Query 014177
Match_columns 429
No_of_seqs 284 out of 3614
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 02:35:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014177.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014177hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1748 LYS9 Saccharopine dehy 100.0 1.9E-45 4.2E-50 360.2 30.7 351 39-419 1-380 (389)
2 PF03435 Saccharop_dh: Sacchar 100.0 4.8E-38 1.1E-42 316.7 26.6 347 42-405 1-383 (386)
3 PLN02819 lysine-ketoglutarate 100.0 1.3E-28 2.8E-33 267.4 29.3 348 37-407 567-1037(1042)
4 COG3268 Uncharacterized conser 99.9 6.3E-26 1.4E-30 212.6 22.5 354 39-410 6-380 (382)
5 COG1088 RfbB dTDP-D-glucose 4, 99.8 1.8E-18 3.8E-23 160.8 13.9 191 40-235 1-215 (340)
6 KOG2733 Uncharacterized membra 99.8 2.3E-18 5.1E-23 163.0 12.2 132 40-172 6-147 (423)
7 PRK15181 Vi polysaccharide bio 99.7 1.7E-16 3.7E-21 157.9 16.1 189 37-235 13-232 (348)
8 COG1087 GalE UDP-glucose 4-epi 99.7 1.2E-16 2.6E-21 149.4 12.3 158 40-210 1-178 (329)
9 PLN02572 UDP-sulfoquinovose sy 99.7 1E-15 2.2E-20 156.7 17.2 207 26-235 33-308 (442)
10 KOG1429 dTDP-glucose 4-6-dehyd 99.7 8.1E-16 1.8E-20 142.0 12.7 205 16-237 11-237 (350)
11 KOG1502 Flavonol reductase/cin 99.7 2.3E-15 5E-20 144.3 15.3 165 38-210 5-200 (327)
12 PRK11908 NAD-dependent epimera 99.6 3E-15 6.5E-20 148.8 15.8 192 39-234 1-219 (347)
13 PLN02427 UDP-apiose/xylose syn 99.6 4.9E-15 1.1E-19 149.4 15.0 171 37-209 12-217 (386)
14 PRK08125 bifunctional UDP-gluc 99.6 1.4E-14 3E-19 155.8 16.0 195 37-235 313-534 (660)
15 PLN02214 cinnamoyl-CoA reducta 99.6 3.6E-14 7.9E-19 140.8 13.1 170 37-210 8-197 (342)
16 PLN02896 cinnamyl-alcohol dehy 99.5 5.1E-14 1.1E-18 140.3 14.1 167 38-210 9-212 (353)
17 PF01073 3Beta_HSD: 3-beta hyd 99.5 4.6E-14 9.9E-19 136.0 12.8 164 43-210 1-187 (280)
18 PRK10217 dTDP-glucose 4,6-dehy 99.5 5.7E-14 1.2E-18 139.9 14.0 187 39-235 1-223 (355)
19 TIGR03589 PseB UDP-N-acetylglu 99.5 2.7E-13 5.8E-18 133.6 18.3 152 37-209 2-173 (324)
20 TIGR01472 gmd GDP-mannose 4,6- 99.5 2.9E-14 6.3E-19 141.5 11.6 160 40-209 1-191 (343)
21 PLN02695 GDP-D-mannose-3',5'-e 99.5 6.7E-14 1.5E-18 140.4 14.0 187 38-235 20-235 (370)
22 PLN02650 dihydroflavonol-4-red 99.5 6.4E-14 1.4E-18 139.5 13.7 168 39-210 5-199 (351)
23 PLN02166 dTDP-glucose 4,6-dehy 99.5 9.1E-14 2E-18 141.9 14.9 187 38-234 119-327 (436)
24 PLN00198 anthocyanidin reducta 99.5 9.6E-14 2.1E-18 137.4 14.3 171 37-210 7-204 (338)
25 PLN02206 UDP-glucuronate decar 99.5 1.3E-13 2.7E-18 141.2 14.8 188 38-235 118-327 (442)
26 PLN02260 probable rhamnose bio 99.5 2.1E-13 4.5E-18 147.2 16.8 195 37-235 4-222 (668)
27 PLN02653 GDP-mannose 4,6-dehyd 99.5 9.8E-14 2.1E-18 137.5 12.4 163 37-209 4-197 (340)
28 TIGR02622 CDP_4_6_dhtase CDP-g 99.5 2.3E-13 4.9E-18 135.4 14.7 163 37-209 2-194 (349)
29 KOG0172 Lysine-ketoglutarate r 99.5 1.3E-13 2.8E-18 132.6 12.2 346 39-405 2-438 (445)
30 PRK09987 dTDP-4-dehydrorhamnos 99.5 4E-14 8.6E-19 137.9 9.0 161 40-231 1-181 (299)
31 PLN02686 cinnamoyl-CoA reducta 99.5 3.3E-13 7.2E-18 135.2 15.2 171 36-210 50-252 (367)
32 PLN02662 cinnamyl-alcohol dehy 99.5 1.6E-13 3.4E-18 134.7 12.5 168 38-210 3-198 (322)
33 KOG1371 UDP-glucose 4-epimeras 99.5 1.4E-13 3E-18 130.3 11.4 163 39-210 2-189 (343)
34 PF01370 Epimerase: NAD depend 99.5 2.3E-13 5E-18 127.1 12.2 181 42-234 1-205 (236)
35 PLN02989 cinnamyl-alcohol dehy 99.5 1.9E-13 4.2E-18 134.4 11.9 164 39-210 5-200 (325)
36 PLN02986 cinnamyl-alcohol dehy 99.5 2.3E-13 5E-18 133.7 12.2 168 38-210 4-199 (322)
37 PF02719 Polysacc_synt_2: Poly 99.5 3.5E-13 7.6E-18 128.2 12.8 146 42-209 1-176 (293)
38 COG1086 Predicted nucleoside-d 99.4 1.6E-12 3.5E-17 131.4 15.4 153 35-209 246-424 (588)
39 TIGR01181 dTDP_gluc_dehyt dTDP 99.4 1.5E-12 3.3E-17 126.9 14.6 186 41-234 1-212 (317)
40 PRK10084 dTDP-glucose 4,6 dehy 99.4 2.4E-12 5.2E-17 128.1 15.2 189 40-234 1-229 (352)
41 COG0451 WcaG Nucleoside-diphos 99.4 1.2E-12 2.6E-17 127.6 12.6 159 41-212 2-180 (314)
42 COG4221 Short-chain alcohol de 99.4 3.5E-12 7.5E-17 117.0 12.3 157 37-200 4-178 (246)
43 COG0300 DltE Short-chain dehyd 99.4 2.9E-12 6.2E-17 120.6 11.7 82 36-119 3-95 (265)
44 PLN02240 UDP-glucose 4-epimera 99.4 4.6E-12 1E-16 125.9 13.5 163 36-208 2-191 (352)
45 COG1091 RfbD dTDP-4-dehydrorha 99.3 5.5E-12 1.2E-16 119.4 10.8 149 40-223 1-167 (281)
46 PLN02583 cinnamoyl-CoA reducta 99.3 2.2E-11 4.8E-16 118.5 14.4 167 39-209 6-198 (297)
47 PRK10675 UDP-galactose-4-epime 99.3 2.2E-11 4.7E-16 120.4 14.5 160 40-208 1-184 (338)
48 TIGR03466 HpnA hopanoid-associ 99.3 8.6E-12 1.9E-16 122.4 11.1 160 40-210 1-177 (328)
49 PRK11150 rfaD ADP-L-glycero-D- 99.3 4.2E-12 9.1E-17 124.0 8.3 152 42-210 2-176 (308)
50 KOG1205 Predicted dehydrogenas 99.3 2.9E-11 6.2E-16 114.7 13.0 165 31-200 4-190 (282)
51 PF04321 RmlD_sub_bind: RmlD s 99.3 6.5E-12 1.4E-16 121.5 8.7 158 40-231 1-178 (286)
52 CHL00194 ycf39 Ycf39; Provisio 99.3 2.9E-11 6.3E-16 118.7 13.0 99 40-143 1-110 (317)
53 PRK06194 hypothetical protein; 99.3 3.1E-11 6.7E-16 116.5 12.4 82 37-120 4-95 (287)
54 KOG0747 Putative NAD+-dependen 99.3 1.7E-11 3.7E-16 113.7 9.6 192 38-236 5-221 (331)
55 PLN02657 3,8-divinyl protochlo 99.3 1.9E-10 4.1E-15 116.2 17.0 104 37-143 58-182 (390)
56 KOG1430 C-3 sterol dehydrogena 99.3 6E-11 1.3E-15 116.2 12.9 169 37-210 2-189 (361)
57 PRK06482 short chain dehydroge 99.2 1.2E-10 2.6E-15 111.7 14.6 79 39-119 2-87 (276)
58 PRK05717 oxidoreductase; Valid 99.2 8.2E-11 1.8E-15 111.6 12.4 81 37-119 8-95 (255)
59 PLN02253 xanthoxin dehydrogena 99.2 1.3E-10 2.9E-15 111.7 13.0 82 36-119 15-105 (280)
60 TIGR03325 BphB_TodD cis-2,3-di 99.2 4.3E-10 9.3E-15 107.2 15.6 81 37-119 3-90 (262)
61 PLN02725 GDP-4-keto-6-deoxyman 99.2 7.9E-11 1.7E-15 114.5 10.7 145 43-209 1-165 (306)
62 PRK06200 2,3-dihydroxy-2,3-dih 99.2 2.7E-10 5.9E-15 108.5 13.8 152 37-193 4-176 (263)
63 PLN02996 fatty acyl-CoA reduct 99.2 6.9E-11 1.5E-15 122.6 9.7 173 35-210 7-270 (491)
64 PF13460 NAD_binding_10: NADH( 99.2 2E-10 4.4E-15 103.2 11.4 95 42-143 1-98 (183)
65 PRK05854 short chain dehydroge 99.2 3.2E-10 7E-15 111.2 13.4 83 35-119 10-104 (313)
66 PRK06500 short chain dehydroge 99.2 5.4E-10 1.2E-14 105.2 14.5 81 37-119 4-91 (249)
67 PRK07067 sorbitol dehydrogenas 99.2 2.5E-10 5.4E-15 108.4 12.1 81 37-119 4-91 (257)
68 PRK07201 short chain dehydroge 99.2 2E-10 4.4E-15 123.7 12.5 162 40-210 1-184 (657)
69 PRK06180 short chain dehydroge 99.2 7.6E-10 1.6E-14 106.4 15.0 80 38-119 3-89 (277)
70 TIGR01179 galE UDP-glucose-4-e 99.2 2.9E-10 6.2E-15 111.3 12.3 158 41-208 1-180 (328)
71 PRK08263 short chain dehydroge 99.2 2.2E-10 4.9E-15 110.0 11.2 81 37-119 1-88 (275)
72 TIGR02197 heptose_epim ADP-L-g 99.1 1.8E-10 4E-15 112.4 10.6 155 42-209 1-175 (314)
73 PF07993 NAD_binding_4: Male s 99.1 1.3E-10 2.9E-15 110.1 9.3 162 44-206 1-200 (249)
74 TIGR01214 rmlD dTDP-4-dehydror 99.1 9.8E-11 2.1E-15 113.0 8.4 137 41-209 1-155 (287)
75 PRK07814 short chain dehydroge 99.1 5.1E-10 1.1E-14 106.7 13.3 81 37-119 8-98 (263)
76 PRK07890 short chain dehydroge 99.1 2.4E-10 5.3E-15 108.3 10.5 81 37-119 3-93 (258)
77 PRK07774 short chain dehydroge 99.1 9.8E-10 2.1E-14 103.6 14.4 81 37-119 4-94 (250)
78 PLN03209 translocon at the inn 99.1 5.8E-10 1.3E-14 115.4 13.7 105 37-143 78-208 (576)
79 PLN00016 RNA-binding protein; 99.1 8.7E-10 1.9E-14 111.0 14.9 156 37-211 50-218 (378)
80 PRK05865 hypothetical protein; 99.1 8.2E-10 1.8E-14 119.8 15.5 96 40-143 1-103 (854)
81 PRK08265 short chain dehydroge 99.1 3.6E-10 7.7E-15 107.7 11.3 81 37-119 4-91 (261)
82 PRK05866 short chain dehydroge 99.1 3.2E-09 6.9E-14 103.1 17.9 83 35-119 36-128 (293)
83 PRK13394 3-hydroxybutyrate deh 99.1 4.8E-10 1E-14 106.5 11.9 81 37-119 5-95 (262)
84 PRK07024 short chain dehydroge 99.1 2.8E-09 6E-14 101.3 17.0 79 39-119 2-89 (257)
85 PRK06182 short chain dehydroge 99.1 5.7E-10 1.2E-14 107.0 12.4 77 38-119 2-85 (273)
86 PRK06138 short chain dehydroge 99.1 4.1E-10 9E-15 106.2 11.2 82 36-119 2-92 (252)
87 PRK07231 fabG 3-ketoacyl-(acyl 99.1 1.8E-09 3.8E-14 101.8 15.2 82 36-119 2-92 (251)
88 PRK09291 short chain dehydroge 99.1 5.9E-10 1.3E-14 105.6 11.9 79 39-119 2-84 (257)
89 PRK10538 malonic semialdehyde 99.1 3E-09 6.5E-14 100.5 16.7 78 40-119 1-85 (248)
90 PRK08589 short chain dehydroge 99.1 7.8E-10 1.7E-14 106.1 12.9 80 37-119 4-93 (272)
91 PRK05867 short chain dehydroge 99.1 6.7E-10 1.5E-14 105.2 12.2 82 37-120 7-98 (253)
92 PRK08339 short chain dehydroge 99.1 8.2E-10 1.8E-14 105.5 12.8 82 36-119 5-96 (263)
93 PRK05876 short chain dehydroge 99.1 6.3E-10 1.4E-14 107.0 12.0 81 37-119 4-94 (275)
94 PRK07326 short chain dehydroge 99.1 7.9E-10 1.7E-14 103.4 12.0 82 37-120 4-94 (237)
95 PRK08219 short chain dehydroge 99.1 3.3E-09 7.2E-14 98.3 15.9 78 38-119 2-82 (227)
96 PRK12823 benD 1,6-dihydroxycyc 99.1 1E-09 2.2E-14 104.3 12.5 79 37-118 6-94 (260)
97 COG3967 DltE Short-chain dehyd 99.1 2E-09 4.3E-14 95.8 13.1 82 36-120 2-90 (245)
98 PRK06196 oxidoreductase; Provi 99.1 2.5E-09 5.5E-14 104.8 15.6 81 36-119 23-110 (315)
99 PRK09135 pteridine reductase; 99.1 9.7E-10 2.1E-14 103.4 12.0 81 37-119 4-96 (249)
100 PRK07825 short chain dehydroge 99.1 7.8E-10 1.7E-14 106.0 11.6 81 36-119 2-89 (273)
101 PRK07063 short chain dehydroge 99.1 1.1E-09 2.5E-14 104.0 12.3 81 37-119 5-97 (260)
102 PRK12746 short chain dehydroge 99.1 7.2E-09 1.6E-13 98.0 17.7 82 36-119 3-101 (254)
103 PRK07453 protochlorophyllide o 99.1 5.2E-10 1.1E-14 110.0 10.2 80 37-118 4-93 (322)
104 PRK07806 short chain dehydroge 99.1 2.6E-09 5.6E-14 100.7 14.6 148 37-200 4-178 (248)
105 PRK12481 2-deoxy-D-gluconate 3 99.1 2.1E-09 4.5E-14 101.9 13.9 83 36-120 5-95 (251)
106 PRK08267 short chain dehydroge 99.1 7.1E-10 1.5E-14 105.4 10.8 79 39-119 1-88 (260)
107 PRK05872 short chain dehydroge 99.1 6.4E-10 1.4E-14 108.1 10.6 82 36-119 6-96 (296)
108 PRK07478 short chain dehydroge 99.1 1.5E-09 3.2E-14 102.9 12.8 81 37-119 4-94 (254)
109 PRK06197 short chain dehydroge 99.1 1.1E-09 2.3E-14 107.0 11.8 81 36-118 13-105 (306)
110 TIGR01746 Thioester-redct thio 99.1 1.2E-09 2.7E-14 108.4 12.4 164 41-208 1-198 (367)
111 PRK05993 short chain dehydroge 99.1 4.4E-09 9.5E-14 101.2 15.8 77 38-119 3-87 (277)
112 PLN02778 3,5-epimerase/4-reduc 99.1 3.7E-10 8.1E-15 109.9 8.4 129 38-200 8-163 (298)
113 TIGR01832 kduD 2-deoxy-D-gluco 99.1 1.4E-09 3E-14 102.5 12.1 81 37-119 3-91 (248)
114 PRK12429 3-hydroxybutyrate deh 99.1 2.4E-09 5.3E-14 101.3 13.6 81 37-119 2-92 (258)
115 PRK07109 short chain dehydroge 99.1 1.4E-09 3E-14 107.7 12.2 82 36-119 5-96 (334)
116 PRK06139 short chain dehydroge 99.1 1.6E-09 3.5E-14 107.0 12.6 81 37-119 5-95 (330)
117 PRK09186 flagellin modificatio 99.0 1.7E-09 3.7E-14 102.4 12.2 80 37-118 2-93 (256)
118 PRK05693 short chain dehydroge 99.0 1.1E-09 2.4E-14 105.0 10.7 76 39-119 1-83 (274)
119 PLN00141 Tic62-NAD(P)-related 99.0 2.5E-09 5.3E-14 101.4 12.9 107 35-144 13-133 (251)
120 PRK05875 short chain dehydroge 99.0 1.3E-08 2.7E-13 97.7 17.9 81 37-119 5-97 (276)
121 PRK08213 gluconate 5-dehydroge 99.0 6.7E-09 1.5E-13 98.6 15.7 80 37-118 10-99 (259)
122 PRK08643 acetoin reductase; Va 99.0 1.8E-09 3.9E-14 102.3 11.7 79 39-119 2-90 (256)
123 PRK07523 gluconate 5-dehydroge 99.0 1.3E-09 2.8E-14 103.3 10.7 81 37-119 8-98 (255)
124 PRK06701 short chain dehydroge 99.0 2.6E-09 5.5E-14 103.6 12.8 90 28-119 35-135 (290)
125 PRK08340 glucose-1-dehydrogena 99.0 2.6E-09 5.6E-14 101.6 12.6 78 40-119 1-87 (259)
126 PRK06101 short chain dehydroge 99.0 3.6E-09 7.8E-14 99.5 13.3 77 39-118 1-81 (240)
127 PRK12826 3-ketoacyl-(acyl-carr 99.0 1.2E-08 2.6E-13 96.0 16.8 82 37-120 4-95 (251)
128 PRK06949 short chain dehydroge 99.0 3E-09 6.5E-14 100.8 12.7 81 37-119 7-97 (258)
129 PRK08277 D-mannonate oxidoredu 99.0 2.9E-09 6.3E-14 102.3 12.5 81 37-119 8-98 (278)
130 PRK06935 2-deoxy-D-gluconate 3 99.0 3.4E-09 7.3E-14 100.7 12.7 80 37-119 13-102 (258)
131 PRK12384 sorbitol-6-phosphate 99.0 2.3E-09 5E-14 101.8 11.5 79 39-119 2-92 (259)
132 PRK08278 short chain dehydroge 99.0 2.9E-09 6.2E-14 102.3 12.2 81 37-119 4-101 (273)
133 PRK07856 short chain dehydroge 99.0 1.7E-09 3.7E-14 102.4 10.2 77 36-119 3-86 (252)
134 PRK07097 gluconate 5-dehydroge 99.0 2.5E-09 5.5E-14 102.0 11.4 83 36-120 7-99 (265)
135 PRK07062 short chain dehydroge 99.0 3E-09 6.6E-14 101.4 11.9 82 36-119 5-98 (265)
136 PRK08177 short chain dehydroge 99.0 6E-09 1.3E-13 96.9 13.6 77 39-119 1-82 (225)
137 TIGR03206 benzo_BadH 2-hydroxy 99.0 3.2E-09 7E-14 100.0 11.9 81 37-119 1-91 (250)
138 PRK08063 enoyl-(acyl carrier p 99.0 2E-09 4.4E-14 101.5 10.4 81 37-119 2-93 (250)
139 PRK07576 short chain dehydroge 99.0 1.6E-09 3.5E-14 103.5 9.8 81 37-119 7-97 (264)
140 PRK06179 short chain dehydroge 99.0 1.2E-09 2.5E-14 104.5 8.8 75 38-119 3-84 (270)
141 PRK07666 fabG 3-ketoacyl-(acyl 99.0 2.2E-09 4.7E-14 100.7 10.4 81 37-119 5-95 (239)
142 PRK07775 short chain dehydroge 99.0 3.3E-09 7.2E-14 101.8 11.9 81 37-119 8-98 (274)
143 PRK12829 short chain dehydroge 99.0 1.9E-09 4.1E-14 102.5 10.1 81 37-119 9-97 (264)
144 PRK12936 3-ketoacyl-(acyl-carr 99.0 4.3E-09 9.2E-14 98.8 12.4 81 37-119 4-91 (245)
145 PRK06398 aldose dehydrogenase; 99.0 3E-09 6.5E-14 101.2 11.4 73 36-118 3-82 (258)
146 PRK07074 short chain dehydroge 99.0 3.1E-09 6.8E-14 100.7 11.5 79 39-119 2-88 (257)
147 PRK06123 short chain dehydroge 99.0 1.2E-08 2.5E-13 96.1 15.2 79 39-119 2-91 (248)
148 PRK05884 short chain dehydroge 99.0 5.6E-09 1.2E-13 97.2 12.8 147 40-192 1-159 (223)
149 PRK08085 gluconate 5-dehydroge 99.0 3.6E-09 7.8E-14 100.2 11.6 81 37-119 7-97 (254)
150 PRK07035 short chain dehydroge 99.0 3.8E-08 8.3E-13 93.0 18.6 81 36-118 5-95 (252)
151 PRK09134 short chain dehydroge 99.0 3.5E-09 7.6E-14 100.6 11.5 80 38-119 8-98 (258)
152 PRK07060 short chain dehydroge 99.0 3.4E-09 7.4E-14 99.5 11.3 79 37-119 7-88 (245)
153 COG3320 Putative dehydrogenase 99.0 5.7E-09 1.2E-13 101.5 12.9 167 40-211 1-204 (382)
154 PRK12744 short chain dehydroge 99.0 5E-09 1.1E-13 99.5 12.4 82 36-119 5-100 (257)
155 PRK06181 short chain dehydroge 99.0 4.1E-09 8.9E-14 100.3 11.8 80 39-120 1-90 (263)
156 PRK07454 short chain dehydroge 99.0 3.3E-09 7.2E-14 99.5 11.0 81 38-120 5-95 (241)
157 PRK07102 short chain dehydroge 99.0 3.3E-09 7.1E-14 99.8 10.9 79 39-119 1-87 (243)
158 TIGR01963 PHB_DH 3-hydroxybuty 99.0 9E-09 1.9E-13 97.2 13.9 79 39-119 1-89 (255)
159 PRK12745 3-ketoacyl-(acyl-carr 99.0 1.2E-08 2.6E-13 96.6 14.7 79 39-119 2-91 (256)
160 PRK09242 tropinone reductase; 99.0 5.8E-09 1.3E-13 98.9 12.6 81 37-119 7-99 (257)
161 PRK08264 short chain dehydroge 99.0 2.7E-09 5.8E-14 99.9 10.1 76 37-118 4-83 (238)
162 PRK09072 short chain dehydroge 99.0 4.8E-09 1E-13 100.0 11.9 82 36-119 2-91 (263)
163 PRK12825 fabG 3-ketoacyl-(acyl 99.0 2.9E-08 6.3E-13 93.0 17.1 81 37-119 4-95 (249)
164 PRK08416 7-alpha-hydroxysteroi 99.0 5.6E-09 1.2E-13 99.4 12.3 83 35-119 4-98 (260)
165 PRK06914 short chain dehydroge 99.0 2.8E-09 6E-14 102.5 10.3 81 37-120 1-93 (280)
166 PRK06172 short chain dehydroge 99.0 5.9E-09 1.3E-13 98.6 12.2 81 37-119 5-95 (253)
167 PRK06114 short chain dehydroge 99.0 1E-08 2.3E-13 97.1 13.9 83 36-120 5-98 (254)
168 PF05368 NmrA: NmrA-like famil 99.0 3.8E-09 8.2E-14 98.9 10.7 97 42-143 1-102 (233)
169 PLN02260 probable rhamnose bio 99.0 4.4E-09 9.5E-14 113.7 12.6 136 37-207 378-540 (668)
170 PRK08642 fabG 3-ketoacyl-(acyl 99.0 5.6E-09 1.2E-13 98.5 11.9 80 37-118 3-91 (253)
171 PRK08628 short chain dehydroge 99.0 3.3E-09 7.2E-14 100.6 10.3 80 36-118 4-93 (258)
172 PRK06079 enoyl-(acyl carrier p 99.0 1.9E-08 4.2E-13 95.3 15.3 80 37-119 5-94 (252)
173 PRK06484 short chain dehydroge 99.0 8.4E-09 1.8E-13 108.2 14.1 81 37-119 267-354 (520)
174 PRK12827 short chain dehydroge 99.0 1.6E-08 3.4E-13 95.1 14.6 82 37-120 4-99 (249)
175 PRK05786 fabG 3-ketoacyl-(acyl 99.0 1.9E-08 4.1E-13 94.1 15.1 82 37-120 3-93 (238)
176 PRK07985 oxidoreductase; Provi 99.0 9.1E-09 2E-13 100.0 13.3 81 36-118 46-138 (294)
177 PRK06128 oxidoreductase; Provi 99.0 1.6E-08 3.4E-13 98.5 14.9 81 37-119 53-145 (300)
178 PRK05653 fabG 3-ketoacyl-(acyl 98.9 6.4E-09 1.4E-13 97.4 11.7 82 36-119 2-93 (246)
179 PRK05855 short chain dehydroge 98.9 4.7E-09 1E-13 111.1 12.0 84 35-120 311-404 (582)
180 PRK06841 short chain dehydroge 98.9 8.5E-09 1.8E-13 97.6 12.5 81 36-119 12-100 (255)
181 PRK06924 short chain dehydroge 98.9 5.2E-09 1.1E-13 98.8 11.0 78 39-118 1-90 (251)
182 PRK12939 short chain dehydroge 98.9 8.3E-09 1.8E-13 97.1 12.4 81 37-119 5-95 (250)
183 PRK08251 short chain dehydroge 98.9 2.5E-08 5.5E-13 93.9 15.6 79 39-119 2-92 (248)
184 KOG2865 NADH:ubiquinone oxidor 98.9 1.4E-08 3E-13 94.6 13.1 173 37-237 59-246 (391)
185 PRK12320 hypothetical protein; 98.9 3.9E-09 8.4E-14 112.4 10.9 96 40-144 1-103 (699)
186 PRK07792 fabG 3-ketoacyl-(acyl 98.9 8.4E-09 1.8E-13 100.8 12.5 88 31-120 4-101 (306)
187 PRK07677 short chain dehydroge 98.9 3.7E-09 8E-14 100.1 9.7 79 39-119 1-89 (252)
188 PRK06483 dihydromonapterin red 98.9 5.8E-09 1.3E-13 97.6 10.9 78 38-119 1-85 (236)
189 PRK07791 short chain dehydroge 98.9 6.6E-09 1.4E-13 100.5 11.4 82 37-120 4-104 (286)
190 PRK08415 enoyl-(acyl carrier p 98.9 9.4E-09 2E-13 98.8 12.4 80 37-119 3-94 (274)
191 PRK06947 glucose-1-dehydrogena 98.9 8.5E-09 1.8E-13 97.1 11.8 80 38-119 1-91 (248)
192 PRK06057 short chain dehydroge 98.9 8.9E-09 1.9E-13 97.6 11.9 79 37-119 5-90 (255)
193 PRK12828 short chain dehydroge 98.9 1.2E-08 2.5E-13 95.3 12.5 81 37-119 5-93 (239)
194 PRK09730 putative NAD(P)-bindi 98.9 2E-08 4.4E-13 94.3 14.2 79 39-119 1-90 (247)
195 PRK08862 short chain dehydroge 98.9 1.1E-08 2.4E-13 95.5 12.2 81 36-118 2-93 (227)
196 PRK08993 2-deoxy-D-gluconate 3 98.9 1E-08 2.3E-13 97.1 12.1 81 36-119 7-96 (253)
197 KOG1014 17 beta-hydroxysteroid 98.9 2.5E-08 5.4E-13 94.6 14.3 153 35-192 46-219 (312)
198 PRK05599 hypothetical protein; 98.9 1E-08 2.2E-13 96.9 11.8 78 40-120 1-89 (246)
199 PF00106 adh_short: short chai 98.9 1.1E-09 2.3E-14 96.7 4.8 80 40-120 1-92 (167)
200 PRK05650 short chain dehydroge 98.9 9.7E-09 2.1E-13 98.3 11.8 79 40-120 1-89 (270)
201 PRK07831 short chain dehydroge 98.9 1E-08 2.2E-13 97.6 11.6 82 36-119 14-108 (262)
202 PRK06463 fabG 3-ketoacyl-(acyl 98.9 1.6E-08 3.5E-13 95.9 12.8 79 36-119 4-90 (255)
203 PRK08703 short chain dehydroge 98.9 1.2E-07 2.6E-12 88.9 18.5 81 37-119 4-98 (239)
204 TIGR03649 ergot_EASG ergot alk 98.9 5.1E-09 1.1E-13 101.1 9.2 93 41-141 1-102 (285)
205 PRK12935 acetoacetyl-CoA reduc 98.9 9.5E-09 2.1E-13 96.8 10.7 82 37-120 4-96 (247)
206 PRK06124 gluconate 5-dehydroge 98.9 1.4E-08 3E-13 96.2 11.9 82 36-119 8-99 (256)
207 TIGR02632 RhaD_aldol-ADH rhamn 98.9 7E-09 1.5E-13 111.8 11.0 82 36-119 411-504 (676)
208 PRK08220 2,3-dihydroxybenzoate 98.9 8.9E-09 1.9E-13 97.2 10.0 76 36-119 5-87 (252)
209 PRK12742 oxidoreductase; Provi 98.9 1.5E-08 3.3E-13 94.7 11.4 79 37-119 4-86 (237)
210 PRK12747 short chain dehydroge 98.9 1.3E-08 2.8E-13 96.3 10.8 81 37-119 2-99 (252)
211 PRK06125 short chain dehydroge 98.9 1.9E-08 4E-13 95.7 11.9 81 37-119 5-92 (259)
212 PRK07023 short chain dehydroge 98.9 2E-08 4.4E-13 94.4 12.0 77 39-119 1-88 (243)
213 PRK06523 short chain dehydroge 98.9 1.4E-08 3E-13 96.4 10.9 75 36-118 6-87 (260)
214 PRK12937 short chain dehydroge 98.9 2.5E-08 5.5E-13 93.6 12.4 81 37-119 3-94 (245)
215 PRK06077 fabG 3-ketoacyl-(acyl 98.9 7.9E-08 1.7E-12 90.6 15.7 80 37-118 4-94 (252)
216 PRK06113 7-alpha-hydroxysteroi 98.9 2.1E-08 4.7E-13 95.0 11.8 81 37-119 9-99 (255)
217 PRK08303 short chain dehydroge 98.9 2.3E-08 5.1E-13 97.7 12.3 80 36-117 5-105 (305)
218 PLN02503 fatty acyl-CoA reduct 98.9 2E-08 4.4E-13 105.7 12.6 125 20-144 100-269 (605)
219 PRK07904 short chain dehydroge 98.9 5.8E-08 1.3E-12 92.2 14.7 82 37-119 6-98 (253)
220 PRK06198 short chain dehydroge 98.9 2.9E-08 6.3E-13 94.2 12.5 81 37-119 4-95 (260)
221 PRK08945 putative oxoacyl-(acy 98.8 3.7E-08 8.1E-13 92.8 13.1 81 36-118 9-102 (247)
222 PRK08226 short chain dehydroge 98.8 1.9E-08 4.1E-13 95.7 11.1 80 37-119 4-93 (263)
223 PRK08324 short chain dehydroge 98.8 2.4E-08 5.2E-13 108.0 13.3 82 36-119 419-509 (681)
224 PRK05557 fabG 3-ketoacyl-(acyl 98.8 7.2E-08 1.6E-12 90.3 14.9 81 37-119 3-94 (248)
225 PRK06953 short chain dehydroge 98.8 1.7E-08 3.6E-13 93.7 10.4 76 39-119 1-81 (222)
226 PRK08936 glucose-1-dehydrogena 98.8 4.2E-08 9E-13 93.3 13.2 82 36-119 4-96 (261)
227 TIGR02415 23BDH acetoin reduct 98.8 2E-08 4.4E-13 94.8 11.0 78 40-119 1-88 (254)
228 PRK06940 short chain dehydroge 98.8 1.9E-07 4.2E-12 89.7 18.0 78 38-119 1-87 (275)
229 TIGR01289 LPOR light-dependent 98.8 3.6E-08 7.8E-13 96.7 12.9 80 38-119 2-92 (314)
230 PRK08594 enoyl-(acyl carrier p 98.8 2.7E-08 5.9E-13 94.7 11.7 81 37-119 5-98 (257)
231 PRK12938 acetyacetyl-CoA reduc 98.8 2.5E-08 5.4E-13 93.8 11.2 81 37-119 1-92 (246)
232 PRK07069 short chain dehydroge 98.8 3.6E-08 7.9E-13 92.8 12.3 78 41-120 1-91 (251)
233 PRK05565 fabG 3-ketoacyl-(acyl 98.8 1.5E-08 3.3E-13 95.0 9.6 82 36-119 2-94 (247)
234 PRK06505 enoyl-(acyl carrier p 98.8 3.8E-08 8.2E-13 94.5 12.5 80 37-119 5-96 (271)
235 PRK07370 enoyl-(acyl carrier p 98.8 7E-08 1.5E-12 91.9 14.2 153 37-193 4-181 (258)
236 PRK08309 short chain dehydroge 98.8 4.4E-08 9.5E-13 87.8 12.0 100 40-145 1-114 (177)
237 PRK07984 enoyl-(acyl carrier p 98.8 4.6E-08 1E-12 93.4 12.9 80 37-119 4-95 (262)
238 PRK06484 short chain dehydroge 98.8 2.5E-08 5.3E-13 104.6 11.9 80 37-118 3-89 (520)
239 PRK08217 fabG 3-ketoacyl-(acyl 98.8 1.4E-07 2.9E-12 88.9 15.9 81 37-119 3-93 (253)
240 PRK07889 enoyl-(acyl carrier p 98.8 7.3E-08 1.6E-12 91.6 14.0 81 37-119 5-96 (256)
241 KOG1201 Hydroxysteroid 17-beta 98.8 1.3E-07 2.9E-12 89.4 15.4 99 34-134 33-144 (300)
242 PRK07424 bifunctional sterol d 98.8 2.4E-08 5.2E-13 100.7 11.2 82 36-119 175-256 (406)
243 PRK07533 enoyl-(acyl carrier p 98.8 4E-08 8.6E-13 93.5 11.7 81 36-119 7-99 (258)
244 PRK08017 oxidoreductase; Provi 98.8 4.2E-08 9.1E-13 92.8 11.8 76 39-119 2-85 (256)
245 PRK12743 oxidoreductase; Provi 98.8 2.9E-08 6.3E-13 94.2 10.6 81 38-120 1-92 (256)
246 KOG0725 Reductases with broad 98.8 8.7E-08 1.9E-12 91.8 13.5 153 36-192 5-183 (270)
247 PLN02780 ketoreductase/ oxidor 98.8 4.3E-08 9.2E-13 96.5 11.7 80 38-119 52-143 (320)
248 PRK08159 enoyl-(acyl carrier p 98.8 4.6E-08 1E-12 93.9 11.5 80 37-119 8-99 (272)
249 PRK07577 short chain dehydroge 98.8 3.9E-08 8.5E-13 91.7 10.6 73 38-120 2-80 (234)
250 PRK12367 short chain dehydroge 98.8 2.5E-08 5.5E-13 94.3 9.4 82 34-119 9-90 (245)
251 PRK08690 enoyl-(acyl carrier p 98.8 1.2E-07 2.7E-12 90.3 13.6 80 37-119 4-95 (261)
252 PRK07201 short chain dehydroge 98.8 5.4E-08 1.2E-12 105.0 12.2 82 36-119 368-459 (657)
253 PRK12859 3-ketoacyl-(acyl-carr 98.8 4.9E-08 1.1E-12 92.7 10.6 81 37-119 4-107 (256)
254 PRK06171 sorbitol-6-phosphate 98.8 5.4E-08 1.2E-12 92.7 10.9 76 36-119 6-88 (266)
255 PRK07832 short chain dehydroge 98.7 7.4E-08 1.6E-12 92.3 11.2 78 40-119 1-89 (272)
256 PRK06603 enoyl-(acyl carrier p 98.7 7.1E-08 1.5E-12 92.0 10.8 80 37-119 6-97 (260)
257 PRK06720 hypothetical protein; 98.7 8.8E-08 1.9E-12 85.3 10.6 83 36-120 13-105 (169)
258 PRK12748 3-ketoacyl-(acyl-carr 98.7 7E-08 1.5E-12 91.5 10.4 82 36-119 2-106 (256)
259 PRK06550 fabG 3-ketoacyl-(acyl 98.7 5.1E-08 1.1E-12 91.1 9.3 76 36-119 2-78 (235)
260 COG2910 Putative NADH-flavin r 98.7 9.5E-08 2.1E-12 83.8 9.5 94 40-140 1-101 (211)
261 PRK07041 short chain dehydroge 98.7 3E-07 6.4E-12 85.6 13.7 75 43-119 1-80 (230)
262 PRK09009 C factor cell-cell si 98.7 8.5E-08 1.9E-12 89.6 9.6 76 40-120 1-79 (235)
263 KOG1209 1-Acyl dihydroxyaceton 98.7 7.5E-08 1.6E-12 86.2 8.5 139 38-187 6-166 (289)
264 PRK12824 acetoacetyl-CoA reduc 98.7 1.2E-07 2.6E-12 88.9 10.4 79 39-119 2-91 (245)
265 TIGR01829 AcAcCoA_reduct aceto 98.7 1.7E-07 3.7E-12 87.7 11.3 78 40-119 1-89 (242)
266 PRK06997 enoyl-(acyl carrier p 98.7 2E-07 4.4E-12 88.8 11.8 80 37-119 4-95 (260)
267 PRK08261 fabG 3-ketoacyl-(acyl 98.7 5.3E-07 1.1E-11 92.9 15.7 82 34-119 205-295 (450)
268 KOG1208 Dehydrogenases with di 98.6 6.7E-07 1.4E-11 87.2 14.8 82 37-120 33-126 (314)
269 TIGR01500 sepiapter_red sepiap 98.6 8.9E-07 1.9E-11 84.0 15.4 79 41-119 2-98 (256)
270 TIGR03443 alpha_am_amid L-amin 98.6 2.6E-07 5.6E-12 108.0 13.3 171 39-211 971-1186(1389)
271 KOG1200 Mitochondrial/plastidi 98.6 2.9E-07 6.3E-12 81.3 10.2 84 36-121 11-103 (256)
272 TIGR01831 fabG_rel 3-oxoacyl-( 98.6 4.4E-07 9.6E-12 84.9 11.7 76 42-119 1-87 (239)
273 KOG1610 Corticosteroid 11-beta 98.6 8.2E-07 1.8E-11 84.5 13.1 155 37-200 27-208 (322)
274 KOG1431 GDP-L-fucose synthetas 98.6 1.8E-07 3.9E-12 84.4 8.2 151 39-210 1-172 (315)
275 smart00822 PKS_KR This enzymat 98.6 7.6E-07 1.6E-11 78.4 12.0 78 40-119 1-92 (180)
276 COG1089 Gmd GDP-D-mannose dehy 98.6 1.7E-07 3.6E-12 87.5 7.8 157 38-203 1-184 (345)
277 TIGR01777 yfcH conserved hypot 98.6 2.4E-07 5.3E-12 89.2 9.1 86 42-137 1-103 (292)
278 TIGR01830 3oxo_ACP_reduc 3-oxo 98.6 3.7E-07 8.1E-12 85.1 10.1 76 42-119 1-87 (239)
279 TIGR00715 precor6x_red precorr 98.6 3.1E-07 6.8E-12 86.9 9.4 97 40-142 1-99 (256)
280 PLN00015 protochlorophyllide r 98.6 3.5E-07 7.7E-12 89.4 10.2 75 43-119 1-86 (308)
281 KOG4169 15-hydroxyprostaglandi 98.5 5.4E-07 1.2E-11 81.7 10.2 84 36-121 2-96 (261)
282 COG0702 Predicted nucleoside-d 98.5 1.5E-06 3.2E-11 82.9 13.7 73 40-118 1-73 (275)
283 PRK12548 shikimate 5-dehydroge 98.5 8.7E-07 1.9E-11 85.9 12.0 138 37-188 124-271 (289)
284 PLN02730 enoyl-[acyl-carrier-p 98.5 5.6E-07 1.2E-11 87.7 10.7 81 35-118 5-130 (303)
285 PRK00048 dihydrodipicolinate r 98.5 3.1E-07 6.8E-12 87.4 8.7 129 39-185 1-133 (257)
286 cd01078 NAD_bind_H4MPT_DH NADP 98.5 7.1E-07 1.5E-11 81.3 10.4 107 36-146 25-133 (194)
287 PRK07578 short chain dehydroge 98.5 7.4E-07 1.6E-11 81.2 10.1 63 40-119 1-66 (199)
288 PLN02968 Probable N-acetyl-gam 98.5 1.7E-06 3.7E-11 86.7 12.8 101 37-145 36-137 (381)
289 KOG1611 Predicted short chain- 98.5 1.8E-06 3.9E-11 78.3 11.5 84 37-121 1-97 (249)
290 KOG1207 Diacetyl reductase/L-x 98.5 3.6E-06 7.7E-11 73.2 12.5 84 36-121 4-90 (245)
291 TIGR01921 DAP-DH diaminopimela 98.4 3.2E-06 7E-11 82.1 13.6 123 38-177 2-127 (324)
292 PF08659 KR: KR domain; Inter 98.4 1.1E-06 2.3E-11 79.2 9.3 78 41-119 2-92 (181)
293 COG1090 Predicted nucleoside-d 98.4 1E-06 2.2E-11 82.4 8.9 66 42-119 1-67 (297)
294 PF01118 Semialdhyde_dh: Semia 98.4 2.1E-06 4.6E-11 72.0 9.8 96 41-145 1-100 (121)
295 TIGR02685 pter_reduc_Leis pter 98.4 1E-06 2.3E-11 84.1 9.0 78 40-119 2-95 (267)
296 cd01065 NAD_bind_Shikimate_DH 98.4 1.9E-06 4E-11 75.3 9.3 121 37-168 17-138 (155)
297 PRK13302 putative L-aspartate 98.3 1E-05 2.2E-10 77.6 13.5 141 37-200 4-145 (271)
298 COG0002 ArgC Acetylglutamate s 98.3 3.3E-06 7.1E-11 81.7 9.9 140 38-185 1-166 (349)
299 COG1028 FabG Dehydrogenases wi 98.3 4.9E-06 1.1E-10 78.4 10.6 83 36-120 2-98 (251)
300 PLN00106 malate dehydrogenase 98.3 8E-06 1.7E-10 80.0 12.3 98 40-139 19-130 (323)
301 PRK00436 argC N-acetyl-gamma-g 98.3 2.2E-06 4.7E-11 85.1 8.3 101 38-145 1-102 (343)
302 PTZ00325 malate dehydrogenase; 98.3 3.5E-05 7.7E-10 75.4 16.2 104 37-142 6-123 (321)
303 PRK13304 L-aspartate dehydroge 98.2 1.3E-05 2.9E-10 76.6 12.0 140 39-200 1-142 (265)
304 PF01488 Shikimate_DH: Shikima 98.2 4.3E-06 9.4E-11 71.5 7.5 76 36-118 9-85 (135)
305 PRK14982 acyl-ACP reductase; P 98.2 6.7E-06 1.4E-10 80.8 9.4 99 34-144 150-248 (340)
306 KOG1210 Predicted 3-ketosphing 98.2 3.9E-05 8.6E-10 73.1 13.9 78 40-119 34-123 (331)
307 PRK00258 aroE shikimate 5-dehy 98.1 1.6E-05 3.6E-10 76.6 10.6 133 36-187 120-255 (278)
308 KOG1199 Short-chain alcohol de 98.1 8.9E-06 1.9E-10 70.6 7.3 82 37-120 7-95 (260)
309 PRK12549 shikimate 5-dehydroge 98.1 1.7E-05 3.7E-10 76.6 9.8 133 37-187 125-261 (284)
310 PF13561 adh_short_C2: Enoyl-( 98.1 4.3E-06 9.4E-11 78.5 5.4 71 46-120 1-85 (241)
311 COG0289 DapB Dihydrodipicolina 98.0 0.00012 2.6E-09 68.4 14.0 214 38-269 1-230 (266)
312 TIGR02813 omega_3_PfaA polyket 98.0 6.3E-05 1.4E-09 90.9 15.2 82 38-120 1996-2133(2582)
313 TIGR01850 argC N-acetyl-gamma- 98.0 1.6E-05 3.4E-10 79.0 7.6 100 40-145 1-102 (346)
314 PRK14027 quinate/shikimate deh 98.0 5.2E-05 1.1E-09 73.1 10.8 149 26-187 107-263 (283)
315 PRK13303 L-aspartate dehydroge 98.0 0.00018 3.9E-09 68.8 14.1 126 39-176 1-127 (265)
316 TIGR00036 dapB dihydrodipicoli 97.9 7.6E-05 1.6E-09 71.4 11.2 127 40-176 2-132 (266)
317 PRK14874 aspartate-semialdehyd 97.9 2.7E-05 6E-10 77.0 8.4 96 39-145 1-97 (334)
318 TIGR00507 aroE shikimate 5-deh 97.9 0.00011 2.3E-09 70.6 11.8 131 38-187 116-248 (270)
319 PRK09620 hypothetical protein; 97.9 1.7E-05 3.6E-10 74.1 5.9 80 37-120 1-99 (229)
320 TIGR02853 spore_dpaA dipicolin 97.9 9.8E-05 2.1E-09 71.4 11.4 114 36-168 148-261 (287)
321 PRK13656 trans-2-enoyl-CoA red 97.9 6.2E-05 1.3E-09 74.8 9.9 79 38-119 40-142 (398)
322 KOG4039 Serine/threonine kinas 97.9 4.6E-05 1E-09 66.6 7.6 100 37-140 16-127 (238)
323 cd01336 MDH_cytoplasmic_cytoso 97.9 1.5E-05 3.3E-10 78.4 5.3 82 39-120 2-90 (325)
324 PRK05671 aspartate-semialdehyd 97.9 3.2E-05 7E-10 76.2 7.5 97 38-145 3-100 (336)
325 TIGR02356 adenyl_thiF thiazole 97.9 0.0001 2.2E-09 67.6 10.3 104 33-142 15-143 (202)
326 PRK12475 thiamine/molybdopteri 97.9 6.4E-05 1.4E-09 74.3 9.3 107 30-142 15-148 (338)
327 TIGR01809 Shik-DH-AROM shikima 97.9 0.00015 3.3E-09 70.0 11.6 134 37-187 123-265 (282)
328 PRK14106 murD UDP-N-acetylmura 97.9 0.00011 2.4E-09 75.7 11.3 93 36-139 2-96 (450)
329 KOG1221 Acyl-CoA reductase [Li 97.9 3.7E-05 8E-10 77.9 7.5 165 35-201 8-234 (467)
330 COG0569 TrkA K+ transport syst 97.8 0.00015 3.3E-09 67.5 10.9 96 40-142 1-99 (225)
331 COG1712 Predicted dinucleotide 97.8 0.0002 4.2E-09 65.2 11.0 139 40-200 1-141 (255)
332 PRK08664 aspartate-semialdehyd 97.8 6.3E-05 1.4E-09 74.9 8.6 101 37-145 1-110 (349)
333 KOG1478 3-keto sterol reductas 97.8 8.8E-05 1.9E-09 68.5 8.3 100 38-138 2-118 (341)
334 PRK06300 enoyl-(acyl carrier p 97.8 3.4E-05 7.4E-10 75.1 6.0 37 36-74 5-43 (299)
335 COG0373 HemA Glutamyl-tRNA red 97.8 0.0001 2.2E-09 73.8 9.4 101 34-143 173-275 (414)
336 COG0169 AroE Shikimate 5-dehyd 97.8 0.00019 4E-09 68.9 10.3 133 38-188 125-261 (283)
337 PF01408 GFO_IDH_MocA: Oxidore 97.8 0.00055 1.2E-08 56.8 12.0 116 40-168 1-119 (120)
338 KOG2774 NAD dependent epimeras 97.7 2.5E-05 5.4E-10 71.2 3.8 155 36-200 41-211 (366)
339 PRK11863 N-acetyl-gamma-glutam 97.7 0.00041 8.8E-09 67.5 12.5 84 38-145 1-84 (313)
340 PF03446 NAD_binding_2: NAD bi 97.7 0.00011 2.5E-09 64.8 7.8 110 39-165 1-115 (163)
341 PRK07688 thiamine/molybdopteri 97.7 0.00015 3.3E-09 71.7 9.2 105 32-142 17-148 (339)
342 KOG1203 Predicted dehydrogenas 97.7 0.00019 4.2E-09 71.6 9.9 106 36-143 76-200 (411)
343 PF03807 F420_oxidored: NADP o 97.7 0.00041 8.9E-09 55.3 10.1 88 41-142 1-94 (96)
344 PRK12749 quinate/shikimate deh 97.7 0.00044 9.5E-09 66.9 12.1 149 27-188 105-268 (288)
345 cd01075 NAD_bind_Leu_Phe_Val_D 97.7 0.00045 9.8E-09 63.2 11.5 118 34-171 23-141 (200)
346 PRK05579 bifunctional phosphop 97.7 0.00012 2.6E-09 73.8 8.4 76 35-120 184-279 (399)
347 COG0673 MviM Predicted dehydro 97.7 0.0014 3E-08 64.8 15.9 148 37-202 1-155 (342)
348 PF00899 ThiF: ThiF family; I 97.7 0.00021 4.7E-09 60.9 8.7 99 39-143 2-125 (135)
349 PRK08223 hypothetical protein; 97.7 0.00033 7.1E-09 67.1 10.7 106 33-141 21-150 (287)
350 PRK08306 dipicolinate synthase 97.7 0.00043 9.4E-09 67.3 11.7 112 36-166 149-260 (296)
351 cd00757 ThiF_MoeB_HesA_family 97.7 0.00022 4.8E-09 66.6 9.2 105 33-142 15-143 (228)
352 PRK13301 putative L-aspartate 97.7 0.00049 1.1E-08 64.9 11.2 126 39-180 2-132 (267)
353 PF01113 DapB_N: Dihydrodipico 97.6 7E-05 1.5E-09 63.0 5.0 94 40-141 1-97 (124)
354 cd01338 MDH_choloroplast_like 97.6 0.00043 9.2E-09 68.0 11.1 157 39-209 2-186 (322)
355 cd05213 NAD_bind_Glutamyl_tRNA 97.6 0.00028 6E-09 69.2 9.6 122 10-143 149-274 (311)
356 PRK04148 hypothetical protein; 97.6 0.0005 1.1E-08 58.3 9.3 92 38-140 16-107 (134)
357 PRK08762 molybdopterin biosynt 97.6 0.00038 8.2E-09 70.1 10.0 104 34-142 130-257 (376)
358 TIGR01296 asd_B aspartate-semi 97.6 0.00017 3.6E-09 71.5 7.2 94 41-145 1-95 (339)
359 PRK05086 malate dehydrogenase; 97.6 0.003 6.5E-08 61.9 15.9 97 40-139 1-113 (312)
360 TIGR01851 argC_other N-acetyl- 97.6 0.00053 1.2E-08 66.4 10.4 82 40-145 2-83 (310)
361 PRK08057 cobalt-precorrin-6x r 97.6 0.00046 1E-08 65.1 9.7 96 38-141 1-98 (248)
362 PRK08644 thiamine biosynthesis 97.5 0.00045 9.7E-09 63.8 9.2 105 33-142 22-150 (212)
363 PLN02520 bifunctional 3-dehydr 97.5 0.0006 1.3E-08 71.6 11.2 132 36-188 376-510 (529)
364 PRK05447 1-deoxy-D-xylulose 5- 97.5 0.0017 3.7E-08 64.6 13.7 124 39-167 1-146 (385)
365 TIGR00518 alaDH alanine dehydr 97.5 0.00084 1.8E-08 67.3 11.4 101 37-144 165-269 (370)
366 PLN02383 aspartate semialdehyd 97.5 0.00043 9.3E-09 68.6 9.1 97 38-145 6-103 (344)
367 PF00056 Ldh_1_N: lactate/mala 97.5 0.00076 1.7E-08 58.1 9.5 76 40-120 1-81 (141)
368 PRK08040 putative semialdehyde 97.5 0.00029 6.3E-09 69.4 7.7 96 38-145 3-100 (336)
369 PF02571 CbiJ: Precorrin-6x re 97.5 0.00051 1.1E-08 64.9 9.0 97 40-141 1-99 (249)
370 TIGR02355 moeB molybdopterin s 97.5 0.00097 2.1E-08 62.8 10.8 105 33-142 18-146 (240)
371 PRK05597 molybdopterin biosynt 97.5 0.00063 1.4E-08 67.9 10.0 105 33-142 22-150 (355)
372 PRK09496 trkA potassium transp 97.5 0.00095 2.1E-08 68.8 11.5 93 40-139 1-95 (453)
373 PRK06728 aspartate-semialdehyd 97.5 0.0013 2.9E-08 64.8 11.9 96 38-145 4-102 (347)
374 TIGR00978 asd_EA aspartate-sem 97.5 0.0025 5.5E-08 63.2 14.0 98 40-145 1-107 (341)
375 PRK15116 sulfur acceptor prote 97.5 0.001 2.2E-08 63.4 10.7 107 34-144 25-155 (268)
376 cd01483 E1_enzyme_family Super 97.5 0.0013 2.8E-08 56.6 10.5 98 41-144 1-123 (143)
377 cd00755 YgdL_like Family of ac 97.4 0.00067 1.5E-08 63.4 8.8 106 34-144 6-136 (231)
378 PF02254 TrkA_N: TrkA-N domain 97.4 0.0012 2.6E-08 54.4 9.3 84 42-133 1-85 (116)
379 PRK13940 glutamyl-tRNA reducta 97.4 0.00034 7.3E-09 71.0 7.0 75 36-118 178-252 (414)
380 TIGR01470 cysG_Nterm siroheme 97.4 0.00091 2E-08 61.4 8.9 134 37-185 7-142 (205)
381 PRK06153 hypothetical protein; 97.4 0.00086 1.9E-08 66.6 9.2 103 34-142 171-298 (393)
382 cd01485 E1-1_like Ubiquitin ac 97.4 0.001 2.2E-08 60.8 9.1 108 32-143 12-146 (198)
383 PRK05600 thiamine biosynthesis 97.4 0.0012 2.6E-08 66.2 10.2 105 33-142 35-163 (370)
384 PRK05690 molybdopterin biosynt 97.4 0.0017 3.8E-08 61.3 10.8 104 33-141 26-153 (245)
385 cd01492 Aos1_SUMO Ubiquitin ac 97.3 0.0013 2.9E-08 59.9 9.6 105 33-143 15-143 (197)
386 PRK00045 hemA glutamyl-tRNA re 97.3 0.0015 3.4E-08 66.7 11.0 97 37-143 180-281 (423)
387 PLN00203 glutamyl-tRNA reducta 97.3 0.0019 4.2E-08 67.3 11.7 101 37-144 264-371 (519)
388 PRK14852 hypothetical protein; 97.3 0.0016 3.4E-08 71.7 11.2 106 34-142 327-456 (989)
389 PRK14851 hypothetical protein; 97.3 0.0013 2.8E-08 70.7 10.5 107 33-142 37-167 (679)
390 PRK06732 phosphopantothenate-- 97.3 0.00084 1.8E-08 62.8 7.7 81 34-120 11-93 (229)
391 PRK08328 hypothetical protein; 97.3 0.0018 4E-08 60.6 9.9 105 33-142 21-150 (231)
392 PRK12550 shikimate 5-dehydroge 97.3 0.0021 4.5E-08 61.6 10.4 124 39-187 122-250 (272)
393 smart00859 Semialdhyde_dh Semi 97.3 0.00082 1.8E-08 56.2 6.7 97 41-145 1-102 (122)
394 cd01487 E1_ThiF_like E1_ThiF_l 97.3 0.0021 4.5E-08 57.4 9.7 95 41-141 1-120 (174)
395 PRK09496 trkA potassium transp 97.3 0.0027 5.9E-08 65.4 12.0 97 37-139 229-326 (453)
396 PRK06718 precorrin-2 dehydroge 97.3 0.0027 5.9E-08 58.1 10.6 134 36-185 7-142 (202)
397 KOG1372 GDP-mannose 4,6 dehydr 97.2 0.00024 5.2E-09 65.3 3.4 147 39-193 28-204 (376)
398 PRK07877 hypothetical protein; 97.2 0.0012 2.7E-08 71.1 9.2 105 34-143 102-229 (722)
399 PRK12428 3-alpha-hydroxysteroi 97.2 0.0015 3.2E-08 61.4 8.8 127 55-191 1-156 (241)
400 PRK06598 aspartate-semialdehyd 97.2 0.0042 9E-08 61.8 12.1 96 39-145 1-101 (369)
401 PRK04207 glyceraldehyde-3-phos 97.2 0.0018 3.9E-08 64.2 9.4 101 39-144 1-111 (341)
402 cd05311 NAD_bind_2_malic_enz N 97.2 0.004 8.7E-08 58.0 11.2 111 35-164 21-145 (226)
403 TIGR01915 npdG NADPH-dependent 97.2 0.0012 2.7E-08 61.2 7.8 74 40-119 1-79 (219)
404 cd00704 MDH Malate dehydrogena 97.2 0.0013 2.8E-08 64.7 7.8 69 41-120 2-88 (323)
405 TIGR01035 hemA glutamyl-tRNA r 97.1 0.0037 7.9E-08 63.8 11.4 97 37-143 178-278 (417)
406 PF00670 AdoHcyase_NAD: S-aden 97.1 0.003 6.5E-08 55.2 9.1 70 37-120 21-90 (162)
407 COG1023 Gnd Predicted 6-phosph 97.1 0.0047 1E-07 56.9 10.4 103 40-146 1-123 (300)
408 COG3804 Uncharacterized conser 97.1 0.01 2.3E-07 55.8 12.8 139 39-185 2-146 (350)
409 PRK02472 murD UDP-N-acetylmura 97.1 0.0031 6.8E-08 64.9 10.5 92 37-139 3-96 (447)
410 TIGR01758 MDH_euk_cyt malate d 97.1 0.0012 2.5E-08 65.1 6.8 71 41-120 1-87 (324)
411 COG0623 FabI Enoyl-[acyl-carri 97.1 0.011 2.4E-07 54.3 12.2 81 36-119 3-95 (259)
412 PRK08300 acetaldehyde dehydrog 97.1 0.0044 9.5E-08 59.9 10.3 99 37-145 2-104 (302)
413 PRK11579 putative oxidoreducta 97.1 0.021 4.5E-07 56.8 15.6 144 39-201 4-151 (346)
414 TIGR00872 gnd_rel 6-phosphoglu 97.0 0.0048 1E-07 60.0 10.7 92 40-144 1-95 (298)
415 PRK08655 prephenate dehydrogen 97.0 0.0016 3.5E-08 66.8 7.7 91 40-144 1-94 (437)
416 COG2085 Predicted dinucleotide 97.0 0.0029 6.2E-08 57.5 8.3 91 39-143 1-94 (211)
417 cd01484 E1-2_like Ubiquitin ac 97.0 0.0044 9.6E-08 58.0 9.9 99 41-143 1-124 (234)
418 PRK07878 molybdopterin biosynt 97.0 0.004 8.7E-08 63.0 10.2 104 34-142 37-164 (392)
419 PRK07411 hypothetical protein; 97.0 0.004 8.8E-08 62.9 10.2 104 33-141 32-159 (390)
420 PLN02696 1-deoxy-D-xylulose-5- 97.0 0.019 4.1E-07 58.3 14.7 124 39-167 57-204 (454)
421 TIGR02130 dapB_plant dihydrodi 97.0 0.013 2.9E-07 55.7 12.9 124 41-176 2-130 (275)
422 TIGR00521 coaBC_dfp phosphopan 97.0 0.0025 5.4E-08 64.2 8.4 75 36-120 182-277 (390)
423 PRK09310 aroDE bifunctional 3- 97.0 0.0037 8E-08 64.9 9.8 121 37-187 330-450 (477)
424 COG2099 CobK Precorrin-6x redu 97.0 0.0029 6.2E-08 58.9 7.9 96 39-141 2-99 (257)
425 PF02826 2-Hacid_dh_C: D-isome 97.0 0.0017 3.8E-08 58.1 6.5 72 33-118 30-101 (178)
426 PRK08618 ornithine cyclodeamin 97.0 0.0036 7.8E-08 61.7 9.2 96 39-145 127-224 (325)
427 PRK07340 ornithine cyclodeamin 97.0 0.0021 4.4E-08 62.8 7.4 96 38-145 124-220 (304)
428 PRK11559 garR tartronate semia 97.0 0.0059 1.3E-07 59.3 10.6 67 39-118 2-68 (296)
429 TIGR00243 Dxr 1-deoxy-D-xylulo 97.0 0.011 2.4E-07 58.6 12.3 124 39-167 1-148 (389)
430 cd01489 Uba2_SUMO Ubiquitin ac 96.9 0.0058 1.3E-07 59.6 10.0 99 41-143 1-123 (312)
431 cd01080 NAD_bind_m-THF_DH_Cycl 96.9 0.0032 6.9E-08 55.8 7.5 80 35-145 40-119 (168)
432 PRK10669 putative cation:proto 96.9 0.0055 1.2E-07 65.1 10.4 88 39-134 417-505 (558)
433 PRK03659 glutathione-regulated 96.9 0.0051 1.1E-07 65.8 10.2 90 39-136 400-490 (601)
434 PRK09599 6-phosphogluconate de 96.9 0.013 2.7E-07 57.2 12.2 69 40-118 1-69 (301)
435 COG1179 Dinucleotide-utilizing 96.9 0.0075 1.6E-07 55.7 9.5 105 35-143 26-154 (263)
436 cd01491 Ube1_repeat1 Ubiquitin 96.9 0.0015 3.3E-08 62.8 5.3 101 33-140 13-135 (286)
437 PRK03562 glutathione-regulated 96.9 0.0058 1.3E-07 65.6 10.2 89 39-135 400-489 (621)
438 COG0136 Asd Aspartate-semialde 96.9 0.0024 5.2E-08 62.1 6.6 99 39-145 1-100 (334)
439 cd00650 LDH_MDH_like NAD-depen 96.8 0.018 3.8E-07 55.0 12.4 78 42-119 1-81 (263)
440 PRK08291 ectoine utilization p 96.8 0.0048 1E-07 61.0 8.6 95 39-144 132-229 (330)
441 PRK11880 pyrroline-5-carboxyla 96.8 0.0058 1.2E-07 58.4 8.9 71 39-119 2-73 (267)
442 PLN02775 Probable dihydrodipic 96.8 0.04 8.7E-07 52.8 14.3 126 40-176 12-141 (286)
443 cd05291 HicDH_like L-2-hydroxy 96.8 0.0017 3.6E-08 63.5 5.2 75 40-119 1-79 (306)
444 TIGR02992 ectoine_eutC ectoine 96.8 0.0062 1.3E-07 60.1 9.2 95 39-144 129-226 (326)
445 PTZ00142 6-phosphogluconate de 96.8 0.019 4.1E-07 59.4 12.9 117 39-164 1-121 (470)
446 PRK00141 murD UDP-N-acetylmura 96.8 0.041 9E-07 57.2 15.5 100 26-139 3-102 (473)
447 KOG1198 Zinc-binding oxidoredu 96.8 0.011 2.4E-07 58.7 10.7 77 37-119 156-236 (347)
448 PRK06719 precorrin-2 dehydroge 96.7 0.0074 1.6E-07 52.9 8.3 134 36-187 10-144 (157)
449 TIGR01505 tartro_sem_red 2-hyd 96.7 0.017 3.7E-07 55.9 11.5 65 41-118 1-65 (291)
450 PF10727 Rossmann-like: Rossma 96.7 0.0041 8.9E-08 52.4 5.9 45 38-85 9-54 (127)
451 TIGR02114 coaB_strep phosphopa 96.7 0.0039 8.5E-08 58.2 6.4 75 34-119 10-91 (227)
452 cd01076 NAD_bind_1_Glu_DH NAD( 96.6 0.014 3E-07 54.4 9.6 121 35-168 27-158 (227)
453 PF01210 NAD_Gly3P_dh_N: NAD-d 96.6 0.0028 6E-08 55.6 4.3 74 41-119 1-80 (157)
454 cd05211 NAD_bind_Glu_Leu_Phe_V 96.6 0.024 5.2E-07 52.5 10.7 119 35-168 19-149 (217)
455 PRK07502 cyclohexadienyl dehyd 96.6 0.0071 1.5E-07 59.1 7.6 94 38-143 5-101 (307)
456 PTZ00117 malate dehydrogenase; 96.5 0.045 9.8E-07 53.8 13.3 77 37-120 3-85 (319)
457 PRK15461 NADH-dependent gamma- 96.5 0.024 5.3E-07 55.1 11.2 66 40-118 2-67 (296)
458 COG0743 Dxr 1-deoxy-D-xylulose 96.5 0.026 5.6E-07 55.3 11.1 123 39-167 1-144 (385)
459 PF02670 DXP_reductoisom: 1-de 96.5 0.024 5.2E-07 47.8 9.5 46 42-87 1-48 (129)
460 COG0686 Ald Alanine dehydrogen 96.5 0.0066 1.4E-07 58.0 6.7 101 38-144 167-270 (371)
461 PRK12490 6-phosphogluconate de 96.5 0.027 6E-07 54.8 11.4 93 40-144 1-96 (299)
462 PRK07679 pyrroline-5-carboxyla 96.5 0.012 2.5E-07 56.8 8.6 94 37-143 1-100 (279)
463 TIGR03693 ocin_ThiF_like putat 96.5 0.016 3.6E-07 60.6 10.1 104 33-139 124-235 (637)
464 PLN02350 phosphogluconate dehy 96.5 0.038 8.2E-07 57.4 12.6 75 39-117 6-81 (493)
465 PRK00094 gpsA NAD(P)H-dependen 96.5 0.0057 1.2E-07 60.0 6.4 76 39-118 1-81 (325)
466 PRK11064 wecC UDP-N-acetyl-D-m 96.4 0.029 6.2E-07 57.3 11.5 43 37-82 1-43 (415)
467 cd01337 MDH_glyoxysomal_mitoch 96.4 0.0057 1.2E-07 59.7 6.1 77 40-120 1-80 (310)
468 PLN02602 lactate dehydrogenase 96.4 0.0076 1.6E-07 59.9 7.0 89 25-120 20-117 (350)
469 cd05293 LDH_1 A subgroup of L- 96.4 0.051 1.1E-06 53.2 12.7 75 40-120 4-83 (312)
470 PRK11199 tyrA bifunctional cho 96.4 0.0057 1.2E-07 61.5 6.1 78 38-143 97-176 (374)
471 TIGR00873 gnd 6-phosphoglucona 96.4 0.047 1E-06 56.4 12.9 95 42-143 2-99 (467)
472 PRK14192 bifunctional 5,10-met 96.4 0.011 2.3E-07 57.0 7.6 82 32-144 152-233 (283)
473 TIGR00561 pntA NAD(P) transhyd 96.4 0.026 5.7E-07 58.6 10.8 101 38-145 163-287 (511)
474 PRK01438 murD UDP-N-acetylmura 96.4 0.025 5.5E-07 58.8 10.9 91 36-138 13-105 (480)
475 cd01486 Apg7 Apg7 is an E1-lik 96.4 0.037 7.9E-07 53.4 10.9 96 41-140 1-138 (307)
476 TIGR01759 MalateDH-SF1 malate 96.4 0.0081 1.8E-07 59.0 6.7 80 39-120 3-91 (323)
477 TIGR02354 thiF_fam2 thiamine b 96.3 0.015 3.3E-07 53.1 8.0 39 33-74 15-54 (200)
478 PRK05476 S-adenosyl-L-homocyst 96.3 0.014 3.1E-07 59.3 8.5 68 37-118 210-277 (425)
479 PRK10206 putative oxidoreducta 96.3 0.1 2.2E-06 51.9 14.4 143 40-201 2-151 (344)
480 cd00401 AdoHcyase S-adenosyl-L 96.3 0.024 5.2E-07 57.4 9.9 68 37-118 200-267 (413)
481 PRK06270 homoserine dehydrogen 96.3 0.18 3.9E-06 50.1 16.0 127 39-169 2-151 (341)
482 PRK00066 ldh L-lactate dehydro 96.3 0.0084 1.8E-07 58.8 6.4 77 38-119 5-84 (315)
483 PRK07417 arogenate dehydrogena 96.3 0.0089 1.9E-07 57.6 6.5 68 40-119 1-68 (279)
484 PF04127 DFP: DNA / pantothena 96.3 0.018 3.9E-07 51.9 7.9 71 41-121 21-95 (185)
485 TIGR01381 E1_like_apg7 E1-like 96.2 0.024 5.1E-07 59.9 9.7 38 35-74 334-371 (664)
486 COG2084 MmsB 3-hydroxyisobutyr 96.2 0.044 9.5E-07 52.7 10.8 66 40-117 1-66 (286)
487 PF13241 NAD_binding_7: Putati 96.2 0.019 4.1E-07 46.5 7.1 85 36-138 4-88 (103)
488 PRK06223 malate dehydrogenase; 96.2 0.01 2.2E-07 58.0 6.5 76 39-120 2-82 (307)
489 PRK14175 bifunctional 5,10-met 96.2 0.022 4.9E-07 54.7 8.7 81 34-145 153-233 (286)
490 PRK09424 pntA NAD(P) transhydr 96.2 0.06 1.3E-06 56.0 12.4 102 37-144 163-287 (509)
491 PRK06141 ornithine cyclodeamin 96.2 0.0096 2.1E-07 58.4 6.3 94 38-143 124-219 (314)
492 PRK06129 3-hydroxyacyl-CoA deh 96.2 0.0064 1.4E-07 59.5 5.0 75 40-117 3-91 (308)
493 PRK14618 NAD(P)H-dependent gly 96.2 0.013 2.9E-07 57.7 7.3 77 39-119 4-85 (328)
494 TIGR01761 thiaz-red thiazoliny 96.2 0.065 1.4E-06 53.1 12.0 114 39-168 3-121 (343)
495 cd08293 PTGR2 Prostaglandin re 96.2 0.04 8.7E-07 54.3 10.6 94 40-142 156-254 (345)
496 cd05294 LDH-like_MDH_nadp A la 96.2 0.0068 1.5E-07 59.3 4.9 75 40-118 1-82 (309)
497 PLN02928 oxidoreductase family 96.2 0.016 3.5E-07 57.6 7.6 80 35-117 155-235 (347)
498 PRK03369 murD UDP-N-acetylmura 96.1 0.044 9.5E-07 57.2 11.2 89 37-139 10-98 (488)
499 PTZ00075 Adenosylhomocysteinas 96.1 0.039 8.4E-07 56.6 10.3 69 36-118 251-319 (476)
500 PRK01710 murD UDP-N-acetylmura 96.1 0.037 7.9E-07 57.3 10.4 95 34-139 9-105 (458)
No 1
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-45 Score=360.15 Aligned_cols=351 Identities=23% Similarity=0.318 Sum_probs=290.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
|++|+|+|+ |+||+.+++.|++++ +.+|+++||+.++++++......+++.+++|+.|.+++.+++++.|+||||+++
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~-d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~ 78 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNG-DGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPP 78 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCC-CceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCc
Confidence 579999997 999999999999973 389999999999999998776668999999999999999999999999999998
Q ss_pred CCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCCeEE
Q 014177 119 FQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPERL 198 (429)
Q Consensus 119 ~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i 198 (429)
+.. ..++++|+++|++|+|++...... ..+++.++++|+++++++|++||++|+++.++++. ++++++.+
T Consensus 79 ~~~---~~i~ka~i~~gv~yvDts~~~~~~---~~~~~~a~~Agit~v~~~G~dPGi~nv~a~~a~~~----~~~~i~si 148 (389)
T COG1748 79 FVD---LTILKACIKTGVDYVDTSYYEEPP---WKLDEEAKKAGITAVLGCGFDPGITNVLAAYAAKE----LFDEIESI 148 (389)
T ss_pred hhh---HHHHHHHHHhCCCEEEcccCCchh---hhhhHHHHHcCeEEEcccCcCcchHHHHHHHHHHH----hhccccEE
Confidence 876 799999999999999999776542 46788999999999999999999999999999984 56699999
Q ss_pred EEEeeecCCCCCCcc------HHHHHHHHhCCceEEeeCCeEEEecCCCCCeeeecCCCceeeeEEeecCchhhhhhhhc
Q 014177 199 RFSYYTAGTGGAGPT------ILATSFLLLGEEVVAYNKGEEITLEPYSGMLSVDFGKGIGRKDVFLLNLPEVRSAREVL 272 (429)
Q Consensus 199 ~~~~~~~G~~~~g~~------~~~~~~~~~~~~~~v~~~G~~~~v~~~~~~~~~~fp~~~g~~~~~~~~~~e~~tl~~~~ 272 (429)
+++.+..|.++.++. ...+++.++.+|+.+|+||+|++++|++..+.++||. .|...+|.++|+|+.||.+++
T Consensus 149 ~iy~g~~g~~~~~~l~ya~tws~e~~l~e~~~p~~~~~~Gk~~~v~~~~~~~~~~~~~-~G~~~~y~~~~~el~sL~~~i 227 (389)
T COG1748 149 DIYVGGLGEHGDNPLGYATTWSPEINLREYTRPARYWENGKWVEVDPLEEREVFEFPV-IGYGDVYAFYHDELRSLVKTI 227 (389)
T ss_pred EEEEecCCCCCCCCccceeeecHHHhHHHhcCceEEEeCCEEEEecCcccccccccCC-CCceeEEecCCccHHHHHHhC
Confidence 996544444442222 1234678999999999999999999999999999986 789999999999999999999
Q ss_pred C-CCeEEEEcccChhhhhHHHHHhHhhcchhhccchhh--------hhhhhhcchhhhhhhcccCCcceEEEEEEEe-CC
Q 014177 273 G-VPTVSARFGTAPFFWNWGMVTMQRLFPAEYLRDRSK--------VQQLVQLFDPVVRAFDGIAGERVSMRVDLEC-TD 342 (429)
Q Consensus 273 ~-~~~v~~~~g~~~~~~~~~~~~~~~l~~~~ll~~~~~--------~~~l~~~~~~~~~~~~~~~~~~~~~~v~v~g-~d 342 (429)
+ ..+..+++++ +|++|++.++.|..+||++.+++ .+++..++....... ....+.+++.+.++| ||
T Consensus 228 ~~~~~~~~~~t~---r~~g~~~~i~~L~~lGll~~~~v~~~~~i~p~eflk~vl~~~~s~~-~~~~d~t~i~v~v~G~kd 303 (389)
T COG1748 228 PGVVRTRFEMTF---RYPGHLEVIKALRDLGLLSREPVKVQQEIVPLEFLKAVLPDPLSLA-PDYKDVTVIGVEVKGTKD 303 (389)
T ss_pred cccceeeEEeec---CcccHHHHHHHHHHcCCCcccccccccccchHHHHHHhcccccccC-CCcCceEEEEEEEEEEEc
Confidence 7 6677777654 78999999999999999988642 344433332222211 124678999999999 89
Q ss_pred CCceEEeee------------cCCcchhhhHHHHHHHHHHHcCC-CCCcccCCCCCCCcchhHHHHHHHHhhcCcchhhh
Q 014177 343 GRNTVGIFS------------HRRLSVSVGTAIAAFVLAVLEGA-TQPGVWFPEEPEGIAIEAREVLLKRASQGTINFVM 409 (429)
Q Consensus 343 G~~~~~~~~------------~~~~~~~T~~~~a~~a~~ll~G~-~~~Gv~~pe~~~~~~~~~~~~~l~~~~~~~~~~~~ 409 (429)
|+..+++|. .++++.+||.+++++|+++++|+ ..+||++||+++ | ++|++ ..+.
T Consensus 304 G~~~~~~y~~~~~~~~~~~~~~~ais~ttg~pa~~~a~ll~~g~~~~~Gv~~~E~l~--~----~~~~~-------~~~~ 370 (389)
T COG1748 304 GRDKTVFYNVKDHAEAYSEVGSSAISYTTGVPAAIGAELLAEGEWETPGVVNPEELG--P----DPFLE-------KLLI 370 (389)
T ss_pred CeeeEEEecchhhHHHhhccccceeehhccccHHHHHHHHHcCCCCcCcEecHHHhC--C----ChhHH-------HHhh
Confidence 997655444 36689999999999999999999 899999999998 6 77888 1222
Q ss_pred ccCCceeecC
Q 014177 410 NKAPWMVETE 419 (429)
Q Consensus 410 ~~~~~~~~~~ 419 (429)
+++||+.-++
T Consensus 371 ~~l~~~~~~~ 380 (389)
T COG1748 371 RGLPWRGVEN 380 (389)
T ss_pred ccCcchhccc
Confidence 4599987764
No 2
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=100.00 E-value=4.8e-38 Score=316.67 Aligned_cols=347 Identities=24% Similarity=0.315 Sum_probs=256.3
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHH-hCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVST-LGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~-l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+|+|| |++|+.+++.|+++. .. +|+++||+.++++++.+. ...+++.+++|+.|.+++.++++++|+||||+||+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~-~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~ 78 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRG-PFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF 78 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTT-CE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCC-CCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccc
Confidence 799999 999999999999974 45 999999999999998876 34689999999999999999999999999999998
Q ss_pred CCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCCeEEE
Q 014177 120 QQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPERLR 199 (429)
Q Consensus 120 ~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~ 199 (429)
.. .+++++|+++|+||+|.+. .......+++.++++|+.+++++|++||++++++.++++.+. ....+++.++
T Consensus 79 ~~---~~v~~~~i~~g~~yvD~~~---~~~~~~~l~~~a~~~g~~~l~~~G~~PGl~~~~a~~~~~~~~-~~~~~v~~~~ 151 (386)
T PF03435_consen 79 FG---EPVARACIEAGVHYVDTSY---VTEEMLALDEEAKEAGVTALPGCGFDPGLSNLLARYAADELD-AEGDEVESVD 151 (386)
T ss_dssp GH---HHHHHHHHHHT-EEEESS----HHHHHHHCHHHHHHTTSEEE-S-BTTTBHHHHHHHHHHHHHH-HTTHEEEEEE
T ss_pred hh---HHHHHHHHHhCCCeeccch---hHHHHHHHHHHHHhhCCEEEeCcccccchHHHHHHHHHHHhh-hhcccceEEE
Confidence 43 7999999999999999553 345566899999999999999999999999999999998765 2344677787
Q ss_pred EEeeecC--CC-C-CC-cc----HHHHHHHHhCCceEEeeCCeEEEecCCCCCeeeecCCCceeeeEEeecCchhhhhhh
Q 014177 200 FSYYTAG--TG-G-AG-PT----ILATSFLLLGEEVVAYNKGEEITLEPYSGMLSVDFGKGIGRKDVFLLNLPEVRSARE 270 (429)
Q Consensus 200 ~~~~~~G--~~-~-~g-~~----~~~~~~~~~~~~~~v~~~G~~~~v~~~~~~~~~~fp~~~g~~~~~~~~~~e~~tl~~ 270 (429)
+ ++..- +. . .+ .. .....+.++..|..+++||+++.+++++..+.++||.+++...++.+.+++..++++
T Consensus 152 ~-~~g~~~~p~~~~~~~~~~~~ws~~~~l~e~~~~~~~~~~G~~~~v~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 230 (386)
T PF03435_consen 152 I-YVGGLPAPEAPDNPLGYKFTWSPEGVLEEYSPPARVYRDGKWVEVPPFSEEERVDFPYPIGPGGAYEAFHPEDSTLTR 230 (386)
T ss_dssp E-EEEEEEEGCG--TTTSEEBSS-HHHHHHHHCS-EEEEETTEEEEEETTTTCCCETEEE-SSTTECEEEEEECBGTTHH
T ss_pred E-EEccccCCCCCCCCcccceeeeehhhHHhhcccceEeeCCEEEEecCccccceeeeeeEecccceeeeecCcCCceee
Confidence 5 44322 11 0 11 11 122355678889999999999999999999999999989998888888888888887
Q ss_pred hcC-CC---eEEEEcccChhhhhHHHHHhHhhcchhhccchhh------hhhhhhcchhhhhhhcccCCcceEEEEEEEe
Q 014177 271 VLG-VP---TVSARFGTAPFFWNWGMVTMQRLFPAEYLRDRSK------VQQLVQLFDPVVRAFDGIAGERVSMRVDLEC 340 (429)
Q Consensus 271 ~~~-~~---~v~~~~g~~~~~~~~~~~~~~~l~~~~ll~~~~~------~~~l~~~~~~~~~~~~~~~~~~~~~~v~v~g 340 (429)
.+. .+ ++..+ +.+|+++...++.+..++|++.++. .+.+..+..+..+.. +...|.+.++++++|
T Consensus 231 ~~~~~~~~~~~~~~----t~r~~~~~~~~~~l~~lgl~~~~~~~~~~~p~~~l~~~l~~~~~~~-~~~~d~~~~~v~v~G 305 (386)
T PF03435_consen 231 SFYGLPEVRNVIRK----TLRYPGFLNVMKLLKDLGLLSEEPVYVYVSPRDLLAALLEKRLRPG-PGERDMVVLRVEVEG 305 (386)
T ss_dssp HHTT-TTTSEEEEE----EEEETTHHHHHHHHHHTTTTSHCBEGGGSCHHHHHHHHHHHHSCTT-TT-SEEEEEEEEEEE
T ss_pred EeecCCCcccEEEE----EeeEhhHHHHHHHHHhhcccCCccccchhhHHHHHHhhChhhcCCc-ccccCceeEEEEEEE
Confidence 775 33 56545 6688999998988999999988763 333444433333221 124567889999998
Q ss_pred --CCCCceEEeee------------cCCcchhhhHHHHHHHHHHHcCC-CCCcccCCCCCCCcchhHHHHHHHHhhcCcc
Q 014177 341 --TDGRNTVGIFS------------HRRLSVSVGTAIAAFVLAVLEGA-TQPGVWFPEEPEGIAIEAREVLLKRASQGTI 405 (429)
Q Consensus 341 --~dG~~~~~~~~------------~~~~~~~T~~~~a~~a~~ll~G~-~~~Gv~~pe~~~~~~~~~~~~~l~~~~~~~~ 405 (429)
++|++....+. .++|+++||.+++++|+++++|+ ..+||++||++. .++-..++|+++....+
T Consensus 306 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~m~~~tg~~~ai~a~ll~~g~~~~~GV~~PE~~~--~~~~~~~~l~~l~~~GI 383 (386)
T PF03435_consen 306 WDKDGKPVRRTSYLVYPSGDPIETGGSAMARTTGIPAAIAAQLLADGEITRPGVVPPEAAF--DPDPFEDLLEELAKRGI 383 (386)
T ss_dssp EETTCEEEEEEEEEEEEEEECCCSSCHHHHHHHHHHHHHHHHHHHTTSSH-SEEE-SHHCC--SHHHHHHHHHHHHHHCE
T ss_pred EeCCCCEEEEEEeeceecccccCCCCCccHHHhhHHHHHHHHHHHCCCcCCCeEECHHHhC--CCchHHHHHHHHHcCCC
Confidence 68886532111 34589999999999999999999 699999999973 22333445665543344
No 3
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=99.97 E-value=1.3e-28 Score=267.39 Aligned_cols=348 Identities=18% Similarity=0.235 Sum_probs=259.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCce-------------EEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHH
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQ-------------IVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLL 103 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~-------------v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~ 103 (429)
-++++|+|+|+ |+||+.+++.|.+. ++++ |+++|++.++++++++.++ +++.+++|++|.+++.
T Consensus 567 ~~~~rIlVLGA-G~VG~~~a~~La~~-~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~-~~~~v~lDv~D~e~L~ 643 (1042)
T PLN02819 567 KKSQNVLILGA-GRVCRPAAEYLASV-KTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIE-NAEAVQLDVSDSESLL 643 (1042)
T ss_pred ccCCcEEEECC-CHHHHHHHHHHHhC-cCccccccccccccccEEEEECCCHHHHHHHHHhcC-CCceEEeecCCHHHHH
Confidence 35789999995 99999999999874 5555 8899999999888887663 5788999999999999
Q ss_pred HHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHH
Q 014177 104 MALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAEL 183 (429)
Q Consensus 104 ~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~ 183 (429)
++++++|+||+|+++... ..++++|+++|+|+++.+... .....+++.++++|+++++++|++||+.++++..+
T Consensus 644 ~~v~~~DaVIsalP~~~H---~~VAkaAieaGkHvv~eky~~---~e~~~L~e~Ak~AGV~~m~e~GlDPGid~~lA~~~ 717 (1042)
T PLN02819 644 KYVSQVDVVISLLPASCH---AVVAKACIELKKHLVTASYVS---EEMSALDSKAKEAGITILCEMGLDPGIDHMMAMKM 717 (1042)
T ss_pred HhhcCCCEEEECCCchhh---HHHHHHHHHcCCCEEECcCCH---HHHHHHHHHHHHcCCEEEECCccCHHHHHHHHHHH
Confidence 999999999999876543 799999999999999987332 35567889999999999999999999999999998
Q ss_pred HHHHHhhcCCCCeEEEEEeeecCCCC---C--CccHHHHH----HHHhCCceEEeeCCeEEEecC---CCCCeeeecCC-
Q 014177 184 VRVARNESKGEPERLRFSYYTAGTGG---A--GPTILATS----FLLLGEEVVAYNKGEEITLEP---YSGMLSVDFGK- 250 (429)
Q Consensus 184 ~~~~~~~~~~~v~~i~~~~~~~G~~~---~--g~~~~~~~----~~~~~~~~~v~~~G~~~~v~~---~~~~~~~~fp~- 250 (429)
+.... ..++++..++. ++++-|.+ . ..+.|+|+ +..+.+|.++++||+.+.+++ ++..+.++|+.
T Consensus 718 Id~~~-~~~GkI~s~~s-~~GGLP~pe~~~npL~YkfsWSp~gvi~~~~npa~~i~~G~~~~V~~~~l~~~~~~~~~~~~ 795 (1042)
T PLN02819 718 IDDAH-ERGGKVKSFTS-YCGGLPSPEAANNPLAYKFSWNPAGAIKAGQNPAVYKSNGQIIHVDGENLFASAVRFRLPNL 795 (1042)
T ss_pred HHhhc-ccCCcEEEEEE-EEcCccCcccCCCcccccccCCHHHHHHHhcCcceeeECCEEEEecchhhhhhccccccccC
Confidence 87653 23578888887 55433421 1 23456664 457888999999999999998 78888887753
Q ss_pred -CceeeeEEeecCchhhhhhhhcCCC-eEEEEcccChhhhhHHHHHhHhhcchhhccchhhh-----------hhhhh--
Q 014177 251 -GIGRKDVFLLNLPEVRSAREVLGVP-TVSARFGTAPFFWNWGMVTMQRLFPAEYLRDRSKV-----------QQLVQ-- 315 (429)
Q Consensus 251 -~~g~~~~~~~~~~e~~tl~~~~~~~-~v~~~~g~~~~~~~~~~~~~~~l~~~~ll~~~~~~-----------~~l~~-- 315 (429)
++ ..++|+ .-|.....+.++++ ++.+- -..+.||+++..+|+.|..+||+++++.. +.+..
T Consensus 796 p~~-~lE~~p--NRdSl~y~~~Ygi~~~a~tl-~RgTLRy~Gf~~~~~~l~~LGl~~~~~~~~~~~~~~~tw~~~~~~~l 871 (1042)
T PLN02819 796 PAF-ALECLP--NRDSLVYGELYGIEKEAATI-FRGTLRYEGFSMIMATLSKLGLFDSENHPLLSTGKRTTYGALLDALL 871 (1042)
T ss_pred CCc-ceEEcc--CCCcchhHHHhCCCccccee-eEEEEecCCHHHHHHHHHHcCCCCCCccccccCCCCCCHHHHHHHHh
Confidence 23 566664 34433344477765 44421 12278999999999999999998764210 00000
Q ss_pred ---------------------------------------------------------cchhhhhh------hcccCCcce
Q 014177 316 ---------------------------------------------------------LFDPVVRA------FDGIAGERV 332 (429)
Q Consensus 316 ---------------------------------------------------------~~~~~~~~------~~~~~~~~~ 332 (429)
.++-+... +.+.+.|.+
T Consensus 872 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgl~~~~~v~~~~~tp~d~l~~~Le~kl~y~~~e~DmV 951 (1042)
T PLN02819 872 LQDGHNENGPLAGEEEISKRLAKLGHSKNRETAAKAAKTIVFLGLDEETEVPKSCKSIFDVTCYRMEEKLAYSGNEQDMV 951 (1042)
T ss_pred CCCCcccccccccchhHHHHHHhhhcccchhhHHHHHHHhhhhcccccccccCCCCCHHHHHHHHHHHHhCCCCCCCeEE
Confidence 00111111 122456789
Q ss_pred EEEEEEEeC--CCCc-eEEeee------------cCCcchhhhHHHHHHHHHHHcCC-CCCcccCC---CCCCCcchhHH
Q 014177 333 SMRVDLECT--DGRN-TVGIFS------------HRRLSVSVGTAIAAFVLAVLEGA-TQPGVWFP---EEPEGIAIEAR 393 (429)
Q Consensus 333 ~~~v~v~g~--dG~~-~~~~~~------------~~~~~~~T~~~~a~~a~~ll~G~-~~~Gv~~p---e~~~~~~~~~~ 393 (429)
.|++++++. ||++ .+++++ +++|+++||+++|++|+++++|+ ..+||+.| |..
T Consensus 952 vl~h~~~~e~~~g~~~~~~t~tlv~~Gd~~~g~~~SAMAktVG~P~aiaa~lil~g~I~~~Gv~~P~~~eiy-------- 1023 (1042)
T PLN02819 952 LLHHEVEVEFPDSKRIEKHSATLLEFGEIKNGRTTTAMAKTVGIPAAIGALLLLEGKIKTRGVLRPLEPEVY-------- 1023 (1042)
T ss_pred EEEEEEEEEECCCCceEEEEEEEEEecCcCCCCcccHHHHhhcchHHHHHHHHhCCCcCCCeeeCCCCHHHh--------
Confidence 999999974 7776 443332 25699999999999999999999 78899999 444
Q ss_pred HHHHHHhhcCcchh
Q 014177 394 EVLLKRASQGTINF 407 (429)
Q Consensus 394 ~~~l~~~~~~~~~~ 407 (429)
.|.|+++.+.++.|
T Consensus 1024 ~p~l~~L~~~GI~~ 1037 (1042)
T PLN02819 1024 VPALEILQAYGIKL 1037 (1042)
T ss_pred HHHHHHHHHcCCce
Confidence 55899888776655
No 4
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=99.95 E-value=6.3e-26 Score=212.57 Aligned_cols=354 Identities=19% Similarity=0.189 Sum_probs=236.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
...++|.||+||.|..++++|..+ +....+++||..++.++...++... ...++-+++.+++.+.+.+||+||+||
T Consensus 6 e~d~iiYGAtGy~G~lvae~l~~~--g~~~aLAgRs~~kl~~l~~~LG~~~--~~~p~~~p~~~~~~~~~~~VVlncvGP 81 (382)
T COG3268 6 EYDIIIYGATGYAGGLVAEYLARE--GLTAALAGRSSAKLDALRASLGPEA--AVFPLGVPAALEAMASRTQVVLNCVGP 81 (382)
T ss_pred ceeEEEEccccchhHHHHHHHHHc--CCchhhccCCHHHHHHHHHhcCccc--cccCCCCHHHHHHHHhcceEEEecccc
Confidence 368999999999999999999997 7778999999999999999997544 444555588999999999999999999
Q ss_pred CCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHH-hhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCCeE
Q 014177 119 FQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAK-SFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPER 197 (429)
Q Consensus 119 ~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~-~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~ 197 (429)
|..++ .+++++|+.+|+||.|++++..+.+... .++.+++++|+.++++||++--.|.+-...+.++....-..++..
T Consensus 82 yt~~g-~plv~aC~~~GTdY~DiTGEi~~fe~~i~~yh~~A~~~Ga~Ii~~cGFDsIPsDl~v~~l~~~~~~d~~~~~~~ 160 (382)
T COG3268 82 YTRYG-EPLVAACAAAGTDYADITGEIMFFENSIDLYHAQAADAGARIIPGCGFDSIPSDLGVYALLKQALPDGTEELIA 160 (382)
T ss_pred ccccc-cHHHHHHHHhCCCeeeccccHHHHHHHHHHHHHHHHhcCCEEeccCCCCcCccchHHHHHHHhhCcccccchhh
Confidence 99888 6999999999999999999999888766 559999999999999999997777775555555443332333433
Q ss_pred EEEE--eeecCCCCCCccHHHHHHHHhCCceEEeeCCeEEEecCCCCCee---eecCCCceeeeEEeecCchhhhhhhhc
Q 014177 198 LRFS--YYTAGTGGAGPTILATSFLLLGEEVVAYNKGEEITLEPYSGMLS---VDFGKGIGRKDVFLLNLPEVRSAREVL 272 (429)
Q Consensus 198 i~~~--~~~~G~~~~g~~~~~~~~~~~~~~~~v~~~G~~~~v~~~~~~~~---~~fp~~~g~~~~~~~~~~e~~tl~~~~ 272 (429)
.++. +.. +.+-.+. .+.+..+.+.......++|+.+.+|..-..++ +|||.+.|.+.+-.+++|++.+...+.
T Consensus 161 t~l~l~s~t-~~g~S~G-Taat~~e~l~~~~~~~~~gr~~~~P~~~~~~r~~~iDf~~~rg~~~a~~~~Wg~V~a~~~t~ 238 (382)
T COG3268 161 THLALGSFT-GSGISGG-TAATSVEGLATAGKDPEAGRLLRVPYALKKRRGAEIDFPSRRGRRLAPTLPWGFVAAAFNTT 238 (382)
T ss_pred hheeeeecc-cCCcccc-cHHHHHHHHHhccCCcccCceeccCceeccCCCCCCCcccCCccccCcccCchhhhhhhccC
Confidence 3332 111 1121222 33455666666777889999999887655555 999988888888778889999988888
Q ss_pred CCC---eEEEEcccChhhhhHHHHHhHhhcchhhccchhhhhh-hhhcchhhhh----hhcc--cCCcceEEEEEEEeCC
Q 014177 273 GVP---TVSARFGTAPFFWNWGMVTMQRLFPAEYLRDRSKVQQ-LVQLFDPVVR----AFDG--IAGERVSMRVDLECTD 342 (429)
Q Consensus 273 ~~~---~v~~~~g~~~~~~~~~~~~~~~l~~~~ll~~~~~~~~-l~~~~~~~~~----~~~~--~~~~~~~~~v~v~g~d 342 (429)
.++ ++..|+- .++.+....+.+..+-.+-....+++ +..+.+.+.. ++.. .....+.+..+.+-.-
T Consensus 239 iv~rsn~l~~~~~----~~pv~~~a~~~~~~~~~ll~~~~~~~~~r~lv~r~~~k~g~GPt~e~qarg~~~~~~~~~tat 314 (382)
T COG3268 239 IVPRSNALEVWIY----AAPVLALAGRGIGALLPLLGSAYVRDLLRGLVLRVVPKPGTGPTEEAQARGRYTIEGETTTAT 314 (382)
T ss_pred ccccccceeeeec----hhHHHHHHHhccchhhhhhhhHHHhhhhHhhhheeccCCCCCCCHHHHhcCcceEEEEEEecc
Confidence 777 6655532 22222222222211111111111111 1111111111 1110 0112233444444344
Q ss_pred CCc-eEEeeecCCcchhhhHHHHHH-HHHHHcCC---CCCcccCCCCCCCcchhHHHHHHHHhhcCcchhhhc
Q 014177 343 GRN-TVGIFSHRRLSVSVGTAIAAF-VLAVLEGA---TQPGVWFPEEPEGIAIEAREVLLKRASQGTINFVMN 410 (429)
Q Consensus 343 G~~-~~~~~~~~~~~~~T~~~~a~~-a~~ll~G~---~~~Gv~~pe~~~~~~~~~~~~~l~~~~~~~~~~~~~ 410 (429)
|.+ ..++-+... +..|+...+.+ .++.++.. .+.||++|....| +.+++|+...++.|.+.
T Consensus 315 G~r~~ari~t~~~-y~stav~~a~~~l~~ald~~~~~~~gGv~TPA~~lG------~dlv~rLp~aGv~~~~~ 380 (382)
T COG3268 315 GERYTARITTDND-YYSTAVLLAQAALALALDRDKLSEPGGVLTPAAALG------ADLVERLPGAGVTFGTT 380 (382)
T ss_pred CCceeeEEecccc-hHHHHHHHHHHHHHHHhcCCcccCCCcccChHHHHh------HHHHHhcccccceeecc
Confidence 555 344444444 55566666644 44444444 5889999999874 56999999988887654
No 5
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.78 E-value=1.8e-18 Score=160.84 Aligned_cols=191 Identities=19% Similarity=0.196 Sum_probs=148.9
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC--chhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhc--CccEEEe
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN--REKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALR--DVDLVVH 114 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~--~~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~ 114 (429)
|++|||||+||||++.++.+++.+++.+|++.|.= ....+.+....+ ++..++++|+.|.+.+.++++ ++|+|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 58999999999999999999998888788888751 122333333232 478999999999999999998 6999999
Q ss_pred cCCCCCC---------------CchHHHHHHHHHcCC--cEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhH
Q 014177 115 AAGPFQQ---------------APKCTVLEAAIETKT--AYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSN 177 (429)
Q Consensus 115 ~agp~~~---------------~~~~~v~~aa~~~gv--~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~ 177 (429)
.|+-.+. .|+.+++|++++... +++.+|++..|...... +....+ ..+.-| .+.|.+||
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~-~~~FtE-~tp~~P--sSPYSASK 156 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLD-DDAFTE-TTPYNP--SSPYSASK 156 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCC-CCCccc-CCCCCC--CCCcchhh
Confidence 9986543 378999999999885 78999988877543221 001111 133333 35589999
Q ss_pred HHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHH--HHhCCceEEeeCCeEE
Q 014177 178 VMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSF--LLLGEEVVAYNKGEEI 235 (429)
Q Consensus 178 ~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~--~~~~~~~~v~~~G~~~ 235 (429)
..++++++.|.+.++.++...++ .++|||.+.....++-++ ...+.|.++|++|+++
T Consensus 157 AasD~lVray~~TYglp~~Itrc-SNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~i 215 (340)
T COG1088 157 AASDLLVRAYVRTYGLPATITRC-SNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQI 215 (340)
T ss_pred hhHHHHHHHHHHHcCCceEEecC-CCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcce
Confidence 99999999999999999999998 689999999887777544 3578999999999965
No 6
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=99.77 E-value=2.3e-18 Score=163.05 Aligned_cols=132 Identities=21% Similarity=0.339 Sum_probs=118.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhH--cCCCceEEEEecCchhHHHHHHHhC-------CCcEEEEeeCCChHHHHHHhcCcc
Q 014177 40 ARVLVLGGTGRVGGSTAVALSK--LCPDLQIVVGSRNREKGAAMVSTLG-------KNSEFAEVNIYNEGSLLMALRDVD 110 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~--~~~g~~v~v~~R~~~~~~~l~~~l~-------~~v~~~~~Dl~d~~~l~~~~~~~D 110 (429)
..++|+||+||.|..+++.+.+ ..++..+-+++||++|+++..+... ...-++.+|.+|++++.+..+++.
T Consensus 6 yDvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~ 85 (423)
T KOG2733|consen 6 YDVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQAR 85 (423)
T ss_pred eeEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhE
Confidence 5799999999999999999987 3347899999999999998876653 122378899999999999999999
Q ss_pred EEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHH-hhHHHHHHcCCcEEecCCCc
Q 014177 111 LVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAK-SFKDRAIAANIPAITTGGIY 172 (429)
Q Consensus 111 vVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~-~~~~~a~~~g~~~i~~~g~~ 172 (429)
+|+||+||+-..| .+++++|++.|+|++|+++++.|.+.++ .+++.|+++|+-++..|||+
T Consensus 86 vivN~vGPyR~hG-E~VVkacienG~~~vDISGEP~f~E~mq~kYhd~A~ekGVYIVsaCGfD 147 (423)
T KOG2733|consen 86 VIVNCVGPYRFHG-EPVVKACIENGTHHVDISGEPQFMERMQLKYHDLAKEKGVYIVSACGFD 147 (423)
T ss_pred EEEeccccceecC-cHHHHHHHHcCCceeccCCCHHHHHHHHHHHHHHHHhcCeEEEeecccC
Confidence 9999999998888 6999999999999999999999998765 89999999999999999998
No 7
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.71 E-value=1.7e-16 Score=157.88 Aligned_cols=189 Identities=15% Similarity=0.103 Sum_probs=132.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHH----HHHHhC----CCcEEEEeeCCChHHHHHHhcC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAA----MVSTLG----KNSEFAEVNIYNEGSLLMALRD 108 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~----l~~~l~----~~v~~~~~Dl~d~~~l~~~~~~ 108 (429)
|++|+|+||||+||+|+++++.|+++ +++|++.+|....... +....+ .++.++.+|+.|.+.+.+++++
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~ 90 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFL--NQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKN 90 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhC
Confidence 77899999999999999999999997 7899999986542221 111111 2577899999999999999999
Q ss_pred ccEEEecCCCCCC---------------CchHHHHHHHHHcCCc-EEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCC
Q 014177 109 VDLVVHAAGPFQQ---------------APKCTVLEAAIETKTA-YIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGI 171 (429)
Q Consensus 109 ~DvVi~~agp~~~---------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~ 171 (429)
+|+|||+|+.... .++.+++++|.+.+++ +|.+|+...|.... ....+. .+ .....
T Consensus 91 ~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~-----~~--~~p~~ 163 (348)
T PRK15181 91 VDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEE-----RI--GRPLS 163 (348)
T ss_pred CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCC-----CC--CCCCC
Confidence 9999999974321 2467999999999985 56666544443211 111111 01 11124
Q ss_pred ccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCc----cHHHHHHH--HhCCceEEeeCCeEE
Q 014177 172 YPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGP----TILATSFL--LLGEEVVAYNKGEEI 235 (429)
Q Consensus 172 ~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~----~~~~~~~~--~~~~~~~v~~~G~~~ 235 (429)
.||.||++++.+++.|.++++.++..+|+ ++.+||++... .+++..+. ..++++.++.+|+..
T Consensus 164 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~-~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~ 232 (348)
T PRK15181 164 PYAVTKYVNELYADVFARSYEFNAIGLRY-FNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTS 232 (348)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCCEEEEEe-cceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCce
Confidence 69999999999999888778899999998 78899875321 23343332 335677777777654
No 8
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.70 E-value=1.2e-16 Score=149.37 Aligned_cols=158 Identities=23% Similarity=0.272 Sum_probs=122.9
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAA 116 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~a 116 (429)
|+|||+||+|+|||+.+..|++. |++|++.|.-.. ..+.+.. . ..+++++|+.|.+.|++.++ ++|.|||.|
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~--G~~vvV~DNL~~g~~~~v~~-~--~~~f~~gDi~D~~~L~~vf~~~~idaViHFA 75 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKT--GHEVVVLDNLSNGHKIALLK-L--QFKFYEGDLLDRALLTAVFEENKIDAVVHFA 75 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHC--CCeEEEEecCCCCCHHHhhh-c--cCceEEeccccHHHHHHHHHhcCCCEEEECc
Confidence 58999999999999999999997 899999996433 2222221 1 15899999999999999997 799999999
Q ss_pred CCCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHHH--hhHHHHHHcCCcEEecCCCccchhHHH
Q 014177 117 GPFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRAK--SFKDRAIAANIPAITTGGIYPGVSNVM 179 (429)
Q Consensus 117 gp~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~--~~~~~a~~~g~~~i~~~g~~pG~s~~~ 179 (429)
+-... .|+..++++|.++|++.+.+|++...|.... ++.|..... .-..||.||+|
T Consensus 76 a~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~-------p~NPYG~sKlm 148 (329)
T COG1087 76 ASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLA-------PINPYGRSKLM 148 (329)
T ss_pred cccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCC-------CCCcchhHHHH
Confidence 74321 3689999999999999988888776554332 343332111 22459999999
Q ss_pred HHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 180 AAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 180 a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
.+++.+.+.+.+..+...+|+ ||..|..+.
T Consensus 149 ~E~iL~d~~~a~~~~~v~LRY-FN~aGA~~~ 178 (329)
T COG1087 149 SEEILRDAAKANPFKVVILRY-FNVAGACPD 178 (329)
T ss_pred HHHHHHHHHHhCCCcEEEEEe-cccccCCCC
Confidence 999999999888888899997 998886543
No 9
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.68 E-value=1e-15 Score=156.72 Aligned_cols=207 Identities=18% Similarity=0.164 Sum_probs=135.3
Q ss_pred ccccCCccC-CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch--------------------hHHHHHHH
Q 014177 26 TVLDGAHFQ-MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE--------------------KGAAMVST 84 (429)
Q Consensus 26 ~~~~~~~~~-~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~--------------------~~~~l~~~ 84 (429)
.-||..+.+ ...++|+||||||+||||+++++.|+++ |++|+++||... +++.+...
T Consensus 33 ~~~~~~~~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 110 (442)
T PLN02572 33 LATPSAPGSSSSSKKKKVMVIGGDGYCGWATALHLSKR--GYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV 110 (442)
T ss_pred ccCCCCCCCCccccCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeccccccccccccccccccccchHHHHHHHHHh
Confidence 334444433 3467889999999999999999999997 889999874211 01111111
Q ss_pred hCCCcEEEEeeCCChHHHHHHhc--CccEEEecCCCCCC------------------CchHHHHHHHHHcCC--cEEEeC
Q 014177 85 LGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAAGPFQQ------------------APKCTVLEAAIETKT--AYIDVC 142 (429)
Q Consensus 85 l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~agp~~~------------------~~~~~v~~aa~~~gv--~~vdis 142 (429)
...+++++.+|++|.+.+.++++ ++|+|||+|+.... .++.+++++|.+.|+ +.|.++
T Consensus 111 ~~~~v~~v~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~S 190 (442)
T PLN02572 111 SGKEIELYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLG 190 (442)
T ss_pred hCCcceEEECCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEe
Confidence 12358899999999999999888 58999999954210 246788999999986 456666
Q ss_pred CChhHHHHHHhhHHHH-------HHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCc---
Q 014177 143 DDTIYSQRAKSFKDRA-------IAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGP--- 212 (429)
Q Consensus 143 ~~~~~~~~~~~~~~~a-------~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~--- 212 (429)
+...|.....+.++.. .+...+........||.||++++.+++.+.++++.++..+|+ +++||+++...
T Consensus 191 S~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~-~~vyGp~~~~~~~~ 269 (442)
T PLN02572 191 TMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQ-GVVYGVRTDETMMD 269 (442)
T ss_pred cceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEec-ccccCCCCcccccc
Confidence 6555532111111110 000000011223469999999999999998888999999998 78899975431
Q ss_pred --------------cHHHHHHH--HhCCceEEeeCCeEE
Q 014177 213 --------------TILATSFL--LLGEEVVAYNKGEEI 235 (429)
Q Consensus 213 --------------~~~~~~~~--~~~~~~~v~~~G~~~ 235 (429)
..+...+. ..++++.++.+|++.
T Consensus 270 ~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~ 308 (442)
T PLN02572 270 EELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQT 308 (442)
T ss_pred cccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEE
Confidence 12222222 235677788887754
No 10
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=99.66 E-value=8.1e-16 Score=141.99 Aligned_cols=205 Identities=17% Similarity=0.183 Sum_probs=145.2
Q ss_pred ccccccccccccccCCccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh-C-CCcEEEE
Q 014177 16 MASATSATKETVLDGAHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL-G-KNSEFAE 93 (429)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l-~-~~v~~~~ 93 (429)
+.+..|--.++.-|.+ +++|+|+||+|||||++++.|..+ +++|+++|.-...-....... . .+++.+.
T Consensus 11 ~~~~~~~~~~~~~p~~-------~lrI~itGgaGFIgSHLvdkLm~e--gh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~ 81 (350)
T KOG1429|consen 11 APNNPSRLREQVKPSQ-------NLRILITGGAGFIGSHLVDKLMTE--GHEVIALDNYFTGRKENLEHWIGHPNFELIR 81 (350)
T ss_pred CCCCcchhhhcccCCC-------CcEEEEecCcchHHHHHHHHHHhc--CCeEEEEecccccchhhcchhccCcceeEEE
Confidence 4444555555554444 489999999999999999999987 789999986433322222222 1 4677787
Q ss_pred eeCCChHHHHHHhcCccEEEecCCCCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHHH-hhHHH
Q 014177 94 VNIYNEGSLLMALRDVDLVVHAAGPFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRAK-SFKDR 157 (429)
Q Consensus 94 ~Dl~d~~~l~~~~~~~DvVi~~agp~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~-~~~~~ 157 (429)
-|+.. .++..+|.|+|+|.|... .++.+++..|.+.+...+..|++..|..... +..+.
T Consensus 82 hdv~~-----pl~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ 156 (350)
T KOG1429|consen 82 HDVVE-----PLLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVET 156 (350)
T ss_pred eechh-----HHHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccc
Confidence 78744 477889999999976542 3678999999999988887776655543111 11111
Q ss_pred HHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC--CccHHHHHHH--HhCCceEEeeCCe
Q 014177 158 AIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA--GPTILATSFL--LLGEEVVAYNKGE 233 (429)
Q Consensus 158 a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~--g~~~~~~~~~--~~~~~~~v~~~G~ 233 (429)
. .|-..-++...+|+..|.+++.++..|.++.+.++...|+ |+.|||... +..+++.... ..++|+.+|+||+
T Consensus 157 y--wg~vnpigpr~cydegKr~aE~L~~~y~k~~giE~rIaRi-fNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~ 233 (350)
T KOG1429|consen 157 Y--WGNVNPIGPRSCYDEGKRVAETLCYAYHKQEGIEVRIARI-FNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGK 233 (350)
T ss_pred c--ccccCcCCchhhhhHHHHHHHHHHHHhhcccCcEEEEEee-ecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCc
Confidence 1 1222223555779999999999999999999999999999 999999853 4445443332 4578999999999
Q ss_pred EEEe
Q 014177 234 EITL 237 (429)
Q Consensus 234 ~~~v 237 (429)
+++.
T Consensus 234 qtRS 237 (350)
T KOG1429|consen 234 QTRS 237 (350)
T ss_pred ceEE
Confidence 7743
No 11
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.65 E-value=2.3e-15 Score=144.28 Aligned_cols=165 Identities=18% Similarity=0.186 Sum_probs=121.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHH--HHHHhC---CCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAA--MVSTLG---KNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~--l~~~l~---~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
.+++|+||||+||||+++++.|+++ ||.|....|+++..+. ....++ .+...+..|+.|.+++.+++++||.|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~r--GY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgV 82 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSR--GYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGV 82 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhC--CCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEE
Confidence 5689999999999999999999998 8999999999887443 233333 45889999999999999999999999
Q ss_pred EecCCCCCC--------------CchHHHHHHHHHcC-CcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCC-------
Q 014177 113 VHAAGPFQQ--------------APKCTVLEAAIETK-TAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGG------- 170 (429)
Q Consensus 113 i~~agp~~~--------------~~~~~v~~aa~~~g-v~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g------- 170 (429)
||+|.|+.. .|+.+++++|.+.. ++.|.++++..-....... .....++....
T Consensus 83 fH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~-----~~~~~vvdE~~wsd~~~~ 157 (327)
T KOG1502|consen 83 FHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPN-----IGENSVVDEESWSDLDFC 157 (327)
T ss_pred EEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcC-----CCCCcccccccCCcHHHH
Confidence 999988653 36789999999998 7777665554211100000 00001111111
Q ss_pred ----CccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 171 ----IYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 171 ----~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
+.|.+||.+++..+..+.++.+.....+... .+.||.-.
T Consensus 158 ~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~-lV~GP~l~ 200 (327)
T KOG1502|consen 158 RCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPG-LVFGPGLQ 200 (327)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCC-ceECCCcc
Confidence 4699999999999999998877776666663 35677643
No 12
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.64 E-value=3e-15 Score=148.76 Aligned_cols=192 Identities=14% Similarity=0.167 Sum_probs=130.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCC-ChHHHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIY-NEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~-d~~~l~~~~~~~DvVi~~ag 117 (429)
||+|+||||+||+|+++++.|++. .+++|++.+|+.++...+... .+++++.+|+. +.+.+.++++++|+|||+|+
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~-~~~~V~~~~r~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa 77 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILET-TDWEVYGMDMQTDRLGDLVNH--PRMHFFEGDITINKEWIEYHVKKCDVILPLVA 77 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhC-CCCeEEEEeCcHHHHHHhccC--CCeEEEeCCCCCCHHHHHHHHcCCCEEEECcc
Confidence 468999999999999999999975 258999999876654433221 35889999997 67788888899999999986
Q ss_pred CCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccchhHHHHH
Q 014177 118 PFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGVSNVMAA 181 (429)
Q Consensus 118 p~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~ 181 (429)
.... .++.+++++|.+.+.++|.+|+...|.... ..+.+........-.....+.||.||..++
T Consensus 78 ~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e 157 (347)
T PRK11908 78 IATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMD 157 (347)
T ss_pred cCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHH
Confidence 4321 235788999999988788888765553211 112221100000000112356999999999
Q ss_pred HHHHHHHhhcCCCCeEEEEEeeecCCCCCC--------ccHHHHHHH--HhCCceEEeeCCeE
Q 014177 182 ELVRVARNESKGEPERLRFSYYTAGTGGAG--------PTILATSFL--LLGEEVVAYNKGEE 234 (429)
Q Consensus 182 ~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g--------~~~~~~~~~--~~~~~~~v~~~G~~ 234 (429)
.++..+.++++.++..+|+ ++.+|++... ...+...+. ..+.++.++.+|+.
T Consensus 158 ~~~~~~~~~~~~~~~ilR~-~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~ 219 (347)
T PRK11908 158 RVIWAYGMEEGLNFTLFRP-FNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQ 219 (347)
T ss_pred HHHHHHHHHcCCCeEEEee-eeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCce
Confidence 9999887777888999998 6788986421 223433333 23556666666654
No 13
>PLN02427 UDP-apiose/xylose synthase
Probab=99.62 E-value=4.9e-15 Score=149.45 Aligned_cols=171 Identities=13% Similarity=0.142 Sum_probs=121.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHH----hCCCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVST----LGKNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~----l~~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
.+.|+||||||+||||+++++.|++++ +++|++++|+.++...+... ...+++++.+|+.|.+.+.++++++|+|
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~-g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~V 90 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTET-PHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLT 90 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcC-CCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEE
Confidence 456799999999999999999999862 48999999887765554321 1236889999999999999999999999
Q ss_pred EecCCCCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHHH-hhHHHH-----------HHcCCcE
Q 014177 113 VHAAGPFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRAK-SFKDRA-----------IAANIPA 165 (429)
Q Consensus 113 i~~agp~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~-~~~~~a-----------~~~g~~~ 165 (429)
||||+.... .++.+++++|.+.+.++|.+|+...|..... ...+.. .+...+.
T Consensus 91 iHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~ 170 (386)
T PLN02427 91 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPC 170 (386)
T ss_pred EEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcCCCCCccccccccccccccccccccc
Confidence 999974211 1356788999888877777776554422100 000000 0000000
Q ss_pred ----EecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 166 ----ITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 166 ----i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
+....+.||.||.+++.++..+.+.++.++..+|+ ++++|+++
T Consensus 171 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~-~~vyGp~~ 217 (386)
T PLN02427 171 IFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRP-FNWIGPRM 217 (386)
T ss_pred ccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecc-cceeCCCC
Confidence 00112469999999999999887777889999998 67889874
No 14
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.60 E-value=1.4e-14 Score=155.82 Aligned_cols=195 Identities=13% Similarity=0.150 Sum_probs=131.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHH-HHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGS-LLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~-l~~~~~~~DvVi~~ 115 (429)
+++|+|+||||+||||+++++.|+++ .+++|++.+|+......+.. ..+++++.+|++|.+. ++++++++|+|||+
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~-~g~~V~~l~r~~~~~~~~~~--~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHl 389 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRD-DNYEVYGLDIGSDAISRFLG--HPRFHFVEGDISIHSEWIEYHIKKCDVVLPL 389 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhC-CCcEEEEEeCCchhhhhhcC--CCceEEEeccccCcHHHHHHHhcCCCEEEEC
Confidence 56789999999999999999999984 26899999997754333221 1358899999998655 57788899999999
Q ss_pred CCCCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccchhHHH
Q 014177 116 AGPFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGVSNVM 179 (429)
Q Consensus 116 agp~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~s~~~ 179 (429)
|+.... .++.+++++|.+.+.++|.+|+...|.... ..++|.....-..-.....+.||.||.+
T Consensus 390 Aa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~ 469 (660)
T PRK08125 390 VAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQL 469 (660)
T ss_pred ccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHH
Confidence 974321 245788999999997778888765553211 1122211000000000112469999999
Q ss_pred HHHHHHHHHhhcCCCCeEEEEEeeecCCCCCC--------ccHHHHHHHH--hCCceEEeeCCeEE
Q 014177 180 AAELVRVARNESKGEPERLRFSYYTAGTGGAG--------PTILATSFLL--LGEEVVAYNKGEEI 235 (429)
Q Consensus 180 a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g--------~~~~~~~~~~--~~~~~~v~~~G~~~ 235 (429)
++.++..+.++++.++..+|+ ++++|+++.. ...+...+.. .++++.++.+|++.
T Consensus 470 ~E~~~~~~~~~~g~~~~ilR~-~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~ 534 (660)
T PRK08125 470 LDRVIWAYGEKEGLRFTLFRP-FNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQK 534 (660)
T ss_pred HHHHHHHHHHhcCCceEEEEE-ceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCcee
Confidence 999999988778889999998 6789987531 1233333322 24566666666543
No 15
>PLN02214 cinnamoyl-CoA reductase
Probab=99.55 E-value=3.6e-14 Score=140.80 Aligned_cols=170 Identities=14% Similarity=0.095 Sum_probs=121.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHH-HHHhC---CCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAM-VSTLG---KNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l-~~~l~---~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
.++++|+|+||+||||+++++.|+++ |++|++.+|+.++.... ...+. .+++++.+|++|.+++.++++++|+|
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V 85 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLER--GYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGV 85 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEE
Confidence 45789999999999999999999997 89999999987643211 11221 25788999999999999999999999
Q ss_pred EecCCCCCC----------CchHHHHHHHHHcCCcE-EEeCCChhHHHHHH-----hhHHHHHHcCCcEEecCCCccchh
Q 014177 113 VHAAGPFQQ----------APKCTVLEAAIETKTAY-IDVCDDTIYSQRAK-----SFKDRAIAANIPAITTGGIYPGVS 176 (429)
Q Consensus 113 i~~agp~~~----------~~~~~v~~aa~~~gv~~-vdis~~~~~~~~~~-----~~~~~a~~~g~~~i~~~g~~pG~s 176 (429)
||+|++... .++.+++++|.+.+++. |.+|+....+.... .++|..- ............|+.|
T Consensus 86 ih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~-~~~~~~~~p~~~Y~~s 164 (342)
T PLN02214 86 FHTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCW-SDLDFCKNTKNWYCYG 164 (342)
T ss_pred EEecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccC-CChhhccccccHHHHH
Confidence 999987543 24678899999999865 45554332322110 1222100 0000001122459999
Q ss_pred HHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 177 NVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 177 ~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
|+.++.++..+.++++.++..+|+ .+++|++..
T Consensus 165 K~~aE~~~~~~~~~~g~~~v~lRp-~~vyGp~~~ 197 (342)
T PLN02214 165 KMVAEQAAWETAKEKGVDLVVLNP-VLVLGPPLQ 197 (342)
T ss_pred HHHHHHHHHHHHHHcCCcEEEEeC-CceECCCCC
Confidence 999999999988777888999998 678998754
No 16
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.55 E-value=5.1e-14 Score=140.32 Aligned_cols=167 Identities=16% Similarity=0.160 Sum_probs=121.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
.+|+||||||+||||+++++.|+++ |++|++.+|+.++.+.+...+. .+++++.+|+.|.+.+.++++++|+|||+
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQR--GYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHV 86 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEEC
Confidence 4578999999999999999999997 8899999998776665544432 35788999999999999999999999999
Q ss_pred CCCCCC----------------------CchHHHHHHHHHcC-Cc-EEEeCCChhHHHHH------HhhHHHHHHcCCcE
Q 014177 116 AGPFQQ----------------------APKCTVLEAAIETK-TA-YIDVCDDTIYSQRA------KSFKDRAIAANIPA 165 (429)
Q Consensus 116 agp~~~----------------------~~~~~v~~aa~~~g-v~-~vdis~~~~~~~~~------~~~~~~a~~~g~~~ 165 (429)
|+.... .++.+++++|.+.+ +. .|.+|+...|.... ..++|.. ..+.
T Consensus 87 A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~---~~p~ 163 (353)
T PLN02896 87 AASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETC---QTPI 163 (353)
T ss_pred CccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCccc---CCcH
Confidence 975321 13456789988875 54 45566554443211 0111110 0010
Q ss_pred -----EecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 166 -----ITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 166 -----i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
.......||.||++++.++..|.++++.++..+|+ +++|||+..
T Consensus 164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~-~~vyGp~~~ 212 (353)
T PLN02896 164 DHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVIT-TTVAGPFLT 212 (353)
T ss_pred HHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcC-CcccCCCcC
Confidence 01122459999999999999998878889999998 788999764
No 17
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.55 E-value=4.6e-14 Score=136.00 Aligned_cols=164 Identities=21% Similarity=0.165 Sum_probs=109.1
Q ss_pred EEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHH-HHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCCCC
Q 014177 43 LVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGA-AMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQ 121 (429)
Q Consensus 43 lV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~-~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~ 121 (429)
|||||+||+|+++++.|+++++.++|.+.+++..... ...... +..+++++|++|.+++.++++++|+|||+|++...
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~-~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~ 79 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKS-GVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPP 79 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcc-cceeEEEeccccHHHHHHHhcCCceEEEeCccccc
Confidence 6999999999999999999843378999998765322 111111 22348999999999999999999999999975422
Q ss_pred --------------CchHHHHHHHHHcCCcEEEeCCCh-hHHHH--HHhhHHHHHHcCCcEEecCCCccchhHHHHHHHH
Q 014177 122 --------------APKCTVLEAAIETKTAYIDVCDDT-IYSQR--AKSFKDRAIAANIPAITTGGIYPGVSNVMAAELV 184 (429)
Q Consensus 122 --------------~~~~~v~~aa~~~gv~~vdis~~~-~~~~~--~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~ 184 (429)
.|+.+++++|.+.+++++..+++. .+... ...+...- + ..+.-......|+.||.+|+.++
T Consensus 80 ~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~d-E-~~~~~~~~~~~Y~~SK~~AE~~V 157 (280)
T PF01073_consen 80 WGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGD-E-DTPYPSSPLDPYAESKALAEKAV 157 (280)
T ss_pred cCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCC-c-CCcccccccCchHHHHHHHHHHH
Confidence 368899999999999986444333 22210 11111000 0 01111113345999999999998
Q ss_pred HHHHh---hcC--CCCeEEEEEeeecCCCCC
Q 014177 185 RVARN---ESK--GEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 185 ~~~~~---~~~--~~v~~i~~~~~~~G~~~~ 210 (429)
..+.. +.+ .....+|. ..++|++..
T Consensus 158 ~~a~~~~~~~g~~l~t~~lRP-~~IyGp~d~ 187 (280)
T PF01073_consen 158 LEANGSELKNGGRLRTCALRP-AGIYGPGDQ 187 (280)
T ss_pred HhhcccccccccceeEEEEec-cEEeCcccc
Confidence 87653 111 33456777 357888754
No 18
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.55 E-value=5.7e-14 Score=139.92 Aligned_cols=187 Identities=19% Similarity=0.230 Sum_probs=123.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCce-EEEEecCchh--HHHHHHHh-CCCcEEEEeeCCChHHHHHHhc--CccEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQ-IVVGSRNREK--GAAMVSTL-GKNSEFAEVNIYNEGSLLMALR--DVDLV 112 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~-v~v~~R~~~~--~~~l~~~l-~~~v~~~~~Dl~d~~~l~~~~~--~~DvV 112 (429)
|++||||||+||||+++++.|+++ +++ +++.+|.... ...+.... ..++.++.+|++|.+++.++++ ++|+|
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~--g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~V 78 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINE--TSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCV 78 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHc--CCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEE
Confidence 478999999999999999999997 665 4455554321 11221111 1257788999999999999988 48999
Q ss_pred EecCCCCCC---------------CchHHHHHHHHHc---------CC-cEEEeCCChhHHHHH---HhhHHHHHHcCCc
Q 014177 113 VHAAGPFQQ---------------APKCTVLEAAIET---------KT-AYIDVCDDTIYSQRA---KSFKDRAIAANIP 164 (429)
Q Consensus 113 i~~agp~~~---------------~~~~~v~~aa~~~---------gv-~~vdis~~~~~~~~~---~~~~~~a~~~g~~ 164 (429)
||||+.... .++.+++++|.+. ++ ++|.+|+...|.... ..+.|. .+
T Consensus 79 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~-----~~ 153 (355)
T PRK10217 79 MHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTET-----TP 153 (355)
T ss_pred EECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCC-----CC
Confidence 999986421 2467789999763 33 556676554442110 011111 11
Q ss_pred EEecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHHH--HhCCceEEeeCCeEE
Q 014177 165 AITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFL--LLGEEVVAYNKGEEI 235 (429)
Q Consensus 165 ~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~~--~~~~~~~v~~~G~~~ 235 (429)
. .....||.||..++.+++.+.++++.++..+|. .+.+||+......+...+. ..+.++.++.+|+..
T Consensus 154 ~--~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~-~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~ 223 (355)
T PRK10217 154 Y--APSSPYSASKASSDHLVRAWLRTYGLPTLITNC-SNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQI 223 (355)
T ss_pred C--CCCChhHHHHHHHHHHHHHHHHHhCCCeEEEee-eeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCee
Confidence 1 112459999999999999988778888999998 5678988654333333332 234566677777643
No 19
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.54 E-value=2.7e-13 Score=133.62 Aligned_cols=152 Identities=25% Similarity=0.277 Sum_probs=113.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+++|+|+|+||+|+||+++++.|++++.+++|++.+|+..+...+...+. .++.++++|++|.+.+.++++++|+|||+
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~ 81 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHA 81 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEEC
Confidence 46789999999999999999999987333789999998766555544443 35788999999999999999999999999
Q ss_pred CCCCCC---------------CchHHHHHHHHHcCCc-EEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHH
Q 014177 116 AGPFQQ---------------APKCTVLEAAIETKTA-YIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVM 179 (429)
Q Consensus 116 agp~~~---------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~ 179 (429)
||.... .++.+++++|.+.++. .|.+|+.... .+ -..||.||..
T Consensus 82 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~---------------~p-----~~~Y~~sK~~ 141 (324)
T TIGR03589 82 AALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAA---------------NP-----INLYGATKLA 141 (324)
T ss_pred cccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCC---------------CC-----CCHHHHHHHH
Confidence 985321 1456788888888764 4555543110 11 1349999999
Q ss_pred HHHHHHHHH---hhcCCCCeEEEEEeeecCCCC
Q 014177 180 AAELVRVAR---NESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 180 a~~~~~~~~---~~~~~~v~~i~~~~~~~G~~~ 209 (429)
++.+++.+. .+.+.++..+|. .+++|+++
T Consensus 142 ~E~l~~~~~~~~~~~gi~~~~lR~-g~v~G~~~ 173 (324)
T TIGR03589 142 SDKLFVAANNISGSKGTRFSVVRY-GNVVGSRG 173 (324)
T ss_pred HHHHHHHHHhhccccCcEEEEEee-cceeCCCC
Confidence 999987643 245677888887 56788764
No 20
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.54 E-value=2.9e-14 Score=141.47 Aligned_cols=160 Identities=11% Similarity=0.013 Sum_probs=114.4
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-----HHHHHHHh----CCCcEEEEeeCCChHHHHHHhc--C
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-----GAAMVSTL----GKNSEFAEVNIYNEGSLLMALR--D 108 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-----~~~l~~~l----~~~v~~~~~Dl~d~~~l~~~~~--~ 108 (429)
|+||||||+||||+++++.|++. |++|++.+|+.+. ++.+.+.. +.+++++++|++|.+++.++++ +
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~ 78 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEK--GYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIK 78 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHC--CCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCC
Confidence 58999999999999999999997 8999999987642 22222111 1357899999999999999988 4
Q ss_pred ccEEEecCCCCCC---------------CchHHHHHHHHHcCC----cEEEeCCChhHHHHH-HhhHHHHHHcCCcEEec
Q 014177 109 VDLVVHAAGPFQQ---------------APKCTVLEAAIETKT----AYIDVCDDTIYSQRA-KSFKDRAIAANIPAITT 168 (429)
Q Consensus 109 ~DvVi~~agp~~~---------------~~~~~v~~aa~~~gv----~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~ 168 (429)
+|+|||+|+.... .++.+++++|.+.++ ++|.+|+...|.... ...+|. .+. .
T Consensus 79 ~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~-----~~~--~ 151 (343)
T TIGR01472 79 PTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNET-----TPF--Y 151 (343)
T ss_pred CCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCC-----CCC--C
Confidence 6999999985321 146789999998875 467777655543211 011111 111 1
Q ss_pred CCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 169 GGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 169 ~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
....||.||..++.+++.+.++++.++...++ ++.+|++.
T Consensus 152 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~-~~~~gp~~ 191 (343)
T TIGR01472 152 PRSPYAAAKLYAHWITVNYREAYGLFAVNGIL-FNHESPRR 191 (343)
T ss_pred CCChhHHHHHHHHHHHHHHHHHhCCceEEEee-cccCCCCC
Confidence 23469999999999999988777766666676 66777753
No 21
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.54 E-value=6.7e-14 Score=140.37 Aligned_cols=187 Identities=19% Similarity=0.166 Sum_probs=125.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
.+|+|+|+||+||||+++++.|.++ |++|++++|..... +.. .....+++.+|++|.+.+.++++++|+|||+|+
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~--G~~V~~v~r~~~~~--~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa 94 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAE--GHYIIASDWKKNEH--MSE-DMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAA 94 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhC--CCEEEEEEeccccc--ccc-ccccceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence 4589999999999999999999997 89999999864321 111 111257788999999988888889999999996
Q ss_pred CCC----------------CCchHHHHHHHHHcCCc-EEEeCCChhHHHHHH-----hhHHHHHHcCCcEEecCCCccch
Q 014177 118 PFQ----------------QAPKCTVLEAAIETKTA-YIDVCDDTIYSQRAK-----SFKDRAIAANIPAITTGGIYPGV 175 (429)
Q Consensus 118 p~~----------------~~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~~-----~~~~~a~~~g~~~i~~~g~~pG~ 175 (429)
... ..++.+++++|.+.+++ +|.+|+...|..... .+.+. ...+. .....||.
T Consensus 95 ~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~---~~~p~--~p~s~Yg~ 169 (370)
T PLN02695 95 DMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKES---DAWPA--EPQDAYGL 169 (370)
T ss_pred ccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcc---cCCCC--CCCCHHHH
Confidence 531 01357899999999985 456665544421110 01110 00011 22346999
Q ss_pred hHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCC---c-cHHHHHHH---HhCCceEEeeCCeEE
Q 014177 176 SNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAG---P-TILATSFL---LLGEEVVAYNKGEEI 235 (429)
Q Consensus 176 s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g---~-~~~~~~~~---~~~~~~~v~~~G~~~ 235 (429)
+|..++.++..+.++++.++..+|+ ++.||+++.. . ......+. ....++.++.+|+..
T Consensus 170 sK~~~E~~~~~~~~~~g~~~~ilR~-~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~ 235 (370)
T PLN02695 170 EKLATEELCKHYTKDFGIECRIGRF-HNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQT 235 (370)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEE-CCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeE
Confidence 9999999999887777888999998 6789986531 1 11222221 124567777777643
No 22
>PLN02650 dihydroflavonol-4-reductase
Probab=99.54 E-value=6.4e-14 Score=139.47 Aligned_cols=168 Identities=15% Similarity=0.125 Sum_probs=119.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
.++||||||+||||+++++.|+++ |++|++.+|+.++...+..... .++.++.+|+.|.+.+.++++++|.||
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~Vi 82 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLLER--GYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVF 82 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHC--CCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEE
Confidence 478999999999999999999997 8899999998766554433211 247889999999999999999999999
Q ss_pred ecCCCCCC--------------CchHHHHHHHHHcC-Cc-EEEeCCChhHHHHHH--h-hHHHHHHcCC---cEEecCCC
Q 014177 114 HAAGPFQQ--------------APKCTVLEAAIETK-TA-YIDVCDDTIYSQRAK--S-FKDRAIAANI---PAITTGGI 171 (429)
Q Consensus 114 ~~agp~~~--------------~~~~~v~~aa~~~g-v~-~vdis~~~~~~~~~~--~-~~~~a~~~g~---~~i~~~g~ 171 (429)
|+|++... .++.+++++|.+.+ +. .|.+|+...++.... + +++... ... ......++
T Consensus 83 H~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~-~~~~~~~~~~~~~~ 161 (351)
T PLN02650 83 HVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCW-SDLDFCRRKKMTGW 161 (351)
T ss_pred EeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccC-Cchhhhhccccccc
Confidence 99975321 14577889999877 54 556665434432110 1 111100 000 00111234
Q ss_pred ccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 172 YPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 172 ~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
.||.||.+++.++..|.++++.++..+|+ ++++||+..
T Consensus 162 ~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp-~~v~Gp~~~ 199 (351)
T PLN02650 162 MYFVSKTLAEKAAWKYAAENGLDFISIIP-TLVVGPFIS 199 (351)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCeEEEECC-CceECCCCC
Confidence 69999999999999998888888899998 578998753
No 23
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.54 E-value=9.1e-14 Score=141.93 Aligned_cols=187 Identities=17% Similarity=0.189 Sum_probs=124.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-HHHHHHHhC-CCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-GAAMVSTLG-KNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+.|+|+||||+||||+++++.|+++ |++|++++|.... .+.+..... .+++++..|+.+. .+.++|+||||
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~--G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~-----~~~~~D~ViHl 191 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGR--GDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP-----ILLEVDQIYHL 191 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc-----cccCCCEEEEC
Confidence 3478999999999999999999997 8999999975321 122211111 3567788888664 34689999999
Q ss_pred CCCCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccchhHHH
Q 014177 116 AGPFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGVSNVM 179 (429)
Q Consensus 116 agp~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~s~~~ 179 (429)
|+.... .++.+++++|.+.++++|.+++...|.... ...+|..-....+ ......||.+|+.
T Consensus 192 Aa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p--~~p~s~Yg~SK~~ 269 (436)
T PLN02166 192 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQKETYWGNVNP--IGERSCYDEGKRT 269 (436)
T ss_pred ceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCCCCCCCCCccccccCCC--CCCCCchHHHHHH
Confidence 974321 246889999999999888887766553211 1122210000001 1123569999999
Q ss_pred HHHHHHHHHhhcCCCCeEEEEEeeecCCCCC--CccHHHHHHH--HhCCceEEeeCCeE
Q 014177 180 AAELVRVARNESKGEPERLRFSYYTAGTGGA--GPTILATSFL--LLGEEVVAYNKGEE 234 (429)
Q Consensus 180 a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~--g~~~~~~~~~--~~~~~~~v~~~G~~ 234 (429)
++.++..+.+.++.++..+|+ +++||+++. ....+...+. ..++++.++.+|+.
T Consensus 270 aE~~~~~y~~~~~l~~~ilR~-~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~ 327 (436)
T PLN02166 270 AETLAMDYHRGAGVEVRIARI-FNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQ 327 (436)
T ss_pred HHHHHHHHHHHhCCCeEEEEE-ccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCe
Confidence 999999988777888889998 678998753 1223333332 23566677777754
No 24
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.53 E-value=9.6e-14 Score=137.42 Aligned_cols=171 Identities=16% Similarity=0.126 Sum_probs=117.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHH--HhC--CCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVS--TLG--KNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~--~l~--~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
+++++|+||||+||||+++++.|+++ |++|++.+|+.+....... .+. ++++++.+|++|.+++.++++++|+|
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 84 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQK--GYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLV 84 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHC--CCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEE
Confidence 56789999999999999999999997 7899888887654432221 121 25788999999999999999999999
Q ss_pred EecCCCCCC--------------CchHHHHHHHHHc-CCc-EEEeCCChhHHHHH-----HhhHHHHHH--cCCcEEecC
Q 014177 113 VHAAGPFQQ--------------APKCTVLEAAIET-KTA-YIDVCDDTIYSQRA-----KSFKDRAIA--ANIPAITTG 169 (429)
Q Consensus 113 i~~agp~~~--------------~~~~~v~~aa~~~-gv~-~vdis~~~~~~~~~-----~~~~~~a~~--~g~~~i~~~ 169 (429)
||+|++... .++.+++++|.+. +++ .|.+|+...|.... ..+++.... .........
T Consensus 85 ih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p 164 (338)
T PLN00198 85 FHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPP 164 (338)
T ss_pred EEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCc
Confidence 999985321 1245678888776 454 45555544443210 011111000 000000112
Q ss_pred CCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 170 GIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 170 g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
...||.||.+++.++..|.++++.++..+|+ ++++|++..
T Consensus 165 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~-~~vyGp~~~ 204 (338)
T PLN00198 165 TWGYPASKTLAEKAAWKFAEENNIDLITVIP-TLMAGPSLT 204 (338)
T ss_pred cchhHHHHHHHHHHHHHHHHhcCceEEEEeC-CceECCCcc
Confidence 2459999999999999988778889999998 678999753
No 25
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.53 E-value=1.3e-13 Score=141.16 Aligned_cols=188 Identities=17% Similarity=0.179 Sum_probs=125.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-HHHHHHHhC-CCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-GAAMVSTLG-KNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+.|+|+||||+||||+++++.|+++ |++|++.+|.... .+.+...+. .+++++..|+.+. ++.++|+|||+
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~--G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~-----~l~~~D~ViHl 190 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMAR--GDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP-----ILLEVDQIYHL 190 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHC--cCEEEEEeCCCccchhhhhhhccCCceEEEECCccCh-----hhcCCCEEEEe
Confidence 4589999999999999999999997 8899998875332 122211121 3577888888664 34579999999
Q ss_pred CCCCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHHH-hhHHHHHHcCCcEEecCCCccchhHHH
Q 014177 116 AGPFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRAK-SFKDRAIAANIPAITTGGIYPGVSNVM 179 (429)
Q Consensus 116 agp~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~-~~~~~a~~~g~~~i~~~g~~pG~s~~~ 179 (429)
|+.... .++.+++++|.+.++++|.+++...|..... ..+|..-....+ +.....|+.+|..
T Consensus 191 Aa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P--~~~~s~Y~~SK~~ 268 (442)
T PLN02206 191 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQVETYWGNVNP--IGVRSCYDEGKRT 268 (442)
T ss_pred eeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHhCCCCCCCCCccccccCCC--CCccchHHHHHHH
Confidence 974321 2457899999999998888887665532111 111110000001 1123469999999
Q ss_pred HHHHHHHHHhhcCCCCeEEEEEeeecCCCCC--CccHHHHHHH--HhCCceEEeeCCeEE
Q 014177 180 AAELVRVARNESKGEPERLRFSYYTAGTGGA--GPTILATSFL--LLGEEVVAYNKGEEI 235 (429)
Q Consensus 180 a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~--g~~~~~~~~~--~~~~~~~v~~~G~~~ 235 (429)
++.++..|.++++.++..+|+ ++.||++.. ....+...+. ..++++.++.+|++.
T Consensus 269 aE~~~~~y~~~~g~~~~ilR~-~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~ 327 (442)
T PLN02206 269 AETLTMDYHRGANVEVRIARI-FNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 327 (442)
T ss_pred HHHHHHHHHHHhCCCeEEEEe-ccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEE
Confidence 999999887777888899998 678998742 2233333332 235677778887644
No 26
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.52 E-value=2.1e-13 Score=147.15 Aligned_cols=195 Identities=17% Similarity=0.163 Sum_probs=132.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc--hhHHHHHHH-hCCCcEEEEeeCCChHHHHHHh--cCccE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR--EKGAAMVST-LGKNSEFAEVNIYNEGSLLMAL--RDVDL 111 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~--~~~~~l~~~-l~~~v~~~~~Dl~d~~~l~~~~--~~~Dv 111 (429)
.++|+||||||+||||+++++.|++++++++|++.+|.. +....+... ...+++++.+|++|.+.+..++ .++|+
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~ 83 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDT 83 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCE
Confidence 566899999999999999999999875678999888742 222322211 1146889999999998887765 58999
Q ss_pred EEecCCCCCC---------------CchHHHHHHHHHcC-C-cEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccc
Q 014177 112 VVHAAGPFQQ---------------APKCTVLEAAIETK-T-AYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPG 174 (429)
Q Consensus 112 Vi~~agp~~~---------------~~~~~v~~aa~~~g-v-~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG 174 (429)
|||||+.... .++.+++++|.+.+ + ++|.+|+...|............+. .+.. ....||
T Consensus 84 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~-~~~~--p~~~Y~ 160 (668)
T PLN02260 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEA-SQLL--PTNPYS 160 (668)
T ss_pred EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCcccc-CCCC--CCCCcH
Confidence 9999986432 13567899999887 4 5677776554432110000000000 1111 235699
Q ss_pred hhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHHH--HhCCceEEeeCCeEE
Q 014177 175 VSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFL--LLGEEVVAYNKGEEI 235 (429)
Q Consensus 175 ~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~~--~~~~~~~v~~~G~~~ 235 (429)
.+|..++.++..+.+++..++..+|+ .++||+++.....+...+. ..+.++.++.+|+..
T Consensus 161 ~sK~~aE~~v~~~~~~~~l~~vilR~-~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~ 222 (668)
T PLN02260 161 ATKAGAEMLVMAYGRSYGLPVITTRG-NNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNV 222 (668)
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECc-ccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCce
Confidence 99999999999887777888889998 6789988654444443332 345677888888754
No 27
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.51 E-value=9.8e-14 Score=137.49 Aligned_cols=163 Identities=14% Similarity=0.021 Sum_probs=114.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-----HHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-----GAAMVSTL---GKNSEFAEVNIYNEGSLLMALR- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-----~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~- 107 (429)
+++++||||||+||||+++++.|+++ |++|++.+|+... ++.+.... +.++.++.+|++|.+++.++++
T Consensus 4 ~~~~~vlVTGatGfiG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 81 (340)
T PLN02653 4 PPRKVALITGITGQDGSYLTEFLLSK--GYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD 81 (340)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHC--CCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHH
Confidence 56789999999999999999999997 8999999886542 33222111 1347889999999999988887
Q ss_pred -CccEEEecCCCCCC---------------CchHHHHHHHHHcCC------cEEEeCCChhHHHHHHhhHHHHHHcCCcE
Q 014177 108 -DVDLVVHAAGPFQQ---------------APKCTVLEAAIETKT------AYIDVCDDTIYSQRAKSFKDRAIAANIPA 165 (429)
Q Consensus 108 -~~DvVi~~agp~~~---------------~~~~~v~~aa~~~gv------~~vdis~~~~~~~~~~~~~~~a~~~g~~~ 165 (429)
++|+|||||+.... .++.+++++|.+.++ ++|.+|+...|.....+..|. .+.
T Consensus 82 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~-----~~~ 156 (340)
T PLN02653 82 IKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSET-----TPF 156 (340)
T ss_pred cCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCC-----CCC
Confidence 47999999985321 245788999998886 466666554442211111111 111
Q ss_pred EecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 166 ITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 166 i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
.....||.||..++.+++.+.++++..+...++ ++.+||+.
T Consensus 157 --~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~-~~~~gp~~ 197 (340)
T PLN02653 157 --HPRSPYAVAKVAAHWYTVNYREAYGLFACNGIL-FNHESPRR 197 (340)
T ss_pred --CCCChhHHHHHHHHHHHHHHHHHcCCeEEEeee-ccccCCCC
Confidence 123459999999999999988777666666665 66777754
No 28
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.51 E-value=2.3e-13 Score=135.43 Aligned_cols=163 Identities=20% Similarity=0.162 Sum_probs=115.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh--CCCcEEEEeeCCChHHHHHHhc--CccEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL--GKNSEFAEVNIYNEGSLLMALR--DVDLV 112 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l--~~~v~~~~~Dl~d~~~l~~~~~--~~DvV 112 (429)
+++|+|+|+||+||||+++++.|+++ |++|++.+|+..........+ ..++.++.+|++|.+++.++++ ++|+|
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~v 79 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLEL--GAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIV 79 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHC--CCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEE
Confidence 56789999999999999999999997 789999998876544332222 2357789999999999999888 46999
Q ss_pred EecCCCCCC---------------CchHHHHHHHHHcC-Cc-EEEeCCChhHHHHH--HhhHHHHHHcCCcEEecCCCcc
Q 014177 113 VHAAGPFQQ---------------APKCTVLEAAIETK-TA-YIDVCDDTIYSQRA--KSFKDRAIAANIPAITTGGIYP 173 (429)
Q Consensus 113 i~~agp~~~---------------~~~~~v~~aa~~~g-v~-~vdis~~~~~~~~~--~~~~~~a~~~g~~~i~~~g~~p 173 (429)
||+|+.... .++.+++++|.+.+ +. .|.+|+...|.... ..+.+. .+ ...-..|
T Consensus 80 ih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~-----~~--~~p~~~Y 152 (349)
T TIGR02622 80 FHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRET-----DP--LGGHDPY 152 (349)
T ss_pred EECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccC-----CC--CCCCCcc
Confidence 999974211 24578889998776 54 55565544332110 011110 01 1112459
Q ss_pred chhHHHHHHHHHHHHhhc-------CCCCeEEEEEeeecCCCC
Q 014177 174 GVSNVMAAELVRVARNES-------KGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 174 G~s~~~a~~~~~~~~~~~-------~~~v~~i~~~~~~~G~~~ 209 (429)
|.||.+++.+++.+.+++ +.++..+|+ .+.||+++
T Consensus 153 ~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~-~~vyGp~~ 194 (349)
T TIGR02622 153 SSSKACAELVIASYRSSFFGVANFHGIKIASARA-GNVIGGGD 194 (349)
T ss_pred hhHHHHHHHHHHHHHHHhhcccccCCCcEEEEcc-CcccCCCc
Confidence 999999999998877554 667788898 67889865
No 29
>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]
Probab=99.51 E-value=1.3e-13 Score=132.56 Aligned_cols=346 Identities=18% Similarity=0.240 Sum_probs=219.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChH-HHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEG-SLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~-~l~~~~~~~DvVi~~ag 117 (429)
+++||++| +|||.+-+++.|.++ .+.+|+++.|....++++.+.. +++.+.+|+.|.+ .+++..+..|+|+.+.
T Consensus 2 ~~~vlllg-sg~v~~p~~d~ls~~-~dv~vtva~~~~~~~~~~~~~~--~~~av~ldv~~~~~~L~~~v~~~D~viSLl- 76 (445)
T KOG0172|consen 2 KKGVLLLG-SGFVSRPVADFLSRK-KDVNVTVASRTLKDAEALVKGI--NIKAVSLDVADEELALRKEVKPLDLVISLL- 76 (445)
T ss_pred CcceEEec-CccccchHHHHHhhc-CCceEEEehhhHHHHHHHhcCC--CccceEEEccchHHHHHhhhcccceeeeec-
Confidence 57899999 699999999999986 5789999999999888887654 3889999999988 8999999999999986
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCCeE
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPER 197 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~ 197 (429)
|+... .-++++|+..+.+.+..+.-. .....+.+.+..+|++++...|.+||+..+++........ +++..+.+
T Consensus 77 P~t~h--~lVaK~~i~~~~~~vtsSyv~---pe~~~L~~~~v~AG~ti~~e~gldpGidhm~a~~ti~~vh-~hgg~i~s 150 (445)
T KOG0172|consen 77 PYTFH--PLVAKGCIITKEDSVTSSYVD---PELEELEKAAVPAGSTIMNEIGLDPGIDHMPAMKTIDLVH-EHGGKIKS 150 (445)
T ss_pred cchhh--HHHHHHHHHhhcccccccccC---HHHHhhhhhccCCCceEecccccCcchhhhhhhccchHHH-hhcceeee
Confidence 44332 578889999988777433221 2445677888899999999999999999998887776554 56667777
Q ss_pred EEEEeeecCCCC----CC-ccHHHHHHH----HhCCceEEeeCCeEEEecCCC---CCeeeecCCCceeeeEEeecCchh
Q 014177 198 LRFSYYTAGTGG----AG-PTILATSFL----LLGEEVVAYNKGEEITLEPYS---GMLSVDFGKGIGRKDVFLLNLPEV 265 (429)
Q Consensus 198 i~~~~~~~G~~~----~g-~~~~~~~~~----~~~~~~~v~~~G~~~~v~~~~---~~~~~~fp~~~g~~~~~~~~~~e~ 265 (429)
+.- ||++-|.+ .+ .+.|.|.+. ....+...|.||+.+.+..-+ ...+++|-+++ ..++|+ .-|.
T Consensus 151 f~s-ycGglpape~s~nplgykfsws~~gvl~a~rnsAky~~~Gkiv~v~g~~~~~~~~~~~~~pg~-al~~yP--Nrds 226 (445)
T KOG0172|consen 151 FKS-YCGGLPAPERSNNPLGYKFSWSPLGVLLALRNSAKYYKNGKIVEVDGGDLADTATHYDFYPGP-ALECYP--NRDS 226 (445)
T ss_pred hhh-hcCCccChhhCCCCcceeeccchhhhhhhccccchhccCCeEEEeccccHHhhccCcccCccc-cccccC--Ccch
Confidence 664 56433322 11 345666543 456788899999999987541 12233332222 334442 2222
Q ss_pred hhhhhhcCCC-eEEEEcccChhhhhHHHHHhHhhcchhhccchhh--h---------h-------------------h--
Q 014177 266 RSAREVLGVP-TVSARFGTAPFFWNWGMVTMQRLFPAEYLRDRSK--V---------Q-------------------Q-- 312 (429)
Q Consensus 266 ~tl~~~~~~~-~v~~~~g~~~~~~~~~~~~~~~l~~~~ll~~~~~--~---------~-------------------~-- 312 (429)
--..+.++++ ...+-+ ..+.++++.+.++..|.++|++..+.. + + .
T Consensus 227 t~y~evy~I~~ea~til-rgtlryqgf~~~i~aL~~~G~~~~da~~~~~~~an~L~W~~~~~~~~g~~~~i~ed~i~~i~ 305 (445)
T KOG0172|consen 227 TEYSEVYGIPREAKTIL-RGTLRYQGFVLIIGALVRCGLLACDALEKFSIPANILTWKELLTSLGGPFSEIEEDDIKVIC 305 (445)
T ss_pred hhHHHHhcchHHHHHHH-hcccccccHHHHHHHHHHcCccchhhHhhcCCCCCcccHHHHHHhhcCCCcCccHHHHHHHH
Confidence 1122222332 111000 013355555555565666555543210 0 0 0
Q ss_pred -hhhcchh-hhhhh-------------------------------cccCCcceEEEEEEE--eCCCCceEEee-----e-
Q 014177 313 -LVQLFDP-VVRAF-------------------------------DGIAGERVSMRVDLE--CTDGRNTVGIF-----S- 351 (429)
Q Consensus 313 -l~~~~~~-~~~~~-------------------------------~~~~~~~~~~~v~v~--g~dG~~~~~~~-----~- 351 (429)
.....++ ..... ..-+.|...+++.+. ..+|+.+++.- .
T Consensus 306 ~~~~~~~~~~l~~~e~Lg~~~~k~v~~~~~~~DTl~~~l~~~l~y~~~e~Dmvvl~h~~~~~~p~g~~e~~t~~l~~yg~ 385 (445)
T KOG0172|consen 306 IYLSGKDPRILSTLEWLGLFSDKLVTVRGVSLDTLCPHLEEPLYYVDTEFDMVVLQHKFGTEPPEGKVESITHTLVLYGR 385 (445)
T ss_pred HHhhcCccchhhhhHhcCCCccccccccCCchhccccccccceeccCCccceeEEEecceeeCCCCceEEeeecHhhcCC
Confidence 0011110 00000 001234445555433 36777654322 2
Q ss_pred ---cCCcchhhhHHHHHHHHHHHcCC-CCCcccCCCCCCCcchhHHHHHHHHhhcCcc
Q 014177 352 ---HRRLSVSVGTAIAAFVLAVLEGA-TQPGVWFPEEPEGIAIEAREVLLKRASQGTI 405 (429)
Q Consensus 352 ---~~~~~~~T~~~~a~~a~~ll~G~-~~~Gv~~pe~~~~~~~~~~~~~l~~~~~~~~ 405 (429)
...|+.++++++|+.+.+++.|. ..+|++.|-... .-.|.|+++++-++
T Consensus 386 ~ng~samaktVg~p~ai~~~~~l~~~I~akgl~~p~~~e-----v~~p~l~~l~~~gi 438 (445)
T KOG0172|consen 386 ENGESAMAKTVGSPTAIAAKMLLDGWIRAKGLLRPMSAE-----VYRPALDRLKAYGI 438 (445)
T ss_pred ccchhHHHHhcCchHhhhhhhcccceeecccccchhhHH-----hhhHHHHHHHHhCc
Confidence 35589999999999999999999 789999885532 12568887775443
No 30
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.51 E-value=4e-14 Score=137.91 Aligned_cols=161 Identities=17% Similarity=0.171 Sum_probs=112.8
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ag 117 (429)
|+||||||+||||+++++.|.++ + +|++.+|... .+.+|++|.+.+.++++ ++|+|||||+
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~--g-~V~~~~~~~~--------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa 63 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPL--G-NLIALDVHST--------------DYCGDFSNPEGVAETVRKIRPDVIVNAAA 63 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhcc--C-CEEEeccccc--------------cccCCCCCHHHHHHHHHhcCCCEEEECCc
Confidence 48999999999999999999987 5 6887777531 24579999999999888 5899999997
Q ss_pred CCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccchhHHHHH
Q 014177 118 PFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGVSNVMAA 181 (429)
Q Consensus 118 p~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~ 181 (429)
.... .++.+++++|.+.|+++|.+|++..|.... .++.|. .+ +..-..||.||+.++
T Consensus 64 ~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~~~~~p~~E~-----~~--~~P~~~Yg~sK~~~E 136 (299)
T PRK09987 64 HTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPGTGDIPWQET-----DA--TAPLNVYGETKLAGE 136 (299)
T ss_pred cCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceEECCCCCCCcCCC-----CC--CCCCCHHHHHHHHHH
Confidence 6431 135678999999999988888776553211 122221 01 112245999999999
Q ss_pred HHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHHHH--hCCceEEeeC
Q 014177 182 ELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFLL--LGEEVVAYNK 231 (429)
Q Consensus 182 ~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~~~--~~~~~~v~~~ 231 (429)
.++..+. .+...+|+ ++.||+++. ..+...+.. .++++.++.+
T Consensus 137 ~~~~~~~----~~~~ilR~-~~vyGp~~~--~~~~~~~~~~~~~~~~~v~~d 181 (299)
T PRK09987 137 KALQEHC----AKHLIFRT-SWVYAGKGN--NFAKTMLRLAKEREELSVIND 181 (299)
T ss_pred HHHHHhC----CCEEEEec-ceecCCCCC--CHHHHHHHHHhcCCCeEEeCC
Confidence 9987653 35578898 578888653 233333332 2445666655
No 31
>PLN02686 cinnamoyl-CoA reductase
Probab=99.50 E-value=3.3e-13 Score=135.18 Aligned_cols=171 Identities=12% Similarity=0.084 Sum_probs=118.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh--------CCCcEEEEeeCCChHHHHHHhc
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL--------GKNSEFAEVNIYNEGSLLMALR 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l--------~~~v~~~~~Dl~d~~~l~~~~~ 107 (429)
.+++|+||||||+||||+++++.|+++ |++|++..|+.++.+.+.... ..++.++++|++|.+++.++++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~--G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~ 127 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRH--GYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD 127 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence 467899999999999999999999997 899998888876655543210 1247789999999999999999
Q ss_pred CccEEEecCCCCCC---------------CchHHHHHHHHHc-CCcEEEeCCChh--HHHH--HHh----hHHHHHHcCC
Q 014177 108 DVDLVVHAAGPFQQ---------------APKCTVLEAAIET-KTAYIDVCDDTI--YSQR--AKS----FKDRAIAANI 163 (429)
Q Consensus 108 ~~DvVi~~agp~~~---------------~~~~~v~~aa~~~-gv~~vdis~~~~--~~~~--~~~----~~~~a~~~g~ 163 (429)
++|.|||+++.... .++.+++++|.+. +++.+...++.. .+.. ... +++... ...
T Consensus 128 ~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~-~~~ 206 (367)
T PLN02686 128 GCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESW-SDE 206 (367)
T ss_pred hccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCC-CCh
Confidence 99999999874311 1356789999886 787654444431 1110 000 111000 000
Q ss_pred cEEecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 164 PAITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 164 ~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
.........||.||+.++.++..+.++++.++..+|+ ++++||+..
T Consensus 207 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp-~~vyGp~~~ 252 (367)
T PLN02686 207 SFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICP-ALVTGPGFF 252 (367)
T ss_pred hhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcC-CceECCCCC
Confidence 0001112349999999999999887777889999998 678999754
No 32
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.50 E-value=1.6e-13 Score=134.68 Aligned_cols=168 Identities=15% Similarity=0.133 Sum_probs=116.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHH--h---CCCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVST--L---GKNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~--l---~~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
++++||||||+||||+++++.|+++ |++|++.+|+.......... + .++++++++|+.|.+.+.++++++|+|
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 80 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQR--GYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGV 80 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHC--CCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEE
Confidence 4579999999999999999999997 88999999886643322111 1 136789999999999999999999999
Q ss_pred EecCCCCCC--------------CchHHHHHHHHHc-CCcE-EEeCCChhH-HH-HH----HhhHHHHHHcCCcE-EecC
Q 014177 113 VHAAGPFQQ--------------APKCTVLEAAIET-KTAY-IDVCDDTIY-SQ-RA----KSFKDRAIAANIPA-ITTG 169 (429)
Q Consensus 113 i~~agp~~~--------------~~~~~v~~aa~~~-gv~~-vdis~~~~~-~~-~~----~~~~~~a~~~g~~~-i~~~ 169 (429)
||+|++... .++.+++++|.+. +++. |.+|+...+ +. .. ..++|... ..+. ....
T Consensus 81 ih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~--~~p~~~~~~ 158 (322)
T PLN02662 81 FHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWF--SDPAFCEES 158 (322)
T ss_pred EEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccC--CChhHhhcc
Confidence 999986421 1346788888887 7755 455543332 21 10 01122100 0010 0011
Q ss_pred CCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 170 GIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 170 g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
...|+.+|.+++.++..+.++++.++..+|+ .+.+|+...
T Consensus 159 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp-~~v~Gp~~~ 198 (322)
T PLN02662 159 KLWYVLSKTLAEEAAWKFAKENGIDMVTINP-AMVIGPLLQ 198 (322)
T ss_pred cchHHHHHHHHHHHHHHHHHHcCCcEEEEeC-CcccCCCCC
Confidence 2459999999999999887778888999998 677888643
No 33
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.50 E-value=1.4e-13 Score=130.27 Aligned_cols=163 Identities=19% Similarity=0.191 Sum_probs=123.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec----CchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhc--Ccc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR----NREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALR--DVD 110 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R----~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~--~~D 110 (429)
.++||||||+||||++.+-+|+++ |+.|+++|. ..+.+.++...++ .++.+.++|+.|.+.|+++++ ++|
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~--gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd 79 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKR--GYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFD 79 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhC--CCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCc
Confidence 478999999999999999999998 899999884 3445555555555 579999999999999999998 799
Q ss_pred EEEecCCCCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHH--HhhHHHHHHcCCcEEecCCCcc
Q 014177 111 LVVHAAGPFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRA--KSFKDRAIAANIPAITTGGIYP 173 (429)
Q Consensus 111 vVi~~agp~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~--~~~~~~a~~~g~~~i~~~g~~p 173 (429)
.|+|.|+.... .|+.+++++|.+++++++..+++...+... .++.|..... .+-.-|
T Consensus 80 ~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~------~p~~py 153 (343)
T KOG1371|consen 80 AVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTD------QPTNPY 153 (343)
T ss_pred eEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCC------CCCCcc
Confidence 99999974321 368999999999998886555554333322 2333332211 122459
Q ss_pred chhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 174 GVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 174 G~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
|.+|.+.+.++..+...++..+..+|. |+.+|..+.
T Consensus 154 g~tK~~iE~i~~d~~~~~~~~~~~LRy-fn~~ga~p~ 189 (343)
T KOG1371|consen 154 GKTKKAIEEIIHDYNKAYGWKVTGLRY-FNVIGAHPS 189 (343)
T ss_pred hhhhHHHHHHHHhhhccccceEEEEEe-ccccCcccc
Confidence 999999999999998877777788887 787774443
No 34
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.49 E-value=2.3e-13 Score=127.05 Aligned_cols=181 Identities=23% Similarity=0.272 Sum_probs=129.1
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCc--cEEEecCCCC
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDV--DLVVHAAGPF 119 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~--DvVi~~agp~ 119 (429)
|||+||+||+|+++++.|+++ ++.|+...|+........... ++++..+|+.|.+.+.+++++. |+|||+|+..
T Consensus 1 IlI~GatG~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~~~--~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~ 76 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKK--GHEVIVLSRSSNSESFEEKKL--NVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFS 76 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHT--TTEEEEEESCSTGGHHHHHHT--TEEEEESETTSHHHHHHHHHHHTESEEEEEBSSS
T ss_pred EEEEccCCHHHHHHHHHHHHc--CCccccccccccccccccccc--eEEEEEeeccccccccccccccCceEEEEeeccc
Confidence 799999999999999999998 788887777766544333222 6899999999999999999855 9999999874
Q ss_pred CC---------------CchHHHHHHHHHcCC-cEEEeCCChhHHHH-HHhhHHHHHHcCCcEEecCCCccchhHHHHHH
Q 014177 120 QQ---------------APKCTVLEAAIETKT-AYIDVCDDTIYSQR-AKSFKDRAIAANIPAITTGGIYPGVSNVMAAE 182 (429)
Q Consensus 120 ~~---------------~~~~~v~~aa~~~gv-~~vdis~~~~~~~~-~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~ 182 (429)
.. .++.+++++|.+.++ +++.+++...|... ...+++. .+. .....|+.+|...+.
T Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~-----~~~--~~~~~Y~~~K~~~e~ 149 (236)
T PF01370_consen 77 SNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDED-----SPI--NPLSPYGASKRAAEE 149 (236)
T ss_dssp SHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETT-----SGC--CHSSHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----ccc--ccccccccccccccc
Confidence 21 235788999999998 66767665444322 1111211 111 112349999999999
Q ss_pred HHHHHHhhcCCCCeEEEEEeeecCCC---CCCccHHHHHHH--HhCCceEEeeCCeE
Q 014177 183 LVRVARNESKGEPERLRFSYYTAGTG---GAGPTILATSFL--LLGEEVVAYNKGEE 234 (429)
Q Consensus 183 ~~~~~~~~~~~~v~~i~~~~~~~G~~---~~g~~~~~~~~~--~~~~~~~v~~~G~~ 234 (429)
+++.+.++.+.++..+|+ ...+|+. ......+...+. ..++++.++.+|+.
T Consensus 150 ~~~~~~~~~~~~~~~~R~-~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (236)
T PF01370_consen 150 LLRDYAKKYGLRVTILRP-PNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQ 205 (236)
T ss_dssp HHHHHHHHHTSEEEEEEE-SEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSC
T ss_pred cccccccccccccccccc-cccccccccccccccccchhhHHhhcCCcccccCCCCC
Confidence 999998777888899998 5678988 222334443333 34666777777764
No 35
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.48 E-value=1.9e-13 Score=134.43 Aligned_cols=164 Identities=14% Similarity=0.098 Sum_probs=117.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh-----CCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL-----GKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l-----~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
+|+|||+||+||||+++++.|+++ |++|++.+|+.++.+...... ..+++++++|++|.+++.++++++|+||
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 82 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFR--GYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF 82 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHC--CCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence 589999999999999999999997 889998888876544332211 1357889999999999999999999999
Q ss_pred ecCCCCCC---------------CchHHHHHHHHHc-CC-cEEEeCCChhHHHHHH------hhHHHHHHcCCcEEe---
Q 014177 114 HAAGPFQQ---------------APKCTVLEAAIET-KT-AYIDVCDDTIYSQRAK------SFKDRAIAANIPAIT--- 167 (429)
Q Consensus 114 ~~agp~~~---------------~~~~~v~~aa~~~-gv-~~vdis~~~~~~~~~~------~~~~~a~~~g~~~i~--- 167 (429)
|+|++... .++.+++++|.+. ++ +.|.+|+...++.... .++|. .+.-+
T Consensus 83 h~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~-----~~~~p~~~ 157 (325)
T PLN02989 83 HTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDET-----FFTNPSFA 157 (325)
T ss_pred EeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcC-----CCCchhHh
Confidence 99985321 1356788888875 44 4566665444432110 11111 01101
Q ss_pred -cCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 168 -TGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 168 -~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
.....||.||..++.++..|.++++.++..+|+ ++++|++..
T Consensus 158 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~-~~vyGp~~~ 200 (325)
T PLN02989 158 EERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNP-GLVTGPILQ 200 (325)
T ss_pred cccccchHHHHHHHHHHHHHHHHHcCCeEEEEcC-CceeCCCCC
Confidence 012459999999999999888777888889998 678998764
No 36
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.48 E-value=2.3e-13 Score=133.74 Aligned_cols=168 Identities=15% Similarity=0.114 Sum_probs=117.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh-----CCCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL-----GKNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l-----~~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
.+++|+||||+||||+++++.|+++ |++|++..|+..+.+.+.... ..+++++.+|++|.+++.++++++|+|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v 81 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLR--GYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAV 81 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEE
Confidence 3579999999999999999999997 889998888876544332211 135789999999999999999999999
Q ss_pred EecCCCCCC--------------CchHHHHHHHHHc-CCcE-EEeCCChhHH-HHHH-----hhHHHHHHcCCcE-EecC
Q 014177 113 VHAAGPFQQ--------------APKCTVLEAAIET-KTAY-IDVCDDTIYS-QRAK-----SFKDRAIAANIPA-ITTG 169 (429)
Q Consensus 113 i~~agp~~~--------------~~~~~v~~aa~~~-gv~~-vdis~~~~~~-~~~~-----~~~~~a~~~g~~~-i~~~ 169 (429)
||+|++... .++.+++++|.+. +++. |.+|+...+. .... .+++... ..+. ....
T Consensus 82 ih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~--~~p~~~~~~ 159 (322)
T PLN02986 82 FHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFF--SDPSLCRET 159 (322)
T ss_pred EEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccC--CChHHhhcc
Confidence 999986421 2356788888885 6654 5555444331 1100 0111100 0000 0011
Q ss_pred CCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 170 GIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 170 g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
...|+.||.+++.++..|.++++.++..+|. .+++|+...
T Consensus 160 ~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp-~~v~Gp~~~ 199 (322)
T PLN02986 160 KNWYPLSKILAENAAWEFAKDNGIDMVVLNP-GFICGPLLQ 199 (322)
T ss_pred ccchHHHHHHHHHHHHHHHHHhCCeEEEEcc-cceeCCCCC
Confidence 2459999999999999988777888889998 567888643
No 37
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.48 E-value=3.5e-13 Score=128.18 Aligned_cols=146 Identities=25% Similarity=0.305 Sum_probs=103.3
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh----C-CCcEE----EEeeCCChHHHHHHhc--Ccc
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL----G-KNSEF----AEVNIYNEGSLLMALR--DVD 110 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l----~-~~v~~----~~~Dl~d~~~l~~~~~--~~D 110 (429)
||||||+|.||+.++++|++.+| .++++.||++.++-.+..++ + .++.+ +.+|+.|.+.+.++++ ++|
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p-~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pd 79 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP-KKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPD 79 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB--SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-S
T ss_pred CEEEccccHHHHHHHHHHHhcCC-CeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCC
Confidence 79999999999999999999754 58999999999888887776 2 23443 4789999999999999 999
Q ss_pred EEEecCCCCCC---------------CchHHHHHHHHHcCCcE-EEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccc
Q 014177 111 LVVHAAGPFQQ---------------APKCTVLEAAIETKTAY-IDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPG 174 (429)
Q Consensus 111 vVi~~agp~~~---------------~~~~~v~~aa~~~gv~~-vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG 174 (429)
+|||+|+.-+. .|+.+++++|.+++++. |.+|++-.. .|. ..+|
T Consensus 80 iVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv---------------~Pt-----nvmG 139 (293)
T PF02719_consen 80 IVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAV---------------NPT-----NVMG 139 (293)
T ss_dssp EEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCS---------------S-------SHHH
T ss_pred EEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccC---------------CCC-----cHHH
Confidence 99999985432 36899999999999965 566655321 122 4599
Q ss_pred hhHHHHHHHHHHHHhhc---CCCCeEEEEEeeecCCCC
Q 014177 175 VSNVMAAELVRVARNES---KGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 175 ~s~~~a~~~~~~~~~~~---~~~v~~i~~~~~~~G~~~ 209 (429)
.||.+++.++..+.+.. .-....+|+. |+.|+.+
T Consensus 140 atKrlaE~l~~~~~~~~~~~~t~f~~VRFG-NVlgS~G 176 (293)
T PF02719_consen 140 ATKRLAEKLVQAANQYSGNSDTKFSSVRFG-NVLGSRG 176 (293)
T ss_dssp HHHHHHHHHHHHHCCTSSSS--EEEEEEE--EETTGTT
T ss_pred HHHHHHHHHHHHHhhhCCCCCcEEEEEEec-ceecCCC
Confidence 99999999999877544 2234567763 5666554
No 38
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.44 E-value=1.6e-12 Score=131.43 Aligned_cols=153 Identities=25% Similarity=0.275 Sum_probs=117.0
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhcC-
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALRD- 108 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~~- 108 (429)
..+.+|+||||||+|.||+.+|+++++.+| .++++.+|++-+.-.+..++. .++.++.+|+.|.+.+.+++++
T Consensus 246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p-~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~ 324 (588)
T COG1086 246 AMLTGKTVLVTGGGGSIGSELCRQILKFNP-KEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH 324 (588)
T ss_pred hHcCCCEEEEeCCCCcHHHHHHHHHHhcCC-CEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC
Confidence 345789999999999999999999999865 489999999988777666554 3467889999999999999997
Q ss_pred -ccEEEecCCCCCC---------------CchHHHHHHHHHcCCcE-EEeCCChhHHHHHHhhHHHHHHcCCcEEecCCC
Q 014177 109 -VDLVVHAAGPFQQ---------------APKCTVLEAAIETKTAY-IDVCDDTIYSQRAKSFKDRAIAANIPAITTGGI 171 (429)
Q Consensus 109 -~DvVi~~agp~~~---------------~~~~~v~~aa~~~gv~~-vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~ 171 (429)
+|+|+|+|+.-+. .|+.+++++|.+.|++. |-+|++-.. .|. .
T Consensus 325 kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV---------------~Pt-----N 384 (588)
T COG1086 325 KVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAV---------------NPT-----N 384 (588)
T ss_pred CCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCccc---------------CCc-----h
Confidence 9999999974432 47899999999999977 455554321 122 4
Q ss_pred ccchhHHHHHHHHHHHHhhcCC---CCeEEEEEeeecCCCC
Q 014177 172 YPGVSNVMAAELVRVARNESKG---EPERLRFSYYTAGTGG 209 (429)
Q Consensus 172 ~pG~s~~~a~~~~~~~~~~~~~---~v~~i~~~~~~~G~~~ 209 (429)
.+|.||.+++.++..+.++... ....+|+ -|+-|+.+
T Consensus 385 vmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRF-GNVlGSrG 424 (588)
T COG1086 385 VMGATKRLAEKLFQAANRNVSGTGTRFCVVRF-GNVLGSRG 424 (588)
T ss_pred HhhHHHHHHHHHHHHHhhccCCCCcEEEEEEe-cceecCCC
Confidence 4999999999999988653332 3345555 24455444
No 39
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.44 E-value=1.5e-12 Score=126.89 Aligned_cols=186 Identities=19% Similarity=0.228 Sum_probs=123.1
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc--hhHHHHHHHh-CCCcEEEEeeCCChHHHHHHhcC--ccEEEec
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR--EKGAAMVSTL-GKNSEFAEVNIYNEGSLLMALRD--VDLVVHA 115 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~--~~~~~l~~~l-~~~v~~~~~Dl~d~~~l~~~~~~--~DvVi~~ 115 (429)
+|+||||+|++|+++++.|++++++++|++.+|.. .+.+.+.... ..+++++.+|++|.+++.+++++ +|+|||+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 58999999999999999999874347888887632 1112221111 13578899999999999999986 9999999
Q ss_pred CCCCCC---------------CchHHHHHHHHHc--CCcEEEeCCChhHHHHHH--hhHHHHHHcCCcEEecCCCccchh
Q 014177 116 AGPFQQ---------------APKCTVLEAAIET--KTAYIDVCDDTIYSQRAK--SFKDRAIAANIPAITTGGIYPGVS 176 (429)
Q Consensus 116 agp~~~---------------~~~~~v~~aa~~~--gv~~vdis~~~~~~~~~~--~~~~~a~~~g~~~i~~~g~~pG~s 176 (429)
|+.... .+..+++++|.+. +++++.+|+...|..... .+.+. .+. .....||.+
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~-----~~~--~~~~~Y~~s 153 (317)
T TIGR01181 81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTET-----TPL--APSSPYSAS 153 (317)
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCC-----CCC--CCCCchHHH
Confidence 986431 1245788889886 446777776544321100 11111 111 112459999
Q ss_pred HHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHHHH--hCCceEEeeCCeE
Q 014177 177 NVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFLL--LGEEVVAYNKGEE 234 (429)
Q Consensus 177 ~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~~~--~~~~~~v~~~G~~ 234 (429)
|..++.+++.+.++.+.++..+|. ...+|+.......+...+.. .+.++.++.+|+.
T Consensus 154 K~~~e~~~~~~~~~~~~~~~i~R~-~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 212 (317)
T TIGR01181 154 KAASDHLVRAYHRTYGLPALITRC-SNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQ 212 (317)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEe-ccccCCCCCcccHHHHHHHHHhcCCCceEeCCCce
Confidence 999999999887777888889998 45688875444444443332 2345566666653
No 40
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.43 E-value=2.4e-12 Score=128.09 Aligned_cols=189 Identities=16% Similarity=0.175 Sum_probs=120.3
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCce-EEEEecCc--hhHHHHHHHh-CCCcEEEEeeCCChHHHHHHhc--CccEEE
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQ-IVVGSRNR--EKGAAMVSTL-GKNSEFAEVNIYNEGSLLMALR--DVDLVV 113 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~-v~v~~R~~--~~~~~l~~~l-~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi 113 (429)
|+|+||||+||||+++++.|+++ +.+ ++..++.. ...+.+.... ..++.++.+|++|.+++.++++ ++|+||
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~--g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 78 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINN--TQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVM 78 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHh--CCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEE
Confidence 47999999999999999999997 544 55555432 1222222111 1346788999999999999887 489999
Q ss_pred ecCCCCCC---------------CchHHHHHHHHHc---------CC-cEEEeCCChhHHHHH--HhhHH-----HHHHc
Q 014177 114 HAAGPFQQ---------------APKCTVLEAAIET---------KT-AYIDVCDDTIYSQRA--KSFKD-----RAIAA 161 (429)
Q Consensus 114 ~~agp~~~---------------~~~~~v~~aa~~~---------gv-~~vdis~~~~~~~~~--~~~~~-----~a~~~ 161 (429)
|||+.... .++.+++++|.+. ++ ++|.+|+...|.... ....+ ...+.
T Consensus 79 h~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~ 158 (352)
T PRK10084 79 HLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTET 158 (352)
T ss_pred ECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCcccc
Confidence 99985421 1467889999874 33 466776655442210 00000 00001
Q ss_pred CCcEEecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHHHH--hCCceEEeeCCeE
Q 014177 162 NIPAITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFLL--LGEEVVAYNKGEE 234 (429)
Q Consensus 162 g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~~~--~~~~~~v~~~G~~ 234 (429)
.+. .....||.||..++.+++.+.++++.++..+|+ ..++|++......+...+.. .+.++.++.+|+.
T Consensus 159 -~~~--~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~-~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 229 (352)
T PRK10084 159 -TAY--APSSPYSASKASSDHLVRAWLRTYGLPTIVTNC-SNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQ 229 (352)
T ss_pred -CCC--CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEec-cceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCe
Confidence 111 223469999999999999887777888888888 56789875433333333222 2445666666653
No 41
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.42 E-value=1.2e-12 Score=127.55 Aligned_cols=159 Identities=20% Similarity=0.172 Sum_probs=117.6
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCc-cEEEecCCCC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDV-DLVVHAAGPF 119 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~-DvVi~~agp~ 119 (429)
+||||||+||||+++++.|.++ |++|+..+|...+..... ..+.++.+|++|.+.+.+.++.+ |+|||+|+..
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~ 75 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAA--GHDVRGLDRLRDGLDPLL----SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQS 75 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhC--CCeEEEEeCCCccccccc----cccceeeecccchHHHHHHHhcCCCEEEEccccC
Confidence 4999999999999999999997 899999999776544322 35788999999988888888888 9999999754
Q ss_pred CC----------------CchHHHHHHHHHcCCcEEEeCCChh-HHHHHH--hhHHHHHHcCCcEEecCCCccchhHHHH
Q 014177 120 QQ----------------APKCTVLEAAIETKTAYIDVCDDTI-YSQRAK--SFKDRAIAANIPAITTGGIYPGVSNVMA 180 (429)
Q Consensus 120 ~~----------------~~~~~v~~aa~~~gv~~vdis~~~~-~~~~~~--~~~~~a~~~g~~~i~~~g~~pG~s~~~a 180 (429)
.. .++.+++++|.+.+++.+..+++.. ++.... .+.|.. .+..+.. .||.||+.+
T Consensus 76 ~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~----~~~~p~~--~Yg~sK~~~ 149 (314)
T COG0451 76 SVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDL----GPPRPLN--PYGVSKLAA 149 (314)
T ss_pred chhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCccccc----CCCCCCC--HHHHHHHHH
Confidence 31 1367889999998887765554432 222100 122211 1222222 699999999
Q ss_pred HHHHHHHHhhcCCCCeEEEEEeeecCCCCCCc
Q 014177 181 AELVRVARNESKGEPERLRFSYYTAGTGGAGP 212 (429)
Q Consensus 181 ~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~ 212 (429)
+.++..+.+..+.++..+|.. ..+|++....
T Consensus 150 E~~~~~~~~~~~~~~~ilR~~-~vyGp~~~~~ 180 (314)
T COG0451 150 EQLLRAYARLYGLPVVILRPF-NVYGPGDKPD 180 (314)
T ss_pred HHHHHHHHHHhCCCeEEEeee-eeeCCCCCCC
Confidence 999999887677889999985 6789886553
No 42
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.39 E-value=3.5e-12 Score=116.97 Aligned_cols=157 Identities=17% Similarity=0.228 Sum_probs=109.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhc-------C
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
..+|.++||||++.||.++++.|.+. |++|++++|+.+++++++.+++ ..+....+|++|.++++++++ +
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~--G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~ 81 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEA--GAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGR 81 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHC--CCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCc
Confidence 45688999999999999999999997 8999999999999999999997 478899999999988666654 7
Q ss_pred ccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHH-HHHHcCCcEEecC---------CCccchhHH
Q 014177 109 VDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKD-RAIAANIPAITTG---------GIYPGVSNV 178 (429)
Q Consensus 109 ~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~-~a~~~g~~~i~~~---------g~~pG~s~~ 178 (429)
+|++||+||.... .++.++-.+.--..+|++-..-++....-+.. ..+..|..+.+++ |..|+.||+
T Consensus 82 iDiLvNNAGl~~g---~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~ 158 (246)
T COG4221 82 IDILVNNAGLALG---DPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKA 158 (246)
T ss_pred ccEEEecCCCCcC---ChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHH
Confidence 9999999997643 23333333333333433322222222222222 2233443333332 344999999
Q ss_pred HHHHHHHHHHhhcCCCCeEEEE
Q 014177 179 MAAELVRVARNESKGEPERLRF 200 (429)
Q Consensus 179 ~a~~~~~~~~~~~~~~v~~i~~ 200 (429)
+...+.+.++++.... .||+
T Consensus 159 aV~~fs~~LR~e~~g~--~IRV 178 (246)
T COG4221 159 AVRAFSLGLRQELAGT--GIRV 178 (246)
T ss_pred HHHHHHHHHHHHhcCC--CeeE
Confidence 9999999888765433 4554
No 43
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.38 E-value=2.9e-12 Score=120.56 Aligned_cols=82 Identities=18% Similarity=0.281 Sum_probs=72.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC----CcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK----NSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~----~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
.+++++++||||++.||..+++.|+++ |++|+++.|+.+++.++++++.. .++++.+|++|.+++..+.+
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~--g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~ 80 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARR--GYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKE 80 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHh
Confidence 367889999999999999999999998 89999999999999999988863 35889999999998887664
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
.+|++|||||..
T Consensus 81 ~~~~IdvLVNNAG~g 95 (265)
T COG0300 81 RGGPIDVLVNNAGFG 95 (265)
T ss_pred cCCcccEEEECCCcC
Confidence 599999999854
No 44
>PLN02240 UDP-glucose 4-epimerase
Probab=99.38 E-value=4.6e-12 Score=125.93 Aligned_cols=163 Identities=20% Similarity=0.278 Sum_probs=111.5
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhH----HHHHHH---hCCCcEEEEeeCCChHHHHHHhc-
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKG----AAMVST---LGKNSEFAEVNIYNEGSLLMALR- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~----~~l~~~---l~~~v~~~~~Dl~d~~~l~~~~~- 107 (429)
+|++++|+|+||+|++|+++++.|+++ +++|++.+|..... ..+... ...++.++.+|++|.+.+.++++
T Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~ 79 (352)
T PLN02240 2 SLMGRTILVTGGAGYIGSHTVLQLLLA--GYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAS 79 (352)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHh
Confidence 467789999999999999999999997 78999998753221 222221 12357889999999999988886
Q ss_pred -CccEEEecCCCCCC---------------CchHHHHHHHHHcCCc-EEEeCCChhHHHH-HHhhHHHHHHcCCcEEecC
Q 014177 108 -DVDLVVHAAGPFQQ---------------APKCTVLEAAIETKTA-YIDVCDDTIYSQR-AKSFKDRAIAANIPAITTG 169 (429)
Q Consensus 108 -~~DvVi~~agp~~~---------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~-~~~~~~~a~~~g~~~i~~~ 169 (429)
++|+|||||+.... .++.+++++|.+.+++ +|.+++...|... ...++|. .+. ..
T Consensus 80 ~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~-----~~~--~~ 152 (352)
T PLN02240 80 TRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEE-----FPL--SA 152 (352)
T ss_pred CCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCC-----CCC--CC
Confidence 68999999974321 1346788999888875 5666654333211 0112111 111 12
Q ss_pred CCccchhHHHHHHHHHHHHhh-cCCCCeEEEEEeeecCCC
Q 014177 170 GIYPGVSNVMAAELVRVARNE-SKGEPERLRFSYYTAGTG 208 (429)
Q Consensus 170 g~~pG~s~~~a~~~~~~~~~~-~~~~v~~i~~~~~~~G~~ 208 (429)
...||.+|..++.+++.+.++ ...++..+|+ ++.+|+.
T Consensus 153 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~-~~v~G~~ 191 (352)
T PLN02240 153 TNPYGRTKLFIEEICRDIHASDPEWKIILLRY-FNPVGAH 191 (352)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCCEEEEee-cCcCCCC
Confidence 245999999999999877543 3456677887 6777764
No 45
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=99.34 E-value=5.5e-12 Score=119.38 Aligned_cols=149 Identities=22% Similarity=0.326 Sum_probs=110.1
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ag 117 (429)
|+|||+|++|.+|+.+++.|. . +++|+..+|.. +|++|++.+.++++ ++|+|||||+
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~--~~~v~a~~~~~------------------~Ditd~~~v~~~i~~~~PDvVIn~AA 59 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-G--EFEVIATDRAE------------------LDITDPDAVLEVIRETRPDVVINAAA 59 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-C--CceEEeccCcc------------------ccccChHHHHHHHHhhCCCEEEECcc
Confidence 349999999999999999997 2 67888877642 79999999999988 6899999997
Q ss_pred CCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccchhHHHHH
Q 014177 118 PFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGVSNVMAA 181 (429)
Q Consensus 118 p~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~ 181 (429)
.... .+..+++++|.+.|..+|.+|++..|-... .++.|.-.. .|+ ..||.||++.+
T Consensus 60 yt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~D~~--~P~-----nvYG~sKl~GE 132 (281)
T COG1091 60 YTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKETDTP--NPL-----NVYGRSKLAGE 132 (281)
T ss_pred ccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCCCCCC--CCh-----hhhhHHHHHHH
Confidence 5432 246899999999999999999887664433 234332111 122 45999999999
Q ss_pred HHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHHHHhC
Q 014177 182 ELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFLLLG 223 (429)
Q Consensus 182 ~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~~~~~ 223 (429)
..++.+ .+....+|.++ .+|..+ ...+.++++...
T Consensus 133 ~~v~~~----~~~~~I~Rtsw-v~g~~g--~nFv~tml~la~ 167 (281)
T COG1091 133 EAVRAA----GPRHLILRTSW-VYGEYG--NNFVKTMLRLAK 167 (281)
T ss_pred HHHHHh----CCCEEEEEeee-eecCCC--CCHHHHHHHHhh
Confidence 999853 46777889865 466544 234445555443
No 46
>PLN02583 cinnamoyl-CoA reductase
Probab=99.32 E-value=2.2e-11 Score=118.48 Aligned_cols=167 Identities=13% Similarity=0.087 Sum_probs=112.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh--HHHHHHHh---CCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK--GAAMVSTL---GKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~--~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
+++|+||||+|+||+++++.|+++ |++|++.+|+..+ .......+ +.+++++++|++|.+++.+++.++|.|+
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~--G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~ 83 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSR--GYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLF 83 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEE
Confidence 468999999999999999999997 8999999986432 22222222 2357889999999999999999999999
Q ss_pred ecCCCCCC-------------CchHHHHHHHHHc-CCcE-EEeCCChhHH-H-HH----HhhHHHHHHcCCcEEecCCCc
Q 014177 114 HAAGPFQQ-------------APKCTVLEAAIET-KTAY-IDVCDDTIYS-Q-RA----KSFKDRAIAANIPAITTGGIY 172 (429)
Q Consensus 114 ~~agp~~~-------------~~~~~v~~aa~~~-gv~~-vdis~~~~~~-~-~~----~~~~~~a~~~g~~~i~~~g~~ 172 (429)
|++++... .++.+++++|.+. ++.. |.+++...+. . .. ..+++..- ............
T Consensus 84 ~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~-~~~~~~~~~~~~ 162 (297)
T PLN02583 84 CCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSW-SDQNFCRKFKLW 162 (297)
T ss_pred EeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccC-CCHHHHhhcccH
Confidence 98764321 2568889999886 4554 5555443321 1 00 01111100 000000001125
Q ss_pred cchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 173 PGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 173 pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
|+.||.+++.++..+.++.+.++..++. ..++|++.
T Consensus 163 Y~~sK~~aE~~~~~~~~~~gi~~v~lrp-~~v~Gp~~ 198 (297)
T PLN02583 163 HALAKTLSEKTAWALAMDRGVNMVSINA-GLLMGPSL 198 (297)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcEEEEcC-CcccCCCC
Confidence 9999999999998887666778888888 45678764
No 47
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.32 E-value=2.2e-11 Score=120.42 Aligned_cols=160 Identities=24% Similarity=0.340 Sum_probs=107.7
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHH---HHh-CCCcEEEEeeCCChHHHHHHhc--CccEEE
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMV---STL-GKNSEFAEVNIYNEGSLLMALR--DVDLVV 113 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~---~~l-~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi 113 (429)
|+|+|+||+|++|+++++.|+++ +++|++.+|......... ..+ +.++.++.+|++|.+.+.++++ ++|+||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vv 78 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQN--GHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVI 78 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHC--CCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEE
Confidence 57999999999999999999997 789998876433222111 112 2346788999999999988886 699999
Q ss_pred ecCCCCCC---------------CchHHHHHHHHHcCCcE-EEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccchh
Q 014177 114 HAAGPFQQ---------------APKCTVLEAAIETKTAY-IDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGVS 176 (429)
Q Consensus 114 ~~agp~~~---------------~~~~~v~~aa~~~gv~~-vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~s 176 (429)
|+|+.... .+..+++++|.+.+++. |.+++...|.... ..++|. .+. ......|+.+
T Consensus 79 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~-----~~~-~~p~~~Y~~s 152 (338)
T PRK10675 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVES-----FPT-GTPQSPYGKS 152 (338)
T ss_pred ECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccc-----cCC-CCCCChhHHH
Confidence 99974321 13467889999988865 4445433332110 012111 010 0123459999
Q ss_pred HHHHHHHHHHHHhhc-CCCCeEEEEEeeecCCC
Q 014177 177 NVMAAELVRVARNES-KGEPERLRFSYYTAGTG 208 (429)
Q Consensus 177 ~~~a~~~~~~~~~~~-~~~v~~i~~~~~~~G~~ 208 (429)
|..++.+++.+.++. ..++..+|+ ++.+|+.
T Consensus 153 K~~~E~~~~~~~~~~~~~~~~ilR~-~~v~g~~ 184 (338)
T PRK10675 153 KLMVEQILTDLQKAQPDWSIALLRY-FNPVGAH 184 (338)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEe-eeecCCC
Confidence 999999998876543 456778897 5677764
No 48
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.32 E-value=8.6e-12 Score=122.39 Aligned_cols=160 Identities=18% Similarity=0.137 Sum_probs=114.7
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+|+|+||+|++|+++++.|+++ +++|++.+|+.++...+. ...++++++|+.|.+++.++++++|+|||+++..
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~---~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~ 75 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQ--GEEVRVLVRPTSDRRNLE---GLDVEIVEGDLRDPASLRKAVAGCRALFHVAADY 75 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHC--CCEEEEEEecCccccccc---cCCceEEEeeCCCHHHHHHHHhCCCEEEEeceec
Confidence 47999999999999999999997 789999999876543322 1257899999999999999999999999999753
Q ss_pred CC-------------CchHHHHHHHHHcCCcE-EEeCCChhHHHHH--HhhHHHHHHcCCcEEec-CCCccchhHHHHHH
Q 014177 120 QQ-------------APKCTVLEAAIETKTAY-IDVCDDTIYSQRA--KSFKDRAIAANIPAITT-GGIYPGVSNVMAAE 182 (429)
Q Consensus 120 ~~-------------~~~~~v~~aa~~~gv~~-vdis~~~~~~~~~--~~~~~~a~~~g~~~i~~-~g~~pG~s~~~a~~ 182 (429)
.. .++.+++++|.+.++.. |.+++...|.... ..+.+. .+..+. .-..|+.+|..++.
T Consensus 76 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~-----~~~~~~~~~~~Y~~sK~~~e~ 150 (328)
T TIGR03466 76 RLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADET-----TPSSLDDMIGHYKRSKFLAEQ 150 (328)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCcc-----CCCCcccccChHHHHHHHHHH
Confidence 21 13467888999888754 5555444332111 011111 111111 11348999999999
Q ss_pred HHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 183 LVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 183 ~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
+++.+.++++.++..+|. .+.+|++..
T Consensus 151 ~~~~~~~~~~~~~~ilR~-~~~~G~~~~ 177 (328)
T TIGR03466 151 AALEMAAEKGLPVVIVNP-STPIGPRDI 177 (328)
T ss_pred HHHHHHHhcCCCEEEEeC-CccCCCCCC
Confidence 999887666778888887 567887754
No 49
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.31 E-value=4.2e-12 Score=123.97 Aligned_cols=152 Identities=17% Similarity=0.272 Sum_probs=98.6
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCCh---HH-HHHHh-----cCccEE
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNE---GS-LLMAL-----RDVDLV 112 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~---~~-l~~~~-----~~~DvV 112 (429)
|+||||+||||+++++.|++. |++++++.|+........ ....+|+.|. ++ +.+++ .++|+|
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~--g~~~v~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~V 72 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDGTKFV-------NLVDLDIADYMDKEDFLAQIMAGDDFGDIEAI 72 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhC--CCceEEEecCCCcchHHH-------hhhhhhhhhhhhHHHHHHHHhcccccCCccEE
Confidence 899999999999999999997 776555544433221111 1123445443 33 33333 269999
Q ss_pred EecCCCCCC-------------CchHHHHHHHHHcCCcEEEeCCChhHHHHHH-hhHHHHHHcCCcEEecCCCccchhHH
Q 014177 113 VHAAGPFQQ-------------APKCTVLEAAIETKTAYIDVCDDTIYSQRAK-SFKDRAIAANIPAITTGGIYPGVSNV 178 (429)
Q Consensus 113 i~~agp~~~-------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~-~~~~~a~~~g~~~i~~~g~~pG~s~~ 178 (429)
||||+.... .++.+++++|.+.+++.|.+|+...|..... ..++ . .+. ..-..||.||.
T Consensus 73 ih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~~~~~~~~E----~-~~~--~p~~~Y~~sK~ 145 (308)
T PRK11150 73 FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTDDFIEE----R-EYE--KPLNVYGYSKF 145 (308)
T ss_pred EECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCcCCCCCCcc----C-CCC--CCCCHHHHHHH
Confidence 999963211 1356899999999998777776655432111 1111 1 111 11235999999
Q ss_pred HHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 179 MAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 179 ~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
.++.+++.+..+.+.++..+|+ .+.+|+++.
T Consensus 146 ~~E~~~~~~~~~~~~~~~~lR~-~~vyG~~~~ 176 (308)
T PRK11150 146 LFDEYVRQILPEANSQICGFRY-FNVYGPREG 176 (308)
T ss_pred HHHHHHHHHHHHcCCCEEEEee-eeecCCCCC
Confidence 9999999887667788899998 578998753
No 50
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.30 E-value=2.9e-11 Score=114.70 Aligned_cols=165 Identities=15% Similarity=0.097 Sum_probs=111.7
Q ss_pred CccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh----CCC-cEEEEeeCCChHHHHHH
Q 014177 31 AHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL----GKN-SEFAEVNIYNEGSLLMA 105 (429)
Q Consensus 31 ~~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l----~~~-v~~~~~Dl~d~~~l~~~ 105 (429)
.-+.+.+.+|.|+||||+..||.++|..|+++ |.+++++.|+.++++.+.+++ ... +..+++|++|.+++.++
T Consensus 4 ~~~~e~~~~kvVvITGASsGIG~~lA~~la~~--G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~ 81 (282)
T KOG1205|consen 4 NLFMERLAGKVVLITGASSGIGEALAYELAKR--GAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKF 81 (282)
T ss_pred cccHHHhCCCEEEEeCCCcHHHHHHHHHHHhC--CCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHH
Confidence 34567789999999999999999999999998 888888888887777775443 234 88999999999998866
Q ss_pred h-------cCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHc-CCcEEecCC-------
Q 014177 106 L-------RDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAA-NIPAITTGG------- 170 (429)
Q Consensus 106 ~-------~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~-g~~~i~~~g------- 170 (429)
+ .++|++||+||.... + .+-..-.+.-.+.+|++-....+-....+....+.+ |-.+++++-
T Consensus 82 ~~~~~~~fg~vDvLVNNAG~~~~-~--~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P 158 (282)
T KOG1205|consen 82 VEWAIRHFGRVDVLVNNAGISLV-G--FLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLP 158 (282)
T ss_pred HHHHHHhcCCCCEEEecCccccc-c--ccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCC
Confidence 5 389999999997652 1 111111111112334432222222222333333333 666665532
Q ss_pred --CccchhHHHHHHHHHHHHhhcCCCCeEEEE
Q 014177 171 --IYPGVSNVMAAELVRVARNESKGEPERLRF 200 (429)
Q Consensus 171 --~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~ 200 (429)
..|..||.+...+.+.+++|+......+++
T Consensus 159 ~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i 190 (282)
T KOG1205|consen 159 FRSIYSASKHALEGFFETLRQELIPLGTIIII 190 (282)
T ss_pred cccccchHHHHHHHHHHHHHHHhhccCceEEE
Confidence 258899999999999999887766655654
No 51
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.30 E-value=6.5e-12 Score=121.54 Aligned_cols=158 Identities=20% Similarity=0.289 Sum_probs=105.0
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ag 117 (429)
|||||+|++|++|+++.+.|.++ +++++..+|+ .+|+.|.+++.+.++ ++|+|||||+
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~--~~~v~~~~r~------------------~~dl~d~~~~~~~~~~~~pd~Vin~aa 60 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKER--GYEVIATSRS------------------DLDLTDPEAVAKLLEAFKPDVVINCAA 60 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTT--SEEEEEESTT------------------CS-TTSHHHHHHHHHHH--SEEEE---
T ss_pred CEEEEECCCCHHHHHHHHHHhhC--CCEEEEeCch------------------hcCCCCHHHHHHHHHHhCCCeEeccce
Confidence 68999999999999999999986 7888888765 579999999999887 6999999997
Q ss_pred CCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHHH-hhHHHHHHcCCcEEecCCCccchhHHHHH
Q 014177 118 PFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRAK-SFKDRAIAANIPAITTGGIYPGVSNVMAA 181 (429)
Q Consensus 118 p~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~-~~~~~a~~~g~~~i~~~g~~pG~s~~~a~ 181 (429)
.... .+...++++|.+.|+++|.+|++..|..... ++.|.... ..-..||-+|+.++
T Consensus 61 ~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E~d~~-------~P~~~YG~~K~~~E 133 (286)
T PF04321_consen 61 YTNVDACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPYTEDDPP-------NPLNVYGRSKLEGE 133 (286)
T ss_dssp ---HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-TTS-----------SSHHHHHHHHHH
T ss_pred eecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccccccCCCC-------CCCCHHHHHHHHHH
Confidence 5421 2356889999999999999998877754322 34443211 12255999999999
Q ss_pred HHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHHHH--hCCceEEeeC
Q 014177 182 ELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFLL--LGEEVVAYNK 231 (429)
Q Consensus 182 ~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~~~--~~~~~~v~~~ 231 (429)
..++. .......+|..+ .+|+. +...+.+.+.. .++++.+..|
T Consensus 134 ~~v~~----~~~~~~IlR~~~-~~g~~--~~~~~~~~~~~~~~~~~i~~~~d 178 (286)
T PF04321_consen 134 QAVRA----ACPNALILRTSW-VYGPS--GRNFLRWLLRRLRQGEPIKLFDD 178 (286)
T ss_dssp HHHHH----H-SSEEEEEE-S-EESSS--SSSHHHHHHHHHHCTSEEEEESS
T ss_pred HHHHH----hcCCEEEEecce-ecccC--CCchhhhHHHHHhcCCeeEeeCC
Confidence 99875 345778999864 47763 33455555543 3444444443
No 52
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.29 E-value=2.9e-11 Score=118.73 Aligned_cols=99 Identities=20% Similarity=0.188 Sum_probs=80.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+|+|+||+||+|+++++.|+++ |++|++.+|+.++...+.. .+++++.+|++|++++.++++++|+|||+++..
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~--g~~V~~l~R~~~~~~~l~~---~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~ 75 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDE--GYQVRCLVRNLRKASFLKE---WGAELVYGDLSLPETLPPSFKGVTAIIDASTSR 75 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCeEEEEEcChHHhhhHhh---cCCEEEECCCCCHHHHHHHHCCCCEEEECCCCC
Confidence 48999999999999999999997 8999999998766543322 368999999999999999999999999998643
Q ss_pred CC----------CchHHHHHHHHHcCCcE-EEeCC
Q 014177 120 QQ----------APKCTVLEAAIETKTAY-IDVCD 143 (429)
Q Consensus 120 ~~----------~~~~~v~~aa~~~gv~~-vdis~ 143 (429)
.. .++.+++++|.++|++. |.+|+
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss 110 (317)
T CHL00194 76 PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSI 110 (317)
T ss_pred CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecc
Confidence 21 13468899999999865 44443
No 53
>PRK06194 hypothetical protein; Provisional
Probab=99.28 E-value=3.1e-11 Score=116.51 Aligned_cols=82 Identities=13% Similarity=0.122 Sum_probs=69.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
++++++|||||+|+||+++++.|+++ |++|++++|+.+++++..+++. .++.++.+|++|.++++++++
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 81 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAAL--GMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERF 81 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999997 8999999999887777665542 356779999999998888776
Q ss_pred -CccEEEecCCCCC
Q 014177 108 -DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 -~~DvVi~~agp~~ 120 (429)
++|+|||+||...
T Consensus 82 g~id~vi~~Ag~~~ 95 (287)
T PRK06194 82 GAVHLLFNNAGVGA 95 (287)
T ss_pred CCCCEEEECCCCCC
Confidence 4799999998643
No 54
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=99.27 E-value=1.7e-11 Score=113.68 Aligned_cols=192 Identities=19% Similarity=0.213 Sum_probs=141.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec---CchhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhc--CccE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR---NREKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALR--DVDL 111 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R---~~~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~--~~Dv 111 (429)
..++++|+||+||||+..+..+....|+.+++..|. ... ++.+.+... ++.++++.|+.+...+..++. .+|.
T Consensus 5 ~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~-~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~ 83 (331)
T KOG0747|consen 5 KEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN-LKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDT 83 (331)
T ss_pred ccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc-cchhhhhccCCCceEeeccccchHHHHhhhccCchhh
Confidence 348999999999999999999999888888777653 111 222222211 578999999999887777665 7999
Q ss_pred EEecCCCCCC---------------CchHHHHHHHHHcC-C-cEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccc
Q 014177 112 VVHAAGPFQQ---------------APKCTVLEAAIETK-T-AYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPG 174 (429)
Q Consensus 112 Vi~~agp~~~---------------~~~~~v~~aa~~~g-v-~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG 174 (429)
|+|.|+..+. .++..+++++...| + +++.+|++..|...-...... ++ . .+.....|.
T Consensus 84 vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~--E~-s--~~nPtnpyA 158 (331)
T KOG0747|consen 84 VIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVG--EA-S--LLNPTNPYA 158 (331)
T ss_pred hhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCcccccccc--cc-c--cCCCCCchH
Confidence 9999975432 24678899999885 3 458889888776432211110 11 1 123346689
Q ss_pred hhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHH--HHHHhCCceEEeeCCeEEE
Q 014177 175 VSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTILAT--SFLLLGEEVVAYNKGEEIT 236 (429)
Q Consensus 175 ~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~--~~~~~~~~~~v~~~G~~~~ 236 (429)
.||+.++.+.+.|.++++.++..+|. -++|||++....+++- .+.+.+.+..+.++|..++
T Consensus 159 asKaAaE~~v~Sy~~sy~lpvv~~R~-nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~r 221 (331)
T KOG0747|consen 159 ASKAAAEMLVRSYGRSYGLPVVTTRM-NNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTR 221 (331)
T ss_pred HHHHHHHHHHHHHhhccCCcEEEEec-cCccCCCcChHHHhHHHHHHHHhCCCcceecCcccce
Confidence 99999999999999999999999998 5899999987666653 3346688899999998664
No 55
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.25 E-value=1.9e-10 Score=116.15 Aligned_cols=104 Identities=20% Similarity=0.226 Sum_probs=80.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHH------HHHHHhCCCcEEEEeeCCChHHHHHHhc---
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGA------AMVSTLGKNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~------~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
..+++|+|+||+|+||+++++.|+++ |++|++.+|+..+.+ ..... ..+++++++|++|.+++.++++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~~~~-~~~v~~v~~Dl~d~~~l~~~~~~~~ 134 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRR--GYNVVAVAREKSGIRGKNGKEDTKKE-LPGAEVVFGDVTDADSLRKVLFSEG 134 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEEechhhccccchhhHHhhh-cCCceEEEeeCCCHHHHHHHHHHhC
Confidence 35689999999999999999999997 899999999876432 11111 2468899999999999999888
Q ss_pred -CccEEEecCCCCCC----------CchHHHHHHHHHcCCc-EEEeCC
Q 014177 108 -DVDLVVHAAGPFQQ----------APKCTVLEAAIETKTA-YIDVCD 143 (429)
Q Consensus 108 -~~DvVi~~agp~~~----------~~~~~v~~aa~~~gv~-~vdis~ 143 (429)
++|+||||+++... .++.+++++|.+.|++ +|.+|+
T Consensus 135 ~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS 182 (390)
T PLN02657 135 DPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSA 182 (390)
T ss_pred CCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 59999999875321 1346788999999886 455554
No 56
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=99.25 E-value=6e-11 Score=116.17 Aligned_cols=169 Identities=20% Similarity=0.166 Sum_probs=113.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
.++.+++||||+||+|+++++.|.++....+|.++|..+.......+.. ..+++..++|+.|...+.+++.++ .|+
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv 80 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVV 80 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEE
Confidence 3567899999999999999999999855689999998765322222222 357899999999999999999999 777
Q ss_pred ecCC-CCCC--------------CchHHHHHHHHHcCCcEE-EeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhH
Q 014177 114 HAAG-PFQQ--------------APKCTVLEAAIETKTAYI-DVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSN 177 (429)
Q Consensus 114 ~~ag-p~~~--------------~~~~~v~~aa~~~gv~~v-dis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~ 177 (429)
|||. +... .|+.+++++|.+.|++.+ .+|+........ .....-+....+. .---.|+-||
T Consensus 81 h~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~-~~~n~~E~~p~p~--~~~d~Y~~sK 157 (361)
T KOG1430|consen 81 HCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGE-PIINGDESLPYPL--KHIDPYGESK 157 (361)
T ss_pred EeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCe-ecccCCCCCCCcc--ccccccchHH
Confidence 7763 3211 367899999999999885 444333221111 0000000111221 0002499999
Q ss_pred HHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 178 VMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 178 ~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
..++.++.............+|.. ..||++..
T Consensus 158 a~aE~~Vl~an~~~~l~T~aLR~~-~IYGpgd~ 189 (361)
T KOG1430|consen 158 ALAEKLVLEANGSDDLYTCALRPP-GIYGPGDK 189 (361)
T ss_pred HHHHHHHHHhcCCCCeeEEEEccc-cccCCCCc
Confidence 999999987653222345678874 46898864
No 57
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.25 E-value=1.2e-10 Score=111.74 Aligned_cols=79 Identities=13% Similarity=0.180 Sum_probs=68.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------CccE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DVDL 111 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~Dv 111 (429)
.|++|||||+|+||+++++.|+++ |++|++.+|+.++++.+.+..+.++.++++|++|.+++.++++ ++|+
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLAR--GDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDV 79 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 478999999999999999999997 7899999999988887776655678899999999998877654 5899
Q ss_pred EEecCCCC
Q 014177 112 VVHAAGPF 119 (429)
Q Consensus 112 Vi~~agp~ 119 (429)
||||+|..
T Consensus 80 vi~~ag~~ 87 (276)
T PRK06482 80 VVSNAGYG 87 (276)
T ss_pred EEECCCCC
Confidence 99999864
No 58
>PRK05717 oxidoreductase; Validated
Probab=99.23 E-value=8.2e-11 Score=111.59 Aligned_cols=81 Identities=23% Similarity=0.348 Sum_probs=68.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
+++|+++|+||+|+||+++++.|+++ |++|++.+|+.++.+.+.+.++.++.++++|++|.+++.++++ ++
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 85 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAE--GWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRL 85 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 56789999999999999999999997 7899999998887777666555567889999999988766544 47
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|+|||++|..
T Consensus 86 d~li~~ag~~ 95 (255)
T PRK05717 86 DALVCNAAIA 95 (255)
T ss_pred CEEEECCCcc
Confidence 9999999854
No 59
>PLN02253 xanthoxin dehydrogenase
Probab=99.21 E-value=1.3e-10 Score=111.70 Aligned_cols=82 Identities=22% Similarity=0.319 Sum_probs=70.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhc------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
.+++|+++|+||+|+||+++++.|+++ |++|++.+|+.++.+++.+.+. .++.++++|++|.+++.++++
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 92 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKH--GAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKF 92 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence 467889999999999999999999997 8999999998877777666553 357889999999998888776
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 93 g~id~li~~Ag~~ 105 (280)
T PLN02253 93 GTLDIMVNNAGLT 105 (280)
T ss_pred CCCCEEEECCCcC
Confidence 689999999853
No 60
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.20 E-value=4.3e-10 Score=107.16 Aligned_cols=81 Identities=16% Similarity=0.181 Sum_probs=69.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
+++++++|+||+|+||+++++.|+++ |++|++.+|+.++++++.+..+.++..+++|+.|.+++.++++ ++
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAE--GARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKI 80 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 56789999999999999999999997 8999999999888887766554567889999999887776664 57
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|++|||||..
T Consensus 81 d~li~~Ag~~ 90 (262)
T TIGR03325 81 DCLIPNAGIW 90 (262)
T ss_pred CEEEECCCCC
Confidence 9999999864
No 61
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=99.20 E-value=7.9e-11 Score=114.54 Aligned_cols=145 Identities=14% Similarity=0.173 Sum_probs=101.4
Q ss_pred EEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecCCCCC
Q 014177 43 LVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAAGPFQ 120 (429)
Q Consensus 43 lV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~agp~~ 120 (429)
|||||+||||+++++.|.+. +++++++.+. ..+|+.|.++++++++ ++|+|||||+...
T Consensus 1 lItGa~GfiG~~l~~~L~~~--g~~v~~~~~~-----------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~ 61 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEAL--GFTNLVLRTH-----------------KELDLTRQADVEAFFAKEKPTYVILAAAKVG 61 (306)
T ss_pred CcccCCCcccHHHHHHHHhC--CCcEEEeecc-----------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeec
Confidence 69999999999999999987 6776655321 2479999999998877 5799999997532
Q ss_pred C----------------CchHHHHHHHHHcCCc-EEEeCCChhHHHH-HHhhHHHHHHcCCcEEecCCCccchhHHHHHH
Q 014177 121 Q----------------APKCTVLEAAIETKTA-YIDVCDDTIYSQR-AKSFKDRAIAANIPAITTGGIYPGVSNVMAAE 182 (429)
Q Consensus 121 ~----------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~-~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~ 182 (429)
. .++.+++++|.+.+++ +|.+++...|... ..+.+|.....+ +.-+ ....|+.||.+++.
T Consensus 62 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~-~~~p-~~~~Y~~sK~~~e~ 139 (306)
T PLN02725 62 GIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTG-PPEP-TNEWYAIAKIAGIK 139 (306)
T ss_pred ccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccC-CCCC-CcchHHHHHHHHHH
Confidence 0 1467899999999975 6666665444321 112333221111 1101 12249999999999
Q ss_pred HHHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 183 LVRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 183 ~~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
+++.+.+++..++..+|+ ...+|++.
T Consensus 140 ~~~~~~~~~~~~~~~~R~-~~vyG~~~ 165 (306)
T PLN02725 140 MCQAYRIQYGWDAISGMP-TNLYGPHD 165 (306)
T ss_pred HHHHHHHHhCCCEEEEEe-cceeCCCC
Confidence 998887777888889998 56788864
No 62
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.19 E-value=2.7e-10 Score=108.55 Aligned_cols=152 Identities=17% Similarity=0.150 Sum_probs=99.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
+++++++|+||+|+||+++++.|+++ |++|++.+|+.++++.+.+.++.++.++++|++|.++++++++ ++
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 81 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAE--GARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKL 81 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 56789999999999999999999997 8999999999988888877766668889999999988877664 58
Q ss_pred cEEEecCCCCCCCc-----hHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecC---------CCccch
Q 014177 110 DLVVHAAGPFQQAP-----KCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTG---------GIYPGV 175 (429)
Q Consensus 110 DvVi~~agp~~~~~-----~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~---------g~~pG~ 175 (429)
|++||++|...... ...-.+...+ +.++++-...+......+....+..|..+.+++ ...|+.
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~---~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~ 158 (263)
T PRK06200 82 DCFVGNAGIWDYNTSLVDIPAETLDTAFD---EIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGGPLYTA 158 (263)
T ss_pred CEEEECCCCcccCCCcccCChhHHHHHHH---HHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCCchhHH
Confidence 99999998643110 0011110011 122332222221111111111122333333332 124899
Q ss_pred hHHHHHHHHHHHHhhcCC
Q 014177 176 SNVMAAELVRVARNESKG 193 (429)
Q Consensus 176 s~~~a~~~~~~~~~~~~~ 193 (429)
+|.....+++.+..++..
T Consensus 159 sK~a~~~~~~~la~el~~ 176 (263)
T PRK06200 159 SKHAVVGLVRQLAYELAP 176 (263)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999888877654
No 63
>PLN02996 fatty acyl-CoA reductase
Probab=99.18 E-value=6.9e-11 Score=122.61 Aligned_cols=173 Identities=14% Similarity=0.114 Sum_probs=111.7
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchh---HHHHH-------------HHh--------CCCc
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREK---GAAMV-------------STL--------GKNS 89 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~---~~~l~-------------~~l--------~~~v 89 (429)
+.+++++|+|||||||+|+++++.|++.+++. +|.+..|.... .+++. +.. ..++
T Consensus 7 ~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv 86 (491)
T PLN02996 7 QFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKV 86 (491)
T ss_pred HHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCE
Confidence 45788999999999999999999998765544 68888886531 11111 101 1468
Q ss_pred EEEEeeCC-------ChHHHHHHhcCccEEEecCCCCCC------------CchHHHHHHHHHc-CCc-EEEeCCChhHH
Q 014177 90 EFAEVNIY-------NEGSLLMALRDVDLVVHAAGPFQQ------------APKCTVLEAAIET-KTA-YIDVCDDTIYS 148 (429)
Q Consensus 90 ~~~~~Dl~-------d~~~l~~~~~~~DvVi~~agp~~~------------~~~~~v~~aa~~~-gv~-~vdis~~~~~~ 148 (429)
.++.+|++ |.+.++++++++|+|||+|+.... .++.+++++|.+. +++ .+.+|+...|.
T Consensus 87 ~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG 166 (491)
T PLN02996 87 TPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCG 166 (491)
T ss_pred EEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEec
Confidence 89999998 445577788899999999975432 2567889999885 554 45555443321
Q ss_pred HHH---------------------------------Hh-----hHHHHH-----HcCCc--EEecCCCccchhHHHHHHH
Q 014177 149 QRA---------------------------------KS-----FKDRAI-----AANIP--AITTGGIYPGVSNVMAAEL 183 (429)
Q Consensus 149 ~~~---------------------------------~~-----~~~~a~-----~~g~~--~i~~~g~~pG~s~~~a~~~ 183 (429)
... .. .++... +-|.. ...+-...|+.||.+++++
T Consensus 167 ~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~l 246 (491)
T PLN02996 167 EKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEML 246 (491)
T ss_pred CCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHH
Confidence 100 00 000000 00100 0122234599999999999
Q ss_pred HHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 184 VRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 184 ~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
+..+.. +.++..+|. ++++|+...
T Consensus 247 v~~~~~--~lpv~i~RP-~~V~G~~~~ 270 (491)
T PLN02996 247 LGNFKE--NLPLVIIRP-TMITSTYKE 270 (491)
T ss_pred HHHhcC--CCCEEEECC-CEeccCCcC
Confidence 987753 678889998 677887653
No 64
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.17 E-value=2e-10 Score=103.22 Aligned_cols=95 Identities=26% Similarity=0.388 Sum_probs=81.2
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCCCC
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQ 121 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~ 121 (429)
|+|+||+|++|+.+++.|+++ +++|++..|++++.+. ..+++++++|+.|.+++.++++++|+||+++++...
T Consensus 1 I~V~GatG~vG~~l~~~L~~~--~~~V~~~~R~~~~~~~-----~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~ 73 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRR--GHEVTALVRSPSKAED-----SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK 73 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHT--TSEEEEEESSGGGHHH-----CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT
T ss_pred eEEECCCChHHHHHHHHHHHC--CCEEEEEecCchhccc-----ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcc
Confidence 799999999999999999998 7999999999998776 367999999999999999999999999999986443
Q ss_pred --CchHHHHHHHHHcCCcEE-EeCC
Q 014177 122 --APKCTVLEAAIETKTAYI-DVCD 143 (429)
Q Consensus 122 --~~~~~v~~aa~~~gv~~v-dis~ 143 (429)
.....++++|.+.|++.+ .+++
T Consensus 74 ~~~~~~~~~~a~~~~~~~~~v~~s~ 98 (183)
T PF13460_consen 74 DVDAAKNIIEAAKKAGVKRVVYLSS 98 (183)
T ss_dssp HHHHHHHHHHHHHHTTSSEEEEEEE
T ss_pred cccccccccccccccccccceeeec
Confidence 123678888999998664 4443
No 65
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.17 E-value=3.2e-10 Score=111.15 Aligned_cols=83 Identities=20% Similarity=0.311 Sum_probs=70.0
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc--
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR-- 107 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~-- 107 (429)
.++++++++||||+++||.++++.|+++ |++|++++|+.+++++..+++. .++.++++|+.|.++++++++
T Consensus 10 ~~l~gk~~lITGas~GIG~~~a~~La~~--G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~ 87 (313)
T PRK05854 10 PDLSGKRAVVTGASDGLGLGLARRLAAA--GAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQL 87 (313)
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHH
Confidence 4577899999999999999999999997 8999999999888776655442 257889999999998887765
Q ss_pred -----CccEEEecCCCC
Q 014177 108 -----DVDLVVHAAGPF 119 (429)
Q Consensus 108 -----~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 88 ~~~~~~iD~li~nAG~~ 104 (313)
T PRK05854 88 RAEGRPIHLLINNAGVM 104 (313)
T ss_pred HHhCCCccEEEECCccc
Confidence 489999999864
No 66
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.17 E-value=5.4e-10 Score=105.23 Aligned_cols=81 Identities=19% Similarity=0.201 Sum_probs=68.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
+++++++|+||+|++|+++++.|+++ |++|++.+|+.++++++.++++.++.++++|++|.+++.++++ ++
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAE--GARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRL 81 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 56789999999999999999999997 7899999999888877777766667889999999887655443 68
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|+|||++|..
T Consensus 82 d~vi~~ag~~ 91 (249)
T PRK06500 82 DAVFINAGVA 91 (249)
T ss_pred CEEEECCCCC
Confidence 9999999854
No 67
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.16 E-value=2.5e-10 Score=108.36 Aligned_cols=81 Identities=12% Similarity=0.220 Sum_probs=71.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
+++++++|+||+|++|+++++.|+++ |++|++++|+.++.+++.+.+..++.++++|++|.+++.++++ ++
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAE--GARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGI 81 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 55689999999999999999999997 8999999999998888777666568889999999998887765 58
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|++||++|..
T Consensus 82 d~li~~ag~~ 91 (257)
T PRK07067 82 DILFNNAALF 91 (257)
T ss_pred CEEEECCCcC
Confidence 9999999854
No 68
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.16 E-value=2e-10 Score=123.74 Aligned_cols=162 Identities=19% Similarity=0.135 Sum_probs=106.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh--HHHHHHHhC-CCcEEEEeeCCCh------HHHHHHhcCcc
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK--GAAMVSTLG-KNSEFAEVNIYNE------GSLLMALRDVD 110 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~--~~~l~~~l~-~~v~~~~~Dl~d~------~~l~~~~~~~D 110 (429)
|+||||||+||||+++++.|++...+++|++.+|+... ++.+..... .+++++.+|++|. +.++++ +++|
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D 79 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID 79 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence 47999999999999999999952237899999996532 223322222 4688999999983 456655 8999
Q ss_pred EEEecCCCCCC------------CchHHHHHHHHHcCCcE-EEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhH
Q 014177 111 LVVHAAGPFQQ------------APKCTVLEAAIETKTAY-IDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSN 177 (429)
Q Consensus 111 vVi~~agp~~~------------~~~~~v~~aa~~~gv~~-vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~ 177 (429)
+|||||+.... .++.+++++|.+.+++. +.+|+...+......+.+...... ......|+.||
T Consensus 80 ~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~----~~~~~~Y~~sK 155 (657)
T PRK07201 80 HVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVFREDDFDEG----QGLPTPYHRTK 155 (657)
T ss_pred EEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCccccccchhh----cCCCCchHHHH
Confidence 99999985431 24678899999987655 555544433211111111100000 01123499999
Q ss_pred HHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 178 VMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 178 ~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
+.++.++.. ..+.++..+|. .+.+|+...
T Consensus 156 ~~~E~~~~~---~~g~~~~ilRp-~~v~G~~~~ 184 (657)
T PRK07201 156 FEAEKLVRE---ECGLPWRVYRP-AVVVGDSRT 184 (657)
T ss_pred HHHHHHHHH---cCCCcEEEEcC-CeeeecCCC
Confidence 999998864 34667888898 456786543
No 69
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.15 E-value=7.6e-10 Score=106.44 Aligned_cols=80 Identities=15% Similarity=0.106 Sum_probs=69.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Ccc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DVD 110 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~D 110 (429)
.+++++|+||+|+||+++++.|+++ |++|++.+|+.++++.+.+....++..+++|++|.+++.++++ ++|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d 80 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAA--GHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPID 80 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhC--cCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 4578999999999999999999997 8999999999988877766554567889999999998887766 589
Q ss_pred EEEecCCCC
Q 014177 111 LVVHAAGPF 119 (429)
Q Consensus 111 vVi~~agp~ 119 (429)
+||||+|..
T Consensus 81 ~vv~~ag~~ 89 (277)
T PRK06180 81 VLVNNAGYG 89 (277)
T ss_pred EEEECCCcc
Confidence 999999864
No 70
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.15 E-value=2.9e-10 Score=111.28 Aligned_cols=158 Identities=21% Similarity=0.260 Sum_probs=105.7
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhc--CccEEEecC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALR--DVDLVVHAA 116 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~a 116 (429)
+|+|+||+|++|+.+++.|+++ +++|++.+|............. .+++.+.+|+.|.+++.++++ ++|+||||+
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~--g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~a 78 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLES--GHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFA 78 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhC--CCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECc
Confidence 5899999999999999999997 7888888764332111111111 146788999999999998886 699999999
Q ss_pred CCCCC---------------CchHHHHHHHHHcCCcE-EEeCCChhHHHHHH-hhHHHHHHcCCcEEecCCCccchhHHH
Q 014177 117 GPFQQ---------------APKCTVLEAAIETKTAY-IDVCDDTIYSQRAK-SFKDRAIAANIPAITTGGIYPGVSNVM 179 (429)
Q Consensus 117 gp~~~---------------~~~~~v~~aa~~~gv~~-vdis~~~~~~~~~~-~~~~~a~~~g~~~i~~~g~~pG~s~~~ 179 (429)
|.... .+..+++++|.+.++.. +.+++...|..... .+.+. .+ ......|+.+|..
T Consensus 79 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~-----~~--~~~~~~y~~sK~~ 151 (328)
T TIGR01179 79 GLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISED-----SP--LGPINPYGRSKLM 151 (328)
T ss_pred cccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCcccc-----CC--CCCCCchHHHHHH
Confidence 85421 13467788898888654 44444332211100 11111 01 1122459999999
Q ss_pred HHHHHHHHHhh-cCCCCeEEEEEeeecCCC
Q 014177 180 AAELVRVARNE-SKGEPERLRFSYYTAGTG 208 (429)
Q Consensus 180 a~~~~~~~~~~-~~~~v~~i~~~~~~~G~~ 208 (429)
++.+++.+.++ ...++..+|. +..+|+.
T Consensus 152 ~e~~~~~~~~~~~~~~~~ilR~-~~v~g~~ 180 (328)
T TIGR01179 152 SERILRDLSKADPGLSYVILRY-FNVAGAD 180 (328)
T ss_pred HHHHHHHHHHhccCCCEEEEec-CcccCCC
Confidence 99999887655 5667788887 5667865
No 71
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.15 E-value=2.2e-10 Score=109.95 Aligned_cols=81 Identities=16% Similarity=0.193 Sum_probs=69.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
|++++|+|+||+|++|+++++.|+++ |++|++.+|+.++++.+.+.++..+.++++|++|.+++.++++ ++
T Consensus 1 ~~~k~vlItGasg~iG~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 78 (275)
T PRK08263 1 MMEKVWFITGASRGFGRAWTEAALER--GDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRL 78 (275)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 34678999999999999999999987 7899999999988887776665567888999999988877655 57
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|+||||+|..
T Consensus 79 d~vi~~ag~~ 88 (275)
T PRK08263 79 DIVVNNAGYG 88 (275)
T ss_pred CEEEECCCCc
Confidence 9999999864
No 72
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.15 E-value=1.8e-10 Score=112.38 Aligned_cols=155 Identities=17% Similarity=0.211 Sum_probs=103.2
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHh----cCccEEEecC
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMAL----RDVDLVVHAA 116 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~----~~~DvVi~~a 116 (429)
|||+||+||+|+++++.|.++ ++ +|++.+|.... ..+.+ +. ...+..|+.+.+.++.+. .++|+|||||
T Consensus 1 ilItGatG~iG~~l~~~L~~~--g~~~v~~~~~~~~~-~~~~~-~~--~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A 74 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNER--GITDILVVDNLRDG-HKFLN-LA--DLVIADYIDKEDFLDRLEKGAFGKIEAIFHQG 74 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHc--CCceEEEEecCCCc-hhhhh-hh--heeeeccCcchhHHHHHHhhccCCCCEEEECc
Confidence 689999999999999999997 65 78888765432 12211 11 134667888877776665 3799999999
Q ss_pred CCCCC-------------CchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHH
Q 014177 117 GPFQQ-------------APKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAEL 183 (429)
Q Consensus 117 gp~~~-------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~ 183 (429)
+.... .++.+++++|.+.+++.|.+|+...|......+.+. . .+ ......||.+|..++.+
T Consensus 75 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~~~~~~e~---~-~~--~~p~~~Y~~sK~~~e~~ 148 (314)
T TIGR02197 75 ACSDTTETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDGEAGFREG---R-EL--ERPLNVYGYSKFLFDQY 148 (314)
T ss_pred cccCccccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCCCCCcccc---c-Cc--CCCCCHHHHHHHHHHHH
Confidence 85321 235678999999999888888765543211122221 0 00 11224599999999999
Q ss_pred HHHHHhh-c-CCCCeEEEEEeeecCCCC
Q 014177 184 VRVARNE-S-KGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 184 ~~~~~~~-~-~~~v~~i~~~~~~~G~~~ 209 (429)
++.+..+ . ...+..+|+ ...+|++.
T Consensus 149 ~~~~~~~~~~~~~~~~lR~-~~vyG~~~ 175 (314)
T TIGR02197 149 VRRRVLPEALSAQVVGLRY-FNVYGPRE 175 (314)
T ss_pred HHHHhHhhccCCceEEEEE-eeccCCCC
Confidence 8865322 2 336778888 56788874
No 73
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=99.15 E-value=1.3e-10 Score=110.11 Aligned_cols=162 Identities=16% Similarity=0.117 Sum_probs=92.3
Q ss_pred EEcCChHHHHHHHHHHhHcCCCceEEEEecCchh---HHHHHHH-------------hCCCcEEEEeeCCCh------HH
Q 014177 44 VLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK---GAAMVST-------------LGKNSEFAEVNIYNE------GS 101 (429)
Q Consensus 44 V~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~---~~~l~~~-------------l~~~v~~~~~Dl~d~------~~ 101 (429)
|||||||+|+++++.|+++.+..+|++..|+.+. .+++.+. ...++.++.+|++++ +.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 7999999999999999998543489999997633 3333221 146899999999974 35
Q ss_pred HHHHhcCccEEEecCCCCCC------------CchHHHHHHHHHcC-CcEEEeCCChhHHHHHHhhHHH-HHHcCCcEEe
Q 014177 102 LLMALRDVDLVVHAAGPFQQ------------APKCTVLEAAIETK-TAYIDVCDDTIYSQRAKSFKDR-AIAANIPAIT 167 (429)
Q Consensus 102 l~~~~~~~DvVi~~agp~~~------------~~~~~v~~aa~~~g-v~~vdis~~~~~~~~~~~~~~~-a~~~g~~~i~ 167 (429)
..++.+++|+|||||+.... .|+.++++.|.+.+ .+++.+|+............+. ..........
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~~ 160 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLDP 160 (249)
T ss_dssp HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE-
T ss_pred hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccccchh
Confidence 66677799999999975432 25788899998543 4666676521111111010000 0000111222
Q ss_pred c--CCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecC
Q 014177 168 T--GGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAG 206 (429)
Q Consensus 168 ~--~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G 206 (429)
. ....|..||+++|+++..+.++.+.++..+|... ..|
T Consensus 161 ~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~-i~g 200 (249)
T PF07993_consen 161 PQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGI-IVG 200 (249)
T ss_dssp -TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-E-EE-
T ss_pred hccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCc-ccc
Confidence 2 2234999999999999998877788999999965 455
No 74
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.14 E-value=9.8e-11 Score=112.96 Aligned_cols=137 Identities=20% Similarity=0.298 Sum_probs=100.1
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCc--cEEEecCCC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDV--DLVVHAAGP 118 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~--DvVi~~agp 118 (429)
+|+|+||+|++|+++++.|+++ |++|++.+|+ .+|+.|.+.+.+++++. |+||||+++
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~--g~~v~~~~r~------------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~ 60 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPE--GRVVVALTSS------------------QLDLTDPEALERLLRAIRPDAVVNTAAY 60 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhc--CCEEEEeCCc------------------ccCCCCHHHHHHHHHhCCCCEEEECCcc
Confidence 5899999999999999999997 8899998874 46899999999988854 999999986
Q ss_pred CCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHH-HHhhHHHHHHcCCcEEecCCCccchhHHHHHH
Q 014177 119 FQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQR-AKSFKDRAIAANIPAITTGGIYPGVSNVMAAE 182 (429)
Q Consensus 119 ~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~-~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~ 182 (429)
... .++.+++++|.+.+.++|.+|+...|... ...++|.. + +.....|+.+|..++.
T Consensus 61 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~E~~-----~--~~~~~~Y~~~K~~~E~ 133 (287)
T TIGR01214 61 TDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDGEGKRPYREDD-----A--TNPLNVYGQSKLAGEQ 133 (287)
T ss_pred ccccccccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeeeeecCCCCCCCCCCC-----C--CCCcchhhHHHHHHHH
Confidence 421 13567888998888888888765544221 11122211 1 1112459999999999
Q ss_pred HHHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 183 LVRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 183 ~~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
+++.+ +.++..+|. ...+|++.
T Consensus 134 ~~~~~----~~~~~ilR~-~~v~G~~~ 155 (287)
T TIGR01214 134 AIRAA----GPNALIVRT-SWLYGGGG 155 (287)
T ss_pred HHHHh----CCCeEEEEe-eecccCCC
Confidence 88754 457888998 45678764
No 75
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.14 E-value=5.1e-10 Score=106.75 Aligned_cols=81 Identities=14% Similarity=0.273 Sum_probs=68.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+.+++++|+||+|+||+++++.|+++ |++|++.+|+.++++++.+.+ +.++.++.+|++|.+++.++++
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEA--GADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF 85 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 66789999999999999999999997 899999999988877766554 2457889999999998877655
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 86 ~~id~vi~~Ag~~ 98 (263)
T PRK07814 86 GRLDIVVNNVGGT 98 (263)
T ss_pred CCCCEEEECCCCC
Confidence 689999999853
No 76
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.13 E-value=2.4e-10 Score=108.27 Aligned_cols=81 Identities=19% Similarity=0.219 Sum_probs=69.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+.+|+++|+||+|+||+++++.|+++ |++|++.+|+.++++.+.+++. .++.++.+|++|.++++++++
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARA--GADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERF 80 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999997 8999999999888777666542 457889999999988877664
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 81 g~~d~vi~~ag~~ 93 (258)
T PRK07890 81 GRVDALVNNAFRV 93 (258)
T ss_pred CCccEEEECCccC
Confidence 589999999864
No 77
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.13 E-value=9.8e-10 Score=103.61 Aligned_cols=81 Identities=20% Similarity=0.275 Sum_probs=67.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++++|+||+|++|+++++.|+++ |++|++.+|+.++.+.+.+.+. .++.++.+|++|.+++.++++
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALARE--GASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAF 81 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 56689999999999999999999997 7999999999877666655442 346788999999988877665
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 82 ~~id~vi~~ag~~ 94 (250)
T PRK07774 82 GGIDYLVNNAAIY 94 (250)
T ss_pred CCCCEEEECCCCc
Confidence 589999999864
No 78
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.13 E-value=5.8e-10 Score=115.43 Aligned_cols=105 Identities=23% Similarity=0.378 Sum_probs=84.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC------------CCcEEEEeeCCChHHHHH
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG------------KNSEFAEVNIYNEGSLLM 104 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~------------~~v~~~~~Dl~d~~~l~~ 104 (429)
+++++|+|+||+|+||+++++.|+++ |++|++++|+.++++.+.+.+. .++.++++|+.|.+++.+
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~--G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~ 155 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP 155 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH
Confidence 35678999999999999999999997 8999999999988876654321 247889999999999999
Q ss_pred HhcCccEEEecCCCCCC-------------CchHHHHHHHHHcCCc-EEEeCC
Q 014177 105 ALRDVDLVVHAAGPFQQ-------------APKCTVLEAAIETKTA-YIDVCD 143 (429)
Q Consensus 105 ~~~~~DvVi~~agp~~~-------------~~~~~v~~aa~~~gv~-~vdis~ 143 (429)
.++++|+||||+|.... .+..+++++|.+.|+. +|.+++
T Consensus 156 aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSS 208 (576)
T PLN03209 156 ALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTS 208 (576)
T ss_pred HhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEcc
Confidence 99999999999986421 2456788899888875 455554
No 79
>PLN00016 RNA-binding protein; Provisional
Probab=99.13 E-value=8.7e-10 Score=110.98 Aligned_cols=156 Identities=17% Similarity=0.182 Sum_probs=102.2
Q ss_pred CCCCeEEEE----cCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHH-------HHh-CCCcEEEEeeCCChHHHHH
Q 014177 37 NRNARVLVL----GGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMV-------STL-GKNSEFAEVNIYNEGSLLM 104 (429)
Q Consensus 37 ~~~~~VlV~----Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~-------~~l-~~~v~~~~~Dl~d~~~l~~ 104 (429)
.++++|||+ ||+||||+++++.|++. |++|++.+|+......+. .++ ...++++++|+.|.+.+.
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~- 126 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKA--GHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKV- 126 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHC--CCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhh-
Confidence 456789999 99999999999999997 899999999876533221 111 124788999997733222
Q ss_pred HhcCccEEEecCCCCCCCchHHHHHHHHHcCCc-EEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHH
Q 014177 105 ALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTA-YIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAEL 183 (429)
Q Consensus 105 ~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~ 183 (429)
...++|+|||+++... .+..+++++|.+.|++ +|.+++...|..... .+........|..+|+.++.+
T Consensus 127 ~~~~~d~Vi~~~~~~~-~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~----------~p~~E~~~~~p~~sK~~~E~~ 195 (378)
T PLN00016 127 AGAGFDVVYDNNGKDL-DEVEPVADWAKSPGLKQFLFCSSAGVYKKSDE----------PPHVEGDAVKPKAGHLEVEAY 195 (378)
T ss_pred ccCCccEEEeCCCCCH-HHHHHHHHHHHHcCCCEEEEEccHhhcCCCCC----------CCCCCCCcCCCcchHHHHHHH
Confidence 1247999999987532 2457899999999995 555665443321100 010001112233378877776
Q ss_pred HHHHHhhcCCCCeEEEEEeeecCCCCCC
Q 014177 184 VRVARNESKGEPERLRFSYYTAGTGGAG 211 (429)
Q Consensus 184 ~~~~~~~~~~~v~~i~~~~~~~G~~~~g 211 (429)
++ +.+.+...+|. .+.+|++...
T Consensus 196 l~----~~~l~~~ilRp-~~vyG~~~~~ 218 (378)
T PLN00016 196 LQ----KLGVNWTSFRP-QYIYGPGNNK 218 (378)
T ss_pred HH----HcCCCeEEEec-eeEECCCCCC
Confidence 65 45678889998 4568886543
No 80
>PRK05865 hypothetical protein; Provisional
Probab=99.13 E-value=8.2e-10 Score=119.84 Aligned_cols=96 Identities=23% Similarity=0.285 Sum_probs=76.8
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+|+|+||+||+|+++++.|+++ |++|++.+|+.... ...++.++++|+.|.+++.++++++|+|||||+..
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~--G~~Vv~l~R~~~~~------~~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~ 72 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQ--GHEVVGIARHRPDS------WPSSADFIAADIRDATAVESAMTGADVVAHCAWVR 72 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCchhh------cccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcc
Confidence 47999999999999999999997 89999999875321 12357889999999999999999999999999764
Q ss_pred CC------CchHHHHHHHHHcCCcE-EEeCC
Q 014177 120 QQ------APKCTVLEAAIETKTAY-IDVCD 143 (429)
Q Consensus 120 ~~------~~~~~v~~aa~~~gv~~-vdis~ 143 (429)
.. .++.+++++|.+.++.. |.+|+
T Consensus 73 ~~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS 103 (854)
T PRK05865 73 GRNDHINIDGTANVLKAMAETGTGRIVFTSS 103 (854)
T ss_pred cchHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 31 24567888888888754 45544
No 81
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.13 E-value=3.6e-10 Score=107.75 Aligned_cols=81 Identities=23% Similarity=0.419 Sum_probs=71.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
+++++++|+||+|+||+++++.|+++ |++|++.+|+.++++++.++++.++.++++|++|.+++.++++ .+
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 81 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAA--GARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRV 81 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 56789999999999999999999997 8999999999988888877766668899999999998877765 57
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|++||++|..
T Consensus 82 d~lv~~ag~~ 91 (261)
T PRK08265 82 DILVNLACTY 91 (261)
T ss_pred CEEEECCCCC
Confidence 9999999854
No 82
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.12 E-value=3.2e-09 Score=103.15 Aligned_cols=83 Identities=16% Similarity=0.293 Sum_probs=70.6
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc----
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
..+.+++++|+||+|+||+++++.|+++ |++|++.+|+.++++++.+.+ +.++.++++|++|.+++.++++
T Consensus 36 ~~~~~k~vlItGasggIG~~la~~La~~--G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 113 (293)
T PRK05866 36 VDLTGKRILLTGASSGIGEAAAEQFARR--GATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEK 113 (293)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 3456689999999999999999999997 899999999998887776654 2356789999999998888776
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|+||||||..
T Consensus 114 ~~g~id~li~~AG~~ 128 (293)
T PRK05866 114 RIGGVDILINNAGRS 128 (293)
T ss_pred HcCCCCEEEECCCCC
Confidence 789999999864
No 83
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.12 E-value=4.8e-10 Score=106.46 Aligned_cols=81 Identities=17% Similarity=0.304 Sum_probs=68.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++++|+||+|++|+++++.|+++ |++|++.+|++++.+++.+.+. .++.++++|++|.++++++++
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARA--GAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERF 82 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999997 8899999999877766655442 357789999999998887765
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+||||+|..
T Consensus 83 ~~~d~vi~~ag~~ 95 (262)
T PRK13394 83 GSVDILVSNAGIQ 95 (262)
T ss_pred CCCCEEEECCccC
Confidence 489999999864
No 84
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.12 E-value=2.8e-09 Score=101.26 Aligned_cols=79 Identities=18% Similarity=0.233 Sum_probs=67.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC--CcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK--NSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~--~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
+++++|+||+|+||+++++.|+++ |++|++.+|+.++++++.+.+.. ++.++++|++|.+++.++++ .+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQ--GATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 478999999999999999999997 88999999999888777665542 57889999999998877765 37
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|++||++|..
T Consensus 80 d~lv~~ag~~ 89 (257)
T PRK07024 80 DVVIANAGIS 89 (257)
T ss_pred CEEEECCCcC
Confidence 9999999864
No 85
>PRK06182 short chain dehydrogenase; Validated
Probab=99.12 E-value=5.7e-10 Score=106.98 Aligned_cols=77 Identities=22% Similarity=0.289 Sum_probs=66.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Ccc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DVD 110 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~D 110 (429)
++++++|+||+|++|+++++.|+++ |++|++.+|+.++++.+.. .++.++++|++|.+++.++++ ++|
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~~l~~~~~---~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id 76 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQ--GYTVYGAARRVDKMEDLAS---LGVHPLSLDVTDEASIKAAVDTIIAEEGRID 76 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh---CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 4689999999999999999999987 8999999999888776543 357889999999998888775 789
Q ss_pred EEEecCCCC
Q 014177 111 LVVHAAGPF 119 (429)
Q Consensus 111 vVi~~agp~ 119 (429)
+|||++|..
T Consensus 77 ~li~~ag~~ 85 (273)
T PRK06182 77 VLVNNAGYG 85 (273)
T ss_pred EEEECCCcC
Confidence 999999864
No 86
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.12 E-value=4.1e-10 Score=106.23 Aligned_cols=82 Identities=17% Similarity=0.257 Sum_probs=69.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh--CCCcEEEEeeCCChHHHHHHhc------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL--GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l--~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
.+++++++|+||+|++|+++++.|+++ |++|++.+|+.++.+...+.+ +.++.++++|++|.+++.++++
T Consensus 2 ~~~~k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~ 79 (252)
T PRK06138 2 RLAGRVAIVTGAGSGIGRATAKLFARE--GARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARW 79 (252)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHC--CCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 366789999999999999999999997 799999999988776665554 3457889999999998887765
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+||||+|..
T Consensus 80 ~~id~vi~~ag~~ 92 (252)
T PRK06138 80 GRLDVLVNNAGFG 92 (252)
T ss_pred CCCCEEEECCCCC
Confidence 689999999864
No 87
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.11 E-value=1.8e-09 Score=101.77 Aligned_cols=82 Identities=20% Similarity=0.304 Sum_probs=69.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhc------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
++++++++|+||+|++|+++++.|+++ |++|++.+|+.++.+.+...+. .++.++++|+.|.+++.++++
T Consensus 2 ~~~~~~vlItGasg~iG~~l~~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 2 RLEGKVAIVTGASSGIGEGIARRFAAE--GARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERF 79 (251)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 366789999999999999999999997 8899999999988777666553 457789999999999987765
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 80 ~~~d~vi~~ag~~ 92 (251)
T PRK07231 80 GSVDILVNNAGTT 92 (251)
T ss_pred CCCCEEEECCCCC
Confidence 579999999863
No 88
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.11 E-value=5.9e-10 Score=105.56 Aligned_cols=79 Identities=18% Similarity=0.273 Sum_probs=67.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-CccEEEe
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR-DVDLVVH 114 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~-~~DvVi~ 114 (429)
+++++|+||+|++|+++++.|+++ |++|++.+|+.++++.+.+.. ..++.++++|++|.+++.+++. ++|+|||
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~ 79 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARK--GHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLN 79 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEE
Confidence 578999999999999999999997 899999999887766654432 2357889999999999988877 8999999
Q ss_pred cCCCC
Q 014177 115 AAGPF 119 (429)
Q Consensus 115 ~agp~ 119 (429)
|+|..
T Consensus 80 ~ag~~ 84 (257)
T PRK09291 80 NAGIG 84 (257)
T ss_pred CCCcC
Confidence 99854
No 89
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.11 E-value=3e-09 Score=100.50 Aligned_cols=78 Identities=23% Similarity=0.357 Sum_probs=68.0
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------CccEE
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DVDLV 112 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~DvV 112 (429)
|+++|+||+|++|+++++.|+++ |++|++.+|++++++.+...++.++.++.+|++|.+++.++++ ++|+|
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v 78 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQ--GHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVL 78 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 57999999999999999999987 8999999999988887776665568889999999988877664 69999
Q ss_pred EecCCCC
Q 014177 113 VHAAGPF 119 (429)
Q Consensus 113 i~~agp~ 119 (429)
||++|..
T Consensus 79 i~~ag~~ 85 (248)
T PRK10538 79 VNNAGLA 85 (248)
T ss_pred EECCCcc
Confidence 9999853
No 90
>PRK08589 short chain dehydrogenase; Validated
Probab=99.11 E-value=7.8e-10 Score=106.09 Aligned_cols=80 Identities=20% Similarity=0.257 Sum_probs=67.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++|+++|+||+|+||+++++.|+++ |++|++.+|+ ++++++.+++ +.++..+++|++|.+++.++++
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~--G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQE--GAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF 80 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 66789999999999999999999997 8999999999 6666655544 2357889999999988877665
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 81 g~id~li~~Ag~~ 93 (272)
T PRK08589 81 GRVDVLFNNAGVD 93 (272)
T ss_pred CCcCEEEECCCCC
Confidence 579999999864
No 91
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.11 E-value=6.7e-10 Score=105.18 Aligned_cols=82 Identities=17% Similarity=0.278 Sum_probs=70.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++++|+||+|+||+++++.|+++ |++|++.+|+.++++++.+++. .++..+++|++|.+++.++++
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEA--GAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL 84 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 56789999999999999999999997 8999999999988887766553 357788999999998877764
Q ss_pred -CccEEEecCCCCC
Q 014177 108 -DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 -~~DvVi~~agp~~ 120 (429)
++|++|||+|...
T Consensus 85 g~id~lv~~ag~~~ 98 (253)
T PRK05867 85 GGIDIAVCNAGIIT 98 (253)
T ss_pred CCCCEEEECCCCCC
Confidence 7899999998653
No 92
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.11 E-value=8.2e-10 Score=105.47 Aligned_cols=82 Identities=12% Similarity=0.184 Sum_probs=69.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh----CCCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL----GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l----~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
++++|+++|+||+|.||+++++.|+++ |++|++.+|+.++++.+.+++ +.++.++++|++|.++++++++
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~ 82 (263)
T PRK08339 5 DLSGKLAFTTASSKGIGFGVARVLARA--GADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKN 82 (263)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHh
Confidence 367789999999999999999999997 899999999988877766554 2357889999999998888775
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|++||++|..
T Consensus 83 ~g~iD~lv~nag~~ 96 (263)
T PRK08339 83 IGEPDIFFFSTGGP 96 (263)
T ss_pred hCCCcEEEECCCCC
Confidence 589999999854
No 93
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.10 E-value=6.3e-10 Score=107.02 Aligned_cols=81 Identities=16% Similarity=0.228 Sum_probs=68.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++++||||+|+||+++++.|+++ |++|++++|+.++++++.+++. .++.++++|++|.+++.++++
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~--G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 81 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARR--GARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLL 81 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 67789999999999999999999997 8999999999888777665543 346788999999998887765
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 82 g~id~li~nAg~~ 94 (275)
T PRK05876 82 GHVDVVFSNAGIV 94 (275)
T ss_pred CCCCEEEECCCcC
Confidence 479999999853
No 94
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.10 E-value=7.9e-10 Score=103.38 Aligned_cols=82 Identities=18% Similarity=0.256 Sum_probs=69.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhc-------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
+++++++|+||+|++|+++++.|+++ |++|++.+|++++++.+.+.+. .++.++++|+.|.+++.++++
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAE--GYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFG 81 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 45689999999999999999999986 8899999999988777766553 357889999999998877765
Q ss_pred CccEEEecCCCCC
Q 014177 108 DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ~~DvVi~~agp~~ 120 (429)
++|+|||++|+..
T Consensus 82 ~~d~vi~~ag~~~ 94 (237)
T PRK07326 82 GLDVLIANAGVGH 94 (237)
T ss_pred CCCEEEECCCCCC
Confidence 6899999998653
No 95
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.09 E-value=3.3e-09 Score=98.32 Aligned_cols=78 Identities=21% Similarity=0.359 Sum_probs=66.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---CccEEEe
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---DVDLVVH 114 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---~~DvVi~ 114 (429)
++|+++|+||+|++|+++++.|+++ ++|++.+|+.++.+.+.+.. ..++++++|++|.+++.++++ ++|+|||
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~~~---~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~ 77 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELAPT---HTLLLGGRPAERLDELAAEL-PGATPFPVDLTDPEAIAAAVEQLGRLDVLVH 77 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHhh---CCEEEEeCCHHHHHHHHHHh-ccceEEecCCCCHHHHHHHHHhcCCCCEEEE
Confidence 4679999999999999999999985 68999999988776665444 357889999999999988887 5999999
Q ss_pred cCCCC
Q 014177 115 AAGPF 119 (429)
Q Consensus 115 ~agp~ 119 (429)
++|..
T Consensus 78 ~ag~~ 82 (227)
T PRK08219 78 NAGVA 82 (227)
T ss_pred CCCcC
Confidence 99864
No 96
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.09 E-value=1e-09 Score=104.25 Aligned_cols=79 Identities=15% Similarity=0.221 Sum_probs=63.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++++|+||+|+||+++++.|+++ |++|++.+|+.. .+.+.+++ +.++.++++|++|.+++.++++
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~--G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAE--GARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF 82 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 67789999999999999999999997 899999999853 33343333 2356788999999887776665
Q ss_pred -CccEEEecCCC
Q 014177 108 -DVDLVVHAAGP 118 (429)
Q Consensus 108 -~~DvVi~~agp 118 (429)
++|++||+||.
T Consensus 83 ~~id~lv~nAg~ 94 (260)
T PRK12823 83 GRIDVLINNVGG 94 (260)
T ss_pred CCCeEEEECCcc
Confidence 68999999974
No 97
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.09 E-value=2e-09 Score=95.77 Aligned_cols=82 Identities=17% Similarity=0.266 Sum_probs=71.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++.+.+|||+||+..||..+++.+.+. |-+|++++|+.+++++.....+ .+....+|+.|.++++++++ .
T Consensus 2 k~tgnTiLITGG~sGIGl~lak~f~el--gN~VIi~gR~e~~L~e~~~~~p-~~~t~v~Dv~d~~~~~~lvewLkk~~P~ 78 (245)
T COG3967 2 KTTGNTILITGGASGIGLALAKRFLEL--GNTVIICGRNEERLAEAKAENP-EIHTEVCDVADRDSRRELVEWLKKEYPN 78 (245)
T ss_pred cccCcEEEEeCCcchhhHHHHHHHHHh--CCEEEEecCcHHHHHHHHhcCc-chheeeecccchhhHHHHHHHHHhhCCc
Confidence 356779999999999999999999997 7799999999999999887764 57889999999998877765 6
Q ss_pred ccEEEecCCCCC
Q 014177 109 VDLVVHAAGPFQ 120 (429)
Q Consensus 109 ~DvVi~~agp~~ 120 (429)
.+++|||||.-.
T Consensus 79 lNvliNNAGIqr 90 (245)
T COG3967 79 LNVLINNAGIQR 90 (245)
T ss_pred hheeeecccccc
Confidence 799999999643
No 98
>PRK06196 oxidoreductase; Provisional
Probab=99.09 E-value=2.5e-09 Score=104.84 Aligned_cols=81 Identities=17% Similarity=0.295 Sum_probs=69.6
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++++|+|+||+|+||+++++.|+++ |++|++++|+.++++.+.+++. .+.++++|++|.++++++++ +
T Consensus 23 ~l~~k~vlITGasggIG~~~a~~L~~~--G~~Vv~~~R~~~~~~~~~~~l~-~v~~~~~Dl~d~~~v~~~~~~~~~~~~~ 99 (315)
T PRK06196 23 DLSGKTAIVTGGYSGLGLETTRALAQA--GAHVIVPARRPDVAREALAGID-GVEVVMLDLADLESVRAFAERFLDSGRR 99 (315)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhh-hCeEEEccCCCHHHHHHHHHHHHhcCCC
Confidence 466789999999999999999999997 8899999999988877766553 47889999999998877764 6
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+|||+||..
T Consensus 100 iD~li~nAg~~ 110 (315)
T PRK06196 100 IDILINNAGVM 110 (315)
T ss_pred CCEEEECCCCC
Confidence 89999999853
No 99
>PRK09135 pteridine reductase; Provisional
Probab=99.08 E-value=9.7e-10 Score=103.35 Aligned_cols=81 Identities=17% Similarity=0.331 Sum_probs=64.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-hhHHHHHHHh----CCCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-EKGAAMVSTL----GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-~~~~~l~~~l----~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+++++++|+||+|++|+++++.|+++ +++|++++|+. ++.+.+...+ +..+.++.+|++|.+++.++++
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 81 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAA--GYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVA 81 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 34578999999999999999999997 89999999863 4444443332 1347789999999998887766
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 82 ~~~~~d~vi~~ag~~ 96 (249)
T PRK09135 82 AFGRLDALVNNASSF 96 (249)
T ss_pred HcCCCCEEEECCCCC
Confidence 479999999853
No 100
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.08 E-value=7.8e-10 Score=105.95 Aligned_cols=81 Identities=23% Similarity=0.345 Sum_probs=69.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++++++||||+|.||+++++.|+++ |++|++.+|+.++++++.+.+. ++.++.+|++|.+++.++++ +
T Consensus 2 ~~~~~~ilVtGasggiG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (273)
T PRK07825 2 DLRGKVVAITGGARGIGLATARALAAL--GARVAIGDLDEALAKETAAELG-LVVGGPLDVTDPASFAAFLDAVEADLGP 78 (273)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhc-cceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 366789999999999999999999997 8999999999998887776654 57889999999998766554 5
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|++||++|..
T Consensus 79 id~li~~ag~~ 89 (273)
T PRK07825 79 IDVLVNNAGVM 89 (273)
T ss_pred CCEEEECCCcC
Confidence 79999999864
No 101
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.08 E-value=1.1e-09 Score=104.02 Aligned_cols=81 Identities=15% Similarity=0.213 Sum_probs=69.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+++|+++|+||+|+||+++++.|+++ |++|++.+|+.++++++.+++. .++.++++|++|.+++.++++
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 82 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFARE--GAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEE 82 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 66789999999999999999999997 8999999999888877766543 357789999999988887765
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 83 ~~g~id~li~~ag~~ 97 (260)
T PRK07063 83 AFGPLDVLVNNAGIN 97 (260)
T ss_pred HhCCCcEEEECCCcC
Confidence 689999999864
No 102
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.08 E-value=7.2e-09 Score=97.99 Aligned_cols=82 Identities=16% Similarity=0.271 Sum_probs=66.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
++++++++|+||+|++|+++++.|+++ |++|++. .|+.+++++....+. .++.++++|++|.+++.++++
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~--G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~ 80 (254)
T PRK12746 3 NLDGKVALVTGASRGIGRAIAMRLAND--GALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKN 80 (254)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHH
Confidence 356789999999999999999999997 7888774 687776666554442 357789999999998877765
Q ss_pred ---------CccEEEecCCCC
Q 014177 108 ---------DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---------~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 81 ~~~~~~~~~~id~vi~~ag~~ 101 (254)
T PRK12746 81 ELQIRVGTSEIDILVNNAGIG 101 (254)
T ss_pred HhccccCCCCccEEEECCCCC
Confidence 489999999864
No 103
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.07 E-value=5.2e-10 Score=110.04 Aligned_cols=80 Identities=23% Similarity=0.323 Sum_probs=69.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++++||||+|+||+++++.|+++ |++|++.+|+.++++.+.+++. .++.++++|++|.++++++++
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKR--GWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG 81 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence 56789999999999999999999997 7999999999988877766652 357889999999998887775
Q ss_pred -CccEEEecCCC
Q 014177 108 -DVDLVVHAAGP 118 (429)
Q Consensus 108 -~~DvVi~~agp 118 (429)
++|+|||+||.
T Consensus 82 ~~iD~li~nAg~ 93 (322)
T PRK07453 82 KPLDALVCNAAV 93 (322)
T ss_pred CCccEEEECCcc
Confidence 48999999984
No 104
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.07 E-value=2.6e-09 Score=100.68 Aligned_cols=148 Identities=18% Similarity=0.203 Sum_probs=98.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+++++++|+||+|++|+++++.|+++ |++|++.+|+.+ +.+.+...+ +.++.++++|++|.+++.++++
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~--G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGA--GAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREE 81 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHC--CCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 56789999999999999999999987 889999998753 444444333 2357789999999998877665
Q ss_pred --CccEEEecCCCCCC-------------CchHHHHHHHHHc---CCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecC
Q 014177 108 --DVDLVVHAAGPFQQ-------------APKCTVLEAAIET---KTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTG 169 (429)
Q Consensus 108 --~~DvVi~~agp~~~-------------~~~~~v~~aa~~~---gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~ 169 (429)
++|+|||+++.... .+...+++++.+. +.+.|.+++...... .. ....+ .
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~---~~-----~~~~~---~- 149 (248)
T PRK07806 82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFI---PT-----VKTMP---E- 149 (248)
T ss_pred CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcC---cc-----ccCCc---c-
Confidence 58999999975321 1345677777653 234565654321100 00 00001 0
Q ss_pred CCccchhHHHHHHHHHHHHhhcCCCCeEEEE
Q 014177 170 GIYPGVSNVMAAELVRVARNESKGEPERLRF 200 (429)
Q Consensus 170 g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~ 200 (429)
-..|+.||..++.+++.+..++... .+++
T Consensus 150 ~~~Y~~sK~a~e~~~~~l~~~~~~~--~i~v 178 (248)
T PRK07806 150 YEPVARSKRAGEDALRALRPELAEK--GIGF 178 (248)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhcc--CeEE
Confidence 1248899999999998887554332 3554
No 105
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.07 E-value=2.1e-09 Score=101.92 Aligned_cols=83 Identities=18% Similarity=0.308 Sum_probs=66.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTLGKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
++.+|+++|+||++.||+++++.|+++ |++|++.+|+.. +..+..+..+.++.++++|++|.++++++++
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 82 (251)
T PRK12481 5 DLNGKVAIITGCNTGLGQGMAIGLAKA--GADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMG 82 (251)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence 366799999999999999999999997 899999888643 2222333334567889999999998888765
Q ss_pred CccEEEecCCCCC
Q 014177 108 DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ~~DvVi~~agp~~ 120 (429)
++|++||+||...
T Consensus 83 ~iD~lv~~ag~~~ 95 (251)
T PRK12481 83 HIDILINNAGIIR 95 (251)
T ss_pred CCCEEEECCCcCC
Confidence 5899999998643
No 106
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.07 E-value=7.1e-10 Score=105.39 Aligned_cols=79 Identities=19% Similarity=0.281 Sum_probs=68.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhc--------Cc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALR--------DV 109 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~--------~~ 109 (429)
||+++|+||+|++|+++++.|+++ |++|++.+|+.++++++...+. .++.++++|++|.+++.++++ ++
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAE--GWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRL 78 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 478999999999999999999997 8999999999998888776654 468899999999988877655 46
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|+||||||..
T Consensus 79 d~vi~~ag~~ 88 (260)
T PRK08267 79 DVLFNNAGIL 88 (260)
T ss_pred CEEEECCCCC
Confidence 9999999864
No 107
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.07 E-value=6.4e-10 Score=108.11 Aligned_cols=82 Identities=20% Similarity=0.216 Sum_probs=69.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC--CcEEEEeeCCChHHHHHHhc------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK--NSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~--~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
++++++++|+||+|.||+++++.|.+. |++|++.+|+.++++.+.++++. .+..+++|++|.+++.++++
T Consensus 6 ~l~gk~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 83 (296)
T PRK05872 6 SLAGKVVVVTGAARGIGAELARRLHAR--GAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERF 83 (296)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 467899999999999999999999997 89999999999988888777652 35556799999988877654
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 84 g~id~vI~nAG~~ 96 (296)
T PRK05872 84 GGIDVVVANAGIA 96 (296)
T ss_pred CCCCEEEECCCcC
Confidence 689999999864
No 108
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.07 E-value=1.5e-09 Score=102.87 Aligned_cols=81 Identities=15% Similarity=0.283 Sum_probs=69.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++++|+||+|.||.++++.|++. |++|++.+|+.++++.+.+++. .++.++.+|++|.++++++++
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFARE--GAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERF 81 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 56789999999999999999999997 8899999999988877766542 357789999999998887765
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 82 ~~id~li~~ag~~ 94 (254)
T PRK07478 82 GGLDIAFNNAGTL 94 (254)
T ss_pred CCCCEEEECCCCC
Confidence 689999999864
No 109
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.06 E-value=1.1e-09 Score=106.96 Aligned_cols=81 Identities=25% Similarity=0.370 Sum_probs=67.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc---
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
++++++|+|+||+|+||+++++.|+++ |++|++++|+.++.+...+.+. .++.++++|++|.++++++++
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~--G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 90 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAK--GAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALR 90 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence 467799999999999999999999997 7899999999887665443331 357789999999998877664
Q ss_pred ----CccEEEecCCC
Q 014177 108 ----DVDLVVHAAGP 118 (429)
Q Consensus 108 ----~~DvVi~~agp 118 (429)
++|+||||||.
T Consensus 91 ~~~~~iD~li~nAg~ 105 (306)
T PRK06197 91 AAYPRIDLLINNAGV 105 (306)
T ss_pred hhCCCCCEEEECCcc
Confidence 58999999985
No 110
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.06 E-value=1.2e-09 Score=108.42 Aligned_cols=164 Identities=16% Similarity=0.103 Sum_probs=105.6
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhH---HHHHHH---h-------C-CCcEEEEeeCCCh------H
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKG---AAMVST---L-------G-KNSEFAEVNIYNE------G 100 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~---~~l~~~---l-------~-~~v~~~~~Dl~d~------~ 100 (429)
+|+||||+||+|+++++.|++++...+|++..|+.+.. +++.+. . . .+++++.+|++++ +
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 58999999999999999999973336899999976532 122211 1 0 3688899998753 4
Q ss_pred HHHHHhcCccEEEecCCCCCC------------CchHHHHHHHHHcCCc-EEEeCCChhHHHHHH-hhHHHHHHcCCcEE
Q 014177 101 SLLMALRDVDLVVHAAGPFQQ------------APKCTVLEAAIETKTA-YIDVCDDTIYSQRAK-SFKDRAIAANIPAI 166 (429)
Q Consensus 101 ~l~~~~~~~DvVi~~agp~~~------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~~-~~~~~a~~~g~~~i 166 (429)
...++.+++|+|||||+.... .++.+++++|.+.+++ .+.+++...+..... ...+. ..-....
T Consensus 81 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~--~~~~~~~ 158 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTED--DAIVTPP 158 (367)
T ss_pred HHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCcccc--ccccccc
Confidence 566677899999999985321 2456788999988877 556655443321100 00000 0000001
Q ss_pred ecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCC
Q 014177 167 TTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTG 208 (429)
Q Consensus 167 ~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~ 208 (429)
......|+.||+.++.+++.+.+. +.++..+|.. ..+|+.
T Consensus 159 ~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg-~v~G~~ 198 (367)
T TIGR01746 159 PGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPG-RILGNS 198 (367)
T ss_pred cccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCC-ceeecC
Confidence 111235999999999999877643 6777888874 456653
No 111
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.06 E-value=4.4e-09 Score=101.18 Aligned_cols=77 Identities=17% Similarity=0.196 Sum_probs=65.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--------Cc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--------DV 109 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--------~~ 109 (429)
++++++|+||+|++|+++++.|+++ |++|++.+|+.++++.+.+ ..++++.+|++|.++++++++ ++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~--G~~Vi~~~r~~~~~~~l~~---~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~i 77 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSD--GWRVFATCRKEEDVAALEA---EGLEAFQLDYAEPESIAALVAQVLELSGGRL 77 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHH---CCceEEEccCCCHHHHHHHHHHHHHHcCCCc
Confidence 3578999999999999999999987 8999999999988877654 357889999999988776654 47
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|+|||+||..
T Consensus 78 d~li~~Ag~~ 87 (277)
T PRK05993 78 DALFNNGAYG 87 (277)
T ss_pred cEEEECCCcC
Confidence 9999999753
No 112
>PLN02778 3,5-epimerase/4-reductase
Probab=99.06 E-value=3.7e-10 Score=109.92 Aligned_cols=129 Identities=21% Similarity=0.296 Sum_probs=86.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ 115 (429)
+.|+||||||+||+|+++++.|.++ |++|++..+ |+.|.+.+...++ ++|+||||
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~--g~~V~~~~~---------------------~~~~~~~v~~~l~~~~~D~ViH~ 64 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQ--GIDFHYGSG---------------------RLENRASLEADIDAVKPTHVFNA 64 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhC--CCEEEEecC---------------------ccCCHHHHHHHHHhcCCCEEEEC
Confidence 3478999999999999999999997 778765322 2334444444444 79999999
Q ss_pred CCCCCC------------------CchHHHHHHHHHcCCcEEEeCCChhHHHHH-H------hhHHHHHHcCCcEEecCC
Q 014177 116 AGPFQQ------------------APKCTVLEAAIETKTAYIDVCDDTIYSQRA-K------SFKDRAIAANIPAITTGG 170 (429)
Q Consensus 116 agp~~~------------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~-~------~~~~~a~~~g~~~i~~~g 170 (429)
|+.... .++.+++++|.+.|++.+.++++..|.... . .+.|. ..+. ...
T Consensus 65 Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee----~~p~--~~~ 138 (298)
T PLN02778 65 AGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLVLTNYATGCIFEYDDAHPLGSGIGFKEE----DTPN--FTG 138 (298)
T ss_pred CcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecceEeCCCCCCCcccCCCCCcC----CCCC--CCC
Confidence 986421 246789999999999988776554432110 0 11111 1111 122
Q ss_pred CccchhHHHHHHHHHHHHhhcCCCCeEEEE
Q 014177 171 IYPGVSNVMAAELVRVARNESKGEPERLRF 200 (429)
Q Consensus 171 ~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~ 200 (429)
..||.||++++.++..|. +...+|+
T Consensus 139 s~Yg~sK~~~E~~~~~y~-----~~~~lr~ 163 (298)
T PLN02778 139 SFYSKTKAMVEELLKNYE-----NVCTLRV 163 (298)
T ss_pred CchHHHHHHHHHHHHHhh-----ccEEeee
Confidence 569999999999998764 3445665
No 113
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.06 E-value=1.4e-09 Score=102.54 Aligned_cols=81 Identities=21% Similarity=0.292 Sum_probs=64.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
+++++++|+||+|+||+++++.|+++ |++|++.+|+.. ++.+.....+.++.++++|++|.+++.++++ +
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEA--GADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGH 80 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 67899999999999999999999997 889999998752 2222223334567899999999998876654 5
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|++||++|..
T Consensus 81 ~d~li~~ag~~ 91 (248)
T TIGR01832 81 IDILVNNAGII 91 (248)
T ss_pred CCEEEECCCCC
Confidence 89999999864
No 114
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.06 E-value=2.4e-09 Score=101.25 Aligned_cols=81 Identities=26% Similarity=0.358 Sum_probs=69.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
|++++++|+||+|++|+++++.|+++ |++|++.+|+.++++.+..++ +.++.++.+|++|.+++.++++
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 79 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKE--GAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETF 79 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999997 899999999988877766554 3467889999999998887766
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||+++..
T Consensus 80 ~~~d~vi~~a~~~ 92 (258)
T PRK12429 80 GGVDILVNNAGIQ 92 (258)
T ss_pred CCCCEEEECCCCC
Confidence 589999999854
No 115
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.05 E-value=1.4e-09 Score=107.69 Aligned_cols=82 Identities=20% Similarity=0.225 Sum_probs=69.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
.+.+++|+|+||+|+||+++++.|+++ |++|++.+|+.++++++.+++ +.++.++++|++|.++++++++
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~--G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~ 82 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARR--GAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEE 82 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 366789999999999999999999997 899999999998887766554 3467889999999998887754
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|++||++|..
T Consensus 83 ~g~iD~lInnAg~~ 96 (334)
T PRK07109 83 LGPIDTWVNNAMVT 96 (334)
T ss_pred CCCCCEEEECCCcC
Confidence 689999999854
No 116
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.05 E-value=1.6e-09 Score=106.97 Aligned_cols=81 Identities=19% Similarity=0.277 Sum_probs=69.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+.+++++|+||+|.||+++++.|+++ |++|++++|+.++++++.+++ +.++.++.+|++|.++++++++
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~--G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 82 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARR--GARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFG 82 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 56789999999999999999999997 899999999999888776654 2457788999999998888763
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|++|||||..
T Consensus 83 g~iD~lVnnAG~~ 95 (330)
T PRK06139 83 GRIDVWVNNVGVG 95 (330)
T ss_pred CCCCEEEECCCcC
Confidence 689999999853
No 117
>PRK09186 flagellin modification protein A; Provisional
Probab=99.05 E-value=1.7e-09 Score=102.35 Aligned_cols=80 Identities=23% Similarity=0.352 Sum_probs=67.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+++|+++|+||+|+||+++++.|+++ |++|++.+|+.++++++.+.+. ..+.++++|++|.+++.++++
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEA--GGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAE 79 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999997 8999999999888777665542 235677999999998888776
Q ss_pred ---CccEEEecCCC
Q 014177 108 ---DVDLVVHAAGP 118 (429)
Q Consensus 108 ---~~DvVi~~agp 118 (429)
++|+|||||++
T Consensus 80 ~~~~id~vi~~A~~ 93 (256)
T PRK09186 80 KYGKIDGAVNCAYP 93 (256)
T ss_pred HcCCccEEEECCcc
Confidence 37999999964
No 118
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.04 E-value=1.1e-09 Score=105.00 Aligned_cols=76 Identities=17% Similarity=0.245 Sum_probs=64.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------CccE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DVDL 111 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~Dv 111 (429)
||+++|+||+|++|+++++.|+++ |++|++.+|+.++++.+.. .++.++.+|++|.+++.++++ ++|+
T Consensus 1 mk~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 75 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAA--GYEVWATARKAEDVEALAA---AGFTAVQLDVNDGAALARLAEELEAEHGGLDV 75 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 478999999999999999999987 8999999999887766543 346788999999988877664 6899
Q ss_pred EEecCCCC
Q 014177 112 VVHAAGPF 119 (429)
Q Consensus 112 Vi~~agp~ 119 (429)
|||++|..
T Consensus 76 vi~~ag~~ 83 (274)
T PRK05693 76 LINNAGYG 83 (274)
T ss_pred EEECCCCC
Confidence 99999853
No 119
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.04 E-value=2.5e-09 Score=101.42 Aligned_cols=107 Identities=21% Similarity=0.272 Sum_probs=81.0
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCC-hHHHHHHh-cCccEE
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYN-EGSLLMAL-RDVDLV 112 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d-~~~l~~~~-~~~DvV 112 (429)
+..++|+|+|+||+|++|+.+++.|+++ +++|++..|+.++....... ..+++++++|++| .+.+.+.+ .++|+|
T Consensus 13 ~~~~~~~ilItGasG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~l~~~~~~~~d~v 89 (251)
T PLN00141 13 ENVKTKTVFVAGATGRTGKRIVEQLLAK--GFAVKAGVRDVDKAKTSLPQ-DPSLQIVRADVTEGSDKLVEAIGDDSDAV 89 (251)
T ss_pred ccccCCeEEEECCCcHHHHHHHHHHHhC--CCEEEEEecCHHHHHHhccc-CCceEEEEeeCCCCHHHHHHHhhcCCCEE
Confidence 3456789999999999999999999997 78999999998776544322 2358899999998 46777777 689999
Q ss_pred EecCCCCCC-----------CchHHHHHHHHHcCCcE-EEeCCC
Q 014177 113 VHAAGPFQQ-----------APKCTVLEAAIETKTAY-IDVCDD 144 (429)
Q Consensus 113 i~~agp~~~-----------~~~~~v~~aa~~~gv~~-vdis~~ 144 (429)
|+++|.... .+..++++++.+.++.. |.+++.
T Consensus 90 i~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 90 ICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred EECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 999875321 13467888888877654 444443
No 120
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.04 E-value=1.3e-08 Score=97.68 Aligned_cols=81 Identities=23% Similarity=0.327 Sum_probs=68.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
|++++++|+||+|+||+++++.|+++ |++|++.+|+.++.+...+.+. .++.++++|+.|.+++.++++
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 82 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAA--GAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA 82 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 66799999999999999999999997 8899999999887766655442 357788999999998877765
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 83 ~~~~~d~li~~ag~~ 97 (276)
T PRK05875 83 WHGRLHGVVHCAGGS 97 (276)
T ss_pred HcCCCCEEEECCCcc
Confidence 689999999853
No 121
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.04 E-value=6.7e-09 Score=98.63 Aligned_cols=80 Identities=23% Similarity=0.333 Sum_probs=67.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++++|+||+|+||+++++.|+++ |++|++++|+.++++.+.+.+. .++.++++|++|.++++++++
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~ 87 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEA--GARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF 87 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 56789999999999999999999997 7899999999887776655442 357789999999998866554
Q ss_pred -CccEEEecCCC
Q 014177 108 -DVDLVVHAAGP 118 (429)
Q Consensus 108 -~~DvVi~~agp 118 (429)
++|+|||++|.
T Consensus 88 ~~id~vi~~ag~ 99 (259)
T PRK08213 88 GHVDILVNNAGA 99 (259)
T ss_pred CCCCEEEECCCC
Confidence 58999999975
No 122
>PRK08643 acetoin reductase; Validated
Probab=99.04 E-value=1.8e-09 Score=102.34 Aligned_cols=79 Identities=22% Similarity=0.309 Sum_probs=67.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc-------C
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
+|+++|+||+|+||+++++.|+++ |++|++.+|+.++++.+..++. .++.++++|++|.+++.++++ +
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVED--GFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999997 8899999999887777665543 356789999999998877665 5
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+||||+|..
T Consensus 80 id~vi~~ag~~ 90 (256)
T PRK08643 80 LNVVVNNAGVA 90 (256)
T ss_pred CCEEEECCCCC
Confidence 89999999864
No 123
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.03 E-value=1.3e-09 Score=103.29 Aligned_cols=81 Identities=21% Similarity=0.318 Sum_probs=68.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+.+|+++|+||+|++|+++++.|+++ |++|++.+|+.++++.+.+.+. .++..+++|++|.++++++++
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQA--GAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEI 85 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 56799999999999999999999997 8999999999887776665543 247788999999998888775
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
.+|+|||++|..
T Consensus 86 ~~~d~li~~ag~~ 98 (255)
T PRK07523 86 GPIDILVNNAGMQ 98 (255)
T ss_pred CCCCEEEECCCCC
Confidence 489999999864
No 124
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.03 E-value=2.6e-09 Score=103.63 Aligned_cols=90 Identities=17% Similarity=0.170 Sum_probs=70.0
Q ss_pred ccCCccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHh---CCCcEEEEeeCCChHHHH
Q 014177 28 LDGAHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTL---GKNSEFAEVNIYNEGSLL 103 (429)
Q Consensus 28 ~~~~~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l---~~~v~~~~~Dl~d~~~l~ 103 (429)
+|....+..+++|+++|+||+|+||+++++.|+++ |++|++++|+.+ ..+.+.+.+ +.++.++.+|++|.+++.
T Consensus 35 ~~~~~~~~~~~~k~iLItGasggIG~~la~~l~~~--G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~ 112 (290)
T PRK06701 35 APNYKGSGKLKGKVALITGGDSGIGRAVAVLFAKE--GADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCK 112 (290)
T ss_pred ccccccccCCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHH
Confidence 34444456788899999999999999999999997 899999998753 333333333 235778999999999887
Q ss_pred HHhc-------CccEEEecCCCC
Q 014177 104 MALR-------DVDLVVHAAGPF 119 (429)
Q Consensus 104 ~~~~-------~~DvVi~~agp~ 119 (429)
++++ ++|+|||+||..
T Consensus 113 ~~~~~i~~~~~~iD~lI~~Ag~~ 135 (290)
T PRK06701 113 DAVEETVRELGRLDILVNNAAFQ 135 (290)
T ss_pred HHHHHHHHHcCCCCEEEECCccc
Confidence 7765 579999999854
No 125
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.03 E-value=2.6e-09 Score=101.59 Aligned_cols=78 Identities=23% Similarity=0.291 Sum_probs=66.6
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhc-------Ccc
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALR-------DVD 110 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~-------~~D 110 (429)
|+++|+||+|.||+++++.|+++ |++|++.+|+.+++++..+++. .++.++++|++|.++++++++ ++|
T Consensus 1 m~vlItGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id 78 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKK--GARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGID 78 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 58999999999999999999997 8999999999888777666553 357789999999998887764 689
Q ss_pred EEEecCCCC
Q 014177 111 LVVHAAGPF 119 (429)
Q Consensus 111 vVi~~agp~ 119 (429)
+|||++|..
T Consensus 79 ~li~naG~~ 87 (259)
T PRK08340 79 ALVWNAGNV 87 (259)
T ss_pred EEEECCCCC
Confidence 999999853
No 126
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.03 E-value=3.6e-09 Score=99.46 Aligned_cols=77 Identities=21% Similarity=0.246 Sum_probs=66.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcC----ccEEEe
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRD----VDLVVH 114 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~----~DvVi~ 114 (429)
|++++|+||+|++|+++++.|+++ |++|++.+|+.++++++.+.. .++.++++|++|.+++++++++ .|.+||
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~ 77 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQ--GWQVIACGRNQSVLDELHTQS-ANIFTLAFDVTDHPGTKAALSQLPFIPELWIF 77 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHhc-CCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence 478999999999999999999997 899999999988887776543 3678899999999999988874 588999
Q ss_pred cCCC
Q 014177 115 AAGP 118 (429)
Q Consensus 115 ~agp 118 (429)
++|.
T Consensus 78 ~ag~ 81 (240)
T PRK06101 78 NAGD 81 (240)
T ss_pred cCcc
Confidence 9874
No 127
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.02 E-value=1.2e-08 Score=96.05 Aligned_cols=82 Identities=22% Similarity=0.304 Sum_probs=68.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++|+|+||+|++|+++++.|+++ |++|++.+|+.+++......+. .++.++.+|+.|.+++.++++
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAAD--GAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDF 81 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 56789999999999999999999997 7899999999876665544432 347889999999998888775
Q ss_pred -CccEEEecCCCCC
Q 014177 108 -DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 -~~DvVi~~agp~~ 120 (429)
++|+|||++|...
T Consensus 82 ~~~d~vi~~ag~~~ 95 (251)
T PRK12826 82 GRLDILVANAGIFP 95 (251)
T ss_pred CCCCEEEECCCCCC
Confidence 6899999997654
No 128
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.02 E-value=3e-09 Score=100.78 Aligned_cols=81 Identities=20% Similarity=0.328 Sum_probs=69.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+.+++++|+||+|+||+++++.|+++ |++|++.+|+.++++.+...+ ..++.++.+|+++.+++.++++
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQA--GAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA 84 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 66799999999999999999999987 889999999998887776554 2457889999999988888765
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|++||++|..
T Consensus 85 ~~~d~li~~ag~~ 97 (258)
T PRK06949 85 GTIDILVNNSGVS 97 (258)
T ss_pred CCCCEEEECCCCC
Confidence 589999999854
No 129
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.02 E-value=2.9e-09 Score=102.31 Aligned_cols=81 Identities=23% Similarity=0.405 Sum_probs=68.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++++|+||+|++|+++++.|+++ |++|++.+|+.++++.+.+++. .++..+++|++|.+++.++++
T Consensus 8 ~~~k~vlVtGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARA--GAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDF 85 (278)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999987 8899999999887777665542 357789999999988877654
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 86 g~id~li~~ag~~ 98 (278)
T PRK08277 86 GPCDILINGAGGN 98 (278)
T ss_pred CCCCEEEECCCCC
Confidence 689999999854
No 130
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.02 E-value=3.4e-09 Score=100.70 Aligned_cols=80 Identities=23% Similarity=0.359 Sum_probs=65.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHH---hCCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVST---LGKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~---l~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++++|+||+|+||+++++.|++. |++|++.+|+ ++.+++.+. .+.++.++++|++|.+++.++++
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 89 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKA--GADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEF 89 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56799999999999999999999997 8999999988 444444333 23467899999999998887776
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|++||++|..
T Consensus 90 g~id~li~~ag~~ 102 (258)
T PRK06935 90 GKIDILVNNAGTI 102 (258)
T ss_pred CCCCEEEECCCCC
Confidence 679999999864
No 131
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.01 E-value=2.3e-09 Score=101.78 Aligned_cols=79 Identities=27% Similarity=0.296 Sum_probs=65.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc------
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++|+|+||+|+||+++++.|+++ |++|++++|+..+++.+.+.+. .++.++.+|++|.+++.++++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 79 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEE--GYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIF 79 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHc
Confidence 578999999999999999999997 8999999999887766654431 357889999999888776654
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 80 ~~id~vv~~ag~~ 92 (259)
T PRK12384 80 GRVDLLVYNAGIA 92 (259)
T ss_pred CCCCEEEECCCcC
Confidence 579999999754
No 132
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.01 E-value=2.9e-09 Score=102.27 Aligned_cols=81 Identities=15% Similarity=0.241 Sum_probs=64.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-------HHHHHHHh---CCCcEEEEeeCCChHHHHHHh
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-------GAAMVSTL---GKNSEFAEVNIYNEGSLLMAL 106 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-------~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~ 106 (429)
+++++++|+||+|++|+++++.|+++ |++|++.+|+.+. ++...+++ +.++.++++|++|.+++.+++
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~ 81 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARD--GANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAV 81 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence 56789999999999999999999997 7899999997643 23333222 245778999999999888776
Q ss_pred c-------CccEEEecCCCC
Q 014177 107 R-------DVDLVVHAAGPF 119 (429)
Q Consensus 107 ~-------~~DvVi~~agp~ 119 (429)
+ ++|+|||++|..
T Consensus 82 ~~~~~~~g~id~li~~ag~~ 101 (273)
T PRK08278 82 AKAVERFGGIDICVNNASAI 101 (273)
T ss_pred HHHHHHhCCCCEEEECCCCc
Confidence 5 689999999853
No 133
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.00 E-value=1.7e-09 Score=102.35 Aligned_cols=77 Identities=25% Similarity=0.361 Sum_probs=64.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++|+++|+||+|+||+++++.|+++ |++|++.+|+.++ ...+.++.++++|++|.+++.++++ +
T Consensus 3 ~~~~k~~lItGas~gIG~~la~~l~~~--g~~v~~~~r~~~~-----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 75 (252)
T PRK07856 3 DLTGRVVLVTGGTRGIGAGIARAFLAA--GATVVVCGRRAPE-----TVDGRPAEFHAADVRDPDQVAALVDAIVERHGR 75 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCChhh-----hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 366799999999999999999999997 8899999998764 1122457889999999988887765 4
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+||||+|..
T Consensus 76 id~vi~~ag~~ 86 (252)
T PRK07856 76 LDVLVNNAGGS 86 (252)
T ss_pred CCEEEECCCCC
Confidence 69999999854
No 134
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.00 E-value=2.5e-09 Score=102.00 Aligned_cols=83 Identities=19% Similarity=0.227 Sum_probs=69.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
++.+++++|+||+|++|+++++.|+++ |++|++.+|+.+++++..+.+ +.++.++++|++|.+++.++++
T Consensus 7 ~~~~k~~lItGa~~~iG~~ia~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (265)
T PRK07097 7 SLKGKIALITGASYGIGFAIAKAYAKA--GATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKE 84 (265)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 356789999999999999999999997 889999999988877665554 2357889999999998888775
Q ss_pred --CccEEEecCCCCC
Q 014177 108 --DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 --~~DvVi~~agp~~ 120 (429)
++|+||||+|...
T Consensus 85 ~~~id~li~~ag~~~ 99 (265)
T PRK07097 85 VGVIDILVNNAGIIK 99 (265)
T ss_pred CCCCCEEEECCCCCC
Confidence 4899999998643
No 135
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.00 E-value=3e-09 Score=101.36 Aligned_cols=82 Identities=21% Similarity=0.264 Sum_probs=68.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc---
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
+++++.++|+||+|+||+++++.|+++ |++|++.+|+.++++...+++. .++..+++|++|.+++.++++
T Consensus 5 ~l~~k~~lItGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (265)
T PRK07062 5 QLEGRVAVVTGGSSGIGLATVELLLEA--GASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVE 82 (265)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence 366789999999999999999999997 8999999999888776655432 246788999999998877654
Q ss_pred ----CccEEEecCCCC
Q 014177 108 ----DVDLVVHAAGPF 119 (429)
Q Consensus 108 ----~~DvVi~~agp~ 119 (429)
++|++|||||..
T Consensus 83 ~~~g~id~li~~Ag~~ 98 (265)
T PRK07062 83 ARFGGVDMLVNNAGQG 98 (265)
T ss_pred HhcCCCCEEEECCCCC
Confidence 579999999864
No 136
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.00 E-value=6e-09 Score=96.92 Aligned_cols=77 Identities=19% Similarity=0.275 Sum_probs=64.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-----CccEEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-----DVDLVV 113 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-----~~DvVi 113 (429)
|++++|+||+|++|+++++.|+++ |++|++++|+.++.+.+.+ + .++.+..+|++|.++++++++ ++|+||
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~-~-~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi 76 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLER--GWQVTATVRGPQQDTALQA-L-PGVHIEKLDMNDPASLDQLLQRLQGQRFDLLF 76 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhC--CCEEEEEeCCCcchHHHHh-c-cccceEEcCCCCHHHHHHHHHHhhcCCCCEEE
Confidence 478999999999999999999997 8999999999887665533 2 357788999999988877766 589999
Q ss_pred ecCCCC
Q 014177 114 HAAGPF 119 (429)
Q Consensus 114 ~~agp~ 119 (429)
|++|..
T Consensus 77 ~~ag~~ 82 (225)
T PRK08177 77 VNAGIS 82 (225)
T ss_pred EcCccc
Confidence 999864
No 137
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.00 E-value=3.2e-09 Score=100.01 Aligned_cols=81 Identities=26% Similarity=0.384 Sum_probs=68.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++++|+||+|++|+++++.|+++ +++|++.+|+.++.+++.+.+ +.++.++++|++|.++++++++
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 78 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEE--GAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQAL 78 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35789999999999999999999997 889999999988777665443 2468889999999998888765
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 79 ~~~d~vi~~ag~~ 91 (250)
T TIGR03206 79 GPVDVLVNNAGWD 91 (250)
T ss_pred CCCCEEEECCCCC
Confidence 589999999753
No 138
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.00 E-value=2e-09 Score=101.48 Aligned_cols=81 Identities=19% Similarity=0.261 Sum_probs=65.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEE-EecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVV-GSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v-~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
|.+++++|+||+|++|+++++.|+++ |++|++ .+|+.++.+++.+.+ +.++.++++|++|.+++.++++
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~--g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEE--GYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEE 79 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999997 788766 578877766655543 2457889999999998887765
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 80 ~~~id~vi~~ag~~ 93 (250)
T PRK08063 80 FGRLDVFVNNAASG 93 (250)
T ss_pred cCCCCEEEECCCCC
Confidence 589999999853
No 139
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.00 E-value=1.6e-09 Score=103.47 Aligned_cols=81 Identities=23% Similarity=0.288 Sum_probs=66.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++++|+||+|+||+++++.|+++ |++|++++|+.+.++...+.+. .++.++.+|++|.+++.++++
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARA--GANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEF 84 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999987 8999999999887766544432 356788999999988877765
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 85 ~~iD~vi~~ag~~ 97 (264)
T PRK07576 85 GPIDVLVSGAAGN 97 (264)
T ss_pred CCCCEEEECCCCC
Confidence 479999999743
No 140
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.00 E-value=1.2e-09 Score=104.52 Aligned_cols=75 Identities=25% Similarity=0.406 Sum_probs=63.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Ccc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DVD 110 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~D 110 (429)
.+++++|+||+|++|+++++.|+++ |++|++.+|+.++.+.. .+++++++|++|.++++++++ ++|
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~--g~~V~~~~r~~~~~~~~-----~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d 75 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARA--GYRVFGTSRNPARAAPI-----PGVELLELDVTDDASVQAAVDEVIARAGRID 75 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCChhhcccc-----CCCeeEEeecCCHHHHHHHHHHHHHhCCCCC
Confidence 3578999999999999999999997 89999999987654321 357899999999999888876 479
Q ss_pred EEEecCCCC
Q 014177 111 LVVHAAGPF 119 (429)
Q Consensus 111 vVi~~agp~ 119 (429)
+||||+|..
T Consensus 76 ~li~~ag~~ 84 (270)
T PRK06179 76 VLVNNAGVG 84 (270)
T ss_pred EEEECCCCC
Confidence 999999864
No 141
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.99 E-value=2.2e-09 Score=100.69 Aligned_cols=81 Identities=20% Similarity=0.324 Sum_probs=68.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++++|+||+|++|+++++.|+++ |++|++.+|+.++++++.+++ +.++.++++|++|.+++.++++
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKE--GVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNEL 82 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 55689999999999999999999987 789999999988766655443 2357789999999998888776
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 83 ~~id~vi~~ag~~ 95 (239)
T PRK07666 83 GSIDILINNAGIS 95 (239)
T ss_pred CCccEEEEcCccc
Confidence 689999999864
No 142
>PRK07775 short chain dehydrogenase; Provisional
Probab=98.99 E-value=3.3e-09 Score=101.84 Aligned_cols=81 Identities=21% Similarity=0.394 Sum_probs=67.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
..+++++|+||+|++|+++++.|+++ |++|++.+|+.++++.+...+ +.++.++++|++|.+++.++++
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAA--GFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEAL 85 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 55679999999999999999999997 889999999887766655443 2357788999999998887765
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 86 ~~id~vi~~Ag~~ 98 (274)
T PRK07775 86 GEIEVLVSGAGDT 98 (274)
T ss_pred CCCCEEEECCCcC
Confidence 579999999854
No 143
>PRK12829 short chain dehydrogenase; Provisional
Probab=98.99 E-value=1.9e-09 Score=102.48 Aligned_cols=81 Identities=21% Similarity=0.258 Sum_probs=68.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC-CcEEEEeeCCChHHHHHHhc-------C
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK-NSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~-~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
+++++++|+||+|++|+++++.|+++ |++|++++|+.+..+.+.+.... ++.++.+|++|.+++.++++ +
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEA--GARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGG 86 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 56789999999999999999999997 88999999998877776655432 45789999999998877664 6
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+|||++|..
T Consensus 87 ~d~vi~~ag~~ 97 (264)
T PRK12829 87 LDVLVNNAGIA 97 (264)
T ss_pred CCEEEECCCCC
Confidence 89999999865
No 144
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=98.99 E-value=4.3e-09 Score=98.78 Aligned_cols=81 Identities=22% Similarity=0.281 Sum_probs=69.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
+++++++|+||+|++|+++++.|+++ ++.|++.+|+.++++.+...++.++.++.+|++|.++++++++ ++
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQ--GAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGV 81 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 56789999999999999999999997 7888888999888887766665568889999999998877653 68
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|+||||+|..
T Consensus 82 d~vi~~ag~~ 91 (245)
T PRK12936 82 DILVNNAGIT 91 (245)
T ss_pred CEEEECCCCC
Confidence 9999999853
No 145
>PRK06398 aldose dehydrogenase; Validated
Probab=98.99 E-value=3e-09 Score=101.23 Aligned_cols=73 Identities=15% Similarity=0.307 Sum_probs=62.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++++++|+||+|+||+++++.|++. |++|++.+|+.... .++.++++|++|.++++++++ +
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~--G~~Vi~~~r~~~~~--------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 72 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEE--GSNVINFDIKEPSY--------NDVDYFKVDVSNKEQVIKGIDYVISKYGR 72 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCcccc--------CceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 467799999999999999999999997 89999999986542 247889999999988877765 6
Q ss_pred ccEEEecCCC
Q 014177 109 VDLVVHAAGP 118 (429)
Q Consensus 109 ~DvVi~~agp 118 (429)
+|+|||+||.
T Consensus 73 id~li~~Ag~ 82 (258)
T PRK06398 73 IDILVNNAGI 82 (258)
T ss_pred CCEEEECCCC
Confidence 8999999985
No 146
>PRK07074 short chain dehydrogenase; Provisional
Probab=98.99 E-value=3.1e-09 Score=100.74 Aligned_cols=79 Identities=24% Similarity=0.276 Sum_probs=67.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhc-------Ccc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALR-------DVD 110 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~-------~~D 110 (429)
+++++|+||+|+||+.+++.|+++ |++|++.+|+.++++.+.+.+. .++.++++|+.|.+++.++++ ++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAA--GDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999999999999999999987 7899999999988877766553 357889999999998877665 489
Q ss_pred EEEecCCCC
Q 014177 111 LVVHAAGPF 119 (429)
Q Consensus 111 vVi~~agp~ 119 (429)
+|||++|..
T Consensus 80 ~vi~~ag~~ 88 (257)
T PRK07074 80 VLVANAGAA 88 (257)
T ss_pred EEEECCCCC
Confidence 999999854
No 147
>PRK06123 short chain dehydrogenase; Provisional
Probab=98.99 E-value=1.2e-08 Score=96.15 Aligned_cols=79 Identities=20% Similarity=0.398 Sum_probs=62.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEe-cCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-------
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGS-RNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~-R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
++.++|+||+|++|+++++.|+++ |+.|++.+ |++++.+.+.+.+ +.++.++++|++|.+++.++++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~--G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAER--GYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELG 79 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence 468999999999999999999997 77887776 4445555444333 2356789999999998888775
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 80 ~id~li~~ag~~ 91 (248)
T PRK06123 80 RLDALVNNAGIL 91 (248)
T ss_pred CCCEEEECCCCC
Confidence 589999999864
No 148
>PRK05884 short chain dehydrogenase; Provisional
Probab=98.99 E-value=5.6e-09 Score=97.22 Aligned_cols=147 Identities=14% Similarity=0.094 Sum_probs=93.9
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc----CccEEEec
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR----DVDLVVHA 115 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~----~~DvVi~~ 115 (429)
|+++|+||+|.+|+++++.|.++ |++|++.+|+.++++.+.+.+ ++.++++|++|.++++++++ ++|++||+
T Consensus 1 m~vlItGas~giG~~ia~~l~~~--g~~v~~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ 76 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRND--GHKVTLVGARRDDLEVAAKEL--DVDAIVCDNTDPASLEEARGLFPHHLDTIVNV 76 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhc--cCcEEecCCCCHHHHHHHHHHHhhcCcEEEEC
Confidence 37999999999999999999987 899999999998887776654 36788999999998888765 58999999
Q ss_pred CCCCCCCc---hHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecC-----CCccchhHHHHHHHHHHH
Q 014177 116 AGPFQQAP---KCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTG-----GIYPGVSNVMAAELVRVA 187 (429)
Q Consensus 116 agp~~~~~---~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~-----g~~pG~s~~~a~~~~~~~ 187 (429)
+|+....+ ...+.+. .+.--+.++++-...+. ..+.+....++.|..+.+++ ...|+.||.....+++.+
T Consensus 77 ag~~~~~~~~~~~~~~~~-~~~~~~~~~~N~~~~~~-~~~~~~~~~~~~g~Iv~isS~~~~~~~~Y~asKaal~~~~~~l 154 (223)
T PRK05884 77 PAPSWDAGDPRTYSLADT-ANAWRNALDATVLSAVL-TVQSVGDHLRSGGSIISVVPENPPAGSAEAAIKAALSNWTAGQ 154 (223)
T ss_pred CCccccCCCCcccchhcC-HHHHHHHHHHHHHHHHH-HHHHHHHHhhcCCeEEEEecCCCCCccccHHHHHHHHHHHHHH
Confidence 98532100 0011110 01111112222111111 11122222233454444432 234899999999999888
Q ss_pred HhhcC
Q 014177 188 RNESK 192 (429)
Q Consensus 188 ~~~~~ 192 (429)
..++.
T Consensus 155 a~e~~ 159 (223)
T PRK05884 155 AAVFG 159 (223)
T ss_pred HHHhh
Confidence 76654
No 149
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=98.99 E-value=3.6e-09 Score=100.20 Aligned_cols=81 Identities=19% Similarity=0.298 Sum_probs=68.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+.++++||+||+|+||+++++.|+++ |++|++.+|+.++++++.+++. .++..+.+|++|.+++.++++
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~--G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEY--GAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI 84 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 56789999999999999999999997 8999999999888777666553 346778899999998887764
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 85 ~~id~vi~~ag~~ 97 (254)
T PRK08085 85 GPIDVLINNAGIQ 97 (254)
T ss_pred CCCCEEEECCCcC
Confidence 489999999853
No 150
>PRK07035 short chain dehydrogenase; Provisional
Probab=98.98 E-value=3.8e-08 Score=92.97 Aligned_cols=81 Identities=19% Similarity=0.242 Sum_probs=68.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
++++++++|+||+|+||+++++.|+++ |++|++++|+.++++.+.+++. .++.++++|+.|.++++++++
T Consensus 5 ~l~~k~vlItGas~gIG~~l~~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (252)
T PRK07035 5 DLTGKIALVTGASRGIGEAIAKLLAQQ--GAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRER 82 (252)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 366789999999999999999999997 7899999999888777666542 346788999999988876655
Q ss_pred --CccEEEecCCC
Q 014177 108 --DVDLVVHAAGP 118 (429)
Q Consensus 108 --~~DvVi~~agp 118 (429)
++|+|||++|.
T Consensus 83 ~~~id~li~~ag~ 95 (252)
T PRK07035 83 HGRLDILVNNAAA 95 (252)
T ss_pred cCCCCEEEECCCc
Confidence 58999999974
No 151
>PRK09134 short chain dehydrogenase; Provisional
Probab=98.98 E-value=3.5e-09 Score=100.58 Aligned_cols=80 Identities=20% Similarity=0.384 Sum_probs=63.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec-CchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR-NREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R-~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
++|+++|+||+|+||+++++.|+++ ++++++.++ +.++++.+.+.+ +.++.++++|++|.+++.++++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 85 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAH--GFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAAL 85 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4679999999999999999999987 788888765 445555554433 3457889999999998887765
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+||||+|..
T Consensus 86 ~~iD~vi~~ag~~ 98 (258)
T PRK09134 86 GPITLLVNNASLF 98 (258)
T ss_pred CCCCEEEECCcCC
Confidence 479999999864
No 152
>PRK07060 short chain dehydrogenase; Provisional
Probab=98.98 E-value=3.4e-09 Score=99.50 Aligned_cols=79 Identities=24% Similarity=0.316 Sum_probs=68.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---CccEEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---DVDLVV 113 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---~~DvVi 113 (429)
+.+++++|+||+|++|+++++.|+++ |++|++.+|+.++++++.+.. ...++++|++|.+++.++++ ++|+||
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~d~vi 82 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQR--GARVVAAARNAAALDRLAGET--GCEPLRLDVGDDAAIRAALAAAGAFDGLV 82 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHh--CCeEEEecCCCHHHHHHHHHHhCCCCEEE
Confidence 56789999999999999999999997 789999999988887776654 35788999999988888776 589999
Q ss_pred ecCCCC
Q 014177 114 HAAGPF 119 (429)
Q Consensus 114 ~~agp~ 119 (429)
|++|..
T Consensus 83 ~~ag~~ 88 (245)
T PRK07060 83 NCAGIA 88 (245)
T ss_pred ECCCCC
Confidence 999864
No 153
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.98 E-value=5.7e-09 Score=101.48 Aligned_cols=167 Identities=20% Similarity=0.205 Sum_probs=107.1
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch------hHHHHHH-------HhCCCcEEEEeeCC------ChH
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE------KGAAMVS-------TLGKNSEFAEVNIY------NEG 100 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~------~~~~l~~-------~l~~~v~~~~~Dl~------d~~ 100 (429)
++|++||||||+|++++.+|+.+- ..+|++..|..+ ++++... ...++++.+.+|+. +..
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~-~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~ 79 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRS-DAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSER 79 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcC-CCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHH
Confidence 479999999999999999999863 578999888543 2333222 22257889999998 334
Q ss_pred HHHHHhcCccEEEecCCCCC------C------CchHHHHHHHHHcCCc-EEEeCCChhHHH----H-HHhhHHHHHHcC
Q 014177 101 SLLMALRDVDLVVHAAGPFQ------Q------APKCTVLEAAIETKTA-YIDVCDDTIYSQ----R-AKSFKDRAIAAN 162 (429)
Q Consensus 101 ~l~~~~~~~DvVi~~agp~~------~------~~~~~v~~aa~~~gv~-~vdis~~~~~~~----~-~~~~~~~a~~~g 162 (429)
...++.+.+|.|||+++-.+ . .|+..+++.|...+.+ +..+|+-..... . ....++......
T Consensus 80 ~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~ 159 (382)
T COG3320 80 TWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRN 159 (382)
T ss_pred HHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCcccccccccccc
Confidence 56677778999999986332 1 3678899988877665 444443221110 0 001110000000
Q ss_pred CcEEecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCC
Q 014177 163 IPAITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAG 211 (429)
Q Consensus 163 ~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g 211 (429)
... +.-..|+-||+.++++++...+. +.++..+|+.+. .|....|
T Consensus 160 ~~~--~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I-~gds~tG 204 (382)
T COG3320 160 VGQ--GLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYI-TGDSRTG 204 (382)
T ss_pred ccC--ccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCee-eccCccC
Confidence 111 11134999999999999998855 889999998654 4444333
No 154
>PRK12744 short chain dehydrogenase; Provisional
Probab=98.98 E-value=5e-09 Score=99.46 Aligned_cols=82 Identities=17% Similarity=0.272 Sum_probs=62.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc----hhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR----EKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~----~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~- 107 (429)
.+++++++|+||+|+||+++++.|+++ |+++++.+++. +.++.+.+.+ +.++.++++|++|.+++.++++
T Consensus 5 ~l~~k~vlItGa~~gIG~~~a~~l~~~--G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 82 (257)
T PRK12744 5 SLKGKVVLIAGGAKNLGGLIARDLAAQ--GAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDD 82 (257)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHC--CCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHH
Confidence 356789999999999999999999987 78866665432 3344443333 2367889999999998887765
Q ss_pred ------CccEEEecCCCC
Q 014177 108 ------DVDLVVHAAGPF 119 (429)
Q Consensus 108 ------~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 83 ~~~~~~~id~li~~ag~~ 100 (257)
T PRK12744 83 AKAAFGRPDIAINTVGKV 100 (257)
T ss_pred HHHhhCCCCEEEECCccc
Confidence 589999999853
No 155
>PRK06181 short chain dehydrogenase; Provisional
Probab=98.98 E-value=4.1e-09 Score=100.28 Aligned_cols=80 Identities=21% Similarity=0.369 Sum_probs=66.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
+++++|+||+|++|+++++.|+++ +++|++.+|+..+.+.+.+.+ +.++.++.+|++|.+++.++++ +
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~--g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARA--GAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999987 789999999987766655443 3457788999999998887765 6
Q ss_pred ccEEEecCCCCC
Q 014177 109 VDLVVHAAGPFQ 120 (429)
Q Consensus 109 ~DvVi~~agp~~ 120 (429)
+|+||||+|...
T Consensus 79 id~vi~~ag~~~ 90 (263)
T PRK06181 79 IDILVNNAGITM 90 (263)
T ss_pred CCEEEECCCccc
Confidence 899999998654
No 156
>PRK07454 short chain dehydrogenase; Provisional
Probab=98.98 E-value=3.3e-09 Score=99.55 Aligned_cols=81 Identities=20% Similarity=0.341 Sum_probs=67.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-------
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
++++++|+||+|++|+.+++.|+++ |++|++++|+.++.+.+.+.+ +.++.++++|++|.+++.++++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKA--GWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFG 82 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3578999999999999999999997 789999999988776665543 2467889999999998877665
Q ss_pred CccEEEecCCCCC
Q 014177 108 DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ~~DvVi~~agp~~ 120 (429)
++|+|||++|...
T Consensus 83 ~id~lv~~ag~~~ 95 (241)
T PRK07454 83 CPDVLINNAGMAY 95 (241)
T ss_pred CCCEEEECCCccC
Confidence 5899999998643
No 157
>PRK07102 short chain dehydrogenase; Provisional
Probab=98.98 E-value=3.3e-09 Score=99.77 Aligned_cols=79 Identities=19% Similarity=0.293 Sum_probs=66.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh----CCCcEEEEeeCCChHHHHHHhc----Ccc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL----GKNSEFAEVNIYNEGSLLMALR----DVD 110 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l----~~~v~~~~~Dl~d~~~l~~~~~----~~D 110 (429)
||+++|+||+|++|+++++.|+++ |++|++++|+.++.+.+.+.+ ..++.++++|++|.++++++++ ++|
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d 78 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAA--GARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPD 78 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCC
Confidence 578999999999999999999997 789999999988776655443 2467899999999988887765 469
Q ss_pred EEEecCCCC
Q 014177 111 LVVHAAGPF 119 (429)
Q Consensus 111 vVi~~agp~ 119 (429)
+|||++|..
T Consensus 79 ~vv~~ag~~ 87 (243)
T PRK07102 79 IVLIAVGTL 87 (243)
T ss_pred EEEECCcCC
Confidence 999999854
No 158
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=98.98 E-value=9e-09 Score=97.18 Aligned_cols=79 Identities=20% Similarity=0.297 Sum_probs=65.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHh-------cC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMAL-------RD 108 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~-------~~ 108 (429)
++++||+||+|++|+.+++.|+++ |++|++++|+.++.+.+.+.+ +.++.++++|+.|.+++.+++ .+
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAA--GANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGG 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 368999999999999999999987 789999999988777766543 245788999999998665544 46
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+|||+++..
T Consensus 79 ~d~vi~~a~~~ 89 (255)
T TIGR01963 79 LDILVNNAGIQ 89 (255)
T ss_pred CCEEEECCCCC
Confidence 89999999854
No 159
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.97 E-value=1.2e-08 Score=96.58 Aligned_cols=79 Identities=25% Similarity=0.297 Sum_probs=62.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-hhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-------
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-EKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
+|+++|+||+|+||+++++.|+++ |++|++.+|+. +..+...+.+ +.++.++++|++|.+++.++++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAA--GFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWG 79 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 478999999999999999999997 78999999864 3333333332 2467899999999988777654
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
++|+||||+|..
T Consensus 80 ~id~vi~~ag~~ 91 (256)
T PRK12745 80 RIDCLVNNAGVG 91 (256)
T ss_pred CCCEEEECCccC
Confidence 689999999853
No 160
>PRK09242 tropinone reductase; Provisional
Probab=98.97 E-value=5.8e-09 Score=98.93 Aligned_cols=81 Identities=15% Similarity=0.209 Sum_probs=68.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+++|+++|+||+|.||+.+++.|.++ |++|++.+|+.+.++++.+++. .++..+++|++|.+++.++++
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGL--GADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED 84 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 67899999999999999999999997 8899999999888777665542 357788999999887766554
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 85 ~~g~id~li~~ag~~ 99 (257)
T PRK09242 85 HWDGLHILVNNAGGN 99 (257)
T ss_pred HcCCCCEEEECCCCC
Confidence 689999999863
No 161
>PRK08264 short chain dehydrogenase; Validated
Probab=98.97 E-value=2.7e-09 Score=99.91 Aligned_cols=76 Identities=22% Similarity=0.297 Sum_probs=65.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---CccEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---DVDLV 112 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---~~DvV 112 (429)
+++++++|+||+|++|+++++.|+++ |+ +|++.+|+.++++. .+.++.++++|+.|.+++.++++ .+|+|
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~--G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~id~v 77 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLAR--GAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAASDVTIL 77 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence 56689999999999999999999987 77 99999999876554 33468899999999999888776 58999
Q ss_pred EecCCC
Q 014177 113 VHAAGP 118 (429)
Q Consensus 113 i~~agp 118 (429)
||++|.
T Consensus 78 i~~ag~ 83 (238)
T PRK08264 78 VNNAGI 83 (238)
T ss_pred EECCCc
Confidence 999987
No 162
>PRK09072 short chain dehydrogenase; Provisional
Probab=98.97 E-value=4.8e-09 Score=99.95 Aligned_cols=82 Identities=23% Similarity=0.372 Sum_probs=69.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh--CCCcEEEEeeCCChHHHHHHhc------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL--GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l--~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
.+++++++|+||+|++|+.+++.|+++ |++|++++|+.++++.+..++ +.++.++++|++|.+++.++++
T Consensus 2 ~~~~~~vlItG~s~~iG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 79 (263)
T PRK09072 2 DLKDKRVLLTGASGGIGQALAEALAAA--GARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMG 79 (263)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcC
Confidence 356789999999999999999999997 899999999988887776554 2467889999999988777654
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 80 ~id~lv~~ag~~ 91 (263)
T PRK09072 80 GINVLINNAGVN 91 (263)
T ss_pred CCCEEEECCCCC
Confidence 579999999864
No 163
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.97 E-value=2.9e-08 Score=92.98 Aligned_cols=81 Identities=25% Similarity=0.428 Sum_probs=62.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHH---hCCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVST---LGKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~---l~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+++++|+|+||+|++|+++++.|+++ ++++++..|+.. ..+.+... .+.++.++.+|+.|.+++.++++
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARA--GADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVER 81 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999997 788877666543 33333332 23467889999999998887764
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 82 ~~~id~vi~~ag~~ 95 (249)
T PRK12825 82 FGRIDILVNNAGIF 95 (249)
T ss_pred cCCCCEEEECCccC
Confidence 579999999843
No 164
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.97 E-value=5.6e-09 Score=99.41 Aligned_cols=83 Identities=17% Similarity=0.256 Sum_probs=66.1
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec-CchhHHHHHHHh----CCCcEEEEeeCCChHHHHHHhc--
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR-NREKGAAMVSTL----GKNSEFAEVNIYNEGSLLMALR-- 107 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R-~~~~~~~l~~~l----~~~v~~~~~Dl~d~~~l~~~~~-- 107 (429)
.++++|+++|+||+++||+++++.|++. |++|++.+| +.++++.+.+.+ +.++.++++|++|.++++++++
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 81 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQS--GVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKI 81 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 3477899999999999999999999997 889888764 555555554433 2357889999999988877665
Q ss_pred -----CccEEEecCCCC
Q 014177 108 -----DVDLVVHAAGPF 119 (429)
Q Consensus 108 -----~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 82 ~~~~g~id~lv~nAg~~ 98 (260)
T PRK08416 82 DEDFDRVDFFISNAIIS 98 (260)
T ss_pred HHhcCCccEEEECcccc
Confidence 589999999753
No 165
>PRK06914 short chain dehydrogenase; Provisional
Probab=98.97 E-value=2.8e-09 Score=102.46 Aligned_cols=81 Identities=22% Similarity=0.330 Sum_probs=66.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHh-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMAL----- 106 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~----- 106 (429)
|++++++|+||+|++|+++++.|+++ |++|++++|+.+.++.+.+... .++.++.+|++|.+++.+ +
T Consensus 1 ~~~k~~lItGasg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~ 77 (280)
T PRK06914 1 MNKKIAIVTGASSGFGLLTTLELAKK--GYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLK 77 (280)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHH
Confidence 35678999999999999999999997 8999999999887766654321 357889999999988765 3
Q ss_pred --cCccEEEecCCCCC
Q 014177 107 --RDVDLVVHAAGPFQ 120 (429)
Q Consensus 107 --~~~DvVi~~agp~~ 120 (429)
.++|+||||+|...
T Consensus 78 ~~~~id~vv~~ag~~~ 93 (280)
T PRK06914 78 EIGRIDLLVNNAGYAN 93 (280)
T ss_pred hcCCeeEEEECCcccc
Confidence 25799999998643
No 166
>PRK06172 short chain dehydrogenase; Provisional
Probab=98.96 E-value=5.9e-09 Score=98.61 Aligned_cols=81 Identities=22% Similarity=0.385 Sum_probs=67.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+.+++++|+||+|+||+++++.|+++ |++|++.+|+.++++++.+.+ +.++..+++|++|.+++.++++
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFARE--GAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY 82 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 56789999999999999999999987 789999999988766655443 3467889999999988887765
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 83 g~id~li~~ag~~ 95 (253)
T PRK06172 83 GRLDYAFNNAGIE 95 (253)
T ss_pred CCCCEEEECCCCC
Confidence 469999999854
No 167
>PRK06114 short chain dehydrogenase; Provisional
Probab=98.96 E-value=1e-08 Score=97.11 Aligned_cols=83 Identities=17% Similarity=0.232 Sum_probs=66.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
++++++++|+||+|+||+++++.|++. |++|++.+|+.+ .++.+.+.+ +.++..+++|++|.+++.++++
T Consensus 5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 82 (254)
T PRK06114 5 DLDGQVAFVTGAGSGIGQRIAIGLAQA--GADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEA 82 (254)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 367799999999999999999999997 899999998754 344444433 3457789999999998887765
Q ss_pred ---CccEEEecCCCCC
Q 014177 108 ---DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ---~~DvVi~~agp~~ 120 (429)
+.|+||||+|...
T Consensus 83 ~~g~id~li~~ag~~~ 98 (254)
T PRK06114 83 ELGALTLAVNAAGIAN 98 (254)
T ss_pred HcCCCCEEEECCCCCC
Confidence 4799999998643
No 168
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=98.96 E-value=3.8e-09 Score=98.92 Aligned_cols=97 Identities=23% Similarity=0.280 Sum_probs=77.3
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh--HHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK--GAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~--~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+|+||+|.+|+.+++.|++. +++|++..|+..+ .+.+.. ..++.+.+|+.|.+++.++++++|.||.+.++.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~--~~~V~~l~R~~~~~~~~~l~~---~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~ 75 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSA--GFSVRALVRDPSSDRAQQLQA---LGAEVVEADYDDPESLVAALKGVDAVFSVTPPS 75 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHT--TGCEEEEESSSHHHHHHHHHH---TTTEEEES-TT-HHHHHHHHTTCSEEEEESSCS
T ss_pred CEEECCccHHHHHHHHHHHhC--CCCcEEEEeccchhhhhhhhc---ccceEeecccCCHHHHHHHHcCCceEEeecCcc
Confidence 799999999999999999995 8999999998743 333332 357889999999999999999999999998854
Q ss_pred CC---CchHHHHHHHHHcCCcEEEeCC
Q 014177 120 QQ---APKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 120 ~~---~~~~~v~~aa~~~gv~~vdis~ 143 (429)
.. ....++++||.++|++++-.++
T Consensus 76 ~~~~~~~~~~li~Aa~~agVk~~v~ss 102 (233)
T PF05368_consen 76 HPSELEQQKNLIDAAKAAGVKHFVPSS 102 (233)
T ss_dssp CCCHHHHHHHHHHHHHHHT-SEEEESE
T ss_pred hhhhhhhhhhHHHhhhccccceEEEEE
Confidence 22 2347899999999999886553
No 169
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.96 E-value=4.4e-09 Score=113.69 Aligned_cols=136 Identities=22% Similarity=0.302 Sum_probs=92.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEe
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVH 114 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~ 114 (429)
.+.|+||||||+||+|+++++.|.++ +++|... ..|++|.+.+...++ ++|+|||
T Consensus 378 ~~~mkiLVtGa~G~iG~~l~~~L~~~--g~~v~~~---------------------~~~l~d~~~v~~~i~~~~pd~Vih 434 (668)
T PLN02260 378 KPSLKFLIYGRTGWIGGLLGKLCEKQ--GIAYEYG---------------------KGRLEDRSSLLADIRNVKPTHVFN 434 (668)
T ss_pred CCCceEEEECCCchHHHHHHHHHHhC--CCeEEee---------------------ccccccHHHHHHHHHhhCCCEEEE
Confidence 45578999999999999999999986 6776321 135677777777766 7999999
Q ss_pred cCCCCC---C---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHH-------HhhHHHHHHcCCcEEecC
Q 014177 115 AAGPFQ---Q---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRA-------KSFKDRAIAANIPAITTG 169 (429)
Q Consensus 115 ~agp~~---~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~-------~~~~~~a~~~g~~~i~~~ 169 (429)
||+... . .++.+++++|.+.|++.+.++++..|.... .++.|. ..+. ..
T Consensus 435 ~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~----~~~~--~~ 508 (668)
T PLN02260 435 AAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLLMMNFATGCIFEYDAKHPEGSGIGFKEE----DKPN--FT 508 (668)
T ss_pred CCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCeEEEEcccceecCCcccccccCCCCCcC----CCCC--CC
Confidence 997541 0 246789999999999988887655442110 112211 1110 11
Q ss_pred CCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCC
Q 014177 170 GIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGT 207 (429)
Q Consensus 170 g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~ 207 (429)
...||.||++++.++..+. +...+|+.+ .++.
T Consensus 509 ~~~Yg~sK~~~E~~~~~~~-----~~~~~r~~~-~~~~ 540 (668)
T PLN02260 509 GSFYSKTKAMVEELLREYD-----NVCTLRVRM-PISS 540 (668)
T ss_pred CChhhHHHHHHHHHHHhhh-----hheEEEEEE-eccc
Confidence 2569999999999997653 455667644 3543
No 170
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.96 E-value=5.6e-09 Score=98.53 Aligned_cols=80 Identities=20% Similarity=0.316 Sum_probs=65.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec-CchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcC-------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR-NREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRD------- 108 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R-~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~------- 108 (429)
+++++++|+||+|+||+++++.|++. |++|++.++ +.++.+.+...++.++.++++|++|.+++.+++++
T Consensus 3 l~~k~ilItGas~gIG~~la~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 80 (253)
T PRK08642 3 ISEQTVLVTGGSRGLGAAIARAFARE--GARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGK 80 (253)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHC--CCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 45689999999999999999999987 788887654 55666666665555688899999999988877652
Q ss_pred -ccEEEecCCC
Q 014177 109 -VDLVVHAAGP 118 (429)
Q Consensus 109 -~DvVi~~agp 118 (429)
+|++||++|.
T Consensus 81 ~id~li~~ag~ 91 (253)
T PRK08642 81 PITTVVNNALA 91 (253)
T ss_pred CCeEEEECCCc
Confidence 8999999974
No 171
>PRK08628 short chain dehydrogenase; Provisional
Probab=98.96 E-value=3.3e-09 Score=100.62 Aligned_cols=80 Identities=21% Similarity=0.351 Sum_probs=66.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
++++++++|+||+|++|+++++.|+++ |+++++.+|+.++. ++.+.+ +.++.++.+|++|.+++.++++
T Consensus 4 ~l~~~~ilItGasggiG~~la~~l~~~--G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (258)
T PRK08628 4 NLKDKVVIVTGGASGIGAAISLRLAEE--GAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK 80 (258)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHc--CCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 477889999999999999999999997 78999999988765 333332 3467899999999998887775
Q ss_pred --CccEEEecCCC
Q 014177 108 --DVDLVVHAAGP 118 (429)
Q Consensus 108 --~~DvVi~~agp 118 (429)
++|+|||++|.
T Consensus 81 ~~~id~vi~~ag~ 93 (258)
T PRK08628 81 FGRIDGLVNNAGV 93 (258)
T ss_pred cCCCCEEEECCcc
Confidence 58999999985
No 172
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.96 E-value=1.9e-08 Score=95.35 Aligned_cols=80 Identities=16% Similarity=0.235 Sum_probs=63.8
Q ss_pred CCCCeEEEEcCC--hHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh-CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGT--GRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL-GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~--G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l-~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++|+++|+||+ +.||+++++.|++. |++|++.+|+. +.++..+++ ..++..+++|++|.++++++++
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~--G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQ--GATVIYTYQND-RMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERV 81 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHC--CCEEEEecCch-HHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence 677999999998 68999999999997 89999999984 333333333 2357789999999988877654
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 82 g~iD~lv~nAg~~ 94 (252)
T PRK06079 82 GKIDGIVHAIAYA 94 (252)
T ss_pred CCCCEEEEccccc
Confidence 589999999854
No 173
>PRK06484 short chain dehydrogenase; Validated
Probab=98.95 E-value=8.4e-09 Score=108.17 Aligned_cols=81 Identities=20% Similarity=0.315 Sum_probs=71.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
..+++++||||+|.||+++++.|+++ |++|++.+|+.++++.+.+.++.++..+++|++|.+++.++++ .+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAA--GDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRL 344 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 46789999999999999999999997 7899999999998888887776667789999999998887765 58
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|++|||||..
T Consensus 345 d~li~nAg~~ 354 (520)
T PRK06484 345 DVLVNNAGIA 354 (520)
T ss_pred CEEEECCCCc
Confidence 9999999864
No 174
>PRK12827 short chain dehydrogenase; Provisional
Probab=98.95 E-value=1.6e-08 Score=95.11 Aligned_cols=82 Identities=24% Similarity=0.344 Sum_probs=64.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec----CchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc--
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR----NREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR-- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R----~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~-- 107 (429)
+++|+++|+||+|++|+++++.|+++ |++|++.+| +.+..+.+.+++ +.++.++.+|+.|.+++.++++
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 81 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAAD--GADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAG 81 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 56789999999999999999999997 789988765 334444443333 2467889999999998887764
Q ss_pred -----CccEEEecCCCCC
Q 014177 108 -----DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 -----~~DvVi~~agp~~ 120 (429)
++|.|||++|...
T Consensus 82 ~~~~~~~d~vi~~ag~~~ 99 (249)
T PRK12827 82 VEEFGRLDILVNNAGIAT 99 (249)
T ss_pred HHHhCCCCEEEECCCCCC
Confidence 6899999998654
No 175
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.95 E-value=1.9e-08 Score=94.08 Aligned_cols=82 Identities=22% Similarity=0.257 Sum_probs=68.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhc-------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
+++++|+|+||+|++|+++++.|++. |++|++.+|+.++++.+.+.+. .++.++++|++|.+++.++++
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 80 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKE--GAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLN 80 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 56789999999999999999999987 8899999999888776654433 357889999999998877654
Q ss_pred CccEEEecCCCCC
Q 014177 108 DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ~~DvVi~~agp~~ 120 (429)
++|.+||+++.+.
T Consensus 81 ~id~ii~~ag~~~ 93 (238)
T PRK05786 81 AIDGLVVTVGGYV 93 (238)
T ss_pred CCCEEEEcCCCcC
Confidence 4699999997543
No 176
>PRK07985 oxidoreductase; Provisional
Probab=98.95 E-value=9.1e-09 Score=99.96 Aligned_cols=81 Identities=16% Similarity=0.297 Sum_probs=63.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc--hhHHHHHHH---hCCCcEEEEeeCCChHHHHHHhc---
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR--EKGAAMVST---LGKNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~--~~~~~l~~~---l~~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
.+++++++|+||+|+||+++++.|+++ |++|++.+|+. +..+++.+. .+.++.++++|++|.+++.++++
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~--G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 123 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYARE--GADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAH 123 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 466789999999999999999999997 89999887653 334444332 23457789999999988776654
Q ss_pred ----CccEEEecCCC
Q 014177 108 ----DVDLVVHAAGP 118 (429)
Q Consensus 108 ----~~DvVi~~agp 118 (429)
++|++||++|.
T Consensus 124 ~~~g~id~lv~~Ag~ 138 (294)
T PRK07985 124 KALGGLDIMALVAGK 138 (294)
T ss_pred HHhCCCCEEEECCCC
Confidence 57999999985
No 177
>PRK06128 oxidoreductase; Provisional
Probab=98.95 E-value=1.6e-08 Score=98.51 Aligned_cols=81 Identities=20% Similarity=0.320 Sum_probs=63.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch--hHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE--KGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~--~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+++|++||+||+|+||+++++.|++. |++|++..++.+ ..+++.+.+ +.++.++++|++|.++++++++
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~--G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 130 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFARE--GADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVK 130 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHc--CCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 56789999999999999999999997 889988876543 233333322 3457789999999988877764
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 131 ~~g~iD~lV~nAg~~ 145 (300)
T PRK06128 131 ELGGLDILVNIAGKQ 145 (300)
T ss_pred HhCCCCEEEECCccc
Confidence 689999999853
No 178
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.95 E-value=6.4e-09 Score=97.36 Aligned_cols=82 Identities=21% Similarity=0.348 Sum_probs=68.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+|++++++|+||+|++|+.+++.|+++ |++|++.+|++++.+.+...+ +.++.++.+|+.|.+++.++++
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAAD--GAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEA 79 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 466789999999999999999999997 789999999988776655443 2467888999999988877765
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
.+|.|||++|..
T Consensus 80 ~~~id~vi~~ag~~ 93 (246)
T PRK05653 80 FGALDILVNNAGIT 93 (246)
T ss_pred hCCCCEEEECCCcC
Confidence 469999999754
No 179
>PRK05855 short chain dehydrogenase; Validated
Probab=98.95 E-value=4.7e-09 Score=111.13 Aligned_cols=84 Identities=18% Similarity=0.207 Sum_probs=70.9
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc----
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
..+.+++++|+||+|+||+++++.|+++ |++|++++|+.++++++.+.+ +.++.++++|++|.+++.++++
T Consensus 311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 388 (582)
T PRK05855 311 GPFSGKLVVVTGAGSGIGRETALAFARE--GAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRA 388 (582)
T ss_pred ccCCCCEEEEECCcCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4467789999999999999999999997 889999999988877766554 2457889999999998887765
Q ss_pred ---CccEEEecCCCCC
Q 014177 108 ---DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ---~~DvVi~~agp~~ 120 (429)
++|+||||||...
T Consensus 389 ~~g~id~lv~~Ag~~~ 404 (582)
T PRK05855 389 EHGVPDIVVNNAGIGM 404 (582)
T ss_pred hcCCCcEEEECCccCC
Confidence 4899999998643
No 180
>PRK06841 short chain dehydrogenase; Provisional
Probab=98.95 E-value=8.5e-09 Score=97.57 Aligned_cols=81 Identities=19% Similarity=0.297 Sum_probs=65.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh-CCCcEEEEeeCCChHHHHHHhc-------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL-GKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l-~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
++++++++|+||+|+||+++++.|+++ |++|++.+|+.+..+ ....+ ..++..+++|++|.+++.++++
T Consensus 12 ~~~~k~vlItGas~~IG~~la~~l~~~--G~~Vi~~~r~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK06841 12 DLSGKVAVVTGGASGIGHAIAELFAAK--GARVALLDRSEDVAE-VAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFG 88 (255)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHH-HHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 366789999999999999999999997 889999999876433 22332 2356789999999998877765
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 89 ~~d~vi~~ag~~ 100 (255)
T PRK06841 89 RIDILVNSAGVA 100 (255)
T ss_pred CCCEEEECCCCC
Confidence 579999999864
No 181
>PRK06924 short chain dehydrogenase; Provisional
Probab=98.95 E-value=5.2e-09 Score=98.81 Aligned_cols=78 Identities=15% Similarity=0.237 Sum_probs=63.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCc--------
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDV-------- 109 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~-------- 109 (429)
||+++|+||+|++|+++++.|+++ |++|++.+|+. +.++.+.+..+.++.++++|++|.++++++++.+
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 78 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEK--GTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDN 78 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhc--CCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCccc
Confidence 468999999999999999999997 78999999987 4555555444456889999999999888877522
Q ss_pred ---cEEEecCCC
Q 014177 110 ---DLVVHAAGP 118 (429)
Q Consensus 110 ---DvVi~~agp 118 (429)
+++||++|.
T Consensus 79 ~~~~~~v~~ag~ 90 (251)
T PRK06924 79 VSSIHLINNAGM 90 (251)
T ss_pred CCceEEEEccee
Confidence 278899874
No 182
>PRK12939 short chain dehydrogenase; Provisional
Probab=98.94 E-value=8.3e-09 Score=97.13 Aligned_cols=81 Identities=17% Similarity=0.214 Sum_probs=68.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+.+++++|+||+|+||+++++.|+++ |++|++.+|+.++++.+.+.+. .++.++++|++|.+++.++++
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEA--GATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAAL 82 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 55789999999999999999999997 7899999999887776665542 357889999999998887764
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+||||+|..
T Consensus 83 ~~id~vi~~ag~~ 95 (250)
T PRK12939 83 GGLDGLVNNAGIT 95 (250)
T ss_pred CCCCEEEECCCCC
Confidence 689999999864
No 183
>PRK08251 short chain dehydrogenase; Provisional
Probab=98.94 E-value=2.5e-08 Score=93.91 Aligned_cols=79 Identities=14% Similarity=0.261 Sum_probs=66.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc------
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++|+||+|++|+++++.|+++ +++|++.+|+.++++++...+. .++.++++|++|.+++.++++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAK--GRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDEL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 578999999999999999999997 7899999999888776655432 357889999999988776654
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 80 ~~id~vi~~ag~~ 92 (248)
T PRK08251 80 GGLDRVIVNAGIG 92 (248)
T ss_pred CCCCEEEECCCcC
Confidence 689999999753
No 184
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=98.94 E-value=1.4e-08 Score=94.58 Aligned_cols=173 Identities=18% Similarity=0.141 Sum_probs=116.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-HHHH--HHHhCCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-GAAM--VSTLGKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-~~~l--~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
..+..+.|+||+||+|+.++..|.+. |.+|++--|..+. ...+ ..++ +++-+...|+.|+++++++++..++||
T Consensus 59 ~sGiVaTVFGAtGFlGryvvnklak~--GSQviiPyR~d~~~~r~lkvmGdL-GQvl~~~fd~~DedSIr~vvk~sNVVI 135 (391)
T KOG2865|consen 59 VSGIVATVFGATGFLGRYVVNKLAKM--GSQVIIPYRGDEYDPRHLKVMGDL-GQVLFMKFDLRDEDSIRAVVKHSNVVI 135 (391)
T ss_pred ccceEEEEecccccccHHHHHHHhhc--CCeEEEeccCCccchhheeecccc-cceeeeccCCCCHHHHHHHHHhCcEEE
Confidence 34456899999999999999999997 7899987774432 2222 1223 468889999999999999999999999
Q ss_pred ecCCCCCC-----------CchHHHHHHHHHcCC-cEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHH
Q 014177 114 HAAGPFQQ-----------APKCTVLEAAIETKT-AYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAA 181 (429)
Q Consensus 114 ~~agp~~~-----------~~~~~v~~aa~~~gv-~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~ 181 (429)
|+.|--.. .+...+++.|.+.|+ ++|.+|.-.. . +-+++-+--+|..++
T Consensus 136 NLIGrd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lga-----------------n--v~s~Sr~LrsK~~gE 196 (391)
T KOG2865|consen 136 NLIGRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGA-----------------N--VKSPSRMLRSKAAGE 196 (391)
T ss_pred EeeccccccCCcccccccchHHHHHHHHHHhhChhheeehhhccc-----------------c--ccChHHHHHhhhhhH
Confidence 99984321 245788999999998 4565552110 0 111122334677777
Q ss_pred HHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHHHHhCCceEEeeCCeEEEe
Q 014177 182 ELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFLLLGEEVVAYNKGEEITL 237 (429)
Q Consensus 182 ~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~~~~~~~~~v~~~G~~~~v 237 (429)
..++ +.+.+.+++|.+ ..+|..+.--..+.+.+.. -.+++.|..|+-+..
T Consensus 197 ~aVr----dafPeAtIirPa-~iyG~eDrfln~ya~~~rk-~~~~pL~~~GekT~K 246 (391)
T KOG2865|consen 197 EAVR----DAFPEATIIRPA-DIYGTEDRFLNYYASFWRK-FGFLPLIGKGEKTVK 246 (391)
T ss_pred HHHH----hhCCcceeechh-hhcccchhHHHHHHHHHHh-cCceeeecCCcceee
Confidence 7776 457888899984 4577655322223334443 357788888865443
No 185
>PRK12320 hypothetical protein; Provisional
Probab=98.94 E-value=3.9e-09 Score=112.38 Aligned_cols=96 Identities=20% Similarity=0.181 Sum_probs=76.6
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+||||||+||||+++++.|+++ |++|++.+|+.... ...+++++++|+.|.. +.++++++|+|||+|+..
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~--G~~Vi~ldr~~~~~------~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~ 71 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAA--GHTVSGIAQHPHDA------LDPRVDYVCASLRNPV-LQELAGEADAVIHLAPVD 71 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEEeCChhhc------ccCCceEEEccCCCHH-HHHHhcCCCEEEEcCccC
Confidence 47999999999999999999997 79999999875431 1135789999999985 778888999999999754
Q ss_pred CC-------CchHHHHHHHHHcCCcEEEeCCC
Q 014177 120 QQ-------APKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 120 ~~-------~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
.. .++.+++++|.+.|++.|.+|+.
T Consensus 72 ~~~~~~vNv~Gt~nLleAA~~~GvRiV~~SS~ 103 (699)
T PRK12320 72 TSAPGGVGITGLAHVANAAARAGARLLFVSQA 103 (699)
T ss_pred ccchhhHHHHHHHHHHHHHHHcCCeEEEEECC
Confidence 21 23567888998888877766643
No 186
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.94 E-value=8.4e-09 Score=100.82 Aligned_cols=88 Identities=17% Similarity=0.246 Sum_probs=69.6
Q ss_pred CccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-hhHHHHHHHh---CCCcEEEEeeCCChHHHHHHh
Q 014177 31 AHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-EKGAAMVSTL---GKNSEFAEVNIYNEGSLLMAL 106 (429)
Q Consensus 31 ~~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~ 106 (429)
++.+.++++++++|+||+|+||+++++.|+++ |++|++.+++. ++++.+.+++ +.++.++++|++|.+++.+++
T Consensus 4 ~~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~--Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~ 81 (306)
T PRK07792 4 TTNTTDLSGKVAVVTGAAAGLGRAEALGLARL--GATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELV 81 (306)
T ss_pred ccCCcCCCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 34455678899999999999999999999997 88999988753 4455554443 346788999999998888776
Q ss_pred c------CccEEEecCCCCC
Q 014177 107 R------DVDLVVHAAGPFQ 120 (429)
Q Consensus 107 ~------~~DvVi~~agp~~ 120 (429)
+ ++|+|||+||...
T Consensus 82 ~~~~~~g~iD~li~nAG~~~ 101 (306)
T PRK07792 82 ATAVGLGGLDIVVNNAGITR 101 (306)
T ss_pred HHHHHhCCCCEEEECCCCCC
Confidence 4 5899999998643
No 187
>PRK07677 short chain dehydrogenase; Provisional
Probab=98.94 E-value=3.7e-09 Score=100.07 Aligned_cols=79 Identities=15% Similarity=0.255 Sum_probs=66.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc-------C
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
+|+++|+||+|++|+++++.|+++ |++|++.+|+.++++++.+.+. .++.++++|++|.+++.++++ +
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEE--GANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 478999999999999999999997 8899999999887777665442 467889999999988877664 5
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+|||++|..
T Consensus 79 id~lI~~ag~~ 89 (252)
T PRK07677 79 IDALINNAAGN 89 (252)
T ss_pred ccEEEECCCCC
Confidence 79999999853
No 188
>PRK06483 dihydromonapterin reductase; Provisional
Probab=98.94 E-value=5.8e-09 Score=97.63 Aligned_cols=78 Identities=14% Similarity=0.244 Sum_probs=62.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Ccc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DVD 110 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~D 110 (429)
++|+++|+||+|+||+++++.|+++ |++|++.+|+.+......+.. ++.++.+|++|.+++.++++ ++|
T Consensus 1 ~~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 76 (236)
T PRK06483 1 MPAPILITGAGQRIGLALAWHLLAQ--GQPVIVSYRTHYPAIDGLRQA--GAQCIQADFSTNAGIMAFIDELKQHTDGLR 76 (236)
T ss_pred CCceEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHHc--CCEEEEcCCCCHHHHHHHHHHHHhhCCCcc
Confidence 3579999999999999999999987 899999999876543322222 36789999999988777654 489
Q ss_pred EEEecCCCC
Q 014177 111 LVVHAAGPF 119 (429)
Q Consensus 111 vVi~~agp~ 119 (429)
++||++|..
T Consensus 77 ~lv~~ag~~ 85 (236)
T PRK06483 77 AIIHNASDW 85 (236)
T ss_pred EEEECCccc
Confidence 999999853
No 189
>PRK07791 short chain dehydrogenase; Provisional
Probab=98.93 E-value=6.6e-09 Score=100.52 Aligned_cols=82 Identities=21% Similarity=0.287 Sum_probs=66.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc---------hhHHHHHHHh---CCCcEEEEeeCCChHHHHH
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR---------EKGAAMVSTL---GKNSEFAEVNIYNEGSLLM 104 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~---------~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~ 104 (429)
+++++++|+||++.||+++++.|++. |++|++.+|+. ++++.+.+++ +.++.++.+|++|.+++.+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~--G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~ 81 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAE--GARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAAN 81 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHH
Confidence 56789999999999999999999997 88999988875 5566655554 2356788999999988777
Q ss_pred Hhc-------CccEEEecCCCCC
Q 014177 105 ALR-------DVDLVVHAAGPFQ 120 (429)
Q Consensus 105 ~~~-------~~DvVi~~agp~~ 120 (429)
+++ ++|++|||||...
T Consensus 82 ~~~~~~~~~g~id~lv~nAG~~~ 104 (286)
T PRK07791 82 LVDAAVETFGGLDVLVNNAGILR 104 (286)
T ss_pred HHHHHHHhcCCCCEEEECCCCCC
Confidence 654 6899999998643
No 190
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.93 E-value=9.4e-09 Score=98.85 Aligned_cols=80 Identities=14% Similarity=0.196 Sum_probs=64.1
Q ss_pred CCCCeEEEEcCC--hHHHHHHHHHHhHcCCCceEEEEecCc---hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGT--GRVGGSTAVALSKLCPDLQIVVGSRNR---EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~--G~iG~~l~~~L~~~~~g~~v~v~~R~~---~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
|++|.++||||+ +.||+++++.|++. |++|++.+|+. ++++++.++++.. ..+++|++|.++++++++
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~--G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~ 79 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQ--GAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKK 79 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHH
Confidence 567999999996 67999999999997 89999999985 3444454444433 578999999998877764
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|++|||||..
T Consensus 80 ~~g~iDilVnnAG~~ 94 (274)
T PRK08415 80 DLGKIDFIVHSVAFA 94 (274)
T ss_pred HcCCCCEEEECCccC
Confidence 589999999854
No 191
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=98.93 E-value=8.5e-09 Score=97.14 Aligned_cols=80 Identities=19% Similarity=0.297 Sum_probs=63.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEe-cCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGS-RNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~-R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
|+|+++|+||+|++|+.+++.|+++ +++|++.. |+.++++.+.+.+ +.++.++++|++|.+++.++++
T Consensus 1 m~k~ilItGas~giG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (248)
T PRK06947 1 MRKVVLITGASRGIGRATAVLAAAR--GWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAF 78 (248)
T ss_pred CCcEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 3679999999999999999999997 78887754 6666665554443 2467899999999988776654
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 79 ~~id~li~~ag~~ 91 (248)
T PRK06947 79 GRLDALVNNAGIV 91 (248)
T ss_pred CCCCEEEECCccC
Confidence 689999999864
No 192
>PRK06057 short chain dehydrogenase; Provisional
Probab=98.93 E-value=8.9e-09 Score=97.62 Aligned_cols=79 Identities=24% Similarity=0.356 Sum_probs=67.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
|++++|+|+||+|+||+++++.|+++ |++|++.+|+..+++...+.+. ..++++|++|.++++++++ ++
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAE--GATVVVGDIDPEAGKAAADEVG--GLFVPTDVTDEDAVNALFDTAAETYGSV 80 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHcC--CcEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 77899999999999999999999997 8999999999887776666553 3678999999998887775 57
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|+|||++|..
T Consensus 81 d~vi~~ag~~ 90 (255)
T PRK06057 81 DIAFNNAGIS 90 (255)
T ss_pred CEEEECCCcC
Confidence 9999999854
No 193
>PRK12828 short chain dehydrogenase; Provisional
Probab=98.93 E-value=1.2e-08 Score=95.29 Aligned_cols=81 Identities=19% Similarity=0.272 Sum_probs=66.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhc-------C
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
+++++++|+||+|++|+.+++.|+++ |++|++.+|+.++..+..+++. ...+.+.+|+.|.+++.++++ +
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAAR--GARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGR 82 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHC--CCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 45689999999999999999999997 8999999998877655444332 346788899999988877665 6
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+|||++|..
T Consensus 83 ~d~vi~~ag~~ 93 (239)
T PRK12828 83 LDALVNIAGAF 93 (239)
T ss_pred cCEEEECCccc
Confidence 89999999854
No 194
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=98.93 E-value=2e-08 Score=94.26 Aligned_cols=79 Identities=23% Similarity=0.349 Sum_probs=63.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEE-EecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-------
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVV-GSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v-~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
|++++|+||+|+||+++++.|+++ |++|++ ..|+.++.++....+ +.++..+++|++|.+++.++++
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 78 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQE--GYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDE 78 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 468999999999999999999987 788876 467776666554433 2357789999999998888766
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 79 ~id~vi~~ag~~ 90 (247)
T PRK09730 79 PLAALVNNAGIL 90 (247)
T ss_pred CCCEEEECCCCC
Confidence 468999999864
No 195
>PRK08862 short chain dehydrogenase; Provisional
Probab=98.92 E-value=1.1e-08 Score=95.54 Aligned_cols=81 Identities=9% Similarity=0.156 Sum_probs=68.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
++++++++|+||++.+|+++++.|+++ |++|++.+|+.++++++.+++ +.++..+++|+.|.++++++++
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~--G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARL--GATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQ 79 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHH
Confidence 366789999999999999999999997 899999999999887776544 2356778899999998877653
Q ss_pred ---CccEEEecCCC
Q 014177 108 ---DVDLVVHAAGP 118 (429)
Q Consensus 108 ---~~DvVi~~agp 118 (429)
++|++||++|.
T Consensus 80 ~g~~iD~li~nag~ 93 (227)
T PRK08862 80 FNRAPDVLVNNWTS 93 (227)
T ss_pred hCCCCCEEEECCcc
Confidence 58999999973
No 196
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=98.92 E-value=1e-08 Score=97.11 Aligned_cols=81 Identities=17% Similarity=0.195 Sum_probs=63.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch--hHHHHHHHhCCCcEEEEeeCCChHHHHHHhc------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE--KGAAMVSTLGKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~--~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
++++++++|+||+|.||+++++.|++. |++|++.+++.. ..+++ ..++.++..+++|++|.+++.++++
T Consensus 7 ~l~~k~~lItG~~~gIG~a~a~~l~~~--G~~vv~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (253)
T PRK08993 7 SLEGKVAVVTGCDTGLGQGMALGLAEA--GCDIVGINIVEPTETIEQV-TALGRRFLSLTADLRKIDGIPALLERAVAEF 83 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEecCcchHHHHHHH-HhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 477899999999999999999999997 889988877542 12222 2233457788999999988887775
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|++|||||..
T Consensus 84 ~~~D~li~~Ag~~ 96 (253)
T PRK08993 84 GHIDILVNNAGLI 96 (253)
T ss_pred CCCCEEEECCCCC
Confidence 589999999854
No 197
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=98.92 E-value=2.5e-08 Score=94.55 Aligned_cols=153 Identities=19% Similarity=0.137 Sum_probs=104.6
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC----CcEEEEeeCCChHH----HHHHh
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK----NSEFAEVNIYNEGS----LLMAL 106 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~----~v~~~~~Dl~d~~~----l~~~~ 106 (429)
+++. +=.+|+||+..||++.+++|+++ |++|++.+|+.+|++++++++.+ .+.++.+|.++.+. +.+.+
T Consensus 46 ~~~g-~WAVVTGaTDGIGKayA~eLAkr--G~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l 122 (312)
T KOG1014|consen 46 EKLG-SWAVVTGATDGIGKAYARELAKR--GFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKL 122 (312)
T ss_pred HhcC-CEEEEECCCCcchHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHh
Confidence 3344 66899999999999999999998 89999999999999999888752 36778899987664 55555
Q ss_pred cC--ccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHH--HHHHhhHHHHHHcCCcEEecCCCc---------c
Q 014177 107 RD--VDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYS--QRAKSFKDRAIAANIPAITTGGIY---------P 173 (429)
Q Consensus 107 ~~--~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~--~~~~~~~~~a~~~g~~~i~~~g~~---------p 173 (429)
.+ +-++|||+|...... ..+.+.-...-.+.+.++...... +...+ ....+.+|..+.+|++.. |
T Consensus 123 ~~~~VgILVNNvG~~~~~P-~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp-~M~~r~~G~IvnigS~ag~~p~p~~s~y 200 (312)
T KOG1014|consen 123 AGLDVGILVNNVGMSYDYP-ESFLKYPEGELQNIINVNILSVTLLTQLILP-GMVERKKGIIVNIGSFAGLIPTPLLSVY 200 (312)
T ss_pred cCCceEEEEecccccCCCc-HHHHhCchhhhhheeEEecchHHHHHHHhhh-hhhcCCCceEEEeccccccccChhHHHH
Confidence 54 557999999877543 355554332223455555443322 22221 222346676666665433 6
Q ss_pred chhHHHHHHHHHHHHhhcC
Q 014177 174 GVSNVMAAELVRVARNESK 192 (429)
Q Consensus 174 G~s~~~a~~~~~~~~~~~~ 192 (429)
.+||.+.++..+.+.+|+.
T Consensus 201 sasK~~v~~~S~~L~~Ey~ 219 (312)
T KOG1014|consen 201 SASKAFVDFFSRCLQKEYE 219 (312)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 6678877777777666554
No 198
>PRK05599 hypothetical protein; Provisional
Probab=98.92 E-value=1e-08 Score=96.94 Aligned_cols=78 Identities=22% Similarity=0.348 Sum_probs=65.4
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC----CCcEEEEeeCCChHHHHHHhc-------C
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG----KNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~----~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
|.++|+||++.||.++++.|. + +++|++++|+.++++++.+++. ..+.++++|++|.++++++++ +
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~--g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 77 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-H--GEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGE 77 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-C--CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCC
Confidence 579999999999999999998 4 6899999999998887766653 236789999999988877654 6
Q ss_pred ccEEEecCCCCC
Q 014177 109 VDLVVHAAGPFQ 120 (429)
Q Consensus 109 ~DvVi~~agp~~ 120 (429)
.|++||++|...
T Consensus 78 id~lv~nag~~~ 89 (246)
T PRK05599 78 ISLAVVAFGILG 89 (246)
T ss_pred CCEEEEecCcCC
Confidence 899999998753
No 199
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=98.91 E-value=1.1e-09 Score=96.72 Aligned_cols=80 Identities=23% Similarity=0.412 Sum_probs=66.2
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC--chhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc-------
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN--REKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~--~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
|.++|+||++.+|+.+++.|+++ .+..|++.+|+ .+..+.+.+++. .++.++++|+++.++++++++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~-g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARR-GARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFG 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT-TTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHhc-CceEEEEeeecccccccccccccccccccccccccccccccccccccccccccccc
Confidence 57999999999999999999997 35688889998 566666655443 568899999999998888765
Q ss_pred CccEEEecCCCCC
Q 014177 108 DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ~~DvVi~~agp~~ 120 (429)
..|++|||+|...
T Consensus 80 ~ld~li~~ag~~~ 92 (167)
T PF00106_consen 80 PLDILINNAGIFS 92 (167)
T ss_dssp SESEEEEECSCTT
T ss_pred ccccccccccccc
Confidence 6899999998765
No 200
>PRK05650 short chain dehydrogenase; Provisional
Probab=98.91 E-value=9.7e-09 Score=98.26 Aligned_cols=79 Identities=19% Similarity=0.379 Sum_probs=66.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
|+++|+||+|+||+++++.|+++ |++|++.+|+.++++.+.+.+ +.++.++++|++|.+++.++++ ++
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 78 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWARE--GWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGI 78 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 47999999999999999999997 899999999988877665543 2467889999999988877765 68
Q ss_pred cEEEecCCCCC
Q 014177 110 DLVVHAAGPFQ 120 (429)
Q Consensus 110 DvVi~~agp~~ 120 (429)
|+|||++|...
T Consensus 79 d~lI~~ag~~~ 89 (270)
T PRK05650 79 DVIVNNAGVAS 89 (270)
T ss_pred CEEEECCCCCC
Confidence 99999998643
No 201
>PRK07831 short chain dehydrogenase; Provisional
Probab=98.91 E-value=1e-08 Score=97.56 Aligned_cols=82 Identities=20% Similarity=0.236 Sum_probs=66.9
Q ss_pred CCCCCeEEEEcCCh-HHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh----C-CCcEEEEeeCCChHHHHHHhc--
Q 014177 36 KNRNARVLVLGGTG-RVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL----G-KNSEFAEVNIYNEGSLLMALR-- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G-~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l----~-~~v~~~~~Dl~d~~~l~~~~~-- 107 (429)
.+++++++|+||+| .||+++++.|+++ |++|++.+|+.++++...+.+ + .++.++++|++|.++++++++
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 91 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEE--GARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAA 91 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence 35678999999987 6999999999987 789999999988776655443 2 257789999999988877664
Q ss_pred -----CccEEEecCCCC
Q 014177 108 -----DVDLVVHAAGPF 119 (429)
Q Consensus 108 -----~~DvVi~~agp~ 119 (429)
++|+||||+|..
T Consensus 92 ~~~~g~id~li~~ag~~ 108 (262)
T PRK07831 92 VERLGRLDVLVNNAGLG 108 (262)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 579999999853
No 202
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.91 E-value=1.6e-08 Score=95.86 Aligned_cols=79 Identities=20% Similarity=0.268 Sum_probs=63.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTLGKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
.+.+|+++|+||+|+||+++++.|+++ |++|++.+++.+ ..+.+.. .++.++++|++|.+++.++++
T Consensus 4 ~l~~k~~lItGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~l~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 78 (255)
T PRK06463 4 RFKGKVALITGGTRGIGRAIAEAFLRE--GAKVAVLYNSAENEAKELRE---KGVFTIKCDVGNRDQVKKSKEVVEKEFG 78 (255)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCcHHHHHHHHh---CCCeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 356789999999999999999999997 789888776543 3334432 247889999999998888765
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
++|+||||+|..
T Consensus 79 ~id~li~~ag~~ 90 (255)
T PRK06463 79 RVDVLVNNAGIM 90 (255)
T ss_pred CCCEEEECCCcC
Confidence 589999999864
No 203
>PRK08703 short chain dehydrogenase; Provisional
Probab=98.90 E-value=1.2e-07 Score=88.87 Aligned_cols=81 Identities=19% Similarity=0.258 Sum_probs=63.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC----CCcEEEEeeCCC--hHHHHHHh----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG----KNSEFAEVNIYN--EGSLLMAL---- 106 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~----~~v~~~~~Dl~d--~~~l~~~~---- 106 (429)
|++++++|+||+|++|+++++.|+++ |++|++.+|+.++++.+.+++. ..+.++.+|+.| .+++.+++
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~ 81 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAA--GATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIA 81 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHc--CCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHH
Confidence 66789999999999999999999987 8899999999988777665542 245678899975 33444332
Q ss_pred ----cCccEEEecCCCC
Q 014177 107 ----RDVDLVVHAAGPF 119 (429)
Q Consensus 107 ----~~~DvVi~~agp~ 119 (429)
.++|+||||||..
T Consensus 82 ~~~~~~id~vi~~ag~~ 98 (239)
T PRK08703 82 EATQGKLDGIVHCAGYF 98 (239)
T ss_pred HHhCCCCCEEEEecccc
Confidence 3679999999853
No 204
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=98.90 E-value=5.1e-09 Score=101.07 Aligned_cols=93 Identities=19% Similarity=0.294 Sum_probs=75.9
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHh------cC-ccEEE
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMAL------RD-VDLVV 113 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~------~~-~DvVi 113 (429)
+|+|+||+|++|+++++.|+++ +++|++..|++++... .+++.+.+|+.|.+++.+++ ++ +|.|+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~--g~~V~~~~R~~~~~~~------~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~ 72 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAA--SVPFLVASRSSSSSAG------PNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVY 72 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhC--CCcEEEEeCCCccccC------CCCccccccCCCHHHHHHHHhcccCcCCceeEEE
Confidence 4899999999999999999997 7999999999876421 35677889999999999988 56 99999
Q ss_pred ecCCCCCC--CchHHHHHHHHHcCCcEEEe
Q 014177 114 HAAGPFQQ--APKCTVLEAAIETKTAYIDV 141 (429)
Q Consensus 114 ~~agp~~~--~~~~~v~~aa~~~gv~~vdi 141 (429)
++++.... ....+++++|.++|++++-.
T Consensus 73 ~~~~~~~~~~~~~~~~i~aa~~~gv~~~V~ 102 (285)
T TIGR03649 73 LVAPPIPDLAPPMIKFIDFARSKGVRRFVL 102 (285)
T ss_pred EeCCCCCChhHHHHHHHHHHHHcCCCEEEE
Confidence 99875432 12357899999999976533
No 205
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=98.89 E-value=9.5e-09 Score=96.75 Aligned_cols=82 Identities=21% Similarity=0.349 Sum_probs=65.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEe-cCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhcC----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGS-RNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALRD---- 108 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~-R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~~---- 108 (429)
+++++++|+||+|++|+++++.|+++ +++|++.. |+.+..+++.+.+. .++.++++|++|.+++.+++++
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQE--GAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNH 81 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999997 78887754 45555555544432 3578899999999988887763
Q ss_pred ---ccEEEecCCCCC
Q 014177 109 ---VDLVVHAAGPFQ 120 (429)
Q Consensus 109 ---~DvVi~~agp~~ 120 (429)
+|+||||+|...
T Consensus 82 ~~~id~vi~~ag~~~ 96 (247)
T PRK12935 82 FGKVDILVNNAGITR 96 (247)
T ss_pred cCCCCEEEECCCCCC
Confidence 799999998643
No 206
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=98.89 E-value=1.4e-08 Score=96.21 Aligned_cols=82 Identities=26% Similarity=0.317 Sum_probs=69.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
++.+++++|+||+|+||+.+++.|+++ |++|++.+|+.++++.+.+++ +.++.++.+|++|.+++.++++
T Consensus 8 ~~~~k~ilItGas~~IG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (256)
T PRK06124 8 SLAGQVALVTGSARGLGFEIARALAGA--GAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE 85 (256)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 367899999999999999999999987 899999999988777666544 2457899999999988877665
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 86 ~~~id~vi~~ag~~ 99 (256)
T PRK06124 86 HGRLDILVNNVGAR 99 (256)
T ss_pred cCCCCEEEECCCCC
Confidence 469999999854
No 207
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=98.89 E-value=7e-09 Score=111.79 Aligned_cols=82 Identities=24% Similarity=0.344 Sum_probs=69.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc---
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
.+.+|+++||||+|+||+++++.|+++ |++|++.+|+.++++.+.+.+. .++..+++|++|.+++.++++
T Consensus 411 ~l~gkvvLVTGasggIG~aiA~~La~~--Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~ 488 (676)
T TIGR02632 411 TLARRVAFVTGGAGGIGRETARRLAAE--GAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVA 488 (676)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 366799999999999999999999997 8999999999887776655432 246688999999998888776
Q ss_pred ----CccEEEecCCCC
Q 014177 108 ----DVDLVVHAAGPF 119 (429)
Q Consensus 108 ----~~DvVi~~agp~ 119 (429)
++|+||||||..
T Consensus 489 ~~~g~iDilV~nAG~~ 504 (676)
T TIGR02632 489 LAYGGVDIVVNNAGIA 504 (676)
T ss_pred HhcCCCcEEEECCCCC
Confidence 689999999864
No 208
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=98.88 E-value=8.9e-09 Score=97.17 Aligned_cols=76 Identities=14% Similarity=0.152 Sum_probs=63.5
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
.+++|+++|+||+|++|+.+++.|+++ |++|++.+|+. . ...+.++.++++|++|.+++.++++ +
T Consensus 5 ~~~~k~vlItGas~~iG~~la~~l~~~--G~~v~~~~~~~--~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (252)
T PRK08220 5 DFSGKTVWVTGAAQGIGYAVALAFVEA--GAKVIGFDQAF--L----TQEDYPFATFVLDVSDAAAVAQVCQRLLAETGP 76 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEecch--h----hhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 366789999999999999999999997 89999999986 1 1123467889999999998888775 4
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+||||+|..
T Consensus 77 id~vi~~ag~~ 87 (252)
T PRK08220 77 LDVLVNAAGIL 87 (252)
T ss_pred CCEEEECCCcC
Confidence 79999999864
No 209
>PRK12742 oxidoreductase; Provisional
Probab=98.88 E-value=1.5e-08 Score=94.66 Aligned_cols=79 Identities=15% Similarity=0.272 Sum_probs=64.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec-CchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---CccEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR-NREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---DVDLV 112 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R-~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---~~DvV 112 (429)
+++++|+|+||+|+||+++++.|+++ |++|++.++ +.++++++..++ .+.++.+|++|.+++.++++ ++|++
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~l~~~~--~~~~~~~D~~~~~~~~~~~~~~~~id~l 79 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTD--GANVRFTYAGSKDAAERLAQET--GATAVQTDSADRDAVIDVVRKSGALDIL 79 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCCHHHHHHHHHHh--CCeEEecCCCCHHHHHHHHHHhCCCcEE
Confidence 66789999999999999999999987 788888765 556666665544 35778899999888877765 48999
Q ss_pred EecCCCC
Q 014177 113 VHAAGPF 119 (429)
Q Consensus 113 i~~agp~ 119 (429)
||++|..
T Consensus 80 i~~ag~~ 86 (237)
T PRK12742 80 VVNAGIA 86 (237)
T ss_pred EECCCCC
Confidence 9999854
No 210
>PRK12747 short chain dehydrogenase; Provisional
Probab=98.87 E-value=1.3e-08 Score=96.25 Aligned_cols=81 Identities=16% Similarity=0.193 Sum_probs=61.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEe-cCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGS-RNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~-R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+++|+++|+||+|+||+++++.|++. |++|++.+ |+.++++....++ +..+..+++|++|.+++..+++
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLAND--GALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNE 79 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999997 88888865 5556655554443 2346678899999876654332
Q ss_pred --------CccEEEecCCCC
Q 014177 108 --------DVDLVVHAAGPF 119 (429)
Q Consensus 108 --------~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 80 ~~~~~g~~~id~lv~~Ag~~ 99 (252)
T PRK12747 80 LQNRTGSTKFDILINNAGIG 99 (252)
T ss_pred hhhhcCCCCCCEEEECCCcC
Confidence 589999999853
No 211
>PRK06125 short chain dehydrogenase; Provisional
Probab=98.87 E-value=1.9e-08 Score=95.65 Aligned_cols=81 Identities=20% Similarity=0.331 Sum_probs=68.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh----CCCcEEEEeeCCChHHHHHHhc---Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL----GKNSEFAEVNIYNEGSLLMALR---DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l----~~~v~~~~~Dl~d~~~l~~~~~---~~ 109 (429)
+.+++++|+||+|.+|+.+++.|+++ |++|++.+|+.++++.+.+.+ +.++.++.+|++|.+++.++++ ++
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~i 82 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAE--GCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDI 82 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCC
Confidence 56789999999999999999999997 889999999988877765544 2357889999999998887765 69
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|++|||+|..
T Consensus 83 d~lv~~ag~~ 92 (259)
T PRK06125 83 DILVNNAGAI 92 (259)
T ss_pred CEEEECCCCC
Confidence 9999999854
No 212
>PRK07023 short chain dehydrogenase; Provisional
Probab=98.87 E-value=2e-08 Score=94.37 Aligned_cols=77 Identities=18% Similarity=0.288 Sum_probs=61.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-----------
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR----------- 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~----------- 107 (429)
|++++|+||+|++|+++++.|+++ |++|++++|+.++. +....+.++.++++|++|.++++++++
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~--G~~v~~~~r~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQP--GIAVLGVARSRHPS--LAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA 76 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhC--CCEEEEEecCcchh--hhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence 468999999999999999999987 89999999986542 222233467889999999988877432
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
+.|++|||+|..
T Consensus 77 ~~~~~v~~ag~~ 88 (243)
T PRK07023 77 SRVLLINNAGTV 88 (243)
T ss_pred CceEEEEcCccc
Confidence 478999999864
No 213
>PRK06523 short chain dehydrogenase; Provisional
Probab=98.87 E-value=1.4e-08 Score=96.45 Aligned_cols=75 Identities=28% Similarity=0.437 Sum_probs=62.6
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++++++|+||+|+||+++++.|+++ |++|++.+|+.+.. ...++.++++|++|.+++.++++ +
T Consensus 6 ~~~~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~r~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 77 (260)
T PRK06523 6 ELAGKRALVTGGTKGIGAATVARLLEA--GARVVTTARSRPDD------LPEGVEFVAADLTTAEGCAAVARAVLERLGG 77 (260)
T ss_pred CCCCCEEEEECCCCchhHHHHHHHHHC--CCEEEEEeCChhhh------cCCceeEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 467899999999999999999999997 89999999986531 22457889999999987776543 6
Q ss_pred ccEEEecCCC
Q 014177 109 VDLVVHAAGP 118 (429)
Q Consensus 109 ~DvVi~~agp 118 (429)
+|+|||+||.
T Consensus 78 id~vi~~ag~ 87 (260)
T PRK06523 78 VDILVHVLGG 87 (260)
T ss_pred CCEEEECCcc
Confidence 8999999985
No 214
>PRK12937 short chain dehydrogenase; Provisional
Probab=98.86 E-value=2.5e-08 Score=93.59 Aligned_cols=81 Identities=16% Similarity=0.296 Sum_probs=64.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+++++++|+||+|++|+++++.|+++ |+++++..|+.+ ..+.+.+.+ +.++.++++|++|.+++.++++
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAAD--GFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA 80 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999997 788887776543 334443332 3467889999999998888776
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 81 ~~~id~vi~~ag~~ 94 (245)
T PRK12937 81 FGRIDVLVNNAGVM 94 (245)
T ss_pred cCCCCEEEECCCCC
Confidence 689999999854
No 215
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.86 E-value=7.9e-08 Score=90.60 Aligned_cols=80 Identities=20% Similarity=0.223 Sum_probs=60.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC-chhHHHHHHH---hCCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN-REKGAAMVST---LGKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~-~~~~~~l~~~---l~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+.+++++|+||+|+||+++++.|+++ ++++++..|+ .+........ .+.++..+.+|+++.+++..+++
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKE--GSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR 81 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence 55789999999999999999999987 7888776653 3333332222 22346688999999998877665
Q ss_pred --CccEEEecCCC
Q 014177 108 --DVDLVVHAAGP 118 (429)
Q Consensus 108 --~~DvVi~~agp 118 (429)
++|+|||++|.
T Consensus 82 ~~~~d~vi~~ag~ 94 (252)
T PRK06077 82 YGVADILVNNAGL 94 (252)
T ss_pred cCCCCEEEECCCC
Confidence 57999999985
No 216
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=98.86 E-value=2.1e-08 Score=94.98 Aligned_cols=81 Identities=20% Similarity=0.289 Sum_probs=67.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+.+++|+|+||+|+||+++++.|.++ |+++++.+|+.++.+.+.+.+ +.++.++.+|++|.+++.++++
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~--G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATA--GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKL 86 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 66899999999999999999999997 889999999988777665543 2357788999999998877654
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|++|||+|..
T Consensus 87 ~~~d~li~~ag~~ 99 (255)
T PRK06113 87 GKVDILVNNAGGG 99 (255)
T ss_pred CCCCEEEECCCCC
Confidence 579999999853
No 217
>PRK08303 short chain dehydrogenase; Provisional
Probab=98.86 E-value=2.3e-08 Score=97.66 Aligned_cols=80 Identities=21% Similarity=0.249 Sum_probs=64.5
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc----------hhHHHHHHHh---CCCcEEEEeeCCChHHH
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR----------EKGAAMVSTL---GKNSEFAEVNIYNEGSL 102 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~----------~~~~~l~~~l---~~~v~~~~~Dl~d~~~l 102 (429)
++++|.++|+||++.||+++++.|++. |++|++.+|+. ++++.+.+.+ +.++.++++|++|.+++
T Consensus 5 ~l~~k~~lITGgs~GIG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v 82 (305)
T PRK08303 5 PLRGKVALVAGATRGAGRGIAVELGAA--GATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQV 82 (305)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence 367799999999999999999999997 89999999973 3444444333 23567889999999988
Q ss_pred HHHhc-------CccEEEecC-C
Q 014177 103 LMALR-------DVDLVVHAA-G 117 (429)
Q Consensus 103 ~~~~~-------~~DvVi~~a-g 117 (429)
+++++ ++|++||++ |
T Consensus 83 ~~~~~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 83 RALVERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHHHHHcCCccEEEECCcc
Confidence 87764 589999999 6
No 218
>PLN02503 fatty acyl-CoA reductase 2
Probab=98.86 E-value=2e-08 Score=105.70 Aligned_cols=125 Identities=16% Similarity=0.188 Sum_probs=88.4
Q ss_pred ccccccccccCCccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchh---HHHHHHH-----------
Q 014177 20 TSATKETVLDGAHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREK---GAAMVST----------- 84 (429)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~---~~~l~~~----------- 84 (429)
.|++..-+.++..-.+.+++++|+|||||||+|+++++.|++.+++. +|.+..|.... .+++.++
T Consensus 100 ~~~~~~~~~~~~~I~~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~ 179 (605)
T PLN02503 100 GSSSAVEMADGIGIAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQ 179 (605)
T ss_pred CCCchhhccCCcchhhhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHH
Confidence 44555666777777777899999999999999999999999865553 78888885432 2222111
Q ss_pred --h--------CCCcEEEEeeCCCh------HHHHHHhcCccEEEecCCCCCC------------CchHHHHHHHHHcC-
Q 014177 85 --L--------GKNSEFAEVNIYNE------GSLLMALRDVDLVVHAAGPFQQ------------APKCTVLEAAIETK- 135 (429)
Q Consensus 85 --l--------~~~v~~~~~Dl~d~------~~l~~~~~~~DvVi~~agp~~~------------~~~~~v~~aa~~~g- 135 (429)
. ..++..+.+|++++ +..+.+.+++|+|||+|+.... .++.+++++|.+.+
T Consensus 180 ~~~g~~~~~~~~~Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~ 259 (605)
T PLN02503 180 ETHGKSYQSFMLSKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKK 259 (605)
T ss_pred HhcCccccccccccEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 0 13578899999986 3566666789999999976432 24678899998764
Q ss_pred Cc-EEEeCCC
Q 014177 136 TA-YIDVCDD 144 (429)
Q Consensus 136 v~-~vdis~~ 144 (429)
.+ ++.+|+.
T Consensus 260 lk~fV~vSTa 269 (605)
T PLN02503 260 LKLFLQVSTA 269 (605)
T ss_pred CCeEEEccCc
Confidence 33 4555543
No 219
>PRK07904 short chain dehydrogenase; Provisional
Probab=98.85 E-value=5.8e-08 Score=92.18 Aligned_cols=82 Identities=21% Similarity=0.313 Sum_probs=65.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-HHHHHHHhC----CCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-GAAMVSTLG----KNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-~~~l~~~l~----~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
-..++|+|+||+|++|+++++.|++++ +++|++.+|+.++ ++++.+++. .++.++++|++|.+++.++++
T Consensus 6 ~~~~~vlItGas~giG~~la~~l~~~g-g~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 6 GNPQTILLLGGTSEIGLAICERYLKNA-PARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred CCCcEEEEEcCCcHHHHHHHHHHHhcC-CCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence 356789999999999999999999862 4899999999876 666555442 257899999999887655443
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|++||++|..
T Consensus 85 ~g~id~li~~ag~~ 98 (253)
T PRK07904 85 GGDVDVAIVAFGLL 98 (253)
T ss_pred cCCCCEEEEeeecC
Confidence 699999999864
No 220
>PRK06198 short chain dehydrogenase; Provisional
Probab=98.85 E-value=2.9e-08 Score=94.19 Aligned_cols=81 Identities=28% Similarity=0.394 Sum_probs=66.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCce-EEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQ-IVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~-v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+++++++|+||+|+||+.+++.|.++ |++ |++.+|+.++.+...+.+ +.++.++.+|++|.+++.++++
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~--G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAER--GAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEA 81 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 66789999999999999999999987 787 999999887766554433 2356778999999988877765
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 82 ~g~id~li~~ag~~ 95 (260)
T PRK06198 82 FGRLDALVNAAGLT 95 (260)
T ss_pred hCCCCEEEECCCcC
Confidence 589999999864
No 221
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=98.85 E-value=3.7e-08 Score=92.81 Aligned_cols=81 Identities=17% Similarity=0.264 Sum_probs=63.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC----CCcEEEEeeCC--ChHHHHHHh---
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG----KNSEFAEVNIY--NEGSLLMAL--- 106 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~----~~v~~~~~Dl~--d~~~l~~~~--- 106 (429)
.+++++++|+||+|++|.++++.|++. |++|++.+|+.++++.+.+++. .++.++.+|++ +.+++.+++
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARH--GATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHC--CCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 357799999999999999999999997 7899999999887776655542 34667788886 444444433
Q ss_pred ----cCccEEEecCCC
Q 014177 107 ----RDVDLVVHAAGP 118 (429)
Q Consensus 107 ----~~~DvVi~~agp 118 (429)
.++|+|||+|+.
T Consensus 87 ~~~~~~id~vi~~Ag~ 102 (247)
T PRK08945 87 EEQFGRLDGVLHNAGL 102 (247)
T ss_pred HHHhCCCCEEEECCcc
Confidence 368999999975
No 222
>PRK08226 short chain dehydrogenase; Provisional
Probab=98.85 E-value=1.9e-08 Score=95.71 Aligned_cols=80 Identities=16% Similarity=0.297 Sum_probs=64.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+.+++++|+||+|+||+++++.|+++ |++|++++|+.+. .+..+.+ +.++.++++|++|.++++++++
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~--G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 80 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARH--GANLILLDISPEI-EKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE 80 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEecCCHHH-HHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999997 8999999998753 2222222 2357789999999988887765
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 81 ~~id~vi~~ag~~ 93 (263)
T PRK08226 81 GRIDILVNNAGVC 93 (263)
T ss_pred CCCCEEEECCCcC
Confidence 579999999853
No 223
>PRK08324 short chain dehydrogenase; Validated
Probab=98.85 E-value=2.4e-08 Score=108.04 Aligned_cols=82 Identities=26% Similarity=0.325 Sum_probs=70.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC--CcEEEEeeCCChHHHHHHhc------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK--NSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~--~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
.+.+++++|+||+|+||+++++.|.++ |++|++++|+.++++.+.+.+.. ++.++++|++|.+++.++++
T Consensus 419 ~l~gk~vLVTGasggIG~~la~~L~~~--Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~ 496 (681)
T PRK08324 419 PLAGKVALVTGAAGGIGKATAKRLAAE--GACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAF 496 (681)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHC--cCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 356789999999999999999999987 78999999999888777766543 67889999999998877665
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+||||+|..
T Consensus 497 g~iDvvI~~AG~~ 509 (681)
T PRK08324 497 GGVDIVVSNAGIA 509 (681)
T ss_pred CCCCEEEECCCCC
Confidence 689999999854
No 224
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.85 E-value=7.2e-08 Score=90.32 Aligned_cols=81 Identities=22% Similarity=0.309 Sum_probs=64.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-HHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-GAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+.+++++|+||+|++|+++++.|+++ |++|++..|+..+ .+.+...+ ..++.++.+|++|.+++.++++
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQ--GANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAE 80 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999997 8899888776543 33433332 2457788899999998877665
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 81 ~~~id~vi~~ag~~ 94 (248)
T PRK05557 81 FGGVDILVNNAGIT 94 (248)
T ss_pred cCCCCEEEECCCcC
Confidence 589999999854
No 225
>PRK06953 short chain dehydrogenase; Provisional
Probab=98.85 E-value=1.7e-08 Score=93.71 Aligned_cols=76 Identities=17% Similarity=0.233 Sum_probs=64.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-----CccEEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-----DVDLVV 113 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-----~~DvVi 113 (429)
|++++|+||+|++|+++++.|+++ |++|++++|+.++.+++.. ..++++++|++|.++++++++ ++|+||
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~--G~~v~~~~r~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi 75 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRAD--GWRVIATARDAAALAALQA---LGAEALALDVADPASVAGLAWKLDGEALDAAV 75 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhC--CCEEEEEECCHHHHHHHHh---ccceEEEecCCCHHHHHHHHHHhcCCCCCEEE
Confidence 478999999999999999999986 8999999999887776653 246789999999998887642 489999
Q ss_pred ecCCCC
Q 014177 114 HAAGPF 119 (429)
Q Consensus 114 ~~agp~ 119 (429)
|++|..
T Consensus 76 ~~ag~~ 81 (222)
T PRK06953 76 YVAGVY 81 (222)
T ss_pred ECCCcc
Confidence 999875
No 226
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=98.84 E-value=4.2e-08 Score=93.34 Aligned_cols=82 Identities=18% Similarity=0.335 Sum_probs=64.8
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-hhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-EKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
.+++++++|+||+|.||+++++.|+++ |+.+++.+|+. +..+.+.+.+ +.++.++.+|++|.+++.++++
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~--G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~ 81 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKE--KAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVK 81 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence 367899999999999999999999997 78888888854 3444444333 2356788999999998877664
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|++||++|..
T Consensus 82 ~~g~id~lv~~ag~~ 96 (261)
T PRK08936 82 EFGTLDVMINNAGIE 96 (261)
T ss_pred HcCCCCEEEECCCCC
Confidence 589999999854
No 227
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=98.84 E-value=2e-08 Score=94.83 Aligned_cols=78 Identities=22% Similarity=0.351 Sum_probs=64.8
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
|+++|+||+|+||+++++.|++. |++|++.+|+.+.++.+.+.+ +.++.++.+|++|.+++.++++ .+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKD--GFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 57999999999999999999987 789999999987766655443 2357889999999998877654 57
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|+|||++|..
T Consensus 79 d~vi~~ag~~ 88 (254)
T TIGR02415 79 DVMVNNAGVA 88 (254)
T ss_pred CEEEECCCcC
Confidence 9999999864
No 228
>PRK06940 short chain dehydrogenase; Provisional
Probab=98.84 E-value=1.9e-07 Score=89.73 Aligned_cols=78 Identities=24% Similarity=0.290 Sum_probs=63.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------C
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------D 108 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------~ 108 (429)
++|.++|+|+ |+||+++++.|. + |++|++.+|+.++++.+.+++. .++.++++|++|.+++.++++ +
T Consensus 1 ~~k~~lItGa-~gIG~~la~~l~-~--G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~ 76 (275)
T PRK06940 1 MKEVVVVIGA-GGIGQAIARRVG-A--GKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGP 76 (275)
T ss_pred CCCEEEEECC-ChHHHHHHHHHh-C--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCC
Confidence 3567899997 689999999995 4 7899999999887776655543 357789999999998887764 5
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+||||||..
T Consensus 77 id~li~nAG~~ 87 (275)
T PRK06940 77 VTGLVHTAGVS 87 (275)
T ss_pred CCEEEECCCcC
Confidence 89999999864
No 229
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=98.84 E-value=3.6e-08 Score=96.74 Aligned_cols=80 Identities=18% Similarity=0.293 Sum_probs=67.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCC-ceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPD-LQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g-~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
++++++|+||++.||.++++.|+++ | ++|++.+|+.++++++.+++. .++.++.+|++|.++++++++
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~--G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 79 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAAT--GEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESG 79 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 4679999999999999999999997 7 899999999988877766653 346788999999988877653
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 80 ~~iD~lI~nAG~~ 92 (314)
T TIGR01289 80 RPLDALVCNAAVY 92 (314)
T ss_pred CCCCEEEECCCcc
Confidence 589999999853
No 230
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.84 E-value=2.7e-08 Score=94.69 Aligned_cols=81 Identities=12% Similarity=0.144 Sum_probs=65.4
Q ss_pred CCCCeEEEEcCC--hHHHHHHHHHHhHcCCCceEEEEecC---chhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhc---
Q 014177 37 NRNARVLVLGGT--GRVGGSTAVALSKLCPDLQIVVGSRN---REKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~--G~iG~~l~~~L~~~~~g~~v~v~~R~---~~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
+.+|.++|+||+ +.||+++++.|+++ |++|++.+|+ .++++++.+++. .++..+++|++|.++++++++
T Consensus 5 ~~~k~~lItGa~~s~GIG~aia~~la~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 82 (257)
T PRK08594 5 LEGKTYVVMGVANKRSIAWGIARSLHNA--GAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIK 82 (257)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHH
Confidence 567899999987 68999999999997 8899998765 345666666553 457789999999998877664
Q ss_pred ----CccEEEecCCCC
Q 014177 108 ----DVDLVVHAAGPF 119 (429)
Q Consensus 108 ----~~DvVi~~agp~ 119 (429)
++|++|||+|..
T Consensus 83 ~~~g~ld~lv~nag~~ 98 (257)
T PRK08594 83 EEVGVIHGVAHCIAFA 98 (257)
T ss_pred HhCCCccEEEECcccC
Confidence 589999999854
No 231
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=98.83 E-value=2.5e-08 Score=93.82 Aligned_cols=81 Identities=25% Similarity=0.299 Sum_probs=61.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
|.+|.++|+||+|++|+++++.|+++ |++|++. +++..+.+...+++ +.++..+.+|+.|.+++.++++
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKD--GFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAE 78 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHc--CCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 34688999999999999999999997 7888774 44444444333332 2356678999999988877664
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|+||||+|..
T Consensus 79 ~~~id~li~~ag~~ 92 (246)
T PRK12938 79 VGEIDVLVNNAGIT 92 (246)
T ss_pred hCCCCEEEECCCCC
Confidence 689999999864
No 232
>PRK07069 short chain dehydrogenase; Validated
Probab=98.83 E-value=3.6e-08 Score=92.85 Aligned_cols=78 Identities=17% Similarity=0.233 Sum_probs=62.6
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC-chhHHHHHHHhCC-----CcEEEEeeCCChHHHHHHhc-------
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN-REKGAAMVSTLGK-----NSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~-~~~~~~l~~~l~~-----~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
+++|+||+|++|+++++.|+++ |++|++.+|+ .++++.+.+.+.. .+..+++|++|.+++.++++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 78 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQ--GAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMG 78 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 4899999999999999999997 8999999998 6666666655421 23457899999998877664
Q ss_pred CccEEEecCCCCC
Q 014177 108 DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ~~DvVi~~agp~~ 120 (429)
++|+|||++|...
T Consensus 79 ~id~vi~~ag~~~ 91 (251)
T PRK07069 79 GLSVLVNNAGVGS 91 (251)
T ss_pred CccEEEECCCcCC
Confidence 5799999998643
No 233
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.83 E-value=1.5e-08 Score=95.04 Aligned_cols=82 Identities=20% Similarity=0.315 Sum_probs=68.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
.+++++++|+||+|++|+.+++.|+++ ++++++. +|+.++.+.+.+.+. .++.++.+|++|.+++.++++
T Consensus 2 ~~~~~~ilI~Gasg~iG~~la~~l~~~--g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (247)
T PRK05565 2 KLMGKVAIVTGASGGIGRAIAELLAKE--GAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVE 79 (247)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 467889999999999999999999987 8899998 998887766555432 357889999999998877765
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 80 ~~~~id~vi~~ag~~ 94 (247)
T PRK05565 80 KFGKIDILVNNAGIS 94 (247)
T ss_pred HhCCCCEEEECCCcC
Confidence 789999999865
No 234
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.83 E-value=3.8e-08 Score=94.48 Aligned_cols=80 Identities=19% Similarity=0.268 Sum_probs=62.4
Q ss_pred CCCCeEEEEcCCh--HHHHHHHHHHhHcCCCceEEEEecCchhH---HHHHHHhCCCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGTG--RVGGSTAVALSKLCPDLQIVVGSRNREKG---AAMVSTLGKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G--~iG~~l~~~L~~~~~g~~v~v~~R~~~~~---~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
|++|.++||||++ .||+++++.|++. |++|++.+|+.... +++.+.++ ....+++|++|.++++++++
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~--Ga~V~~~~r~~~~~~~~~~~~~~~g-~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQ--GAELAFTYQGEALGKRVKPLAESLG-SDFVLPCDVEDIASVDAVFEALEK 81 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhC--CCEEEEecCchHHHHHHHHHHHhcC-CceEEeCCCCCHHHHHHHHHHHHH
Confidence 5678999999985 7999999999997 89999999875433 33333332 23468899999998877764
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|++|||||..
T Consensus 82 ~~g~iD~lVnnAG~~ 96 (271)
T PRK06505 82 KWGKLDFVVHAIGFS 96 (271)
T ss_pred HhCCCCEEEECCccC
Confidence 689999999854
No 235
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=98.83 E-value=7e-08 Score=91.88 Aligned_cols=153 Identities=14% Similarity=0.087 Sum_probs=90.5
Q ss_pred CCCCeEEEEcCC--hHHHHHHHHHHhHcCCCceEEEEecCch------hHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-
Q 014177 37 NRNARVLVLGGT--GRVGGSTAVALSKLCPDLQIVVGSRNRE------KGAAMVSTLGKNSEFAEVNIYNEGSLLMALR- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~--G~iG~~l~~~L~~~~~g~~v~v~~R~~~------~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~- 107 (429)
+++|.++|+||+ +.||+++++.|++. |++|++.+|+.+ .++++.+.. ..+.++++|++|.++++++++
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~~ 80 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAA--GAELGITYLPDEKGRFEKKVRELTEPL-NPSLFLPCDVQDDAQIEETFET 80 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHC--CCEEEEEecCcccchHHHHHHHHHhcc-CcceEeecCcCCHHHHHHHHHH
Confidence 567899999986 67999999999997 889988765432 233333222 246688999999998887765
Q ss_pred ------CccEEEecCCCCCCCc-hHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecC--------C-C
Q 014177 108 ------DVDLVVHAAGPFQQAP-KCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTG--------G-I 171 (429)
Q Consensus 108 ------~~DvVi~~agp~~~~~-~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~--------g-~ 171 (429)
++|++|||+|...... ..++.+.-.+.-.+.++++-...+.-. +.+....++.|..+.+++ + .
T Consensus 81 ~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~-~~~~~~m~~~g~Iv~isS~~~~~~~~~~~ 159 (258)
T PRK07370 81 IKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLC-KAAKPLMSEGGSIVTLTYLGGVRAIPNYN 159 (258)
T ss_pred HHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHH-HHHHHHHhhCCeEEEEeccccccCCcccc
Confidence 5899999998542100 011221111111122333322222211 111122223454333332 1 2
Q ss_pred ccchhHHHHHHHHHHHHhhcCC
Q 014177 172 YPGVSNVMAAELVRVARNESKG 193 (429)
Q Consensus 172 ~pG~s~~~a~~~~~~~~~~~~~ 193 (429)
.|+.||.....+++.+..++..
T Consensus 160 ~Y~asKaal~~l~~~la~el~~ 181 (258)
T PRK07370 160 VMGVAKAALEASVRYLAAELGP 181 (258)
T ss_pred hhhHHHHHHHHHHHHHHHHhCc
Confidence 2788999999998888776654
No 236
>PRK08309 short chain dehydrogenase; Provisional
Probab=98.83 E-value=4.4e-08 Score=87.80 Aligned_cols=100 Identities=18% Similarity=0.196 Sum_probs=79.6
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhc-------Ccc
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALR-------DVD 110 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~-------~~D 110 (429)
|+++|+||+|++|. +++.|.++ |++|++.+|+.++++.+...++ .++..+.+|++|.+++.++++ ++|
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~--G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id 77 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEK--GFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFD 77 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHC--cCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCe
Confidence 47999999998776 99999997 8999999999888777665443 357788899999998888765 578
Q ss_pred EEEecCCCCCCCchHHHHHHHHHcCCc-----EEEeCCCh
Q 014177 111 LVVHAAGPFQQAPKCTVLEAAIETKTA-----YIDVCDDT 145 (429)
Q Consensus 111 vVi~~agp~~~~~~~~v~~aa~~~gv~-----~vdis~~~ 145 (429)
++|+.+-.. +..++.++|.+.|++ ++.+-++.
T Consensus 78 ~lv~~vh~~---~~~~~~~~~~~~gv~~~~~~~~h~~gs~ 114 (177)
T PRK08309 78 LAVAWIHSS---AKDALSVVCRELDGSSETYRLFHVLGSA 114 (177)
T ss_pred EEEEecccc---chhhHHHHHHHHccCCCCceEEEEeCCc
Confidence 999887433 337899999999988 67666554
No 237
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.83 E-value=4.6e-08 Score=93.45 Aligned_cols=80 Identities=16% Similarity=0.195 Sum_probs=61.8
Q ss_pred CCCCeEEEEcCCh--HHHHHHHHHHhHcCCCceEEEEecCc---hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGTG--RVGGSTAVALSKLCPDLQIVVGSRNR---EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G--~iG~~l~~~L~~~~~g~~v~v~~R~~---~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+++|+++||||++ .||+++++.|++. |++|++.+|+. +.++.+.... +....+++|++|.++++++++
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~--G~~vil~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~ 80 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAAQL-GSDIVLPCDVAEDASIDAMFAELGK 80 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHC--CCEEEEEecchhHHHHHHHHHhcc-CCceEeecCCCCHHHHHHHHHHHHh
Confidence 5678999999984 7999999999997 88999998873 2223332222 345678899999998888764
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|++|||||..
T Consensus 81 ~~g~iD~linnAg~~ 95 (262)
T PRK07984 81 VWPKFDGFVHSIGFA 95 (262)
T ss_pred hcCCCCEEEECCccC
Confidence 589999999854
No 238
>PRK06484 short chain dehydrogenase; Validated
Probab=98.82 E-value=2.5e-08 Score=104.62 Aligned_cols=80 Identities=24% Similarity=0.430 Sum_probs=70.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
.++++++||||++.||.++++.|+++ |++|++.+|+.++++++.++++.++..+++|++|.++++++++ ++
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARA--GDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRI 80 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 46789999999999999999999997 8999999999998888877776667889999999998877764 58
Q ss_pred cEEEecCCC
Q 014177 110 DLVVHAAGP 118 (429)
Q Consensus 110 DvVi~~agp 118 (429)
|++||++|.
T Consensus 81 D~li~nag~ 89 (520)
T PRK06484 81 DVLVNNAGV 89 (520)
T ss_pred CEEEECCCc
Confidence 999999985
No 239
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.82 E-value=1.4e-07 Score=88.90 Aligned_cols=81 Identities=17% Similarity=0.260 Sum_probs=67.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++++|+||+|++|+.+++.|+++ |+.|++++|+.++++...+++ +.++.++++|++|.++++++++
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~--G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQK--GAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDF 80 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999997 789999999988776665543 3457789999999888776554
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 81 ~~id~vi~~ag~~ 93 (253)
T PRK08217 81 GQLNGLINNAGIL 93 (253)
T ss_pred CCCCEEEECCCcc
Confidence 479999999853
No 240
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.82 E-value=7.3e-08 Score=91.64 Aligned_cols=81 Identities=21% Similarity=0.221 Sum_probs=66.6
Q ss_pred CCCCeEEEEcC--ChHHHHHHHHHHhHcCCCceEEEEecCc--hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGG--TGRVGGSTAVALSKLCPDLQIVVGSRNR--EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga--~G~iG~~l~~~L~~~~~g~~v~v~~R~~--~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+.+++++|||| ++.||.++++.|+++ |++|++.+|+. +.++++.++++.++.++++|++|.++++++++
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~ 82 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQ--GAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREH 82 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHC--CCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHH
Confidence 56789999998 788999999999997 89999998764 44566666555567789999999998877654
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 83 ~g~iD~li~nAG~~ 96 (256)
T PRK07889 83 VDGLDGVVHSIGFA 96 (256)
T ss_pred cCCCcEEEEccccc
Confidence 689999999854
No 241
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.82 E-value=1.3e-07 Score=89.37 Aligned_cols=99 Identities=17% Similarity=0.248 Sum_probs=78.0
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhc----
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+.+..++.||||||++.+|+.++.+++++ +..+++.|.|.+...+..+... +++....+|++|.+++.+..+
T Consensus 33 ~k~v~g~~vLITGgg~GlGr~ialefa~r--g~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~ 110 (300)
T KOG1201|consen 33 LKSVSGEIVLITGGGSGLGRLIALEFAKR--GAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKK 110 (300)
T ss_pred hhhccCCEEEEeCCCchHHHHHHHHHHHh--CCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHH
Confidence 44577899999999999999999999998 7899999999887777666554 368899999999998776654
Q ss_pred ---CccEEEecCCCCCCC----chHHHHHHHHHc
Q 014177 108 ---DVDLVVHAAGPFQQA----PKCTVLEAAIET 134 (429)
Q Consensus 108 ---~~DvVi~~agp~~~~----~~~~v~~aa~~~ 134 (429)
++|++||+||..... -..+.++.+.+.
T Consensus 111 e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~v 144 (300)
T KOG1201|consen 111 EVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDV 144 (300)
T ss_pred hcCCceEEEeccccccCCCccCCCHHHHHHHHHH
Confidence 689999999865431 124556666544
No 242
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=98.82 E-value=2.4e-08 Score=100.72 Aligned_cols=82 Identities=18% Similarity=0.199 Sum_probs=68.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++++|+++|+||+|++|+++++.|.++ |++|++.+|+.++++.........+..+.+|++|.+++.+.++++|++||+
T Consensus 175 sl~gK~VLITGASgGIG~aLA~~La~~--G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInn 252 (406)
T PRK07424 175 SLKGKTVAVTGASGTLGQALLKELHQQ--GAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIIN 252 (406)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEEC
Confidence 467899999999999999999999987 889999999887665433222234667899999999999999999999999
Q ss_pred CCCC
Q 014177 116 AGPF 119 (429)
Q Consensus 116 agp~ 119 (429)
||..
T Consensus 253 AGi~ 256 (406)
T PRK07424 253 HGIN 256 (406)
T ss_pred CCcC
Confidence 9854
No 243
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.80 E-value=4e-08 Score=93.52 Aligned_cols=81 Identities=19% Similarity=0.230 Sum_probs=64.4
Q ss_pred CCCCCeEEEEcCC--hHHHHHHHHHHhHcCCCceEEEEecCchh---HHHHHHHhCCCcEEEEeeCCChHHHHHHhc---
Q 014177 36 KNRNARVLVLGGT--GRVGGSTAVALSKLCPDLQIVVGSRNREK---GAAMVSTLGKNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~--G~iG~~l~~~L~~~~~g~~v~v~~R~~~~---~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
++++|.++||||+ +.||+++++.|+++ |++|++.+|+.+. ++++.++++ ....+++|++|.++++++++
T Consensus 7 ~~~~k~~lItGas~g~GIG~a~a~~la~~--G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~ 83 (258)
T PRK07533 7 PLAGKRGLVVGIANEQSIAWGCARAFRAL--GAELAVTYLNDKARPYVEPLAEELD-APIFLPLDVREPGQLEAVFARIA 83 (258)
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHHHHhhc-cceEEecCcCCHHHHHHHHHHHH
Confidence 4678999999998 47999999999997 8899999998643 344444443 35678999999998887654
Q ss_pred ----CccEEEecCCCC
Q 014177 108 ----DVDLVVHAAGPF 119 (429)
Q Consensus 108 ----~~DvVi~~agp~ 119 (429)
++|++|||||..
T Consensus 84 ~~~g~ld~lv~nAg~~ 99 (258)
T PRK07533 84 EEWGRLDFLLHSIAFA 99 (258)
T ss_pred HHcCCCCEEEEcCccC
Confidence 589999999854
No 244
>PRK08017 oxidoreductase; Provisional
Probab=98.80 E-value=4.2e-08 Score=92.78 Aligned_cols=76 Identities=18% Similarity=0.162 Sum_probs=62.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--------Ccc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--------DVD 110 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--------~~D 110 (429)
+++++|+||+|+||+++++.|+++ |++|++.+|+.++++.+.+ .++..+++|+.|.+++.++++ ++|
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~ 76 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRR--GYRVLAACRKPDDVARMNS---LGFTGILLDLDDPESVERAADEVIALTDNRLY 76 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHhHHHHh---CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence 368999999999999999999987 7899999999888766543 247889999999887766543 468
Q ss_pred EEEecCCCC
Q 014177 111 LVVHAAGPF 119 (429)
Q Consensus 111 vVi~~agp~ 119 (429)
.+||++|..
T Consensus 77 ~ii~~ag~~ 85 (256)
T PRK08017 77 GLFNNAGFG 85 (256)
T ss_pred EEEECCCCC
Confidence 999999853
No 245
>PRK12743 oxidoreductase; Provisional
Probab=98.80 E-value=2.9e-08 Score=94.18 Aligned_cols=81 Identities=17% Similarity=0.284 Sum_probs=64.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec-CchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR-NREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R-~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
++++++|+||+|+||+++++.|+++ |++|++.++ +.+.++.+.+.+ +.++.++++|++|.++++++++
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQ--GFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL 78 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3578999999999999999999997 889988764 555555544433 3468899999999988777664
Q ss_pred -CccEEEecCCCCC
Q 014177 108 -DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 -~~DvVi~~agp~~ 120 (429)
.+|+|||++|...
T Consensus 79 ~~id~li~~ag~~~ 92 (256)
T PRK12743 79 GRIDVLVNNAGAMT 92 (256)
T ss_pred CCCCEEEECCCCCC
Confidence 5899999998643
No 246
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=98.79 E-value=8.7e-08 Score=91.76 Aligned_cols=153 Identities=18% Similarity=0.195 Sum_probs=97.6
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC------CCcEEEEeeCCChHHHHHHh---
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG------KNSEFAEVNIYNEGSLLMAL--- 106 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~------~~v~~~~~Dl~d~~~l~~~~--- 106 (429)
.+.+|.++|||++..||+++|+.|++. |.+|++.+|+.++++.....+. .++..+.+|+++.+..++++
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~~--Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~ 82 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAKA--GAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA 82 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence 378899999999999999999999997 8999999999998877766543 34778999999876655544
Q ss_pred -----cCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHH--cCCcEEecC----------
Q 014177 107 -----RDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIA--ANIPAITTG---------- 169 (429)
Q Consensus 107 -----~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~--~g~~~i~~~---------- 169 (429)
.+.|++||+||.....+ .+++.-.+.--+.++++-...++..........++ .|+.+++.+
T Consensus 83 ~~~~~GkidiLvnnag~~~~~~--~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~ 160 (270)
T KOG0725|consen 83 VEKFFGKIDILVNNAGALGLTG--SILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGS 160 (270)
T ss_pred HHHhCCCCCEEEEcCCcCCCCC--ChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCC
Confidence 36999999998655321 22322222211222222221122222222222222 333333221
Q ss_pred CCccchhHHHHHHHHHHHHhhcC
Q 014177 170 GIYPGVSNVMAAELVRVARNESK 192 (429)
Q Consensus 170 g~~pG~s~~~a~~~~~~~~~~~~ 192 (429)
+..|+.+|.....+.+.+..++.
T Consensus 161 ~~~Y~~sK~al~~ltr~lA~El~ 183 (270)
T KOG0725|consen 161 GVAYGVSKAALLQLTRSLAKELA 183 (270)
T ss_pred cccchhHHHHHHHHHHHHHHHHh
Confidence 13578899888888887665543
No 247
>PLN02780 ketoreductase/ oxidoreductase
Probab=98.79 E-value=4.3e-08 Score=96.47 Aligned_cols=80 Identities=20% Similarity=0.302 Sum_probs=62.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCC--hHHHH---HHhc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYN--EGSLL---MALR 107 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d--~~~l~---~~~~ 107 (429)
.++.++||||+|+||+++++.|+++ |++|++++|+.++++++.+++. .++..+.+|+++ .+.++ +.+.
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~--G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~ 129 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARK--GLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIE 129 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhc
Confidence 3689999999999999999999997 8899999999999888776542 246678899985 23333 3334
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 130 ~~didilVnnAG~~ 143 (320)
T PLN02780 130 GLDVGVLINNVGVS 143 (320)
T ss_pred CCCccEEEEecCcC
Confidence 356999999864
No 248
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.78 E-value=4.6e-08 Score=93.93 Aligned_cols=80 Identities=20% Similarity=0.246 Sum_probs=63.9
Q ss_pred CCCCeEEEEcCC--hHHHHHHHHHHhHcCCCceEEEEecCc---hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGT--GRVGGSTAVALSKLCPDLQIVVGSRNR---EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~--G~iG~~l~~~L~~~~~g~~v~v~~R~~---~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
|++|+++|+||+ +.||.++++.|+++ |++|++.+|+. ++++++.++++ ....+++|++|.++++++++
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~--G~~V~l~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~ 84 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAA--GAELAFTYQGDALKKRVEPLAAELG-AFVAGHCDVTDEASIDAVFETLEK 84 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCchHHHHHHHHHHHhcC-CceEEecCCCCHHHHHHHHHHHHH
Confidence 677899999996 67999999999997 89999888863 34455555443 35578999999998887764
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 85 ~~g~iD~lv~nAG~~ 99 (272)
T PRK08159 85 KWGKLDFVVHAIGFS 99 (272)
T ss_pred hcCCCcEEEECCccc
Confidence 589999999854
No 249
>PRK07577 short chain dehydrogenase; Provisional
Probab=98.78 E-value=3.9e-08 Score=91.68 Aligned_cols=73 Identities=22% Similarity=0.269 Sum_probs=60.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc------CccE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR------DVDL 111 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~------~~Dv 111 (429)
.+++++|+||+|++|+++++.|+++ |++|++.+|+.++. . ..+++++|++|.+++.++++ ++|+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~--G~~v~~~~r~~~~~------~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~ 71 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANL--GHQVIGIARSAIDD------F--PGELFACDLADIEQTAATLAQINEIHPVDA 71 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEEeCCcccc------c--CceEEEeeCCCHHHHHHHHHHHHHhCCCcE
Confidence 4578999999999999999999997 89999999987641 1 23678999999998877765 6899
Q ss_pred EEecCCCCC
Q 014177 112 VVHAAGPFQ 120 (429)
Q Consensus 112 Vi~~agp~~ 120 (429)
||||+|...
T Consensus 72 vi~~ag~~~ 80 (234)
T PRK07577 72 IVNNVGIAL 80 (234)
T ss_pred EEECCCCCC
Confidence 999998643
No 250
>PRK12367 short chain dehydrogenase; Provisional
Probab=98.78 E-value=2.5e-08 Score=94.29 Aligned_cols=82 Identities=16% Similarity=0.187 Sum_probs=65.2
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
++++++++++|+||+|++|+++++.|+++ |++|++.+|+....... ........+++|++|.+++.+.+.++|++|
T Consensus 9 ~~~l~~k~~lITGas~gIG~ala~~l~~~--G~~Vi~~~r~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~iDilV 84 (245)
T PRK12367 9 QSTWQGKRIGITGASGALGKALTKAFRAK--GAKVIGLTHSKINNSES--NDESPNEWIKWECGKEESLDKQLASLDVLI 84 (245)
T ss_pred HHhhCCCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEECCchhhhhh--hccCCCeEEEeeCCCHHHHHHhcCCCCEEE
Confidence 34577899999999999999999999997 89999999986321111 111223578899999999999888999999
Q ss_pred ecCCCC
Q 014177 114 HAAGPF 119 (429)
Q Consensus 114 ~~agp~ 119 (429)
||||..
T Consensus 85 nnAG~~ 90 (245)
T PRK12367 85 LNHGIN 90 (245)
T ss_pred ECCccC
Confidence 999853
No 251
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.76 E-value=1.2e-07 Score=90.32 Aligned_cols=80 Identities=14% Similarity=0.160 Sum_probs=61.8
Q ss_pred CCCCeEEEEcC--ChHHHHHHHHHHhHcCCCceEEEEecCc---hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGG--TGRVGGSTAVALSKLCPDLQIVVGSRNR---EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga--~G~iG~~l~~~L~~~~~g~~v~v~~R~~---~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
++++.++|||| ++.||+++++.|+++ |++|++.+|+. +.++++....+ ....+++|++|.++++++++
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQ--GAELAFTYVVDKLEERVRKMAAELD-SELVFRCDVASDDEINQVFADLGK 80 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCcHHHHHHHHHHHhccC-CceEEECCCCCHHHHHHHHHHHHH
Confidence 66789999996 568999999999997 88999887653 23333433332 34578999999998887764
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|++|||||..
T Consensus 81 ~~g~iD~lVnnAG~~ 95 (261)
T PRK08690 81 HWDGLDGLVHSIGFA 95 (261)
T ss_pred HhCCCcEEEECCccC
Confidence 689999999865
No 252
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.76 E-value=5.4e-08 Score=105.01 Aligned_cols=82 Identities=20% Similarity=0.323 Sum_probs=70.6
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
.+++++++|+||+|++|+++++.|+++ |++|++.+|+.++++++.+.+ +.++.++++|++|.+++.++++
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 445 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEA--GATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAE 445 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence 467889999999999999999999997 889999999998887776554 2467889999999998888766
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|++|||||..
T Consensus 446 ~g~id~li~~Ag~~ 459 (657)
T PRK07201 446 HGHVDYLVNNAGRS 459 (657)
T ss_pred cCCCCEEEECCCCC
Confidence 689999999853
No 253
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.76 E-value=4.9e-08 Score=92.69 Aligned_cols=81 Identities=15% Similarity=0.176 Sum_probs=61.5
Q ss_pred CCCCeEEEEcCCh--HHHHHHHHHHhHcCCCceEEEEecC-----------chhHHHHHHHh---CCCcEEEEeeCCChH
Q 014177 37 NRNARVLVLGGTG--RVGGSTAVALSKLCPDLQIVVGSRN-----------REKGAAMVSTL---GKNSEFAEVNIYNEG 100 (429)
Q Consensus 37 ~~~~~VlV~Ga~G--~iG~~l~~~L~~~~~g~~v~v~~R~-----------~~~~~~l~~~l---~~~v~~~~~Dl~d~~ 100 (429)
+++++++|+||+| .||+++++.|+++ |++|++.+|+ .+...++.+++ +.++.++++|++|.+
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~--G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~ 81 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEA--GADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQND 81 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHC--CCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence 6679999999984 7999999999997 7888887542 12222333332 345778899999999
Q ss_pred HHHHHhc-------CccEEEecCCCC
Q 014177 101 SLLMALR-------DVDLVVHAAGPF 119 (429)
Q Consensus 101 ~l~~~~~-------~~DvVi~~agp~ 119 (429)
++.++++ ++|+|||++|..
T Consensus 82 ~i~~~~~~~~~~~g~id~li~~ag~~ 107 (256)
T PRK12859 82 APKELLNKVTEQLGYPHILVNNAAYS 107 (256)
T ss_pred HHHHHHHHHHHHcCCCcEEEECCCCC
Confidence 8887765 479999999854
No 254
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=98.75 E-value=5.4e-08 Score=92.74 Aligned_cols=76 Identities=17% Similarity=0.250 Sum_probs=64.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++++++|+||+|+||+++++.|+++ |++|++.+|+..+.+. .++.++++|++|.++++++++ .
T Consensus 6 ~l~~k~vlItG~s~gIG~~la~~l~~~--G~~v~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 77 (266)
T PRK06171 6 NLQGKIIIVTGGSSGIGLAIVKELLAN--GANVVNADIHGGDGQH------ENYQFVPTDVSSAEEVNHTVAEIIEKFGR 77 (266)
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCcccccc------CceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 467799999999999999999999997 8999999998765421 357789999999998877665 5
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+||||||..
T Consensus 78 id~li~~Ag~~ 88 (266)
T PRK06171 78 IDGLVNNAGIN 88 (266)
T ss_pred CCEEEECCccc
Confidence 79999999853
No 255
>PRK07832 short chain dehydrogenase; Provisional
Probab=98.74 E-value=7.4e-08 Score=92.28 Aligned_cols=78 Identities=21% Similarity=0.287 Sum_probs=63.3
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---C-CcEEEEeeCCChHHHHHHhc-------C
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---K-NSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~-~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
|+++|+||+|++|+++++.|+++ |++|++.+|+.++++...+++. . ...++++|++|.+++.++++ +
T Consensus 1 k~vlItGas~giG~~la~~la~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQ--GAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGS 78 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 47999999999999999999987 7899999999887776655432 2 24557899999988776654 4
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+|||++|..
T Consensus 79 id~lv~~ag~~ 89 (272)
T PRK07832 79 MDVVMNIAGIS 89 (272)
T ss_pred CCEEEECCCCC
Confidence 79999999864
No 256
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.73 E-value=7.1e-08 Score=91.95 Aligned_cols=80 Identities=13% Similarity=0.155 Sum_probs=61.3
Q ss_pred CCCCeEEEEcCCh--HHHHHHHHHHhHcCCCceEEEEecCch---hHHHHHHHhCCCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGTG--RVGGSTAVALSKLCPDLQIVVGSRNRE---KGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G--~iG~~l~~~L~~~~~g~~v~v~~R~~~---~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+++|.++||||++ .||+++++.|+++ |++|++.+|+.. .++++.+..+ ....+++|++|.++++++++
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~--G~~v~~~~r~~~~~~~~~~l~~~~g-~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKH--GAELWFTYQSEVLEKRVKPLAEEIG-CNFVSELDVTNPKSISNLFDDIKE 82 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHc--CCEEEEEeCchHHHHHHHHHHHhcC-CceEEEccCCCHHHHHHHHHHHHH
Confidence 6678999999986 7999999999987 889999888742 2333333332 23457899999998887764
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|++||++|..
T Consensus 83 ~~g~iDilVnnag~~ 97 (260)
T PRK06603 83 KWGSFDFLLHGMAFA 97 (260)
T ss_pred HcCCccEEEEccccC
Confidence 589999999853
No 257
>PRK06720 hypothetical protein; Provisional
Probab=98.73 E-value=8.8e-08 Score=85.25 Aligned_cols=83 Identities=24% Similarity=0.433 Sum_probs=67.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
.++++.++|+||++.+|+.+++.|.+. |++|++.+|+.+.++...+++ +.+..++++|++|.+++.++++
T Consensus 13 ~l~gk~~lVTGa~~GIG~aia~~l~~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~ 90 (169)
T PRK06720 13 KLAGKVAIVTGGGIGIGRNTALLLAKQ--GAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA 90 (169)
T ss_pred ccCCCEEEEecCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999987 789999999887766554443 3456778999999888777543
Q ss_pred --CccEEEecCCCCC
Q 014177 108 --DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 --~~DvVi~~agp~~ 120 (429)
++|++||+||...
T Consensus 91 ~G~iDilVnnAG~~~ 105 (169)
T PRK06720 91 FSRIDMLFQNAGLYK 105 (169)
T ss_pred cCCCCEEEECCCcCC
Confidence 6999999998643
No 258
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.72 E-value=7e-08 Score=91.52 Aligned_cols=82 Identities=13% Similarity=0.163 Sum_probs=62.4
Q ss_pred CCCCCeEEEEcCCh--HHHHHHHHHHhHcCCCceEEEEecC-----------chhHHHHHHH---hCCCcEEEEeeCCCh
Q 014177 36 KNRNARVLVLGGTG--RVGGSTAVALSKLCPDLQIVVGSRN-----------REKGAAMVST---LGKNSEFAEVNIYNE 99 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G--~iG~~l~~~L~~~~~g~~v~v~~R~-----------~~~~~~l~~~---l~~~v~~~~~Dl~d~ 99 (429)
++++++++|+||+| .+|+++++.|+++ |++|++.+|+ ......+.+. .+.++.++.+|++|.
T Consensus 2 ~l~~k~vlItGas~~~giG~~la~~l~~~--G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 79 (256)
T PRK12748 2 PLMKKIALVTGASRLNGIGAAVCRRLAAK--GIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQP 79 (256)
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHHHc--CCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCH
Confidence 35678999999985 6999999999997 7899999987 1111112222 234688999999999
Q ss_pred HHHHHHhc-------CccEEEecCCCC
Q 014177 100 GSLLMALR-------DVDLVVHAAGPF 119 (429)
Q Consensus 100 ~~l~~~~~-------~~DvVi~~agp~ 119 (429)
+++.++++ ++|+|||++|..
T Consensus 80 ~~~~~~~~~~~~~~g~id~vi~~ag~~ 106 (256)
T PRK12748 80 YAPNRVFYAVSERLGDPSILINNAAYS 106 (256)
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCCcC
Confidence 88776654 579999999864
No 259
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.72 E-value=5.1e-08 Score=91.06 Aligned_cols=76 Identities=20% Similarity=0.292 Sum_probs=61.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCCh-HHHHHHhcCccEEEe
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNE-GSLLMALRDVDLVVH 114 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~-~~l~~~~~~~DvVi~ 114 (429)
++++++++|+||+|+||+++++.|+++ |++|++.+|+.... ...++..+.+|++|. +.+.+.+.++|+|||
T Consensus 2 ~l~~k~~lVtGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~ 73 (235)
T PRK06550 2 EFMTKTVLITGAASGIGLAQARAFLAQ--GAQVYGVDKQDKPD------LSGNFHFLQLDLSDDLEPLFDWVPSVDILCN 73 (235)
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHHHC--CCEEEEEeCCcccc------cCCcEEEEECChHHHHHHHHHhhCCCCEEEE
Confidence 367789999999999999999999987 88999999976432 124578899999987 545555568999999
Q ss_pred cCCCC
Q 014177 115 AAGPF 119 (429)
Q Consensus 115 ~agp~ 119 (429)
++|..
T Consensus 74 ~ag~~ 78 (235)
T PRK06550 74 TAGIL 78 (235)
T ss_pred CCCCC
Confidence 99853
No 260
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=98.70 E-value=9.5e-08 Score=83.75 Aligned_cols=94 Identities=20% Similarity=0.217 Sum_probs=75.3
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+|.|+||+|.+|+.+++...++ |++|++..||+.|...+ ..+.+++.|+.|.+++.+.+.+.|+||++-+..
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~R--GHeVTAivRn~~K~~~~-----~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~ 73 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKR--GHEVTAIVRNASKLAAR-----QGVTILQKDIFDLTSLASDLAGHDAVISAFGAG 73 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhC--CCeeEEEEeChHhcccc-----ccceeecccccChhhhHhhhcCCceEEEeccCC
Confidence 68999999999999999999998 89999999999987654 246789999999999999999999999998765
Q ss_pred CCCc-------hHHHHHHHHHcCCcEEE
Q 014177 120 QQAP-------KCTVLEAAIETKTAYID 140 (429)
Q Consensus 120 ~~~~-------~~~v~~aa~~~gv~~vd 140 (429)
.... ...+++....+++.++-
T Consensus 74 ~~~~~~~~~k~~~~li~~l~~agv~Rll 101 (211)
T COG2910 74 ASDNDELHSKSIEALIEALKGAGVPRLL 101 (211)
T ss_pred CCChhHHHHHHHHHHHHHHhhcCCeeEE
Confidence 3211 11245555555766543
No 261
>PRK07041 short chain dehydrogenase; Provisional
Probab=98.70 E-value=3e-07 Score=85.56 Aligned_cols=75 Identities=28% Similarity=0.367 Sum_probs=64.3
Q ss_pred EEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh--CCCcEEEEeeCCChHHHHHHhc---CccEEEecCC
Q 014177 43 LVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL--GKNSEFAEVNIYNEGSLLMALR---DVDLVVHAAG 117 (429)
Q Consensus 43 lV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l--~~~v~~~~~Dl~d~~~l~~~~~---~~DvVi~~ag 117 (429)
+|+||+|++|+++++.|+++ |++|++.+|+.++++.+...+ ..++.++.+|++|.+++.++++ ++|++||++|
T Consensus 1 lItGas~~iG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag 78 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAE--GARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAA 78 (230)
T ss_pred CeecCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 59999999999999999997 899999999988777766554 2457889999999999988876 4799999998
Q ss_pred CC
Q 014177 118 PF 119 (429)
Q Consensus 118 p~ 119 (429)
..
T Consensus 79 ~~ 80 (230)
T PRK07041 79 DT 80 (230)
T ss_pred CC
Confidence 54
No 262
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=98.68 E-value=8.5e-08 Score=89.59 Aligned_cols=76 Identities=17% Similarity=0.401 Sum_probs=58.7
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHh---cCccEEEecC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMAL---RDVDLVVHAA 116 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~---~~~DvVi~~a 116 (429)
|+|+|+||+|+||+++++.|++++.++.+++..|+.... . ...++.++++|++|.++++++. +++|+||||+
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~---~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~a 75 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--F---QHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCV 75 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--c---ccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECC
Confidence 589999999999999999999975556776666654321 1 1246788999999998876654 4789999999
Q ss_pred CCCC
Q 014177 117 GPFQ 120 (429)
Q Consensus 117 gp~~ 120 (429)
|...
T Consensus 76 G~~~ 79 (235)
T PRK09009 76 GMLH 79 (235)
T ss_pred cccc
Confidence 8653
No 263
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.68 E-value=7.5e-08 Score=86.18 Aligned_cols=139 Identities=14% Similarity=0.139 Sum_probs=92.6
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--------C
Q 014177 38 RNARVLVLGG-TGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--------D 108 (429)
Q Consensus 38 ~~~~VlV~Ga-~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--------~ 108 (429)
..+.|+|+|+ .|.||.++++.+.+. |+.|+...|+.+...++..+. ++...++|+++++++.+... +
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~--G~~V~AtaR~~e~M~~L~~~~--gl~~~kLDV~~~~~V~~v~~evr~~~~Gk 81 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARN--GYLVYATARRLEPMAQLAIQF--GLKPYKLDVSKPEEVVTVSGEVRANPDGK 81 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhC--CeEEEEEccccchHhhHHHhh--CCeeEEeccCChHHHHHHHHHHhhCCCCc
Confidence 3578999985 588999999999997 899999999999988887554 47889999999998877654 5
Q ss_pred ccEEEecCCCCCCC----chHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecC---------CCccch
Q 014177 109 VDLVVHAAGPFQQA----PKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTG---------GIYPGV 175 (429)
Q Consensus 109 ~DvVi~~agp~~~~----~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~---------g~~pG~ 175 (429)
.|+++|+||..... .+...++.|.+. .+.+......... +...+++|..+..|+ +..|..
T Consensus 82 ld~L~NNAG~~C~~Pa~d~~i~ave~~f~v-----NvfG~irM~~a~~--h~likaKGtIVnvgSl~~~vpfpf~~iYsA 154 (289)
T KOG1209|consen 82 LDLLYNNAGQSCTFPALDATIAAVEQCFKV-----NVFGHIRMCRALS--HFLIKAKGTIVNVGSLAGVVPFPFGSIYSA 154 (289)
T ss_pred eEEEEcCCCCCcccccccCCHHHHHhhhcc-----ceeeeehHHHHHH--HHHHHccceEEEecceeEEeccchhhhhhH
Confidence 89999999865431 112334444332 2222222222221 445667776655543 223566
Q ss_pred hHHHHHHHHHHH
Q 014177 176 SNVMAAELVRVA 187 (429)
Q Consensus 176 s~~~a~~~~~~~ 187 (429)
||.....+++.+
T Consensus 155 sKAAihay~~tL 166 (289)
T KOG1209|consen 155 SKAAIHAYARTL 166 (289)
T ss_pred HHHHHHHhhhhc
Confidence 776655555443
No 264
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=98.68 E-value=1.2e-07 Score=88.94 Aligned_cols=79 Identities=18% Similarity=0.217 Sum_probs=62.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-------
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
+++++|+||+|++|+++++.|.++ |++|++.+|+.. ..+.+...+ +.++.++.+|+.|.+++.++++
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 79 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLND--GYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEG 79 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 468999999999999999999987 789999999853 233332222 2357889999999988877664
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 80 ~id~vi~~ag~~ 91 (245)
T PRK12824 80 PVDILVNNAGIT 91 (245)
T ss_pred CCCEEEECCCCC
Confidence 589999999753
No 265
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=98.67 E-value=1.7e-07 Score=87.72 Aligned_cols=78 Identities=24% Similarity=0.319 Sum_probs=62.1
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec-CchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR-NREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R-~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
|.++|+||+|++|+++++.|+++ |+++++..| +.++.+....+. +.++.++.+|++|.+++.++++ +
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKD--GYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 57999999999999999999987 789988887 555555443332 2467899999999988776654 5
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+|||++|..
T Consensus 79 id~vi~~ag~~ 89 (242)
T TIGR01829 79 IDVLVNNAGIT 89 (242)
T ss_pred CcEEEECCCCC
Confidence 89999999854
No 266
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.67 E-value=2e-07 Score=88.81 Aligned_cols=80 Identities=13% Similarity=0.160 Sum_probs=62.5
Q ss_pred CCCCeEEEEcC--ChHHHHHHHHHHhHcCCCceEEEEec---CchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGG--TGRVGGSTAVALSKLCPDLQIVVGSR---NREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga--~G~iG~~l~~~L~~~~~g~~v~v~~R---~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+++++++|+|| ++.||+++++.|++. |++|++.+| +.++++.+.++++ ....+++|++|.++++++++
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~ 80 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKRE--GAELAFTYVGDRFKDRITEFAAEFG-SDLVFPCDVASDEQIDALFASLGQ 80 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHC--CCeEEEEccchHHHHHHHHHHHhcC-CcceeeccCCCHHHHHHHHHHHHH
Confidence 56789999996 568999999999997 889988764 3455555555443 23468899999998887764
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|++|||||..
T Consensus 81 ~~g~iD~lvnnAG~~ 95 (260)
T PRK06997 81 HWDGLDGLVHSIGFA 95 (260)
T ss_pred HhCCCcEEEEccccC
Confidence 589999999864
No 267
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.66 E-value=5.3e-07 Score=92.91 Aligned_cols=82 Identities=22% Similarity=0.230 Sum_probs=65.5
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc--hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc----
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR--EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~--~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+..+++++++|+||+|.||+.+++.|.++ |++|++.+|+. +.++++.++++ ...+++|++|.++++++++
T Consensus 205 ~~~~~g~~vlItGasggIG~~la~~l~~~--Ga~vi~~~~~~~~~~l~~~~~~~~--~~~~~~Dv~~~~~~~~~~~~~~~ 280 (450)
T PRK08261 205 DRPLAGKVALVTGAARGIGAAIAEVLARD--GAHVVCLDVPAAGEALAAVANRVG--GTALALDITAPDAPARIAEHLAE 280 (450)
T ss_pred ccCCCCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCccHHHHHHHHHHcC--CeEEEEeCCCHHHHHHHHHHHHH
Confidence 34567899999999999999999999987 89999998843 44455555443 4678999999988877665
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 281 ~~g~id~vi~~AG~~ 295 (450)
T PRK08261 281 RHGGLDIVVHNAGIT 295 (450)
T ss_pred hCCCCCEEEECCCcC
Confidence 589999999864
No 268
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.64 E-value=6.7e-07 Score=87.21 Aligned_cols=82 Identities=21% Similarity=0.294 Sum_probs=71.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+..+.++|||++..||..+++.|+.+ |.+|++++|+.++.++..+++. .++.++++|++|.++++++.+
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~--Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~ 110 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALR--GAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK 110 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 56689999999999999999999998 7999999999988887776654 346779999999999988765
Q ss_pred ---CccEEEecCCCCC
Q 014177 108 ---DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ---~~DvVi~~agp~~ 120 (429)
..|++||+||.+.
T Consensus 111 ~~~~ldvLInNAGV~~ 126 (314)
T KOG1208|consen 111 KEGPLDVLINNAGVMA 126 (314)
T ss_pred cCCCccEEEeCccccc
Confidence 6899999999664
No 269
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=98.64 E-value=8.9e-07 Score=84.01 Aligned_cols=79 Identities=24% Similarity=0.323 Sum_probs=63.5
Q ss_pred eEEEEcCChHHHHHHHHHHhHc--CCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhcC-----
Q 014177 41 RVLVLGGTGRVGGSTAVALSKL--CPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALRD----- 108 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~--~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~~----- 108 (429)
.++|+||++.||.++++.|+++ ..|++|++.+|+.++++++.+++. .++.++++|++|.++++++++.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 5899999999999999999872 127899999999988887766543 2477899999999988776641
Q ss_pred ------ccEEEecCCCC
Q 014177 109 ------VDLVVHAAGPF 119 (429)
Q Consensus 109 ------~DvVi~~agp~ 119 (429)
.|+|||+||..
T Consensus 82 g~~~~~~~~lv~nAG~~ 98 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTL 98 (256)
T ss_pred ccCCCceEEEEeCCccc
Confidence 26999999854
No 270
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=98.62 E-value=2.6e-07 Score=107.95 Aligned_cols=171 Identities=19% Similarity=0.186 Sum_probs=109.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcC--CCceEEEEecCchhHH---HHHHHh----------CCCcEEEEeeCCC-----
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLC--PDLQIVVGSRNREKGA---AMVSTL----------GKNSEFAEVNIYN----- 98 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~--~g~~v~v~~R~~~~~~---~l~~~l----------~~~v~~~~~Dl~d----- 98 (429)
.++|+|||++||+|+++++.|++++ ..++|++..|+..... .+.... ..++.++.+|+++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 5789999999999999999999863 2478888888754322 222111 1368889999974
Q ss_pred -hHHHHHHhcCccEEEecCCCCCC------------CchHHHHHHHHHcCCcE-EEeCCChhHHHH-HHhhHHHHHH---
Q 014177 99 -EGSLLMALRDVDLVVHAAGPFQQ------------APKCTVLEAAIETKTAY-IDVCDDTIYSQR-AKSFKDRAIA--- 160 (429)
Q Consensus 99 -~~~l~~~~~~~DvVi~~agp~~~------------~~~~~v~~aa~~~gv~~-vdis~~~~~~~~-~~~~~~~a~~--- 160 (429)
.+...++.+++|+|||+|+.... .++.++++.|.+.+++. +.+|+...+... .....+....
T Consensus 1051 ~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~ 1130 (1389)
T TIGR03443 1051 SDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAGG 1130 (1389)
T ss_pred CHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhccC
Confidence 35566677799999999986432 24678899998887654 555554333110 0000000000
Q ss_pred cCCc-------EEecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCC
Q 014177 161 ANIP-------AITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAG 211 (429)
Q Consensus 161 ~g~~-------~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g 211 (429)
.+++ ...+....|+.||++++.++..+.+ .+.++..+|. ..++|+...|
T Consensus 1131 ~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rp-g~v~G~~~~g 1186 (1389)
T TIGR03443 1131 AGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRP-GYVTGDSKTG 1186 (1389)
T ss_pred CCCCcccccccccccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECC-CccccCCCcC
Confidence 0110 0111234599999999999988764 4677888887 4567876544
No 271
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=98.61 E-value=2.9e-07 Score=81.34 Aligned_cols=84 Identities=18% Similarity=0.258 Sum_probs=71.8
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC--CcEEEEeeCCChHHHHHHhc------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK--NSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~--~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
.++.+.++|+||+..||++++..|.+. |++|.+++++...+++.+..+++ +-....+|+++.++++..++
T Consensus 11 r~~sk~~~vtGg~sGIGrAia~~la~~--Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~ 88 (256)
T KOG1200|consen 11 RLMSKVAAVTGGSSGIGRAIAQLLAKK--GARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSL 88 (256)
T ss_pred HHhcceeEEecCCchHHHHHHHHHHhc--CcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhc
Confidence 456788999999999999999999997 89999999999998988888874 56778999999887666444
Q ss_pred -CccEEEecCCCCCC
Q 014177 108 -DVDLVVHAAGPFQQ 121 (429)
Q Consensus 108 -~~DvVi~~agp~~~ 121 (429)
.+++++||||...+
T Consensus 89 g~psvlVncAGItrD 103 (256)
T KOG1200|consen 89 GTPSVLVNCAGITRD 103 (256)
T ss_pred CCCcEEEEcCccccc
Confidence 68999999997653
No 272
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=98.59 E-value=4.4e-07 Score=84.88 Aligned_cols=76 Identities=25% Similarity=0.302 Sum_probs=60.7
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCceEEEEecC-chhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-------Ccc
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN-REKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR-------DVD 110 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~-~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~-------~~D 110 (429)
|+|+||+|++|.++++.|+++ |++|++.+|+ .++++.+.+.+ +.++.++++|++|.+++.++++ +.|
T Consensus 1 vlItGas~giG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~ 78 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAAD--GFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYY 78 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 689999999999999999997 8899888765 44555554443 3468899999999998877665 479
Q ss_pred EEEecCCCC
Q 014177 111 LVVHAAGPF 119 (429)
Q Consensus 111 vVi~~agp~ 119 (429)
.+||++|..
T Consensus 79 ~li~~ag~~ 87 (239)
T TIGR01831 79 GVVLNAGIT 87 (239)
T ss_pred EEEECCCCC
Confidence 999999854
No 273
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=98.58 E-value=8.2e-07 Score=84.49 Aligned_cols=155 Identities=13% Similarity=0.040 Sum_probs=107.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh-CCCcEEEEeeCCChHHHHHHhc--------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL-GKNSEFAEVNIYNEGSLLMALR-------- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l-~~~v~~~~~Dl~d~~~l~~~~~-------- 107 (429)
...|-|+|||+-...|..+|+.|.++ |+.|.+...+++.++.+..+. .++...+++|++++++++++.+
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~--Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~ 104 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKK--GFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGE 104 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhc--CCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccc
Confidence 45678999999999999999999998 899999999888888888777 5788999999999999998875
Q ss_pred -CccEEEecCCCCCCCc-----hHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecC---------CCc
Q 014177 108 -DVDLVVHAAGPFQQAP-----KCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTG---------GIY 172 (429)
Q Consensus 108 -~~DvVi~~agp~~~~~-----~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~---------g~~ 172 (429)
+.--||||||.+...| +.+-.+.+++. + +-+.........++-.+ +.|..+.+++ +..
T Consensus 105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~v--N---llG~irvT~~~lpLlr~--arGRvVnvsS~~GR~~~p~~g~ 177 (322)
T KOG1610|consen 105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNV--N---LLGTIRVTKAFLPLLRR--ARGRVVNVSSVLGRVALPALGP 177 (322)
T ss_pred ccceeEEeccccccccCccccccHHHHHHHHhh--h---hhhHHHHHHHHHHHHHh--ccCeEEEecccccCccCccccc
Confidence 4567999998554322 12334444332 2 22233333333344333 4565554442 233
Q ss_pred cchhHHHHHHHHHHHHhh---cCCCCeEEEE
Q 014177 173 PGVSNVMAAELVRVARNE---SKGEPERLRF 200 (429)
Q Consensus 173 pG~s~~~a~~~~~~~~~~---~~~~v~~i~~ 200 (429)
|..||...+..++.+++| ++.++..+..
T Consensus 178 Y~~SK~aVeaf~D~lR~EL~~fGV~VsiieP 208 (322)
T KOG1610|consen 178 YCVSKFAVEAFSDSLRRELRPFGVKVSIIEP 208 (322)
T ss_pred chhhHHHHHHHHHHHHHHHHhcCcEEEEecc
Confidence 888999999888887764 4444444443
No 274
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=98.58 E-value=1.8e-07 Score=84.44 Aligned_cols=151 Identities=17% Similarity=0.146 Sum_probs=106.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCC-CceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEec
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCP-DLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHA 115 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~-g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ 115 (429)
+++|+|+|++|.+|++|.+-+.++++ +-+.+..+. -.+|+++..+.+++++ ++-.|||+
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s------------------kd~DLt~~a~t~~lF~~ekPthVIhl 62 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS------------------KDADLTNLADTRALFESEKPTHVIHL 62 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc------------------ccccccchHHHHHHHhccCCceeeeh
Confidence 47999999999999999999998743 224444322 2468888888888887 78999999
Q ss_pred CC----CCCC------------CchHHHHHHHHHcCCcEEEeCCChhHHHH--HHhhHHHHHHcCCcEEecCCCccchhH
Q 014177 116 AG----PFQQ------------APKCTVLEAAIETKTAYIDVCDDTIYSQR--AKSFKDRAIAANIPAITTGGIYPGVSN 177 (429)
Q Consensus 116 ag----p~~~------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~--~~~~~~~a~~~g~~~i~~~g~~pG~s~ 177 (429)
|+ .+.+ .-+.+++..|-+.|++.+-.+.+...+.. ..+++|.+.-.|.+-- +.+.|...|
T Consensus 63 AAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphp--sN~gYsyAK 140 (315)
T KOG1431|consen 63 AAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHP--SNFGYSYAK 140 (315)
T ss_pred HhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCC--CchHHHHHH
Confidence 84 2322 11368999999999987655555544432 2366776655554421 234477788
Q ss_pred HHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 178 VMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 178 ~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
-++.-..+.|+++++-...++-. .+.+||.+.
T Consensus 141 r~idv~n~aY~~qhg~~~tsviP-tNvfGphDN 172 (315)
T KOG1431|consen 141 RMIDVQNQAYRQQHGRDYTSVIP-TNVFGPHDN 172 (315)
T ss_pred HHHHHHHHHHHHHhCCceeeecc-ccccCCCCC
Confidence 88887778899888888777766 578898753
No 275
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=98.57 E-value=7.6e-07 Score=78.38 Aligned_cols=78 Identities=26% Similarity=0.365 Sum_probs=58.7
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHH---H---HhCCCcEEEEeeCCChHHHHHHhc-----
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMV---S---TLGKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~---~---~l~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
++++|+||+|++|.++++.|.++ +. .|++.+|+.+..+... + ..+.++.++.+|+++.+++.++++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAER--GARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPAR 78 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHh--hCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 47999999999999999999986 54 6888888765433211 1 122456788999999888877655
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
.+|.|||+++..
T Consensus 79 ~~~id~li~~ag~~ 92 (180)
T smart00822 79 LGPLRGVIHAAGVL 92 (180)
T ss_pred cCCeeEEEEccccC
Confidence 369999999854
No 276
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.57 E-value=1.7e-07 Score=87.53 Aligned_cols=157 Identities=13% Similarity=0.027 Sum_probs=109.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh--HH--HHHH---HhCCCcEEEEeeCCChHHHHHHhc--C
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK--GA--AMVS---TLGKNSEFAEVNIYNEGSLLMALR--D 108 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~--~~--~l~~---~l~~~v~~~~~Dl~d~~~l~~~~~--~ 108 (429)
++|+.||+|-+|+-|+.+++.|++. |++|....|+... .. .+.+ .-+.++.++.+|++|...+.++++ +
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLLek--GY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~ 78 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLLEK--GYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQ 78 (345)
T ss_pred CCceEEEecccCCchHHHHHHHHhc--CcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcC
Confidence 4689999999999999999999998 8999988876332 11 1111 111347889999999999998887 7
Q ss_pred ccEEEecCCCCCC---------------CchHHHHHHHHHcC---CcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCC
Q 014177 109 VDLVVHAAGPFQQ---------------APKCTVLEAAIETK---TAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGG 170 (429)
Q Consensus 109 ~DvVi~~agp~~~---------------~~~~~v~~aa~~~g---v~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g 170 (429)
+|-|+|++++++. .|+.+++|+....| +++...|++. .+..... .......+.-|-
T Consensus 79 PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE-~fG~v~~---~pq~E~TPFyPr-- 152 (345)
T COG1089 79 PDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSE-LYGLVQE---IPQKETTPFYPR-- 152 (345)
T ss_pred chhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHH-hhcCccc---CccccCCCCCCC--
Confidence 9999999987642 36799999988765 3444444443 3332221 111223455443
Q ss_pred CccchhHHHHHHHHHHHHhhcCCCCeEEEEEee
Q 014177 171 IYPGVSNVMAAELVRVARNESKGEPERLRFSYY 203 (429)
Q Consensus 171 ~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~ 203 (429)
+.|+++|+.+.|+...|++.|+.-.+.=.+ ||
T Consensus 153 SPYAvAKlYa~W~tvNYResYgl~AcnGIL-FN 184 (345)
T COG1089 153 SPYAVAKLYAYWITVNYRESYGLFACNGIL-FN 184 (345)
T ss_pred CHHHHHHHHHHheeeehHhhcCceeeccee-ec
Confidence 449999999999999998887766544443 55
No 277
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=98.56 E-value=2.4e-07 Score=89.20 Aligned_cols=86 Identities=22% Similarity=0.219 Sum_probs=62.3
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCCCC
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQ 121 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~ 121 (429)
||||||+||||+++++.|+++ +++|++.+|+..+...... .. ..|+.+ +.+.+.++++|+|||||+....
T Consensus 1 vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~-----~~--~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~ 70 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKD--GHEVTILTRSPPAGANTKW-----EG--YKPWAP-LAESEALEGADAVINLAGEPIA 70 (292)
T ss_pred CEEEcccchhhHHHHHHHHHc--CCEEEEEeCCCCCCCcccc-----ee--eecccc-cchhhhcCCCCEEEECCCCCcc
Confidence 689999999999999999997 7999999998876432210 11 112222 3455667899999999975321
Q ss_pred -----------------CchHHHHHHHHHcCCc
Q 014177 122 -----------------APKCTVLEAAIETKTA 137 (429)
Q Consensus 122 -----------------~~~~~v~~aa~~~gv~ 137 (429)
.++.+++++|.+.+++
T Consensus 71 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~ 103 (292)
T TIGR01777 71 DKRWTEERKQEIRDSRIDTTRALVEAIAAAEQK 103 (292)
T ss_pred cccCCHHHHHHHHhcccHHHHHHHHHHHhcCCC
Confidence 1357888999999873
No 278
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=98.56 E-value=3.7e-07 Score=85.11 Aligned_cols=76 Identities=21% Similarity=0.351 Sum_probs=60.5
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-hhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-------Ccc
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-EKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR-------DVD 110 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~-------~~D 110 (429)
++|+|++|++|+.+++.|+++ |++|++.+|+. ++++.+.+.+ +.++.++.+|++|.+++++++. .+|
T Consensus 1 vlItG~~g~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 78 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKE--GAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPID 78 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 589999999999999999997 78999998875 4444443332 2357789999999998877765 469
Q ss_pred EEEecCCCC
Q 014177 111 LVVHAAGPF 119 (429)
Q Consensus 111 vVi~~agp~ 119 (429)
.|||++|..
T Consensus 79 ~vi~~ag~~ 87 (239)
T TIGR01830 79 ILVNNAGIT 87 (239)
T ss_pred EEEECCCCC
Confidence 999999864
No 279
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=98.55 E-value=3.1e-07 Score=86.89 Aligned_cols=97 Identities=20% Similarity=0.243 Sum_probs=78.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ag 117 (429)
|+|+|+||||. |+.+++.|.+. +++|++..++....+.+.. .....+..+..|.+++.++++ ++|+||+++.
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~--g~~v~~s~~t~~~~~~~~~---~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtH 74 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQ--GIEILVTVTTSEGKHLYPI---HQALTVHTGALDPQELREFLKRHSIDILVDATH 74 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhC--CCeEEEEEccCCccccccc---cCCceEEECCCCHHHHHHHHHhcCCCEEEEcCC
Confidence 58999999998 99999999987 7899998888765544432 123456677888888988887 6999999999
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
||...-+.++.++|.+.|++|+-+-
T Consensus 75 PfA~~is~~a~~a~~~~~ipylR~e 99 (256)
T TIGR00715 75 PFAAQITTNATAVCKELGIPYVRFE 99 (256)
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEE
Confidence 9875445789999999999999663
No 280
>PLN00015 protochlorophyllide reductase
Probab=98.55 E-value=3.5e-07 Score=89.41 Aligned_cols=75 Identities=19% Similarity=0.301 Sum_probs=63.3
Q ss_pred EEEcCChHHHHHHHHHHhHcCCC-ceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc-------CccE
Q 014177 43 LVLGGTGRVGGSTAVALSKLCPD-LQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR-------DVDL 111 (429)
Q Consensus 43 lV~Ga~G~iG~~l~~~L~~~~~g-~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~-------~~Dv 111 (429)
+||||++.||.++++.|+++ | ++|++.+|+.++++.+.+.+. .++.++++|++|.++++++++ ++|+
T Consensus 1 lITGas~GIG~aia~~l~~~--G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~ 78 (308)
T PLN00015 1 IITGASSGLGLATAKALAET--GKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV 78 (308)
T ss_pred CEeCCCChHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence 59999999999999999997 7 899999999888877766653 356788999999998877664 5899
Q ss_pred EEecCCCC
Q 014177 112 VVHAAGPF 119 (429)
Q Consensus 112 Vi~~agp~ 119 (429)
+||+||..
T Consensus 79 lInnAG~~ 86 (308)
T PLN00015 79 LVCNAAVY 86 (308)
T ss_pred EEECCCcC
Confidence 99999853
No 281
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=98.54 E-value=5.4e-07 Score=81.70 Aligned_cols=84 Identities=24% Similarity=0.383 Sum_probs=69.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHH---hC-CCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVST---LG-KNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~---l~-~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
++.+|+++++|+.|.||.+.++.|+++ +..+.+++-+.++.+..++. .+ .++-++++|+++..++++.++
T Consensus 2 ~~tGKna~vtggagGIGl~~sk~Ll~k--gik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~ 79 (261)
T KOG4169|consen 2 DLTGKNALVTGGAGGIGLATSKALLEK--GIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA 79 (261)
T ss_pred cccCceEEEecCCchhhHHHHHHHHHc--CchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence 467899999999999999999999998 78888887777776655432 22 357899999999988888776
Q ss_pred ---CccEEEecCCCCCC
Q 014177 108 ---DVDLVVHAAGPFQQ 121 (429)
Q Consensus 108 ---~~DvVi~~agp~~~ 121 (429)
.+|++||.||...+
T Consensus 80 ~fg~iDIlINgAGi~~d 96 (261)
T KOG4169|consen 80 TFGTIDILINGAGILDD 96 (261)
T ss_pred HhCceEEEEcccccccc
Confidence 58999999998764
No 282
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.53 E-value=1.5e-06 Score=82.85 Aligned_cols=73 Identities=29% Similarity=0.365 Sum_probs=67.0
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
++|+|+||||++|+++++.|+++ +++|.++.|+++++..+. ..+++...|+.+.+++...+++.|.++++.+.
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~--~~~v~~~~r~~~~~~~~~----~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~ 73 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLAR--GHEVRAAVRNPEAAAALA----GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGL 73 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhC--CCEEEEEEeCHHHHHhhc----CCcEEEEeccCCHhHHHHHhccccEEEEEecc
Confidence 57999999999999999999998 899999999999887765 46899999999999999999999999999874
No 283
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=98.53 E-value=8.7e-07 Score=85.85 Aligned_cols=138 Identities=10% Similarity=0.098 Sum_probs=93.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCce-EEEEecCc---hhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhcCc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQ-IVVGSRNR---EKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALRDV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~-v~v~~R~~---~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~~~ 109 (429)
+++++++|+|+ |.+|++++..|.+. |++ |++++|+. ++++++.+++. ..+....+|+.+.+++.+.++.+
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~--G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~ 200 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALD--GAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASS 200 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHC--CCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccC
Confidence 35689999998 67999999999987 664 99999997 67777776653 23456678998888888888899
Q ss_pred cEEEecCCCCC--CCchHHH-HHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHH
Q 014177 110 DLVVHAAGPFQ--QAPKCTV-LEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRV 186 (429)
Q Consensus 110 DvVi~~agp~~--~~~~~~v-~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~ 186 (429)
|+||||...-. .....++ -...+..+...+|+...+. ..++-..+++.|..++.| -.++..+.+..
T Consensus 201 DilINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~----~T~ll~~A~~~G~~~~~G-------~~ML~~Qa~~~ 269 (289)
T PRK12548 201 DILVNATLVGMKPNDGETNIKDTSVFRKDLVVADTVYNPK----KTKLLEDAEAAGCKTVGG-------LGMLLWQGAEA 269 (289)
T ss_pred CEEEEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecCCCC----CCHHHHHHHHCCCeeeCc-------HHHHHHHHHHH
Confidence 99999984321 1111122 1223444555678775542 235566788888776544 24566677665
Q ss_pred HH
Q 014177 187 AR 188 (429)
Q Consensus 187 ~~ 188 (429)
+.
T Consensus 270 f~ 271 (289)
T PRK12548 270 YK 271 (289)
T ss_pred HH
Confidence 43
No 284
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=98.53 E-value=5.6e-07 Score=87.67 Aligned_cols=81 Identities=16% Similarity=0.187 Sum_probs=59.2
Q ss_pred CCCCCCeEEEEcC--ChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC------------C----CcEEEEeeC
Q 014177 35 MKNRNARVLVLGG--TGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG------------K----NSEFAEVNI 96 (429)
Q Consensus 35 ~~~~~~~VlV~Ga--~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~------------~----~v~~~~~Dl 96 (429)
.++++|.+||||| +..||.++++.|++. |++|++ +|+.++++++...+. + ....+.+|+
T Consensus 5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~--Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 81 (303)
T PLN02730 5 IDLRGKRAFIAGVADDNGYGWAIAKALAAA--GAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDA 81 (303)
T ss_pred cCCCCCEEEEeCCCCCCcHHHHHHHHHHHC--CCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecce
Confidence 3488999999999 677999999999997 899988 788777766653331 0 135677888
Q ss_pred --CChH------------------HHHHHhc-------CccEEEecCCC
Q 014177 97 --YNEG------------------SLLMALR-------DVDLVVHAAGP 118 (429)
Q Consensus 97 --~d~~------------------~l~~~~~-------~~DvVi~~agp 118 (429)
++.+ +++++++ ++|++|||||.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~ 130 (303)
T PLN02730 82 VFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLAN 130 (303)
T ss_pred ecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 3222 4555443 58999999963
No 285
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=98.52 E-value=3.1e-07 Score=87.38 Aligned_cols=129 Identities=20% Similarity=0.269 Sum_probs=83.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEE-EecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVV-GSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v-~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
+++|.|+|++|.+|+.+++.+.+. ++++++. ++++.++.... ...++...++++++++++|+||.++.
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~-~~~elvav~d~~~~~~~~~----------~~~~i~~~~dl~~ll~~~DvVid~t~ 69 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAA-EDLELVAAVDRPGSPLVGQ----------GALGVAITDDLEAVLADADVLIDFTT 69 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCCcccccc----------CCCCccccCCHHHhccCCCEEEECCC
Confidence 368999998899999999988774 5777765 56766544322 11233333456667778999999997
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEeCCChhHH-HHHHhhHHHHHHcCCcEEecCCCccc--hhHHHHHHHHH
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDVCDDTIYS-QRAKSFKDRAIAANIPAITTGGIYPG--VSNVMAAELVR 185 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdis~~~~~~-~~~~~~~~~a~~~g~~~i~~~g~~pG--~s~~~a~~~~~ 185 (429)
|... ..+++.|+++|++.+.-+ ..+. .....+.+ +. ++++++....++.| +...++..++.
T Consensus 70 p~~~---~~~~~~al~~G~~vvigt--tG~s~~~~~~l~~-aa-~~~~v~~s~n~s~g~~~~~~l~~~aa~ 133 (257)
T PRK00048 70 PEAT---LENLEFALEHGKPLVIGT--TGFTEEQLAELEE-AA-KKIPVVIAPNFSIGVNLLMKLAEKAAK 133 (257)
T ss_pred HHHH---HHHHHHHHHcCCCEEEEC--CCCCHHHHHHHHH-Hh-cCCCEEEECcchHHHHHHHHHHHHHHH
Confidence 6543 688999999999998432 2222 23334444 22 55666666556544 34444555554
No 286
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.51 E-value=7.1e-07 Score=81.29 Aligned_cols=107 Identities=22% Similarity=0.251 Sum_probs=78.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
++++++++|+||+|.+|+.+++.|.+. +.+|++.+|+.++++.+.+.+. .......+|..+.+++.+.++++|+||
T Consensus 25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~--g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi 102 (194)
T cd01078 25 DLKGKTAVVLGGTGPVGQRAAVLLARE--GARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVF 102 (194)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEE
Confidence 467789999999999999999999986 6899999999999888877653 134566788889888889999999999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCcEEEeCCChh
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTI 146 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~ 146 (429)
++.. ..... ....+.+.+.+.-.+|++....
T Consensus 103 ~at~-~g~~~-~~~~~~~~~~~~vv~D~~~~~~ 133 (194)
T cd01078 103 AAGA-AGVEL-LEKLAWAPKPLAVAADVNAVPP 133 (194)
T ss_pred ECCC-CCcee-chhhhcccCceeEEEEccCCCC
Confidence 9763 22210 1222222223445677765543
No 287
>PRK07578 short chain dehydrogenase; Provisional
Probab=98.50 E-value=7.4e-07 Score=81.17 Aligned_cols=63 Identities=30% Similarity=0.500 Sum_probs=54.1
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---CccEEEecC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---DVDLVVHAA 116 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---~~DvVi~~a 116 (429)
|+++|+||+|.+|+++++.|.++ ++|++.+|+.+ .+++|++|.++++++++ ++|+|||++
T Consensus 1 ~~vlItGas~giG~~la~~l~~~---~~vi~~~r~~~--------------~~~~D~~~~~~~~~~~~~~~~id~lv~~a 63 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR---HEVITAGRSSG--------------DVQVDITDPASIRALFEKVGKVDAVVSAA 63 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc---CcEEEEecCCC--------------ceEecCCChHHHHHHHHhcCCCCEEEECC
Confidence 47999999999999999999885 68999888753 36899999998888776 789999999
Q ss_pred CCC
Q 014177 117 GPF 119 (429)
Q Consensus 117 gp~ 119 (429)
|..
T Consensus 64 g~~ 66 (199)
T PRK07578 64 GKV 66 (199)
T ss_pred CCC
Confidence 853
No 288
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=98.47 E-value=1.7e-06 Score=86.67 Aligned_cols=101 Identities=22% Similarity=0.319 Sum_probs=67.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHH-HhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLM-ALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~-~~~~~DvVi~~ 115 (429)
.++++|.|+||+|++|+.+++.|.++ |..+|+...++....+.+....+ .....|+.+.++++. .++++|+||.+
T Consensus 36 ~~~~kVaIvGATG~vG~eLlrlL~~h-P~~el~~l~s~~saG~~i~~~~~---~l~~~~~~~~~~~~~~~~~~~DvVf~A 111 (381)
T PLN02968 36 EEKKRIFVLGASGYTGAEVRRLLANH-PDFEITVMTADRKAGQSFGSVFP---HLITQDLPNLVAVKDADFSDVDAVFCC 111 (381)
T ss_pred ccccEEEEECCCChHHHHHHHHHHhC-CCCeEEEEEChhhcCCCchhhCc---cccCccccceecCCHHHhcCCCEEEEc
Confidence 36679999999999999999999885 88999998876554433322221 112223332222222 24789999998
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
++.-. ..+++.+. +.|+..||++++.
T Consensus 112 lp~~~---s~~i~~~~-~~g~~VIDlSs~f 137 (381)
T PLN02968 112 LPHGT---TQEIIKAL-PKDLKIVDLSADF 137 (381)
T ss_pred CCHHH---HHHHHHHH-hCCCEEEEcCchh
Confidence 75321 25666664 6889999999764
No 289
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=98.47 E-value=1.8e-06 Score=78.31 Aligned_cols=84 Identities=15% Similarity=0.261 Sum_probs=66.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEe-cCchhHHHHHHH---hCCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGS-RNREKGAAMVST---LGKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~-R~~~~~~~l~~~---l~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
|.++.++|+||.-.||-.++++|++. ++.+++++. |+++++....+. .+.++.++++|+++.+++.++.+
T Consensus 1 Mspksv~ItGaNRGIGlgLVk~llk~-~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~i 79 (249)
T KOG1611|consen 1 MSPKSVFITGANRGIGLGLVKELLKD-KGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKI 79 (249)
T ss_pred CCCccEEEeccCcchhHHHHHHHhcC-CCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhh
Confidence 44677999999999999999999984 677777765 568884333222 24689999999999998888764
Q ss_pred ----CccEEEecCCCCCC
Q 014177 108 ----DVDLVVHAAGPFQQ 121 (429)
Q Consensus 108 ----~~DvVi~~agp~~~ 121 (429)
+.|++||+||.+..
T Consensus 80 Vg~~GlnlLinNaGi~~~ 97 (249)
T KOG1611|consen 80 VGSDGLNLLINNAGIALS 97 (249)
T ss_pred cccCCceEEEeccceeee
Confidence 68999999997654
No 290
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.45 E-value=3.6e-06 Score=73.22 Aligned_cols=84 Identities=20% Similarity=0.175 Sum_probs=75.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---CccEE
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---DVDLV 112 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---~~DvV 112 (429)
++.++.|+++|+.-.||+.++..|.+. |.+|+.+.|+++.+..+.++.+..++.+++|+.+.+.+.+.+. ..|.+
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La~a--GA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgL 81 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLAKA--GAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGL 81 (245)
T ss_pred cccceEEEeecccccccHHHHHHHHhc--CCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhh
Confidence 467889999998888999999999997 8999999999999999999888778999999999999988876 57999
Q ss_pred EecCCCCCC
Q 014177 113 VHAAGPFQQ 121 (429)
Q Consensus 113 i~~agp~~~ 121 (429)
+|+||....
T Consensus 82 VNNAgvA~~ 90 (245)
T KOG1207|consen 82 VNNAGVATN 90 (245)
T ss_pred hccchhhhc
Confidence 999987654
No 291
>TIGR01921 DAP-DH diaminopimelate dehydrogenase. This model represents the diaminopimelate dehydrogenase enzyme which provides an alternate (shortcut) route of lysine buiosynthesis in Corynebacterium, Bacterioides, Porphyromonas and scattered other species. The enzyme from Corynebacterium glutamicum has been crystallized and characterized.
Probab=98.45 E-value=3.2e-06 Score=82.15 Aligned_cols=123 Identities=20% Similarity=0.263 Sum_probs=84.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEE-EecCc-hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVV-GSRNR-EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v-~~R~~-~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++.||.|+| +|.+|+.+++.+.+ .++.+++. .+|+. +++. .. +... ...| ..+++.++|+|+.|
T Consensus 2 ~kIRVgIVG-~GnIGr~~a~al~~-~pd~ELVgV~dr~~~~~~~---~~----~~v~--~~~d---~~e~l~~iDVViIc 67 (324)
T TIGR01921 2 SKIRAAIVG-YGNLGRSVEKAIQQ-QPDMELVGVFSRRGAETLD---TE----TPVY--AVAD---DEKHLDDVDVLILC 67 (324)
T ss_pred CCcEEEEEe-ecHHHHHHHHHHHh-CCCcEEEEEEcCCcHHHHh---hc----CCcc--ccCC---HHHhccCCCEEEEc
Confidence 457999999 79999999999887 47888876 47764 3221 11 1111 1223 33345789999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChh-HHHHHHhhHHHHHHcCCcEEecCCCccchhH
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTI-YSQRAKSFKDRAIAANIPAITTGGIYPGVSN 177 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~-~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~ 177 (429)
.+.... .+.+..++++|.|.||...... .-.....++..+++.|...++++||+||.-.
T Consensus 68 tPs~th---~~~~~~~L~aG~NVV~s~~~h~~~p~~~~~ld~AAk~~g~vsvi~~GwDPG~~s 127 (324)
T TIGR01921 68 MGSATD---IPEQAPYFAQFANTVDSFDNHRDIPRHRQVMDAAAKAAGNVSVISTGWDPGMFS 127 (324)
T ss_pred CCCccC---HHHHHHHHHcCCCEEECCCcccCCHHHHHHHHHHHHHcCCEEEEECCCCcChHH
Confidence 755443 6888889999999998753211 1123446777777777788888999999855
No 292
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=98.43 E-value=1.1e-06 Score=79.22 Aligned_cols=78 Identities=27% Similarity=0.431 Sum_probs=53.9
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch---hHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-------
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE---KGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~---~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
.++|+||.|.+|..+++.|++++ ..+|++.+|+.. ..++..+++ +.++.++++|++|.+++.++++
T Consensus 2 tylitGG~gglg~~la~~La~~~-~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERG-ARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFG 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT--SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred EEEEECCccHHHHHHHHHHHHcC-CCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence 58999999999999999999974 568999999821 222222222 3568899999999999998875
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
.++.|||++|..
T Consensus 81 ~i~gVih~ag~~ 92 (181)
T PF08659_consen 81 PIDGVIHAAGVL 92 (181)
T ss_dssp -EEEEEE-----
T ss_pred Ccceeeeeeeee
Confidence 468899999864
No 293
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=98.42 E-value=1e-06 Score=82.36 Aligned_cols=66 Identities=29% Similarity=0.356 Sum_probs=49.3
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-CccEEEecCCCC
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-DVDLVVHAAGPF 119 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-~~DvVi~~agp~ 119 (429)
|+|+||||+||++++..|.+. |++|++..|++.+.+.... ..+. ..+.+.+... ++|+|||+||..
T Consensus 1 IliTGgTGlIG~~L~~~L~~~--gh~v~iltR~~~~~~~~~~---~~v~-------~~~~~~~~~~~~~DavINLAG~~ 67 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKG--GHQVTILTRRPPKASQNLH---PNVT-------LWEGLADALTLGIDAVINLAGEP 67 (297)
T ss_pred CeEeccccchhHHHHHHHHhC--CCeEEEEEcCCcchhhhcC---cccc-------ccchhhhcccCCCCEEEECCCCc
Confidence 689999999999999999987 8999999999887653221 1111 1233444555 799999999853
No 294
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=98.40 E-value=2.1e-06 Score=72.00 Aligned_cols=96 Identities=25% Similarity=0.336 Sum_probs=65.5
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHhC--CCc-EEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTLG--KNS-EFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l~--~~v-~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
||.|+||+|++|+.+++.|.+ +|.++++.+ +++.+..+.+....+ ... +...-| .+.+. +.++|+||.|.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~-hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~Dvvf~a~ 74 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAE-HPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED-ADPEE----LSDVDVVFLAL 74 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHH-TSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE-TSGHH----HTTESEEEE-S
T ss_pred CEEEECCCCHHHHHHHHHHhc-CCCccEEEeeeeccccCCeeehhccccccccceeEee-cchhH----hhcCCEEEecC
Confidence 689999999999999999999 688886654 444424344433322 112 222223 34332 37999999997
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
+.... ..+...+++.|++.||.+++.
T Consensus 75 ~~~~~---~~~~~~~~~~g~~ViD~s~~~ 100 (121)
T PF01118_consen 75 PHGAS---KELAPKLLKAGIKVIDLSGDF 100 (121)
T ss_dssp CHHHH---HHHHHHHHHTTSEEEESSSTT
T ss_pred chhHH---HHHHHHHhhCCcEEEeCCHHH
Confidence 64322 677888899999999999765
No 295
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=98.40 E-value=1e-06 Score=84.08 Aligned_cols=78 Identities=22% Similarity=0.382 Sum_probs=59.8
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec-CchhHHHHHHHhC----CCcEEEEeeCCChHHH----HHHh----
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR-NREKGAAMVSTLG----KNSEFAEVNIYNEGSL----LMAL---- 106 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R-~~~~~~~l~~~l~----~~v~~~~~Dl~d~~~l----~~~~---- 106 (429)
+.++|+||+|+||+++++.|+++ |++|++.+| +.++++.+.+.+. .++..+.+|++|.+++ ++++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~--G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~ 79 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQE--GYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACF 79 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhC--CCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHH
Confidence 47999999999999999999997 889988765 4566666655542 3456789999998754 3332
Q ss_pred ---cCccEEEecCCCC
Q 014177 107 ---RDVDLVVHAAGPF 119 (429)
Q Consensus 107 ---~~~DvVi~~agp~ 119 (429)
.++|+||||||..
T Consensus 80 ~~~g~iD~lv~nAG~~ 95 (267)
T TIGR02685 80 RAFGRCDVLVNNASAF 95 (267)
T ss_pred HccCCceEEEECCccC
Confidence 3689999999854
No 296
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=98.38 E-value=1.9e-06 Score=75.31 Aligned_cols=121 Identities=20% Similarity=0.250 Sum_probs=82.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+++++++|+|+ |.+|+.+++.|.+.+ ..+|++.+|+.++.+++.+.+... .+..+..+. .+.++++|+||+|+
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g-~~~v~v~~r~~~~~~~~~~~~~~~--~~~~~~~~~---~~~~~~~Dvvi~~~ 89 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELG-AAKIVIVNRTLEKAKALAERFGEL--GIAIAYLDL---EELLAEADLIINTT 89 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHhhc--ccceeecch---hhccccCCEEEeCc
Confidence 45689999996 889999999999863 368999999999888877665421 122344443 34478999999999
Q ss_pred CCCCC-CchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEec
Q 014177 117 GPFQQ-APKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITT 168 (429)
Q Consensus 117 gp~~~-~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~ 168 (429)
++... .....+...+++.+...+|+++..... .+.+.+++.|..++.|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~~~~----~l~~~~~~~g~~~v~g 138 (155)
T cd01065 90 PVGMKPGDELPLPPSLLKPGGVVYDVVYNPLET----PLLKEARALGAKTIDG 138 (155)
T ss_pred CCCCCCCCCCCCCHHHcCCCCEEEEcCcCCCCC----HHHHHHHHCCCceeCC
Confidence 76442 111223345567888889998654321 5566677778765443
No 297
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=98.32 E-value=1e-05 Score=77.59 Aligned_cols=141 Identities=21% Similarity=0.266 Sum_probs=96.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
|++++|.|+| +|.+|+.+++.|.+..++++++ +.+|++++.+++.+.++. ... ..+ +++++.++|+|+-|
T Consensus 4 m~~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~-~~~----~~~---~eell~~~D~Vvi~ 74 (271)
T PRK13302 4 RPELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRR-PPP----VVP---LDQLATHADIVVEA 74 (271)
T ss_pred CCeeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCC-Ccc----cCC---HHHHhcCCCEEEEC
Confidence 6678999999 7999999999998732577776 678898888777665431 011 123 44456789999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCC
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEP 195 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v 195 (429)
+++... ..+.+.++++|.+.+..+... . .....+.+.++++|..+.+.+|+.-|.. ..+. -...++
T Consensus 75 tp~~~h---~e~~~~aL~aGk~Vi~~s~ga-l-~~~~~L~~~A~~~g~~l~v~sGa~~g~d------~l~~---g~iG~~ 140 (271)
T PRK13302 75 APASVL---RAIVEPVLAAGKKAIVLSVGA-L-LRNEDLIDLARQNGGQIIVPTGALLGLD------AVTA---AAEGTI 140 (271)
T ss_pred CCcHHH---HHHHHHHHHcCCcEEEecchh-H-HhHHHHHHHHHHcCCEEEEcchHHHhHH------HHHH---HHcCCc
Confidence 875433 577889999999998764221 1 2334667778889999888766665542 2221 123567
Q ss_pred eEEEE
Q 014177 196 ERLRF 200 (429)
Q Consensus 196 ~~i~~ 200 (429)
+.+++
T Consensus 141 ~~v~~ 145 (271)
T PRK13302 141 HSVKM 145 (271)
T ss_pred eEEEE
Confidence 77776
No 298
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=98.31 E-value=3.3e-06 Score=81.67 Aligned_cols=140 Identities=17% Similarity=0.253 Sum_probs=89.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEE--EEeeCCChHHHHHHhcCccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEF--AEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~--~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+|+||.|+||+|+.|..+.+.|.. +|..++.++..+..+.+.+.+.++.-... .....-|.+.+ ..++||+||.|
T Consensus 1 ~~~kV~IvGasGYtG~EL~rlL~~-Hp~ve~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~~~~~~~~--~~~~~DvvFla 77 (349)
T COG0002 1 MMIKVGIVGASGYTGLELLRLLAG-HPDVELILISSRERAGKPVSDVHPNLRGLVDLPFQTIDPEKI--ELDECDVVFLA 77 (349)
T ss_pred CCceEEEEcCCCCcHHHHHHHHhc-CCCeEEEEeechhhcCCchHHhCcccccccccccccCChhhh--hcccCCEEEEe
Confidence 468999999999999999999998 58999877765554444454444311111 22222233333 34579999988
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhH-----HHHH------------------HhhH-HHHHHcCCcEEecCCC
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIY-----SQRA------------------KSFK-DRAIAANIPAITTGGI 171 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~-----~~~~------------------~~~~-~~a~~~g~~~i~~~g~ 171 (429)
.. ... ...++....+.|++.||+|++.-+ |+.. .+++ ++. ++...|-..|+
T Consensus 78 lP-hg~--s~~~v~~l~~~g~~VIDLSadfR~~d~~~ye~~Yg~~h~~~~~l~~avYGLpEl~~e~i--~~A~lIAnPGC 152 (349)
T COG0002 78 LP-HGV--SAELVPELLEAGCKVIDLSADFRLKDPEVYEKWYGFTHAGPELLEDAVYGLPELHREKI--RGAKLIANPGC 152 (349)
T ss_pred cC-chh--HHHHHHHHHhCCCeEEECCcccccCCHHHHHHhhCCCCCCchhhhcccccCcccCHHHH--hcCCEeeCCCc
Confidence 64 322 257777888889999999987422 1111 0121 222 34556667778
Q ss_pred ccchhHHHHHHHHH
Q 014177 172 YPGVSNVMAAELVR 185 (429)
Q Consensus 172 ~pG~s~~~a~~~~~ 185 (429)
.|-.+-+...-+.+
T Consensus 153 ypTa~iLal~PL~~ 166 (349)
T COG0002 153 YPTAAILALAPLVK 166 (349)
T ss_pred hHHHHHHHHHHHHH
Confidence 88878777777775
No 299
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=98.29 E-value=4.9e-06 Score=78.41 Aligned_cols=83 Identities=22% Similarity=0.338 Sum_probs=64.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh--HHHHHHHhC----CCcEEEEeeCCC-hHHHHHHhc-
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK--GAAMVSTLG----KNSEFAEVNIYN-EGSLLMALR- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~--~~~l~~~l~----~~v~~~~~Dl~d-~~~l~~~~~- 107 (429)
.+.++.++||||++.+|..+++.|+++ |+.++++.|+.+. .+.+.+... ..+....+|+++ .++++.+++
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~ 79 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALARE--GARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAA 79 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHH
Confidence 367899999999999999999999976 8898888777553 444444333 356778899998 777766654
Q ss_pred ------CccEEEecCCCCC
Q 014177 108 ------DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ------~~DvVi~~agp~~ 120 (429)
++|++||+||...
T Consensus 80 ~~~~~g~id~lvnnAg~~~ 98 (251)
T COG1028 80 AEEEFGRIDILVNNAGIAG 98 (251)
T ss_pred HHHHcCCCCEEEECCCCCC
Confidence 4899999998653
No 300
>PLN00106 malate dehydrogenase
Probab=98.29 E-value=8e-06 Score=80.02 Aligned_cols=98 Identities=19% Similarity=0.193 Sum_probs=64.1
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
.||+|+|++|.||+.++..|..++-..++++.|+++...+ +-++. ........++.+.+++.+.++++|+||++||.
T Consensus 19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~--a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~ 96 (323)
T PLN00106 19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGV--AADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGV 96 (323)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCee--EchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCC
Confidence 6999999999999999999987533448999998772221 11111 11122344554445577889999999999985
Q ss_pred CCCCc-------------hHHHHHHHHHcCCcEE
Q 014177 119 FQQAP-------------KCTVLEAAIETKTAYI 139 (429)
Q Consensus 119 ~~~~~-------------~~~v~~aa~~~gv~~v 139 (429)
....+ ..++++...+++.+.+
T Consensus 97 ~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~ai 130 (323)
T PLN00106 97 PRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNAL 130 (323)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeE
Confidence 43211 2445566666665543
No 301
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=98.28 E-value=2.2e-06 Score=85.08 Aligned_cols=101 Identities=18% Similarity=0.192 Sum_probs=67.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEE-EEeeCCChHHHHHHhcCccEEEecC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEF-AEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~-~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+|++|.|+||+|++|+.+++.|.+ +++++++.+.++.+..+.+.+..+ .+.. ...++.+.+.. ..+++|+|+-|+
T Consensus 1 ~m~kVaIiGAtG~vG~~l~~~L~~-~p~~elv~v~~~~~~g~~l~~~~~-~~~~~~~~~~~~~~~~--~~~~vD~Vf~al 76 (343)
T PRK00436 1 MMIKVGIVGASGYTGGELLRLLLN-HPEVEIVAVTSRSSAGKPLSDVHP-HLRGLVDLVLEPLDPE--ILAGADVVFLAL 76 (343)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHc-CCCceEEEEECccccCcchHHhCc-ccccccCceeecCCHH--HhcCCCEEEECC
Confidence 357999999999999999999987 478888776554443333333222 1111 12233333322 346899999887
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
+.... .+++..+.++|++.||.|++.
T Consensus 77 P~~~~---~~~v~~a~~aG~~VID~S~~f 102 (343)
T PRK00436 77 PHGVS---MDLAPQLLEAGVKVIDLSADF 102 (343)
T ss_pred CcHHH---HHHHHHHHhCCCEEEECCccc
Confidence 54322 678888889999999999764
No 302
>PTZ00325 malate dehydrogenase; Provisional
Probab=98.27 E-value=3.5e-05 Score=75.43 Aligned_cols=104 Identities=18% Similarity=0.142 Sum_probs=70.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++|++|+|+|++|.||+.++..|+.++-..++++.|++....+ +-++. ........+.+|.++..+.++++|+||++
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~--a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVit 83 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGV--AADLSHIDTPAKVTGYADGELWEKALRGADLVLIC 83 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCccc--ccchhhcCcCceEEEecCCCchHHHhCCCCEEEEC
Confidence 6778999999889999999999986533468999998432221 11111 11133455666655556788999999999
Q ss_pred CCCCCCC-------------chHHHHHHHHHcCCcEEEeC
Q 014177 116 AGPFQQA-------------PKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 116 agp~~~~-------------~~~~v~~aa~~~gv~~vdis 142 (429)
+|..... ...+++++..+++.+.+.+.
T Consensus 84 aG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv 123 (321)
T PTZ00325 84 AGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGI 123 (321)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 9864321 13456677778888765443
No 303
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=98.22 E-value=1.3e-05 Score=76.56 Aligned_cols=140 Identities=19% Similarity=0.190 Sum_probs=93.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCce-EEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQ-IVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~-v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
|++|.|+| +|.+|+.+++.|.+..++++ +.+++|++++.+.+.+..+ ... ..| +++++.++|+|+.|++
T Consensus 1 mmrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~~--~~~----~~~---~~ell~~~DvVvi~a~ 70 (265)
T PRK13304 1 MLKIGIVG-CGAIASLITKAILSGRINAELYAFYDRNLEKAENLASKTG--AKA----CLS---IDELVEDVDLVVECAS 70 (265)
T ss_pred CCEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhcC--Cee----ECC---HHHHhcCCCEEEEcCC
Confidence 36899999 69999999999987522455 4467888888877765432 111 123 4455578999999987
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEeCCChh-HHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCCe
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDVCDDTI-YSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPE 196 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdis~~~~-~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~ 196 (429)
+... ..+.+.++++|.+.+..+...- -......+.+.++++|..+.+.+|...|...+-+ -...++.
T Consensus 71 ~~~~---~~~~~~al~~Gk~Vvv~s~gAl~d~~~~~~L~~aA~~~g~~l~v~sga~~g~d~i~a---------~~~G~i~ 138 (265)
T PRK13304 71 VNAV---EEVVPKSLENGKDVIIMSVGALADKELFLKLYKLAKENNCKIYLPSGAIVGLDGIKA---------ASLGEIK 138 (265)
T ss_pred hHHH---HHHHHHHHHcCCCEEEEchHHhcCHHHHHHHHHHHHHcCCEEEEeCchHHhHHHHHH---------HhcCCcc
Confidence 6543 5778888999999987653110 0112346667788889888877666666533311 1245667
Q ss_pred EEEE
Q 014177 197 RLRF 200 (429)
Q Consensus 197 ~i~~ 200 (429)
.+++
T Consensus 139 ~V~~ 142 (265)
T PRK13304 139 SVTL 142 (265)
T ss_pred EEEE
Confidence 7776
No 304
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.21 E-value=4.3e-06 Score=71.54 Aligned_cols=76 Identities=28% Similarity=0.477 Sum_probs=59.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
++.+++++|+|+ |.+|+.++..|.+. +. +|++++|+.++++++.+.++ ...+...++.+ +.+.+.++|+|||
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~--g~~~i~i~nRt~~ra~~l~~~~~-~~~~~~~~~~~---~~~~~~~~DivI~ 81 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAAL--GAKEITIVNRTPERAEALAEEFG-GVNIEAIPLED---LEEALQEADIVIN 81 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHT--TSSEEEEEESSHHHHHHHHHHHT-GCSEEEEEGGG---HCHHHHTESEEEE
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHcC-ccccceeeHHH---HHHHHhhCCeEEE
Confidence 578899999996 66999999999997 55 59999999999999998884 22333445434 4467789999999
Q ss_pred cCCC
Q 014177 115 AAGP 118 (429)
Q Consensus 115 ~agp 118 (429)
|.+.
T Consensus 82 aT~~ 85 (135)
T PF01488_consen 82 ATPS 85 (135)
T ss_dssp -SST
T ss_pred ecCC
Confidence 9753
No 305
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.20 E-value=6.7e-06 Score=80.75 Aligned_cols=99 Identities=23% Similarity=0.258 Sum_probs=68.9
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
..++.+++|+|+||+|++|+.+++.|.+++.-.++++.+|+.+++..+..++. ..|+. .+.+.+.++|+||
T Consensus 150 g~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~------~~~i~---~l~~~l~~aDiVv 220 (340)
T PRK14982 150 GIDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG------GGKIL---SLEEALPEADIVV 220 (340)
T ss_pred ccCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc------cccHH---hHHHHHccCCEEE
Confidence 34678899999999999999999999864212589999999888888776543 12332 3667888999999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
|+++..... .+-..-++.+.-.+|++--
T Consensus 221 ~~ts~~~~~---~I~~~~l~~~~~viDiAvP 248 (340)
T PRK14982 221 WVASMPKGV---EIDPETLKKPCLMIDGGYP 248 (340)
T ss_pred ECCcCCcCC---cCCHHHhCCCeEEEEecCC
Confidence 999753321 0001122455666787743
No 306
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.18 E-value=3.9e-05 Score=73.08 Aligned_cols=78 Identities=17% Similarity=0.299 Sum_probs=67.9
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc-------
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
.+|+|+||+..+|..++..+..+ +..|++..|+.+++.+++++++ ..+.+..+|+.|.+++...++
T Consensus 34 ~hi~itggS~glgl~la~e~~~~--ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~ 111 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKRE--GADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEG 111 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHc--cCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccC
Confidence 58999999999999999999997 8899999999999999888775 235688899999998887766
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
.+|.+|||||.+
T Consensus 112 ~~d~l~~cAG~~ 123 (331)
T KOG1210|consen 112 PIDNLFCCAGVA 123 (331)
T ss_pred CcceEEEecCcc
Confidence 479999999865
No 307
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=98.13 E-value=1.6e-05 Score=76.55 Aligned_cols=133 Identities=20% Similarity=0.288 Sum_probs=87.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCC-ceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPD-LQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g-~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
.+.+++++|+|+ |.+|++++..|.+. + .+|++++|+.++++++++.+..... +..+. .+.+.+.++|+|||
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~--g~~~V~v~~R~~~~a~~l~~~~~~~~~-~~~~~----~~~~~~~~~DivIn 191 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDL--GVAEITIVNRTVERAEELAKLFGALGK-AELDL----ELQEELADFDLIIN 191 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhhhccc-eeecc----cchhccccCCEEEE
Confidence 356789999996 88999999999987 6 6899999999999988877642110 11111 12355678999999
Q ss_pred cCCCCCC--CchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHH
Q 014177 115 AAGPFQQ--APKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVA 187 (429)
Q Consensus 115 ~agp~~~--~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~ 187 (429)
+...-.. ....++...++..+.-.+|+...+. ..++-+.+++.|..++.| -.++..+.+..+
T Consensus 192 aTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~----~T~ll~~A~~~G~~~~~G-------~~Ml~~Qa~~~f 255 (278)
T PRK00258 192 ATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPL----PTPFLAWAKAQGARTIDG-------LGMLVHQAAEAF 255 (278)
T ss_pred CCcCCCCCCCCCCCCCHHHcCCCCEEEEeecCCC----CCHHHHHHHHCcCeecCC-------HHHHHHHHHHHH
Confidence 9842211 1111233345566667788875442 235567788888776443 245666666554
No 308
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.11 E-value=8.9e-06 Score=70.61 Aligned_cols=82 Identities=27% Similarity=0.370 Sum_probs=73.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
.++-..+|+||....|+..++.|.++ |..+++.|...++.+..++++++++-+..+|++.+++++.++. +.
T Consensus 7 ~kglvalvtggasglg~ataerlakq--gasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrl 84 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQ--GASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRL 84 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhc--CceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccce
Confidence 45667899999999999999999998 8999999999999999999999999999999999988887765 68
Q ss_pred cEEEecCCCCC
Q 014177 110 DLVVHAAGPFQ 120 (429)
Q Consensus 110 DvVi~~agp~~ 120 (429)
|+.+||||...
T Consensus 85 d~~vncagia~ 95 (260)
T KOG1199|consen 85 DALVNCAGIAY 95 (260)
T ss_pred eeeeeccceee
Confidence 99999998654
No 309
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=98.09 E-value=1.7e-05 Score=76.60 Aligned_cols=133 Identities=19% Similarity=0.181 Sum_probs=84.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcE-EEEeeCCChHHHHHHhcCccEEEe
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSE-FAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~-~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
...++|+|+|+ |.+|++++..|.+. +. +|++++|+.++++.+++.+..... ...... +++.+.+.++|+|||
T Consensus 125 ~~~k~vlIlGa-GGaaraia~aL~~~--G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~---~~~~~~~~~aDiVIn 198 (284)
T PRK12549 125 ASLERVVQLGA-GGAGAAVAHALLTL--GVERLTIFDVDPARAAALADELNARFPAARATAG---SDLAAALAAADGLVH 198 (284)
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec---cchHhhhCCCCEEEE
Confidence 45679999996 66999999999987 55 799999999999998877642211 111222 234456678999999
Q ss_pred cC--CCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHH
Q 014177 115 AA--GPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVA 187 (429)
Q Consensus 115 ~a--gp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~ 187 (429)
|. |...... .++-...+..+.-.+|+...+. ..++-..++++|..++.| -.++..+.+..+
T Consensus 199 aTp~Gm~~~~~-~~~~~~~l~~~~~v~DivY~P~----~T~ll~~A~~~G~~~~~G-------~~ML~~Qa~~~f 261 (284)
T PRK12549 199 ATPTGMAKHPG-LPLPAELLRPGLWVADIVYFPL----ETELLRAARALGCRTLDG-------GGMAVFQAVDAF 261 (284)
T ss_pred CCcCCCCCCCC-CCCCHHHcCCCcEEEEeeeCCC----CCHHHHHHHHCCCeEecC-------HHHHHHHHHHHH
Confidence 95 4322111 1222223444445677775442 235566788888776544 245566666554
No 310
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=98.08 E-value=4.3e-06 Score=78.52 Aligned_cols=71 Identities=24% Similarity=0.389 Sum_probs=57.5
Q ss_pred cCC--hHHHHHHHHHHhHcCCCceEEEEecCchh----HHHHHHHhCCCcEEEEeeCCChHHHHHHh--------cCccE
Q 014177 46 GGT--GRVGGSTAVALSKLCPDLQIVVGSRNREK----GAAMVSTLGKNSEFAEVNIYNEGSLLMAL--------RDVDL 111 (429)
Q Consensus 46 Ga~--G~iG~~l~~~L~~~~~g~~v~v~~R~~~~----~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~--------~~~Dv 111 (429)
|++ +.||+++++.|+++ |++|++.+|+.++ ++++.++.+ .+++++|++|.+++++++ .++|+
T Consensus 1 g~~~s~GiG~aia~~l~~~--Ga~V~~~~~~~~~~~~~~~~l~~~~~--~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~ 76 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEE--GANVILTDRNEEKLADALEELAKEYG--AEVIQCDLSDEESVEALFDEAVERFGGRIDI 76 (241)
T ss_dssp STSSTSHHHHHHHHHHHHT--TEEEEEEESSHHHHHHHHHHHHHHTT--SEEEESCTTSHHHHHHHHHHHHHHHCSSESE
T ss_pred CCCCCCChHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHHHcC--CceEeecCcchHHHHHHHHHHHhhcCCCeEE
Confidence 555 78999999999997 8999999999987 445555544 457999999999888774 46899
Q ss_pred EEecCCCCC
Q 014177 112 VVHAAGPFQ 120 (429)
Q Consensus 112 Vi~~agp~~ 120 (429)
+||+++...
T Consensus 77 lV~~a~~~~ 85 (241)
T PF13561_consen 77 LVNNAGISP 85 (241)
T ss_dssp EEEEEESCT
T ss_pred EEecccccc
Confidence 999997543
No 311
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=98.05 E-value=0.00012 Score=68.45 Aligned_cols=214 Identities=21% Similarity=0.253 Sum_probs=114.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHH-HHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGA-AMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~-~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++++|.|.|++|.+|+.+++.+.+. +++++..+ +|...... .-..++. .......-+.|. +.....++|++|..
T Consensus 1 ~~iki~V~Ga~GRMG~~ii~~v~~~-~~~~L~aa~~~~~~~~~g~d~ge~~-g~~~~gv~v~~~--~~~~~~~~DV~IDF 76 (266)
T COG0289 1 SMIKVAVAGASGRMGRTLIRAVLEA-PDLELVAAFDRPGSLSLGSDAGELA-GLGLLGVPVTDD--LLLVKADADVLIDF 76 (266)
T ss_pred CCceEEEEcCCChHHHHHHHHHhcC-CCceEEEEEecCCccccccchhhhc-cccccCceeecc--hhhcccCCCEEEEC
Confidence 3578999999999999999999885 67777654 55443210 0000110 111222222232 44455689999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHH-HHHhhHHHHHHcCCcEEecCCCccchh--HHHHHHHHHHHHhhcC
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQ-RAKSFKDRAIAANIPAITTGGIYPGVS--NVMAAELVRVARNESK 192 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~-~~~~~~~~a~~~g~~~i~~~g~~pG~s--~~~a~~~~~~~~~~~~ 192 (429)
..|... ...++.|.+++++.|.=+ +.+.. ....+.+.+++ ++++.+.-++.|.. .-+++.+++ ++
T Consensus 77 T~P~~~---~~~l~~~~~~~~~lVIGT--TGf~~e~~~~l~~~a~~--v~vv~a~NfSiGvnll~~l~~~aak-----~l 144 (266)
T COG0289 77 TTPEAT---LENLEFALEHGKPLVIGT--TGFTEEQLEKLREAAEK--VPVVIAPNFSLGVNLLFKLAEQAAK-----VL 144 (266)
T ss_pred CCchhh---HHHHHHHHHcCCCeEEEC--CCCCHHHHHHHHHHHhh--CCEEEeccchHHHHHHHHHHHHHHH-----hc
Confidence 887543 789999999998887322 22322 23345555444 78888877877752 222334443 34
Q ss_pred C--CCeEEEEEeeecCC-CCCCccHHH--HHHHHhCC-----ceEEeeCCeEEE-ecCCCCCeeeecCCCceeeeEEeec
Q 014177 193 G--EPERLRFSYYTAGT-GGAGPTILA--TSFLLLGE-----EVVAYNKGEEIT-LEPYSGMLSVDFGKGIGRKDVFLLN 261 (429)
Q Consensus 193 ~--~v~~i~~~~~~~G~-~~~g~~~~~--~~~~~~~~-----~~~v~~~G~~~~-v~~~~~~~~~~fp~~~g~~~~~~~~ 261 (429)
+ .++.+.. +...-- .++| +.+. -.+..... .....++|..-. .+..-....++-++=+|..++....
T Consensus 145 ~~~DiEIiE~-HHr~K~DAPSG-TAl~lae~ia~~~~~~~~~~~v~~r~G~~g~r~~~~Igi~svR~G~ivG~H~V~F~~ 222 (266)
T COG0289 145 DDYDIEIIEA-HHRHKKDAPSG-TALKLAEAIAEARGQDLKDEAVYGREGATGARKEGEIGIHSVRGGDIVGEHEVIFAG 222 (266)
T ss_pred CCCCEEehhh-hcccCCCCCcH-HHHHHHHHHHHhhccccccceeecccCCcCCCCCCCceeEEeecCCcceeEEEEEec
Confidence 4 4555554 211110 1122 1211 12222211 122234552211 1111223456666667888888776
Q ss_pred Cchhhhhh
Q 014177 262 LPEVRSAR 269 (429)
Q Consensus 262 ~~e~~tl~ 269 (429)
.+|..++.
T Consensus 223 ~GE~iei~ 230 (266)
T COG0289 223 EGERIEIR 230 (266)
T ss_pred CCcEEEEE
Confidence 66655543
No 312
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.04 E-value=6.3e-05 Score=90.89 Aligned_cols=82 Identities=23% Similarity=0.394 Sum_probs=62.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-----------------------------------------
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE----------------------------------------- 76 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~----------------------------------------- 76 (429)
+++.+|||||++.||..+++.|++++ +.+|++.+|+..
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~-ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~ 2074 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQC-QAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVR 2074 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhc-CCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccc
Confidence 46899999999999999999999873 589999999820
Q ss_pred ------hHHHHH---HHhCCCcEEEEeeCCChHHHHHHhc------CccEEEecCCCCC
Q 014177 77 ------KGAAMV---STLGKNSEFAEVNIYNEGSLLMALR------DVDLVVHAAGPFQ 120 (429)
Q Consensus 77 ------~~~~l~---~~l~~~v~~~~~Dl~d~~~l~~~~~------~~DvVi~~agp~~ 120 (429)
..++.. +..+.++.++.+|++|.+++.++++ ++|.|||+||...
T Consensus 2075 ~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~ 2133 (2582)
T TIGR02813 2075 PVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLA 2133 (2582)
T ss_pred ccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCC
Confidence 000111 1223467889999999998887765 4899999998643
No 313
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=97.99 E-value=1.6e-05 Score=79.00 Aligned_cols=100 Identities=18% Similarity=0.204 Sum_probs=64.8
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEE-EeeCCChHHHHHHhcCccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFA-EVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~-~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
++|.|+||+|++|..+++.|.+ +|.++++ +++++....+.+.+..+ .+... ..++.+.+ .+++.+++|+||.|++
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~-hP~~el~~l~~s~~sagk~~~~~~~-~l~~~~~~~~~~~~-~~~~~~~~DvVf~alP 77 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLN-HPEVEITYLVSSRESAGKPVSEVHP-HLRGLVDLNLEPID-EEEIAEDADVVFLALP 77 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHc-CCCceEEEEeccchhcCCChHHhCc-cccccCCceeecCC-HHHhhcCCCEEEECCC
Confidence 4799999999999999999987 5888888 44544433333332222 11111 11222111 2334458999998875
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
... ...++..+.+.|++.||++++.
T Consensus 78 ~~~---s~~~~~~~~~~G~~VIDlS~~f 102 (346)
T TIGR01850 78 HGV---SAELAPELLAAGVKVIDLSADF 102 (346)
T ss_pred chH---HHHHHHHHHhCCCEEEeCChhh
Confidence 322 2678888889999999998754
No 314
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=97.98 E-value=5.2e-05 Score=73.08 Aligned_cols=149 Identities=15% Similarity=0.091 Sum_probs=87.8
Q ss_pred ccccCCccCCC-------CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCC
Q 014177 26 TVLDGAHFQMK-------NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYN 98 (429)
Q Consensus 26 ~~~~~~~~~~~-------~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d 98 (429)
-+||+..|... ..+++++|+|+ |..+++++..|.+.+ -.+|++++|+.++++++++.+............+
T Consensus 107 ~NTD~~Gf~~~L~~~~~~~~~k~vlilGa-GGaarAi~~aL~~~g-~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~ 184 (283)
T PRK14027 107 HNTDVSGFGRGMEEGLPNAKLDSVVQVGA-GGVGNAVAYALVTHG-VQKLQVADLDTSRAQALADVINNAVGREAVVGVD 184 (283)
T ss_pred EcCCHHHHHHHHHhcCcCcCCCeEEEECC-cHHHHHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHhhccCcceEEecC
Confidence 46666555332 34578999996 669999999999862 2489999999999999987663211110111122
Q ss_pred hHHHHHHhcCccEEEecCCCCCC-CchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhH
Q 014177 99 EGSLLMALRDVDLVVHAAGPFQQ-APKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSN 177 (429)
Q Consensus 99 ~~~l~~~~~~~DvVi~~agp~~~-~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~ 177 (429)
...+.+.+.++|+|||+...-.. ....++-...+..+.-.+|+...+ ...++-..+++.|..++.| -.
T Consensus 185 ~~~~~~~~~~~divINaTp~Gm~~~~~~~~~~~~l~~~~~v~D~vY~P----~~T~ll~~A~~~G~~~~~G-------l~ 253 (283)
T PRK14027 185 ARGIEDVIAAADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVYMP----IETELLKAARALGCETLDG-------TR 253 (283)
T ss_pred HhHHHHHHhhcCEEEEcCCCCCCCCCCCCCCHHHcCCCcEEEEcccCC----CCCHHHHHHHHCCCEEEcc-------HH
Confidence 22333445679999999742211 000122122333444456766443 2235566788888776544 24
Q ss_pred HHHHHHHHHH
Q 014177 178 VMAAELVRVA 187 (429)
Q Consensus 178 ~~a~~~~~~~ 187 (429)
++..+.+..+
T Consensus 254 MLv~Qa~~~f 263 (283)
T PRK14027 254 MAIHQAVDAF 263 (283)
T ss_pred HHHHHHHHHH
Confidence 5566666554
No 315
>PRK13303 L-aspartate dehydrogenase; Provisional
Probab=97.97 E-value=0.00018 Score=68.84 Aligned_cols=126 Identities=17% Similarity=0.177 Sum_probs=80.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
|+||.|+|+ |.+|+.+++.|.+. ++.++..+.......+...+.+...+. . ..|.+.+ -.++|+|+-|+++
T Consensus 1 m~rVgIiG~-G~iG~~~~~~l~~~-~~~~l~~v~~~~~~~~~~~~~~~~~~~-~---~~d~~~l---~~~~DvVve~t~~ 71 (265)
T PRK13303 1 MMKVAMIGF-GAIGAAVLELLEHD-PDLRVDWVIVPEHSIDAVRRALGEAVR-V---VSSVDAL---PQRPDLVVECAGH 71 (265)
T ss_pred CcEEEEECC-CHHHHHHHHHHhhC-CCceEEEEEEcCCCHHHHhhhhccCCe-e---eCCHHHh---ccCCCEEEECCCH
Confidence 469999995 99999999999874 567766554322222222222211111 1 1233333 3479999999986
Q ss_pred CCCCchHHHHHHHHHcCCcEEEeCCChh-HHHHHHhhHHHHHHcCCcEEecCCCccchh
Q 014177 119 FQQAPKCTVLEAAIETKTAYIDVCDDTI-YSQRAKSFKDRAIAANIPAITTGGIYPGVS 176 (429)
Q Consensus 119 ~~~~~~~~v~~aa~~~gv~~vdis~~~~-~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s 176 (429)
... ......|+++|+|.+..+...- -......+.+.++++|..+.+.+|+..|..
T Consensus 72 ~~~---~e~~~~aL~aGk~Vvi~s~~Al~d~~~~~~L~~~A~~~g~~l~v~sga~gg~d 127 (265)
T PRK13303 72 AAL---KEHVVPILKAGIDCAVISVGALADEALRERLEQAAEAGGARLHLLSGAIGGID 127 (265)
T ss_pred HHH---HHHHHHHHHcCCCEEEeChHHhcCHHHHHHHHHHHHHCCCEEEEeChHhhCHH
Confidence 533 5788999999999986553210 011223566778889999888888776643
No 316
>TIGR00036 dapB dihydrodipicolinate reductase.
Probab=97.95 E-value=7.6e-05 Score=71.43 Aligned_cols=127 Identities=20% Similarity=0.174 Sum_probs=82.6
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEE-EecCc-hhH-HHHHHHhC-CCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVV-GSRNR-EKG-AAMVSTLG-KNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v-~~R~~-~~~-~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++|.|+|++|.+|+.+++.+.+. ++++++. ++|+. ++. +...+..+ ....... ..|.+.+ ..++|+||.+
T Consensus 2 ikV~IiGa~G~MG~~i~~~i~~~-~~~elvav~d~~~~~~~~~~~~~~~~~~~~gv~~--~~d~~~l---~~~~DvVIdf 75 (266)
T TIGR00036 2 IKVAVAGAAGRMGRELIKAALAA-EGLQLVAAFERHGSSLQGTDAGELAGIGKVGVPV--TDDLEAV---ETDPDVLIDF 75 (266)
T ss_pred eEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCCccccCCCHHHhcCcCcCCcee--eCCHHHh---cCCCCEEEEC
Confidence 68999999999999999999874 6888776 45432 221 11111111 0001111 1333333 3579999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchh
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVS 176 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s 176 (429)
..|... ...++.|+++|++.|.-+... .......+.+.++++|++++.+..++.|..
T Consensus 76 T~p~~~---~~~~~~al~~g~~vVigttg~-~~e~~~~l~~aA~~~g~~v~~a~NfSlGv~ 132 (266)
T TIGR00036 76 TTPEGV---LNHLKFALEHGVRLVVGTTGF-SEEDKQELADLAEKAGIAAVIAPNFSIGVN 132 (266)
T ss_pred CChHHH---HHHHHHHHHCCCCEEEECCCC-CHHHHHHHHHHHhcCCccEEEECcccHHHH
Confidence 876543 688999999999998644211 112344667777888999999888888864
No 317
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=97.95 E-value=2.7e-05 Score=76.97 Aligned_cols=96 Identities=20% Similarity=0.218 Sum_probs=67.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHc-CCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKL-CPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~-~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
+++|+|+||+|++|+.+++.|.++ +|..++..+.++.+..+.+. +. ..+....|+.+. .++++|+||-|+|
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~--~~-g~~i~v~d~~~~-----~~~~vDvVf~A~g 72 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS--FK-GKELKVEDLTTF-----DFSGVDIALFSAG 72 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee--eC-CceeEEeeCCHH-----HHcCCCEEEECCC
Confidence 468999999999999999999886 34556777776654433332 21 234455566432 2368999999886
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
.... ..++....+.|+..||++++.
T Consensus 73 ~g~s---~~~~~~~~~~G~~VIDlS~~~ 97 (334)
T PRK14874 73 GSVS---KKYAPKAAAAGAVVIDNSSAF 97 (334)
T ss_pred hHHH---HHHHHHHHhCCCEEEECCchh
Confidence 5432 577777888999899998753
No 318
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.92 E-value=0.00011 Score=70.60 Aligned_cols=131 Identities=18% Similarity=0.277 Sum_probs=84.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
.+++++|+|+ |.+|+.++..|.+. +.+|++.+|+.++++.+.+.+...-.....+..+ ....++|+||||.+
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~--g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~-----~~~~~~DivInatp 187 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKA--DCNVIIANRTVSKAEELAERFQRYGEIQAFSMDE-----LPLHRVDLIINATS 187 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhhcCceEEechhh-----hcccCccEEEECCC
Confidence 4678999997 77999999999986 6799999999999888877654211111122211 12357999999985
Q ss_pred CCCC--CchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHH
Q 014177 118 PFQQ--APKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVA 187 (429)
Q Consensus 118 p~~~--~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~ 187 (429)
.... ....++....++.+.-.+|++..+... .+.+.+++.|..++.| -.++..+....+
T Consensus 188 ~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~T----~ll~~A~~~G~~~vdG-------~~Ml~~Qa~~~f 248 (270)
T TIGR00507 188 AGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGET----PFLAEAKSLGTKTIDG-------LGMLVAQAALAF 248 (270)
T ss_pred CCCCCCCCCCCCCHHHcCCCCEEEEeccCCCCC----HHHHHHHHCCCeeeCC-------HHHHHHHHHHHH
Confidence 4211 100122233456677778988655322 4567788888776544 245566666554
No 319
>PRK09620 hypothetical protein; Provisional
Probab=97.92 E-value=1.7e-05 Score=74.05 Aligned_cols=80 Identities=18% Similarity=0.127 Sum_probs=54.1
Q ss_pred CCCCeEEEEcCC----------------hHHHHHHHHHHhHcCCCceEEEEecCchh-HHHHHHHhCCCcEEEEeeCCCh
Q 014177 37 NRNARVLVLGGT----------------GRVGGSTAVALSKLCPDLQIVVGSRNREK-GAAMVSTLGKNSEFAEVNIYNE 99 (429)
Q Consensus 37 ~~~~~VlV~Ga~----------------G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-~~~l~~~l~~~v~~~~~Dl~d~ 99 (429)
|.+++||||+|. ||+|+++++.|.++ |++|+++++.... ...+.. ......+..|....
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~--Ga~V~li~g~~~~~~~~~~~--~~~~~~V~s~~d~~ 76 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISK--GAHVIYLHGYFAEKPNDINN--QLELHPFEGIIDLQ 76 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHC--CCeEEEEeCCCcCCCcccCC--ceeEEEEecHHHHH
Confidence 467899999886 99999999999998 8999988753221 110000 01123344433334
Q ss_pred HHHHHHhc--CccEEEecCCCCC
Q 014177 100 GSLLMALR--DVDLVVHAAGPFQ 120 (429)
Q Consensus 100 ~~l~~~~~--~~DvVi~~agp~~ 120 (429)
+.+.+++. ++|+|||+|+...
T Consensus 77 ~~l~~~~~~~~~D~VIH~AAvsD 99 (229)
T PRK09620 77 DKMKSIITHEKVDAVIMAAAGSD 99 (229)
T ss_pred HHHHHHhcccCCCEEEECccccc
Confidence 66777774 6999999998743
No 320
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.92 E-value=9.8e-05 Score=71.38 Aligned_cols=114 Identities=22% Similarity=0.304 Sum_probs=76.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++.+++++|+| +|.+|+.+++.|... |.+|++.+|+.++.+...+ . .... . +.+++.+.++++|+|||+
T Consensus 148 ~l~gk~v~IiG-~G~iG~avA~~L~~~--G~~V~v~~R~~~~~~~~~~-~--g~~~--~---~~~~l~~~l~~aDiVint 216 (287)
T TIGR02853 148 TIHGSNVMVLG-FGRTGMTIARTFSAL--GARVFVGARSSADLARITE-M--GLIP--F---PLNKLEEKVAEIDIVINT 216 (287)
T ss_pred CCCCCEEEEEc-ChHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH-C--CCee--e---cHHHHHHHhccCCEEEEC
Confidence 57789999999 588999999999987 7899999999877655432 1 1221 1 234577788899999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEec
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITT 168 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~ 168 (429)
.+.. ... ...++. .+.+.-.+|+++.+.- ..+ +.+++.|+..+..
T Consensus 217 ~P~~-ii~-~~~l~~-~k~~aliIDlas~Pg~----tdf-~~Ak~~G~~a~~~ 261 (287)
T TIGR02853 217 IPAL-VLT-ADVLSK-LPKHAVIIDLASKPGG----TDF-EYAKKRGIKALLA 261 (287)
T ss_pred CChH-HhC-HHHHhc-CCCCeEEEEeCcCCCC----CCH-HHHHHCCCEEEEe
Confidence 7422 111 233322 2445667888875521 134 5667788877643
No 321
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=97.90 E-value=6.2e-05 Score=74.75 Aligned_cols=79 Identities=16% Similarity=0.144 Sum_probs=59.1
Q ss_pred CCCeEEEEcCChHHHHH--HHHHHhHcCCCceEEEEecCchh---------------HHHHHHHhCCCcEEEEeeCCChH
Q 014177 38 RNARVLVLGGTGRVGGS--TAVALSKLCPDLQIVVGSRNREK---------------GAAMVSTLGKNSEFAEVNIYNEG 100 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~--l~~~L~~~~~g~~v~v~~R~~~~---------------~~~l~~~l~~~v~~~~~Dl~d~~ 100 (429)
.+|++||+|+++.+|.+ +++.| +. |+.+++.++..++ .++..+..+..+..+.+|+++.+
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~--GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GA--GADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-Hc--CCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence 46899999999999999 89999 76 8888888753321 22233333334667899999988
Q ss_pred HHHHHhc-------CccEEEecCCCC
Q 014177 101 SLLMALR-------DVDLVVHAAGPF 119 (429)
Q Consensus 101 ~l~~~~~-------~~DvVi~~agp~ 119 (429)
+++++++ ++|++||+++..
T Consensus 117 ~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 117 IKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCccC
Confidence 8777654 689999999743
No 322
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=97.89 E-value=4.6e-05 Score=66.58 Aligned_cols=100 Identities=20% Similarity=0.114 Sum_probs=70.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
|++|..+|+||+|.+|+.+.+.+++...-.+|++..|+...-.+ ...++....+|.+..+++....+++|+.+.|.
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a----t~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaL 91 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA----TDKVVAQVEVDFSKLSQLATNEQGPDVLFCAL 91 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc----ccceeeeEEechHHHHHHHhhhcCCceEEEee
Confidence 67899999999999999999999997433488888887421111 11346667788887777878888999999988
Q ss_pred CCCCCC------------chHHHHHHHHHcCCcEEE
Q 014177 117 GPFQQA------------PKCTVLEAAIETKTAYID 140 (429)
Q Consensus 117 gp~~~~------------~~~~v~~aa~~~gv~~vd 140 (429)
|..... .....+++|.+.||+.+.
T Consensus 92 gTTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fv 127 (238)
T KOG4039|consen 92 GTTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFV 127 (238)
T ss_pred cccccccccCceEeechHHHHHHHHHHHhCCCeEEE
Confidence 754220 123445556666665543
No 323
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.89 E-value=1.5e-05 Score=78.41 Aligned_cols=82 Identities=17% Similarity=0.087 Sum_probs=53.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcC-----CCceEEEEecCch--hHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLC-----PDLQIVVGSRNRE--KGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDL 111 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~-----~g~~v~v~~R~~~--~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~Dv 111 (429)
+.+|+|+||+|++|+.++..|..++ .+.++++.|++.. +++...-++.+-......|+.+..++.+.++++|+
T Consensus 2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDi 81 (325)
T cd01336 2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDV 81 (325)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCCE
Confidence 4689999999999999999998742 1348999999653 23221111110000112244434556778899999
Q ss_pred EEecCCCCC
Q 014177 112 VVHAAGPFQ 120 (429)
Q Consensus 112 Vi~~agp~~ 120 (429)
|||+||...
T Consensus 82 VI~tAG~~~ 90 (325)
T cd01336 82 AILVGAMPR 90 (325)
T ss_pred EEEeCCcCC
Confidence 999998654
No 324
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.88 E-value=3.2e-05 Score=76.24 Aligned_cols=97 Identities=20% Similarity=0.252 Sum_probs=64.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHc-CCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKL-CPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~-~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+|++|.|+||||++|+.+++.|.++ +|..++..+..+....+.+. +.+ ...++.+.+.. + ++++|+||-++
T Consensus 3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~--~~~----~~l~~~~~~~~-~-~~~vD~vFla~ 74 (336)
T PRK05671 3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVP--FAG----KNLRVREVDSF-D-FSQVQLAFFAA 74 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeec--cCC----cceEEeeCChH-H-hcCCCEEEEcC
Confidence 4479999999999999999999963 45556655543322221111 111 23444333322 2 47899999887
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
+... ...++..+.++|+..||.|++.
T Consensus 75 p~~~---s~~~v~~~~~~G~~VIDlS~~f 100 (336)
T PRK05671 75 GAAV---SRSFAEKARAAGCSVIDLSGAL 100 (336)
T ss_pred CHHH---HHHHHHHHHHCCCeEEECchhh
Confidence 6322 2578888889999999999765
No 325
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.88 E-value=0.0001 Score=67.63 Aligned_cols=104 Identities=21% Similarity=0.340 Sum_probs=72.3
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCc-------------------hhHHHHHHHh---CCCc
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNR-------------------EKGAAMVSTL---GKNS 89 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~-------------------~~~~~l~~~l---~~~v 89 (429)
.++.++.++|+|+|+ |.+|+.+++.|+.. |. +++++|.+. .|.+.+++.+ .+.+
T Consensus 15 ~q~kl~~~~VlviG~-GglGs~ia~~La~~--Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v 91 (202)
T TIGR02356 15 GQQRLLNSHVLIIGA-GGLGSPAALYLAGA--GVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDI 91 (202)
T ss_pred HHHHhcCCCEEEECC-CHHHHHHHHHHHHc--CCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCC
Confidence 456688899999995 66999999999997 44 899998762 2333333333 2333
Q ss_pred EE--EEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 90 EF--AEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 90 ~~--~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
++ ...++. .+.+.++++++|+||.|...... ...+-+.|.+.++++|+.+
T Consensus 92 ~i~~~~~~i~-~~~~~~~~~~~D~Vi~~~d~~~~--r~~l~~~~~~~~ip~i~~~ 143 (202)
T TIGR02356 92 QVTALKERVT-AENLELLINNVDLVLDCTDNFAT--RYLINDACVALGTPLISAA 143 (202)
T ss_pred EEEEehhcCC-HHHHHHHHhCCCEEEECCCCHHH--HHHHHHHHHHcCCCEEEEE
Confidence 33 333343 35577788999999999864432 2456788999999998765
No 326
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=97.86 E-value=6.4e-05 Score=74.33 Aligned_cols=107 Identities=21% Similarity=0.317 Sum_probs=76.2
Q ss_pred CCccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCc---------------------hhHHHHHHH---
Q 014177 30 GAHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNR---------------------EKGAAMVST--- 84 (429)
Q Consensus 30 ~~~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~---------------------~~~~~l~~~--- 84 (429)
+...++.++.++|+|+|+ |.+|+.+++.|+.. |+ +++++|++. .|++.+++.
T Consensus 15 G~~~Q~~L~~~~VlIiG~-GglGs~va~~La~a--Gvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~ 91 (338)
T PRK12475 15 GEEGQRKIREKHVLIVGA-GALGAANAEALVRA--GIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRK 91 (338)
T ss_pred CHHHHHhhcCCcEEEECC-CHHHHHHHHHHHHc--CCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHH
Confidence 344567788999999996 66999999999997 55 899999874 233333332
Q ss_pred hCCC--cEEEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 85 LGKN--SEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 85 l~~~--v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
+.+. ++.+..|++ .+.++++++++|+||.|...+.. ..-+-+.|.+.++++|..+
T Consensus 92 inp~v~i~~~~~~~~-~~~~~~~~~~~DlVid~~D~~~~--r~~in~~~~~~~ip~i~~~ 148 (338)
T PRK12475 92 INSEVEIVPVVTDVT-VEELEELVKEVDLIIDATDNFDT--RLLINDLSQKYNIPWIYGG 148 (338)
T ss_pred HCCCcEEEEEeccCC-HHHHHHHhcCCCEEEEcCCCHHH--HHHHHHHHHHcCCCEEEEE
Confidence 2233 445556665 35678888999999999875432 2445678999999988654
No 327
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.86 E-value=0.00015 Score=69.98 Aligned_cols=134 Identities=18% Similarity=0.162 Sum_probs=83.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+.+++++|+|+ |..|++++..|.+. |. +|++++|+.++++++++.+........ +...+++...+.++|+||||
T Consensus 123 ~~~k~vlvlGa-GGaarai~~aL~~~--G~~~i~I~nRt~~ka~~La~~~~~~~~~~~--~~~~~~~~~~~~~~DiVIna 197 (282)
T TIGR01809 123 LAGFRGLVIGA-GGTSRAAVYALASL--GVTDITVINRNPDKLSRLVDLGVQVGVITR--LEGDSGGLAIEKAAEVLVST 197 (282)
T ss_pred cCCceEEEEcC-cHHHHHHHHHHHHc--CCCeEEEEeCCHHHHHHHHHHhhhcCccee--ccchhhhhhcccCCCEEEEC
Confidence 45689999996 66999999999987 54 799999999999999887642212111 22223344556789999999
Q ss_pred CCCCCCCchHHHHHHH--------HHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHH
Q 014177 116 AGPFQQAPKCTVLEAA--------IETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVA 187 (429)
Q Consensus 116 agp~~~~~~~~v~~aa--------~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~ 187 (429)
........ ...+..+ ...+.-.+|+...+ ...++-..++++|..++.| + .++..+.+..+
T Consensus 198 Tp~g~~~~-~~~l~~~~~~~~~~~~~~~~~v~D~vY~P----~~T~ll~~A~~~G~~~~~G------l-~MLv~Qa~~~f 265 (282)
T TIGR01809 198 VPADVPAD-YVDLFATVPFLLLKRKSSEGIFLDAAYDP----WPTPLVAIVSAAGWRVISG------L-QMLLHQGFAQF 265 (282)
T ss_pred CCCCCCCC-HHHhhhhhhhhccccCCCCcEEEEEeeCC----CCCHHHHHHHHCCCEEECc------H-HHHHHHHHHHH
Confidence 85322211 1222211 11233456766433 2235566778888776544 2 44556665544
No 328
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.85 E-value=0.00011 Score=75.72 Aligned_cols=93 Identities=23% Similarity=0.231 Sum_probs=67.8
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-hhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-EKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
++++++|+|+|+++ +|..+++.|+++ |++|++.+++. +.+++..+++. ..++++..|..+ +...++|+||
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~--G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv 73 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKL--GAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFLEGVDLVV 73 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEE
Confidence 36679999999766 999999999998 89999999875 33433333332 246677777765 2356899999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCcEE
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTAYI 139 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~~v 139 (429)
+++|.... .+.+.+|.+.|++.+
T Consensus 74 ~~~g~~~~---~~~~~~a~~~~i~~~ 96 (450)
T PRK14106 74 VSPGVPLD---SPPVVQAHKKGIEVI 96 (450)
T ss_pred ECCCCCCC---CHHHHHHHHCCCcEE
Confidence 99986543 467777777776544
No 329
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=97.85 E-value=3.7e-05 Score=77.93 Aligned_cols=165 Identities=17% Similarity=0.167 Sum_probs=98.0
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCch---hHHHHHH------------HhC---CCcEEEEee
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNRE---KGAAMVS------------TLG---KNSEFAEVN 95 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~---~~~~l~~------------~l~---~~v~~~~~D 95 (429)
+.+++|+|+||||+||+|+.+++.|++..|+. .+.+.-|... .-+++.. ..+ .++..+.+|
T Consensus 8 ~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GD 87 (467)
T KOG1221|consen 8 QFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGD 87 (467)
T ss_pred HHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccc
Confidence 34688999999999999999999999887665 5555555432 1112211 111 356778888
Q ss_pred CCChH------HHHHHhcCccEEEecCCCCCC------------CchHHHHHHHHHcCC--cEEEeCCChh---------
Q 014177 96 IYNEG------SLLMALRDVDLVVHAAGPFQQ------------APKCTVLEAAIETKT--AYIDVCDDTI--------- 146 (429)
Q Consensus 96 l~d~~------~l~~~~~~~DvVi~~agp~~~------------~~~~~v~~aa~~~gv--~~vdis~~~~--------- 146 (429)
+.+++ .++.+.+.+|+|||+|+.... .|+.++++.|.+..- -++.+|+...
T Consensus 88 i~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E 167 (467)
T KOG1221|consen 88 ISEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEE 167 (467)
T ss_pred ccCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccc
Confidence 87543 455567799999999975322 367788888876532 2333332110
Q ss_pred --H-----------HHHHHhhHHHHHHcCC-cEEecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEE
Q 014177 147 --Y-----------SQRAKSFKDRAIAANI-PAITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFS 201 (429)
Q Consensus 147 --~-----------~~~~~~~~~~a~~~g~-~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~ 201 (429)
| ......+++.....-. ..+.+-...|-.+|.+++.++...+ ...++..+|.+
T Consensus 168 ~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~--~~lPivIiRPs 234 (467)
T KOG1221|consen 168 KPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA--ENLPLVIIRPS 234 (467)
T ss_pred cccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc--cCCCeEEEcCC
Confidence 0 0000011111111111 1222223448899999999998765 35567777754
No 330
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=97.84 E-value=0.00015 Score=67.54 Aligned_cols=96 Identities=25% Similarity=0.330 Sum_probs=73.2
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHH-HhCCCcEEEEeeCCChHHHHHH-hcCccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVS-TLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~-~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~ag 117 (429)
|+++|+| .|.+|+.+|+.|.+. |++|++.++++++.++... .+ ....+.+|.+|.+.|+++ +.++|+++-+.+
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~--g~~Vv~Id~d~~~~~~~~~~~~--~~~~v~gd~t~~~~L~~agi~~aD~vva~t~ 75 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEE--GHNVVLIDRDEERVEEFLADEL--DTHVVIGDATDEDVLEEAGIDDADAVVAATG 75 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhC--CCceEEEEcCHHHHHHHhhhhc--ceEEEEecCCCHHHHHhcCCCcCCEEEEeeC
Confidence 6899999 599999999999997 8999999999999887443 33 367899999999999988 779999998876
Q ss_pred CCCCCchHHHHHHHH-HcCCcEEEeC
Q 014177 118 PFQQAPKCTVLEAAI-ETKTAYIDVC 142 (429)
Q Consensus 118 p~~~~~~~~v~~aa~-~~gv~~vdis 142 (429)
--.. +.-+...+. +.|++++-.-
T Consensus 76 ~d~~--N~i~~~la~~~~gv~~viar 99 (225)
T COG0569 76 NDEV--NSVLALLALKEFGVPRVIAR 99 (225)
T ss_pred CCHH--HHHHHHHHHHhcCCCcEEEE
Confidence 3221 122233333 3688887543
No 331
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=97.83 E-value=0.0002 Score=65.16 Aligned_cols=139 Identities=19% Similarity=0.259 Sum_probs=93.4
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCce-EEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQ-IVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~-v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
++|.++| +|.||..+++.+.+---+++ +.+.||+.+++.++.+.++.+ +.++ +++++.+.|+++-||++
T Consensus 1 l~vgiVG-cGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~~------~~s~---ide~~~~~DlvVEaAS~ 70 (255)
T COG1712 1 LKVGIVG-CGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVGRR------CVSD---IDELIAEVDLVVEAASP 70 (255)
T ss_pred CeEEEEe-ccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhcCCC------cccc---HHHHhhccceeeeeCCH
Confidence 4689999 79999999999876211344 566799999998887765432 2233 45566899999999986
Q ss_pred CCCCchHHHHHHHHHcCCcEEEeCCChhHH-HHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCCeE
Q 014177 119 FQQAPKCTVLEAAIETKTAYIDVCDDTIYS-QRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPER 197 (429)
Q Consensus 119 ~~~~~~~~v~~aa~~~gv~~vdis~~~~~~-~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~ 197 (429)
-.. ......++++|++++.+|-..=.- .....+.+.++..|..+..-+|..-|+.-+.+.. ...++.
T Consensus 71 ~Av---~e~~~~~L~~g~d~iV~SVGALad~~l~erl~~lak~~~~rv~~pSGAiGGlD~l~aar---------~g~i~~ 138 (255)
T COG1712 71 EAV---REYVPKILKAGIDVIVMSVGALADEGLRERLRELAKCGGARVYLPSGAIGGLDALAAAR---------VGGIEE 138 (255)
T ss_pred HHH---HHHhHHHHhcCCCEEEEechhccChHHHHHHHHHHhcCCcEEEecCccchhHHHHHHhh---------cCCeeE
Confidence 433 456677889999999877432110 1122445567777888877777777765544332 235677
Q ss_pred EEE
Q 014177 198 LRF 200 (429)
Q Consensus 198 i~~ 200 (429)
+++
T Consensus 139 V~l 141 (255)
T COG1712 139 VVL 141 (255)
T ss_pred EEE
Confidence 776
No 332
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.82 E-value=6.3e-05 Score=74.90 Aligned_cols=101 Identities=18% Similarity=0.156 Sum_probs=64.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHH-hC--------CCcEEEEeeCCChHHHHHHhc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVST-LG--------KNSEFAEVNIYNEGSLLMALR 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~-l~--------~~v~~~~~Dl~d~~~l~~~~~ 107 (429)
|++++|.|+||+|++|+.+++.|.+ ++..+++.+.++.....+.... .+ ....-..+...+.+. +.
T Consensus 1 ~~~~~V~I~GatG~iG~~l~~~L~~-~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~ 75 (349)
T PRK08664 1 MMKLKVGILGATGMVGQRFVQLLAN-HPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTDPEA----VD 75 (349)
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHc-CCCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCCHHH----hc
Confidence 4568999999999999999999987 5778988875554332211110 00 000111222223332 35
Q ss_pred CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 108 DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 108 ~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
++|+|+-|++... ...+++.+.+.|++.||.+++.
T Consensus 76 ~~DvVf~a~p~~~---s~~~~~~~~~~G~~vIDls~~f 110 (349)
T PRK08664 76 DVDIVFSALPSDV---AGEVEEEFAKAGKPVFSNASAH 110 (349)
T ss_pred CCCEEEEeCChhH---HHHHHHHHHHCCCEEEECCchh
Confidence 8999998764322 1466788888999999999753
No 333
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=97.80 E-value=8.8e-05 Score=68.47 Aligned_cols=100 Identities=18% Similarity=0.191 Sum_probs=73.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCC---ceEEEEecCchhHHHHHHHhC---C----CcEEEEeeCCChHHHHHHhc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPD---LQIVVGSRNREKGAAMVSTLG---K----NSEFAEVNIYNEGSLLMALR 107 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g---~~v~v~~R~~~~~~~l~~~l~---~----~v~~~~~Dl~d~~~l~~~~~ 107 (429)
+.|.++|+|+...+|-++|.+|++.... ..+++.+|+.+++++..+.+. + .++++++|+++-+++..+.+
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~ 81 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK 81 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence 4577999999999999999999885322 457788999999887665442 2 47889999999887776654
Q ss_pred -------CccEEEecCCCCCCCchHHHHHHHHHcCCcE
Q 014177 108 -------DVDLVVHAAGPFQQAPKCTVLEAAIETKTAY 138 (429)
Q Consensus 108 -------~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~ 138 (429)
..|.|+-+||.....| .+...+....-.+-
T Consensus 82 di~~rf~~ld~iylNAg~~~~~g-i~w~~avf~~fsnp 118 (341)
T KOG1478|consen 82 DIKQRFQRLDYIYLNAGIMPNPG-INWKAAVFGLFSNP 118 (341)
T ss_pred HHHHHhhhccEEEEccccCCCCc-ccHHHHHHHHhhch
Confidence 6899999998765544 45555544443333
No 334
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.79 E-value=3.4e-05 Score=75.11 Aligned_cols=37 Identities=22% Similarity=0.180 Sum_probs=31.6
Q ss_pred CCCCCeEEEEcCC--hHHHHHHHHHHhHcCCCceEEEEecC
Q 014177 36 KNRNARVLVLGGT--GRVGGSTAVALSKLCPDLQIVVGSRN 74 (429)
Q Consensus 36 ~~~~~~VlV~Ga~--G~iG~~l~~~L~~~~~g~~v~v~~R~ 74 (429)
++.+|.++|||++ ..||+++++.|+++ |++|++.++.
T Consensus 5 ~~~gk~alITGa~~~~GIG~a~A~~la~~--Ga~Vvv~~~~ 43 (299)
T PRK06300 5 DLTGKIAFIAGIGDDQGYGWGIAKALAEA--GATILVGTWV 43 (299)
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHHC--CCEEEEEecc
Confidence 4678999999984 56999999999998 8999997654
No 335
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=97.79 E-value=0.0001 Score=73.84 Aligned_cols=101 Identities=22% Similarity=0.334 Sum_probs=74.8
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
-.++..+++||+| +|-+|.-+++.|.+++ -.+|++++|+.++++.++++++ +++...+.+...+..+|+||
T Consensus 173 ~~~L~~~~vlvIG-AGem~~lva~~L~~~g-~~~i~IaNRT~erA~~La~~~~-------~~~~~l~el~~~l~~~DvVi 243 (414)
T COG0373 173 FGSLKDKKVLVIG-AGEMGELVAKHLAEKG-VKKITIANRTLERAEELAKKLG-------AEAVALEELLEALAEADVVI 243 (414)
T ss_pred hcccccCeEEEEc-ccHHHHHHHHHHHhCC-CCEEEEEcCCHHHHHHHHHHhC-------CeeecHHHHHHhhhhCCEEE
Confidence 3447889999999 5999999999999973 2689999999999999998875 33344566788889999999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCc--EEEeCC
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTA--YIDVCD 143 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~--~vdis~ 143 (429)
.+.+-.+..-+...++.+.+...+ .||++-
T Consensus 244 ssTsa~~~ii~~~~ve~a~~~r~~~livDiav 275 (414)
T COG0373 244 SSTSAPHPIITREMVERALKIRKRLLIVDIAV 275 (414)
T ss_pred EecCCCccccCHHHHHHHHhcccCeEEEEecC
Confidence 997643322124556666555444 467764
No 336
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.76 E-value=0.00019 Score=68.92 Aligned_cols=133 Identities=19% Similarity=0.228 Sum_probs=83.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCC-ceEEEEecCchhHHHHHHHhCCCcEEE-EeeCCChHHHHHHhcCccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPD-LQIVVGSRNREKGAAMVSTLGKNSEFA-EVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g-~~v~v~~R~~~~~~~l~~~l~~~v~~~-~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
.+++++|+|+ |..+++++..|++. | .+|+++.|+.++++++++.++.....+ ..+..+.+... ..|+|||+
T Consensus 125 ~~~~vlilGA-GGAarAv~~aL~~~--g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~----~~dliINa 197 (283)
T COG0169 125 TGKRVLILGA-GGAARAVAFALAEA--GAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE----EADLLINA 197 (283)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc----ccCEEEEC
Confidence 4588999996 55999999999997 5 589999999999999998876332222 22232222111 69999999
Q ss_pred CCCCCCC--chHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHH
Q 014177 116 AGPFQQA--PKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVAR 188 (429)
Q Consensus 116 agp~~~~--~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~ 188 (429)
....... +...+-..++..+.-..|+...+ ...++-+.++++|...+.|. .++..+.++.+.
T Consensus 198 Tp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P----~~TplL~~A~~~G~~~idGl-------~Mlv~Qaa~aF~ 261 (283)
T COG0169 198 TPVGMAGPEGDSPVPAELLPKGAIVYDVVYNP----LETPLLREARAQGAKTIDGL-------GMLVHQAAEAFE 261 (283)
T ss_pred CCCCCCCCCCCCCCcHHhcCcCCEEEEeccCC----CCCHHHHHHHHcCCeEECcH-------HHHHHHHHHHHH
Confidence 8432211 11122234444555556766443 23356677888887754442 345666666543
No 337
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=97.75 E-value=0.00055 Score=56.80 Aligned_cols=116 Identities=22% Similarity=0.310 Sum_probs=79.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAA 116 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~a 116 (429)
.+|.|+|+ |.+|+.....+.+..++.+++ ++++++++.+.+.+.++ +. .. +| ++++++ ++|+|+-+.
T Consensus 1 i~v~iiG~-G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~--~~-~~---~~---~~~ll~~~~~D~V~I~t 70 (120)
T PF01408_consen 1 IRVGIIGA-GSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYG--IP-VY---TD---LEELLADEDVDAVIIAT 70 (120)
T ss_dssp EEEEEEST-SHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTT--SE-EE---SS---HHHHHHHTTESEEEEES
T ss_pred CEEEEECC-cHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhc--cc-ch---hH---HHHHHHhhcCCEEEEec
Confidence 37999995 889999999998865677775 67899988888877664 33 22 23 444554 799999998
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEec
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITT 168 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~ 168 (429)
.+... ..++..|++.|.+.+-=---..-......+.+.++++|..+.+|
T Consensus 71 p~~~h---~~~~~~~l~~g~~v~~EKP~~~~~~~~~~l~~~a~~~~~~~~Vg 119 (120)
T PF01408_consen 71 PPSSH---AEIAKKALEAGKHVLVEKPLALTLEEAEELVEAAKEKGVKVMVG 119 (120)
T ss_dssp SGGGH---HHHHHHHHHTTSEEEEESSSSSSHHHHHHHHHHHHHHTSCEEEE
T ss_pred CCcch---HHHHHHHHHcCCEEEEEcCCcCCHHHHHHHHHHHHHhCCEEEEe
Confidence 66443 78899999999966521100111234456667777888776553
No 338
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=97.74 E-value=2.5e-05 Score=71.19 Aligned_cols=155 Identities=17% Similarity=0.177 Sum_probs=100.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEE
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVV 113 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi 113 (429)
+-+.-+|||+|+-|..|..++..|..++..-.|++.|....... .. ..-.++..|+.|...+++++- .+|-+|
T Consensus 41 ~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~-V~----~~GPyIy~DILD~K~L~eIVVn~RIdWL~ 115 (366)
T KOG2774|consen 41 TQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPAN-VT----DVGPYIYLDILDQKSLEEIVVNKRIDWLV 115 (366)
T ss_pred cCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchh-hc----ccCCchhhhhhccccHHHhhcccccceee
Confidence 34557899999999999999999998765557777665333211 11 223578889999999998875 789999
Q ss_pred ecCCCCC--------------CCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHH
Q 014177 114 HAAGPFQ--------------QAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVM 179 (429)
Q Consensus 114 ~~agp~~--------------~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~ 179 (429)
|..+... ..|-.++++.|.+++.+.+..+.-..|....- .+. ..-..+--....||.||+-
T Consensus 116 HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSP-RNP----TPdltIQRPRTIYGVSKVH 190 (366)
T KOG2774|consen 116 HFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSP-RNP----TPDLTIQRPRTIYGVSKVH 190 (366)
T ss_pred eHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCC-CCC----CCCeeeecCceeechhHHH
Confidence 9753111 02446788888888877765554333322110 000 0001122233449999999
Q ss_pred HHHHHHHHHhhcCCCCeEEEE
Q 014177 180 AAELVRVARNESKGEPERLRF 200 (429)
Q Consensus 180 a~~~~~~~~~~~~~~v~~i~~ 200 (429)
|+.+-+.+..+++.....+|+
T Consensus 191 AEL~GEy~~hrFg~dfr~~rf 211 (366)
T KOG2774|consen 191 AELLGEYFNHRFGVDFRSMRF 211 (366)
T ss_pred HHHHHHHHHhhcCccceeccc
Confidence 998888877777777777765
No 339
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=97.74 E-value=0.00041 Score=67.55 Aligned_cols=84 Identities=14% Similarity=0.154 Sum_probs=60.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
++.+|.|+||+|++|..+++.|.+ +|..+++....+..+ |+.+. .+.+.++|+||.|++
T Consensus 1 ~~~~VaIvGAtGy~G~eLlrlL~~-hp~~~l~~~~s~~~~-----------------~~~~~---~~~~~~~DvvFlalp 59 (313)
T PRK11863 1 MKPKVFIDGEAGTTGLQIRERLAG-RSDIELLSIPEAKRK-----------------DAAAR---RELLNAADVAILCLP 59 (313)
T ss_pred CCcEEEEECCCCHHHHHHHHHHhc-CCCeEEEEEecCCCC-----------------cccCc---hhhhcCCCEEEECCC
Confidence 467999999999999999999988 477777766544322 11111 234568999998874
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
... ...++..+.+.|+..||+|++-
T Consensus 60 -~~~--s~~~~~~~~~~g~~VIDlSadf 84 (313)
T PRK11863 60 -DDA--AREAVALIDNPATRVIDASTAH 84 (313)
T ss_pred -HHH--HHHHHHHHHhCCCEEEECChhh
Confidence 322 2566777778899999999764
No 340
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.73 E-value=0.00011 Score=64.82 Aligned_cols=110 Identities=19% Similarity=0.231 Sum_probs=66.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
|++|.++| .|.+|+.+++.|.+. +++|.+.+|++++.+++.+. . ...+ ++..++++++|+||.|...
T Consensus 1 m~~Ig~IG-lG~mG~~~a~~L~~~--g~~v~~~d~~~~~~~~~~~~---g--~~~~-----~s~~e~~~~~dvvi~~v~~ 67 (163)
T PF03446_consen 1 MMKIGFIG-LGNMGSAMARNLAKA--GYEVTVYDRSPEKAEALAEA---G--AEVA-----DSPAEAAEQADVVILCVPD 67 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHT--TTEEEEEESSHHHHHHHHHT---T--EEEE-----SSHHHHHHHBSEEEE-SSS
T ss_pred CCEEEEEc-hHHHHHHHHHHHHhc--CCeEEeeccchhhhhhhHHh---h--hhhh-----hhhhhHhhcccceEeeccc
Confidence 67999999 699999999999987 89999999999999888763 1 1222 2345666778988888643
Q ss_pred CCCCchHHHHHH-----HHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcE
Q 014177 119 FQQAPKCTVLEA-----AIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPA 165 (429)
Q Consensus 119 ~~~~~~~~v~~a-----a~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~ 165 (429)
... ...++.. .+..|.-+||.++... .....+.+...+.|+..
T Consensus 68 ~~~--v~~v~~~~~i~~~l~~g~iiid~sT~~p--~~~~~~~~~~~~~g~~~ 115 (163)
T PF03446_consen 68 DDA--VEAVLFGENILAGLRPGKIIIDMSTISP--ETSRELAERLAAKGVRY 115 (163)
T ss_dssp HHH--HHHHHHCTTHGGGS-TTEEEEE-SS--H--HHHHHHHHHHHHTTEEE
T ss_pred chh--hhhhhhhhHHhhccccceEEEecCCcch--hhhhhhhhhhhhcccee
Confidence 111 0122221 1133555677765432 23334555556666543
No 341
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.71 E-value=0.00015 Score=71.73 Aligned_cols=105 Identities=23% Similarity=0.315 Sum_probs=73.8
Q ss_pred ccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCc---------------------hhHHHHHHH---hC
Q 014177 32 HFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNR---------------------EKGAAMVST---LG 86 (429)
Q Consensus 32 ~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~---------------------~~~~~l~~~---l~ 86 (429)
..++.++.++|+|+|+ |.+|+.+++.|+.. |. +++++|.+. .|.+..++. +.
T Consensus 17 ~~Q~~L~~~~VlVvG~-GglGs~va~~La~a--Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~in 93 (339)
T PRK07688 17 EGQQKLREKHVLIIGA-GALGTANAEMLVRA--GVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEIN 93 (339)
T ss_pred HHHHHhcCCcEEEECC-CHHHHHHHHHHHHc--CCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHC
Confidence 3456788899999996 77999999999997 55 899999863 222222222 22
Q ss_pred CC--cEEEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 87 KN--SEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 87 ~~--v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
+. ++.+..+++. +.+.++++++|+||.|...+.. ...+.++|.+.++++|..+
T Consensus 94 p~v~v~~~~~~~~~-~~~~~~~~~~DlVid~~Dn~~~--r~~ln~~~~~~~iP~i~~~ 148 (339)
T PRK07688 94 SDVRVEAIVQDVTA-EELEELVTGVDLIIDATDNFET--RFIVNDAAQKYGIPWIYGA 148 (339)
T ss_pred CCcEEEEEeccCCH-HHHHHHHcCCCEEEEcCCCHHH--HHHHHHHHHHhCCCEEEEe
Confidence 33 4445556643 5577788999999999764432 2567788999999988654
No 342
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=97.71 E-value=0.00019 Score=71.63 Aligned_cols=106 Identities=18% Similarity=0.250 Sum_probs=74.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHH-HhC-CCcEEEEeeCCCh-HHHHHHhc----C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVS-TLG-KNSEFAEVNIYNE-GSLLMALR----D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~-~l~-~~v~~~~~Dl~d~-~~l~~~~~----~ 108 (429)
..++..|+|+||+|.+|+.+++.|+++ |+.|.+..|+.++.+.+.. ... .....+..|.... +.+....+ .
T Consensus 76 ~~~~~~VlVvGatG~vG~~iv~~llkr--gf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~ 153 (411)
T KOG1203|consen 76 SKKPTTVLVVGATGKVGRRIVKILLKR--GFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKG 153 (411)
T ss_pred CCCCCeEEEecCCCchhHHHHHHHHHC--CCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhcccc
Confidence 345688999999999999999999998 7999999999998887755 111 2234444444433 22333333 3
Q ss_pred ccEEEecCCCCCC------------CchHHHHHHHHHcCCcEEEeCC
Q 014177 109 VDLVVHAAGPFQQ------------APKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 109 ~DvVi~~agp~~~------------~~~~~v~~aa~~~gv~~vdis~ 143 (429)
..+++-|++-... .|..++++||..+|++.+++-+
T Consensus 154 ~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~ 200 (411)
T KOG1203|consen 154 VVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVG 200 (411)
T ss_pred ceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEE
Confidence 4577777753221 2568999999999998876653
No 343
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=97.70 E-value=0.00041 Score=55.26 Aligned_cols=88 Identities=23% Similarity=0.324 Sum_probs=61.8
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCC---ceEEEE-ecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPD---LQIVVG-SRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g---~~v~v~-~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
||.|+| +|.+|+++++.|.+. + .+|.++ +|++++.+++.++++ +.....| ..++++.+|+||.|.
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~--g~~~~~v~~~~~r~~~~~~~~~~~~~--~~~~~~~------~~~~~~~advvilav 69 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLAS--GIKPHEVIIVSSRSPEKAAELAKEYG--VQATADD------NEEAAQEADVVILAV 69 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHT--TS-GGEEEEEEESSHHHHHHHHHHCT--TEEESEE------HHHHHHHTSEEEE-S
T ss_pred CEEEEC-CCHHHHHHHHHHHHC--CCCceeEEeeccCcHHHHHHHHHhhc--cccccCC------hHHhhccCCEEEEEE
Confidence 588897 799999999999997 6 789866 999999999988764 2222222 234566899999999
Q ss_pred CCCCCCchHHHHHHH--HHcCCcEEEeC
Q 014177 117 GPFQQAPKCTVLEAA--IETKTAYIDVC 142 (429)
Q Consensus 117 gp~~~~~~~~v~~aa--~~~gv~~vdis 142 (429)
.|... ..+++.. ...+.-.|++.
T Consensus 70 ~p~~~---~~v~~~i~~~~~~~~vis~~ 94 (96)
T PF03807_consen 70 KPQQL---PEVLSEIPHLLKGKLVISIA 94 (96)
T ss_dssp -GGGH---HHHHHHHHHHHTTSEEEEES
T ss_pred CHHHH---HHHHHHHhhccCCCEEEEeC
Confidence 87654 4555544 44555566654
No 344
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=97.70 E-value=0.00044 Score=66.90 Aligned_cols=149 Identities=11% Similarity=0.086 Sum_probs=88.2
Q ss_pred cccCCccCCC-------CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc---hhHHHHHHHhCCC--cEEEEe
Q 014177 27 VLDGAHFQMK-------NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR---EKGAAMVSTLGKN--SEFAEV 94 (429)
Q Consensus 27 ~~~~~~~~~~-------~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~---~~~~~l~~~l~~~--v~~~~~ 94 (429)
+||+..+... ..+++++|+|+ |..+++++..|...+ -.+|++++|+. ++++.+++.+... ......
T Consensus 105 NTD~~Gf~~~l~~~~~~~~~k~vlvlGa-GGaarAi~~~l~~~g-~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~ 182 (288)
T PRK12749 105 NTDGTGHIRAIKESGFDIKGKTMVLLGA-GGASTAIGAQGAIEG-LKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVT 182 (288)
T ss_pred ecCHHHHHHHHHhcCCCcCCCEEEEECC-cHHHHHHHHHHHHCC-CCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEe
Confidence 5555554332 45689999997 557999999998862 24899999995 5888887766421 111222
Q ss_pred eCCChHHHHHHhcCccEEEecCCCCCC--CchHHHH-HHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCC
Q 014177 95 NIYNEGSLLMALRDVDLVVHAAGPFQQ--APKCTVL-EAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGI 171 (429)
Q Consensus 95 Dl~d~~~l~~~~~~~DvVi~~agp~~~--~~~~~v~-~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~ 171 (429)
+..+.+.+.+.+.++|+|||+...-.. ....... ...+..+.-.+|+...+. ..++-..++++|..++.|
T Consensus 183 ~~~~~~~l~~~~~~aDivINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~----~T~ll~~A~~~G~~~~~G--- 255 (288)
T PRK12749 183 DLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPH----MTKLLQQAQQAGCKTIDG--- 255 (288)
T ss_pred chhhhhhhhhhcccCCEEEECCCCCCCCCCCCCCCCcHHHCCCCCEEEEecCCCc----cCHHHHHHHHCCCeEECC---
Confidence 333333355566789999999743211 1100111 122334445567765442 335667788888776544
Q ss_pred ccchhHHHHHHHHHHHH
Q 014177 172 YPGVSNVMAAELVRVAR 188 (429)
Q Consensus 172 ~pG~s~~~a~~~~~~~~ 188 (429)
-.++..+.+..+.
T Consensus 256 ----l~ML~~Qa~~~f~ 268 (288)
T PRK12749 256 ----YGMLLWQGAEQFT 268 (288)
T ss_pred ----HHHHHHHHHHHHH
Confidence 2456666666543
No 345
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.70 E-value=0.00045 Score=63.17 Aligned_cols=118 Identities=17% Similarity=0.058 Sum_probs=76.9
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-CccEE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-DVDLV 112 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-~~DvV 112 (429)
..++++|+|+|+|. |.+|+.+++.|.+. |++|++.|++.++++.+.+.++ .+ .+|. + +++. ++|++
T Consensus 23 ~~~l~gk~v~I~G~-G~vG~~~A~~L~~~--G~~Vvv~D~~~~~~~~~~~~~g--~~--~v~~---~---~l~~~~~Dv~ 89 (200)
T cd01075 23 TDSLEGKTVAVQGL-GKVGYKLAEHLLEE--GAKLIVADINEEAVARAAELFG--AT--VVAP---E---EIYSVDADVF 89 (200)
T ss_pred CCCCCCCEEEEECC-CHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHcC--CE--EEcc---h---hhccccCCEE
Confidence 34578899999995 78999999999987 8999999999988888776543 22 2232 2 2232 79999
Q ss_pred EecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCC
Q 014177 113 VHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGI 171 (429)
Q Consensus 113 i~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~ 171 (429)
+.|+...... . +.+.+.+++.|--.....+.. ..-++..++.|+..+|....
T Consensus 90 vp~A~~~~I~--~---~~~~~l~~~~v~~~AN~~~~~--~~~~~~L~~~Gi~~~Pd~~~ 141 (200)
T cd01075 90 APCALGGVIN--D---DTIPQLKAKAIAGAANNQLAD--PRHGQMLHERGILYAPDYVV 141 (200)
T ss_pred EecccccccC--H---HHHHHcCCCEEEECCcCccCC--HhHHHHHHHCCCEEeCceee
Confidence 9998532211 1 223455677764444443321 12234556788887775443
No 346
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=97.70 E-value=0.00012 Score=73.82 Aligned_cols=76 Identities=18% Similarity=0.226 Sum_probs=59.7
Q ss_pred CCCCCCeEEEEcC----------------ChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCC
Q 014177 35 MKNRNARVLVLGG----------------TGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYN 98 (429)
Q Consensus 35 ~~~~~~~VlV~Ga----------------~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d 98 (429)
.++.+++|+|+|| +|.+|.++++.|.++ |++|++++++.+ ++ .+. ....+|+++
T Consensus 184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~--Ga~V~~v~~~~~-~~-----~~~--~~~~~dv~~ 253 (399)
T PRK05579 184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARR--GADVTLVSGPVN-LP-----TPA--GVKRIDVES 253 (399)
T ss_pred cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHC--CCEEEEeCCCcc-cc-----CCC--CcEEEccCC
Confidence 3578899999999 899999999999998 899999988753 11 111 245679999
Q ss_pred hHHHHHHhc----CccEEEecCCCCC
Q 014177 99 EGSLLMALR----DVDLVVHAAGPFQ 120 (429)
Q Consensus 99 ~~~l~~~~~----~~DvVi~~agp~~ 120 (429)
.+++.+.+. ++|++||+||...
T Consensus 254 ~~~~~~~v~~~~~~~DilI~~Aav~d 279 (399)
T PRK05579 254 AQEMLDAVLAALPQADIFIMAAAVAD 279 (399)
T ss_pred HHHHHHHHHHhcCCCCEEEEcccccc
Confidence 877766653 6899999998743
No 347
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=97.69 E-value=0.0014 Score=64.75 Aligned_cols=148 Identities=21% Similarity=0.195 Sum_probs=96.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCC-c-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPD-L-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLV 112 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g-~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvV 112 (429)
+++++|.|+|++|..+...+..+.+. ++ . -+-+++++++++++++++++. . ...+| ++++++ ++|+|
T Consensus 1 ~~~irvgiiG~G~~~~~~~~~~~~~~-~~~~~~vav~d~~~~~a~~~a~~~~~--~---~~~~~---~~~ll~~~~iD~V 71 (342)
T COG0673 1 MKMIRVGIIGAGGIAGKAHLPALAAL-GGGLELVAVVDRDPERAEAFAEEFGI--A---KAYTD---LEELLADPDIDAV 71 (342)
T ss_pred CCeeEEEEEcccHHHHHHhHHHHHhC-CCceEEEEEecCCHHHHHHHHHHcCC--C---cccCC---HHHHhcCCCCCEE
Confidence 45689999997666667788888875 33 2 455668999999999887752 2 22333 555666 48999
Q ss_pred EecCCCCCCCchHHHHHHHHHcCCcEEE---eCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHh
Q 014177 113 VHAAGPFQQAPKCTVLEAAIETKTAYID---VCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARN 189 (429)
Q Consensus 113 i~~agp~~~~~~~~v~~aa~~~gv~~vd---is~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~ 189 (429)
+.+..+... ..++.+|+++|+|.+- ++.+ ......+.+.++++|..+.++--.-+...-..++.++..
T Consensus 72 ~Iatp~~~H---~e~~~~AL~aGkhVl~EKPla~t---~~ea~~l~~~a~~~~~~l~v~~~~Rf~p~~~~~k~li~~--- 142 (342)
T COG0673 72 YIATPNALH---AELALAALEAGKHVLCEKPLALT---LEEAEELVELARKAGVKLMVGFNRRFDPAVQALKELIDS--- 142 (342)
T ss_pred EEcCCChhh---HHHHHHHHhcCCEEEEcCCCCCC---HHHHHHHHHHHHHcCCceeeehhhhcCHHHHHHHHHHhc---
Confidence 999865543 6889999999998762 1212 224446677788888777666433333333344555542
Q ss_pred hcCCCCeEEEEEe
Q 014177 190 ESKGEPERLRFSY 202 (429)
Q Consensus 190 ~~~~~v~~i~~~~ 202 (429)
-...++..++..+
T Consensus 143 g~lG~v~~~~~~~ 155 (342)
T COG0673 143 GALGEVVSVQASF 155 (342)
T ss_pred CCcCceEEEEEEe
Confidence 2455667777643
No 348
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=97.69 E-value=0.00021 Score=60.94 Aligned_cols=99 Identities=24% Similarity=0.352 Sum_probs=66.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCch-------------------hHHHHHHH---hCCC--cEEEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNRE-------------------KGAAMVST---LGKN--SEFAE 93 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~-------------------~~~~l~~~---l~~~--v~~~~ 93 (429)
.++|+|+|+ |.+|+.+++.|+.. |. +++++|.+.- |.+.+++. +.+. ++...
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~--Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~ 78 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARS--GVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIP 78 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHH--TTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEE
T ss_pred CCEEEEECc-CHHHHHHHHHHHHh--CCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeee
Confidence 579999995 66999999999998 44 7888885321 23333322 2233 44455
Q ss_pred eeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCC
Q 014177 94 VNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 94 ~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~ 143 (429)
.++ +.+.+.++++++|+||.|...... ...+.+.|.+.++++|+...
T Consensus 79 ~~~-~~~~~~~~~~~~d~vi~~~d~~~~--~~~l~~~~~~~~~p~i~~~~ 125 (135)
T PF00899_consen 79 EKI-DEENIEELLKDYDIVIDCVDSLAA--RLLLNEICREYGIPFIDAGV 125 (135)
T ss_dssp SHC-SHHHHHHHHHTSSEEEEESSSHHH--HHHHHHHHHHTT-EEEEEEE
T ss_pred ccc-ccccccccccCCCEEEEecCCHHH--HHHHHHHHHHcCCCEEEEEe
Confidence 555 345677888899999999875432 25677789999999987653
No 349
>PRK08223 hypothetical protein; Validated
Probab=97.68 E-value=0.00033 Score=67.13 Aligned_cols=106 Identities=21% Similarity=0.218 Sum_probs=70.7
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHHH---HhCCCcE
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMVS---TLGKNSE 90 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~~---~l~~~v~ 90 (429)
.++.++..+|+|+|+ |.+|+.++..|+..+-+ +++++|.+.- |.+..++ ++.+.++
T Consensus 21 ~Q~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG-~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~ 98 (287)
T PRK08223 21 EQQRLRNSRVAIAGL-GGVGGIHLLTLARLGIG-KFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELE 98 (287)
T ss_pred HHHHHhcCCEEEECC-CHHHHHHHHHHHHhCCC-eEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCE
Confidence 456678899999996 56999999999998533 7888875421 2222222 2333333
Q ss_pred --EEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEe
Q 014177 91 --FAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDV 141 (429)
Q Consensus 91 --~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdi 141 (429)
.+...++. +.+.++++++|+||++...+.......+-++|.+.++++|..
T Consensus 99 V~~~~~~l~~-~n~~~ll~~~DlVvD~~D~~~~~~r~~ln~~c~~~~iP~V~~ 150 (287)
T PRK08223 99 IRAFPEGIGK-ENADAFLDGVDVYVDGLDFFEFDARRLVFAACQQRGIPALTA 150 (287)
T ss_pred EEEEecccCc-cCHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHcCCCEEEE
Confidence 34444443 446778899999999886432111256778999999998864
No 350
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=97.68 E-value=0.00043 Score=67.26 Aligned_cols=112 Identities=23% Similarity=0.312 Sum_probs=73.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++.+++++|+| .|.+|+.++..|... |.+|++.+|++++.+... .++ .+.+ +.+.+.+.++++|+|||+
T Consensus 149 ~l~g~kvlViG-~G~iG~~~a~~L~~~--Ga~V~v~~r~~~~~~~~~-~~G--~~~~-----~~~~l~~~l~~aDiVI~t 217 (296)
T PRK08306 149 TIHGSNVLVLG-FGRTGMTLARTLKAL--GANVTVGARKSAHLARIT-EMG--LSPF-----HLSELAEEVGKIDIIFNT 217 (296)
T ss_pred CCCCCEEEEEC-CcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHH-HcC--Ceee-----cHHHHHHHhCCCCEEEEC
Confidence 45679999999 588999999999987 789999999987654433 232 2222 234577788899999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEE
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAI 166 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i 166 (429)
+++... . ...++ ..+.+.-.+|+++...-. .+ +.+++.|+..+
T Consensus 218 ~p~~~i-~-~~~l~-~~~~g~vIIDla~~pggt----d~-~~a~~~Gv~~~ 260 (296)
T PRK08306 218 IPALVL-T-KEVLS-KMPPEALIIDLASKPGGT----DF-EYAEKRGIKAL 260 (296)
T ss_pred CChhhh-h-HHHHH-cCCCCcEEEEEccCCCCc----Ce-eehhhCCeEEE
Confidence 753211 1 12222 234566678888665221 22 34566777766
No 351
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=97.67 E-value=0.00022 Score=66.62 Aligned_cols=105 Identities=21% Similarity=0.241 Sum_probs=71.8
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-------------------hhHHHHHHHh---CCC--
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-------------------EKGAAMVSTL---GKN-- 88 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-------------------~~~~~l~~~l---~~~-- 88 (429)
.++.++.++|+|+|+ |.+|+.+++.|+..+.+ +++++|.+. .|.+.+++.+ .+.
T Consensus 15 ~q~~L~~~~VlivG~-GglGs~va~~La~~Gvg-~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~ 92 (228)
T cd00757 15 GQEKLKNARVLVVGA-GGLGSPAAEYLAAAGVG-KLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVE 92 (228)
T ss_pred HHHHHhCCcEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCE
Confidence 355678899999995 66999999999997432 788876432 1233333332 232
Q ss_pred cEEEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 89 SEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 89 v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
++.+..+++ .+.+.++++++|+||.|...... ...+-+.|.+.++++|+.+
T Consensus 93 i~~~~~~i~-~~~~~~~~~~~DvVi~~~d~~~~--r~~l~~~~~~~~ip~i~~g 143 (228)
T cd00757 93 IEAYNERLD-AENAEELIAGYDLVLDCTDNFAT--RYLINDACVKLGKPLVSGA 143 (228)
T ss_pred EEEecceeC-HHHHHHHHhCCCEEEEcCCCHHH--HHHHHHHHHHcCCCEEEEE
Confidence 344444443 45577788899999999875432 2457788999999999865
No 352
>PRK13301 putative L-aspartate dehydrogenase; Provisional
Probab=97.66 E-value=0.00049 Score=64.88 Aligned_cols=126 Identities=18% Similarity=0.173 Sum_probs=85.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcC-CCceEEE-EecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEec
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLC-PDLQIVV-GSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHA 115 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~-~g~~v~v-~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~ 115 (429)
.+||.|+| +|.||+.+++.|.+.. .++++.. .+|+.++.+++... +++ .++++++ ..++|+|+-|
T Consensus 2 ~~rvgiIG-~GaIG~~va~~l~~~~~~~~~l~~V~~~~~~~~~~~~~~---------~~~--~~~l~~ll~~~~DlVVE~ 69 (267)
T PRK13301 2 THRIAFIG-LGAIASDVAAGLLADAAQPCQLAALTRNAADLPPALAGR---------VAL--LDGLPGLLAWRPDLVVEA 69 (267)
T ss_pred ceEEEEEC-ccHHHHHHHHHHhcCCCCceEEEEEecCCHHHHHHhhcc---------Ccc--cCCHHHHhhcCCCEEEEC
Confidence 47899999 7999999999987631 2355544 45666666555431 222 2235554 4589999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHH--HHHHhhHHHHHHcCCcEEecCCCccchhHHHH
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYS--QRAKSFKDRAIAANIPAITTGGIYPGVSNVMA 180 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~--~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a 180 (429)
|++... ....+.+++.|++.+-+|-.. +. .....+.+.+++.|..+.+-+|..-|+..+-+
T Consensus 70 A~~~av---~e~~~~iL~~g~dlvv~SvGA-LaD~~~~~~l~~~A~~~g~~i~ipSGAigGlD~l~a 132 (267)
T PRK13301 70 AGQQAI---AEHAEGCLTAGLDMIICSAGA-LADDALRARLIAAAEAGGARIRVPAGAIAGLDYLQA 132 (267)
T ss_pred CCHHHH---HHHHHHHHhcCCCEEEEChhH-hcCHHHHHHHHHHHHhCCCEEEEeChHHHhHHHHHH
Confidence 987543 566778899999999877322 11 12234566778888899888888888766544
No 353
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=97.65 E-value=7e-05 Score=63.04 Aligned_cols=94 Identities=22% Similarity=0.285 Sum_probs=59.9
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCch-hH-HHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNRE-KG-AAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~-~~-~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+||+|+|++|.+|+.+++.+.++ ++++++.+ +|+.+ .. +.+.+..+ .. ...+.-.++++++++.+|+||...
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~-~~~~lv~~v~~~~~~~~g~d~g~~~~--~~--~~~~~v~~~l~~~~~~~DVvIDfT 75 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILES-PGFELVGAVDRKPSAKVGKDVGELAG--IG--PLGVPVTDDLEELLEEADVVIDFT 75 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS-TTEEEEEEEETTTSTTTTSBCHHHCT--SS--T-SSBEBS-HHHHTTH-SEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHhc-CCcEEEEEEecCCcccccchhhhhhC--cC--CcccccchhHHHhcccCCEEEEcC
Confidence 48999999999999999999984 68887654 56552 11 11111111 00 112222245777888899999998
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEEe
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYIDV 141 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vdi 141 (429)
.|.. ....++.|+++|++.|--
T Consensus 76 ~p~~---~~~~~~~~~~~g~~~ViG 97 (124)
T PF01113_consen 76 NPDA---VYDNLEYALKHGVPLVIG 97 (124)
T ss_dssp -HHH---HHHHHHHHHHHT-EEEEE
T ss_pred ChHH---hHHHHHHHHhCCCCEEEE
Confidence 6543 367899999999999853
No 354
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.64 E-value=0.00043 Score=68.05 Aligned_cols=157 Identities=11% Similarity=0.013 Sum_probs=89.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCc-----eEEEEecCch--hHHHHHHHhCCCc----EEEEeeCCChHHHHHHhc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDL-----QIVVGSRNRE--KGAAMVSTLGKNS----EFAEVNIYNEGSLLMALR 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-----~v~v~~R~~~--~~~~l~~~l~~~v----~~~~~Dl~d~~~l~~~~~ 107 (429)
+++|.|+|++|.||+.++..|+.++--- ++++.|.+.. +++..+-++..-. .-+...-. ..+.++
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~----~~~~~~ 77 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDD----PNVAFK 77 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecC----cHHHhC
Confidence 4799999998999999999998753222 7999998543 3443333322100 00112111 245678
Q ss_pred CccEEEecCCCCCCCc---------h----HHHHHHHHHcCC-c--EEEeCCChhHHHHHHhhHHHHHHcC-CcEEecCC
Q 014177 108 DVDLVVHAAGPFQQAP---------K----CTVLEAAIETKT-A--YIDVCDDTIYSQRAKSFKDRAIAAN-IPAITTGG 170 (429)
Q Consensus 108 ~~DvVi~~agp~~~~~---------~----~~v~~aa~~~gv-~--~vdis~~~~~~~~~~~~~~~a~~~g-~~~i~~~g 170 (429)
++|+||.+||.....+ + ..+.+...+.+- + ++.++.-.+... .+ ..+..| .+ ..
T Consensus 78 daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t---~~--~~k~sg~~p----~~ 148 (322)
T cd01338 78 DADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNA---LI--AMKNAPDIP----PD 148 (322)
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHH---HH--HHHHcCCCC----hH
Confidence 9999999998643222 1 122333334431 2 233332222111 11 011221 22 01
Q ss_pred CccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 171 IYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 171 ~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
-.+|.+++-..++...+++.++.+...++. |+++|+++
T Consensus 149 ~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~-~~V~GeHG 186 (322)
T cd01338 149 NFTAMTRLDHNRAKSQLAKKAGVPVTDVKN-MVIWGNHS 186 (322)
T ss_pred heEEehHHHHHHHHHHHHHHhCcChhHeEE-EEEEeCCc
Confidence 237778888888888888888888888886 45567663
No 355
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.63 E-value=0.00028 Score=69.18 Aligned_cols=122 Identities=24% Similarity=0.318 Sum_probs=78.4
Q ss_pred ccccccccccccccccccccCCccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCc
Q 014177 10 STATAIMASATSATKETVLDGAHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNS 89 (429)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v 89 (429)
++-++++....|...--+.-......++..++|+|+|+ |.+|+.+++.|...+ ..+|++++|++++.+++++.++.
T Consensus 149 r~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g-~~~V~v~~r~~~ra~~la~~~g~-- 224 (311)
T cd05213 149 RTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKG-VAEITIANRTYERAEELAKELGG-- 224 (311)
T ss_pred hhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHcCC--
Confidence 34455666665554333221111111256799999995 999999999998742 46899999999998888887753
Q ss_pred EEEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHc----CCcEEEeCC
Q 014177 90 EFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIET----KTAYIDVCD 143 (429)
Q Consensus 90 ~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~----gv~~vdis~ 143 (429)
.. .+.+++.+.+.++|+||.|.+.... ..+++...+. +.-.+|++-
T Consensus 225 ~~-----~~~~~~~~~l~~aDvVi~at~~~~~---~~~~~~~~~~~~~~~~~viDlav 274 (311)
T cd05213 225 NA-----VPLDELLELLNEADVVISATGAPHY---AKIVERAMKKRSGKPRLIVDLAV 274 (311)
T ss_pred eE-----EeHHHHHHHHhcCCEEEECCCCCch---HHHHHHHHhhCCCCCeEEEEeCC
Confidence 22 2234566778899999999875432 2334443332 233568774
No 356
>PRK04148 hypothetical protein; Provisional
Probab=97.59 E-value=0.0005 Score=58.26 Aligned_cols=92 Identities=17% Similarity=0.182 Sum_probs=74.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
++++++++| +| .|..++..|.+. |++|++.|.++...+...+. .++++..|+.+++ -++-+++|+|+.+=.
T Consensus 16 ~~~kileIG-~G-fG~~vA~~L~~~--G~~ViaIDi~~~aV~~a~~~---~~~~v~dDlf~p~--~~~y~~a~liysirp 86 (134)
T PRK04148 16 KNKKIVELG-IG-FYFKVAKKLKES--GFDVIVIDINEKAVEKAKKL---GLNAFVDDLFNPN--LEIYKNAKLIYSIRP 86 (134)
T ss_pred cCCEEEEEE-ec-CCHHHHHHHHHC--CCEEEEEECCHHHHHHHHHh---CCeEEECcCCCCC--HHHHhcCCEEEEeCC
Confidence 447899999 57 899999999987 89999999999977766542 4789999999876 245679999999876
Q ss_pred CCCCCchHHHHHHHHHcCCcEEE
Q 014177 118 PFQQAPKCTVLEAAIETKTAYID 140 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vd 140 (429)
|.... .++++.|.+.+++.+.
T Consensus 87 p~el~--~~~~~la~~~~~~~~i 107 (134)
T PRK04148 87 PRDLQ--PFILELAKKINVPLII 107 (134)
T ss_pred CHHHH--HHHHHHHHHcCCCEEE
Confidence 64432 5889999999999864
No 357
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.57 E-value=0.00038 Score=70.06 Aligned_cols=104 Identities=20% Similarity=0.296 Sum_probs=72.9
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC-------------------chhHHHHHHHh---CCCcE-
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN-------------------REKGAAMVSTL---GKNSE- 90 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~-------------------~~~~~~l~~~l---~~~v~- 90 (429)
++.++.++|+|+|+ |.+|+.+++.|+..+.+ +++++|++ ..|.+.+++.+ .+.++
T Consensus 130 q~~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg-~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v 207 (376)
T PRK08762 130 QRRLLEARVLLIGA-GGLGSPAALYLAAAGVG-TLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQV 207 (376)
T ss_pred HHHHhcCcEEEECC-CHHHHHHHHHHHHcCCC-eEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEE
Confidence 34577899999995 66999999999997422 89999987 34555444443 23333
Q ss_pred -EEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 91 -FAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 91 -~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
.....++ .+.+.++++++|+||+|...+.. ...+-++|.+.++++|..+
T Consensus 208 ~~~~~~~~-~~~~~~~~~~~D~Vv~~~d~~~~--r~~ln~~~~~~~ip~i~~~ 257 (376)
T PRK08762 208 EAVQERVT-SDNVEALLQDVDVVVDGADNFPT--RYLLNDACVKLGKPLVYGA 257 (376)
T ss_pred EEEeccCC-hHHHHHHHhCCCEEEECCCCHHH--HHHHHHHHHHcCCCEEEEE
Confidence 3333333 34577788899999999875432 1457788999999998764
No 358
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=97.57 E-value=0.00017 Score=71.51 Aligned_cols=94 Identities=19% Similarity=0.234 Sum_probs=64.4
Q ss_pred eEEEEcCChHHHHHHHHHHhHc-CCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKL-CPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~-~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
+|.|+||+|++|+.+++.|.++ +|..++....++....+.+. +. ..+....|+.. ..++++|+||-|+|..
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~--~~-~~~~~~~~~~~-----~~~~~~D~v~~a~g~~ 72 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVT--FK-GKELEVNEAKI-----ESFEGIDIALFSAGGS 72 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeee--eC-CeeEEEEeCCh-----HHhcCCCEEEECCCHH
Confidence 5899999999999999999875 34455555555544333332 11 24555666641 2347899999998754
Q ss_pred CCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 120 QQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 120 ~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
.. ..++....+.|+..||.+++.
T Consensus 73 ~s---~~~a~~~~~~G~~VID~ss~~ 95 (339)
T TIGR01296 73 VS---KEFAPKAAKCGAIVIDNTSAF 95 (339)
T ss_pred HH---HHHHHHHHHCCCEEEECCHHH
Confidence 32 577777888999889998643
No 359
>PRK05086 malate dehydrogenase; Provisional
Probab=97.57 E-value=0.003 Score=61.86 Aligned_cols=97 Identities=19% Similarity=0.199 Sum_probs=59.3
Q ss_pred CeEEEEcCChHHHHHHHHHHhH-cCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSK-LCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~-~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
|+|+|+||+|.+|++++..|.. .....++++.+|++.. +..+-.+. +....+.. .+.+++.+.++++|+||.|+
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIita 77 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PGVAVDLSHIPTAVKIKG--FSGEDPTPALEGADVVLISA 77 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cceehhhhcCCCCceEEE--eCCCCHHHHcCCCCEEEEcC
Confidence 6899999999999999998855 2234688999987542 21111111 11112222 12234556778999999999
Q ss_pred CCCCCCc-------------hHHHHHHHHHcCCcEE
Q 014177 117 GPFQQAP-------------KCTVLEAAIETKTAYI 139 (429)
Q Consensus 117 gp~~~~~-------------~~~v~~aa~~~gv~~v 139 (429)
|.....+ ...++++..+++.+.+
T Consensus 78 G~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~i 113 (312)
T PRK05086 78 GVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKAC 113 (312)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 8644321 2345556666666554
No 360
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=97.57 E-value=0.00053 Score=66.37 Aligned_cols=82 Identities=16% Similarity=0.182 Sum_probs=58.9
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
.+|.|+|++|++|..+++.|.. +|..++..+..+.. .+..+ ..++++++|+||-|++.
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~-HP~~el~~l~s~~~-----------------~~~~~---~~~~~~~~D~vFlalp~- 59 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSG-RDDIELLSIAPDRR-----------------KDAAE---RAKLLNAADVAILCLPD- 59 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhC-CCCeEEEEEecccc-----------------cCcCC---HhHhhcCCCEEEECCCH-
Confidence 4799999999999999999998 58888776643221 11112 23456789999988643
Q ss_pred CCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 120 QQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 120 ~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
.. ...++..+.+.|+..||+|++-
T Consensus 60 ~~--s~~~~~~~~~~g~~VIDlSadf 83 (310)
T TIGR01851 60 DA--AREAVSLVDNPNTCIIDASTAY 83 (310)
T ss_pred HH--HHHHHHHHHhCCCEEEECChHH
Confidence 21 2566777778899999999764
No 361
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=97.56 E-value=0.00046 Score=65.10 Aligned_cols=96 Identities=24% Similarity=0.315 Sum_probs=74.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ 115 (429)
++++|||+|||+ =|+.+++.|.+. ++++++..-..... ... .....+..-+.|.+++.++++ ++++||.+
T Consensus 1 ~~~~IlvlgGT~-egr~la~~L~~~--g~~v~~Svat~~g~---~~~--~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDA 72 (248)
T PRK08057 1 MMPRILLLGGTS-EARALARALAAA--GVDIVLSLAGRTGG---PAD--LPGPVRVGGFGGAEGLAAYLREEGIDLVIDA 72 (248)
T ss_pred CCceEEEEechH-HHHHHHHHHHhC--CCeEEEEEccCCCC---ccc--CCceEEECCCCCHHHHHHHHHHCCCCEEEEC
Confidence 467899999998 899999999886 67776654333221 111 245667777778899999997 79999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEe
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDV 141 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdi 141 (429)
.-||...-+.++.++|.+.+++|+-+
T Consensus 73 THPfA~~is~~a~~ac~~~~ipyiR~ 98 (248)
T PRK08057 73 THPYAAQISANAAAACRALGIPYLRL 98 (248)
T ss_pred CCccHHHHHHHHHHHHHHhCCcEEEE
Confidence 99987544578999999999999954
No 362
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=97.55 E-value=0.00045 Score=63.79 Aligned_cols=105 Identities=21% Similarity=0.259 Sum_probs=69.0
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc------------------hhHHHHHHH---hCCC--c
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR------------------EKGAAMVST---LGKN--S 89 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~------------------~~~~~l~~~---l~~~--v 89 (429)
.++.++.++|+|+|+ |.+|+.+++.|+..+.+ +++++|.+. .|.+.+++. +.+. +
T Consensus 22 ~q~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg-~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v 99 (212)
T PRK08644 22 LLEKLKKAKVGIAGA-GGLGSNIAVALARSGVG-NLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEI 99 (212)
T ss_pred HHHHHhCCCEEEECc-CHHHHHHHHHHHHcCCC-eEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEE
Confidence 455678899999996 66999999999997432 688888762 133333332 2233 3
Q ss_pred EEEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHc-CCcEEEeC
Q 014177 90 EFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIET-KTAYIDVC 142 (429)
Q Consensus 90 ~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~-gv~~vdis 142 (429)
+.+...+++ +.+.++++++|+||.|...+.. ...+.+.|.+. ++++|..+
T Consensus 100 ~~~~~~i~~-~~~~~~~~~~DvVI~a~D~~~~--r~~l~~~~~~~~~~p~I~~~ 150 (212)
T PRK08644 100 EAHNEKIDE-DNIEELFKDCDIVVEAFDNAET--KAMLVETVLEHPGKKLVAAS 150 (212)
T ss_pred EEEeeecCH-HHHHHHHcCCCEEEECCCCHHH--HHHHHHHHHHhCCCCEEEee
Confidence 334444544 4466778889999988654322 14566778887 88887553
No 363
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=97.54 E-value=0.0006 Score=71.58 Aligned_cols=132 Identities=11% Similarity=0.143 Sum_probs=83.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEe
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVH 114 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~ 114 (429)
.+++++++|+|+ |.+|++++..|.+. |++|++++|+.++++.+.+.++. .. .+..+ +.+. ....|+|||
T Consensus 376 ~~~~k~vlIlGa-GGagrAia~~L~~~--G~~V~i~nR~~e~a~~la~~l~~--~~--~~~~~---~~~~~~~~~diiIN 445 (529)
T PLN02520 376 PLAGKLFVVIGA-GGAGKALAYGAKEK--GARVVIANRTYERAKELADAVGG--QA--LTLAD---LENFHPEEGMILAN 445 (529)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHhCC--ce--eeHhH---hhhhccccCeEEEe
Confidence 356789999997 67999999999997 67999999999999888876632 11 22222 2222 236799999
Q ss_pred cCCCCCC--CchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHH
Q 014177 115 AAGPFQQ--APKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVAR 188 (429)
Q Consensus 115 ~agp~~~--~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~ 188 (429)
+.+.-.. ....++-...++.+.-.+|+...+. ..++-..+++.|..++.| ..++..+.+..+.
T Consensus 446 tT~vGm~~~~~~~pl~~~~l~~~~~v~D~vY~P~----~T~ll~~A~~~G~~~~~G-------l~MLv~Qa~~~f~ 510 (529)
T PLN02520 446 TTSVGMQPNVDETPISKHALKHYSLVFDAVYTPK----ITRLLREAEESGAIIVSG-------TEMFIRQAYEQFE 510 (529)
T ss_pred cccCCCCCCCCCCcccHhhCCCCCEEEEeccCCC----cCHHHHHHHHCCCeEeCc-------HHHHHHHHHHHHH
Confidence 9843221 1111232233344444577765542 235567788888776443 3556666666543
No 364
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=97.54 E-value=0.0017 Score=64.63 Aligned_cols=124 Identities=18% Similarity=0.123 Sum_probs=77.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE--ecCchhHHHHHHHhCCCcEEEEeeCC------------------C
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG--SRNREKGAAMVSTLGKNSEFAEVNIY------------------N 98 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~--~R~~~~~~~l~~~l~~~v~~~~~Dl~------------------d 98 (429)
||+|.|+|+||.||...++.+.+....++|+.. +++.+++.+..+++.++.- +..|-. .
T Consensus 1 mk~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v-~i~~~~~~~~l~~~l~~~~~~v~~G 79 (385)
T PRK05447 1 MKRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYV-VVADEEAAKELKEALAAAGIEVLAG 79 (385)
T ss_pred CceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEE-EEcCHHHHHHHHHhhccCCceEEEC
Confidence 479999999999999999888763224666654 6888888888887764321 112211 1
Q ss_pred hHHHHHHhc--CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEe
Q 014177 99 EGSLLMALR--DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAIT 167 (429)
Q Consensus 99 ~~~l~~~~~--~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~ 167 (429)
.+.+.+++. ++|+|+++..-+. | ....-+|+++|.+.. ++.-......-..+.+.+++.|..+++
T Consensus 80 ~~~~~~l~~~~~vD~Vv~Ai~G~a--G-l~ptl~Ai~aGK~Va-LANKEslV~aG~~i~~~a~~~g~~i~P 146 (385)
T PRK05447 80 EEGLCELAALPEADVVVAAIVGAA--G-LLPTLAAIRAGKRIA-LANKESLVCAGELVMDAAKKSGAQILP 146 (385)
T ss_pred hhHHHHHhcCCCCCEEEEeCcCcc--c-HHHHHHHHHCCCcEE-EeCHHHHHhhHHHHHHHHHHcCCeEEE
Confidence 334555554 5799999875332 2 345667889996654 433332222222445566677777655
No 365
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.51 E-value=0.00084 Score=67.35 Aligned_cols=101 Identities=18% Similarity=0.206 Sum_probs=71.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+...+|+|+|+ |.+|..+++.|... |.+|++++|++++++.+...++. .+..+..+.+.+.+.++++|+||+++
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~l--Ga~V~v~d~~~~~~~~l~~~~g~---~v~~~~~~~~~l~~~l~~aDvVI~a~ 238 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGL--GATVTILDINIDRLRQLDAEFGG---RIHTRYSNAYEIEDAVKRADLLIGAV 238 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcCc---eeEeccCCHHHHHHHHccCCEEEEcc
Confidence 35678999995 88999999999987 78999999999888777665532 23345667778888999999999997
Q ss_pred CCCCCC----chHHHHHHHHHcCCcEEEeCCC
Q 014177 117 GPFQQA----PKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 117 gp~~~~----~~~~v~~aa~~~gv~~vdis~~ 144 (429)
+..... -+...++. .+.+.-.+|++.+
T Consensus 239 ~~~g~~~p~lit~~~l~~-mk~g~vIvDva~d 269 (370)
T TIGR00518 239 LIPGAKAPKLVSNSLVAQ-MKPGAVIVDVAID 269 (370)
T ss_pred ccCCCCCCcCcCHHHHhc-CCCCCEEEEEecC
Confidence 431110 01233332 3455667787754
No 366
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=97.50 E-value=0.00043 Score=68.58 Aligned_cols=97 Identities=18% Similarity=0.248 Sum_probs=61.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHc-CCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKL-CPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~-~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+.++|.|+||+|++|+.+++.|.++ +|..++..+.......+.+.. ...+....++. .+ .++++|+||.|+
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~---~~~~~~v~~~~-~~----~~~~~D~vf~a~ 77 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTF---EGRDYTVEELT-ED----SFDGVDIALFSA 77 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeee---cCceeEEEeCC-HH----HHcCCCEEEECC
Confidence 3478999999999999999999875 345566544322221111111 11233333332 22 246899999887
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
+.-. ...++..+.+.|+..||.|++.
T Consensus 78 p~~~---s~~~~~~~~~~g~~VIDlS~~f 103 (344)
T PLN02383 78 GGSI---SKKFGPIAVDKGAVVVDNSSAF 103 (344)
T ss_pred CcHH---HHHHHHHHHhCCCEEEECCchh
Confidence 5332 2567777778899999999764
No 367
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=97.50 E-value=0.00076 Score=58.08 Aligned_cols=76 Identities=28% Similarity=0.318 Sum_probs=55.6
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
+||.|+|++|.+|+.++..|....-..++++.|++.++++..+.++. ......... .+. +.++++|+||.
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~~----~~~~~aDivvi 75 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS-GDY----EALKDADIVVI 75 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE-SSG----GGGTTESEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc-ccc----cccccccEEEE
Confidence 58999999999999999999987545689999999887776655442 112222222 333 45779999999
Q ss_pred cCCCCC
Q 014177 115 AAGPFQ 120 (429)
Q Consensus 115 ~agp~~ 120 (429)
++|...
T Consensus 76 tag~~~ 81 (141)
T PF00056_consen 76 TAGVPR 81 (141)
T ss_dssp TTSTSS
T ss_pred eccccc
Confidence 998644
No 368
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=97.49 E-value=0.00029 Score=69.37 Aligned_cols=96 Identities=19% Similarity=0.233 Sum_probs=63.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHc-CCCceEEEEecCchhHHHHHHHhCCCcEEEEe-eCCChHHHHHHhcCccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKL-CPDLQIVVGSRNREKGAAMVSTLGKNSEFAEV-NIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~-~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~-Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+.++|.|+||||++|..+.+.|.++ +|..++..+..+....+.+. +... + +.+ |+ +.+ .+.++|+||.+
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~--~~~~-~-~~v~~~---~~~--~~~~~Dvvf~a 73 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLR--FGGK-S-VTVQDA---AEF--DWSQAQLAFFV 73 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEE--ECCc-c-eEEEeC---chh--hccCCCEEEEC
Confidence 4579999999999999999999875 57778777654433222221 1111 1 112 22 211 23689999988
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
++.-. ...++..+.+.|+..||.+++.
T Consensus 74 ~p~~~---s~~~~~~~~~~g~~VIDlS~~f 100 (336)
T PRK08040 74 AGREA---SAAYAEEATNAGCLVIDSSGLF 100 (336)
T ss_pred CCHHH---HHHHHHHHHHCCCEEEECChHh
Confidence 75322 2577777888999999998754
No 369
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=97.49 E-value=0.00051 Score=64.89 Aligned_cols=97 Identities=26% Similarity=0.348 Sum_probs=71.6
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ag 117 (429)
|+|||+|||+ =|+.+++.|.+. ++ +++..-. +....+..........+..-+.|.+.+.++++ +++.||.+.-
T Consensus 1 m~ILvlgGTt-E~r~la~~L~~~--g~-v~~sv~t-~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATH 75 (249)
T PF02571_consen 1 MKILVLGGTT-EGRKLAERLAEA--GY-VIVSVAT-SYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATH 75 (249)
T ss_pred CEEEEEechH-HHHHHHHHHHhc--CC-EEEEEEh-hhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCC
Confidence 6899999998 899999999997 55 4432222 22222322211245667777768899999996 8999999999
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEe
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDV 141 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdi 141 (429)
||...-+.++.++|.+.|++|+-+
T Consensus 76 PfA~~is~na~~a~~~~~ipylR~ 99 (249)
T PF02571_consen 76 PFAAEISQNAIEACRELGIPYLRF 99 (249)
T ss_pred chHHHHHHHHHHHHhhcCcceEEE
Confidence 986544578999999999999843
No 370
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=97.48 E-value=0.00097 Score=62.77 Aligned_cols=105 Identities=13% Similarity=0.204 Sum_probs=69.6
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHHHH---hCCCcE
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMVST---LGKNSE 90 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~~~---l~~~v~ 90 (429)
.++.++.++|+|+|+ |.+|+.+++.|+..+-+ +++++|.+.- |.+.+++. +.+.++
T Consensus 18 ~q~~L~~~~VlvvG~-GglGs~va~~La~~Gvg-~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~ 95 (240)
T TIGR02355 18 GQEALKASRVLIVGL-GGLGCAASQYLAAAGVG-NLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIA 95 (240)
T ss_pred HHHHHhCCcEEEECc-CHHHHHHHHHHHHcCCC-EEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcE
Confidence 456688899999996 66999999999997433 7888876432 22222222 223333
Q ss_pred EEEe--eCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 91 FAEV--NIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 91 ~~~~--Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
+... .+ +.+.+.++++++|+||.|...+.. ...+-++|.+.++++|.-+
T Consensus 96 i~~~~~~i-~~~~~~~~~~~~DlVvd~~D~~~~--r~~ln~~~~~~~ip~v~~~ 146 (240)
T TIGR02355 96 INPINAKL-DDAELAALIAEHDIVVDCTDNVEV--RNQLNRQCFAAKVPLVSGA 146 (240)
T ss_pred EEEEeccC-CHHHHHHHhhcCCEEEEcCCCHHH--HHHHHHHHHHcCCCEEEEE
Confidence 3332 33 334567788899999999865432 2456678899999988643
No 371
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.48 E-value=0.00063 Score=67.85 Aligned_cols=105 Identities=17% Similarity=0.191 Sum_probs=71.5
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-------------------hhHHHHHHHh---CCC--
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-------------------EKGAAMVSTL---GKN-- 88 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-------------------~~~~~l~~~l---~~~-- 88 (429)
.++.++.++|+|+|+ |.+|+.+++.|+..+-+ +++++|.+. .|.+..++.+ .+.
T Consensus 22 ~q~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg-~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~ 99 (355)
T PRK05597 22 GQQSLFDAKVAVIGA-GGLGSPALLYLAGAGVG-HITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVK 99 (355)
T ss_pred HHHHHhCCeEEEECC-CHHHHHHHHHHHHcCCC-eEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcE
Confidence 456678899999996 66999999999997433 788888653 2333333332 233
Q ss_pred cEEEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 89 SEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 89 v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
++.....++. +...++++++|+||.|...+.. ..-+-++|.+.++++|..+
T Consensus 100 v~~~~~~i~~-~~~~~~~~~~DvVvd~~d~~~~--r~~~n~~c~~~~ip~v~~~ 150 (355)
T PRK05597 100 VTVSVRRLTW-SNALDELRDADVILDGSDNFDT--RHLASWAAARLGIPHVWAS 150 (355)
T ss_pred EEEEEeecCH-HHHHHHHhCCCEEEECCCCHHH--HHHHHHHHHHcCCCEEEEE
Confidence 3344445543 4456778899999999865432 1346678999999988543
No 372
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.47 E-value=0.00095 Score=68.79 Aligned_cols=93 Identities=18% Similarity=0.190 Sum_probs=72.1
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~agp 118 (429)
|+|+|+|+ |.+|+.+++.|.++ ++++++.++++++.+.+.+.. .+.++.+|.++.+.+.++ ++++|.||-+.+.
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~--g~~v~vid~~~~~~~~~~~~~--~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~~ 75 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGE--NNDVTVIDTDEERLRRLQDRL--DVRTVVGNGSSPDVLREAGAEDADLLIAVTDS 75 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHhhc--CEEEEEeCCCCHHHHHHcCCCcCCEEEEecCC
Confidence 47999995 99999999999987 789999999999887765432 478899999999988888 7899999988753
Q ss_pred CCCCchHHHHHHHHHc-CCcEE
Q 014177 119 FQQAPKCTVLEAAIET-KTAYI 139 (429)
Q Consensus 119 ~~~~~~~~v~~aa~~~-gv~~v 139 (429)
.. .+..+...|.+. +..++
T Consensus 76 ~~--~n~~~~~~~r~~~~~~~i 95 (453)
T PRK09496 76 DE--TNMVACQIAKSLFGAPTT 95 (453)
T ss_pred hH--HHHHHHHHHHHhcCCCeE
Confidence 22 123445666665 65554
No 373
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=97.46 E-value=0.0013 Score=64.85 Aligned_cols=96 Identities=22% Similarity=0.289 Sum_probs=61.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCce---EEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQ---IVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~---v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
+.++|.|+||+|++|+.+++.|.+ ++.++ +.++.......+.+ .+... +...-++ |.+. ++++|+||.
T Consensus 4 ~~~~VaIvGATG~vG~ell~lL~~-h~~f~v~~l~~~aS~~saGk~~--~~~~~-~l~v~~~-~~~~----~~~~Divf~ 74 (347)
T PRK06728 4 KGYHVAVVGATGAVGQKIIELLEK-ETKFNIAEVTLLSSKRSAGKTV--QFKGR-EIIIQEA-KINS----FEGVDIAFF 74 (347)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHH-CCCCCcccEEEEECcccCCCCe--eeCCc-ceEEEeC-CHHH----hcCCCEEEE
Confidence 346899999999999999999986 35666 54444332222222 11111 2222233 3332 368999998
Q ss_pred cCCCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 115 AAGPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
+++.-. ...+...+.+.|+..||.+++.
T Consensus 75 a~~~~~---s~~~~~~~~~~G~~VID~Ss~f 102 (347)
T PRK06728 75 SAGGEV---SRQFVNQAVSSGAIVIDNTSEY 102 (347)
T ss_pred CCChHH---HHHHHHHHHHCCCEEEECchhh
Confidence 875432 2577777888999999998764
No 374
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=97.46 E-value=0.0025 Score=63.23 Aligned_cols=98 Identities=22% Similarity=0.183 Sum_probs=61.4
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHhC--------CCcEEEEeeCCChHHHHHHhcCcc
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTLG--------KNSEFAEVNIYNEGSLLMALRDVD 110 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l~--------~~v~~~~~Dl~d~~~l~~~~~~~D 110 (429)
++|.|+|++|++|+.+++.|.++ +.++++.+ +++....+.+.+..+ ....-..+.-.+.+ .+.++|
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~-~~~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~D 75 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKH-PYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEPEPV----ASKDVD 75 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeCCHH----HhccCC
Confidence 47999999999999999988874 56788776 443332222221111 00111111111222 246899
Q ss_pred EEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 111 LVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 111 vVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
+|+.|++.... ..+.+.+.+.|++.||.+++.
T Consensus 76 vVf~a~p~~~s---~~~~~~~~~~G~~VIDlsg~f 107 (341)
T TIGR00978 76 IVFSALPSEVA---EEVEPKLAEAGKPVFSNASNH 107 (341)
T ss_pred EEEEeCCHHHH---HHHHHHHHHCCCEEEECChhh
Confidence 99988754322 566788889999999999773
No 375
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=97.46 E-value=0.001 Score=63.36 Aligned_cols=107 Identities=16% Similarity=0.179 Sum_probs=65.0
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHHHH---hCCCcEE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMVST---LGKNSEF 91 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~~~---l~~~v~~ 91 (429)
.+.++.++|+|+|+ |.+|+++++.|+..+- -+++++|.+.- |.+.+++. +.+.+++
T Consensus 25 ~~kL~~s~VlVvG~-GGVGs~vae~Lar~GV-g~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V 102 (268)
T PRK15116 25 LQLFADAHICVVGI-GGVGSWAAEALARTGI-GAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRV 102 (268)
T ss_pred HHHhcCCCEEEECc-CHHHHHHHHHHHHcCC-CEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEE
Confidence 45578899999995 6699999999999742 37888886522 11122222 2223333
Q ss_pred EEe-eCCChHHHHHHhc-CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 92 AEV-NIYNEGSLLMALR-DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 92 ~~~-Dl~d~~~l~~~~~-~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
... +..+.+.+.+++. ++|+||.|.+.... ...+.+.|.+.++++|...+.
T Consensus 103 ~~i~~~i~~e~~~~ll~~~~D~VIdaiD~~~~--k~~L~~~c~~~~ip~I~~gGa 155 (268)
T PRK15116 103 TVVDDFITPDNVAEYMSAGFSYVIDAIDSVRP--KAALIAYCRRNKIPLVTTGGA 155 (268)
T ss_pred EEEecccChhhHHHHhcCCCCEEEEcCCCHHH--HHHHHHHHHHcCCCEEEECCc
Confidence 222 2223444555554 68888888765332 245677777777777765543
No 376
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=97.45 E-value=0.0013 Score=56.60 Aligned_cols=98 Identities=23% Similarity=0.259 Sum_probs=66.6
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCc-------------------hhHHHHHHH---hCCCcE--EEEee
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNR-------------------EKGAAMVST---LGKNSE--FAEVN 95 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~-------------------~~~~~l~~~---l~~~v~--~~~~D 95 (429)
+|+|+|+ |.+|+.+++.|... |. +++++|.+. .|.+.+++. +.+.++ ....+
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~--Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~ 77 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARS--GVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEG 77 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHC--CCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeee
Confidence 5899995 77999999999997 44 788887552 122222222 223333 34444
Q ss_pred CCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 96 IYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 96 l~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
+.+. ...+.++++|+||.|...... ...+.+.|.+.++++++....
T Consensus 78 ~~~~-~~~~~~~~~diVi~~~d~~~~--~~~l~~~~~~~~i~~i~~~~~ 123 (143)
T cd01483 78 ISED-NLDDFLDGVDLVIDAIDNIAV--RRALNRACKELGIPVIDAGGL 123 (143)
T ss_pred cChh-hHHHHhcCCCEEEECCCCHHH--HHHHHHHHHHcCCCEEEEcCC
Confidence 4433 245678899999999875432 356788999999999987754
No 377
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=97.42 E-value=0.00067 Score=63.36 Aligned_cols=106 Identities=24% Similarity=0.196 Sum_probs=66.9
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHHHH---hCCCc--
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMVST---LGKNS-- 89 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~~~---l~~~v-- 89 (429)
++.++.++|+|+|. |.+|+++++.|+..+- -+++++|.+.- |.+.+++. +.+.+
T Consensus 6 ~~~L~~~~VlVvG~-GGvGs~va~~Lar~GV-g~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V 83 (231)
T cd00755 6 LEKLRNAHVAVVGL-GGVGSWAAEALARSGV-GKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEV 83 (231)
T ss_pred HHHHhCCCEEEECC-CHHHHHHHHHHHHcCC-CEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEE
Confidence 45578899999995 6699999999999743 28888886532 22222222 22233
Q ss_pred EEEEeeCCChHHHHHHhc-CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 90 EFAEVNIYNEGSLLMALR-DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 90 ~~~~~Dl~d~~~l~~~~~-~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
+.+...++ .+.+.+++. ++|+||.|...... ...+.+.|.+.++++|...+.
T Consensus 84 ~~~~~~i~-~~~~~~l~~~~~D~VvdaiD~~~~--k~~L~~~c~~~~ip~I~s~g~ 136 (231)
T cd00755 84 DAVEEFLT-PDNSEDLLGGDPDFVVDAIDSIRA--KVALIAYCRKRKIPVISSMGA 136 (231)
T ss_pred EEeeeecC-HhHHHHHhcCCCCEEEEcCCCHHH--HHHHHHHHHHhCCCEEEEeCC
Confidence 33333333 234555553 68899888764332 256778888888888866543
No 378
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=97.41 E-value=0.0012 Score=54.45 Aligned_cols=84 Identities=23% Similarity=0.236 Sum_probs=63.6
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEecCCCCC
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHAAGPFQ 120 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~agp~~ 120 (429)
|+|+| +|.+|+.+++.|.+. +.+|+++++++++.+.+.+. .+.++.+|.+|.+.++++ +++++.||-+.+--
T Consensus 1 vvI~G-~g~~~~~i~~~L~~~--~~~vvvid~d~~~~~~~~~~---~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d- 73 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLKEG--GIDVVVIDRDPERVEELREE---GVEVIYGDATDPEVLERAGIEKADAVVILTDDD- 73 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHT--TSEEEEEESSHHHHHHHHHT---TSEEEES-TTSHHHHHHTTGGCESEEEEESSSH-
T ss_pred eEEEc-CCHHHHHHHHHHHhC--CCEEEEEECCcHHHHHHHhc---ccccccccchhhhHHhhcCccccCEEEEccCCH-
Confidence 68898 588999999999995 67999999999988877653 478999999999988875 45899998776521
Q ss_pred CCchHHHHHHHHH
Q 014177 121 QAPKCTVLEAAIE 133 (429)
Q Consensus 121 ~~~~~~v~~aa~~ 133 (429)
..+..+...+.+
T Consensus 74 -~~n~~~~~~~r~ 85 (116)
T PF02254_consen 74 -EENLLIALLARE 85 (116)
T ss_dssp -HHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHH
Confidence 122444555555
No 379
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.40 E-value=0.00034 Score=71.03 Aligned_cols=75 Identities=20% Similarity=0.319 Sum_probs=59.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++.+++|+|+|+ |.+|+.+++.|.+.+ -.++++++|+.++++.+++.++. .. +...+++.+.+.++|+||+|
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~g-~~~I~V~nRt~~ra~~La~~~~~-~~-----~~~~~~l~~~l~~aDiVI~a 249 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTALA-PKQIMLANRTIEKAQKITSAFRN-AS-----AHYLSELPQLIKKADIIIAA 249 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHhcC-Ce-----EecHHHHHHHhccCCEEEEC
Confidence 467799999995 779999999999873 24899999999999999887642 11 22335567788899999999
Q ss_pred CCC
Q 014177 116 AGP 118 (429)
Q Consensus 116 agp 118 (429)
.+.
T Consensus 250 T~a 252 (414)
T PRK13940 250 VNV 252 (414)
T ss_pred cCC
Confidence 864
No 380
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.38 E-value=0.00091 Score=61.40 Aligned_cols=134 Identities=21% Similarity=0.175 Sum_probs=84.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+.+++|+|+|| |.+|..-++.|++. |.+|++++.+.. .++.+.+. .+++++..+... ..++++|+||-+
T Consensus 7 l~gk~vlVvGg-G~va~rk~~~Ll~~--ga~VtVvsp~~~~~l~~l~~~--~~i~~~~~~~~~-----~dl~~~~lVi~a 76 (205)
T TIGR01470 7 LEGRAVLVVGG-GDVALRKARLLLKA--GAQLRVIAEELESELTLLAEQ--GGITWLARCFDA-----DILEGAFLVIAA 76 (205)
T ss_pred cCCCeEEEECc-CHHHHHHHHHHHHC--CCEEEEEcCCCCHHHHHHHHc--CCEEEEeCCCCH-----HHhCCcEEEEEC
Confidence 67789999995 88999999999997 789999887654 33444332 367888777653 235789999977
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcE-EecCCCccchhHHHHHHHHH
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPA-ITTGGIYPGVSNVMAAELVR 185 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~-i~~~g~~pG~s~~~a~~~~~ 185 (429)
.+.... +..+.+.|.+.|+.+- ..++.+...- .+....+..++.+ +...|.+|.+++.+-+.+.+
T Consensus 77 t~d~~l--n~~i~~~a~~~~ilvn-~~d~~e~~~f--~~pa~~~~g~l~iaisT~G~sP~la~~lr~~ie~ 142 (205)
T TIGR01470 77 TDDEEL--NRRVAHAARARGVPVN-VVDDPELCSF--IFPSIVDRSPVVVAISSGGAAPVLARLLRERIET 142 (205)
T ss_pred CCCHHH--HHHHHHHHHHcCCEEE-ECCCcccCeE--EEeeEEEcCCEEEEEECCCCCcHHHHHHHHHHHH
Confidence 654211 2688889988886652 2323221110 0111111223333 34456778887776666554
No 381
>PRK06153 hypothetical protein; Provisional
Probab=97.37 E-value=0.00086 Score=66.56 Aligned_cols=103 Identities=16% Similarity=0.111 Sum_probs=63.8
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc----------------------hhHHHHHHHh---CCC
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR----------------------EKGAAMVSTL---GKN 88 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~----------------------~~~~~l~~~l---~~~ 88 (429)
++.++.++|+|+|+ |.+|+.++..|++.+- -+++++|.+. .|.+.+++.+ ..+
T Consensus 171 q~kL~~~~VaIVG~-GG~GS~Va~~LAR~GV-geI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~~in~~ 248 (393)
T PRK06153 171 SAKLEGQRIAIIGL-GGTGSYILDLVAKTPV-REIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYSNMRRG 248 (393)
T ss_pred HHHHhhCcEEEEcC-CccHHHHHHHHHHcCC-CEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHHHhCCe
Confidence 44567889999996 5599999999999742 3888887541 1222222222 123
Q ss_pred cEEEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 89 SEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 89 v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
+..+...+ +.+.+. .+.++|+||.|..-... -.-+.+.|.+.++++||++
T Consensus 249 I~~~~~~I-~~~n~~-~L~~~DiV~dcvDn~~a--R~~ln~~a~~~gIP~Id~G 298 (393)
T PRK06153 249 IVPHPEYI-DEDNVD-ELDGFTFVFVCVDKGSS--RKLIVDYLEALGIPFIDVG 298 (393)
T ss_pred EEEEeecC-CHHHHH-HhcCCCEEEEcCCCHHH--HHHHHHHHHHcCCCEEEee
Confidence 44444444 444443 45778888888764322 2345667777777777765
No 382
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=97.36 E-value=0.001 Score=60.78 Aligned_cols=108 Identities=19% Similarity=0.265 Sum_probs=70.0
Q ss_pred ccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch---------------------hHHHHHH---HhCC
Q 014177 32 HFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE---------------------KGAAMVS---TLGK 87 (429)
Q Consensus 32 ~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~---------------------~~~~l~~---~l~~ 87 (429)
..++.++.++|+|+|++| +|+.+++.|+..+. -+++++|.+.- |.+..++ ++.+
T Consensus 12 ~~q~~L~~s~VlviG~gg-lGsevak~L~~~GV-g~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp 89 (198)
T cd01485 12 EAQNKLRSAKVLIIGAGA-LGAEIAKNLVLAGI-DSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNP 89 (198)
T ss_pred HHHHHHhhCcEEEECCCH-HHHHHHHHHHHcCC-CEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCC
Confidence 345567889999999755 99999999999743 26888875421 1111122 2233
Q ss_pred CcEE--EEeeCCC-hHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCC
Q 014177 88 NSEF--AEVNIYN-EGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 88 ~v~~--~~~Dl~d-~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~ 143 (429)
.+++ +..++.+ .+...++++++|+||.|..+... ...+-+.|.+.+++++..+.
T Consensus 90 ~v~i~~~~~~~~~~~~~~~~~~~~~dvVi~~~d~~~~--~~~ln~~c~~~~ip~i~~~~ 146 (198)
T cd01485 90 NVKLSIVEEDSLSNDSNIEEYLQKFTLVIATEENYER--TAKVNDVCRKHHIPFISCAT 146 (198)
T ss_pred CCEEEEEecccccchhhHHHHHhCCCEEEECCCCHHH--HHHHHHHHHHcCCCEEEEEe
Confidence 3433 3334432 34456678899999988765322 24567889999999987653
No 383
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=97.36 E-value=0.0012 Score=66.19 Aligned_cols=105 Identities=25% Similarity=0.229 Sum_probs=71.1
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHHHHh---CCC--
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMVSTL---GKN-- 88 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~~~l---~~~-- 88 (429)
.++.++..+|+|+|+ |.+|+.+++.|+..+. -+++++|.+.- |.+.+++.+ .+.
T Consensus 35 ~q~~l~~~~VliiG~-GglG~~v~~~La~~Gv-g~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~ 112 (370)
T PRK05600 35 QQERLHNARVLVIGA-GGLGCPAMQSLASAGV-GTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIR 112 (370)
T ss_pred HHHHhcCCcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCe
Confidence 455677899999996 6699999999999742 38888886521 233333322 233
Q ss_pred cEEEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 89 SEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 89 v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
++.+...++ .+.+.++++++|+||.|...+.. ..-+-+.|.+.++++|..+
T Consensus 113 i~~~~~~i~-~~~~~~~~~~~DlVid~~Dn~~~--r~~in~~~~~~~iP~v~~~ 163 (370)
T PRK05600 113 VNALRERLT-AENAVELLNGVDLVLDGSDSFAT--KFLVADAAEITGTPLVWGT 163 (370)
T ss_pred eEEeeeecC-HHHHHHHHhCCCEEEECCCCHHH--HHHHHHHHHHcCCCEEEEE
Confidence 344444454 34577788999999999875432 1445678999999988543
No 384
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=97.35 E-value=0.0017 Score=61.28 Aligned_cols=104 Identities=18% Similarity=0.182 Sum_probs=69.6
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHHHH---hCCCc-
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMVST---LGKNS- 89 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~~~---l~~~v- 89 (429)
.++.++.++|+|+|+ |.+|+.+++.|+..+- -+++++|.+.- |.+.+++. +.+.+
T Consensus 26 ~Q~~L~~~~VliiG~-GglGs~va~~La~~Gv-g~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~ 103 (245)
T PRK05690 26 GQEKLKAARVLVVGL-GGLGCAASQYLAAAGV-GTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIA 103 (245)
T ss_pred HHHHhcCCeEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCE
Confidence 356678899999996 7799999999999743 27888875432 22222222 22333
Q ss_pred -EEEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEe
Q 014177 90 -EFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDV 141 (429)
Q Consensus 90 -~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdi 141 (429)
+.....++ .+.+.++++++|+||.|...+.. ...+-+.|.+.++++|..
T Consensus 104 i~~~~~~i~-~~~~~~~~~~~DiVi~~~D~~~~--r~~ln~~~~~~~ip~v~~ 153 (245)
T PRK05690 104 IETINARLD-DDELAALIAGHDLVLDCTDNVAT--RNQLNRACFAAKKPLVSG 153 (245)
T ss_pred EEEEeccCC-HHHHHHHHhcCCEEEecCCCHHH--HHHHHHHHHHhCCEEEEe
Confidence 33444443 34567788899999999865432 245677889999988864
No 385
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=97.34 E-value=0.0013 Score=59.93 Aligned_cols=105 Identities=16% Similarity=0.129 Sum_probs=67.5
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHHH---HhCCCc-
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMVS---TLGKNS- 89 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~~---~l~~~v- 89 (429)
.++.++.++|+|+|++| +|+.+++.|+..+- -+++++|.+.- |.+.+++ ++.+.+
T Consensus 15 ~Q~~L~~s~VlIiG~gg-lG~evak~La~~GV-g~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~ 92 (197)
T cd01492 15 AQKRLRSARILLIGLKG-LGAEIAKNLVLSGI-GSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVK 92 (197)
T ss_pred HHHHHHhCcEEEEcCCH-HHHHHHHHHHHcCC-CEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCE
Confidence 34567889999999655 99999999999742 27888875421 2222222 233333
Q ss_pred -EEEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCC
Q 014177 90 -EFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 90 -~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~ 143 (429)
+.....+.+ ...+.++++|+||.|...... ...+-+.|.+.+++++....
T Consensus 93 i~~~~~~~~~--~~~~~~~~~dvVi~~~~~~~~--~~~ln~~c~~~~ip~i~~~~ 143 (197)
T cd01492 93 VSVDTDDISE--KPEEFFSQFDVVVATELSRAE--LVKINELCRKLGVKFYATGV 143 (197)
T ss_pred EEEEecCccc--cHHHHHhCCCEEEECCCCHHH--HHHHHHHHHHcCCCEEEEEe
Confidence 333333332 245567899999988764322 25667889999999886553
No 386
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.33 E-value=0.0015 Score=66.72 Aligned_cols=97 Identities=24% Similarity=0.361 Sum_probs=66.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+.+++|+|+|+ |.+|+.+++.|... |. +|++++|+.++++.+++.++. . +.+.+++.+.+.++|+||.|
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~--G~~~V~v~~r~~~ra~~la~~~g~--~-----~~~~~~~~~~l~~aDvVI~a 249 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEK--GVRKITVANRTLERAEELAEEFGG--E-----AIPLDELPEALAEADIVISS 249 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHC--CCCeEEEEeCCHHHHHHHHHHcCC--c-----EeeHHHHHHHhccCCEEEEC
Confidence 56789999995 99999999999876 55 899999999998888877642 1 22234566777899999999
Q ss_pred CCCCCCCchHHHHHHHHHc----CCcEEEeCC
Q 014177 116 AGPFQQAPKCTVLEAAIET----KTAYIDVCD 143 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~----gv~~vdis~ 143 (429)
.+.....-+...++.+... ..-.+|++.
T Consensus 250 T~s~~~~i~~~~l~~~~~~~~~~~~vviDla~ 281 (423)
T PRK00045 250 TGAPHPIIGKGMVERALKARRHRPLLLVDLAV 281 (423)
T ss_pred CCCCCcEEcHHHHHHHHhhccCCCeEEEEeCC
Confidence 8643221113334444321 123567764
No 387
>PLN00203 glutamyl-tRNA reductase
Probab=97.32 E-value=0.0019 Score=67.28 Aligned_cols=101 Identities=22% Similarity=0.256 Sum_probs=68.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+..++|+|+|+ |.+|+.+++.|... |. +|++++|+.++++.+.+.++ .......+ .+++.+.+.++|+||.|
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~--G~~~V~V~nRs~era~~La~~~~-g~~i~~~~---~~dl~~al~~aDVVIsA 336 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSK--GCTKMVVVNRSEERVAALREEFP-DVEIIYKP---LDEMLACAAEADVVFTS 336 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhC--CCCeEEEEeCCHHHHHHHHHHhC-CCceEeec---HhhHHHHHhcCCEEEEc
Confidence 67899999996 99999999999986 54 79999999999999887764 22222223 34456778899999999
Q ss_pred CCCCCCCchHHHHHHHHHc----CC--cEEEeCCC
Q 014177 116 AGPFQQAPKCTVLEAAIET----KT--AYIDVCDD 144 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~----gv--~~vdis~~ 144 (429)
.+-....-....++.+... +. -.||++-.
T Consensus 337 T~s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvP 371 (519)
T PLN00203 337 TSSETPLFLKEHVEALPPASDTVGGKRLFVDISVP 371 (519)
T ss_pred cCCCCCeeCHHHHHHhhhcccccCCCeEEEEeCCC
Confidence 7532221113455554322 11 34677643
No 388
>PRK14852 hypothetical protein; Provisional
Probab=97.31 E-value=0.0016 Score=71.69 Aligned_cols=106 Identities=20% Similarity=0.217 Sum_probs=72.4
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHH---HHhCCCcEE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMV---STLGKNSEF 91 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~---~~l~~~v~~ 91 (429)
++.++..+|+|+|+ |.+|+.+++.|+..+-| +++++|.+.- |.+..+ .++++.+++
T Consensus 327 Q~kL~~srVlVvGl-GGlGs~ia~~LAraGVG-~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I 404 (989)
T PRK14852 327 QRRLLRSRVAIAGL-GGVGGIHLMTLARTGIG-NFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDI 404 (989)
T ss_pred HHHHhcCcEEEECC-cHHHHHHHHHHHHcCCC-eEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeE
Confidence 55678899999995 55999999999998543 7888775321 222222 233344444
Q ss_pred --EEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 92 --AEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 92 --~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
+...+ +.+.+.++++++|+||.|...+.......+.+.|.+.+++.|..+
T Consensus 405 ~~~~~~I-~~en~~~fl~~~DiVVDa~D~~~~~~rr~l~~~c~~~~IP~I~ag 456 (989)
T PRK14852 405 RSFPEGV-AAETIDAFLKDVDLLVDGIDFFALDIRRRLFNRALELGIPVITAG 456 (989)
T ss_pred EEEecCC-CHHHHHHHhhCCCEEEECCCCccHHHHHHHHHHHHHcCCCEEEee
Confidence 33344 446688899999999999865432112467788999999998654
No 389
>PRK14851 hypothetical protein; Provisional
Probab=97.30 E-value=0.0013 Score=70.68 Aligned_cols=107 Identities=21% Similarity=0.194 Sum_probs=72.8
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHHH---HhCC--C
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMVS---TLGK--N 88 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~~---~l~~--~ 88 (429)
.++.++.++|+|+|+ |.+|+.+++.|+..+-| +++++|.+.- |.+.+++ ++++ +
T Consensus 37 ~Q~kL~~~~VlIvG~-GGlGs~va~~Lar~GVG-~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~ 114 (679)
T PRK14851 37 EQERLAEAKVAIPGM-GGVGGVHLITMVRTGIG-RFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLE 114 (679)
T ss_pred HHHHHhcCeEEEECc-CHHHHHHHHHHHHhCCC-eEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCe
Confidence 355678899999995 66999999999998433 7888774321 2222222 2223 3
Q ss_pred cEEEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 89 SEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 89 v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
++.+...++ .+.+.++++++|+||+|...+.......+.+.|.+.++++|..+
T Consensus 115 I~~~~~~i~-~~n~~~~l~~~DvVid~~D~~~~~~r~~l~~~c~~~~iP~i~~g 167 (679)
T PRK14851 115 ITPFPAGIN-ADNMDAFLDGVDVVLDGLDFFQFEIRRTLFNMAREKGIPVITAG 167 (679)
T ss_pred EEEEecCCC-hHHHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHCCCCEEEee
Confidence 445555664 45678889999999999865432111457889999999998654
No 390
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=97.28 E-value=0.00084 Score=62.77 Aligned_cols=81 Identities=14% Similarity=0.135 Sum_probs=54.8
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCC--hHHHHHHhcCccE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYN--EGSLLMALRDVDL 111 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d--~~~l~~~~~~~Dv 111 (429)
.|.+.+-|.+=-.++|++|+++++.|+++ |++|++++|+..... ....+++++.++..+ .+.+.+.++++|+
T Consensus 11 ~e~iD~VR~itN~SSG~iG~aLA~~L~~~--G~~V~li~r~~~~~~----~~~~~v~~i~v~s~~~m~~~l~~~~~~~Di 84 (229)
T PRK06732 11 TEPIDSVRGITNHSTGQLGKIIAETFLAA--GHEVTLVTTKTAVKP----EPHPNLSIIEIENVDDLLETLEPLVKDHDV 84 (229)
T ss_pred ccccCCceeecCccchHHHHHHHHHHHhC--CCEEEEEECcccccC----CCCCCeEEEEEecHHHHHHHHHHHhcCCCE
Confidence 34455555555568999999999999998 899999887643210 001245666654332 2456666778999
Q ss_pred EEecCCCCC
Q 014177 112 VVHAAGPFQ 120 (429)
Q Consensus 112 Vi~~agp~~ 120 (429)
||||||...
T Consensus 85 vIh~AAvsd 93 (229)
T PRK06732 85 LIHSMAVSD 93 (229)
T ss_pred EEeCCccCC
Confidence 999998753
No 391
>PRK08328 hypothetical protein; Provisional
Probab=97.27 E-value=0.0018 Score=60.57 Aligned_cols=105 Identities=18% Similarity=0.193 Sum_probs=63.7
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHH-----------------------HHhCCCc
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMV-----------------------STLGKNS 89 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~-----------------------~~l~~~v 89 (429)
.++.++.++|+|+|+ |.+|+.+++.|+..+. -+++++|.+.-...++. +++.+.+
T Consensus 21 ~q~~L~~~~VlIiG~-GGlGs~ia~~La~~Gv-g~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v 98 (231)
T PRK08328 21 GQEKLKKAKVAVVGV-GGLGSPVAYYLAAAGV-GRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDI 98 (231)
T ss_pred HHHHHhCCcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCC
Confidence 456678899999996 6699999999999743 27888886532222221 1122222
Q ss_pred --EEEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 90 --EFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 90 --~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
+.....+ +.+.+.++++++|+||.|...+.. ...+-+.|.+.+++.|.-+
T Consensus 99 ~v~~~~~~~-~~~~~~~~l~~~D~Vid~~d~~~~--r~~l~~~~~~~~ip~i~g~ 150 (231)
T PRK08328 99 KIETFVGRL-SEENIDEVLKGVDVIVDCLDNFET--RYLLDDYAHKKGIPLVHGA 150 (231)
T ss_pred EEEEEeccC-CHHHHHHHHhcCCEEEECCCCHHH--HHHHHHHHHHcCCCEEEEe
Confidence 2223333 234456667778888877654321 1344556777777777543
No 392
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=97.26 E-value=0.0021 Score=61.64 Aligned_cols=124 Identities=22% Similarity=0.209 Sum_probs=77.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
.++++|+|+ |..+++++..|.+. +. +|++++|+.++++.+++.+. . +.. +.+. ..++|+||||..
T Consensus 122 ~~~vlilGa-GGaarAi~~aL~~~--g~~~i~i~nR~~~~a~~la~~~~--~-----~~~--~~~~--~~~~dlvINaTp 187 (272)
T PRK12550 122 DLVVALRGS-GGMAKAVAAALRDA--GFTDGTIVARNEKTGKALAELYG--Y-----EWR--PDLG--GIEADILVNVTP 187 (272)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHhC--C-----cch--hhcc--cccCCEEEECCc
Confidence 368999996 66999999999987 54 79999999999998887653 1 111 1111 246899999973
Q ss_pred C--CCCC--chHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHH
Q 014177 118 P--FQQA--PKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVA 187 (429)
Q Consensus 118 p--~~~~--~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~ 187 (429)
. .... ...++-...+..+.-.+|+...+ ...++-..+++.|..++.| -.++..+.+..+
T Consensus 188 ~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY~P----~~T~ll~~A~~~G~~~i~G-------l~MLi~Qa~~~f 250 (272)
T PRK12550 188 IGMAGGPEADKLAFPEAEIDAASVVFDVVALP----AETPLIRYARARGKTVITG-------AEVIALQAVEQF 250 (272)
T ss_pred cccCCCCccccCCCCHHHcCCCCEEEEeecCC----ccCHHHHHHHHCcCeEeCC-------HHHHHHHHHHHH
Confidence 2 1110 00123223344444556776544 2235667788888876544 245566666544
No 393
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=97.26 E-value=0.00082 Score=56.21 Aligned_cols=97 Identities=22% Similarity=0.234 Sum_probs=60.2
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHhCCCcE-EEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTLGKNSE-FAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l~~~v~-~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
++.|+|++|.+|..+++.|.+. +++++..+ +++.++.+.+.... +++. ....++. .+.+. ..++|+||-|.++
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~-~~~~l~av~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~--~~~~DvV~~~~~~ 75 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEH-PDFEVVALAASARSAGKRVSEAG-PHLKGEVVLELE-PEDFE--ELAVDIVFLALPH 75 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcC-CCceEEEEEechhhcCcCHHHHC-cccccccccccc-cCChh--hcCCCEEEEcCCc
Confidence 5889999999999999999884 57777766 55544444333322 2221 1122222 12232 2489999999875
Q ss_pred CCCCchHHH---HHHHHHcCCcEEEeCCCh
Q 014177 119 FQQAPKCTV---LEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 119 ~~~~~~~~v---~~aa~~~gv~~vdis~~~ 145 (429)
... ..+ +..+.+.|...||+++..
T Consensus 76 ~~~---~~~~~~~~~~~~~g~~viD~s~~~ 102 (122)
T smart00859 76 GVS---KEIAPLLPKAAEAGVKVIDLSSAF 102 (122)
T ss_pred HHH---HHHHHHHHhhhcCCCEEEECCccc
Confidence 432 232 234457888999998754
No 394
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=97.26 E-value=0.0021 Score=57.45 Aligned_cols=95 Identities=20% Similarity=0.250 Sum_probs=58.6
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCc------------------hhHHHHHHH---hCCC--cEEEEeeC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNR------------------EKGAAMVST---LGKN--SEFAEVNI 96 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~------------------~~~~~l~~~---l~~~--v~~~~~Dl 96 (429)
+|+|+|+ |.+|+.+++.|+.. |. +++++|.+. .|.+...+. +.+. ++.....+
T Consensus 1 ~VlViG~-GglGs~ia~~La~~--Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~ 77 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARS--GVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKI 77 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHc--CCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeec
Confidence 5899995 66999999999997 55 699998765 122222222 2222 33333444
Q ss_pred CChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHc-CCcEEEe
Q 014177 97 YNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIET-KTAYIDV 141 (429)
Q Consensus 97 ~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~-gv~~vdi 141 (429)
+. +.+.++++++|+||.|...... ...+.+.|.+. ++++|.-
T Consensus 78 ~~-~~~~~~l~~~DlVi~~~d~~~~--r~~i~~~~~~~~~ip~i~~ 120 (174)
T cd01487 78 DE-NNLEGLFGDCDIVVEAFDNAET--KAMLAESLLGNKNKPVVCA 120 (174)
T ss_pred Ch-hhHHHHhcCCCEEEECCCCHHH--HHHHHHHHHHHCCCCEEEE
Confidence 33 4566778888888888643321 12355666665 7776643
No 395
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.26 E-value=0.0027 Score=65.41 Aligned_cols=97 Identities=16% Similarity=0.172 Sum_probs=73.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~ 115 (429)
..+++++|+|+ |.+|+.+++.|.+. +++++++++++++.+.+.+.. ..+..+.+|.++.+.+.++ ++++|.||-+
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~--~~~v~vid~~~~~~~~~~~~~-~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~ 304 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKE--GYSVKLIERDPERAEELAEEL-PNTLVLHGDGTDQELLEEEGIDEADAFIAL 304 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHC-CCCeEEECCCCCHHHHHhcCCccCCEEEEC
Confidence 45689999995 99999999999986 789999999999888776654 2467899999999888654 5689999977
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEE
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYI 139 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~v 139 (429)
.+-. ..+..+...|.+.+...+
T Consensus 305 ~~~~--~~n~~~~~~~~~~~~~~i 326 (453)
T PRK09496 305 TNDD--EANILSSLLAKRLGAKKV 326 (453)
T ss_pred CCCc--HHHHHHHHHHHHhCCCeE
Confidence 6422 112334445666776654
No 396
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.25 E-value=0.0027 Score=58.12 Aligned_cols=134 Identities=22% Similarity=0.285 Sum_probs=78.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
++.+++|+|+|| |-+|...++.|++. +.+|++++++.. .+..+... ..+.+..-++. ...+.++|+||-
T Consensus 7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~--ga~V~VIs~~~~~~l~~l~~~--~~i~~~~~~~~-----~~~l~~adlVia 76 (202)
T PRK06718 7 DLSNKRVVIVGG-GKVAGRRAITLLKY--GAHIVVISPELTENLVKLVEE--GKIRWKQKEFE-----PSDIVDAFLVIA 76 (202)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHHC--CCeEEEEcCCCCHHHHHHHhC--CCEEEEecCCC-----hhhcCCceEEEE
Confidence 467899999996 88999999999997 789999887542 23333322 23555443332 223678999998
Q ss_pred cCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcE-EecCCCccchhHHHHHHHHH
Q 014177 115 AAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPA-ITTGGIYPGVSNVMAAELVR 185 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~-i~~~g~~pG~s~~~a~~~~~ 185 (429)
+.+.... +..+.+.| +.++ .+...++.....-. +....+..++.+ +...|.+|.+++.+-+.+-.
T Consensus 77 aT~d~el--N~~i~~~a-~~~~-lvn~~d~~~~~~f~--~Pa~~~~g~l~iaIsT~G~sP~la~~lr~~ie~ 142 (202)
T PRK06718 77 ATNDPRV--NEQVKEDL-PENA-LFNVITDAESGNVV--FPSALHRGKLTISVSTDGASPKLAKKIRDELEA 142 (202)
T ss_pred cCCCHHH--HHHHHHHH-HhCC-cEEECCCCccCeEE--EeeEEEcCCeEEEEECCCCChHHHHHHHHHHHH
Confidence 8653221 25677777 4554 45555444321100 111111223333 33456678777766555554
No 397
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=97.23 E-value=0.00024 Score=65.32 Aligned_cols=147 Identities=13% Similarity=0.085 Sum_probs=98.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-----hHHHHHHH----hCCCcEEEEeeCCChHHHHHHhc--
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-----KGAAMVST----LGKNSEFAEVNIYNEGSLLMALR-- 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-----~~~~l~~~----l~~~v~~~~~Dl~d~~~l~~~~~-- 107 (429)
.|..||+|-+|.=|+.+++.|+.. |++|...-|+.. +.+.+... .+.......+|++|...|.+++.
T Consensus 28 rkvALITGItGQDGSYLaEfLL~K--gYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i 105 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSK--GYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI 105 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhC--CceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc
Confidence 356899999999999999999997 899987776544 33333211 11357788999999999988887
Q ss_pred CccEEEecCCCCCC---------------CchHHHHHHHHHc----CCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEec
Q 014177 108 DVDLVVHAAGPFQQ---------------APKCTVLEAAIET----KTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITT 168 (429)
Q Consensus 108 ~~DvVi~~agp~~~---------------~~~~~v~~aa~~~----gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~ 168 (429)
+++-|+|+|+..+. .|++++++|.... ++++...+++. .+....+... ..-.+..+-
T Consensus 106 kPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSE-lyGkv~e~PQ---sE~TPFyPR 181 (376)
T KOG1372|consen 106 KPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSE-LYGKVQEIPQ---SETTPFYPR 181 (376)
T ss_pred CchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHh-hcccccCCCc---ccCCCCCCC
Confidence 78889999976542 3678888876554 45566555443 3332222211 112344443
Q ss_pred CCCccchhHHHHHHHHHHHHhhcCC
Q 014177 169 GGIYPGVSNVMAAELVRVARNESKG 193 (429)
Q Consensus 169 ~g~~pG~s~~~a~~~~~~~~~~~~~ 193 (429)
+.|+++|+.+.|++-.|++.++.
T Consensus 182 --SPYa~aKmy~~WivvNyREAYnm 204 (376)
T KOG1372|consen 182 --SPYAAAKMYGYWIVVNYREAYNM 204 (376)
T ss_pred --ChhHHhhhhheEEEEEhHHhhcc
Confidence 44888999888887766655543
No 398
>PRK07877 hypothetical protein; Provisional
Probab=97.22 E-value=0.0012 Score=71.13 Aligned_cols=105 Identities=19% Similarity=0.143 Sum_probs=72.9
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch------------------hHHHHHHH---hCCC--cE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE------------------KGAAMVST---LGKN--SE 90 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~------------------~~~~l~~~---l~~~--v~ 90 (429)
++.++.++|+|+|+ | +|+.++..|+..+-.-+++++|.+.- |.+..++. +++. ++
T Consensus 102 Q~~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~ 179 (722)
T PRK07877 102 QERLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVE 179 (722)
T ss_pred HHHHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEE
Confidence 55678899999998 8 99999999998731028888886421 22222222 2233 44
Q ss_pred EEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCC
Q 014177 91 FAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 91 ~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~ 143 (429)
.+...++ .+.+.++++++|+||.|..-+.. -.-+-++|.+.+++.|.-++
T Consensus 180 ~~~~~i~-~~n~~~~l~~~DlVvD~~D~~~~--R~~ln~~a~~~~iP~i~~~~ 229 (722)
T PRK07877 180 VFTDGLT-EDNVDAFLDGLDVVVEECDSLDV--KVLLREAARARRIPVLMATS 229 (722)
T ss_pred EEeccCC-HHHHHHHhcCCCEEEECCCCHHH--HHHHHHHHHHcCCCEEEEcC
Confidence 5555555 56788999999999999875532 25667899999999886553
No 399
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.22 E-value=0.0015 Score=61.35 Aligned_cols=127 Identities=14% Similarity=0.010 Sum_probs=75.7
Q ss_pred HHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc----CccEEEecCCCCCC---------
Q 014177 55 TAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR----DVDLVVHAAGPFQQ--------- 121 (429)
Q Consensus 55 l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~----~~DvVi~~agp~~~--------- 121 (429)
+++.|+++ |++|++++|+.++.+ ...++++|++|.++++++++ ++|+|||+||....
T Consensus 1 ~a~~l~~~--G~~Vv~~~r~~~~~~--------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~v 70 (241)
T PRK12428 1 TARLLRFL--GARVIGVDRREPGMT--------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARV 70 (241)
T ss_pred ChHHHHhC--CCEEEEEeCCcchhh--------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhh
Confidence 46788887 899999999877642 13467899999999988876 58999999986421
Q ss_pred --CchHHHHHHHHHc---CCcEEEeCCChhHHHH-HHhhHHH-HH----HcC---CcEEecCC-CccchhHHHHHHHHHH
Q 014177 122 --APKCTVLEAAIET---KTAYIDVCDDTIYSQR-AKSFKDR-AI----AAN---IPAITTGG-IYPGVSNVMAAELVRV 186 (429)
Q Consensus 122 --~~~~~v~~aa~~~---gv~~vdis~~~~~~~~-~~~~~~~-a~----~~g---~~~i~~~g-~~pG~s~~~a~~~~~~ 186 (429)
.+...+.+++... +.+.|.+++...+... .....+. .. ..+ ....+..+ ..|+.||.....+.+.
T Consensus 71 N~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~ 150 (241)
T PRK12428 71 NFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMR 150 (241)
T ss_pred chHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHH
Confidence 2344566666543 3355666654433100 0000000 00 000 00001112 3499999999888887
Q ss_pred HH-hhc
Q 014177 187 AR-NES 191 (429)
Q Consensus 187 ~~-~~~ 191 (429)
+. .++
T Consensus 151 la~~e~ 156 (241)
T PRK12428 151 QAQPWF 156 (241)
T ss_pred HHHHhh
Confidence 76 444
No 400
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.21 E-value=0.0042 Score=61.82 Aligned_cols=96 Identities=19% Similarity=0.237 Sum_probs=60.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCce---EEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQ---IVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~---v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
|++|.|+||+|++|+.+.+.|+++ ++++ +.....+.. .... ..+.+ -.....++.|.+. ++++|+||.+
T Consensus 1 m~~VAIVGATG~vG~ell~llL~~-~~f~~~~l~~~ss~~s-g~~~-~~f~g-~~~~v~~~~~~~~----~~~~Divf~a 72 (369)
T PRK06598 1 MKKVGFVGWRGMVGSVLMQRMVEE-NDFDLIEPVFFSTSQA-GGAA-PSFGG-KEGTLQDAFDIDA----LKKLDIIITC 72 (369)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHhC-CCCCcCcEEEecchhh-CCcc-cccCC-CcceEEecCChhH----hcCCCEEEEC
Confidence 368999999999999999977663 5666 665443211 1111 11212 1234455554433 3689999998
Q ss_pred CCCCCCCchHHHHHHHHHcCCc--EEEeCCCh
Q 014177 116 AGPFQQAPKCTVLEAAIETKTA--YIDVCDDT 145 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~--~vdis~~~ 145 (429)
++... ...+...+.++|++ .||.+++-
T Consensus 73 ~~~~~---s~~~~~~~~~aG~~~~VID~Ss~f 101 (369)
T PRK06598 73 QGGDY---TNEVYPKLRAAGWQGYWIDAASTL 101 (369)
T ss_pred CCHHH---HHHHHHHHHhCCCCeEEEECChHH
Confidence 86432 25677778889965 78888654
No 401
>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=97.19 E-value=0.0018 Score=64.18 Aligned_cols=101 Identities=23% Similarity=0.189 Sum_probs=66.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHhCCC--------cE-EEEeeCCChHHHHHHhcC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTLGKN--------SE-FAEVNIYNEGSLLMALRD 108 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l~~~--------v~-~~~~Dl~d~~~l~~~~~~ 108 (429)
|.||.|.|. |.+|+.+++.+.++ ++++++.+ +++++....++...+-. .+ +...++.-.....+++.+
T Consensus 1 ~ikVaI~G~-GrIGr~va~al~~~-~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el~~~ 78 (341)
T PRK04207 1 MIKVGVNGY-GTIGKRVADAVAAQ-PDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDLLEK 78 (341)
T ss_pred CeEEEEECC-CHHHHHHHHHHhcC-CCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhHhhcc
Confidence 468999996 99999999998874 78887765 44554445444432100 00 000001001124455678
Q ss_pred ccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 109 VDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 109 ~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
+|+||.|++++.. ...++.++++|++.|+-++.
T Consensus 79 vDVVIdaT~~~~~---~e~a~~~~~aGk~VI~~~~~ 111 (341)
T PRK04207 79 ADIVVDATPGGVG---AKNKELYEKAGVKAIFQGGE 111 (341)
T ss_pred CCEEEECCCchhh---HHHHHHHHHCCCEEEEcCCC
Confidence 9999999987654 67888999999888877764
No 402
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=97.19 E-value=0.004 Score=58.05 Aligned_cols=111 Identities=16% Similarity=0.243 Sum_probs=68.8
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCc---eEEEEecC----chhH-------HHHHHHhCCCcEEEEeeCCChH
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDL---QIVVGSRN----REKG-------AAMVSTLGKNSEFAEVNIYNEG 100 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~---~v~v~~R~----~~~~-------~~l~~~l~~~v~~~~~Dl~d~~ 100 (429)
.++.+++|+|+|+ |..|+.+++.|.+. |. ++.++||+ .++. +.+.+.... . ..+ .
T Consensus 21 ~~l~~~rvlvlGA-GgAg~aiA~~L~~~--G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~--~--~~~----~ 89 (226)
T cd05311 21 KKIEEVKIVINGA-GAAGIAIARLLLAA--GAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNP--E--KTG----G 89 (226)
T ss_pred CCccCCEEEEECc-hHHHHHHHHHHHHc--CcCcceEEEEeCCCccccccchhhhHHHHHHHHHhcc--C--ccc----C
Confidence 3577789999996 77999999999886 55 69999998 4443 223332211 0 111 1
Q ss_pred HHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCc
Q 014177 101 SLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIP 164 (429)
Q Consensus 101 ~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~ 164 (429)
++.+.++++|+|||+.++... . ...++...+..+. +|++ .+. ...+.+.+++.|..
T Consensus 90 ~l~~~l~~~dvlIgaT~~G~~-~-~~~l~~m~~~~iv-f~ls-nP~----~e~~~~~A~~~ga~ 145 (226)
T cd05311 90 TLKEALKGADVFIGVSRPGVV-K-KEMIKKMAKDPIV-FALA-NPV----PEIWPEEAKEAGAD 145 (226)
T ss_pred CHHHHHhcCCEEEeCCCCCCC-C-HHHHHhhCCCCEE-EEeC-CCC----CcCCHHHHHHcCCc
Confidence 355566789999999874332 2 3445544333333 3665 332 23566777777775
No 403
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=97.19 E-value=0.0012 Score=61.16 Aligned_cols=74 Identities=30% Similarity=0.361 Sum_probs=52.4
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC-----CcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK-----NSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~-----~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
|+|.|+||+|.+|+.++..|.+. +++|++.+|++++.+.+.+.... .+.. ..-..+ ..+.++++|+||-
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~--G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~-~~~~~~---~~ea~~~aDvVil 74 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKA--GNKIIIGSRDLEKAEEAAAKALEELGHGGSDI-KVTGAD---NAEAAKRADVVIL 74 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC--CCEEEEEEcCHHHHHHHHHHHHhhccccCCCc-eEEEeC---hHHHHhcCCEEEE
Confidence 47999998999999999999987 78999999999888776653211 1100 011112 2345678999998
Q ss_pred cCCCC
Q 014177 115 AAGPF 119 (429)
Q Consensus 115 ~agp~ 119 (429)
++.+.
T Consensus 75 avp~~ 79 (219)
T TIGR01915 75 AVPWD 79 (219)
T ss_pred ECCHH
Confidence 87653
No 404
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.15 E-value=0.0013 Score=64.75 Aligned_cols=69 Identities=13% Similarity=0.122 Sum_probs=49.3
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCC-----CceEEEEecCc--hhHHHHHHHhCCCcEEEEeeCCCh-----------HHH
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCP-----DLQIVVGSRNR--EKGAAMVSTLGKNSEFAEVNIYNE-----------GSL 102 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~-----g~~v~v~~R~~--~~~~~l~~~l~~~v~~~~~Dl~d~-----------~~l 102 (429)
+|.|+||+|.||+.++..|..++- ..++++.|++. ++++. ...|+.|. ...
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g-----------~~~Dl~d~~~~~~~~~~i~~~~ 70 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEG-----------VVMELQDCAFPLLKGVVITTDP 70 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccce-----------eeeehhhhcccccCCcEEecCh
Confidence 799999999999999999987521 22599999987 44332 22333332 234
Q ss_pred HHHhcCccEEEecCCCCC
Q 014177 103 LMALRDVDLVVHAAGPFQ 120 (429)
Q Consensus 103 ~~~~~~~DvVi~~agp~~ 120 (429)
.+.++++|+||++||...
T Consensus 71 ~~~~~~aDiVVitAG~~~ 88 (323)
T cd00704 71 EEAFKDVDVAILVGAFPR 88 (323)
T ss_pred HHHhCCCCEEEEeCCCCC
Confidence 577889999999998644
No 405
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.15 E-value=0.0037 Score=63.84 Aligned_cols=97 Identities=22% Similarity=0.326 Sum_probs=67.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCC-ceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPD-LQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g-~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+.+++|+|+|+ |.+|..+++.|... | .+|++.+|+.++++.+++.++. ..+ + .+++.+.+.++|+||.|
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~~--G~~~V~v~~rs~~ra~~la~~~g~--~~i--~---~~~l~~~l~~aDvVi~a 247 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLRK--GVGKILIANRTYERAEDLAKELGG--EAV--K---FEDLEEYLAEADIVISS 247 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHcCC--eEe--e---HHHHHHHHhhCCEEEEC
Confidence 66789999995 99999999999886 5 6899999999988888776642 222 2 24567778899999999
Q ss_pred CCCCCCCchHHHHHHHHHcC-C--cEEEeCC
Q 014177 116 AGPFQQAPKCTVLEAAIETK-T--AYIDVCD 143 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~g-v--~~vdis~ 143 (429)
.+.....-+...++.+...+ . -.+|++.
T Consensus 248 T~s~~~ii~~e~l~~~~~~~~~~~~viDla~ 278 (417)
T TIGR01035 248 TGAPHPIVSKEDVERALRERTRPLFIIDIAV 278 (417)
T ss_pred CCCCCceEcHHHHHHHHhcCCCCeEEEEeCC
Confidence 86332211134455544322 2 3467764
No 406
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.14 E-value=0.003 Score=55.24 Aligned_cols=70 Identities=31% Similarity=0.420 Sum_probs=47.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+.+|+++|+| +|.+|+.+++.|... |.+|++.+.++-++-+ ... +.++.. .++++++.+|++|.+.
T Consensus 21 l~Gk~vvV~G-YG~vG~g~A~~lr~~--Ga~V~V~e~DPi~alq--A~~-dGf~v~--------~~~~a~~~adi~vtaT 86 (162)
T PF00670_consen 21 LAGKRVVVIG-YGKVGKGIARALRGL--GARVTVTEIDPIRALQ--AAM-DGFEVM--------TLEEALRDADIFVTAT 86 (162)
T ss_dssp -TTSEEEEE---SHHHHHHHHHHHHT--T-EEEEE-SSHHHHHH--HHH-TT-EEE---------HHHHTTT-SEEEE-S
T ss_pred eCCCEEEEeC-CCcccHHHHHHHhhC--CCEEEEEECChHHHHH--hhh-cCcEec--------CHHHHHhhCCEEEECC
Confidence 6789999999 999999999999997 8999999998865332 222 234332 2567888999999998
Q ss_pred CCCC
Q 014177 117 GPFQ 120 (429)
Q Consensus 117 gp~~ 120 (429)
|...
T Consensus 87 G~~~ 90 (162)
T PF00670_consen 87 GNKD 90 (162)
T ss_dssp SSSS
T ss_pred CCcc
Confidence 8643
No 407
>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]
Probab=97.12 E-value=0.0047 Score=56.88 Aligned_cols=103 Identities=17% Similarity=0.159 Sum_probs=73.2
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHH--------------HhC-CCcEEEEe---eCCCh--
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVS--------------TLG-KNSEFAEV---NIYNE-- 99 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~--------------~l~-~~v~~~~~---Dl~d~-- 99 (429)
|++.++| -|.+|..++++|.++ +++++..|+|++..+.++. .++ +++-|+-+ |++|.
T Consensus 1 M~iGmiG-LGrMG~n~v~rl~~~--ghdvV~yD~n~~av~~~~~~ga~~a~sl~el~~~L~~pr~vWlMvPag~it~~vi 77 (300)
T COG1023 1 MQIGMIG-LGRMGANLVRRLLDG--GHDVVGYDVNQTAVEELKDEGATGAASLDELVAKLSAPRIVWLMVPAGDITDAVI 77 (300)
T ss_pred Ccceeec-cchhhHHHHHHHHhC--CCeEEEEcCCHHHHHHHHhcCCccccCHHHHHHhcCCCcEEEEEccCCCchHHHH
Confidence 4677888 799999999999997 8999999999876555443 333 45555543 45552
Q ss_pred HHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChh
Q 014177 100 GSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTI 146 (429)
Q Consensus 100 ~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~ 146 (429)
+.+...+..-|+||.--..+ ...+.+-.+...+.|+||+|+..+..
T Consensus 78 ~~la~~L~~GDivIDGGNS~-y~Ds~rr~~~l~~kgi~flD~GTSGG 123 (300)
T COG1023 78 DDLAPLLSAGDIVIDGGNSN-YKDSLRRAKLLAEKGIHFLDVGTSGG 123 (300)
T ss_pred HHHHhhcCCCCEEEECCccc-hHHHHHHHHHHHhcCCeEEeccCCCC
Confidence 45666677889999864322 22335556667889999999987654
No 408
>COG3804 Uncharacterized conserved protein related to dihydrodipicolinate reductase [Function unknown]
Probab=97.11 E-value=0.01 Score=55.75 Aligned_cols=139 Identities=17% Similarity=0.184 Sum_probs=84.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
.+++++.| +|.+|.+.++.|.+ .|+++++.+ +++..|.-+-..++....+.-..+-++.+..-. ....+++++...
T Consensus 2 ~~~vvqyG-tG~vGv~air~l~a-kpe~elvgawv~s~ak~Gkdlgelagl~dlgV~a~~~~~avlA-tl~~~~~y~~~~ 78 (350)
T COG3804 2 SLRVVQYG-TGSVGVAAIRGLLA-KPELELVGAWVHSAAKSGKDLGELAGLPDLGVIATNSIDAVLA-TLADAVIYAPLL 78 (350)
T ss_pred CceeEEec-cchHHHHHHHHHHc-CCCCceEEEEecCcccccccHHHhcCCCCceeEeeccccccee-ccccceeeeccc
Confidence 36899998 89999999999998 478988764 666655333223332222222222222221111 112344444433
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEeCCChhH-----HHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHH
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDVCDDTIY-----SQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVR 185 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdis~~~~~-----~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~ 185 (429)
|. ..-.+.|+++|++.|-.+....| -.......+.+.++|..-+.+.|..||.++-+.-.+..
T Consensus 79 ~~-----~~~y~rlL~aGiNVv~~g~~l~yPw~~~PelaeKpl~lAaraGn~Tl~gtGI~pGF~~dllpmlLs 146 (350)
T COG3804 79 PS-----VDEYARLLRAGINVVTPGPVLQYPWFYPPELAEKPLELAARAGNATLHGTGIGPGFVTDLLPMLLS 146 (350)
T ss_pred ch-----HHHHHHHHHcCCceeccCccccCCCcCChHHhhchHHHHHhcCCceEEecccCccHHHHHHHHHHc
Confidence 31 45678899999999855433221 12344567778889998899999999987766655553
No 409
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.10 E-value=0.0031 Score=64.92 Aligned_cols=92 Identities=25% Similarity=0.229 Sum_probs=60.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhc-CccEEEe
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALR-DVDLVVH 114 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~-~~DvVi~ 114 (429)
+.+++|+|+|++| +|.++++.|++. |++|++.|++........+.+. ..+++...+ +... .+. ++|+||+
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~--G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~--~~~~---~~~~~~d~vV~ 74 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKL--GANVTVNDGKPFSENPEAQELLEEGIKVICGS--HPLE---LLDEDFDLMVK 74 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHC--CCEEEEEcCCCccchhHHHHHHhcCCEEEeCC--CCHH---HhcCcCCEEEE
Confidence 5678999999876 999999999997 8999999986543222222221 123333222 2222 233 4999999
Q ss_pred cCCCCCCCchHHHHHHHHHcCCcEE
Q 014177 115 AAGPFQQAPKCTVLEAAIETKTAYI 139 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~gv~~v 139 (429)
..|.... .+++++|.+.|++.+
T Consensus 75 s~gi~~~---~~~~~~a~~~~i~v~ 96 (447)
T PRK02472 75 NPGIPYT---NPMVEKALEKGIPII 96 (447)
T ss_pred CCCCCCC---CHHHHHHHHCCCcEE
Confidence 9876543 467788888777654
No 410
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=97.09 E-value=0.0012 Score=65.08 Aligned_cols=71 Identities=15% Similarity=0.144 Sum_probs=48.6
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCC-----CceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChH-----------HHHH
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCP-----DLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEG-----------SLLM 104 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~-----g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~-----------~l~~ 104 (429)
+|.|+|++|.||+.++..|...+- .+++++.|+++... ..+....|+.|.. ...+
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~---------~a~g~~~Dl~d~~~~~~~~~~~~~~~~~ 71 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK---------VLEGVVMELMDCAFPLLDGVVPTHDPAV 71 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc---------ccceeEeehhcccchhcCceeccCChHH
Confidence 589999989999999999986421 12699999865430 1222333444332 2356
Q ss_pred HhcCccEEEecCCCCC
Q 014177 105 ALRDVDLVVHAAGPFQ 120 (429)
Q Consensus 105 ~~~~~DvVi~~agp~~ 120 (429)
.++++|+||++||...
T Consensus 72 ~~~~aDiVVitAG~~~ 87 (324)
T TIGR01758 72 AFTDVDVAILVGAFPR 87 (324)
T ss_pred HhCCCCEEEEcCCCCC
Confidence 7889999999998643
No 411
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=97.06 E-value=0.011 Score=54.27 Aligned_cols=81 Identities=16% Similarity=0.229 Sum_probs=60.8
Q ss_pred CCCCCeEEEEcCC--hHHHHHHHHHHhHcCCCceEEEEecCc---hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---
Q 014177 36 KNRNARVLVLGGT--GRVGGSTAVALSKLCPDLQIVVGSRNR---EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~--G~iG~~l~~~L~~~~~g~~v~v~~R~~---~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
.+.+|++||+|-. -.|+-.|++.|.++ |.++.....++ .+.+.++++++ .....+||+++.+++++++.
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~--GAeL~fTy~~e~l~krv~~la~~~~-s~~v~~cDV~~d~~i~~~f~~i~ 79 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQ--GAELAFTYQGERLEKRVEELAEELG-SDLVLPCDVTNDESIDALFATIK 79 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHc--CCEEEEEeccHHHHHHHHHHHhhcc-CCeEEecCCCCHHHHHHHHHHHH
Confidence 3778999999943 35888899999998 88888765544 23344444443 24578999999998888775
Q ss_pred ----CccEEEecCCCC
Q 014177 108 ----DVDLVVHAAGPF 119 (429)
Q Consensus 108 ----~~DvVi~~agp~ 119 (429)
+.|.++|+.+..
T Consensus 80 ~~~g~lD~lVHsIaFa 95 (259)
T COG0623 80 KKWGKLDGLVHSIAFA 95 (259)
T ss_pred HhhCcccEEEEEeccC
Confidence 689999998754
No 412
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=97.06 E-value=0.0044 Score=59.93 Aligned_cols=99 Identities=19% Similarity=0.254 Sum_probs=67.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchh-HHHHHHHhCCCcEEEEeeCCChHHHHHH--hcCccEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREK-GAAMVSTLGKNSEFAEVNIYNEGSLLMA--LRDVDLV 112 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~-~~~l~~~l~~~v~~~~~Dl~d~~~l~~~--~~~~DvV 112 (429)
|++.+|.|+| +|.+|...+..+.+ .++.++. ++|+++++ ..+.+++++ +.. -..+.+.+-+. +.++|+|
T Consensus 2 m~klrVAIIG-tG~IGt~hm~~l~~-~~~velvAVvdid~es~gla~A~~~G--i~~---~~~~ie~LL~~~~~~dIDiV 74 (302)
T PRK08300 2 MSKLKVAIIG-SGNIGTDLMIKILR-SEHLEPGAMVGIDPESDGLARARRLG--VAT---SAEGIDGLLAMPEFDDIDIV 74 (302)
T ss_pred CCCCeEEEEc-CcHHHHHHHHHHhc-CCCcEEEEEEeCChhhHHHHHHHHcC--CCc---ccCCHHHHHhCcCCCCCCEE
Confidence 4567899999 89999998888877 4677776 46777763 224444443 211 12344444332 2579999
Q ss_pred EecCCCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 113 VHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 113 i~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
+.+++.... ......+.++|++.+|.+...
T Consensus 75 f~AT~a~~H---~e~a~~a~eaGk~VID~sPA~ 104 (302)
T PRK08300 75 FDATSAGAH---VRHAAKLREAGIRAIDLTPAA 104 (302)
T ss_pred EECCCHHHH---HHHHHHHHHcCCeEEECCccc
Confidence 999876433 677888999999999987544
No 413
>PRK11579 putative oxidoreductase; Provisional
Probab=97.05 E-value=0.021 Score=56.79 Aligned_cols=144 Identities=16% Similarity=0.101 Sum_probs=83.1
Q ss_pred CCeEEEEcCChHHHH-HHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEe
Q 014177 39 NARVLVLGGTGRVGG-STAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVH 114 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~-~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~ 114 (429)
+.+|.|+| +|.+|+ ..+..+.+ .++++++ +++++.++.. +.++ .... ..| ++++++ ++|+|+.
T Consensus 4 ~irvgiiG-~G~i~~~~~~~~~~~-~~~~~l~av~d~~~~~~~---~~~~-~~~~----~~~---~~ell~~~~vD~V~I 70 (346)
T PRK11579 4 KIRVGLIG-YGYASKTFHAPLIAG-TPGLELAAVSSSDATKVK---ADWP-TVTV----VSE---PQHLFNDPNIDLIVI 70 (346)
T ss_pred cceEEEEC-CCHHHHHHHHHHHhh-CCCCEEEEEECCCHHHHH---hhCC-CCce----eCC---HHHHhcCCCCCEEEE
Confidence 36899999 588997 45666665 4678776 4677765543 2221 1111 133 455564 6899999
Q ss_pred cCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCC
Q 014177 115 AAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGE 194 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~ 194 (429)
|..+... ..++..|+++|.|.+-=---.........+.+.++++|+.+.++--.-+...-..++.+++. -...+
T Consensus 71 ~tp~~~H---~~~~~~al~aGkhVl~EKPla~t~~ea~~l~~~a~~~g~~l~v~~~~R~~p~~~~~k~~i~~---g~iG~ 144 (346)
T PRK11579 71 PTPNDTH---FPLAKAALEAGKHVVVDKPFTVTLSQARELDALAKSAGRVLSVFHNRRWDSDFLTLKALLAE---GVLGE 144 (346)
T ss_pred cCCcHHH---HHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEeeccCCHHHHHHHHHHhc---CCCCC
Confidence 9765443 68889999999887621000011234446667788888877655332222222233444432 23445
Q ss_pred CeEEEEE
Q 014177 195 PERLRFS 201 (429)
Q Consensus 195 v~~i~~~ 201 (429)
+..++..
T Consensus 145 i~~~~~~ 151 (346)
T PRK11579 145 VAYFESH 151 (346)
T ss_pred eEEEEEE
Confidence 5555543
No 414
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=97.05 E-value=0.0048 Score=60.05 Aligned_cols=92 Identities=21% Similarity=0.143 Sum_probs=61.1
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+|.|+| .|.+|+.+++.|.+. +++|++.+|++++.+.+.+.- .. ...+.+++.+.++++|+||-|..+.
T Consensus 1 M~Ig~IG-lG~mG~~la~~L~~~--g~~V~~~dr~~~~~~~l~~~g---~~----~~~s~~~~~~~~~~~dvIi~~vp~~ 70 (298)
T TIGR00872 1 MQLGLIG-LGRMGANIVRRLAKR--GHDCVGYDHDQDAVKAMKEDR---TT----GVANLRELSQRLSAPRVVWVMVPHG 70 (298)
T ss_pred CEEEEEc-chHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHcC---Cc----ccCCHHHHHhhcCCCCEEEEEcCch
Confidence 4799999 699999999999986 799999999999888776521 11 1134455555566788888887543
Q ss_pred CCCchHHHHHHHH---HcCCcEEEeCCC
Q 014177 120 QQAPKCTVLEAAI---ETKTAYIDVCDD 144 (429)
Q Consensus 120 ~~~~~~~v~~aa~---~~gv~~vdis~~ 144 (429)
.. ..+++... +.|.-.||.++.
T Consensus 71 ~~---~~v~~~l~~~l~~g~ivid~st~ 95 (298)
T TIGR00872 71 IV---DAVLEELAPTLEKGDIVIDGGNS 95 (298)
T ss_pred HH---HHHHHHHHhhCCCCCEEEECCCC
Confidence 11 34444332 234445665543
No 415
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.04 E-value=0.0016 Score=66.77 Aligned_cols=91 Identities=23% Similarity=0.356 Sum_probs=63.3
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+|.|+||+|.+|+.+++.|.+. +++|++.+|++++..+++..++ +. .. .+..+.+.++|+||-|+.+.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~--G~~V~v~~r~~~~~~~~a~~~g--v~-----~~--~~~~e~~~~aDvVIlavp~~ 69 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEK--GFEVIVTGRDPKKGKEVAKELG--VE-----YA--NDNIDAAKDADIVIISVPIN 69 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHC--CCEEEEEECChHHHHHHHHHcC--Ce-----ec--cCHHHHhccCCEEEEecCHH
Confidence 47999999999999999999987 7899999999887666655442 21 11 12345677899999998654
Q ss_pred CCCchHHHHHHHH---HcCCcEEEeCCC
Q 014177 120 QQAPKCTVLEAAI---ETKTAYIDVCDD 144 (429)
Q Consensus 120 ~~~~~~~v~~aa~---~~gv~~vdis~~ 144 (429)
.. ..+++... ..+.-.+|+++.
T Consensus 70 ~~---~~vl~~l~~~l~~~~iViDvsSv 94 (437)
T PRK08655 70 VT---EDVIKEVAPHVKEGSLLMDVTSV 94 (437)
T ss_pred HH---HHHHHHHHhhCCCCCEEEEcccc
Confidence 32 34444332 345556788753
No 416
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=97.04 E-value=0.0029 Score=57.50 Aligned_cols=91 Identities=29% Similarity=0.356 Sum_probs=58.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC-chhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN-REKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~-~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
||++.|+| +|.+|+.+++.|.+. +++|++..|+ +++.+..++.+...+ + .-+..++.+.+|+||-+.
T Consensus 1 m~~~~i~G-tGniG~alA~~~a~a--g~eV~igs~r~~~~~~a~a~~l~~~i-------~-~~~~~dA~~~aDVVvLAV- 68 (211)
T COG2085 1 MMIIAIIG-TGNIGSALALRLAKA--GHEVIIGSSRGPKALAAAAAALGPLI-------T-GGSNEDAAALADVVVLAV- 68 (211)
T ss_pred CcEEEEec-cChHHHHHHHHHHhC--CCeEEEecCCChhHHHHHHHhhcccc-------c-cCChHHHHhcCCEEEEec-
Confidence 46677776 899999999999997 8999999665 455556666554331 1 122445677899999765
Q ss_pred CCCCCchHHHHHHHHH-c-CCcEEEeCC
Q 014177 118 PFQQAPKCTVLEAAIE-T-KTAYIDVCD 143 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~-~-gv~~vdis~ 143 (429)
||... ..+++...+ . |.-.||.+.
T Consensus 69 P~~a~--~~v~~~l~~~~~~KIvID~tn 94 (211)
T COG2085 69 PFEAI--PDVLAELRDALGGKIVIDATN 94 (211)
T ss_pred cHHHH--HhHHHHHHHHhCCeEEEecCC
Confidence 55432 334444332 3 344566654
No 417
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=97.04 E-value=0.0044 Score=57.99 Aligned_cols=99 Identities=16% Similarity=0.110 Sum_probs=63.5
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-------------------HHHHHH---HhCCC--cEEEEeeC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-------------------GAAMVS---TLGKN--SEFAEVNI 96 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-------------------~~~l~~---~l~~~--v~~~~~Dl 96 (429)
+|+|+|+ |.+|..+++.|+..+-+ +++++|.+.-. .+..++ ++.+. +.....++
T Consensus 1 kVlvvG~-GGlG~eilk~La~~Gvg-~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i 78 (234)
T cd01484 1 KVLLVGA-GGIGCELLKNLALMGFG-QIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKV 78 (234)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCC-eEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccC
Confidence 5899995 66999999999987433 78888864321 111111 12222 44455566
Q ss_pred CChHHH-HHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCC
Q 014177 97 YNEGSL-LMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 97 ~d~~~l-~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~ 143 (429)
.+.+.. .++++++|+||++...... ...+-+.|.+.++++|+...
T Consensus 79 ~~~~~~~~~f~~~~DvVi~a~Dn~~a--R~~ln~~c~~~~iplI~~g~ 124 (234)
T cd01484 79 GPEQDFNDTFFEQFHIIVNALDNIIA--RRYVNGMLIFLIVPLIESGT 124 (234)
T ss_pred ChhhhchHHHHhCCCEEEECCCCHHH--HHHHHHHHHHcCCCEEEEcc
Confidence 443322 4567899999998764432 24567788888888887653
No 418
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=97.03 E-value=0.004 Score=63.01 Aligned_cols=104 Identities=20% Similarity=0.272 Sum_probs=68.0
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHHH---HhCCCcE-
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMVS---TLGKNSE- 90 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~~---~l~~~v~- 90 (429)
++.++..+|+|+|+ |.+|+.+++.|+..+.+ +++++|.+.- |.+..++ ++.+.++
T Consensus 37 q~~L~~~~VlviG~-GGlGs~va~~La~~Gvg-~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i 114 (392)
T PRK07878 37 QKRLKNARVLVIGA-GGLGSPTLLYLAAAGVG-TLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNV 114 (392)
T ss_pred HHHHhcCCEEEECC-CHHHHHHHHHHHHcCCC-eEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEE
Confidence 44567899999996 66999999999997543 7888875421 2222222 2223333
Q ss_pred -EEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 91 -FAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 91 -~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
.....++. +...++++++|+||.|..-+.. ..-+-++|.+.++++|..+
T Consensus 115 ~~~~~~i~~-~~~~~~~~~~D~Vvd~~d~~~~--r~~ln~~~~~~~~p~v~~~ 164 (392)
T PRK07878 115 RLHEFRLDP-SNAVELFSQYDLILDGTDNFAT--RYLVNDAAVLAGKPYVWGS 164 (392)
T ss_pred EEEeccCCh-hHHHHHHhcCCEEEECCCCHHH--HHHHHHHHHHcCCCEEEEE
Confidence 34444443 4466778899999998764432 2446678999999988543
No 419
>PRK07411 hypothetical protein; Validated
Probab=97.02 E-value=0.004 Score=62.89 Aligned_cols=104 Identities=18% Similarity=0.179 Sum_probs=70.1
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHHHHh---CCC--
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMVSTL---GKN-- 88 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~~~l---~~~-- 88 (429)
.++.++..+|+|+|+ |.+|+.+++.|+..+-+ +++++|.+.- |.+..++.+ .+.
T Consensus 32 ~q~~L~~~~VlivG~-GGlG~~va~~La~~Gvg-~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~ 109 (390)
T PRK07411 32 GQKRLKAASVLCIGT-GGLGSPLLLYLAAAGIG-RIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQ 109 (390)
T ss_pred HHHHHhcCcEEEECC-CHHHHHHHHHHHHcCCC-EEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCe
Confidence 456678899999996 55999999999997433 7888875421 222222222 233
Q ss_pred cEEEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEe
Q 014177 89 SEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDV 141 (429)
Q Consensus 89 v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdi 141 (429)
++.+...++. +...++++++|+||.|...+.. -..+-++|.+.+++.|..
T Consensus 110 v~~~~~~~~~-~~~~~~~~~~D~Vvd~~d~~~~--r~~ln~~~~~~~~p~v~~ 159 (390)
T PRK07411 110 VDLYETRLSS-ENALDILAPYDVVVDGTDNFPT--RYLVNDACVLLNKPNVYG 159 (390)
T ss_pred EEEEecccCH-HhHHHHHhCCCEEEECCCCHHH--HHHHHHHHHHcCCCEEEE
Confidence 4444444544 3456778899999999876532 145668899999998843
No 420
>PLN02696 1-deoxy-D-xylulose-5-phosphate reductoisomerase
Probab=97.02 E-value=0.019 Score=58.27 Aligned_cols=124 Identities=17% Similarity=0.107 Sum_probs=75.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEE--EecCchhHHHHHHHhCCCcEEEEeeCC-------------------
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVV--GSRNREKGAAMVSTLGKNSEFAEVNIY------------------- 97 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v--~~R~~~~~~~l~~~l~~~v~~~~~Dl~------------------- 97 (429)
.++|.|+|+||.||+...+-+.+....++|+. +++|.+.+.....++.++.-. ..|-.
T Consensus 57 ~KkI~ILGSTGSIGtqtLdVI~~~pd~f~vvaLaag~Ni~lL~~q~~~f~p~~v~-v~d~~~~~~l~~~l~~~~~~~~vl 135 (454)
T PLN02696 57 PKPISLLGSTGSIGTQTLDIVAENPDKFKVVALAAGSNVTLLADQVRKFKPKLVA-VRNESLVDELKEALADLDDKPEII 135 (454)
T ss_pred ccEEEEecCCcHhhHHHHHHHHhCccccEEEEEECCCCHHHHHHHHHHhCCCEEE-EcCHHHHHHHHHhhcCCCCCcEEE
Confidence 48999999999999999998887422356644 457777777766666433211 12211
Q ss_pred -ChHHHHHHhc--CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEe
Q 014177 98 -NEGSLLMALR--DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAIT 167 (429)
Q Consensus 98 -d~~~l~~~~~--~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~ 167 (429)
..+.+.+++. ++|+|+++..-+. | ..-.-+|+++|.+ |-++.-......-..+...++++|..++|
T Consensus 136 ~G~egl~~la~~~evDiVV~AIvG~a--G-L~pTl~AIkaGK~-VALANKESLV~aG~lI~~~ak~~~~~IlP 204 (454)
T PLN02696 136 PGEEGIVEVARHPEAVTVVTGIVGCA--G-LKPTVAAIEAGKD-IALANKETLIAGGPFVLPLAKKHGVKILP 204 (454)
T ss_pred ECHHHHHHHHcCCCCCEEEEeCcccc--c-hHHHHHHHHCCCc-EEEecHHHHHhhHHHHHHHHHHcCCeEee
Confidence 2245666665 5799999875332 2 3334677889865 54554333322222344556677766654
No 421
>TIGR02130 dapB_plant dihydrodipicolinate reductase. This narrow family includes genes from Arabidopsis and Fibrobacter succinogenes (which probably recieved the gene from a plant via lateral gene transfer). The sequences are distantly related to the dihydrodipicolinate reductases from archaea. In Fibrobacter this gene is the only candidate DHPR in the genome.
Probab=97.01 E-value=0.013 Score=55.71 Aligned_cols=124 Identities=15% Similarity=0.147 Sum_probs=75.8
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHhCCCcEEEE-eeCCChHHHHHHhcC-cc-EEEecC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTLGKNSEFAE-VNIYNEGSLLMALRD-VD-LVVHAA 116 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l~~~v~~~~-~Dl~d~~~l~~~~~~-~D-vVi~~a 116 (429)
+|+|.|++|.+|+.+++.+.+ ++.+++.+.-+.. ..+.+.+-.+-.+..+. -|. ...+.++++. +| ++|...
T Consensus 2 ~V~V~Ga~GkMG~~v~~av~~--~~~~Lv~~~~~~~~~~~~~~~~~g~~v~v~~~~~~--~~~l~~~~~~~~d~VvIDFT 77 (275)
T TIGR02130 2 QIMVNGCPGKMGKAVAEAADA--AGLEIVPTSFGGEEEAENEAEVAGKEILLHGPSER--EARIGEVFAKYPELICIDYT 77 (275)
T ss_pred eEEEeCCCChHHHHHHHHHhc--CCCEEEeeEccccccccchhhhcccceeeeccccc--cccHHHHHhhcCCEEEEECC
Confidence 799999999999999999876 3888887522211 11111111111111110 111 2346666665 89 999988
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEEeCCChhHHH-HHHhhHHHHHHcCCcEEecCCCccchh
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQ-RAKSFKDRAIAANIPAITTGGIYPGVS 176 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~-~~~~~~~~a~~~g~~~i~~~g~~pG~s 176 (429)
-|... ...++.|.+.|++.|.=++. +.. +...+ .++++++++...-++.|..
T Consensus 78 ~P~~~---~~n~~~~~~~gv~~ViGTTG--~~~~~~~~l---~~~~~i~~l~apNfSiGv~ 130 (275)
T TIGR02130 78 HPSAV---NDNAAFYGKHGIPFVMGTTG--GDREALAKL---VADAKHPAVIAPNMAKQIV 130 (275)
T ss_pred ChHHH---HHHHHHHHHCCCCEEEcCCC--CCHHHHHHH---HHhcCCCEEEECcccHHHH
Confidence 77544 67799999999999843322 211 22233 3335688888888887765
No 422
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=97.00 E-value=0.0025 Score=64.20 Aligned_cols=75 Identities=20% Similarity=0.233 Sum_probs=57.0
Q ss_pred CCCCCeEEEEcC----------------ChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCCh
Q 014177 36 KNRNARVLVLGG----------------TGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNE 99 (429)
Q Consensus 36 ~~~~~~VlV~Ga----------------~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~ 99 (429)
++++++|+|+|| +|.+|.++++.|..+ |++|++..++.... .+. .....|+++.
T Consensus 182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~--Ga~V~~~~g~~~~~------~~~--~~~~~~v~~~ 251 (390)
T TIGR00521 182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKR--GADVTLITGPVSLL------TPP--GVKSIKVSTA 251 (390)
T ss_pred ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHC--CCEEEEeCCCCccC------CCC--CcEEEEeccH
Confidence 478899999998 367999999999998 89999887654321 112 2356799888
Q ss_pred HHH-HHHh----cCccEEEecCCCCC
Q 014177 100 GSL-LMAL----RDVDLVVHAAGPFQ 120 (429)
Q Consensus 100 ~~l-~~~~----~~~DvVi~~agp~~ 120 (429)
+++ ++++ .++|++||+|+...
T Consensus 252 ~~~~~~~~~~~~~~~D~~i~~Aavsd 277 (390)
T TIGR00521 252 EEMLEAALNELAKDFDIFISAAAVAD 277 (390)
T ss_pred HHHHHHHHHhhcccCCEEEEcccccc
Confidence 777 4444 36899999999754
No 423
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=96.99 E-value=0.0037 Score=64.88 Aligned_cols=121 Identities=15% Similarity=0.231 Sum_probs=77.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+.+++++|+|+ |.+|++++..|.+. |++|++.+|+.++++.+.+.+.. . ..+..+ +.+ +.++|+||||.
T Consensus 330 ~~~k~vlIiGa-GgiG~aia~~L~~~--G~~V~i~~R~~~~~~~la~~~~~--~--~~~~~~---~~~-l~~~DiVInat 398 (477)
T PRK09310 330 LNNQHVAIVGA-GGAAKAIATTLARA--GAELLIFNRTKAHAEALASRCQG--K--AFPLES---LPE-LHRIDIIINCL 398 (477)
T ss_pred cCCCEEEEEcC-cHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcc--c--eechhH---hcc-cCCCCEEEEcC
Confidence 45689999995 78999999999987 77999999999888887765431 1 122222 222 46899999998
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHH
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVA 187 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~ 187 (429)
..... +.+ ... .-.+|+...+.- ..+...+++.|..++.| -.++..+.+..+
T Consensus 399 P~g~~-----~~~-~l~--~~v~D~~Y~P~~----T~ll~~A~~~G~~~~~G-------~~Ml~~Qa~~~f 450 (477)
T PRK09310 399 PPSVT-----IPK-AFP--PCVVDINTLPKH----SPYTQYARSQGSSIIYG-------YEMFAEQALLQF 450 (477)
T ss_pred CCCCc-----chh-HHh--hhEEeccCCCCC----CHHHHHHHHCcCEEECc-------HHHHHHHHHHHH
Confidence 54321 111 111 145677654421 23557788888776544 244556666544
No 424
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=96.98 E-value=0.0029 Score=58.86 Aligned_cols=96 Identities=26% Similarity=0.377 Sum_probs=69.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAA 116 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~a 116 (429)
+++|+|+|||+ =++.+++.|... +..+++.. -.+...++..... ..+.+-..+.+.+.++++ ++|+||.+.
T Consensus 2 ~~~ilvlGGT~-Dar~la~~L~~~--~~~~~~ss-~t~~g~~l~~~~~---~~~~~G~l~~e~l~~~l~e~~i~llIDAT 74 (257)
T COG2099 2 MMRILLLGGTS-DARALAKKLAAA--PVDIILSS-LTGYGAKLAEQIG---PVRVGGFLGAEGLAAFLREEGIDLLIDAT 74 (257)
T ss_pred CceEEEEeccH-HHHHHHHHhhcc--CccEEEEE-cccccccchhccC---CeeecCcCCHHHHHHHHHHcCCCEEEECC
Confidence 57899999998 799999999986 32333322 1122222333222 256666778888999987 899999999
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEEe
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYIDV 141 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vdi 141 (429)
-||...-+.+.+++|.+.|++|+-+
T Consensus 75 HPyAa~iS~Na~~aake~gipy~r~ 99 (257)
T COG2099 75 HPYAARISQNAARAAKETGIPYLRL 99 (257)
T ss_pred ChHHHHHHHHHHHHHHHhCCcEEEE
Confidence 8887655579999999999999844
No 425
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.98 E-value=0.0017 Score=58.14 Aligned_cols=72 Identities=21% Similarity=0.205 Sum_probs=50.5
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
....+.+++|.|+| +|.||+.+++.|... |.+|+..+|+......... . .+ .. .+++++++++|+|
T Consensus 30 ~~~~l~g~tvgIiG-~G~IG~~vA~~l~~f--G~~V~~~d~~~~~~~~~~~-~--~~---~~-----~~l~ell~~aDiv 95 (178)
T PF02826_consen 30 PGRELRGKTVGIIG-YGRIGRAVARRLKAF--GMRVIGYDRSPKPEEGADE-F--GV---EY-----VSLDELLAQADIV 95 (178)
T ss_dssp TBS-STTSEEEEES-TSHHHHHHHHHHHHT--T-EEEEEESSCHHHHHHHH-T--TE---EE-----SSHHHHHHH-SEE
T ss_pred CccccCCCEEEEEE-EcCCcCeEeeeeecC--CceeEEecccCChhhhccc-c--cc---ee-----eehhhhcchhhhh
Confidence 34467899999999 799999999999986 8999999998875442211 1 11 11 2366788899999
Q ss_pred EecCCC
Q 014177 113 VHAAGP 118 (429)
Q Consensus 113 i~~agp 118 (429)
+++...
T Consensus 96 ~~~~pl 101 (178)
T PF02826_consen 96 SLHLPL 101 (178)
T ss_dssp EE-SSS
T ss_pred hhhhcc
Confidence 988753
No 426
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.98 E-value=0.0036 Score=61.74 Aligned_cols=96 Identities=18% Similarity=0.166 Sum_probs=67.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC--CcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK--NSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~--~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
.++++|+| +|.+|+..+..+....+--+|.+.+|++++.+++.+++.. .++... +.| +++++.++|+||+|.
T Consensus 127 ~~~v~iiG-aG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~--~~~---~~~~~~~aDiVi~aT 200 (325)
T PRK08618 127 AKTLCLIG-TGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYV--VNS---ADEAIEEADIIVTVT 200 (325)
T ss_pred CcEEEEEC-CcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEE--eCC---HHHHHhcCCEEEEcc
Confidence 47899999 5889999888876532234899999999999988876642 222222 233 456778999999987
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
+-.+ ++++.+++.|.|.+-+.++.
T Consensus 201 ~s~~-----p~i~~~l~~G~hV~~iGs~~ 224 (325)
T PRK08618 201 NAKT-----PVFSEKLKKGVHINAVGSFM 224 (325)
T ss_pred CCCC-----cchHHhcCCCcEEEecCCCC
Confidence 5332 33337788999987776543
No 427
>PRK07340 ornithine cyclodeaminase; Validated
Probab=96.98 E-value=0.0021 Score=62.82 Aligned_cols=96 Identities=21% Similarity=0.129 Sum_probs=68.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC-CcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK-NSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~-~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
..++++|+| +|.+|+..++.+....+..+|.+.+|++++++++++++.. .+... . ++.++++.++|+||+|.
T Consensus 124 ~~~~v~IiG-aG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~---~---~~~~~av~~aDiVitaT 196 (304)
T PRK07340 124 PPGDLLLIG-TGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE---P---LDGEAIPEAVDLVVTAT 196 (304)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE---E---CCHHHHhhcCCEEEEcc
Confidence 457899999 5999999999997633335899999999999998887742 12222 2 33556778999999997
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
... .++++..++.|.|..-++++.
T Consensus 197 ~s~-----~Pl~~~~~~~g~hi~~iGs~~ 220 (304)
T PRK07340 197 TSR-----TPVYPEAARAGRLVVAVGAFT 220 (304)
T ss_pred CCC-----CceeCccCCCCCEEEecCCCC
Confidence 532 255555567787777666543
No 428
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=96.97 E-value=0.0059 Score=59.29 Aligned_cols=67 Identities=21% Similarity=0.278 Sum_probs=50.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
+++|.|+| .|.+|+.+++.|.+. +++|++.+|++++.+.+.+. .+.. .++..++++++|+||-|...
T Consensus 2 ~~~IgviG-~G~mG~~~a~~l~~~--g~~v~~~d~~~~~~~~~~~~---g~~~-------~~~~~e~~~~~d~vi~~vp~ 68 (296)
T PRK11559 2 TMKVGFIG-LGIMGKPMSKNLLKA--GYSLVVYDRNPEAVAEVIAA---GAET-------ASTAKAVAEQCDVIITMLPN 68 (296)
T ss_pred CceEEEEc-cCHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHC---CCee-------cCCHHHHHhcCCEEEEeCCC
Confidence 46899999 699999999999986 78999999999887766531 1211 12244567789999998753
No 429
>TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase. 1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis.
Probab=96.97 E-value=0.011 Score=58.64 Aligned_cols=124 Identities=19% Similarity=0.158 Sum_probs=72.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEE--EecCchhHHHHHHHhCCCcEEEEeeCC-------------------
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVV--GSRNREKGAAMVSTLGKNSEFAEVNIY------------------- 97 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v--~~R~~~~~~~l~~~l~~~v~~~~~Dl~------------------- 97 (429)
||+|.|+|+||.||.+..+-+.+....++|+. +++|.+.+.+...++.++.-.+ .|-.
T Consensus 1 Mk~i~IlGsTGSIG~qtL~Vi~~~~~~f~v~~Laa~~n~~~L~~q~~~f~p~~v~i-~d~~~~~~l~~~l~~~~~~~~v~ 79 (389)
T TIGR00243 1 MKQIVILGSTGSIGKSTLDVVRHNPDHFQVVALSAGKNVALMVEQILEFRPKFVAI-DDEASLKDLKTMLQQQGSRTEVL 79 (389)
T ss_pred CceEEEEecChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHcCCCEEEE-cCHHHHHHHHHHhhcCCCCcEEE
Confidence 47999999999999999988776322466655 4577778877777765432221 2211
Q ss_pred -ChHHHHHHhc--CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEe
Q 014177 98 -NEGSLLMALR--DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAIT 167 (429)
Q Consensus 98 -d~~~l~~~~~--~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~ 167 (429)
..+.+.+++. ++|+|+++.--+ .| ..-.-++++.|.+ |-++.-......-.-+...+++++..++|
T Consensus 80 ~G~~~l~~l~~~~~~D~vv~AivG~--aG-L~pt~~Ai~~gk~-iaLANKEsLV~aG~li~~~a~~~~~~I~P 148 (389)
T TIGR00243 80 VGEEGICEMAALEDVDQVMNAIVGA--AG-LLPTLAAIRAGKT-IALANKESLVTAGHLFLDAVKKYGVQLLP 148 (389)
T ss_pred ECHHHHHHHHcCCCCCEEEEhhhcH--hh-HHHHHHHHHCCCc-EEEechhHHHhhHHHHHHHHHHcCCeEEe
Confidence 2334444444 479999876322 22 3444556788854 44554333322222234455666666554
No 430
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=96.93 E-value=0.0058 Score=59.58 Aligned_cols=99 Identities=18% Similarity=0.190 Sum_probs=66.5
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHHH---HhCCC--cEEEEeeC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMVS---TLGKN--SEFAEVNI 96 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~~---~l~~~--v~~~~~Dl 96 (429)
+|+|+|+ |.+|..+++.|+..+.+ +++++|.+.- |.+..++ ++.+. ++....++
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gvg-~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i 78 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGFG-EIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANI 78 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcCC-eEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccC
Confidence 5899996 66999999999987433 7888875422 2222222 22233 44455566
Q ss_pred CChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCC
Q 014177 97 YNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 97 ~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~ 143 (429)
.+.+...++++++|+||++...... ...+-+.|.+.++++|+...
T Consensus 79 ~~~~~~~~f~~~~DvVv~a~Dn~~a--r~~in~~c~~~~ip~I~~gt 123 (312)
T cd01489 79 KDPDFNVEFFKQFDLVFNALDNLAA--RRHVNKMCLAADVPLIESGT 123 (312)
T ss_pred CCccchHHHHhcCCEEEECCCCHHH--HHHHHHHHHHCCCCEEEEec
Confidence 6543345678899999999865432 24577889999999998653
No 431
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.93 E-value=0.0032 Score=55.84 Aligned_cols=80 Identities=20% Similarity=0.237 Sum_probs=56.9
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
.++.+++|+|+|+++.+|..+++.|.++ +.+|++.+|+. +.+.+.++++|+||+
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~--g~~V~v~~r~~------------------------~~l~~~l~~aDiVIs 93 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNR--NATVTVCHSKT------------------------KNLKEHTKQADIVIV 93 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhC--CCEEEEEECCc------------------------hhHHHHHhhCCEEEE
Confidence 4588999999997656799999999987 77899988762 235667889999999
Q ss_pred cCCCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 115 AAGPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
+.+-..... .. -++.+.-.||++...
T Consensus 94 at~~~~ii~-~~----~~~~~~viIDla~pr 119 (168)
T cd01080 94 AVGKPGLVK-GD----MVKPGAVVIDVGINR 119 (168)
T ss_pred cCCCCceec-HH----HccCCeEEEEccCCC
Confidence 986422211 11 234455567777543
No 432
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=96.90 E-value=0.0055 Score=65.06 Aligned_cols=88 Identities=19% Similarity=0.172 Sum_probs=66.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~ag 117 (429)
..+++|+| +|.+|+.+++.|.++ ++++++.|.|+++.+++.+ .....+.+|.+|++.++++ ++++|.|+-+.+
T Consensus 417 ~~hiiI~G-~G~~G~~la~~L~~~--g~~vvvId~d~~~~~~~~~---~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~ 490 (558)
T PRK10669 417 CNHALLVG-YGRVGSLLGEKLLAA--GIPLVVIETSRTRVDELRE---RGIRAVLGNAANEEIMQLAHLDCARWLLLTIP 490 (558)
T ss_pred CCCEEEEC-CChHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHH---CCCeEEEcCCCCHHHHHhcCccccCEEEEEcC
Confidence 35799999 699999999999987 7899999999999887764 3578999999999988765 458998876654
Q ss_pred CCCCCchHHHHHHHHHc
Q 014177 118 PFQQAPKCTVLEAAIET 134 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~ 134 (429)
-.. .+..+..++++.
T Consensus 491 ~~~--~~~~iv~~~~~~ 505 (558)
T PRK10669 491 NGY--EAGEIVASAREK 505 (558)
T ss_pred ChH--HHHHHHHHHHHH
Confidence 211 123455555443
No 433
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=96.90 E-value=0.0051 Score=65.77 Aligned_cols=90 Identities=16% Similarity=0.130 Sum_probs=70.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~ag 117 (429)
..+|+|+| +|.+|+.+++.|.++ ++++++.|.|+++.+.+.+ .....+.+|.+|++.++++ ++++|.||-+.+
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~--g~~vvvID~d~~~v~~~~~---~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~ 473 (601)
T PRK03659 400 KPQVIIVG-FGRFGQVIGRLLMAN--KMRITVLERDISAVNLMRK---YGYKVYYGDATQLELLRAAGAEKAEAIVITCN 473 (601)
T ss_pred cCCEEEec-CchHHHHHHHHHHhC--CCCEEEEECCHHHHHHHHh---CCCeEEEeeCCCHHHHHhcCCccCCEEEEEeC
Confidence 35799999 799999999999987 7899999999998887754 2468899999999988776 558999998865
Q ss_pred CCCCCchHHHHHHHHHcCC
Q 014177 118 PFQQAPKCTVLEAAIETKT 136 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv 136 (429)
-.. .+..+.+.+++...
T Consensus 474 d~~--~n~~i~~~~r~~~p 490 (601)
T PRK03659 474 EPE--DTMKIVELCQQHFP 490 (601)
T ss_pred CHH--HHHHHHHHHHHHCC
Confidence 321 22456666666543
No 434
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.89 E-value=0.013 Score=57.20 Aligned_cols=69 Identities=22% Similarity=0.187 Sum_probs=47.8
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
|+|.|+| .|.+|+.+++.|++. +++|++.+|++++.+.+.+ . .+.. ..+.+++.+.++++|+||-+..+
T Consensus 1 m~Ig~IG-lG~MG~~mA~~L~~~--g~~v~v~dr~~~~~~~~~~-~--g~~~----~~~~~e~~~~~~~~dvvi~~v~~ 69 (301)
T PRK09599 1 MQLGMIG-LGRMGGNMARRLLRG--GHEVVGYDRNPEAVEALAE-E--GATG----ADSLEELVAKLPAPRVVWLMVPA 69 (301)
T ss_pred CEEEEEc-ccHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHH-C--CCee----cCCHHHHHhhcCCCCEEEEEecC
Confidence 4799999 799999999999987 7899999999988877654 1 1211 12333333323346777777643
No 435
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=96.87 E-value=0.0075 Score=55.74 Aligned_cols=105 Identities=22% Similarity=0.245 Sum_probs=63.6
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHHHHh---CCCcEEE
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMVSTL---GKNSEFA 92 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~~~l---~~~v~~~ 92 (429)
+.++..+|+|+|. |.+|+++++.|++.+-| ++++.|-+.- |.+.+++.+ .+..+..
T Consensus 26 ekl~~~~V~VvGi-GGVGSw~veALaRsGig-~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~ 103 (263)
T COG1179 26 EKLKQAHVCVVGI-GGVGSWAVEALARSGIG-RITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVT 103 (263)
T ss_pred HHHhhCcEEEEec-CchhHHHHHHHHHcCCC-eEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEe
Confidence 3456789999996 55999999999998433 7777764311 122222222 2233332
Q ss_pred Ee-eCCChHHHHHHhc-CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCC
Q 014177 93 EV-NIYNEGSLLMALR-DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 93 ~~-Dl~d~~~l~~~~~-~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~ 143 (429)
.. |.-.++.+++++. ++|.||.|...... ...+++.|.+.+++.|-..+
T Consensus 104 ~~~~f~t~en~~~~~~~~~DyvIDaiD~v~~--Kv~Li~~c~~~ki~vIss~G 154 (263)
T COG1179 104 AINDFITEENLEDLLSKGFDYVIDAIDSVRA--KVALIAYCRRNKIPVISSMG 154 (263)
T ss_pred ehHhhhCHhHHHHHhcCCCCEEEEchhhhHH--HHHHHHHHHHcCCCEEeecc
Confidence 22 3344566666665 58888888653322 25677778888877764443
No 436
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.
Probab=96.87 E-value=0.0015 Score=62.84 Aligned_cols=101 Identities=15% Similarity=0.086 Sum_probs=57.9
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-------------------HHHHH---HHhCCCcE
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-------------------GAAMV---STLGKNSE 90 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-------------------~~~l~---~~l~~~v~ 90 (429)
.++.++..+|+|+|+ |.+|..+++.|+..+.+ +++++|.+.-. ++..+ +++.+.++
T Consensus 13 aq~kL~~s~VLIvG~-gGLG~EiaKnLalaGVg-~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~ 90 (286)
T cd01491 13 AMKKLQKSNVLISGL-GGLGVEIAKNLILAGVK-SVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVP 90 (286)
T ss_pred HHHHHhcCcEEEEcC-CHHHHHHHHHHHHcCCC-eEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCE
Confidence 445677899999996 55999999999997433 78888854321 12111 12223333
Q ss_pred EEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEE
Q 014177 91 FAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYID 140 (429)
Q Consensus 91 ~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vd 140 (429)
....+-. ...+.+.++|+||.|...... ...+-++|.+.++++|.
T Consensus 91 V~~~~~~---~~~~~l~~fdvVV~~~~~~~~--~~~in~~c~~~~ipfI~ 135 (286)
T cd01491 91 VTVSTGP---LTTDELLKFQVVVLTDASLED--QLKINEFCHSPGIKFIS 135 (286)
T ss_pred EEEEecc---CCHHHHhcCCEEEEecCCHHH--HHHHHHHHHHcCCEEEE
Confidence 2222211 112345677777777543221 13455666666666664
No 437
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=96.86 E-value=0.0058 Score=65.59 Aligned_cols=89 Identities=16% Similarity=0.140 Sum_probs=69.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~ag 117 (429)
..+|+|+| +|.+|+.+++.|.++ +.++++.|.|+++.+.+.+ .+...+.+|.+|++.++++ ++++|.||-+.+
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~--g~~vvvID~d~~~v~~~~~---~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~ 473 (621)
T PRK03562 400 QPRVIIAG-FGRFGQIVGRLLLSS--GVKMTVLDHDPDHIETLRK---FGMKVFYGDATRMDLLESAGAAKAEVLINAID 473 (621)
T ss_pred cCcEEEEe-cChHHHHHHHHHHhC--CCCEEEEECCHHHHHHHHh---cCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeC
Confidence 36899999 799999999999987 7899999999999888765 3478899999999988764 458999998864
Q ss_pred CCCCCchHHHHHHHHHcC
Q 014177 118 PFQQAPKCTVLEAAIETK 135 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~g 135 (429)
-.. .+..+.+.+++..
T Consensus 474 d~~--~n~~i~~~ar~~~ 489 (621)
T PRK03562 474 DPQ--TSLQLVELVKEHF 489 (621)
T ss_pred CHH--HHHHHHHHHHHhC
Confidence 221 2245556666654
No 438
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=96.86 E-value=0.0024 Score=62.07 Aligned_cols=99 Identities=27% Similarity=0.263 Sum_probs=60.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCce-EEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQ-IVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~-v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
+++|.|+|++|.+|+.+++.|.++++.++ +.+........++..+ +.+....+.-|+.|.. .++++|+|+.|+|
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~~~~-f~~~~~~v~~~~~~~~----~~~~~Divf~~ag 75 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKKYIE-FGGKSIGVPEDAADEF----VFSDVDIVFFAAG 75 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCcccc-ccCccccCcccccccc----ccccCCEEEEeCc
Confidence 47899999999999999999999755554 3333322222221111 1111111122222222 2338999999997
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
-... ..+...+.++|+-.||-++.-
T Consensus 76 ~~~s---~~~~p~~~~~G~~VIdnsSa~ 100 (334)
T COG0136 76 GSVS---KEVEPKAAEAGCVVIDNSSAF 100 (334)
T ss_pred hHHH---HHHHHHHHHcCCEEEeCCccc
Confidence 4332 578888999998888877643
No 439
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=96.83 E-value=0.018 Score=55.03 Aligned_cols=78 Identities=23% Similarity=0.302 Sum_probs=53.6
Q ss_pred EEEEcCChHHHHHHHHHHhHcC--CCceEEEEecCchhHHHHHHHhCCCcEEE-EeeCCChHHHHHHhcCccEEEecCCC
Q 014177 42 VLVLGGTGRVGGSTAVALSKLC--PDLQIVVGSRNREKGAAMVSTLGKNSEFA-EVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~--~g~~v~v~~R~~~~~~~l~~~l~~~v~~~-~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
|.|+|++|.+|..++..|+..+ ...++++.|++.++++....++..-.... ...+.-.+++.+.++++|+||.+++.
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~ 80 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV 80 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence 5799988999999999999863 23699999999888777665553111110 11221122345678899999999875
Q ss_pred C
Q 014177 119 F 119 (429)
Q Consensus 119 ~ 119 (429)
.
T Consensus 81 ~ 81 (263)
T cd00650 81 G 81 (263)
T ss_pred C
Confidence 3
No 440
>PRK08291 ectoine utilization protein EutC; Validated
Probab=96.81 E-value=0.0048 Score=60.95 Aligned_cols=95 Identities=19% Similarity=0.207 Sum_probs=65.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCC--cEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKN--SEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~--v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
.++++|+| +|..|+..+..|....+..+|.+.+|+.++++++.+++..+ +.+.. . +++++++.++|+||++.
T Consensus 132 ~~~v~IiG-aG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~v~~--~---~d~~~al~~aDiVi~aT 205 (330)
T PRK08291 132 ASRAAVIG-AGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIPVTV--A---RDVHEAVAGADIIVTTT 205 (330)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCceEEE--e---CCHHHHHccCCEEEEee
Confidence 47899999 57799999988876333358999999999999998876422 22221 1 23566778999999987
Q ss_pred CCCCCCchHHHHHH-HHHcCCcEEEeCCC
Q 014177 117 GPFQQAPKCTVLEA-AIETKTAYIDVCDD 144 (429)
Q Consensus 117 gp~~~~~~~~v~~a-a~~~gv~~vdis~~ 144 (429)
... .++++. .++.|.|...+..+
T Consensus 206 ~s~-----~p~i~~~~l~~g~~v~~vg~d 229 (330)
T PRK08291 206 PSE-----EPILKAEWLHPGLHVTAMGSD 229 (330)
T ss_pred CCC-----CcEecHHHcCCCceEEeeCCC
Confidence 432 245544 35677776655543
No 441
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.81 E-value=0.0058 Score=58.38 Aligned_cols=71 Identities=23% Similarity=0.244 Sum_probs=51.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCC-CceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCP-DLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~-g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
|++|.|+| +|.+|+.+++.|.+.+. ..+|.+.+|+.++.+.+.+.++ +.. ..+ ..+.++++|+||-|..
T Consensus 2 mm~I~iIG-~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g--~~~----~~~---~~~~~~~advVil~v~ 71 (267)
T PRK11880 2 MKKIGFIG-GGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYG--VRA----ATD---NQEAAQEADVVVLAVK 71 (267)
T ss_pred CCEEEEEe-chHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcC--Cee----cCC---hHHHHhcCCEEEEEcC
Confidence 57899999 59999999999988621 1689999999988877765432 211 112 2344678999999886
Q ss_pred CC
Q 014177 118 PF 119 (429)
Q Consensus 118 p~ 119 (429)
+.
T Consensus 72 ~~ 73 (267)
T PRK11880 72 PQ 73 (267)
T ss_pred HH
Confidence 54
No 442
>PLN02775 Probable dihydrodipicolinate reductase
Probab=96.81 E-value=0.04 Score=52.78 Aligned_cols=126 Identities=16% Similarity=0.109 Sum_probs=76.4
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHhCCCcEEEEeeCCChHHHH-HHh-cCcc-EEEec
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTLGKNSEFAEVNIYNEGSLL-MAL-RDVD-LVVHA 115 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~-~~~-~~~D-vVi~~ 115 (429)
.+|+|.|++|.+|+.+++.+.+ ++.+++.+ ++... .+.+.-++.+ .........|.+.+- +.. +.+| ++|..
T Consensus 12 i~V~V~Ga~G~MG~~~~~av~~--~~~~Lv~~~~~~~~-~~~~~~~~~g-~~v~~~~~~dl~~~l~~~~~~~~~~VvIDF 87 (286)
T PLN02775 12 IPIMVNGCTGKMGHAVAEAAVS--AGLQLVPVSFTGPA-GVGVTVEVCG-VEVRLVGPSEREAVLSSVKAEYPNLIVVDY 87 (286)
T ss_pred CeEEEECCCChHHHHHHHHHhc--CCCEEEEEeccccc-cccccceecc-ceeeeecCccHHHHHHHhhccCCCEEEEEC
Confidence 5999999999999999999988 38887764 33322 1111101111 111222223433322 221 2589 89998
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchh
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVS 176 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s 176 (429)
.-|... ...++.|+++|++.|.-++. +... .+.+...+++++++...-++.|..
T Consensus 88 T~P~a~---~~~~~~~~~~g~~~VvGTTG--~~~e--~l~~~~~~~~i~vv~apNfSiGv~ 141 (286)
T PLN02775 88 TLPDAV---NDNAELYCKNGLPFVMGTTG--GDRD--RLLKDVEESGVYAVIAPQMGKQVV 141 (286)
T ss_pred CChHHH---HHHHHHHHHCCCCEEEECCC--CCHH--HHHHHHhcCCccEEEECcccHHHH
Confidence 876543 67899999999999854322 2211 223334456788888877777753
No 443
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=96.80 E-value=0.0017 Score=63.51 Aligned_cols=75 Identities=25% Similarity=0.298 Sum_probs=52.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCc----EEEEeeCCChHHHHHHhcCccEEEec
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNS----EFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v----~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++|.|+|+ |.+|+.++..|+..+...+|++.|++.++++.++.++.... .....-..+.+ .++++|+||++
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~----~l~~aDIVIit 75 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYS----DCKDADIVVIT 75 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHH----HhCCCCEEEEc
Confidence 47999995 88999999999987322589999999998887776552100 00111122332 35799999999
Q ss_pred CCCC
Q 014177 116 AGPF 119 (429)
Q Consensus 116 agp~ 119 (429)
+|..
T Consensus 76 ag~~ 79 (306)
T cd05291 76 AGAP 79 (306)
T ss_pred cCCC
Confidence 9864
No 444
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=96.80 E-value=0.0062 Score=60.07 Aligned_cols=95 Identities=16% Similarity=0.158 Sum_probs=66.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCC--cEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKN--SEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~--v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
.++++|+| +|..|+..++.|....+-.+|.+.+|+.++++++++++... +++.. . +++++.+.++|+|++|.
T Consensus 129 ~~~v~iiG-aG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v~~--~---~~~~~av~~aDiVvtaT 202 (326)
T TIGR02992 129 SSVVAIFG-AGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDVTA--A---TDPRAAMSGADIIVTTT 202 (326)
T ss_pred CcEEEEEC-CCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceEEE--e---CCHHHHhccCCEEEEec
Confidence 46899999 58899999999975322247999999999999988876421 22221 2 33567778999999997
Q ss_pred CCCCCCchHHHHH-HHHHcCCcEEEeCCC
Q 014177 117 GPFQQAPKCTVLE-AAIETKTAYIDVCDD 144 (429)
Q Consensus 117 gp~~~~~~~~v~~-aa~~~gv~~vdis~~ 144 (429)
+.. .+++. ..++.|.+...+..+
T Consensus 203 ~s~-----~p~i~~~~l~~g~~i~~vg~~ 226 (326)
T TIGR02992 203 PSE-----TPILHAEWLEPGQHVTAMGSD 226 (326)
T ss_pred CCC-----CcEecHHHcCCCcEEEeeCCC
Confidence 532 23443 346777777666544
No 445
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=96.77 E-value=0.019 Score=59.38 Aligned_cols=117 Identities=16% Similarity=0.168 Sum_probs=67.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC-CcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK-NSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~-~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
|.+|.|+| .|.+|+.+++.|+++ |++|.+.+|++++.+.+.+.... ...... ..+.+++.+.++++|+||-++.
T Consensus 1 ~~~IgvIG-LG~MG~~lA~nL~~~--G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~--~~s~~e~v~~l~~~d~Iil~v~ 75 (470)
T PTZ00142 1 MSDIGLIG-LAVMGQNLALNIASR--GFKISVYNRTYEKTEEFVKKAKEGNTRVKG--YHTLEELVNSLKKPRKVILLIK 75 (470)
T ss_pred CCEEEEEe-EhHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHhhhhcCCccee--cCCHHHHHhcCCCCCEEEEEeC
Confidence 35799999 699999999999997 89999999999998887653211 111111 2233333333346887777764
Q ss_pred CCCCCchHHHHHHH---HHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCc
Q 014177 118 PFQQAPKCTVLEAA---IETKTAYIDVCDDTIYSQRAKSFKDRAIAANIP 164 (429)
Q Consensus 118 p~~~~~~~~v~~aa---~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~ 164 (429)
+... ...+++.. ++.|.-.||.+... + .......+..+++|+.
T Consensus 76 ~~~~--v~~vi~~l~~~L~~g~iIID~gn~~-~-~dt~~r~~~l~~~Gi~ 121 (470)
T PTZ00142 76 AGEA--VDETIDNLLPLLEKGDIIIDGGNEW-Y-LNTERRIKRCEEKGIL 121 (470)
T ss_pred ChHH--HHHHHHHHHhhCCCCCEEEECCCCC-H-HHHHHHHHHHHHcCCe
Confidence 4321 12333332 23444556665432 1 1222223444555544
No 446
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.76 E-value=0.041 Score=57.15 Aligned_cols=100 Identities=22% Similarity=0.223 Sum_probs=64.0
Q ss_pred ccccCCccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH
Q 014177 26 TVLDGAHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA 105 (429)
Q Consensus 26 ~~~~~~~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~ 105 (429)
++.|+. ..+.+.+++|+|+| .|..|.++++.|.+. |++|++.|++.....++.+.+ .+.+...+ .+.+ .
T Consensus 3 ~~~~~~-~~~~~~~~~v~v~G-~G~sG~a~a~~L~~~--G~~V~~~D~~~~~~~~~l~~~--gi~~~~~~-~~~~----~ 71 (473)
T PRK00141 3 ILVPLS-ALPQELSGRVLVAG-AGVSGRGIAAMLSEL--GCDVVVADDNETARHKLIEVT--GVADISTA-EASD----Q 71 (473)
T ss_pred ccChhh-hcccccCCeEEEEc-cCHHHHHHHHHHHHC--CCEEEEECCChHHHHHHHHhc--CcEEEeCC-Cchh----H
Confidence 345554 34456778899999 577999999999987 789999998765544333322 24443321 1112 2
Q ss_pred hcCccEEEecCCCCCCCchHHHHHHHHHcCCcEE
Q 014177 106 LRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYI 139 (429)
Q Consensus 106 ~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~v 139 (429)
+.++|+||...|.... .+.+++|.+.|++.+
T Consensus 72 ~~~~d~vV~Spgi~~~---~p~~~~a~~~gi~v~ 102 (473)
T PRK00141 72 LDSFSLVVTSPGWRPD---SPLLVDAQSQGLEVI 102 (473)
T ss_pred hcCCCEEEeCCCCCCC---CHHHHHHHHCCCcee
Confidence 4578999988765433 356666777666443
No 447
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=96.76 E-value=0.011 Score=58.69 Aligned_cols=77 Identities=29% Similarity=0.380 Sum_probs=55.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc----CccEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR----DVDLV 112 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~----~~DvV 112 (429)
-.+++|||.||+|.+|+++++..... +...+++.++.++.+ +.+.++. -..+|..+++..++..+ ++|+|
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~--~~~~v~t~~s~e~~~-l~k~lGA---d~vvdy~~~~~~e~~kk~~~~~~DvV 229 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHA--GAIKVVTACSKEKLE-LVKKLGA---DEVVDYKDENVVELIKKYTGKGVDVV 229 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhc--CCcEEEEEcccchHH-HHHHcCC---cEeecCCCHHHHHHHHhhcCCCccEE
Confidence 45679999999999999999988876 555566666666644 4445542 24578888665555544 59999
Q ss_pred EecCCCC
Q 014177 113 VHAAGPF 119 (429)
Q Consensus 113 i~~agp~ 119 (429)
+.|+|..
T Consensus 230 lD~vg~~ 236 (347)
T KOG1198|consen 230 LDCVGGS 236 (347)
T ss_pred EECCCCC
Confidence 9999864
No 448
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.74 E-value=0.0074 Score=52.94 Aligned_cols=134 Identities=21% Similarity=0.245 Sum_probs=75.8
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++.+++|+|+|| |-+|...++.|++. +++|++++ ++..+++.+ ++ .+.+..-.+.. .-++++|+||-+
T Consensus 10 ~l~~~~vlVvGG-G~va~rka~~Ll~~--ga~V~VIs--p~~~~~l~~-l~-~i~~~~~~~~~-----~dl~~a~lViaa 77 (157)
T PRK06719 10 NLHNKVVVIIGG-GKIAYRKASGLKDT--GAFVTVVS--PEICKEMKE-LP-YITWKQKTFSN-----DDIKDAHLIYAA 77 (157)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhC--CCEEEEEc--CccCHHHHh-cc-CcEEEecccCh-----hcCCCceEEEEC
Confidence 467899999995 88999999999997 78998884 444444443 32 34443333222 225689999987
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCc-EEecCCCccchhHHHHHHHHHHH
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIP-AITTGGIYPGVSNVMAAELVRVA 187 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~-~i~~~g~~pG~s~~~a~~~~~~~ 187 (429)
.+.... +..+.+.|.+ +. .+...++.....- .+....+..+.. .+...|.+|.+++.+-+.+...+
T Consensus 78 T~d~e~--N~~i~~~a~~-~~-~vn~~d~~~~~~f--~~pa~v~~~~l~iaisT~G~sP~la~~lr~~ie~~l 144 (157)
T PRK06719 78 TNQHAV--NMMVKQAAHD-FQ-WVNVVSDGTESSF--HTPGVIRNDEYVVTISTSGKDPSFTKRLKQELTSIL 144 (157)
T ss_pred CCCHHH--HHHHHHHHHH-CC-cEEECCCCCcCcE--EeeeEEEECCeEEEEECCCcChHHHHHHHHHHHHHh
Confidence 643221 2445555655 32 3444444331110 000111112232 23345677888887777666544
No 449
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=96.71 E-value=0.017 Score=55.93 Aligned_cols=65 Identities=15% Similarity=0.256 Sum_probs=49.5
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
+|.|+| .|.+|+.+++.|++. |++|++.+|++++.+.+.+. ... ...+..++++++|+||-|...
T Consensus 1 ~IgvIG-~G~mG~~iA~~l~~~--G~~V~~~dr~~~~~~~~~~~---g~~-------~~~~~~~~~~~aDivi~~vp~ 65 (291)
T TIGR01505 1 KVGFIG-LGIMGSPMSINLAKA--GYQLHVTTIGPEVADELLAA---GAV-------TAETARQVTEQADVIFTMVPD 65 (291)
T ss_pred CEEEEE-ecHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHC---CCc-------ccCCHHHHHhcCCEEEEecCC
Confidence 488998 699999999999987 79999999999888776542 111 112345667889999998753
No 450
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.67 E-value=0.0041 Score=52.43 Aligned_cols=45 Identities=24% Similarity=0.372 Sum_probs=32.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHh
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTL 85 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l 85 (429)
..++|.|+|+ |.+|.++++.|.+. +++|..+ +|+.+..+++...+
T Consensus 9 ~~l~I~iIGa-GrVG~~La~aL~~a--g~~v~~v~srs~~sa~~a~~~~ 54 (127)
T PF10727_consen 9 ARLKIGIIGA-GRVGTALARALARA--GHEVVGVYSRSPASAERAAAFI 54 (127)
T ss_dssp ---EEEEECT-SCCCCHHHHHHHHT--TSEEEEESSCHH-HHHHHHC--
T ss_pred CccEEEEECC-CHHHHHHHHHHHHC--CCeEEEEEeCCccccccccccc
Confidence 3479999995 99999999999987 7887665 67776666666544
No 451
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=96.67 E-value=0.0039 Score=58.18 Aligned_cols=75 Identities=12% Similarity=0.142 Sum_probs=52.2
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHh-------
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMAL------- 106 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~------- 106 (429)
.|.+..-|.+=-.++|.+|+++++.|+++ |++|++.++... +. . .....+|+.+.+++.+++
T Consensus 10 ~e~iD~VR~itN~SSGgIG~AIA~~la~~--Ga~Vvlv~~~~~-l~-------~-~~~~~~Dv~d~~s~~~l~~~v~~~~ 78 (227)
T TIGR02114 10 SEPIDSVRSITNHSTGHLGKIITETFLSA--GHEVTLVTTKRA-LK-------P-EPHPNLSIREIETTKDLLITLKELV 78 (227)
T ss_pred cCCCCCceeecCCcccHHHHHHHHHHHHC--CCEEEEEcChhh-cc-------c-ccCCcceeecHHHHHHHHHHHHHHc
Confidence 44455556666667899999999999998 899999876311 10 0 011347888877666543
Q ss_pred cCccEEEecCCCC
Q 014177 107 RDVDLVVHAAGPF 119 (429)
Q Consensus 107 ~~~DvVi~~agp~ 119 (429)
.++|++||+||..
T Consensus 79 g~iDiLVnnAgv~ 91 (227)
T TIGR02114 79 QEHDILIHSMAVS 91 (227)
T ss_pred CCCCEEEECCEec
Confidence 3689999999864
No 452
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=96.60 E-value=0.014 Score=54.43 Aligned_cols=121 Identities=20% Similarity=0.171 Sum_probs=68.8
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEec----------CchhHHHHHHHhCCCcEEEEeeCCChHHHH
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSR----------NREKGAAMVSTLGKNSEFAEVNIYNEGSLL 103 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R----------~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~ 103 (429)
.++++++|+|.| .|.||+.+++.|.+. +.+|+ +.|. +.+.+.+..+..+.-..+-.....+.+.+.
T Consensus 27 ~~l~~~~v~I~G-~G~VG~~~a~~L~~~--g~~vv~v~D~~g~~~~~~Gld~~~l~~~~~~~g~l~~~~~~~~~~~~~i~ 103 (227)
T cd01076 27 IGLAGARVAIQG-FGNVGSHAARFLHEA--GAKVVAVSDSDGTIYNPDGLDVPALLAYKKEHGSVLGFPGAERITNEELL 103 (227)
T ss_pred CCccCCEEEEEC-CCHHHHHHHHHHHHC--CCEEEEEECCCCeEECCCCCCHHHHHHHHHhcCCcccCCCceecCCccce
Confidence 457889999999 799999999999986 88888 6666 555555554433211111101111222222
Q ss_pred HHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEec
Q 014177 104 MALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITT 168 (429)
Q Consensus 104 ~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~ 168 (429)
. .++|++|-|+.....++ +.+.+..+++|-=+.+..... .-.+..+++|+.++|.
T Consensus 104 ~--~~~Dvlip~a~~~~i~~-----~~~~~l~a~~I~egAN~~~t~---~a~~~L~~rGi~~~PD 158 (227)
T cd01076 104 E--LDCDILIPAALENQITA-----DNADRIKAKIIVEAANGPTTP---EADEILHERGVLVVPD 158 (227)
T ss_pred e--ecccEEEecCccCccCH-----HHHhhceeeEEEeCCCCCCCH---HHHHHHHHCCCEEECh
Confidence 2 28999999985433221 223344566664333333221 1223445677777665
No 453
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=96.56 E-value=0.0028 Score=55.63 Aligned_cols=74 Identities=20% Similarity=0.291 Sum_probs=50.9
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEE-EeeCCChHHHHHHhcCccEEEe
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFA-EVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~-~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
+|.|+|| |..|.+++..|.++ +++|.+.+|+.+..+.+.+.-. +....- ...++ .+++++++++|+||-
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~--g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t--~dl~~a~~~ad~Iii 75 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADN--GHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKAT--TDLEEALEDADIIII 75 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHC--TEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEE--SSHHHHHTT-SEEEE
T ss_pred CEEEECc-CHHHHHHHHHHHHc--CCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccc--cCHHHHhCcccEEEe
Confidence 6899995 89999999999997 7999999999988887776432 111110 01111 236678899999998
Q ss_pred cCCCC
Q 014177 115 AAGPF 119 (429)
Q Consensus 115 ~agp~ 119 (429)
+...+
T Consensus 76 avPs~ 80 (157)
T PF01210_consen 76 AVPSQ 80 (157)
T ss_dssp -S-GG
T ss_pred cccHH
Confidence 76543
No 454
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=96.56 E-value=0.024 Score=52.50 Aligned_cols=119 Identities=19% Similarity=0.092 Sum_probs=68.6
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCc----------hhHHHHHHHhCCCcEEE-EeeCCChHHH
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNR----------EKGAAMVSTLGKNSEFA-EVNIYNEGSL 102 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~----------~~~~~l~~~l~~~v~~~-~~Dl~d~~~l 102 (429)
.++++++|+|.| .|.+|+++++.|.+. |. .|.+.|.+. +.++...+. . .+... ..|..+.+.+
T Consensus 19 ~~l~g~~vaIqG-fGnVG~~~a~~L~~~--G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~-~-~~~~~~~~~~~~~~~l 93 (217)
T cd05211 19 DSLEGLTVAVQG-LGNVGWGLAKKLAEE--GGKVLAVSDPDGYIYDPGITTEELINYAVAL-G-GSARVKVQDYFPGEAI 93 (217)
T ss_pred CCcCCCEEEEEC-CCHHHHHHHHHHHHc--CCEEEEEEcCCCcEECCCCCHHHHHHHHHhh-C-CccccCcccccCcccc
Confidence 357889999999 799999999999997 56 455667665 444333322 1 12111 2233344444
Q ss_pred HHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEec
Q 014177 103 LMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITT 168 (429)
Q Consensus 103 ~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~ 168 (429)
... ++|++|-||...... -+.+.+.++++|--..+..... .-.+..++.|+.++|+
T Consensus 94 ~~~--~~DVlipaA~~~~i~-----~~~a~~l~a~~V~e~AN~p~t~---~a~~~L~~~Gi~v~Pd 149 (217)
T cd05211 94 LGL--DVDIFAPCALGNVID-----LENAKKLKAKVVAEGANNPTTD---EALRILHERGIVVAPD 149 (217)
T ss_pred eec--cccEEeeccccCccC-----hhhHhhcCccEEEeCCCCCCCH---HHHHHHHHCCcEEECh
Confidence 322 899999998643321 2344556677775443322221 1123345567665553
No 455
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.55 E-value=0.0071 Score=59.12 Aligned_cols=94 Identities=26% Similarity=0.232 Sum_probs=59.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
+.++|.|+| +|.+|..++..|.+.+...+|++.+|++++.+...+ .+ +... .. .+..+.++++|+||.|+.
T Consensus 5 ~~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~-~g--~~~~---~~--~~~~~~~~~aDvViiavp 75 (307)
T PRK07502 5 LFDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARARE-LG--LGDR---VT--TSAAEAVKGADLVILCVP 75 (307)
T ss_pred CCcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHh-CC--CCce---ec--CCHHHHhcCCCEEEECCC
Confidence 347899999 699999999999986322489999999887665543 21 1100 11 123455678999999986
Q ss_pred CCCCCchHHHHHHH---HHcCCcEEEeCC
Q 014177 118 PFQQAPKCTVLEAA---IETKTAYIDVCD 143 (429)
Q Consensus 118 p~~~~~~~~v~~aa---~~~gv~~vdis~ 143 (429)
+... ..+++.. ...+...+|+++
T Consensus 76 ~~~~---~~v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 76 VGAS---GAVAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred HHHH---HHHHHHHHhhCCCCCEEEeCcc
Confidence 5332 2333332 233444566654
No 456
>PTZ00117 malate dehydrogenase; Provisional
Probab=96.55 E-value=0.045 Score=53.79 Aligned_cols=77 Identities=18% Similarity=0.205 Sum_probs=50.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--C---CcE-EEEeeCCChHHHHHHhcCcc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--K---NSE-FAEVNIYNEGSLLMALRDVD 110 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~---~v~-~~~~Dl~d~~~l~~~~~~~D 110 (429)
.+.++|.|+|+ |.+|+.++..|+..+ -.++++.|++.++++..+-++. . ... .+.. ..| .+ .++++|
T Consensus 3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~-~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~-~~d---~~-~l~~AD 75 (319)
T PTZ00117 3 VKRKKISMIGA-GQIGSTVALLILQKN-LGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG-TNN---YE-DIKDSD 75 (319)
T ss_pred CCCcEEEEECC-CHHHHHHHHHHHHCC-CCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe-CCC---HH-HhCCCC
Confidence 35679999996 999999999988762 1689999998876543222221 0 111 1111 123 33 568999
Q ss_pred EEEecCCCCC
Q 014177 111 LVVHAAGPFQ 120 (429)
Q Consensus 111 vVi~~agp~~ 120 (429)
+||.++|...
T Consensus 76 iVVitag~~~ 85 (319)
T PTZ00117 76 VVVITAGVQR 85 (319)
T ss_pred EEEECCCCCC
Confidence 9999997543
No 457
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=96.54 E-value=0.024 Score=55.08 Aligned_cols=66 Identities=23% Similarity=0.243 Sum_probs=49.9
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
++|.|+| .|.+|..+++.|++. +++|++.+|++++.+.+.+. ... ...+..++++++|+||-|..+
T Consensus 2 ~~Ig~IG-lG~mG~~mA~~l~~~--G~~V~v~d~~~~~~~~~~~~---g~~-------~~~s~~~~~~~aDvVi~~vp~ 67 (296)
T PRK15461 2 AAIAFIG-LGQMGSPMASNLLKQ--GHQLQVFDVNPQAVDALVDK---GAT-------PAASPAQAAAGAEFVITMLPN 67 (296)
T ss_pred CeEEEEe-eCHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHc---CCc-------ccCCHHHHHhcCCEEEEecCC
Confidence 5899999 699999999999987 78999999999988776542 111 112234566788888888754
No 458
>COG0743 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lipid metabolism]
Probab=96.54 E-value=0.026 Score=55.26 Aligned_cols=123 Identities=17% Similarity=0.179 Sum_probs=71.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEE--EecCchhHHHHHHHhCCCcEEEEeeCCChHHHH-------------
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVV--GSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLL------------- 103 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v--~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~------------- 103 (429)
++++.|+|+||.||.+..+-+.+....++|+. +++|.+.+.+..+++.++. .+..|-.+...++
T Consensus 1 ~k~i~iLGSTGSIG~qtLdVi~~~p~~f~vval~ag~n~~~l~~q~~~f~P~~-v~~~d~~~~~~l~~~~~~~~v~~G~~ 79 (385)
T COG0743 1 MKKLTILGSTGSIGTQTLDVIRRNPDKFEVVALAAGKNVELLAEQIREFKPKY-VVIADESAAKELEDLLPGTEVLVGEE 79 (385)
T ss_pred CceEEEEecCCchhHHHHHHHHhCCCcEEEEEEecCCcHHHHHHHHHHhCCce-EEecChHHHHHHHhhccCceEEecHH
Confidence 57999999999999999998887532345554 4678887777777665433 2333433333333
Q ss_pred ---HHhc--CccEEEecC-CCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEe
Q 014177 104 ---MALR--DVDLVVHAA-GPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAIT 167 (429)
Q Consensus 104 ---~~~~--~~DvVi~~a-gp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~ 167 (429)
++.. ++|+|+|+. |..+ +.---+++++|.... ++........-.-+.+.++++|..++|
T Consensus 80 ~l~e~a~~~~~d~Vm~AivG~aG----L~pTlaAi~aGK~ia-LANKEsLV~aG~l~~~~~k~~g~~llP 144 (385)
T COG0743 80 GLCELAAEDDADVVMNAIVGAAG----LLPTLAAIKAGKTIA-LANKESLVTAGELVMDAAKESGAQLLP 144 (385)
T ss_pred HHHHHHhcCCCCEEeehhhhhcc----cHHHHHHHHcCCcee-ecchhhhhcccHHHHHHHHHcCCEEec
Confidence 3322 578999875 3332 233345567775544 332222221112334566777776654
No 459
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=96.52 E-value=0.024 Score=47.76 Aligned_cols=46 Identities=26% Similarity=0.357 Sum_probs=35.4
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCceEEE--EecCchhHHHHHHHhCC
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVV--GSRNREKGAAMVSTLGK 87 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v--~~R~~~~~~~l~~~l~~ 87 (429)
|.|+|+||-||++..+-+.+....++|+. +++|.+++.+...++.+
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p 48 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKP 48 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCC
Confidence 68999999999999999988533467765 45788888877777653
No 460
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.52 E-value=0.0066 Score=58.03 Aligned_cols=101 Identities=21% Similarity=0.229 Sum_probs=72.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
...+|.|+|| |++|.+.++...-. +.+|++.++|.++++.+...+..++..+ .++...+++.+++.|+||++.-
T Consensus 167 ~~~kv~iiGG-GvvgtnaAkiA~gl--gA~Vtild~n~~rl~~ldd~f~~rv~~~---~st~~~iee~v~~aDlvIgaVL 240 (371)
T COG0686 167 LPAKVVVLGG-GVVGTNAAKIAIGL--GADVTILDLNIDRLRQLDDLFGGRVHTL---YSTPSNIEEAVKKADLVIGAVL 240 (371)
T ss_pred CCccEEEECC-ccccchHHHHHhcc--CCeeEEEecCHHHHhhhhHhhCceeEEE---EcCHHHHHHHhhhccEEEEEEE
Confidence 3467999994 99999999998876 8999999999999999887776665544 3556778999999999999873
Q ss_pred CCCCCch---HHHHHHHHHcCCcEEEeCCC
Q 014177 118 PFQQAPK---CTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 118 p~~~~~~---~~v~~aa~~~gv~~vdis~~ 144 (429)
....... .+-+-.-.+.|.-.||++-+
T Consensus 241 IpgakaPkLvt~e~vk~MkpGsVivDVAiD 270 (371)
T COG0686 241 IPGAKAPKLVTREMVKQMKPGSVIVDVAID 270 (371)
T ss_pred ecCCCCceehhHHHHHhcCCCcEEEEEEEc
Confidence 2221111 11122234556667777644
No 461
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.51 E-value=0.027 Score=54.78 Aligned_cols=93 Identities=15% Similarity=0.114 Sum_probs=57.2
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+|.++| .|.+|+.+++.|.+. +++|++.+|++++.+.+.+ . ... . ..+.+++.+..+++|+||.|..+.
T Consensus 1 m~Ig~IG-lG~mG~~mA~~L~~~--g~~v~v~dr~~~~~~~~~~-~--g~~--~--~~s~~~~~~~~~~advVi~~vp~~ 70 (299)
T PRK12490 1 MKLGLIG-LGKMGGNMAERLRED--GHEVVGYDVNQEAVDVAGK-L--GIT--A--RHSLEELVSKLEAPRTIWVMVPAG 70 (299)
T ss_pred CEEEEEc-ccHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHH-C--CCe--e--cCCHHHHHHhCCCCCEEEEEecCc
Confidence 3799998 799999999999986 7899999999988877653 1 111 1 123333222223368888887543
Q ss_pred CCCchHHHHHHHH---HcCCcEEEeCCC
Q 014177 120 QQAPKCTVLEAAI---ETKTAYIDVCDD 144 (429)
Q Consensus 120 ~~~~~~~v~~aa~---~~gv~~vdis~~ 144 (429)
.. ...+++... +.|.-+||.++.
T Consensus 71 ~~--~~~v~~~i~~~l~~g~ivid~st~ 96 (299)
T PRK12490 71 EV--TESVIKDLYPLLSPGDIVVDGGNS 96 (299)
T ss_pred hH--HHHHHHHHhccCCCCCEEEECCCC
Confidence 11 123333322 234445666543
No 462
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.50 E-value=0.012 Score=56.79 Aligned_cols=94 Identities=18% Similarity=0.165 Sum_probs=60.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcC--CCceEEEEecCch-hHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLC--PDLQIVVGSRNRE-KGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~--~g~~v~v~~R~~~-~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
|..|+|.++| +|.+|+.+++.|++.+ ...+|++.+|+.+ +++.+...++ +... .+ ..++++++|+||
T Consensus 1 ~~~mkI~~IG-~G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g--~~~~----~~---~~e~~~~aDvVi 70 (279)
T PRK07679 1 MSIQNISFLG-AGSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYG--VKGT----HN---KKELLTDANILF 70 (279)
T ss_pred CCCCEEEEEC-ccHHHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcC--ceEe----CC---HHHHHhcCCEEE
Confidence 3457899999 6999999999999862 1268899999764 5666655432 2211 12 334567899999
Q ss_pred ecCCCCCCCchHHHHHHHH---HcCCcEEEeCC
Q 014177 114 HAAGPFQQAPKCTVLEAAI---ETKTAYIDVCD 143 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~---~~gv~~vdis~ 143 (429)
-|..|... ..+++... ..+.-.|++..
T Consensus 71 lav~p~~~---~~vl~~l~~~~~~~~liIs~~a 100 (279)
T PRK07679 71 LAMKPKDV---AEALIPFKEYIHNNQLIISLLA 100 (279)
T ss_pred EEeCHHHH---HHHHHHHHhhcCCCCEEEEECC
Confidence 99876543 33333322 22344566643
No 463
>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein. Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein.
Probab=96.49 E-value=0.016 Score=60.55 Aligned_cols=104 Identities=15% Similarity=0.149 Sum_probs=72.5
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE--ecCch------hHHHHHHHhCCCcEEEEeeCCChHHHHH
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG--SRNRE------KGAAMVSTLGKNSEFAEVNIYNEGSLLM 104 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~--~R~~~------~~~~l~~~l~~~v~~~~~Dl~d~~~l~~ 104 (429)
|+.. +..+|+|+| .|.+|++++..|+..+.+ ++.++ |+-.. .+.+.+++.++.+.+...|.+..+++.+
T Consensus 124 F~~q-R~akVlVlG-~Gg~~s~lv~sL~~sG~~-~I~~vd~D~v~SNlnRIgEl~e~A~~~n~~v~v~~i~~~~~~dl~e 200 (637)
T TIGR03693 124 FELS-RNAKILAAG-SGDFLTKLVRSLIDSGFP-RFHAIVTDAEEHALDRIHELAEIAEETDDALLVQEIDFAEDQHLHE 200 (637)
T ss_pred hhhh-hcccEEEEe-cCchHHHHHHHHHhcCCC-cEEEEeccccchhhhHHHHHHHHHHHhCCCCceEeccCCcchhHHH
Confidence 3333 678999999 577999999999997422 45444 44333 2233444445567777778777888999
Q ss_pred HhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEE
Q 014177 105 ALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYI 139 (429)
Q Consensus 105 ~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~v 139 (429)
.+++.|+||+.+.-+.......+-++|.+.|.+.+
T Consensus 201 v~~~~DiVi~vsDdy~~~~Lr~lN~acvkegk~~I 235 (637)
T TIGR03693 201 AFEPADWVLYVSDNGDIDDLHALHAFCKEEGKGFI 235 (637)
T ss_pred hhcCCcEEEEECCCCChHHHHHHHHHHHHcCCCeE
Confidence 99999999999864432233567788999995553
No 464
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=96.46 E-value=0.038 Score=57.38 Aligned_cols=75 Identities=15% Similarity=0.166 Sum_probs=51.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC-CcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK-NSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~-~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
+++|.++| .|.+|+.+++.|++. |++|.+.+|++++.+.+.+.... ....+ .-..+.+++.+.++++|+||-|..
T Consensus 6 ~~~IG~IG-LG~MG~~mA~nL~~~--G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~-~~a~s~~e~v~~l~~~dvIi~~v~ 81 (493)
T PLN02350 6 LSRIGLAG-LAVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERAKKEGNLPL-YGFKDPEDFVLSIQKPRSVIILVK 81 (493)
T ss_pred CCCEEEEe-eHHHHHHHHHHHHhC--CCeEEEECCCHHHHHHHHHhhhhcCCccc-ccCCCHHHHHhcCCCCCEEEEECC
Confidence 45799999 899999999999997 89999999999998887753110 11100 011233444444445888888763
No 465
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=96.46 E-value=0.0057 Score=60.02 Aligned_cols=76 Identities=25% Similarity=0.363 Sum_probs=51.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEE-----EEeeCCChHHHHHHhcCccEEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEF-----AEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~-----~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
||+|.|+| +|.+|+.++..|++. +++|.+.+|++++.+.+.+... .... ....+....+..+.++++|+||
T Consensus 1 mmkI~iiG-~G~mG~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi 76 (325)
T PRK00094 1 MMKIAVLG-AGSWGTALAIVLARN--GHDVTLWARDPEQAAEINADRE-NPRYLPGIKLPDNLRATTDLAEALADADLIL 76 (325)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHcCc-ccccCCCCcCCCCeEEeCCHHHHHhCCCEEE
Confidence 46899999 599999999999986 7899999999888877765311 0000 0000111123445667899999
Q ss_pred ecCCC
Q 014177 114 HAAGP 118 (429)
Q Consensus 114 ~~agp 118 (429)
-|..+
T Consensus 77 ~~v~~ 81 (325)
T PRK00094 77 VAVPS 81 (325)
T ss_pred EeCCH
Confidence 88764
No 466
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=96.45 E-value=0.029 Score=57.28 Aligned_cols=43 Identities=21% Similarity=0.215 Sum_probs=37.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHH
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMV 82 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~ 82 (429)
|.+++|.|+| .|++|..++..|++. |++|++.|+++++.+.+.
T Consensus 1 m~~~kI~VIG-lG~~G~~~A~~La~~--G~~V~~~D~~~~~v~~l~ 43 (415)
T PRK11064 1 MSFETISVIG-LGYIGLPTAAAFASR--QKQVIGVDINQHAVDTIN 43 (415)
T ss_pred CCccEEEEEC-cchhhHHHHHHHHhC--CCEEEEEeCCHHHHHHHH
Confidence 3458999999 699999999999997 799999999999888754
No 467
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.44 E-value=0.0057 Score=59.74 Aligned_cols=77 Identities=21% Similarity=0.238 Sum_probs=50.3
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCC---cEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKN---SEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~---v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
++|.|+|++|.||+.++..|..++--.++++.|.+ +++..+-++..- ..... ....+++.+.++++|+||-+|
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~--~~~~~~~y~~~~daDivvita 76 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTG--YLGPEELKKALKGADVVVIPA 76 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEE--ecCCCchHHhcCCCCEEEEeC
Confidence 58999998899999999999876323489999987 433322222211 11111 101123456788999999999
Q ss_pred CCCC
Q 014177 117 GPFQ 120 (429)
Q Consensus 117 gp~~ 120 (429)
|...
T Consensus 77 G~~~ 80 (310)
T cd01337 77 GVPR 80 (310)
T ss_pred CCCC
Confidence 8643
No 468
>PLN02602 lactate dehydrogenase
Probab=96.43 E-value=0.0076 Score=59.89 Aligned_cols=89 Identities=18% Similarity=0.088 Sum_probs=58.4
Q ss_pred cccccCCccCCCC--CC-CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC------CcEEEEee
Q 014177 25 ETVLDGAHFQMKN--RN-ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK------NSEFAEVN 95 (429)
Q Consensus 25 ~~~~~~~~~~~~~--~~-~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~------~v~~~~~D 95 (429)
.+..|....+..| +. ++|.|+|+ |.||+.++..|+..+-..++++.|.+.++++..+.++.. .. .+..
T Consensus 20 ~~~~~~~~~~~~m~~~~~~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~- 96 (350)
T PLN02602 20 AFFKPIHNSSPPSPTRRHTKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILA- 96 (350)
T ss_pred hhhhcccccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEe-
Confidence 3444444444434 23 69999995 999999999998764334899999998877665554431 11 1211
Q ss_pred CCChHHHHHHhcCccEEEecCCCCC
Q 014177 96 IYNEGSLLMALRDVDLVVHAAGPFQ 120 (429)
Q Consensus 96 l~d~~~l~~~~~~~DvVi~~agp~~ 120 (429)
-.|. +.++++|+||-+||...
T Consensus 97 ~~dy----~~~~daDiVVitAG~~~ 117 (350)
T PLN02602 97 STDY----AVTAGSDLCIVTAGARQ 117 (350)
T ss_pred CCCH----HHhCCCCEEEECCCCCC
Confidence 1232 23789999999998643
No 469
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.43 E-value=0.051 Score=53.22 Aligned_cols=75 Identities=20% Similarity=0.179 Sum_probs=52.4
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC-----CcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK-----NSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~-----~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
+||.|+|+ |.||+.++..|+..+-..++++.|.+.++++..+.++.. ....+.. -.|.+ .++++|+||.
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~-~~dy~----~~~~adivvi 77 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEA-DKDYS----VTANSKVVIV 77 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEE-CCCHH----HhCCCCEEEE
Confidence 58999995 999999999998864445899999988877665554431 1111221 12332 3789999999
Q ss_pred cCCCCC
Q 014177 115 AAGPFQ 120 (429)
Q Consensus 115 ~agp~~ 120 (429)
++|...
T Consensus 78 taG~~~ 83 (312)
T cd05293 78 TAGARQ 83 (312)
T ss_pred CCCCCC
Confidence 998643
No 470
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=96.42 E-value=0.0057 Score=61.53 Aligned_cols=78 Identities=17% Similarity=0.185 Sum_probs=53.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
.+++|.|+||.|.+|..+++.|.+. |++|++.+|+.. ++..+.++++|+||-|+.
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~--G~~V~~~d~~~~-----------------------~~~~~~~~~aDlVilavP 151 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLS--GYQVRILEQDDW-----------------------DRAEDILADAGMVIVSVP 151 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHC--CCeEEEeCCCcc-----------------------hhHHHHHhcCCEEEEeCc
Confidence 3478999999999999999999997 789999998521 123456678999999985
Q ss_pred CCCCCchHHHHHHHH--HcCCcEEEeCC
Q 014177 118 PFQQAPKCTVLEAAI--ETKTAYIDVCD 143 (429)
Q Consensus 118 p~~~~~~~~v~~aa~--~~gv~~vdis~ 143 (429)
+... ..+++... ..++-.+|+++
T Consensus 152 ~~~~---~~~~~~l~~l~~~~iv~Dv~S 176 (374)
T PRK11199 152 IHLT---EEVIARLPPLPEDCILVDLTS 176 (374)
T ss_pred HHHH---HHHHHHHhCCCCCcEEEECCC
Confidence 4321 23333221 22344566654
No 471
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=96.41 E-value=0.047 Score=56.44 Aligned_cols=95 Identities=16% Similarity=0.219 Sum_probs=63.3
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCCCC
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQ 121 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~ 121 (429)
|.|+| .|.+|+.+++.|++. |++|++.+|++++.+.+.+......... ...+.+++.+.++++|+||-|+.+...
T Consensus 2 IG~IG-LG~MG~~mA~nL~~~--G~~V~v~drt~~~~~~l~~~~~~g~~~~--~~~s~~e~v~~l~~~dvIil~v~~~~~ 76 (467)
T TIGR00873 2 IGVIG-LAVMGSNLALNMADH--GFTVSVYNRTPEKTDEFLAEHAKGKKIV--GAYSIEEFVQSLERPRKIMLMVKAGAP 76 (467)
T ss_pred EEEEe-eHHHHHHHHHHHHhc--CCeEEEEeCCHHHHHHHHhhccCCCCce--ecCCHHHHHhhcCCCCEEEEECCCcHH
Confidence 78898 799999999999997 8999999999999988876421110011 233455565566789998888754321
Q ss_pred CchHHHHHHHH---HcCCcEEEeCC
Q 014177 122 APKCTVLEAAI---ETKTAYIDVCD 143 (429)
Q Consensus 122 ~~~~~v~~aa~---~~gv~~vdis~ 143 (429)
...+++... +.|.-.||.++
T Consensus 77 --v~~Vi~~l~~~L~~g~iIID~gn 99 (467)
T TIGR00873 77 --VDAVINQLLPLLEKGDIIIDGGN 99 (467)
T ss_pred --HHHHHHHHHhhCCCCCEEEECCC
Confidence 134444332 34555677764
No 472
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.38 E-value=0.011 Score=57.02 Aligned_cols=82 Identities=15% Similarity=0.257 Sum_probs=58.2
Q ss_pred ccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccE
Q 014177 32 HFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDL 111 (429)
Q Consensus 32 ~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~Dv 111 (429)
.+...+.+++|+|+|++|.+|+.++..|.+. +..|+++.|... .+.+.++++|+
T Consensus 152 ~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~--gatVtv~~~~t~------------------------~L~~~~~~aDI 205 (283)
T PRK14192 152 AYNIELAGKHAVVVGRSAILGKPMAMMLLNA--NATVTICHSRTQ------------------------NLPELVKQADI 205 (283)
T ss_pred HcCCCCCCCEEEEECCcHHHHHHHHHHHHhC--CCEEEEEeCCch------------------------hHHHHhccCCE
Confidence 3445678899999999889999999999987 678998876321 24445578999
Q ss_pred EEecCCCCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 112 VVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 112 Vi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
|||+.|-.. .+-...++.|.-.+|+..+
T Consensus 206 vI~AtG~~~-----~v~~~~lk~gavViDvg~n 233 (283)
T PRK14192 206 IVGAVGKPE-----LIKKDWIKQGAVVVDAGFH 233 (283)
T ss_pred EEEccCCCC-----cCCHHHcCCCCEEEEEEEe
Confidence 999996221 2222335666667777643
No 473
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=96.37 E-value=0.026 Score=58.56 Aligned_cols=101 Identities=21% Similarity=0.309 Sum_probs=67.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCC--------------hH---
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYN--------------EG--- 100 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d--------------~~--- 100 (429)
...+++|+| +|.+|...+..+... |..|++.+++.++++.... ++ .+++..|..+ ..
T Consensus 163 p~akVlViG-aG~iGl~Aa~~ak~l--GA~V~v~d~~~~rle~a~~-lG--a~~v~v~~~e~g~~~~gYa~~~s~~~~~~ 236 (511)
T TIGR00561 163 PPAKVLVIG-AGVAGLAAIGAANSL--GAIVRAFDTRPEVKEQVQS-MG--AEFLELDFKEEGGSGDGYAKVMSEEFIAA 236 (511)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH-cC--CeEEeccccccccccccceeecCHHHHHH
Confidence 457999999 599999999999887 7789999999987665543 53 4555555421 11
Q ss_pred ---HHHHHhcCccEEEecC---CC-CCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 101 ---SLLMALRDVDLVVHAA---GP-FQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 101 ---~l~~~~~~~DvVi~~a---gp-~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
.+.+.++++|+||+++ |- ....-+... -...+.|...+|++.+.
T Consensus 237 ~~~~~~e~~~~~DIVI~TalipG~~aP~Lit~em-v~~MKpGsvIVDlA~d~ 287 (511)
T TIGR00561 237 EMELFAAQAKEVDIIITTALIPGKPAPKLITEEM-VDSMKAGSVIVDLAAEQ 287 (511)
T ss_pred HHHHHHHHhCCCCEEEECcccCCCCCCeeehHHH-HhhCCCCCEEEEeeeCC
Confidence 1445567899999999 31 110011222 34556777889998654
No 474
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.37 E-value=0.025 Score=58.82 Aligned_cols=91 Identities=24% Similarity=0.211 Sum_probs=58.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHhC-CCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTLG-KNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
.+.+++|+|+|+ |.+|..+++.|.++ |++|++.+++.. ....+.+.+. ..+++...+-.. ...++|+||
T Consensus 13 ~~~~~~v~viG~-G~~G~~~A~~L~~~--G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~------~~~~~D~Vv 83 (480)
T PRK01438 13 DWQGLRVVVAGL-GVSGFAAADALLEL--GARVTVVDDGDDERHRALAAILEALGATVRLGPGPT------LPEDTDLVV 83 (480)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHC--CCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc------ccCCCCEEE
Confidence 466789999995 78999999999987 789999986543 2222223222 235554332111 234799999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCcE
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTAY 138 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~~ 138 (429)
-+.|.... .+++..|.+.|++.
T Consensus 84 ~s~Gi~~~---~~~~~~a~~~gi~v 105 (480)
T PRK01438 84 TSPGWRPD---APLLAAAADAGIPV 105 (480)
T ss_pred ECCCcCCC---CHHHHHHHHCCCee
Confidence 88875443 34555555555543
No 475
>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively. This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.
Probab=96.36 E-value=0.037 Score=53.42 Aligned_cols=96 Identities=16% Similarity=0.154 Sum_probs=56.2
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch---------------------hHHHHHH---HhCCCcEE--EEe
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE---------------------KGAAMVS---TLGKNSEF--AEV 94 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~---------------------~~~~l~~---~l~~~v~~--~~~ 94 (429)
+|+|+|+ |.+|+.+++.|+..+-+ +++++|.+.- |++..++ ++.+.++. +..
T Consensus 1 kVLIvGa-GGLGs~vA~~La~aGVg-~ItlvD~D~Ve~sNL~RQ~L~~~~D~~iGk~Ka~aaa~~L~~iNP~v~v~~~~~ 78 (307)
T cd01486 1 KCLLLGA-GTLGCNVARNLLGWGVR-HITFVDSGKVSYSNPVRQSLFTFEDCKGGKPKAEAAAERLKEIFPSIDATGIVL 78 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCC-eEEEECCCEeccccCCcccccccchhhcCccHHHHHHHHHHHHCCCcEEEEeee
Confidence 5899996 66999999999997433 7888774321 1111222 22223332 222
Q ss_pred eC----------------CChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEE
Q 014177 95 NI----------------YNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYID 140 (429)
Q Consensus 95 Dl----------------~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vd 140 (429)
.+ .+.+.+.++++++|+||.|...+... .-+-.+|.+.++..++
T Consensus 79 ~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~d~tDn~esR--~L~~~~~~~~~k~~I~ 138 (307)
T cd01486 79 SIPMPGHPISESEVPSTLKDVKRLEELIKDHDVIFLLTDSRESR--WLPTLLSAAKNKLVIN 138 (307)
T ss_pred eccccccccccccccccccCHHHHHHHHhhCCEEEECCCCHHHH--HHHHHHHHHhCCcEEE
Confidence 22 24556777777888888887544321 3344566666666664
No 476
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=96.35 E-value=0.0081 Score=59.05 Aligned_cols=80 Identities=16% Similarity=0.053 Sum_probs=51.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCc-----eEEEEecCc--hhHHHHHHHhCCCc-EEEE-eeCCChHHHHHHhcCc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDL-----QIVVGSRNR--EKGAAMVSTLGKNS-EFAE-VNIYNEGSLLMALRDV 109 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-----~v~v~~R~~--~~~~~l~~~l~~~v-~~~~-~Dl~d~~~l~~~~~~~ 109 (429)
+.+|.|+|++|.||+.++..|..++--. ++++.|.+. ++++..+.++..-. .... ..+. ....+.++++
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~~~~~~da 80 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT--TDPEEAFKDV 80 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe--cChHHHhCCC
Confidence 4689999998999999999998763222 799999854 44554443332111 0000 0111 1224567899
Q ss_pred cEEEecCCCCC
Q 014177 110 DLVVHAAGPFQ 120 (429)
Q Consensus 110 DvVi~~agp~~ 120 (429)
|+||.+||...
T Consensus 81 DvVVitAG~~~ 91 (323)
T TIGR01759 81 DAALLVGAFPR 91 (323)
T ss_pred CEEEEeCCCCC
Confidence 99999998643
No 477
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=96.35 E-value=0.015 Score=53.12 Aligned_cols=39 Identities=21% Similarity=0.372 Sum_probs=33.1
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecC
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRN 74 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~ 74 (429)
.++.++.++|+|+|+ |.+|+.++..|++. |+ ++++.|++
T Consensus 15 ~q~~L~~~~V~IvG~-GglGs~ia~~La~~--Gvg~i~lvD~D 54 (200)
T TIGR02354 15 IVQKLEQATVAICGL-GGLGSNVAINLARA--GIGKLILVDFD 54 (200)
T ss_pred HHHHHhCCcEEEECc-CHHHHHHHHHHHHc--CCCEEEEECCC
Confidence 455678899999996 66999999999997 66 79999887
No 478
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=96.34 E-value=0.014 Score=59.28 Aligned_cols=68 Identities=22% Similarity=0.173 Sum_probs=50.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+.+++|+|+| +|.+|+.+++.|... |.+|++.++++.+...... . .++. .+ ++++++++|+||.+.
T Consensus 210 l~Gk~VlViG-~G~IG~~vA~~lr~~--Ga~ViV~d~dp~ra~~A~~-~--G~~v-----~~---l~eal~~aDVVI~aT 275 (425)
T PRK05476 210 IAGKVVVVAG-YGDVGKGCAQRLRGL--GARVIVTEVDPICALQAAM-D--GFRV-----MT---MEEAAELGDIFVTAT 275 (425)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhC--CCEEEEEcCCchhhHHHHh-c--CCEe-----cC---HHHHHhCCCEEEECC
Confidence 5789999999 699999999999987 7899999999877543322 1 2221 12 345677999999987
Q ss_pred CC
Q 014177 117 GP 118 (429)
Q Consensus 117 gp 118 (429)
|.
T Consensus 276 G~ 277 (425)
T PRK05476 276 GN 277 (425)
T ss_pred CC
Confidence 63
No 479
>PRK10206 putative oxidoreductase; Provisional
Probab=96.32 E-value=0.1 Score=51.93 Aligned_cols=143 Identities=13% Similarity=0.062 Sum_probs=81.8
Q ss_pred CeEEEEcCChHHHH-HHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEec
Q 014177 40 ARVLVLGGTGRVGG-STAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHA 115 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~-~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ 115 (429)
.||.|+| +|.++. ..+..+....++++++ ++++++++. +..+.++ .+ .. .++++++++ ++|+|+.|
T Consensus 2 irvgiiG-~G~~~~~~h~~~~~~~~~~~~l~av~d~~~~~~-~~~~~~~-~~-----~~--~~~~~ell~~~~iD~V~I~ 71 (344)
T PRK10206 2 INCAFIG-FGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPE-EQAPIYS-HI-----HF--TSDLDEVLNDPDVKLVVVC 71 (344)
T ss_pred eEEEEEC-CCHHHhheehhhHhcCCCCEEEEEEEcCChhHH-HHHHhcC-CC-----cc--cCCHHHHhcCCCCCEEEEe
Confidence 5899999 587765 3345454433467775 567776543 4444332 11 11 123455564 78999998
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEE---eCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcC
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYID---VCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESK 192 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vd---is~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~ 192 (429)
..+... ..++..|+++|.|.+- ++.+ ......+.+.++++|+.+..+.-.-+...-..++.+++. -..
T Consensus 72 tp~~~H---~~~~~~al~aGkhVl~EKPla~~---~~ea~~l~~~a~~~~~~l~v~~~~R~~p~~~~~k~li~~---g~i 142 (344)
T PRK10206 72 THADSH---FEYAKRALEAGKNVLVEKPFTPT---LAEAKELFALAKSKGLTVTPYQNRRFDSCFLTAKKAIES---GKL 142 (344)
T ss_pred CCchHH---HHHHHHHHHcCCcEEEecCCcCC---HHHHHHHHHHHHHhCCEEEEEEeeeECHHHHHHHHHHHc---CCC
Confidence 765433 6889999999988762 1111 234446667788888876655332233333344555542 234
Q ss_pred CCCeEEEEE
Q 014177 193 GEPERLRFS 201 (429)
Q Consensus 193 ~~v~~i~~~ 201 (429)
.++..++..
T Consensus 143 G~i~~i~~~ 151 (344)
T PRK10206 143 GEIVEVESH 151 (344)
T ss_pred CCeEEEEEE
Confidence 455556553
No 480
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=96.30 E-value=0.024 Score=57.44 Aligned_cols=68 Identities=21% Similarity=0.245 Sum_probs=50.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+.+++|+|+| +|.||+.+++.+... |.+|++.++++.++.... ..+ ++.. + +++.++++|+||.|+
T Consensus 200 l~GktVvViG-~G~IG~~va~~ak~~--Ga~ViV~d~d~~R~~~A~-~~G--~~~~-----~---~~e~v~~aDVVI~at 265 (413)
T cd00401 200 IAGKVAVVAG-YGDVGKGCAQSLRGQ--GARVIVTEVDPICALQAA-MEG--YEVM-----T---MEEAVKEGDIFVTTT 265 (413)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHC--CCEEEEEECChhhHHHHH-hcC--CEEc-----c---HHHHHcCCCEEEECC
Confidence 5678999999 689999999999886 789999999988765433 222 3222 1 234567899999987
Q ss_pred CC
Q 014177 117 GP 118 (429)
Q Consensus 117 gp 118 (429)
|.
T Consensus 266 G~ 267 (413)
T cd00401 266 GN 267 (413)
T ss_pred CC
Confidence 63
No 481
>PRK06270 homoserine dehydrogenase; Provisional
Probab=96.30 E-value=0.18 Score=50.05 Aligned_cols=127 Identities=20% Similarity=0.183 Sum_probs=71.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHc--------CCCceEE-EEecC----------chhHHHHHHHhCCCcEEEEeeCCCh
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKL--------CPDLQIV-VGSRN----------REKGAAMVSTLGKNSEFAEVNIYNE 99 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~--------~~g~~v~-v~~R~----------~~~~~~l~~~l~~~v~~~~~Dl~d~ 99 (429)
..+|.|+| +|.||+.+++.|.++ +.+.+|+ +++++ .+++....+..+ .+.... +....
T Consensus 2 ~i~V~IiG-~G~VG~~~~~~L~~~~~~~~~~~g~~~~vvai~d~~~~~~~~~Gi~~~~~~~~~~~~~-~~~~~~-~~~~~ 78 (341)
T PRK06270 2 EMKIALIG-FGGVGQGVAELLAEKREYLKKRYGLDLKVVAIADSSGSAIDPDGLDLELALKVKEETG-KLADYP-EGGGE 78 (341)
T ss_pred eEEEEEEC-CCHHHHHHHHHHHHhHHHHHHHcCCCEEEEEEEeCCCcccCcCCCCHHHHHHHHhccC-CcccCc-ccccc
Confidence 46899999 699999999998764 1145554 34542 222222222211 111000 00001
Q ss_pred HHHHHHhc--CccEEEecCCCCCC--CchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecC
Q 014177 100 GSLLMALR--DVDLVVHAAGPFQQ--APKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTG 169 (429)
Q Consensus 100 ~~l~~~~~--~~DvVi~~agp~~~--~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~ 169 (429)
.++.+++. ++|+||.|.++... ......+..|+++|+|.|-.+- .........+.+.++++|..+...+
T Consensus 79 ~d~~ell~~~~~DvVvd~T~s~~~~~~~a~~~~~~aL~~GkhVVtaNK-~pla~~~~eL~~~A~~~g~~~~~ea 151 (341)
T PRK06270 79 ISGLEVIRSVDADVVVEATPTNIETGEPALSHCRKALERGKHVVTSNK-GPLALAYKELKELAKKNGVRFRYEA 151 (341)
T ss_pred CCHHHHhhccCCCEEEECCcCcccccchHHHHHHHHHHCCCEEEcCCc-HHHHhhHHHHHHHHHHcCCEEEEee
Confidence 12344453 68999999875321 1125678899999999884432 1111223466777888888776543
No 482
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=96.30 E-value=0.0084 Score=58.82 Aligned_cols=77 Identities=27% Similarity=0.309 Sum_probs=53.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCc---EEEEeeCCChHHHHHHhcCccEEEe
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNS---EFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v---~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
.++||.|+|+ |.||+.++..|..++--.++.+.|++.++++..+.++..-. .-...-..+. +.++++|+||.
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~----~~~~~adivIi 79 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDY----SDCKDADLVVI 79 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCH----HHhCCCCEEEE
Confidence 3479999997 99999999999886322289999999988776665553110 0011111232 34789999999
Q ss_pred cCCCC
Q 014177 115 AAGPF 119 (429)
Q Consensus 115 ~agp~ 119 (429)
++|..
T Consensus 80 tag~~ 84 (315)
T PRK00066 80 TAGAP 84 (315)
T ss_pred ecCCC
Confidence 99864
No 483
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=96.30 E-value=0.0089 Score=57.59 Aligned_cols=68 Identities=25% Similarity=0.302 Sum_probs=49.0
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+|.|+| .|.+|..++..|.+. +++|++.+|+++..+...+. + .+.. ...+ . +.++++|+||-|..+.
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~--g~~V~~~d~~~~~~~~a~~~-g-~~~~---~~~~---~-~~~~~aDlVilavp~~ 68 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSL--GHTVYGVSRRESTCERAIER-G-LVDE---ASTD---L-SLLKDCDLVILALPIG 68 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHC-C-Cccc---ccCC---H-hHhcCCCEEEEcCCHH
Confidence 4799999 799999999999987 78999999998877765542 1 1110 0111 2 2467899999998653
No 484
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=96.27 E-value=0.018 Score=51.91 Aligned_cols=71 Identities=11% Similarity=0.129 Sum_probs=40.8
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHH----HHHHhcCccEEEecC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGS----LLMALRDVDLVVHAA 116 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~----l~~~~~~~DvVi~~a 116 (429)
|.+=--.+|..|.++++.+..+ |++|+++..... +. .+..++.+. +...++ +.+.+.++|++|++|
T Consensus 21 R~ItN~SSG~~G~~lA~~~~~~--Ga~V~li~g~~~-~~-----~p~~~~~i~--v~sa~em~~~~~~~~~~~Di~I~aA 90 (185)
T PF04127_consen 21 RFITNRSSGKMGAALAEEAARR--GAEVTLIHGPSS-LP-----PPPGVKVIR--VESAEEMLEAVKELLPSADIIIMAA 90 (185)
T ss_dssp EEEEES--SHHHHHHHHHHHHT--T-EEEEEE-TTS----------TTEEEEE---SSHHHHHHHHHHHGGGGSEEEE-S
T ss_pred eEecCCCcCHHHHHHHHHHHHC--CCEEEEEecCcc-cc-----ccccceEEE--ecchhhhhhhhccccCcceeEEEec
Confidence 3333345789999999999998 899998876532 11 123455554 444444 444455799999999
Q ss_pred CCCCC
Q 014177 117 GPFQQ 121 (429)
Q Consensus 117 gp~~~ 121 (429)
++...
T Consensus 91 AVsDf 95 (185)
T PF04127_consen 91 AVSDF 95 (185)
T ss_dssp B--SE
T ss_pred chhhe
Confidence 87543
No 485
>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p. This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.
Probab=96.25 E-value=0.024 Score=59.94 Aligned_cols=38 Identities=24% Similarity=0.315 Sum_probs=30.9
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN 74 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~ 74 (429)
+.++..+|+|+|+ |.+|+.+++.|+..+-+ +++++|.+
T Consensus 334 ekL~~~kVLIvGa-GGLGs~VA~~La~~GVg-~ItlVD~D 371 (664)
T TIGR01381 334 ERYSQLKVLLLGA-GTLGCNVARCLIGWGVR-HITFVDNG 371 (664)
T ss_pred HHHhcCeEEEECC-cHHHHHHHHHHHHcCCC-eEEEEcCC
Confidence 5577889999996 66999999999998432 78888754
No 486
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=96.24 E-value=0.044 Score=52.65 Aligned_cols=66 Identities=24% Similarity=0.351 Sum_probs=48.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
++|.++| .|.+|...+..|++. |+++++.+|++++..+.....+. .. .++..++.+++|+||.|..
T Consensus 1 ~kIafIG-LG~MG~pmA~~L~~a--G~~v~v~~r~~~ka~~~~~~~Ga--~~-------a~s~~eaa~~aDvVitmv~ 66 (286)
T COG2084 1 MKIAFIG-LGIMGSPMAANLLKA--GHEVTVYNRTPEKAAELLAAAGA--TV-------AASPAEAAAEADVVITMLP 66 (286)
T ss_pred CeEEEEc-CchhhHHHHHHHHHC--CCEEEEEeCChhhhhHHHHHcCC--cc-------cCCHHHHHHhCCEEEEecC
Confidence 4789999 899999999999998 89999999999995444433221 11 1223456667888888764
No 487
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.23 E-value=0.019 Score=46.52 Aligned_cols=85 Identities=22% Similarity=0.179 Sum_probs=56.5
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++++++|+|+|| |-+|..-++.|++. |.+|++.+.+.+ ... +.+++..-++ ++.+++.|+||-+
T Consensus 4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~--gA~v~vis~~~~---~~~----~~i~~~~~~~------~~~l~~~~lV~~a 67 (103)
T PF13241_consen 4 DLKGKRVLVVGG-GPVAARKARLLLEA--GAKVTVISPEIE---FSE----GLIQLIRREF------EEDLDGADLVFAA 67 (103)
T ss_dssp --TT-EEEEEEE-SHHHHHHHHHHCCC--TBEEEEEESSEH---HHH----TSCEEEESS-------GGGCTTESEEEE-
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhC--CCEEEEECCchh---hhh----hHHHHHhhhH------HHHHhhheEEEec
Confidence 367899999996 88999999999997 799999988761 111 3566554443 2347789999977
Q ss_pred CCCCCCCchHHHHHHHHHcCCcE
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAY 138 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~ 138 (429)
.+.... +..+.+.|.+.++..
T Consensus 68 t~d~~~--n~~i~~~a~~~~i~v 88 (103)
T PF13241_consen 68 TDDPEL--NEAIYADARARGILV 88 (103)
T ss_dssp SS-HHH--HHHHHHHHHHTTSEE
T ss_pred CCCHHH--HHHHHHHHhhCCEEE
Confidence 543221 256777787777544
No 488
>PRK06223 malate dehydrogenase; Reviewed
Probab=96.22 E-value=0.01 Score=58.03 Aligned_cols=76 Identities=17% Similarity=0.185 Sum_probs=50.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCC--cE--EEEeeC-CChHHHHHHhcCccEEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKN--SE--FAEVNI-YNEGSLLMALRDVDLVV 113 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~--v~--~~~~Dl-~d~~~l~~~~~~~DvVi 113 (429)
|++|.|+|+ |.+|+.++..++..+-+ +|++.|+++++++.....+... .. ...+.. .| . +.++++|+||
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~-ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d---~-~~~~~aDiVi 75 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELG-DVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTND---Y-EDIAGSDVVV 75 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCe-EEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCC---H-HHHCCCCEEE
Confidence 479999997 99999999999886323 9999999888765543322110 00 011111 23 2 2468999999
Q ss_pred ecCCCCC
Q 014177 114 HAAGPFQ 120 (429)
Q Consensus 114 ~~agp~~ 120 (429)
.++|...
T Consensus 76 i~~~~p~ 82 (307)
T PRK06223 76 ITAGVPR 82 (307)
T ss_pred ECCCCCC
Confidence 9987533
No 489
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.22 E-value=0.022 Score=54.69 Aligned_cols=81 Identities=17% Similarity=0.270 Sum_probs=60.5
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
.-++.+++|+|+|.++.+|+.++..|.++ +..|+++.++. ..+.+.++++|+||
T Consensus 153 ~i~l~Gk~vvVIGrs~~VG~pla~lL~~~--gatVtv~~s~t------------------------~~l~~~~~~ADIVI 206 (286)
T PRK14175 153 DIDLEGKNAVVIGRSHIVGQPVSKLLLQK--NASVTILHSRS------------------------KDMASYLKDADVIV 206 (286)
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHC--CCeEEEEeCCc------------------------hhHHHHHhhCCEEE
Confidence 34588999999999889999999999987 78999887532 13667788999999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
.++|-..... ..-++.|.-.||++...
T Consensus 207 sAvg~p~~i~-----~~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 207 SAVGKPGLVT-----KDVVKEGAVIIDVGNTP 233 (286)
T ss_pred ECCCCCcccC-----HHHcCCCcEEEEcCCCc
Confidence 9997543211 12245676778887654
No 490
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=96.21 E-value=0.06 Score=56.05 Aligned_cols=102 Identities=19% Similarity=0.276 Sum_probs=65.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCCh-------------H---
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNE-------------G--- 100 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~-------------~--- 100 (429)
..+.+|+|+|+ |-+|...+..+... |.+|++.|+++++++... +++ .+++..|..+. +
T Consensus 163 ~pg~kVlViGa-G~iGL~Ai~~Ak~l--GA~V~a~D~~~~rle~ae-slG--A~~v~i~~~e~~~~~~gya~~~s~~~~~ 236 (509)
T PRK09424 163 VPPAKVLVIGA-GVAGLAAIGAAGSL--GAIVRAFDTRPEVAEQVE-SMG--AEFLELDFEEEGGSGDGYAKVMSEEFIK 236 (509)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH-HcC--CeEEEeccccccccccchhhhcchhHHH
Confidence 34689999995 88999999998886 789999999999877554 454 34444443221 1
Q ss_pred H----HHHHhcCccEEEecCCCCCCCchHHHHHHH---HHcCCcEEEeCCC
Q 014177 101 S----LLMALRDVDLVVHAAGPFQQAPKCTVLEAA---IETKTAYIDVCDD 144 (429)
Q Consensus 101 ~----l~~~~~~~DvVi~~agp~~~~~~~~v~~aa---~~~gv~~vdis~~ 144 (429)
. +.+..+++|+||.|++........-+.+.+ .+.|...+|++.+
T Consensus 237 ~~~~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~ 287 (509)
T PRK09424 237 AEMALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAE 287 (509)
T ss_pred HHHHHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccC
Confidence 1 122235799999999743211101112333 3456778888754
No 491
>PRK06141 ornithine cyclodeaminase; Validated
Probab=96.20 E-value=0.0096 Score=58.43 Aligned_cols=94 Identities=24% Similarity=0.302 Sum_probs=63.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC-CcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK-NSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~-~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
..++++|+| +|.+|+..++.+....+..+|.+.+|++++.+++.+++.. ...... .++.+++++++|+|++|.
T Consensus 124 ~~~~v~iiG-~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~-----~~~~~~av~~aDIVi~aT 197 (314)
T PRK06141 124 DASRLLVVG-TGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEV-----VTDLEAAVRQADIISCAT 197 (314)
T ss_pred CCceEEEEC-CcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEE-----eCCHHHHHhcCCEEEEee
Confidence 457899999 6889999998776633457899999999999998887642 111221 233556778999998876
Q ss_pred CCCCCCchHHHHH-HHHHcCCcEEEeCC
Q 014177 117 GPFQQAPKCTVLE-AAIETKTAYIDVCD 143 (429)
Q Consensus 117 gp~~~~~~~~v~~-aa~~~gv~~vdis~ 143 (429)
... .++++ ..++.|. .|+..+
T Consensus 198 ~s~-----~pvl~~~~l~~g~-~i~~ig 219 (314)
T PRK06141 198 LST-----EPLVRGEWLKPGT-HLDLVG 219 (314)
T ss_pred CCC-----CCEecHHHcCCCC-EEEeeC
Confidence 522 23332 3456677 454443
No 492
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=96.19 E-value=0.0064 Score=59.45 Aligned_cols=75 Identities=21% Similarity=0.248 Sum_probs=49.7
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHH-------h-C-CCcE-----EEEeeCCChHHHHHH
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVST-------L-G-KNSE-----FAEVNIYNEGSLLMA 105 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~-------l-~-~~v~-----~~~~Dl~d~~~l~~~ 105 (429)
++|.|+| .|.+|+.++..|++. |++|++.+|++++.+...+. + . +.+. .....+.-..++.++
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~--G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a 79 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARA--GHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADA 79 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHC--CCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHh
Confidence 5899999 699999999999997 89999999998776653321 1 0 0000 000001111235566
Q ss_pred hcCccEEEecCC
Q 014177 106 LRDVDLVVHAAG 117 (429)
Q Consensus 106 ~~~~DvVi~~ag 117 (429)
++++|+|+.|..
T Consensus 80 ~~~ad~Vi~avp 91 (308)
T PRK06129 80 VADADYVQESAP 91 (308)
T ss_pred hCCCCEEEECCc
Confidence 788999998874
No 493
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.18 E-value=0.013 Score=57.71 Aligned_cols=77 Identities=25% Similarity=0.275 Sum_probs=52.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC-----CcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK-----NSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~-----~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
+|+|.|+| +|.+|..++..|.+. +++|++.+|++++.+.+...... .... ...+.-..++.+.++++|+||
T Consensus 4 ~m~I~iIG-~G~mG~~ia~~L~~~--G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~-~~~~~~~~~~~e~~~~aD~Vi 79 (328)
T PRK14618 4 GMRVAVLG-AGAWGTALAVLAASK--GVPVRLWARRPEFAAALAAERENREYLPGVAL-PAELYPTADPEEALAGADFAV 79 (328)
T ss_pred CCeEEEEC-cCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHhCcccccCCCCcC-CCCeEEeCCHHHHHcCCCEEE
Confidence 35899999 599999999999987 78999999998887777643110 1000 000111123445667899999
Q ss_pred ecCCCC
Q 014177 114 HAAGPF 119 (429)
Q Consensus 114 ~~agp~ 119 (429)
-|....
T Consensus 80 ~~v~~~ 85 (328)
T PRK14618 80 VAVPSK 85 (328)
T ss_pred EECchH
Confidence 887543
No 494
>TIGR01761 thiaz-red thiazolinyl imide reductase. This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG).
Probab=96.17 E-value=0.065 Score=53.11 Aligned_cols=114 Identities=13% Similarity=0.132 Sum_probs=75.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCC-CceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCP-DLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~-g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
..+|.|+|+ |+ |+.-++.+.+. + +++++ +++++.+++++++++++ +. . .+| ++++++++|+++-+.
T Consensus 3 ~~rVgViG~-~~-G~~h~~al~~~-~~~~eLvaV~d~~~erA~~~A~~~g--i~-~---y~~---~eell~d~Di~~V~i 70 (343)
T TIGR01761 3 VQSVVVCGT-RF-GQFYLAAFAAA-PERFELAGILAQGSERSRALAHRLG--VP-L---YCE---VEELPDDIDIACVVV 70 (343)
T ss_pred CcEEEEEeH-HH-HHHHHHHHHhC-CCCcEEEEEEcCCHHHHHHHHHHhC--CC-c---cCC---HHHHhcCCCEEEEEe
Confidence 478999997 75 98888888774 4 56665 56899999999988775 22 1 234 445566666555443
Q ss_pred C---CCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEec
Q 014177 117 G---PFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITT 168 (429)
Q Consensus 117 g---p~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~ 168 (429)
. |... . ..++.+|+++|+|.+-= .+-...+...+-+.++++|+.+..+
T Consensus 71 pt~~P~~~-H-~e~a~~aL~aGkHVL~E--KPla~~Ea~el~~~A~~~g~~l~v~ 121 (343)
T TIGR01761 71 RSAIVGGQ-G-SALARALLARGIHVLQE--HPLHPRDIQDLLRLAERQGRRYLVN 121 (343)
T ss_pred CCCCCCcc-H-HHHHHHHHhCCCeEEEc--CCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 2 2111 2 68899999999987621 1111345557777888888877653
No 495
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=96.17 E-value=0.04 Score=54.32 Aligned_cols=94 Identities=18% Similarity=0.166 Sum_probs=62.1
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCCh---HHHHHHh-cCccEEEe
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNE---GSLLMAL-RDVDLVVH 114 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~---~~l~~~~-~~~DvVi~ 114 (429)
.+|+|.||+|.+|..+++.+... |. +|++.+++.++.+.+.++++. +. ..|..+. +.+.++. +++|+|++
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~--G~~~Vi~~~~s~~~~~~~~~~lGa--~~-vi~~~~~~~~~~i~~~~~~gvd~vid 230 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLL--GCSRVVGICGSDEKCQLLKSELGF--DA-AINYKTDNVAERLRELCPEGVDVYFD 230 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHc--CCCEEEEEcCCHHHHHHHHHhcCC--cE-EEECCCCCHHHHHHHHCCCCceEEEE
Confidence 79999999999999999877765 77 799888888887776665542 22 2333332 2233332 36999999
Q ss_pred cCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 115 AAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
++|... ..-.-.|++.+-+++.++
T Consensus 231 ~~g~~~----~~~~~~~l~~~G~iv~~G 254 (345)
T cd08293 231 NVGGEI----SDTVISQMNENSHIILCG 254 (345)
T ss_pred CCCcHH----HHHHHHHhccCCEEEEEe
Confidence 987421 122234556666777654
No 496
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=96.15 E-value=0.0068 Score=59.34 Aligned_cols=75 Identities=31% Similarity=0.404 Sum_probs=48.9
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc--hhHHHHHHHhCC-----CcEEEEeeCCChHHHHHHhcCccEE
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR--EKGAAMVSTLGK-----NSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~--~~~~~l~~~l~~-----~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
|+|.|+|++|.+|+.++..|+..+...+|+++||+. ++++.....+.. ... ..+..++. . +.++++|+|
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~-~~i~~~~d--~-~~l~~aDiV 76 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGID-AEIKISSD--L-SDVAGSDIV 76 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCC-cEEEECCC--H-HHhCCCCEE
Confidence 589999999999999999999873233699999954 444433222211 111 12222211 2 247899999
Q ss_pred EecCCC
Q 014177 113 VHAAGP 118 (429)
Q Consensus 113 i~~agp 118 (429)
|-++|.
T Consensus 77 iitag~ 82 (309)
T cd05294 77 IITAGV 82 (309)
T ss_pred EEecCC
Confidence 999984
No 497
>PLN02928 oxidoreductase family protein
Probab=96.15 E-value=0.016 Score=57.63 Aligned_cols=80 Identities=14% Similarity=0.103 Sum_probs=52.5
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
..+.+++++|+| .|.||+.+++.|... |.+|++.+|+..+.......++ ..+...........+++++++++|+|+
T Consensus 155 ~~l~gktvGIiG-~G~IG~~vA~~l~af--G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVv 231 (347)
T PLN02928 155 DTLFGKTVFILG-YGAIGIELAKRLRPF--GVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVV 231 (347)
T ss_pred cCCCCCEEEEEC-CCHHHHHHHHHHhhC--CCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEE
Confidence 458899999999 799999999999876 8999999987432111000000 000000001113456889999999999
Q ss_pred ecCC
Q 014177 114 HAAG 117 (429)
Q Consensus 114 ~~ag 117 (429)
.++.
T Consensus 232 l~lP 235 (347)
T PLN02928 232 LCCT 235 (347)
T ss_pred ECCC
Confidence 9874
No 498
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.14 E-value=0.044 Score=57.19 Aligned_cols=89 Identities=21% Similarity=0.227 Sum_probs=60.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+.+++|+|+| .|..|..+++.|.++ |++|++.|+++...+.+.+ . .+.+...+ +. .+.++++|+||...
T Consensus 10 ~~~~~v~V~G-~G~sG~aa~~~L~~~--G~~v~~~D~~~~~~~~l~~-~--g~~~~~~~--~~---~~~l~~~D~VV~Sp 78 (488)
T PRK03369 10 LPGAPVLVAG-AGVTGRAVLAALTRF--GARPTVCDDDPDALRPHAE-R--GVATVSTS--DA---VQQIADYALVVTSP 78 (488)
T ss_pred cCCCeEEEEc-CCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHh-C--CCEEEcCc--ch---HhHhhcCCEEEECC
Confidence 4568999999 588999999988887 8999999977655444322 2 34443221 11 22356789999988
Q ss_pred CCCCCCchHHHHHHHHHcCCcEE
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYI 139 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~v 139 (429)
|.... .+.++++.+.|++.+
T Consensus 79 Gi~~~---~p~~~~a~~~gi~v~ 98 (488)
T PRK03369 79 GFRPT---APVLAAAAAAGVPIW 98 (488)
T ss_pred CCCCC---CHHHHHHHHCCCcEe
Confidence 75443 467777777776554
No 499
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=96.12 E-value=0.039 Score=56.62 Aligned_cols=69 Identities=23% Similarity=0.257 Sum_probs=51.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
.+.+++|+|+| +|.||+.+++.|... |.+|++.++++.+...... ..++.. .+.++++.+|+||.+
T Consensus 251 ~LaGKtVgVIG-~G~IGr~vA~rL~a~--Ga~ViV~e~dp~~a~~A~~---~G~~~~--------~leell~~ADIVI~a 316 (476)
T PTZ00075 251 MIAGKTVVVCG-YGDVGKGCAQALRGF--GARVVVTEIDPICALQAAM---EGYQVV--------TLEDVVETADIFVTA 316 (476)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHC--CCEEEEEeCCchhHHHHHh---cCceec--------cHHHHHhcCCEEEEC
Confidence 57889999999 789999999999886 8899999888766432221 122221 255677899999998
Q ss_pred CCC
Q 014177 116 AGP 118 (429)
Q Consensus 116 agp 118 (429)
.|.
T Consensus 317 tGt 319 (476)
T PTZ00075 317 TGN 319 (476)
T ss_pred CCc
Confidence 763
No 500
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.12 E-value=0.037 Score=57.30 Aligned_cols=95 Identities=17% Similarity=0.109 Sum_probs=61.3
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHhC-CCcEEEEeeCCChHHHHHHhcCccE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTLG-KNSEFAEVNIYNEGSLLMALRDVDL 111 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~~~Dv 111 (429)
.+.+.+++|+|+| .|..|..+++.|.+. |++|++.|++.. ......+.+. ..+.+...+-. . +.+.++|+
T Consensus 9 ~~~~~~~~i~v~G-~G~sG~a~a~~L~~~--G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~~~~~-~----~~~~~~dl 80 (458)
T PRK01710 9 KKFIKNKKVAVVG-IGVSNIPLIKFLVKL--GAKVTAFDKKSEEELGEVSNELKELGVKLVLGENY-L----DKLDGFDV 80 (458)
T ss_pred hhhhcCCeEEEEc-ccHHHHHHHHHHHHC--CCEEEEECCCCCccchHHHHHHHhCCCEEEeCCCC-h----HHhccCCE
Confidence 3346778999999 688999999999987 899999997643 1111111121 23444433221 1 23467999
Q ss_pred EEecCCCCCCCchHHHHHHHHHcCCcEE
Q 014177 112 VVHAAGPFQQAPKCTVLEAAIETKTAYI 139 (429)
Q Consensus 112 Vi~~agp~~~~~~~~v~~aa~~~gv~~v 139 (429)
||...|.... .+.+.+|.+.|++.+
T Consensus 81 VV~Spgi~~~---~p~~~~a~~~~i~i~ 105 (458)
T PRK01710 81 IFKTPSMRID---SPELVKAKEEGAYIT 105 (458)
T ss_pred EEECCCCCCC---chHHHHHHHcCCcEE
Confidence 9998664432 467777877776654
Done!