaps = 26/221 (11%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 151
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 43 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 94
Query: 152 CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGG 211
F + K +L +V ++ + + H + +I + Q + + Y+H
Sbjct: 95 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 150
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGA 268
+ HRD+K N+ ++ VK+ DFG A V + + + S + APE+I
Sbjct: 151 -SIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 208
Query: 269 TE--YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 307
+ Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 209 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 249
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 103/221 (46%), Gaps = 26/221 (11%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 151
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 44 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 95
Query: 152 CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGG 211
F + K +L +V ++ + + H + +I + Q + + Y+H
Sbjct: 96 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 151
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGA 268
+ HRD+K N+ ++ VK+ DFG A V + + + S + APE+I
Sbjct: 152 -SIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 269 TE--YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 307
+ Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 104/238 (43%), Gaps = 49/238 (20%)
Query: 97 RVVGQGSFGIVFQAKCL----ETGETVAIKKVLQDK------RYKNRELQTMRLLDHPNV 146
+ +G+G FG V +A G T K+L++ R E ++ ++HP+V
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKL---------- 196
+ L + +D L L++E+ Y + + R S+++ Y+
Sbjct: 89 IKL----YGACSQDGPLL-LIVEYAK---YGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 197 --------------YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK 242
+ +QI + + Y+ + + HRD+ +N+LV ++K+ DFG ++
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYL-AEMKLVHRDLAARNILV-AEGRKMKISDFGLSR 198
Query: 243 VLVKGEPNISYICSRY---YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPG 296
+ + + + R + A E +F YTT D+WS G +L E++ LG +PG
Sbjct: 199 DVYEEDSXVKRSQGRIPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 103/221 (46%), Gaps = 26/221 (11%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 151
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 18 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 69
Query: 152 CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGG 211
F + K +L +V ++ + + H + +I + Q + + Y+H
Sbjct: 70 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 125
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGA 268
+ HRD+K N+ ++ VK+ DFG A V + + + S + APE+I
Sbjct: 126 -SIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 183
Query: 269 TE--YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 307
+ Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 184 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 224
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 103/221 (46%), Gaps = 26/221 (11%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 151
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 21 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 72
Query: 152 CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGG 211
F + K +L +V ++ + + H + +I + Q + + Y+H
Sbjct: 73 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 128
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGA 268
+ HRD+K N+ ++ VK+ DFG A V + + + S + APE+I
Sbjct: 129 -SIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 269 TE--YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 307
+ Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 103/221 (46%), Gaps = 26/221 (11%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 151
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 16 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 67
Query: 152 CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGG 211
F + K +L +V ++ + + H + +I + Q + + Y+H
Sbjct: 68 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 123
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGA 268
+ HRD+K N+ ++ VK+ DFG A V + + + S + APE+I
Sbjct: 124 -SIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 269 TE--YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 307
+ Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 103/221 (46%), Gaps = 26/221 (11%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 151
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 21 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 72
Query: 152 CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGG 211
F + K +L +V ++ + + H + +I + Q + + Y+H
Sbjct: 73 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 128
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGA 268
+ HRD+K N+ ++ VK+ DFG A V + + + S + APE+I
Sbjct: 129 -SIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 269 TE--YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 307
+ Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 98/232 (42%), Gaps = 44/232 (18%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVL----------QDKRYKNRELQTMRLL-DHPN 145
+ +G G+FG V +A G+ A+ KV +K EL+ M L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 146 VVSL--------------KHCFFSTTDKDELYLNLVLEFVP---ETVYRVAKHYSRASQR 188
+V+L ++C + LN + P E Y + +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDL------LNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 189 MPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 248
L++ ++ Q+ + +A++ HRD+ +N+L+ + H K+ DFG A+ ++
Sbjct: 166 RDLLH---FSSQVAQGMAFL-ASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDS 220
Query: 249 PNISYICSRY---YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPG 296
I +R + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 221 NYIVKGNARLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 271
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 24/207 (11%)
Query: 96 ERVVGQGSFGIVFQAKCLETGET---VAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 147
E+V+G G FG V G+ VAIK + K R E M DHPNV+
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAY 207
L+ +T + ++ EF+ + + + +I + I + Y
Sbjct: 72 HLEGVVTKSTP-----VMIITEFMENG--SLDSFLRQNDGQFTVIQLVGMLRGIAAGMKY 124
Query: 208 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR------YYRA 261
+ + HR + +N+LVN + K+ DFG ++ L + +Y + + A
Sbjct: 125 L-ADMNYVHRALAARNILVNSNL-VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA 182
Query: 262 PELIFGATEYTTAIDIWSVGCVLAELL 288
PE I ++T+A D+WS G V+ E++
Sbjct: 183 PEAI-QYRKFTSASDVWSYGIVMWEVM 208
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 99 VGQGSFGIVFQAKC-LETGETVAIK------KVLQDKRYKN---RELQTMRLLDHPNVVS 148
+G GSFG+V + + +G+TV++ VL + RE+ M LDH N++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 149 LKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALA 206
L + + +V E P + R+ KH L + Y Q+ +
Sbjct: 86 LYGVVLTPP------MKMVTELAPLGSLLDRLRKHQG----HFLLGTLSRYAVQVAEGMG 135
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR------ 260
Y+ + HRD+ +NLL+ VK+ DFG + L + + + Y+ + +
Sbjct: 136 YLESKRFI-HRDLAARNLLLATRD-LVKIGDFGLMRALPQNDDH--YVMQEHRKVPFAWC 191
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIK 308
APE + T ++ A D W G L E+ GQ + G +G L +I K
Sbjct: 192 APESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 239
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 46/230 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVL----------QDKRYKNRELQTMRLL-DHPN 145
+ +G G+FG V +A G+ A+ KV +K EL+ M L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 146 VVSL--------------KHCFFSTTDKDELYLNLVLEFVPETV-YRVAKHYSRASQRMP 190
+V+L ++C + +L F+ + K R +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGD----------LLNFLRRKAEADLDKEDGRPLELRD 161
Query: 191 LIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN 250
L++ ++ Q+ + +A++ HRD+ +N+L+ + H K+ DFG A+ ++
Sbjct: 162 LLH---FSSQVAQGMAFL-ASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNY 216
Query: 251 ISYICSRY---YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPG 296
I +R + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 217 IVKGNARLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 265
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 104/238 (43%), Gaps = 49/238 (20%)
Query: 97 RVVGQGSFGIVFQAKCL----ETGETVAIKKVLQDK------RYKNRELQTMRLLDHPNV 146
+ +G+G FG V +A G T K+L++ R E ++ ++HP+V
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKL---------- 196
+ L + +D L L++E+ Y + + R S+++ Y+
Sbjct: 89 IKL----YGACSQDGPLL-LIVEYAK---YGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 197 --------------YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK 242
+ +QI + + Y+ + + HRD+ +N+LV ++K+ DFG ++
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYL-AEMKLVHRDLAARNILV-AEGRKMKISDFGLSR 198
Query: 243 VLVKGEPNISYICSRY---YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPG 296
+ + + + R + A E +F YTT D+WS G +L E++ LG +PG
Sbjct: 199 DVYEEDSYVKRSQGRIPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 26/220 (11%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVL----------QDKRYKNRELQTMRLL-DHPN 145
+ +G G+FG V +A G+ A+ KV +K EL+ M L H N
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 103
Query: 146 VVSL-KHCFFS----TTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQ 200
+V+L C + Y +L+ + + K R + L++ ++ Q
Sbjct: 104 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLH---FSSQ 160
Query: 201 ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-- 258
+ + +A++ HRD+ +N+L+ + H K+ DFG A+ ++ I +R
Sbjct: 161 VAQGMAFL-ASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 218
Query: 259 -YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPG 296
+ APE IF YT D+WS G +L E+ LG +PG
Sbjct: 219 KWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 257
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 35/217 (16%)
Query: 96 ERVVGQGSFGIVFQAKCLETG--ETVAIKKVLQ-----DKRYKNRELQTM-RLLDHPNVV 147
+ V+G+G+FG V +A+ + G AIK++ + D R EL+ + +L HPN++
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 148 SL-KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALA 206
+L C + YL L +E+ P SR + P + T +
Sbjct: 90 NLLGAC------EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 143
Query: 207 YIHGGIGVC------------HRDIKPQNLLVNPHTHQVKLCDFGSAK---VLVKGEPNI 251
+H V HRD+ +N+LV + + K+ DFG ++ V VK +
Sbjct: 144 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN-YVAKIADFGLSRGQEVYVK--KTM 200
Query: 252 SYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELL 288
+ R+ L + YTT D+WS G +L E++
Sbjct: 201 GRLPVRWMAIESLNYSV--YTTNSDVWSYGVLLWEIV 235
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 99 VGQGSFGIVFQAKC-LETGETVAIK------KVLQDKRYKN---RELQTMRLLDHPNVVS 148
+G GSFG+V + + +G+TV++ VL + RE+ M LDH N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 149 LKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALA 206
L + + +V E P + R+ KH L + Y Q+ +
Sbjct: 80 LYGVVLTPP------MKMVTELAPLGSLLDRLRKHQG----HFLLGTLSRYAVQVAEGMG 129
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR------ 260
Y+ + HRD+ +NLL+ VK+ DFG + L + + + Y+ + +
Sbjct: 130 YLESKRFI-HRDLAARNLLLATRD-LVKIGDFGLMRALPQNDDH--YVMQEHRKVPFAWC 185
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIK 308
APE + T ++ A D W G L E+ GQ + G +G L +I K
Sbjct: 186 APESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 100 GQGSFGIVFQAKCLETGETVAIKKVL--------QDKRYKNRELQTMRLLDHPNVVSLKH 151
G+G FG+V++ T TVA+KK+ + K+ ++E++ H N+V L
Sbjct: 31 GEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVEL-- 86
Query: 152 CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGG 211
FS+ D L LV + P + S PL + + C+ G
Sbjct: 87 LGFSSDGDD---LCLVYVYXPNG--SLLDRLSCLDGTPPLSW-----HXRCKIAQGAANG 136
Query: 212 IGV------CHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAP 262
I HRDIK N+L++ K+ DFG A+ K + + + Y AP
Sbjct: 137 INFLHENHHIHRDIKSANILLD-EAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAP 195
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLLGQP 292
E + G E T DI+S G VL E++ G P
Sbjct: 196 EALRG--EITPKSDIYSFGVVLLEIITGLP 223
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 35/217 (16%)
Query: 96 ERVVGQGSFGIVFQAKCLETG--ETVAIKKVLQ-----DKRYKNRELQTM-RLLDHPNVV 147
+ V+G+G+FG V +A+ + G AIK++ + D R EL+ + +L HPN++
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 148 SL-KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALA 206
+L C + YL L +E+ P SR + P + T +
Sbjct: 80 NLLGAC------EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 133
Query: 207 YIHGGIGVC------------HRDIKPQNLLVNPHTHQVKLCDFGSAK---VLVKGEPNI 251
+H V HRD+ +N+LV + + K+ DFG ++ V VK +
Sbjct: 134 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN-YVAKIADFGLSRGQEVYVK--KTM 190
Query: 252 SYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELL 288
+ R+ L + YTT D+WS G +L E++
Sbjct: 191 GRLPVRWMAIESLNYSV--YTTNSDVWSYGVLLWEIV 225
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 99 VGQGSFGIVFQAKC-LETGETVAIK------KVLQDKRYKN---RELQTMRLLDHPNVVS 148
+G GSFG+V + + +G+TV++ VL + RE+ M LDH N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 149 LKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALA 206
L + + +V E P + R+ KH L + Y Q+ +
Sbjct: 76 LYGVVLTPP------MKMVTELAPLGSLLDRLRKHQG----HFLLGTLSRYAVQVAEGMG 125
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR------ 260
Y+ + HRD+ +NLL+ VK+ DFG + L + + + Y+ + +
Sbjct: 126 YLESKRFI-HRDLAARNLLLATRD-LVKIGDFGLMRALPQNDDH--YVMQEHRKVPFAWC 181
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIK 308
APE + T ++ A D W G L E+ GQ + G +G L +I K
Sbjct: 182 APESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 31/211 (14%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKV-LQDKRYKNRELQTMRL--LDHPNVVSLKHCFF 154
V +G FG V++A+ L E VA+K +QDK+ E + L + H N++ F
Sbjct: 31 VKARGRFGCVWKAQLLN--EYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQ-----F 83
Query: 155 STTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKL--YTYQICRALAYIHGGI 212
+K +++ L + T + S + + + +L + R LAY+H I
Sbjct: 84 IGAEKRGTSVDVDLWLI--TAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDI 141
Query: 213 ---------GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP---NISYICSRYYR 260
+ HRDIK +N+L+ + + DFG A G+ + +R Y
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVLLKNNLTAC-IADFGLALKFEAGKSAGDTHGQVGTRRYM 200
Query: 261 APELIFGATEYTTA----IDIWSVGCVLAEL 287
APE++ GA + ID++++G VL EL
Sbjct: 201 APEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 99 VGQGSFGIVFQAKC-LETGETVAIK------KVLQDKRYKN---RELQTMRLLDHPNVVS 148
+G GSFG+V + + +G+TV++ VL + RE+ M LDH N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 149 LKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALA 206
L + + +V E P + R+ KH L + Y Q+ +
Sbjct: 76 LYGVVLTPP------MKMVTELAPLGSLLDRLRKHQG----HFLLGTLSRYAVQVAEGMG 125
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR------ 260
Y+ + HRD+ +NLL+ VK+ DFG + L + + + Y+ + +
Sbjct: 126 YLESKRFI-HRDLAARNLLLATRD-LVKIGDFGLMRALPQNDDH--YVMQEHRKVPFAWC 181
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIK 308
APE + T ++ A D W G L E+ GQ + G +G L +I K
Sbjct: 182 APESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 151
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 36 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 87
Query: 152 CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGG 211
F + K +L +V ++ + + H + +I + Q + + Y+H
Sbjct: 88 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 143
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSA--KVLVKGEPNISYIC-SRYYRAPELIFGA 268
+ HRD+K N+ ++ VK+ DFG A K G + S + APE+I
Sbjct: 144 -SIIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 201
Query: 269 TE--YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 307
+ Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 202 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 242
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 99 VGQGSFGIVFQAKC-LETGETVAIK------KVLQDKRYKN---RELQTMRLLDHPNVVS 148
+G GSFG+V + + +G+TV++ VL + RE+ M LDH N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 149 LKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALA 206
L + + +V E P + R+ KH L + Y Q+ +
Sbjct: 80 LYGVVLTPP------MKMVTELAPLGSLLDRLRKHQG----HFLLGTLSRYAVQVAEGMG 129
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR------ 260
Y+ + HRD+ +NLL+ VK+ DFG + L + + + Y+ + +
Sbjct: 130 YLESKRFI-HRDLAARNLLLATRD-LVKIGDFGLMRALPQNDDH--YVMQEHRKVPFAWC 185
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIK 308
APE + T ++ A D W G L E+ GQ + G +G L +I K
Sbjct: 186 APESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 103/221 (46%), Gaps = 26/221 (11%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 151
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N+ L
Sbjct: 16 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNI--LLF 69
Query: 152 CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGG 211
+ST + L +V ++ + + H + +I + Q + + Y+H
Sbjct: 70 MGYSTAPQ----LAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 123
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGA 268
+ HRD+K N+ ++ VK+ DFG A V + + + S + APE+I
Sbjct: 124 -SIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 269 TE--YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 307
+ Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 151
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 44 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 95
Query: 152 CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGG 211
F + K +L +V ++ + + H + +I + Q + + Y+H
Sbjct: 96 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 151
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSA--KVLVKGEPNISYIC-SRYYRAPELIFGA 268
+ HRD+K N+ ++ VK+ DFG A K G + S + APE+I
Sbjct: 152 -SIIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 269 TE--YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 307
+ Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 97/227 (42%), Gaps = 30/227 (13%)
Query: 99 VGQGSFGIVFQAKC-LETGETVAIK------KVLQDKRYKN---RELQTMRLLDHPNVVS 148
+G GSFG+V + + +G+TV++ VL + RE+ M LDH N++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 149 LKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALA 206
L + + +V E P + R+ KH L + Y Q+ +
Sbjct: 86 LYGVVLTPP------MKMVTELAPLGSLLDRLRKHQG----HFLLGTLSRYAVQVAEGMG 135
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR----YYRAP 262
Y+ + HRD+ +NLL+ VK+ DFG + L + + + R + AP
Sbjct: 136 YLESKRFI-HRDLAARNLLLATRD-LVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 193
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIK 308
E + T ++ A D W G L E+ GQ + G +G L +I K
Sbjct: 194 ESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 239
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 151
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 16 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 67
Query: 152 CFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGG 211
F + K +L +V ++ + + H + +I + Q + + Y+H
Sbjct: 68 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 123
Query: 212 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSA--KVLVKGEPNISYIC-SRYYRAPELIFGA 268
+ HRD+K N+ ++ VK+ DFG A K G + S + APE+I
Sbjct: 124 -SIIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 269 TE--YTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 307
+ Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 27/208 (12%)
Query: 96 ERVVGQGSFGIVFQAKCLETGET-----VAIKKVLQDKRYKNR-----ELQTMRLLDHPN 145
++V+G G FG V++ L+T VAIK + K R E M H N
Sbjct: 49 QKVIGAGEFGEVYKG-MLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHN 107
Query: 146 VVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRAL 205
++ L+ + ++ E++ + K ++ + I +
Sbjct: 108 IIRLEGVISKYKP-----MMIITEYMENGA--LDKFLREKDGEFSVLQLVGMLRGIAAGM 160
Query: 206 AYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYR 260
Y+ + HRD+ +N+LVN + K+ DFG ++VL + +P +Y S +
Sbjct: 161 KYL-ANMNYVHRDLAARNILVNSNL-VCKVSDFGLSRVL-EDDPEATYTTSGGKIPIRWT 217
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELL 288
APE I ++T+A D+WS G V+ E++
Sbjct: 218 APEAI-SYRKFTSASDVWSFGIVMWEVM 244
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 97/227 (42%), Gaps = 30/227 (13%)
Query: 99 VGQGSFGIVFQAKC-LETGETVAIK------KVLQDKRYKN---RELQTMRLLDHPNVVS 148
+G GSFG+V + + +G+TV++ VL + RE+ M LDH N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 149 LKHCFFSTTDKDELYLNLVLEFVP--ETVYRVAKHYSRASQRMPLIYVKLYTYQICRALA 206
L + + +V E P + R+ KH L + Y Q+ +
Sbjct: 76 LYGVVLTPP------MKMVTELAPLGSLLDRLRKHQG----HFLLGTLSRYAVQVAEGMG 125
Query: 207 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR----YYRAP 262
Y+ + HRD+ +NLL+ VK+ DFG + L + + + R + AP
Sbjct: 126 YLESKRFI-HRDLAARNLLLATRD-LVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 183
Query: 263 ELIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIK 308
E + T ++ A D W G L E+ GQ + G +G L +I K
Sbjct: 184 ESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 16/163 (9%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNREL----QTMRLL 141
+P+ + R +G GSFG ++ ++T E VAIK L++ + K+ +L + R+L
Sbjct: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK--LENVKTKHPQLLYESKIYRIL 59
Query: 142 DHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQI 201
+ F D + L ++L+ + + ++ S+++ L V + Q+
Sbjct: 60 QGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDL-------FNFCSRKLSLKTVLMLADQM 112
Query: 202 CRALAYIHGGIGVCHRDIKPQNLL--VNPHTHQVKLCDFGSAK 242
+ ++H HRDIKP N L + +QV + DFG AK
Sbjct: 113 INRVEFVHSK-SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 215 CHRDIKPQNLLVNPHTHQVKLCDFG--SAKVLVKGEPNISYICSRYYRAPELIFGATEYT 272
HRD+KP+N+LV+ L DFG SA K + + + YY APE F + T
Sbjct: 156 THRDVKPENILVSADDF-AYLVDFGIASATTDEKLTQLGNTVGTLYYXAPER-FSESHAT 213
Query: 273 TAIDIWSVGCVLAELLLGQPLFPGE 297
DI+++ CVL E L G P + G+
Sbjct: 214 YRADIYALTCVLYECLTGSPPYQGD 238
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 100/236 (42%), Gaps = 45/236 (19%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVL----------QDKRYKNRELQTMRLL-DHPN 145
+ +G G+FG V +A G+ A+ KV +K EL+ M L H N
Sbjct: 37 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 96
Query: 146 VVSL--------------KHC-------FFSTTDKDELYLNLVLEFVPETVYRVAKHYSR 184
+V+L ++C F + L +L PE + K R
Sbjct: 97 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGL---DKEDGR 153
Query: 185 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL 244
+ L++ ++ Q+ + +A++ HRD+ +N+L+ + H K+ DFG A+ +
Sbjct: 154 PLELRDLLH---FSSQVAQGMAFL-ASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDI 208
Query: 245 VKGEPNISYICSRY---YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPG 296
+ I +R + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 209 MNDSNYIVKGNARLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 263
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 25/213 (11%)
Query: 91 ISYMA-ERVVGQGSFGIVFQAKCLETGET---VAIKKVLQDKRYKNR-----ELQTMRLL 141
+SY+ E V+G G FG V + + G+ VAIK + + R E M
Sbjct: 15 VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF 74
Query: 142 DHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQI 201
+HPN++ L+ + + + ++ EF+ + + +I + I
Sbjct: 75 EHPNIIRLEGVV-----TNSMPVMILTEFMENGA--LDSFLRLNDGQFTVIQLVGMLRGI 127
Query: 202 CRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR---- 257
+ Y+ + HRD+ +N+LVN + K+ DFG ++ L + + + S
Sbjct: 128 ASGMRYL-AEMSYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEENSSDPTETSSLGGKI 185
Query: 258 --YYRAPELIFGATEYTTAIDIWSVGCVLAELL 288
+ APE I ++T+A D WS G V+ E++
Sbjct: 186 PIRWTAPEAI-AFRKFTSASDAWSYGIVMWEVM 217
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 52/294 (17%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 138
P I + E V+G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 45 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 103
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKH-----YSRASQRMPLIY 193
+ HPNV+SL L + L E P V KH + R P +
Sbjct: 104 KDFSHPNVLSL------------LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 151
Query: 194 VKL-YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 252
+ + Q+ + + Y+ HRD+ +N +++ VK+ DFG A+ + E
Sbjct: 152 DLIGFGLQVAKGMKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE---- 205
Query: 253 YICSRYYRAPEL--------IFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQL 303
Y +L ++TT D+WS G +L EL+ G P +P + D
Sbjct: 206 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 265
Query: 304 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 357
V ++ + + + P Y ++ WH M P +LVSR+
Sbjct: 266 VYLL--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 309
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 115/296 (38%), Gaps = 56/296 (18%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR------------E 134
P I + E V+G+G FG V+ L+ KK+ + NR E
Sbjct: 26 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 80
Query: 135 LQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKH-----YSRASQRM 189
M+ HPNV+SL L + L E P V KH + R
Sbjct: 81 GIIMKDFSHPNVLSL------------LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN 128
Query: 190 PLIYVKL-YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 248
P + + + Q+ + + Y+ HRD+ +N +++ VK+ DFG A+ + E
Sbjct: 129 PTVKDLIGFGLQVAKGMKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE 186
Query: 249 PNISY------ICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVD 301
+ + ++ L ++TT D+WS G +L EL+ G P +P + D
Sbjct: 187 XXSVHNKTGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 244
Query: 302 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 357
V ++ + + + P Y ++ WH M P +LVSR+
Sbjct: 245 ITVYLL--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 290
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 52/294 (17%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 138
P I + E V+G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 25 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 83
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKH-----YSRASQRMPLIY 193
+ HPNV+SL L + L E P V KH + R P +
Sbjct: 84 KDFSHPNVLSL------------LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 131
Query: 194 VKL-YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 252
+ + Q+ + + Y+ HRD+ +N +++ VK+ DFG A+ + E
Sbjct: 132 DLIGFGLQVAKGMKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE---- 185
Query: 253 YICSRYYRAPEL--------IFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQL 303
Y +L ++TT D+WS G +L EL+ G P +P + D
Sbjct: 186 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 245
Query: 304 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 357
V ++ + + + P Y ++ WH M P +LVSR+
Sbjct: 246 VYLL--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 289
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 35/217 (16%)
Query: 96 ERVVGQGSFGIVFQAKCLETG--ETVAIKKVLQ-----DKRYKNRELQTM-RLLDHPNVV 147
+ V+G+G+FG V +A+ + G AIK++ + D R EL+ + +L HPN++
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 148 SL-KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALA 206
+L C + YL L +E+ P SR + P + T +
Sbjct: 87 NLLGAC------EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 140
Query: 207 YIHGGIGVC------------HRDIKPQNLLVNPHTHQVKLCDFGSAK---VLVKGEPNI 251
+H V HR++ +N+LV + + K+ DFG ++ V VK +
Sbjct: 141 LLHFAADVARGMDYLSQKQFIHRNLAARNILVGEN-YVAKIADFGLSRGQEVYVK--KTM 197
Query: 252 SYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELL 288
+ R+ L + YTT D+WS G +L E++
Sbjct: 198 GRLPVRWMAIESLNYSV--YTTNSDVWSYGVLLWEIV 232
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 95/235 (40%), Gaps = 53/235 (22%)
Query: 96 ERVVGQGSFGIVFQAKCLETGET-----VAIKKV----LQDKRYKNRELQTMRLLDHPNV 146
+R +G+G+FG VF A+C T VA+K + L ++ RE + + L H ++
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFV-------------PETVYRVAKHYSRASQRMPLIY 193
V + D D L +V E++ P+ + V +A + L
Sbjct: 80 VKF---YGVCGDGDPLI--MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134
Query: 194 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 253
+ QI + Y+ HRD+ +N LV + VK+ DFG ++
Sbjct: 135 MLHIASQIASGMVYL-ASQHFVHRDLATRNCLVGANL-LVKIGDFGMSR---------DV 183
Query: 254 ICSRYYRA------------PELIFGATEYTTAIDIWSVGCVLAELLL--GQPLF 294
+ YYR PE I ++TT D+WS G +L E+ QP F
Sbjct: 184 YSTDYYRVGGHTMLPIRWMPPESIM-YRKFTTESDVWSFGVILWEIFTYGKQPWF 237
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 132/314 (42%), Gaps = 69/314 (21%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGET---VAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 151
R +GQGSFG+V++ A+ + GE VA+K V + + R + L+ +V+
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER----IEFLNEASVMKGFT 78
Query: 152 C-----FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ--------RMPLIYVKL-- 196
C K + L +V+E + + K Y R+ + R P ++
Sbjct: 79 CHHVVRLLGVVSKGQPTL-VVMELM---AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 134
Query: 197 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE---PNISY 253
+I +AY++ V HRD+ +N +V H VK+ DFG + + + +
Sbjct: 135 MAAEIADGMAYLNAKKFV-HRDLAARNCMV-AHDFTVKIGDFGMTRDIXETDXXRKGGKG 192
Query: 254 ICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGT 312
+ + APE + +TT+ D+WS G VL E+ L + + G S +Q+++ +
Sbjct: 193 LLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKFV----- 245
Query: 313 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
M+ Y + P P DL+ Q++PN+R T LE
Sbjct: 246 --------MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPNMRPTFLEIV 283
Query: 373 ------IHPFFYEL 380
+HP F E+
Sbjct: 284 NLLKDDLHPSFPEV 297
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 52/294 (17%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 138
P I + E V+G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 27 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 85
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKH-----YSRASQRMPLIY 193
+ HPNV+SL L + L E P V KH + R P +
Sbjct: 86 KDFSHPNVLSL------------LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 133
Query: 194 VKL-YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 252
+ + Q+ + + Y+ HRD+ +N +++ VK+ DFG A+ + E
Sbjct: 134 DLIGFGLQVAKGMKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE---- 187
Query: 253 YICSRYYRAPEL--------IFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQL 303
Y +L ++TT D+WS G +L EL+ G P +P + D
Sbjct: 188 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 247
Query: 304 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 357
V ++ + + + P Y ++ WH M P +LVSR+
Sbjct: 248 VYLL--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 291
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 52/294 (17%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 138
P I + E V+G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 19 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 77
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKH-----YSRASQRMPLIY 193
+ HPNV+SL L + L E P V KH + R P +
Sbjct: 78 KDFSHPNVLSL------------LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 125
Query: 194 VKL-YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 252
+ + Q+ + + Y+ HRD+ +N +++ VK+ DFG A+ + E
Sbjct: 126 DLIGFGLQVAKGMKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE---- 179
Query: 253 YICSRYYRAPEL--------IFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQL 303
Y +L ++TT D+WS G +L EL+ G P +P + D
Sbjct: 180 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 239
Query: 304 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 357
V ++ + + + P Y ++ WH M P +LVSR+
Sbjct: 240 VYLL--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 283
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 52/294 (17%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 138
P I + E V+G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 46 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 104
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKH-----YSRASQRMPLIY 193
+ HPNV+SL L + L E P V KH + R P +
Sbjct: 105 KDFSHPNVLSL------------LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 152
Query: 194 VKL-YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 252
+ + Q+ + + Y+ HRD+ +N +++ VK+ DFG A+ + E
Sbjct: 153 DLIGFGLQVAKGMKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE---- 206
Query: 253 YICSRYYRAPEL--------IFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQL 303
Y +L ++TT D+WS G +L EL+ G P +P + D
Sbjct: 207 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 266
Query: 304 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 357
V ++ + + + P Y ++ WH M P +LVSR+
Sbjct: 267 VYLL--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 310
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 52/294 (17%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 138
P I + E V+G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 24 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 82
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKH-----YSRASQRMPLIY 193
+ HPNV+SL L + L E P V KH + R P +
Sbjct: 83 KDFSHPNVLSL------------LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 130
Query: 194 VKL-YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 252
+ + Q+ + + Y+ HRD+ +N +++ VK+ DFG A+ + E
Sbjct: 131 DLIGFGLQVAKGMKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE---- 184
Query: 253 YICSRYYRAPEL--------IFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQL 303
Y +L ++TT D+WS G +L EL+ G P +P + D
Sbjct: 185 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 244
Query: 304 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 357
V ++ + + + P Y ++ WH M P +LVSR+
Sbjct: 245 VYLL--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 288
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 123/291 (42%), Gaps = 46/291 (15%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 138
P I + E V+G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 28 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 86
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKH-----YSRASQRMPLIY 193
+ HPNV+SL L + L E P V KH + R P +
Sbjct: 87 KDFSHPNVLSL------------LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 134
Query: 194 VKL-YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 252
+ + Q+ + + ++ HRD+ +N +++ VK+ DFG A+ ++ E +
Sbjct: 135 DLIGFGLQVAKGMKFL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMLDKEFDSV 192
Query: 253 YICSRY-----YRAPELIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVEI 306
+ + + A E + ++TT D+WS G +L EL+ G P +P + D V +
Sbjct: 193 HNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 251
Query: 307 IKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 357
+ + + + P Y ++ WH M P +LVSR+
Sbjct: 252 L--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 292
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 124/292 (42%), Gaps = 42/292 (14%)
Query: 96 ERVVGQGSFGIVFQAKCLETGET---VAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 147
E+++G G G V + G+ VAIK + + R E M DHPN++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVP----ETVYRVAKHYSRASQRMPLIYVKLYTYQICR 203
L+ + L + +V E++ +T R Q + ++ +
Sbjct: 114 RLE----GVVTRGRLAM-IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR------GVGA 162
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----Y 258
+ Y+ +G HRD+ +N+LV+ + K+ DFG ++VL + +P+ + +
Sbjct: 163 GMRYL-SDLGYVHRDLAARNVLVDSNL-VCKVSDFGLSRVL-EDDPDAAXTTTGGKIPIR 219
Query: 259 YRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGTPTREE 317
+ APE I T +++A D+WS G V+ E+L G+ + + D + + E
Sbjct: 220 WTAPEAIAFRT-FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV--------EEG 270
Query: 318 IKCMNPNYTEFKFPQIKAHPWHKIFHKR-MPPEAVDLVSRLLQYSPNLRCTA 368
+ P Q+ WHK +R + V ++ L++ +LR TA
Sbjct: 271 YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESLRATA 322
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 52/294 (17%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 138
P I + E V+G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 22 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 80
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKH-----YSRASQRMPLIY 193
+ HPNV+SL L + L E P V KH + R P +
Sbjct: 81 KDFSHPNVLSL------------LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 128
Query: 194 VKL-YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 252
+ + Q+ + + Y+ HRD+ +N +++ VK+ DFG A+ + E
Sbjct: 129 DLIGFGLQVAKGMKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE---- 182
Query: 253 YICSRYYRAPEL--------IFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQL 303
Y +L ++TT D+WS G +L EL+ G P +P + D
Sbjct: 183 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 242
Query: 304 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 357
V ++ + + + P Y ++ WH M P +LVSR+
Sbjct: 243 VYLL--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 286
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 52/294 (17%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 138
P I + E V+G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 26 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 84
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKH-----YSRASQRMPLIY 193
+ HPNV+SL L + L E P V KH + R P +
Sbjct: 85 KDFSHPNVLSL------------LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 132
Query: 194 VKL-YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 252
+ + Q+ + + Y+ HRD+ +N +++ VK+ DFG A+ + E
Sbjct: 133 DLIGFGLQVAKGMKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE---- 186
Query: 253 YICSRYYRAPEL--------IFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQL 303
Y +L ++TT D+WS G +L EL+ G P +P + D
Sbjct: 187 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 246
Query: 304 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 357
V ++ + + + P Y ++ WH M P +LVSR+
Sbjct: 247 VYLL--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 290
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 52/294 (17%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 138
P I + E V+G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 27 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 85
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKH-----YSRASQRMPLIY 193
+ HPNV+SL L + L E P V KH + R P +
Sbjct: 86 KDFSHPNVLSL------------LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 133
Query: 194 VKL-YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 252
+ + Q+ + + Y+ HRD+ +N +++ VK+ DFG A+ + E
Sbjct: 134 DLIGFGLQVAKGMKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE---- 187
Query: 253 YICSRYYRAPEL--------IFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQL 303
Y +L ++TT D+WS G +L EL+ G P +P + D
Sbjct: 188 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 247
Query: 304 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 357
V ++ + + + P Y ++ WH M P +LVSR+
Sbjct: 248 VYLL--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 291
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 121/292 (41%), Gaps = 48/292 (16%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 138
P I + E V+G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 32 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 90
Query: 139 RLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKH-----YSRASQRMPLIY 193
+ HPNV+SL L + L E P V KH + R P +
Sbjct: 91 KDFSHPNVLSL------------LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 138
Query: 194 VKL-YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 252
+ + Q+ + + ++ HRD+ +N +++ VK+ DFG A+ + E +
Sbjct: 139 DLIGFGLQVAKGMKFL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSV 196
Query: 253 Y------ICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQLVE 305
+ + ++ L ++TT D+WS G +L EL+ G P +P + D V
Sbjct: 197 HNKTGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 254
Query: 306 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 357
++ + + + P Y ++ WH M P +LVSR+
Sbjct: 255 LL--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 296
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 116/296 (39%), Gaps = 56/296 (18%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR------------E 134
P I + E V+G+G FG V+ L+ KK+ + NR E
Sbjct: 86 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 140
Query: 135 LQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKH-----YSRASQRM 189
M+ HPNV+SL L + L E P V KH + R
Sbjct: 141 GIIMKDFSHPNVLSL------------LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN 188
Query: 190 PLIYVKL-YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 248
P + + + Q+ + + ++ HRD+ +N +++ VK+ DFG A+ + E
Sbjct: 189 PTVKDLIGFGLQVAKGMKFL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE 246
Query: 249 PNISYICSRYYRAPELIFGATE------YTTAIDIWSVGCVLAELLL-GQPLFPGESGVD 301
+ ++ + + A E +TT D+WS G +L EL+ G P +P + D
Sbjct: 247 --FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 304
Query: 302 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 357
V ++ + + + P Y ++ WH M P +LVSR+
Sbjct: 305 ITVYLL--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 350
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 116/296 (39%), Gaps = 56/296 (18%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR------------E 134
P I + E V+G+G FG V+ L+ KK+ + NR E
Sbjct: 27 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 81
Query: 135 LQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKH-----YSRASQRM 189
M+ HPNV+SL L + L E P V KH + R
Sbjct: 82 GIIMKDFSHPNVLSL------------LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN 129
Query: 190 PLIYVKL-YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 248
P + + + Q+ + + ++ HRD+ +N +++ VK+ DFG A+ + E
Sbjct: 130 PTVKDLIGFGLQVAKGMKFL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE 187
Query: 249 PNISY------ICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVD 301
+ + + ++ L ++TT D+WS G +L EL+ G P +P + D
Sbjct: 188 FDSVHNKTGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 245
Query: 302 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 357
V ++ + + + P Y ++ WH M P +LVSR+
Sbjct: 246 ITVYLL--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 291
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 117/295 (39%), Gaps = 54/295 (18%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR------------E 134
P I + E V+G+G FG V+ L+ KK+ + NR E
Sbjct: 28 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 82
Query: 135 LQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKH-----YSRASQRM 189
M+ HPNV+SL L + L E P V KH + R
Sbjct: 83 GIIMKDFSHPNVLSL------------LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN 130
Query: 190 PLIYVKL-YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 248
P + + + Q+ + + ++ HRD+ +N +++ VK+ DFG A+ + E
Sbjct: 131 PTVKDLIGFGLQVAKGMKFL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE 188
Query: 249 PNISYICSRY-----YRAPELIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQ 302
+ + + + A E + ++TT D+WS G +L EL+ G P +P + D
Sbjct: 189 FDSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 247
Query: 303 LVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 357
V ++ + + + P Y ++ WH M P +LVSR+
Sbjct: 248 TVYLL--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 292
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 117/295 (39%), Gaps = 54/295 (18%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR------------E 134
P I + E V+G+G FG V+ L+ KK+ + NR E
Sbjct: 27 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 81
Query: 135 LQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKH-----YSRASQRM 189
M+ HPNV+SL L + L E P V KH + R
Sbjct: 82 GIIMKDFSHPNVLSL------------LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN 129
Query: 190 PLIYVKL-YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 248
P + + + Q+ + + ++ HRD+ +N +++ VK+ DFG A+ + E
Sbjct: 130 PTVKDLIGFGLQVAKGMKFL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE 187
Query: 249 PNISYICSRY-----YRAPELIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVDQ 302
+ + + + A E + ++TT D+WS G +L EL+ G P +P + D
Sbjct: 188 FDSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 246
Query: 303 LVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 357
V ++ + + + P Y ++ WH M P +LVSR+
Sbjct: 247 TVYLL--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 291
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 116/296 (39%), Gaps = 56/296 (18%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR------------E 134
P I + E V+G+G FG V+ L+ KK+ + NR E
Sbjct: 25 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 79
Query: 135 LQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKH-----YSRASQRM 189
M+ HPNV+SL L + L E P V KH + R
Sbjct: 80 GIIMKDFSHPNVLSL------------LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN 127
Query: 190 PLIYVKL-YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 248
P + + + Q+ + + ++ HRD+ +N +++ VK+ DFG A+ + E
Sbjct: 128 PTVKDLIGFGLQVAKGMKFL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE 185
Query: 249 PNISY------ICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPGESGVD 301
+ + + ++ L ++TT D+WS G +L EL+ G P +P + D
Sbjct: 186 FDSVHNKTGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 243
Query: 302 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 357
V ++ + + + P Y ++ WH M P +LVSR+
Sbjct: 244 ITVYLL--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 289
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 90/212 (42%), Gaps = 25/212 (11%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQD--KRYKNRELQTMRLL---DHPNVVSLKHCF 153
+G+G+FG VF + VA+K + K + LQ R+L HPN+V L
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL---I 178
Query: 154 FSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIG 213
T K +Y +V+E V + A R VK + A A +
Sbjct: 179 GVCTQKQPIY--IVMELVQGGDFLTFLRTEGARLR-----VKTLLQMVGDAAAGMEYLES 231
Query: 214 VC--HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPE-LIFG 267
C HRD+ +N LV + +K+ DFG ++ G S + + APE L +G
Sbjct: 232 KCCIHRDLAARNCLVT-EKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYG 290
Query: 268 ATEYTTAIDIWSVGCVLAELL-LGQPLFPGES 298
Y++ D+WS G +L E LG +P S
Sbjct: 291 --RYSSESDVWSFGILLWETFSLGASPYPNLS 320
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 40/215 (18%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIK---KVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS 155
VG+G +G V++ L GE+VA+K + ++ E+ LL H N++ F
Sbjct: 16 VGKGRYGEVWRG--LWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILG-----FI 68
Query: 156 TTDKDELYLNLVLEFVPETVYRVAKHYSRASQRM---PLIYVKLYTYQICRALAYIH--- 209
+D + L + T Y QR P + ++L C LA++H
Sbjct: 69 ASDMTSRNSSTQLWLI--THYHEHGSLYDFLQRQTLEPHLALRLAVSAAC-GLAHLHVEI 125
Query: 210 ----GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP-----NISYICSRYYR 260
G + HRD K +N+LV + Q + D G A + +G N + ++ Y
Sbjct: 126 FGTQGKPAIAHRDFKSRNVLVKSNL-QCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYM 184
Query: 261 APELI--------FGATEYTTAIDIWSVGCVLAEL 287
APE++ F + ++T DIW+ G VL E+
Sbjct: 185 APEVLDEQIRTDCFESYKWT---DIWAFGLVLWEI 216
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 89/214 (41%), Gaps = 29/214 (13%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQD--KRYKNRELQTMRLL---DHPNVVSLKHCF 153
+G+G+FG VF + VA+K + K + LQ R+L HPN+V L
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL---I 178
Query: 154 FSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIG 213
T K +Y +V+E V + A R VK + A A +
Sbjct: 179 GVCTQKQPIY--IVMELVQGGDFLTFLRTEGARLR-----VKTLLQMVGDAAAGMEYLES 231
Query: 214 VC--HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE- 270
C HRD+ +N LV + +K+ DFG + + E + Y S R + + A E
Sbjct: 232 KCCIHRDLAARNCLVT-EKNVLKISDFG----MSREEADGVYAASGGLRQVPVKWTAPEA 286
Query: 271 -----YTTAIDIWSVGCVLAELL-LGQPLFPGES 298
Y++ D+WS G +L E LG +P S
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFSLGASPYPNLS 320
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 131/314 (41%), Gaps = 69/314 (21%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGET---VAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 151
R +GQGSFG+V++ A+ + GE VA+K V + + R + L+ +V+
Sbjct: 20 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER----IEFLNEASVMKGFT 75
Query: 152 C-----FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ--------RMPLIYVKL-- 196
C K + L +V+E + + K Y R+ + R P ++
Sbjct: 76 CHHVVRLLGVVSKGQPTL-VVMELM---AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 131
Query: 197 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE---PNISY 253
+I +AY++ V HRD+ +N +V H VK+ DFG + + + +
Sbjct: 132 MAAEIADGMAYLNAKKFV-HRDLAARNCMV-AHDFTVKIGDFGMTRDIXETDXXRKGGKG 189
Query: 254 ICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGT 312
+ + APE + +TT+ D+WS G VL E+ L + + G S +Q+++ +
Sbjct: 190 LLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKFV----- 242
Query: 313 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
M+ Y + P P DL+ Q++P +R T LE
Sbjct: 243 --------MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPKMRPTFLEIV 280
Query: 373 ------IHPFFYEL 380
+HP F E+
Sbjct: 281 NLLKDDLHPSFPEV 294
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 133/323 (41%), Gaps = 87/323 (26%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGET---VAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 151
R +GQGSFG+V++ A+ + GE VA+K V + + R + L+ +V+
Sbjct: 24 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER----IEFLNEASVMKGFT 79
Query: 152 C-----FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ--------RMPLIYVKL-- 196
C K + L +V+E + + K Y R+ + R P ++
Sbjct: 80 CHHVVRLLGVVSKGQPTL-VVMELM---AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 135
Query: 197 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 256
+I +AY++ V HR++ +N +V H VK+ DFG + + + +
Sbjct: 136 MAAEIADGMAYLNAKKFV-HRNLAARNCMV-AHDFTVKIGDFGMTRDIYE---------T 184
Query: 257 RYYR------------APELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQL 303
YYR APE + +TT+ D+WS G VL E+ L + + G S +Q+
Sbjct: 185 DYYRKGGKGLLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQV 242
Query: 304 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPN 363
++ + M+ Y + P P DL+ Q++PN
Sbjct: 243 LKFV-------------MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPN 275
Query: 364 LRCTALEAC------IHPFFYEL 380
+R T LE +HP F E+
Sbjct: 276 MRPTFLEIVNLLKDDLHPSFPEV 298
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 133/323 (41%), Gaps = 87/323 (26%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGET---VAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 151
R +GQGSFG+V++ A+ + GE VA+K V + + R + L+ +V+
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER----IEFLNEASVMKGFT 78
Query: 152 C-----FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ--------RMPLIYVKL-- 196
C K + L +V+E + + K Y R+ + R P ++
Sbjct: 79 CHHVVRLLGVVSKGQPTL-VVMELM---AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 134
Query: 197 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 256
+I +AY++ V HR++ +N +V H VK+ DFG + + + +
Sbjct: 135 MAAEIADGMAYLNAKKFV-HRNLAARNCMV-AHDFTVKIGDFGMTRDIYE---------T 183
Query: 257 RYYR------------APELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQL 303
YYR APE + +TT+ D+WS G VL E+ L + + G S +Q+
Sbjct: 184 DYYRKGGKGLLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQV 241
Query: 304 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPN 363
++ + M+ Y + P P DL+ Q++PN
Sbjct: 242 LKFV-------------MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPN 274
Query: 364 LRCTALEAC------IHPFFYEL 380
+R T LE +HP F E+
Sbjct: 275 MRPTFLEIVNLLKDDLHPSFPEV 297
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 131/314 (41%), Gaps = 69/314 (21%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGET---VAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 151
R +GQGSFG+V++ A+ + GE VA+K V + + R + L+ +V+
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER----IEFLNEASVMKGFT 78
Query: 152 C-----FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ--------RMPLIYVKL-- 196
C K + L +V+E + + K Y R+ + R P ++
Sbjct: 79 CHHVVRLLGVVSKGQPTL-VVMELM---AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 134
Query: 197 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE---PNISY 253
+I +AY++ V HRD+ +N +V H VK+ DFG + + + +
Sbjct: 135 MAAEIADGMAYLNAKKFV-HRDLAARNCMV-AHDFTVKIGDFGMTRDIXETDXXRKGGKG 192
Query: 254 ICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGT 312
+ + APE + +TT+ D+WS G VL E+ L + + G S +Q+++ +
Sbjct: 193 LLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKFV----- 245
Query: 313 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 372
M+ Y + P P DL+ Q++P +R T LE
Sbjct: 246 --------MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
Query: 373 ------IHPFFYEL 380
+HP F E+
Sbjct: 284 NLLKDDLHPSFPEV 297
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 132/323 (40%), Gaps = 87/323 (26%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGET---VAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 151
R +GQGSFG+V++ A+ + GE VA+K V + + R + L+ +V+
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER----IEFLNEASVMKGFT 77
Query: 152 C-----FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ--------RMPLIYVKL-- 196
C K + L +V+E + + K Y R+ + R P ++
Sbjct: 78 CHHVVRLLGVVSKGQPTL-VVMELM---AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 133
Query: 197 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 256
+I +AY++ V HRD+ +N +V H VK+ DFG + + + +
Sbjct: 134 MAAEIADGMAYLNAKKFV-HRDLAARNCMV-AHDFTVKIGDFGMTRDIYE---------T 182
Query: 257 RYYR------------APELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQL 303
YYR APE + +TT+ D+WS G VL E+ L + + G S +Q+
Sbjct: 183 DYYRKGGKGLLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQV 240
Query: 304 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPN 363
++ + M+ Y + P P DL+ Q++P
Sbjct: 241 LKFV-------------MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPK 273
Query: 364 LRCTALEAC------IHPFFYEL 380
+R T LE +HP F E+
Sbjct: 274 MRPTFLEIVNLLKDDLHPSFPEV 296
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 132/323 (40%), Gaps = 87/323 (26%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGET---VAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 151
R +GQGSFG+V++ A+ + GE VA+K V + + R + L+ +V+
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER----IEFLNEASVMKGFT 78
Query: 152 C-----FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ--------RMPLIYVKL-- 196
C K + L +V+E + + K Y R+ + R P ++
Sbjct: 79 CHHVVRLLGVVSKGQPTL-VVMELM---AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 134
Query: 197 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 256
+I +AY++ V HRD+ +N +V H VK+ DFG + + + +
Sbjct: 135 MAAEIADGMAYLNAKKFV-HRDLAARNCMV-AHDFTVKIGDFGMTRDIYE---------T 183
Query: 257 RYYR------------APELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQL 303
YYR APE + +TT+ D+WS G VL E+ L + + G S +Q+
Sbjct: 184 AYYRKGGKGLLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQV 241
Query: 304 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPN 363
++ + M+ Y + P P DL+ Q++P
Sbjct: 242 LKFV-------------MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPK 274
Query: 364 LRCTALEAC------IHPFFYEL 380
+R T LE +HP F E+
Sbjct: 275 MRPTFLEIVNLLKDDLHPSFPEV 297
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 132/323 (40%), Gaps = 87/323 (26%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGET---VAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 151
R +GQGSFG+V++ A+ + GE VA+K V + + R + L+ +V+
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER----IEFLNEASVMKGFT 78
Query: 152 C-----FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQ--------RMPLIYVKL-- 196
C K + L +V+E + + K Y R+ + R P ++
Sbjct: 79 CHHVVRLLGVVSKGQPTL-VVMELM---AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 134
Query: 197 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 256
+I +AY++ V HRD+ +N +V H VK+ DFG + + + +
Sbjct: 135 MAAEIADGMAYLNAKKFV-HRDLAARNCMV-AHDFTVKIGDFGMTRDIYE---------T 183
Query: 257 RYYR------------APELIFGATEYTTAIDIWSVGCVLAELL-LGQPLFPGESGVDQL 303
YYR APE + +TT+ D+WS G VL E+ L + + G S +Q+
Sbjct: 184 DYYRKGGKGLLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQV 241
Query: 304 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPN 363
++ + M+ Y + P P DL+ Q++P
Sbjct: 242 LKFV-------------MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPK 274
Query: 364 LRCTALEAC------IHPFFYEL 380
+R T LE +HP F E+
Sbjct: 275 MRPTFLEIVNLLKDDLHPSFPEV 297
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHC 152
Y R +G GSFG ++ + +GE VAIK ++ +++ V +
Sbjct: 11 YRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGGVGIPSI 70
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ + D Y +V+E + ++ + ++ S++ L V L Q+ + YIH
Sbjct: 71 KWCGAEGD--YNVMVMELLGPSLEDL---FNFCSRKFSLKTVLLLADQMISRIEYIHSK- 124
Query: 213 GVCHRDIKPQNLL--VNPHTHQVKLCDFGSAK 242
HRD+KP N L + + V + DFG AK
Sbjct: 125 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 82/211 (38%), Gaps = 46/211 (21%)
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI--- 251
K Y + A+ IH G+ H D+KP N L+ +KL DFG A + ++
Sbjct: 158 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKD 214
Query: 252 SYICSRYYRAPELIFGATE----------YTTAIDIWSVGCVLAELLLGQPLFPGESGVD 301
S + + Y PE I + + D+WS+GC+L + G+ F
Sbjct: 215 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------Q 268
Query: 302 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEA--VDLVSRLLQ 359
Q++ I L ++PN+ E +FP I PE D++ L+
Sbjct: 269 QIINQISKLHA-------IIDPNH-EIEFPDI--------------PEKDLQDVLKCCLK 306
Query: 360 YSPNLRCTALEACIHPFFYELRDPNARLPNG 390
P R + E HP+ P ++ G
Sbjct: 307 RDPKQRISIPELLAHPYVQIQTHPVNQMAKG 337
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 82/211 (38%), Gaps = 46/211 (21%)
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI--- 251
K Y + A+ IH G+ H D+KP N L+ +KL DFG A + ++
Sbjct: 158 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKD 214
Query: 252 SYICSRYYRAPELIFGATE----------YTTAIDIWSVGCVLAELLLGQPLFPGESGVD 301
S + + Y PE I + + D+WS+GC+L + G+ F
Sbjct: 215 SQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------Q 268
Query: 302 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEA--VDLVSRLLQ 359
Q++ I L ++PN+ E +FP I PE D++ L+
Sbjct: 269 QIINQISKLHA-------IIDPNH-EIEFPDI--------------PEKDLQDVLKCCLK 306
Query: 360 YSPNLRCTALEACIHPFFYELRDPNARLPNG 390
P R + E HP+ P ++ G
Sbjct: 307 RDPKQRISIPELLAHPYVQIQTHPVNQMAKG 337
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 81/209 (38%), Gaps = 42/209 (20%)
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI--- 251
K Y + A+ IH G+ H D+KP N L+ +KL DFG A + ++
Sbjct: 158 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV--DGMLKLIDFGIANQMQPDTTSVVKD 214
Query: 252 SYICSRYYRAPELIFGATE----------YTTAIDIWSVGCVLAELLLGQPLFPGESGVD 301
S + + Y PE I + + D+WS+GC+L + G+ F
Sbjct: 215 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------Q 268
Query: 302 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYS 361
Q++ I L ++PN+ E +FP I + D++ L+
Sbjct: 269 QIINQISKLHA-------IIDPNH-EIEFPDIPE------------KDLQDVLKCCLKRD 308
Query: 362 PNLRCTALEACIHPFFYELRDPNARLPNG 390
P R + E HP+ P ++ G
Sbjct: 309 PKQRISIPELLAHPYVQIQTHPVNQMAKG 337
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 84/209 (40%), Gaps = 42/209 (20%)
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI--- 251
K Y + A+ IH G+ H D+KP N L+ +KL DFG A + ++
Sbjct: 130 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKD 186
Query: 252 SYICSRYYRAPELIFGATE----------YTTAIDIWSVGCVLAELLLGQPLFPGESGVD 301
S + + Y PE I + + D+WS+GC+L + G+ P + ++
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIIN 244
Query: 302 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYS 361
Q+ ++ ++ +PN+ E +FP I + D++ L+
Sbjct: 245 QISKLHAII-----------DPNH-EIEFPDIPE------------KDLQDVLKCCLKRD 280
Query: 362 PNLRCTALEACIHPFFYELRDPNARLPNG 390
P R + E HP+ P ++ G
Sbjct: 281 PKQRISIPELLAHPYVQIQTHPVNQMAKG 309
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 82/211 (38%), Gaps = 46/211 (21%)
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI--- 251
K Y + A+ IH G+ H D+KP N L+ +KL DFG A + ++
Sbjct: 111 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKD 167
Query: 252 SYICSRYYRAPELIFGATE----------YTTAIDIWSVGCVLAELLLGQPLFPGESGVD 301
S + + Y PE I + + D+WS+GC+L + G+ F
Sbjct: 168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------Q 221
Query: 302 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEA--VDLVSRLLQ 359
Q++ I L ++PN+ E +FP I PE D++ L+
Sbjct: 222 QIINQISKLHA-------IIDPNH-EIEFPDI--------------PEKDLQDVLKCCLK 259
Query: 360 YSPNLRCTALEACIHPFFYELRDPNARLPNG 390
P R + E HP+ P ++ G
Sbjct: 260 RDPKQRISIPELLAHPYVQIQTHPVNQMAKG 290
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 108/241 (44%), Gaps = 43/241 (17%)
Query: 77 VTTIGGRNGQP---KQTI--SYMAERVVGQGSFGIVFQAKCLETGETVAIK---KVLQDK 128
+TT G +G P ++TI + + + +G+G FG V++ K GE VA+K +
Sbjct: 23 MTTSGSGSGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERS 80
Query: 129 RYKNRELQTMRLLDHPNVVSLKHCFFSTTDKDE---LYLNLVLEFVPE-TVYRVAKHYSR 184
++ E+ +L H N++ F + +KD L LV ++ +++ Y+
Sbjct: 81 WFREAEIYQTVMLRHENILG----FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTV 136
Query: 185 ASQRMPLIYVKLYTYQICRALAYIH-------GGIGVCHRDIKPQNLLVNPHTHQVKLCD 237
+ M I + L T LA++H G + HRD+K +N+LV + + D
Sbjct: 137 TVEGM--IKLALST---ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG-TCCIAD 190
Query: 238 FG------SAKVLVKGEPNISYICSRYYRAPELIFGAT-----EYTTAIDIWSVGCVLAE 286
G SA + PN + ++ Y APE++ + E DI+++G V E
Sbjct: 191 LGLAVRHDSATDTIDIAPN-HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 249
Query: 287 L 287
+
Sbjct: 250 I 250
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 84/209 (40%), Gaps = 42/209 (20%)
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI--- 251
K Y + A+ IH G+ H D+KP N L+ +KL DFG A + ++
Sbjct: 110 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKD 166
Query: 252 SYICSRYYRAPELIFGATE----------YTTAIDIWSVGCVLAELLLGQPLFPGESGVD 301
S + + Y PE I + + D+WS+GC+L + G+ P + ++
Sbjct: 167 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIIN 224
Query: 302 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYS 361
Q+ ++ ++ +PN+ E +FP I + D++ L+
Sbjct: 225 QISKLHAII-----------DPNH-EIEFPDIPE------------KDLQDVLKCCLKRD 260
Query: 362 PNLRCTALEACIHPFFYELRDPNARLPNG 390
P R + E HP+ P ++ G
Sbjct: 261 PKQRISIPELLAHPYVQIQTHPVNQMAKG 289
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 84/209 (40%), Gaps = 42/209 (20%)
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI--- 251
K Y + A+ IH G+ H D+KP N L+ +KL DFG A + ++
Sbjct: 114 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV--DGMLKLIDFGIANQMQPDTTSVVKD 170
Query: 252 SYICSRYYRAPELIFGATE----------YTTAIDIWSVGCVLAELLLGQPLFPGESGVD 301
S + + Y PE I + + D+WS+GC+L + G+ P + ++
Sbjct: 171 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIIN 228
Query: 302 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYS 361
Q+ ++ ++ +PN+ E +FP I + D++ L+
Sbjct: 229 QISKLHAII-----------DPNH-EIEFPDIPE------------KDLQDVLKCCLKRD 264
Query: 362 PNLRCTALEACIHPFFYELRDPNARLPNG 390
P R + E HP+ P ++ G
Sbjct: 265 PKQRISIPELLAHPYVQIQTHPVNQMAKG 293
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 50/223 (22%)
Query: 99 VGQGSFGIVFQAKCL----ETGETVAIKKVLQD-----KRYKNRELQTMRLLDHPNVVSL 149
+G+G+FG VF A+C E + + K L++ ++ RE + + +L H ++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR- 107
Query: 150 KHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRM---------PLIYVKLYTY 199
FF + L +V E++ + R + + ++ + PL +L
Sbjct: 108 ---FFGVCTEGRPLL-MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 200 --QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
Q+ + Y+ G+ HRD+ +N LV VK+ DFG ++ + +
Sbjct: 164 ASQVAAGMVYL-AGLHFVHRDLATRNCLVG-QGLVVKIGDFGMSRDIYS---------TD 212
Query: 258 YYRA------------PELIFGATEYTTAIDIWSVGCVLAELL 288
YYR PE I ++TT D+WS G VL E+
Sbjct: 213 YYRVGGRTMLPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIF 254
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 89/219 (40%), Gaps = 25/219 (11%)
Query: 97 RVVGQGSFGIVFQAKCLE---TGETVAIKKVLQDKRYKNR------ELQTMRLLDHPNVV 147
+++G+G FG V + + T VA+K + D + E M+ HPNV+
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 148 SLKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSR---ASQRMPLIYVKLYTYQICRA 204
L + + ++L F+ YSR + +PL + + I
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 205 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 264
+ Y+ HRD+ +N ++ V + DFG +K + G+ Y R + P +
Sbjct: 160 MEYLSNR-NFLHRDLAARNCMLRDDM-TVCVADFGLSKKIYSGD---YYRQGRIAKMP-V 213
Query: 265 IFGATE------YTTAIDIWSVGCVLAELLL-GQPLFPG 296
+ A E YT+ D+W+ G + E+ G +PG
Sbjct: 214 KWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPG 252
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 8/152 (5%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHC 152
Y R +G GSFG ++ + GE VAIK ++ +++ V +
Sbjct: 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTI 70
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ + D Y +V+E + ++ + ++ S++ L V L Q+ + YIH
Sbjct: 71 RWCGAEGD--YNVMVMELLGPSLEDL---FNFCSRKFSLKTVLLLADQMISRIEYIHSK- 124
Query: 213 GVCHRDIKPQNLL--VNPHTHQVKLCDFGSAK 242
HRD+KP N L + + V + DFG AK
Sbjct: 125 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 83/209 (39%), Gaps = 42/209 (20%)
Query: 195 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI--- 251
K Y + A+ IH G+ H D+KP N L+ +KL DFG A + +
Sbjct: 130 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDXXXVVKD 186
Query: 252 SYICSRYYRAPELIFGATE----------YTTAIDIWSVGCVLAELLLGQPLFPGESGVD 301
S + + Y PE I + + D+WS+GC+L + G+ P + ++
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIIN 244
Query: 302 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYS 361
Q+ ++ ++ +PN+ E +FP I + D++ L+
Sbjct: 245 QISKLHAII-----------DPNH-EIEFPDIPE------------KDLQDVLKCCLKRD 280
Query: 362 PNLRCTALEACIHPFFYELRDPNARLPNG 390
P R + E HP+ P ++ G
Sbjct: 281 PKQRISIPELLAHPYVQIQTHPVNQMAKG 309
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 50/223 (22%)
Query: 99 VGQGSFGIVFQAKCL----ETGETVAIKKVLQD-----KRYKNRELQTMRLLDHPNVVSL 149
+G+G+FG VF A+C E + + K L++ ++ RE + + +L H ++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR- 78
Query: 150 KHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRM---------PLIYVKLYTY 199
FF + L +V E++ + R + + ++ + PL +L
Sbjct: 79 ---FFGVCTEGRPLL-MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 200 --QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
Q+ + Y+ G+ HRD+ +N LV VK+ DFG ++ + +
Sbjct: 135 ASQVAAGMVYL-AGLHFVHRDLATRNCLVG-QGLVVKIGDFGMSRDIYS---------TD 183
Query: 258 YYRA------------PELIFGATEYTTAIDIWSVGCVLAELL 288
YYR PE I ++TT D+WS G VL E+
Sbjct: 184 YYRVGGRTMLPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIF 225
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 8/152 (5%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHC 152
Y R +G GSFG ++ + GE VAIK ++ +++ V +
Sbjct: 9 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTI 68
Query: 153 FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 212
+ + D Y +V+E + ++ + ++ S++ L V L Q+ + YIH
Sbjct: 69 RWCGAEGD--YNVMVMELLGPSLEDL---FNFCSRKFSLKTVLLLADQMISRIEYIHSK- 122
Query: 213 GVCHRDIKPQNLL--VNPHTHQVKLCDFGSAK 242
HRD+KP N L + + V + DFG AK
Sbjct: 123 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 50/223 (22%)
Query: 99 VGQGSFGIVFQAKCL----ETGETVAIKKVLQD-----KRYKNRELQTMRLLDHPNVVSL 149
+G+G+FG VF A+C E + + K L++ ++ RE + + +L H ++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR- 84
Query: 150 KHCFFSTTDKDELYLNLVLEFVPE-TVYRVAKHYSRASQRM---------PLIYVKLYTY 199
FF + L +V E++ + R + + ++ + PL +L
Sbjct: 85 ---FFGVCTEGRPLL-MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 200 --QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR 257
Q+ + Y+ G+ HRD+ +N LV VK+ DFG ++ + +
Sbjct: 141 ASQVAAGMVYL-AGLHFVHRDLATRNCLVG-QGLVVKIGDFGMSRDIYS---------TD 189
Query: 258 YYRA------------PELIFGATEYTTAIDIWSVGCVLAELL 288
YYR PE I ++TT D+WS G VL E+
Sbjct: 190 YYRVGGRTMLPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIF 231
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 108/241 (44%), Gaps = 43/241 (17%)
Query: 77 VTTIGGRNGQP---KQTI--SYMAERVVGQGSFGIVFQAKCLETGETVAIK---KVLQDK 128
+TT G +G P ++TI + + + +G+G FG V++ K GE VA+K +
Sbjct: 10 MTTSGSGSGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERS 67
Query: 129 RYKNRELQTMRLLDHPNVVSLKHCFFSTTDKDE---LYLNLVLEFVPE-TVYRVAKHYSR 184
++ E+ +L H N++ F + +KD L LV ++ +++ Y+
Sbjct: 68 WFREAEIYQTVMLRHENILG----FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTV 123
Query: 185 ASQRMPLIYVKLYTYQICRALAYIH-------GGIGVCHRDIKPQNLLVNPHTHQVKLCD 237
+ M I + L T LA++H G + HRD+K +N+LV + + D
Sbjct: 124 TVEGM--IKLALST---ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG-TCCIAD 177
Query: 238 FG------SAKVLVKGEPNISYICSRYYRAPELIFGAT-----EYTTAIDIWSVGCVLAE 286
G SA + PN + ++ Y APE++ + E DI+++G V E
Sbjct: 178 LGLAVRHDSATDTIDIAPN-HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 236
Query: 287 L 287
+
Sbjct: 237 I 237
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 54/227 (23%)
Query: 96 ERVVGQGSFGIVFQAKCL----ETGETVAIKKVLQD-----KRYKNRELQTMRLLDHPNV 146
+R +G+G+FG VF A+C E + + K L+D ++ +RE + + L H ++
Sbjct: 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI 77
Query: 147 VSLKHCFFSTTDKDELYLNLVLEFV-------------PETVYRVAKHYSRASQRMPLIY 193
V + + D L + V E++ P+ V + + +++
Sbjct: 78 VKF---YGVCVEGDPLIM--VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 194 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 253
+ QI + Y+ HRD+ +N LV + VK+ DFG ++
Sbjct: 133 I---AQQIAAGMVYL-ASQHFVHRDLATRNCLVGENL-LVKIGDFGMSR---------DV 178
Query: 254 ICSRYYRA------------PELIFGATEYTTAIDIWSVGCVLAELL 288
+ YYR PE I ++TT D+WS+G VL E+
Sbjct: 179 YSTDYYRVGGHTMLPIRWMPPESIM-YRKFTTESDVWSLGVVLWEIF 224
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 91/217 (41%), Gaps = 20/217 (9%)
Query: 97 RVVGQGSFGIVFQAKCLETGET---VAIKKVLQDKRYKN------RELQTMRLLDHPNVV 147
R++G+G FG V +A+ + + VA+K + D + RE M+ DHP+V
Sbjct: 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVA 88
Query: 148 SLKHCFFSTTDKDELYLNLV-LEFVPET---VYRVAKHYSRASQRMPLIYVKLYTYQICR 203
L + K L + +V L F+ + +A +PL + + I
Sbjct: 89 KLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIAC 148
Query: 204 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YR 260
+ Y+ HRD+ +N ++ V + DFG ++ + G+ S+ +
Sbjct: 149 GMEYLSSR-NFIHRDLAARNCML-AEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWL 206
Query: 261 APELIFGATEYTTAIDIWSVGCVLAELLL-GQPLFPG 296
A E + YT D+W+ G + E++ GQ + G
Sbjct: 207 ALESL-ADNLYTVHSDVWAFGVTMWEIMTRGQTPYAG 242
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 38/189 (20%)
Query: 81 GGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLE--TGETVAIKKVLQ------DKRYKN 132
G + + T + +G G FG VF KC++ G AIK+ + D++
Sbjct: 1 GAMGMKSRYTTEFHELEKIGSGEFGSVF--KCVKRLDGCIYAIKRSKKPLAGSVDEQNAL 58
Query: 133 RELQTMRLL-DHPNVVSLKHCFFSTTDKDELYL--------NLVLEFVPETVYRVAKHYS 183
RE+ +L H +VV +FS +D+ L + + + E YR+ ++
Sbjct: 59 REVYAHAVLGQHSHVVR----YFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFK 113
Query: 184 RASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLV------NPHTHQVKLCD 237
A + L+ Q+ R L YIH + + H DIKP N+ + N + + D
Sbjct: 114 EAELKDLLL-------QVGRGLRYIH-SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165
Query: 238 FGSAKVLVK 246
+ S KV+ K
Sbjct: 166 WASNKVMFK 174
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 38/171 (22%)
Query: 99 VGQGSFGIVFQAKCLE--TGETVAIKKVLQ------DKRYKNRELQTMRLL-DHPNVVSL 149
+G G FG VF KC++ G AIK+ + D++ RE+ +L H +VV
Sbjct: 15 IGSGEFGSVF--KCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR- 71
Query: 150 KHCFFSTTDKDELYL--------NLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQI 201
+FS +D+ L + + + E YR+ ++ A + L+ Q+
Sbjct: 72 ---YFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKDLLL-------QV 120
Query: 202 CRALAYIHGGIGVCHRDIKPQNLLV------NPHTHQVKLCDFGSAKVLVK 246
R L YIH + + H DIKP N+ + N + + D+ S KV+ K
Sbjct: 121 GRGLRYIHS-MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 170
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 38/171 (22%)
Query: 99 VGQGSFGIVFQAKCLE--TGETVAIKKVLQ------DKRYKNRELQTMRLL-DHPNVVSL 149
+G G FG VF KC++ G AIK+ + D++ RE+ +L H +VV
Sbjct: 17 IGSGEFGSVF--KCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR- 73
Query: 150 KHCFFSTTDKDELYL--------NLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQI 201
+FS +D+ L + + + E YR+ ++ A + L+ Q+
Sbjct: 74 ---YFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKDLLL-------QV 122
Query: 202 CRALAYIHGGIGVCHRDIKPQNLLV------NPHTHQVKLCDFGSAKVLVK 246
R L YIH + + H DIKP N+ + N + + D+ S KV+ K
Sbjct: 123 GRGLRYIHS-MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 172
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 38/171 (22%)
Query: 99 VGQGSFGIVFQAKCLE--TGETVAIKKVLQ------DKRYKNRELQTMRLL-DHPNVVSL 149
+G G FG VF KC++ G AIK+ + D++ RE+ +L H +VV
Sbjct: 17 IGSGEFGSVF--KCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR- 73
Query: 150 KHCFFSTTDKDELYL--------NLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQI 201
+FS +D+ L + + + E YR+ ++ A + L+ Q+
Sbjct: 74 ---YFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKDLLL-------QV 122
Query: 202 CRALAYIHGGIGVCHRDIKPQNLLV------NPHTHQVKLCDFGSAKVLVK 246
R L YIH + + H DIKP N+ + N + + D+ S KV+ K
Sbjct: 123 GRGLRYIHS-MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 172
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 87/219 (39%), Gaps = 48/219 (21%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVL---QDKRYKNRELQTMRLLDHPNVVSLKHCFFS 155
VG+G +G V++ GE VA+K + ++ EL +L H N++ F
Sbjct: 16 VGKGRYGEVWRGSW--QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILG-----FI 68
Query: 156 TTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQ----------ICRAL 205
+D + + L + HY Y++L T I L
Sbjct: 69 ASDMTSRHSSTQLWLIT--------HYHEMGSLYD--YLQLTTLDTVSCLRIVLSIASGL 118
Query: 206 AYIH-------GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY----- 253
A++H G + HRD+K +N+LV + Q + D G A + + +
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG-QCCIADLGLAVMHSQSTNQLDVGNNPR 177
Query: 254 ICSRYYRAPELI-----FGATEYTTAIDIWSVGCVLAEL 287
+ ++ Y APE++ + +DIW+ G VL E+
Sbjct: 178 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 87/219 (39%), Gaps = 48/219 (21%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIK---KVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS 155
VG+G +G V++ GE VA+K + ++ EL +L H N++ F
Sbjct: 16 VGKGRYGEVWRGSW--QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILG-----FI 68
Query: 156 TTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQ----------ICRAL 205
+D + + L + HY Y++L T I L
Sbjct: 69 ASDMTSRHSSTQLWLIT--------HYHEMGSLYD--YLQLTTLDTVSCLRIVLSIASGL 118
Query: 206 AYIH-------GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY----- 253
A++H G + HRD+K +N+LV + Q + D G A + + +
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG-QCCIADLGLAVMHSQSTNQLDVGNNPR 177
Query: 254 ICSRYYRAPELI-----FGATEYTTAIDIWSVGCVLAEL 287
+ ++ Y APE++ + +DIW+ G VL E+
Sbjct: 178 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 87/219 (39%), Gaps = 48/219 (21%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIK---KVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS 155
VG+G +G V++ GE VA+K + ++ EL +L H N++ F
Sbjct: 45 VGKGRYGEVWRGSW--QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILG-----FI 97
Query: 156 TTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQ----------ICRAL 205
+D + + L + HY Y++L T I L
Sbjct: 98 ASDMTSRHSSTQLWLIT--------HYHEMGSLYD--YLQLTTLDTVSCLRIVLSIASGL 147
Query: 206 AYIH-------GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY----- 253
A++H G + HRD+K +N+LV + Q + D G A + + +
Sbjct: 148 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG-QCCIADLGLAVMHSQSTNQLDVGNNPR 206
Query: 254 ICSRYYRAPELI-----FGATEYTTAIDIWSVGCVLAEL 287
+ ++ Y APE++ + +DIW+ G VL E+
Sbjct: 207 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 38/214 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIK---KVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS 155
+G+G FG V++ K GE VA+K + ++ E+ +L H N++ F +
Sbjct: 17 IGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG----FIA 70
Query: 156 TTDKDE---LYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH-- 209
+KD L LV ++ +++ Y+ + M I + L T LA++H
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALST---ASGLAHLHME 125
Query: 210 -----GGIGVCHRDIKPQNLLVNPHTHQVKLCDFG------SAKVLVKGEPNISYICSRY 258
G + HRD+K +N+LV + + D G SA + PN + ++
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNG-TCCIADLGLAVRHDSATDTIDIAPN-HRVGTKR 183
Query: 259 YRAPELIFGAT-----EYTTAIDIWSVGCVLAEL 287
Y APE++ + E DI+++G V E+
Sbjct: 184 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 38/214 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIK---KVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS 155
+G+G FG V++ K GE VA+K + ++ E+ +L H N++ F +
Sbjct: 11 IGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG----FIA 64
Query: 156 TTDKDE---LYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH-- 209
+KD L LV ++ +++ Y+ + M I + L T LA++H
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALST---ASGLAHLHME 119
Query: 210 -----GGIGVCHRDIKPQNLLVNPHTHQVKLCDFG------SAKVLVKGEPNISYICSRY 258
G + HRD+K +N+LV + + D G SA + PN + ++
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNG-TCCIADLGLAVRHDSATDTIDIAPN-HRVGTKR 177
Query: 259 YRAPELIFGAT-----EYTTAIDIWSVGCVLAEL 287
Y APE++ + E DI+++G V E+
Sbjct: 178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 38/214 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIK---KVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS 155
+G+G FG V++ K GE VA+K + ++ E+ +L H N++ F +
Sbjct: 14 IGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG----FIA 67
Query: 156 TTDKDE---LYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH-- 209
+KD L LV ++ +++ Y+ + M I + L T LA++H
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALST---ASGLAHLHME 122
Query: 210 -----GGIGVCHRDIKPQNLLVNPHTHQVKLCDFG------SAKVLVKGEPNISYICSRY 258
G + HRD+K +N+LV + + D G SA + PN + ++
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNG-TCCIADLGLAVRHDSATDTIDIAPN-HRVGTKR 180
Query: 259 YRAPELIFGAT-----EYTTAIDIWSVGCVLAEL 287
Y APE++ + E DI+++G V E+
Sbjct: 181 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 38/214 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIK---KVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS 155
+G+G FG V++ K GE VA+K + ++ E+ +L H N++ F +
Sbjct: 12 IGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG----FIA 65
Query: 156 TTDKDE---LYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH-- 209
+KD L LV ++ +++ Y+ + M I + L T LA++H
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALST---ASGLAHLHME 120
Query: 210 -----GGIGVCHRDIKPQNLLVNPHTHQVKLCDFG------SAKVLVKGEPNISYICSRY 258
G + HRD+K +N+LV + + D G SA + PN + ++
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNG-TCCIADLGLAVRHDSATDTIDIAPN-HRVGTKR 178
Query: 259 YRAPELIFGAT-----EYTTAIDIWSVGCVLAEL 287
Y APE++ + E DI+++G V E+
Sbjct: 179 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 14/158 (8%)
Query: 91 ISYMAERVVGQGSFGIVFQAKCLETGETVAIK--KVLQDKRYKNRELQTMRLLDHPNVVS 148
+ Y R +G+GSFG++F+ L + VAIK D E +T +LL +
Sbjct: 9 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIP 68
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
+ F + L ++L+ + + + + +S + V + Q+ + I
Sbjct: 69 NVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKT-------VAMAAKQMLARVQSI 121
Query: 209 HGGIGVCHRDIKPQNLLV----NPHTHQVKLCDFGSAK 242
H + +RDIKP N L+ + + + + + DFG K
Sbjct: 122 HEK-SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 158
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 14/158 (8%)
Query: 91 ISYMAERVVGQGSFGIVFQAKCLETGETVAIK--KVLQDKRYKNRELQTMRLLDHPNVVS 148
+ Y R +G+GSFG++F+ L + VAIK D E +T +LL +
Sbjct: 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIP 69
Query: 149 LKHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYI 208
+ F + L ++L+ + + + + +S + V + Q+ + I
Sbjct: 70 NVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKT-------VAMAAKQMLARVQSI 122
Query: 209 HGGIGVCHRDIKPQNLLV----NPHTHQVKLCDFGSAK 242
H + +RDIKP N L+ + + + + + DFG K
Sbjct: 123 HEK-SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 46/226 (20%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGE---TVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 151
R +GQGSFG+V++ AK + E VAIK V + + R + L+ +V+ +
Sbjct: 31 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER----IEFLNEASVMKEFN 86
Query: 152 C-----FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIY------VKLYTYQ 200
C + + L ++ + + A P++ + +
Sbjct: 87 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGE 146
Query: 201 ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR 260
I +AY++ V HRD+ +N +V VK+ DFG + + + + YYR
Sbjct: 147 IADGMAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIYE---------TDYYR 195
Query: 261 ------------APELIFGATEYTTAIDIWSVGCVLAEL--LLGQP 292
+PE + +TT D+WS G VL E+ L QP
Sbjct: 196 KGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQP 240
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 26/107 (24%)
Query: 200 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYY 259
+I +AY++ V HRD+ +N +V VK+ DFG + + + + YY
Sbjct: 146 EIADGMAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIYE---------TDYY 194
Query: 260 R------------APELIFGATEYTTAIDIWSVGCVLAEL--LLGQP 292
R +PE + +TT D+WS G VL E+ L QP
Sbjct: 195 RKGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQP 240
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 46/226 (20%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGE---TVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 151
R +GQGSFG+V++ AK + E VAIK V + + R + L+ +V+ +
Sbjct: 21 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER----IEFLNEASVMKEFN 76
Query: 152 C-----FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIY------VKLYTYQ 200
C + + L ++ + + A P++ + +
Sbjct: 77 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGE 136
Query: 201 ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR 260
I +AY++ V HRD+ +N +V VK+ DFG + + + + YYR
Sbjct: 137 IADGMAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIYE---------TDYYR 185
Query: 261 ------------APELIFGATEYTTAIDIWSVGCVLAEL--LLGQP 292
+PE + +TT D+WS G VL E+ L QP
Sbjct: 186 KGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQP 230
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 26/107 (24%)
Query: 200 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYY 259
+I +AY++ V HRD+ +N +V VK+ DFG + + + + YY
Sbjct: 139 EIADGMAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIYE---------TDYY 187
Query: 260 R------------APELIFGATEYTTAIDIWSVGCVLAEL--LLGQP 292
R +PE + +TT D+WS G VL E+ L QP
Sbjct: 188 RKGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQP 233
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 38/216 (17%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGE---TVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 151
R +GQGSFG+V++ AK + E VAIK V + + R + L+ +V+ +
Sbjct: 16 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER----IEFLNEASVMKEFN 71
Query: 152 CFFSTTDKDELYLNLVLEFVPETVYRVA------KHYSRA----SQRMPLIY------VK 195
C L +V + P V K Y R+ + P++ +
Sbjct: 72 CHHVVR-----LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 126
Query: 196 LYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP----NI 251
+I +AY++ V HRD+ +N +V VK+ DFG + + + +
Sbjct: 127 QMAGEIADGMAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIXETDXXRKGGK 184
Query: 252 SYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAEL 287
+ R+ L G +TT D+WS G VL E+
Sbjct: 185 GLLPVRWMSPESLKDGV--FTTYSDVWSFGVVLWEI 218
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 26/107 (24%)
Query: 200 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYY 259
+I +AY++ V HRD+ +N +V VK+ DFG + + + + YY
Sbjct: 139 EIADGMAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIYE---------TDYY 187
Query: 260 R------------APELIFGATEYTTAIDIWSVGCVLAEL--LLGQP 292
R +PE + +TT D+WS G VL E+ L QP
Sbjct: 188 RKGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQP 233
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 26/107 (24%)
Query: 200 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYY 259
+I +AY++ V HRD+ +N +V VK+ DFG + + + + YY
Sbjct: 140 EIADGMAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIYE---------TDYY 188
Query: 260 R------------APELIFGATEYTTAIDIWSVGCVLAEL--LLGQP 292
R +PE + +TT D+WS G VL E+ L QP
Sbjct: 189 RKGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQP 234
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 26/107 (24%)
Query: 200 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYY 259
+I +AY++ V HRD+ +N +V VK+ DFG + + + + YY
Sbjct: 137 EIADGMAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIYE---------TDYY 185
Query: 260 R------------APELIFGATEYTTAIDIWSVGCVLAEL--LLGQP 292
R +PE + +TT D+WS G VL E+ L QP
Sbjct: 186 RKGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQP 231
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 24/100 (24%)
Query: 200 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYY 259
+I +AY++ V HRD+ +N +V VK+ DFG + + + + YY
Sbjct: 133 EIADGMAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIYE---------TDYY 181
Query: 260 R------------APELIFGATEYTTAIDIWSVGCVLAEL 287
R +PE + +TT D+WS G VL E+
Sbjct: 182 RKGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEI 220
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 26/107 (24%)
Query: 200 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYY 259
+I +AY++ V HRD+ +N +V VK+ DFG + + + + YY
Sbjct: 168 EIADGMAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIYETD---------YY 216
Query: 260 R------------APELIFGATEYTTAIDIWSVGCVLAEL--LLGQP 292
R +PE + +TT D+WS G VL E+ L QP
Sbjct: 217 RKGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQP 262
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 200 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP----NISYIC 255
+I +AY++ V HRD+ +N +V VK+ DFG + + + + +
Sbjct: 140 EIADGMAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 197
Query: 256 SRYYRAPELIFGATEYTTAIDIWSVGCVLAEL 287
R+ L G +TT D+WS G VL E+
Sbjct: 198 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEI 227
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT--MRLLDHPNVVSLKHCFFST 156
+G G+FG + K L T E VAIK R L+ + L + +F
Sbjct: 8 IGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSAGEGLPQVYYFGP 67
Query: 157 TDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCH 216
K Y +VLE + ++ + + + L V + Q+ + Y+H + +
Sbjct: 68 XGK---YNAMVLELLGPSLEDL---FDLCDRTFTLKTVLMIAIQLLSRMEYVHSK-NLIY 120
Query: 217 RDIKPQNLLV----NPHTHQVKLCDFGSAKVLVKGE 248
RD+KP+N L+ N H + + DFG AK + E
Sbjct: 121 RDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPE 156
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 12/162 (7%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 151
++ + +G G+FG + K L T E VAIK R L+ +
Sbjct: 5 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSATEGVPQ 64
Query: 152 C-FFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHG 210
+F K Y +VLE + ++ + + + L V + Q+ + Y+H
Sbjct: 65 VYYFGPXGK---YNAMVLELLGPSLEDL---FDLCDRTFTLKTVLMIAIQLITRMEYVHT 118
Query: 211 GIGVCHRDIKPQNLLVN-PHT---HQVKLCDFGSAKVLVKGE 248
+ +RD+KP+N LV P T H + + DFG AK + E
Sbjct: 119 K-SLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPE 159
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 24/100 (24%)
Query: 200 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYY 259
+I +AY++ V HRD+ +N V VK+ DFG + + + + YY
Sbjct: 133 EIADGMAYLNANKFV-HRDLAARNCXV-AEDFTVKIGDFGMTRDIYE---------TDYY 181
Query: 260 R------------APELIFGATEYTTAIDIWSVGCVLAEL 287
R +PE + +TT D+WS G VL E+
Sbjct: 182 RKGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEI 220
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 90/211 (42%), Gaps = 32/211 (15%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVL---QDKRYKNRELQTMRLLDHPNVVSLKHCFFS 155
+G+G +G V+ K GE VA+K + ++ E+ L+ H N++
Sbjct: 45 IGKGRYGEVWMGKW--RGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIK 102
Query: 156 TTDK-DELYLNLVLEFVPE-TVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH---- 209
T +LYL + ++ ++Y K + ++ M +KL Y L ++H
Sbjct: 103 GTGSWTQLYL--ITDYHENGSLYDYLKSTTLDAKSM----LKL-AYSSVSGLCHLHTEIF 155
Query: 210 ---GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE-----PNISYICSRYYRA 261
G + HRD+K +N+LV + + D G A + P + + ++ Y
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNG-TCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMP 214
Query: 262 PELI---FGATEYTTAI--DIWSVGCVLAEL 287
PE++ + + I D++S G +L E+
Sbjct: 215 PEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 14/163 (8%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT--MRLLDHPNVVSL 149
++ + +G G+FG + K L T E VAIK R L+ + L + +
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQ 69
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
+ +F K Y +VLE + ++ + + + L V + Q+ + Y+H
Sbjct: 70 VY-YFGPCGK---YNAMVLELLGPSLEDL---FDLCDRTFSLKTVLMIAIQLISRMEYVH 122
Query: 210 GGIGVCHRDIKPQNLLV----NPHTHQVKLCDFGSAKVLVKGE 248
+ +RD+KP+N L+ N + + DFG AK + E
Sbjct: 123 SK-NLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPE 164
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 69/163 (42%), Gaps = 14/163 (8%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT--MRLLDHPNVVSL 149
++ + +G G+FG + K L T E VAIK R L+ + L + +
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQ 69
Query: 150 KHCFFSTTDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIH 209
+ +F K Y +VLE + ++ + + + L V + Q+ + Y+H
Sbjct: 70 VY-YFGPCGK---YNAMVLELLGPSLEDL---FDLCDRTFSLKTVLMIAIQLISRMEYVH 122
Query: 210 GGIGVCHRDIKPQNLLV----NPHTHQVKLCDFGSAKVLVKGE 248
+ +RD+KP+N L+ N + + DF AK + E
Sbjct: 123 SK-NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 164
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 14/156 (8%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT--MRLLDHPNVVSLKHCFFST 156
+G G+FG + K L T E VAIK R L+ + L + + + +F
Sbjct: 38 IGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVY-YFGP 96
Query: 157 TDKDELYLNLVLEFVPETVYRVAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCH 216
K Y +VLE + ++ + + + L V + Q+ + Y+H + +
Sbjct: 97 CGK---YNAMVLELLGPSLEDL---FDLCDRTFSLKTVLMIAIQLISRMEYVHSK-NLIY 149
Query: 217 RDIKPQNLLV----NPHTHQVKLCDFGSAKVLVKGE 248
RD+KP+N L+ N + + DF AK + E
Sbjct: 150 RDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 185
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 178 VAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVN-PHTHQVKLC 236
+ K Y ++R V + +I L YIH V H DIK NLL+N + QV L
Sbjct: 138 LQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYV-HGDIKASNLLLNYKNPDQVYLV 196
Query: 237 DFGSA 241
D+G A
Sbjct: 197 DYGLA 201
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 178 VAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVN-PHTHQVKLC 236
+ K Y ++R V + +I L YIH V H DIK NLL+N + QV L
Sbjct: 138 LQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYV-HGDIKASNLLLNYKNPDQVYLV 196
Query: 237 DFGSA 241
D+G A
Sbjct: 197 DYGLA 201
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 178 VAKHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVN-PHTHQVKLC 236
+ K Y ++R V + +I L YIH V H DIK NLL+N + QV L
Sbjct: 138 LQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYV-HGDIKASNLLLNYKNPDQVYLV 196
Query: 237 DFGSA 241
D+G A
Sbjct: 197 DYGLA 201
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,826,489
Number of Sequences: 62578
Number of extensions: 550801
Number of successful extensions: 4608
Number of sequences better than 100.0: 962
Number of HSP's better than 100.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 363
Number of HSP's that attempted gapping in prelim test: 1544
Number of HSP's gapped (non-prelim): 1110
length of query: 429
length of database: 14,973,337
effective HSP length: 102
effective length of query: 327
effective length of database: 8,590,381
effective search space: 2809054587
effective search space used: 2809054587
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)