BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014177
(429 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5QKR8|PSEB_CAMJJ UDP-N-acetylglucosamine 4,6-dehydratase (inverting)
OS=Campylobacter jejuni subsp. jejuni serotype O:23/36
(strain 81-176) GN=pseB PE=3 SV=1
Length = 334
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 41 RVLVLGGTGRVGGS-TAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNS-EFAEVNIYN 98
+L+ GGTG G + T V L P+ +I++ SR+ K M S N + ++ +
Sbjct: 6 NILITGGTGSFGKTYTKVLLENYKPN-KIIIYSRDELKQFEMSSIFNSNCMRYFIGDVRD 64
Query: 99 EGSLLMALRDVDLVVHAAG----PFQQAPKCTVLEAAIETKTAYIDVC 142
+ L +A+RDVD V+HAA P + ++ I ID C
Sbjct: 65 KERLSVAMRDVDFVIHAAAMKHVPVAEYNPMECIKTNIHGAQNVIDAC 112
>sp|Q0P8W4|PSEB_CAMJE UDP-N-acetylglucosamine 4,6-dehydratase (inverting)
OS=Campylobacter jejuni subsp. jejuni serotype O:2
(strain NCTC 11168) GN=pseB PE=1 SV=1
Length = 334
Score = 40.8 bits (94), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 33 FQMKNRNARVLVLGGTGRVGGS-TAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNS-E 90
F KN +L+ GGTG G + T V L P+ +I++ SR+ K M S
Sbjct: 2 FNKKN----ILITGGTGSFGKTYTKVLLENYKPN-KIIIYSRDELKQFEMASVFNAPCMR 56
Query: 91 FAEVNIYNEGSLLMALRDVDLVVHAAG----PFQQAPKCTVLEAAIETKTAYIDVC 142
+ ++ ++ L A+RDVD V+HAA P + ++ I ID C
Sbjct: 57 YFIGDVRDKERLSAAMRDVDFVIHAAAMKHVPIAEYNPMECIKTNIHGAQNVIDAC 112
>sp|P09147|GALE_ECOLI UDP-glucose 4-epimerase OS=Escherichia coli (strain K12) GN=galE
PE=1 SV=1
Length = 338
Score = 40.0 bits (92), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGA-AMVSTL-GKNSEFAEVNIYN 98
RVLV GG+G +G T V L + D+ I+ N ++ ++ L GK+ F E +I N
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN 61
Query: 99 EGSLLMALRD--VDLVVHAAG 117
E + L D +D V+H AG
Sbjct: 62 EALMTEILHDHAIDTVIHFAG 82
>sp|P22715|GALE_SALTY UDP-glucose 4-epimerase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=galE PE=3 SV=2
Length = 338
Score = 40.0 bits (92), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGA-AMVSTL-GKNSEFAEVNIYN 98
RVLV GG+G +G T V L + D+ I+ N ++ ++ L GK+ F E +I N
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN 61
Query: 99 EGSLLMALRD--VDLVVHAAG 117
E + L D +D V+H AG
Sbjct: 62 EALITEILHDHAIDTVIHFAG 82
>sp|Q56093|GALE_SALTI UDP-glucose 4-epimerase OS=Salmonella typhi GN=galE PE=3 SV=2
Length = 338
Score = 40.0 bits (92), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGA-AMVSTL-GKNSEFAEVNIYN 98
RVLV GG+G +G T V L + D+ I+ N ++ ++ L GK+ F E +I N
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN 61
Query: 99 EGSLLMALRD--VDLVVHAAG 117
E + L D +D V+H AG
Sbjct: 62 EALITEILHDHAIDTVIHFAG 82
>sp|Q54LW0|PADA_DICDI Prestalk A differentiation protein A OS=Dictyostelium discoideum
GN=padA PE=3 SV=2
Length = 301
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGS 101
+LV GGTG VG +L ++ I VG R+++K + GKNS F + + +
Sbjct: 12 ILVTGGTGVVGRQVVKSLELREKNINIRVGGRDQDKCNQL--GFGKNSTFTRFDFMDPTT 69
Query: 102 LLMALRDVDLVVHAAGPFQQAPK 124
+L VD V A P P+
Sbjct: 70 WDKSLEGVDRVFLIALPMDPTPE 92
>sp|A8GWP0|CAPD_RICB8 UDP-glucose 4-epimerase OS=Rickettsia bellii (strain OSU 85-389)
GN=capD PE=3 SV=1
Length = 341
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 42 VLVLGGTGRVGGSTAVALSK--LCPDL-QIVVGSRNREKGAAMVSTLGK-NSEFAEVNIY 97
+L+ GGTG G + K + D+ +I + SR+ +K M L +F ++
Sbjct: 7 LLITGGTGSFGNAVLSRFLKNDIIKDIKEIRIFSRDEKKQEDMRIALNNPKIKFYIGDVR 66
Query: 98 NEGSLLMALRDVDLVVHAAGPFQQAPKC 125
N S+ A++DVD V HAA +Q P C
Sbjct: 67 NYNSIDDAMKDVDYVFHAAA-LKQVPTC 93
>sp|P52580|IFRH_MAIZE Isoflavone reductase homolog IRL OS=Zea mays GN=IRL PE=2 SV=1
Length = 309
Score = 37.0 bits (84), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVV---GSRNREKGAAMVSTLGKNSEF 91
M + +++LV+GGTG +G A ++L +V + K A + S
Sbjct: 1 MASEKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTL 60
Query: 92 AEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIE 133
+ ++Y++ SL+ A++ D+V+ G Q A + +++A E
Sbjct: 61 LKGDLYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKE 102
>sp|A4IKL5|LDH_GEOTN L-lactate dehydrogenase OS=Geobacillus thermodenitrificans (strain
NG80-2) GN=ldh PE=3 SV=1
Length = 317
Score = 35.4 bits (80), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Query: 35 MKNRNARVLVLGGTGRVGGSTAVALSK--LCPDLQIVVGSRNREKGAAMVSTLGKNSEFA 92
MKN + + GTG VG S A AL + ++ ++ + N+ KG AM GK
Sbjct: 1 MKNGGGNRVAVVGTGFVGSSYAFALMNQGIADEIVLIDANENKAKGDAMDLNHGKVFAPN 60
Query: 93 EVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLE 129
NI+ RD DLVV AG Q P T L+
Sbjct: 61 PTNIWY--GDYHDCRDADLVVICAGA-NQKPGETRLD 94
>sp|P62049|LDH3_BACC1 L-lactate dehydrogenase 3 OS=Bacillus cereus (strain ATCC 10987)
GN=ldh3 PE=3 SV=1
Length = 316
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 38 RNARVLVLGGTGRVGGSTAVAL--SKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVN 95
RN R + + GTG VG S A ++ +C +L ++ + R G AM + N
Sbjct: 3 RNTRKIAIIGTGLVGSSCAYSIVNQGICEELLLIDINHERAVGEAMDLSHCINFTNTRTK 62
Query: 96 IYNEGSLLMALRDVDLVVHAAGPFQQAPK 124
+Y GS +D+D+V+ AGP APK
Sbjct: 63 VY-AGS-YEDCKDMDIVIITAGP---APK 86
>sp|A8GN21|CAPD_RICAH UDP-glucose 4-epimerase OS=Rickettsia akari (strain Hartford)
GN=capD PE=3 SV=1
Length = 341
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 42 VLVLGGTGRVGGSTAVAL--SKLCPDL-QIVVGSRNREKGAAMVSTLGK-NSEFAEVNIY 97
+++ GGTG G + S + D+ +I + SR+ +K M L +F ++
Sbjct: 7 LMITGGTGSFGNAVLSRFLKSDIINDIKEIRIFSRDEKKQEDMRIALSNPKLKFYIGDVR 66
Query: 98 NEGSLLMALRDVDLVVHAAGPFQQAPKC----------------TVLEAAIETKTAYIDV 141
N S+ A+R VD V HAA +Q P C VL AAI K A + V
Sbjct: 67 NYKSIDEAMRGVDYVFHAAA-LKQVPTCEFYPMEAINTNVLGAENVLSAAINNKVAKVIV 125
Query: 142 --CDDTIY 147
D +Y
Sbjct: 126 LSTDKAVY 133
>sp|Q51576|Y3106_PSEAE Uncharacterized oxidoreductase PA3106 OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=PA3106 PE=3 SV=1
Length = 255
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYN 98
N +V ++ G R G ++ + Q+V+ +RE+GA + LG+++ F +++
Sbjct: 9 NGKVALVTGAAR-GIGLGISAWLIAEGWQVVLADNDRERGARVAEALGEHAWFVAMDVAQ 67
Query: 99 EGSLLMALRDV 109
EG + M++ +V
Sbjct: 68 EGQVAMSVAEV 78
>sp|P70117|LG3BP_MESAU Galectin-3-binding protein OS=Mesocricetus auratus GN=LGALS3BP PE=2
SV=1
Length = 578
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 311 QQLVQLFDPVVRAFDGIAGERVSMRVDLECTD-GRNTVGIFSHRRLSVSVGTAIAAFVLA 369
+L+ +P +A + G V MRVD EC R+ + F RR+ V++ + LA
Sbjct: 172 HKLILNTNPEAQALWQVVGSSVIMRVDAECMPVVRDFLRYFYSRRIEVTMSSVKCLHKLA 231
Query: 370 VLEGATQ 376
GATQ
Sbjct: 232 SAYGATQ 238
>sp|Q8SKU2|TIC62_PEA Protein TIC 62, chloroplastic OS=Pisum sativum GN=TIC62 PE=1 SV=2
Length = 534
Score = 33.9 bits (76), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 15 IMASATSATKETVLDGAHFQMKNRNAR-VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR 73
I A A+ +TK + +G + +++ V V G TG+VG T L KL ++ G R
Sbjct: 63 IRAQASGSTKSSTAEGIPEKTDSKDDNLVFVAGATGKVGSRTVRELIKL--GFKVRAGVR 120
Query: 74 NREKGAAMVSTLGK 87
N +K A+V ++ +
Sbjct: 121 NAQKAGALVQSVKQ 134
>sp|Q5L2S0|LDH_GEOKA L-lactate dehydrogenase OS=Geobacillus kaustophilus (strain HTA426)
GN=ldh PE=3 SV=1
Length = 317
Score = 33.9 bits (76), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 35 MKN-RNARVLVLGGTGRVGGSTAVALSK--LCPDLQIVVGSRNREKGAAMVSTLGKNSEF 91
MKN R RV V+G TG VG S A AL + ++ ++ + N+ +G AM GK
Sbjct: 1 MKNGRGNRVAVVG-TGFVGASYAFALMNQGIADEIVLIDANENKAEGDAMDFNHGKVFAP 59
Query: 92 AEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLE 129
+I++ RD DLVV AG Q P T L+
Sbjct: 60 KPADIWH--GDYDDCRDADLVVICAGA-NQKPGETRLD 94
>sp|P20151|KLK2_HUMAN Kallikrein-2 OS=Homo sapiens GN=KLK2 PE=2 SV=1
Length = 261
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 67/164 (40%), Gaps = 38/164 (23%)
Query: 255 KDVFLLNLPE---VRSAREVLGVPTVSARFGTAPFFWNWGMVTMQRLFPAEYLRDRSKVQ 311
D+ LL L E + +VLG+PT GT + WG + P E+LR RS
Sbjct: 119 HDLMLLRLSEPAKITDVVKVLGLPTQEPALGTTCYASGWGSIE-----PEEFLRPRS--L 171
Query: 312 QLVQLF----DPVVRAFDGIAGERVS--MRVDLECTDGRNTVGIFSHRRLSVSVGTAIAA 365
Q V L D RA+ E+V+ M T G++T G G +
Sbjct: 172 QCVSLHLLSNDMCARAYS----EKVTEFMLCAGLWTGGKDTCG-----------GDSGGP 216
Query: 366 FVL-AVLEGATQPGVWFPEE---PEGIAIEAREVLLKRASQGTI 405
V VL+G T W PE PE A+ + V ++ + TI
Sbjct: 217 LVCNGVLQGITS---WGPEPCALPEKPAVYTKVVHYRKWIKDTI 257
>sp|A0Q1F0|ARGC_CLONN N-acetyl-gamma-glutamyl-phosphate reductase OS=Clostridium novyi
(strain NT) GN=argC PE=3 SV=1
Length = 345
Score = 33.5 bits (75), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEG 100
+V ++G TG +G V L K+ P+++IV S G + S F E N
Sbjct: 3 KVGIIGSTGYIG-QQLVWLLKIHPNVEIVFLSSYNYAGYSFNSVYNNYKGFVETTCINIK 61
Query: 101 SLLMALRDVDLVVHA 115
+ L+DVD+V A
Sbjct: 62 EVKTRLKDVDIVFMA 76
>sp|P52579|IFRH_TOBAC Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1
Length = 310
Score = 33.5 bits (75), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 37 NRNARVLVLGGTGRVGGSTAVALSKL-CPDLQIVVGS--RNREKGAAMVSTLGKNSEFAE 93
+ +++L++GGTG +G +K P ++ S +N EK + +
Sbjct: 4 SEKSKILIIGGTGYIGKYLVETSAKSGHPTFALIRESTLKNPEKSKLIDTFKSYGVTLLF 63
Query: 94 VNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIE 133
+I N+ SLL A++ VD+V+ G Q + +++A E
Sbjct: 64 GDISNQESLLKAIKQVDVVISTVGGQQFTDQVNIIKAIKE 103
>sp|P10655|LDH_BACCA L-lactate dehydrogenase OS=Bacillus caldotenax GN=ldh PE=3 SV=1
Length = 317
Score = 33.5 bits (75), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 35 MKN-RNARVLVLGGTGRVGGSTAVALSK--LCPDLQIVVGSRNREKGAAMVSTLGKNSEF 91
MKN R RV V+G TG VG S A AL + ++ ++ + N+ +G AM GK
Sbjct: 1 MKNGRGNRVAVVG-TGFVGASYAFALMNQGIADEIVLIDANENKAEGDAMDLNHGKVFAP 59
Query: 92 AEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLE 129
+I++ RD DLVV AG Q P T L+
Sbjct: 60 KPADIWH--GDYDDCRDADLVVICAGA-NQKPGETRLD 94
>sp|Q07797|LG3BP_MOUSE Galectin-3-binding protein OS=Mus musculus GN=Lgals3bp PE=1 SV=1
Length = 577
Score = 33.5 bits (75), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 318 DPVVRAFDGIAGERVSMRVDLECTD-GRNTVGIFSHRRLSVSVGTAIAAFVLAVLEGATQ 376
+P +A + G V MRVD EC R+ + F RR+ VS+ + LA GAT+
Sbjct: 179 NPEAQALWQVVGSSVIMRVDAECMPVVRDFLRYFYSRRIEVSMSSVKCLHKLASAYGATE 238
>sp|O70513|LG3BP_RAT Galectin-3-binding protein OS=Rattus norvegicus GN=Lgals3bp PE=1
SV=2
Length = 574
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 318 DPVVRAFDGIAGERVSMRVDLECTD-GRNTVGIFSHRRLSVSVGTAIAAFVLAVLEGATQ 376
+P +A + G V MRVD EC R+ + F RR+ VS+ + LA GAT+
Sbjct: 179 NPEAQALWQVVGSSVIMRVDAECMPVVRDFLRYFYSRRIEVSMSSVKCLHKLASAYGATE 238
>sp|O59711|LYS9_SCHPO Saccharopine dehydrogenase [NADP(+), L-glutamate-forming]
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=lys9 PE=3 SV=1
Length = 450
Score = 33.5 bits (75), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 43 LVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSL 102
++L G+G V T LS+ + I V R K A ++ + NS+ +++ +E +L
Sbjct: 4 ILLLGSGFVAHPTLEYLSRR-KENNITVACRTLSKAEAFINGI-PNSKAIALDVNDEAAL 61
Query: 103 LMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAAN 162
A+ + DL + + P+ TV++AAI+ VC + + + ++ AI A
Sbjct: 62 EKAVSEHDLTI-SLIPYTY--HATVMKAAIKHGK---HVCTTSYVNPKMAELEEAAIKAG 115
Query: 163 IPAITTGGIYPGVSNVMAAELVR 185
+ G+ PG+ ++ A + +
Sbjct: 116 SICMNEIGVDPGIDHLYAIKTIE 138
>sp|C5D5V2|LDH_GEOSW L-lactate dehydrogenase OS=Geobacillus sp. (strain WCH70) GN=ldh
PE=3 SV=1
Length = 319
Score = 33.5 bits (75), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
Query: 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFA-- 92
MK + + L GTG VG S A AL ++V+ N+EK V L FA
Sbjct: 1 MKRQCMNRVALIGTGFVGASYAFALMNQGIADELVLIDVNKEKAEGDVMDLNHGKVFAPK 60
Query: 93 EVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYS 148
+NI++ +D DLVV AG Q P T L+ + + + D + S
Sbjct: 61 PMNIWHGD--YQDCQDADLVVICAGA-NQKPGETRLDLVDKNMNIFKTIVDSVMRS 113
>sp|P45602|GALE_KLEPN UDP-glucose 4-epimerase (Fragment) OS=Klebsiella pneumoniae GN=galE
PE=3 SV=1
Length = 139
Score = 33.5 bits (75), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN-REKGAAMVSTL-GKNSEFAEVNIYN 98
+VLV GG+G +G T V L + ++ I+ N + + ++ L GK + F E +I N
Sbjct: 2 KVLVTGGSGYIGSHTCVQLLQRGHEVVILDNLCNSKRRILPVIERLGGKEATFIEGDIRN 61
Query: 99 EGSLLMALRD--VDLVVHAAG 117
E + L D ++ V+H AG
Sbjct: 62 EARMTEILHDHAIEAVIHFAG 82
>sp|A7Z152|LDH_BACA2 L-lactate dehydrogenase OS=Bacillus amyloliquefaciens (strain
FZB42) GN=ldh PE=3 SV=1
Length = 317
Score = 33.5 bits (75), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Query: 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEV 94
M N + L G G VG S A AL ++V+ NREK V L FA
Sbjct: 1 MMNERVNKVALIGAGFVGSSYAFALINQGITDELVIIDVNREKAMGDVMDLNHGKAFAPH 60
Query: 95 NIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLE 129
+ +D D+V AG Q P T LE
Sbjct: 61 PVKTSYGTYEDCKDADIVCICAGA-NQKPGETRLE 94
>sp|Q5QUF4|DXR_IDILO 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Idiomarina
loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR)
GN=dxr PE=3 SV=1
Length = 397
Score = 33.5 bits (75), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%)
Query: 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEG 100
R+ VLG TG +G +T +S+ D Q+ + + + A + N ++A + YN
Sbjct: 3 RITVLGATGSIGQNTLNVVSRHPDDFQVFALTAHSQISAMAELCVKHNPQYAVMGSYNAA 62
Query: 101 SLLMAL 106
+ L AL
Sbjct: 63 AELKAL 68
>sp|Q9Y7X5|UGE1_SCHPO UDP-glucose 4-epimerase uge1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=uge1 PE=1 SV=1
Length = 355
Score = 33.1 bits (74), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN-REKGAAMVSTL-GKNSEFAEVNIYNE 99
VLV GG G +G T V L + D+ IV N R + + L GK F +V++ +E
Sbjct: 9 VLVTGGAGYIGSHTCVVLLEKGYDVVIVDNLCNSRVEAVHRIEKLTGKKVIFHQVDLLDE 68
Query: 100 GSL--LMALRDVDLVVHAAG 117
+L + A +++ V+H AG
Sbjct: 69 PALDKVFANQNISAVIHFAG 88
>sp|E1U332|ALL12_OLEEU Isoflavone reductase-like protein OS=Olea europaea PE=1 SV=1
Length = 308
Score = 33.1 bits (74), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 41 RVLVLGGTGRVGGSTAVALSKL-CPDLQIVVGSRNREKGAAMVSTLGKNSEFAEV--NIY 97
++L++GGTG +G A +K P + S + + KNS + ++Y
Sbjct: 6 KILIIGGTGYIGKFIVEASAKSEHPTFALARESTISDPVKGKIIQGFKNSGVTILTGDLY 65
Query: 98 NEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIE 133
+ SL+ A++ VD+V+ G Q A + ++ A E
Sbjct: 66 DHESLVKAIKQVDVVISTVGQLQLADQVKIIAAIKE 101
>sp|P52661|GBPR_AZOBR HTH-type transcriptional regulator GbpR OS=Azospirillum brasilense
GN=gbpR PE=1 SV=1
Length = 342
Score = 33.1 bits (74), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 356 SVSVGTAIAAFVLAVLEGATQPGVWFPEEPEGIAIEAREVLLKRASQGTINFVMNKAPWM 415
SVS+GT +A V V+ T P+ +A+E +VL +R QG ++F + + P
Sbjct: 107 SVSIGTVMAPAVELVVPVITTLTRDHPDLKIAVAVETSDVLAERVRQGVMDFAIGRLPDH 166
Query: 416 VE 417
V+
Sbjct: 167 VD 168
>sp|A2QCU8|SCONB_ASPNC Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
GN=sconB PE=3 SV=1
Length = 670
Score = 32.7 bits (73), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 30/67 (44%)
Query: 13 TAIMASATSATKETVLDGAHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGS 72
T+I + +E D + Q+K N + VG S A L+K PD +GS
Sbjct: 8 TSIFGGPAESAEEIDADADNSQLKPHNRSNVTATSAKLVGKSVAPFLAKHVPDQYAPLGS 67
Query: 73 RNREKGA 79
+NRE A
Sbjct: 68 QNREPAA 74
>sp|P13714|LDH_BACSU L-lactate dehydrogenase OS=Bacillus subtilis (strain 168) GN=ldh
PE=1 SV=3
Length = 320
Score = 32.7 bits (73), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Query: 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNI 96
N++ + L G G VG S A AL ++VV N+EK V L FA +
Sbjct: 2 NKHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPV 61
Query: 97 YNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLE 129
+D D+V AG Q P T LE
Sbjct: 62 KTSYGTYEDCKDADIVCICAGA-NQKPGETRLE 93
>sp|A8LQI0|PSUG_DINSH Pseudouridine-5'-phosphate glycosidase OS=Dinoroseobacter shibae
(strain DFL 12) GN=psuG PE=3 SV=1
Length = 305
Score = 32.7 bits (73), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 24/155 (15%)
Query: 180 AAELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFL--LLGEEVVA------YNK 231
A EL +A+ + + R Y + AG T+ AT + + G V A +K
Sbjct: 75 ADELEALAKVKDALKISRADIGYAISQGKSAGTTVAATMIVAQMAGIRVFATGGIGGVHK 134
Query: 232 GEEITLEPYSGMLSVDFGKGIGRKDVF--------LLNLPEVRSAREVLGVPTVSARFGT 283
G E + + +S D + +GR DV +L++P+ E GV V R T
Sbjct: 135 GVETSFD-----ISADLTE-LGRTDVIVVAAGAKAILDVPKTLEVLETQGVSVVGYRTDT 188
Query: 284 APFFWNWG--MVTMQRLFPAEYLRDRSKVQQLVQL 316
P FW G + RL A + + KV+ ++L
Sbjct: 189 LPAFWTSGSDLDIPLRLDSAAEISEFQKVRDALRL 223
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 150,009,190
Number of Sequences: 539616
Number of extensions: 6223066
Number of successful extensions: 15747
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 15735
Number of HSP's gapped (non-prelim): 50
length of query: 429
length of database: 191,569,459
effective HSP length: 120
effective length of query: 309
effective length of database: 126,815,539
effective search space: 39186001551
effective search space used: 39186001551
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)