Query 014181
Match_columns 429
No_of_seqs 150 out of 236
Neff 4.5
Searched_HMMs 13730
Date Mon Mar 25 06:56:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014181.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014181hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1eucb1 c.23.4.1 (B:246-393) S 8.3 53 0.0038 27.1 1.0 63 321-385 21-100 (148)
2 d2nu7b1 c.23.4.1 (B:239-388) S 7.3 1.2E+02 0.0088 24.8 2.9 27 321-349 21-47 (150)
3 d2gw6a1 c.52.2.1 (A:2-123) tRN 6.3 54 0.004 26.4 0.1 66 194-277 56-121 (122)
4 d2fsra1 d.108.1.1 (A:4-167) Pr 5.8 1.1E+02 0.008 22.6 1.7 23 394-418 142-164 (164)
5 d1mg7a1 d.14.1.6 (A:14-187) Ea 5.4 90 0.0065 26.1 1.0 70 310-388 25-99 (174)
6 d1wika_ c.47.1.1 (A:) Thioredo 4.8 80 0.0058 23.9 0.2 34 338-371 7-56 (109)
7 d1ex0a1 b.1.18.9 (A:7-190) Tra 3.9 3.9E+02 0.028 22.1 4.1 60 208-278 38-101 (184)
8 d1om4a_ d.174.1.1 (A:) Nitric 3.8 3.2E+02 0.024 25.7 3.8 34 396-429 224-261 (418)
9 d3e7ma1 d.174.1.1 (A:77-497) N 3.7 3.1E+02 0.023 25.8 3.6 34 396-429 225-262 (421)
10 d2qqra1 b.34.9.1 (A:897-955) J 3.7 1.7E+02 0.012 20.6 1.2 22 352-373 14-42 (59)
No 1
>d1eucb1 c.23.4.1 (B:246-393) Succinyl-CoA synthetase, beta-chain, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=8.33 E-value=53 Score=27.11 Aligned_cols=63 Identities=14% Similarity=0.209 Sum_probs=37.2
Q ss_pred eeeecCCCcccchhhHHHHhhhcCCeeeee---c--Cc-eee-------ccCCC--eEEEEE--eccCchHHHHHHHHHh
Q 014181 321 LSRLVNGEDLHLSTTEKKILNTYNEKPVLS---R--PQ-HEF-------YLGEN--YFEIDL--DVHRFSYLSRKTFAAF 383 (429)
Q Consensus 321 Ip~Vvng~wi~l~~~~r~l~~avn~KPvLi---r--~~-~~y-------~~G~n--YlEiDv--DI~sfS~iAr~~l~l~ 383 (429)
|+.++||--+.+.. .-+++.+|+||+=- | .+ ..- ...++ .+=|.| -|-+-..||+.++..+
T Consensus 21 IG~i~NGAGlaMaT--mD~i~~~Gg~pANFlDiGGga~~e~v~~al~iil~d~~Vk~IlINIfGGI~rcD~vA~GIv~A~ 98 (148)
T d1eucb1 21 IACFVNGAGLAMAT--CDIIFLNGGKPANFLDLGGGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKAC 98 (148)
T ss_dssp EEEEESSHHHHHHH--HHHHHHTTCCBSEEEECCSSCCHHHHHHHHHHTTSCTTCCEEEEEEECSSSCHHHHHHHHHHHH
T ss_pred EEEEecCCccchhH--HHHHHHcCCCeeeEEecCCCCCHHHHHHHHHHHHCCCCccEEEEEeeEeehhHHHHHHHHHHHH
Confidence 89999997665544 45899999999842 2 11 111 22343 322222 1235467888777776
Q ss_pred hh
Q 014181 384 QD 385 (429)
Q Consensus 384 ~g 385 (429)
..
T Consensus 99 ~e 100 (148)
T d1eucb1 99 RE 100 (148)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 2
>d2nu7b1 c.23.4.1 (B:239-388) Succinyl-CoA synthetase, beta-chain, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=7.34 E-value=1.2e+02 Score=24.77 Aligned_cols=27 Identities=26% Similarity=0.425 Sum_probs=21.4
Q ss_pred eeeecCCCcccchhhHHHHhhhcCCeeee
Q 014181 321 LSRLVNGEDLHLSTTEKKILNTYNEKPVL 349 (429)
Q Consensus 321 Ip~Vvng~wi~l~~~~r~l~~avn~KPvL 349 (429)
|+.++||--+.+.. .=+++.+|+||+=
T Consensus 21 Ig~i~nGAGlamaT--mD~i~~~Gg~pAN 47 (150)
T d2nu7b1 21 IGCMVNGAGLAMGT--MDIVKLHGGEPAN 47 (150)
T ss_dssp EEEEESSHHHHHHH--HHHHHHTTCCBCE
T ss_pred EEEEEcCCccchhh--HHHHHHCCCCeeE
Confidence 88999997665544 4588999999983
No 3
>d2gw6a1 c.52.2.1 (A:2-123) tRNA-splicing endonuclease subunit Sen15 {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.28 E-value=54 Score=26.39 Aligned_cols=66 Identities=17% Similarity=0.213 Sum_probs=41.3
Q ss_pred ccCCCccccCCCCCccceeeeeEeeeCcccchhhccCCCcccccCCCCCeEEEEEEEcCCCcccccCCCCCCCCeEEEEE
Q 014181 194 YLRDKKKDFAPNFAAYCPFAADVFLSQRKIDHIARFVDLPVIDSSEELPSILVVNLQIPLYPAAIFQGENDGEGMNLVLY 273 (429)
Q Consensus 194 Yl~DKkKvpA~~~~l~~lvgvDlF~s~~kidhIa~~~~lp~~~~~~~~P~vfIVNiqlP~~p~~~F~~~~DGeg~slVlY 273 (429)
||.-|+|.-.+. -++-|+-++.=.+-.++..+-.+..+|. .....|.-|++-|+=+. |-|+|
T Consensus 56 yL~gr~~~~~~~-qv~iP~p~~~sls~~~i~~~~~~~~~p~--~~~~~~~s~tLai~d~D---------------STIvY 117 (122)
T d2gw6a1 56 CLVGTEIEGEGL-QTVVPTPITASLSHNRIREILKASRKLQ--GDPDLPMSFTLAIVESD---------------STIVY 117 (122)
T ss_dssp EEEEESSTTCCC-CEEEEEETTCEEEHHHHHHHHHHHHHHT--TCSSCCCEEEEEEECTT---------------SCEEE
T ss_pred EEEcccccCCCc-cEEEeeccccccCHHHHHHHHHhccCCc--CCcCccceEEEEEEcCC---------------CeEEE
Confidence 666666655555 4788888877777777777754322221 12234556666777666 56788
Q ss_pred EeeC
Q 014181 274 FKLS 277 (429)
Q Consensus 274 F~~~ 277 (429)
|+++
T Consensus 118 Yrmt 121 (122)
T d2gw6a1 118 YKLT 121 (122)
T ss_dssp EEEE
T ss_pred EEcc
Confidence 8875
No 4
>d2fsra1 d.108.1.1 (A:4-167) Probable acetyltranferase Atu2435 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=5.85 E-value=1.1e+02 Score=22.64 Aligned_cols=23 Identities=22% Similarity=0.378 Sum_probs=17.9
Q ss_pred eeEeeecCCCCCCcccccceEEecc
Q 014181 394 FGLTIQENKTENLPENMLCCIRLNE 418 (429)
Q Consensus 394 ~GfvIEG~~eeELPE~lLG~vRl~~ 418 (429)
+||++||..+.+-|+.+ .-|+|+
T Consensus 142 ~GF~~eg~~~~~~~~~~--~yr~~~ 164 (164)
T d2fsra1 142 IGGTLDPLAPRSDPEDL--VYRYHQ 164 (164)
T ss_dssp TTCEECTTSCCSSTTCE--EEEECC
T ss_pred CCCEEeeeEcccCCCce--EEeeCC
Confidence 59999999998888876 456553
No 5
>d1mg7a1 d.14.1.6 (A:14-187) Early switch protein XOL-1, N-terminal domain {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=5.44 E-value=90 Score=26.14 Aligned_cols=70 Identities=21% Similarity=0.196 Sum_probs=41.1
Q ss_pred Chhhhh-hhcceeeeecCCCcccchhhHHHHhhhcCCeeeeecCceeeccCC---CeEEE-EEeccCchHHHHHHHHHhh
Q 014181 310 TINSFR-ERLKILSRLVNGEDLHLSTTEKKILNTYNEKPVLSRPQHEFYLGE---NYFEI-DLDVHRFSYLSRKTFAAFQ 384 (429)
Q Consensus 310 ~~d~fR-~RfKLIp~Vvng~wi~l~~~~r~l~~avn~KPvLir~~~~y~~G~---nYlEi-DvDI~sfS~iAr~~l~l~~ 384 (429)
.+..|| +.+-.-|.||+--.. ..-||| |=|++.-...--+-+ +=-+| +++-+.+.++.+.+++-++
T Consensus 25 ~~~~~~~~~~~~APHvV~i~~~--------g~MAVN-K~C~v~s~il~~r~pks~~eH~Idev~~~~hg~it~~iI~DlL 95 (174)
T d1mg7a1 25 DDPNFRNSKLAAAPHTVHMMDS--------GFLAIN-RQCLVKGKAILAREPKSSNEHMIDDLPKHAHDQHTLSILRDFI 95 (174)
T ss_dssp -------CEEEEEEEEEEETTT--------EEEEEE-EEEEEEEEEEESSCCSSGGGSEECCCCCCTTHHHHHHHHHHHH
T ss_pred CCCCcccchhccCCeEEeeccc--------ceeeee-eeEEEeeeeccccCCCchhhhhHHHhhHhhhcceeHHHHHHHH
Confidence 457899 799999999984443 245777 455543111111112 22478 7888999999999988887
Q ss_pred hccc
Q 014181 385 DRFK 388 (429)
Q Consensus 385 g~~k 388 (429)
+.++
T Consensus 96 e~mE 99 (174)
T d1mg7a1 96 DQLK 99 (174)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 7654
No 6
>d1wika_ c.47.1.1 (A:) Thioredoxin-like protein 2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=4.76 E-value=80 Score=23.91 Aligned_cols=34 Identities=18% Similarity=0.163 Sum_probs=26.3
Q ss_pred HHhhhcCCeeeeec-------Cceeec---------cCCCeEEEEEeccC
Q 014181 338 KILNTYNEKPVLSR-------PQHEFY---------LGENYFEIDLDVHR 371 (429)
Q Consensus 338 ~l~~avn~KPvLir-------~~~~y~---------~G~nYlEiDvDI~s 371 (429)
.|...++..||++- |.|.|- .|-.|-|+|||-+.
T Consensus 7 ~i~~~i~~~~VvvF~Kgt~~~p~Cp~c~~ak~lL~~~~i~~~~~~v~~~~ 56 (109)
T d1wika_ 7 GLKVLTNKASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILEDE 56 (109)
T ss_dssp CHHHHHTTSSEEEEESSTTTCCCSSTHHHHHHHHHHTCSCEEEEESSSCH
T ss_pred HHHHHHhcCCEEEEeCCCCCCCCChHHHHHHHHHHhcCCCceEEEecccH
Confidence 47888899999983 457773 36799999998765
No 7
>d1ex0a1 b.1.18.9 (A:7-190) Transglutaminase N-terminal domain {Human (Homo sapiens), blood isozyme [TaxId: 9606]}
Probab=3.89 E-value=3.9e+02 Score=22.13 Aligned_cols=60 Identities=7% Similarity=0.081 Sum_probs=37.0
Q ss_pred ccceeeeeEeeeCc----ccchhhccCCCcccccCCCCCeEEEEEEEcCCCcccccCCCCCCCCeEEEEEEeeCc
Q 014181 208 AYCPFAADVFLSQR----KIDHIARFVDLPVIDSSEELPSILVVNLQIPLYPAAIFQGENDGEGMNLVLYFKLSE 278 (429)
Q Consensus 208 l~~lvgvDlF~s~~----kidhIa~~~~lp~~~~~~~~P~vfIVNiqlP~~p~~~F~~~~DGeg~slVlYF~~~e 278 (429)
++..+.||+|++.. +.+|--.+ +...+---++-||.+.+.+-=|..|. .-.+.++|.+-+
T Consensus 38 ~l~v~~vdl~~~~~e~N~~~HHTd~y-~~~~LIVRRGQpF~i~L~fnR~~~~~----------~D~l~l~~~~Gp 101 (184)
T d1ex0a1 38 FLNVTSVHLFKERWDTNKVDHHTDKY-ENNKLIVRRGQSFYVQIDFSRPYDPR----------RDLFRVEYVIGR 101 (184)
T ss_dssp SCCEEEEECCCCTTSHHHHHHTCTTS-SCSSEEEETTSEEEEEEEESSCCCTT----------TCCEEEEEECBS
T ss_pred eeEEEEEeeeccCccccchhhCcccc-CCCCEEEeCCCCEEEEEEecCCCCCC----------CCeEEEEEEeCC
Confidence 56889999999953 33333222 22222223567888888887777653 135777777643
No 8
>d1om4a_ d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=3.81 E-value=3.2e+02 Score=25.71 Aligned_cols=34 Identities=18% Similarity=0.450 Sum_probs=28.5
Q ss_pred EeeecCCC----CCCcccccceEEecccccCccccCCC
Q 014181 396 LTIQENKT----ENLPENMLCCIRLNEIDYSNYRQLGV 429 (429)
Q Consensus 396 fvIEG~~e----eELPE~lLG~vRl~~iD~~~a~~~~~ 429 (429)
++||++.+ =|+|+.++-=|-|.|.++.--..|||
T Consensus 224 Lviq~~g~~p~~feiP~elvlEV~i~HP~~~wf~~LgL 261 (418)
T d1om4a_ 224 LLLQANGNDPELFQIPPELVLEVPIRHPKFDWFKDLGL 261 (418)
T ss_dssp EEEECTTCCCEEECCCGGGCCEEECCCSSCTTGGGGCC
T ss_pred EEEEECCCCCeeEeCCHHHeeeecccCCCChhHHhcCC
Confidence 55666554 38999999999999999999888887
No 9
>d3e7ma1 d.174.1.1 (A:77-497) Nitric oxide (NO) synthase oxygenase domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=3.74 E-value=3.1e+02 Score=25.83 Aligned_cols=34 Identities=18% Similarity=0.554 Sum_probs=28.4
Q ss_pred EeeecCCCC----CCcccccceEEecccccCccccCCC
Q 014181 396 LTIQENKTE----NLPENMLCCIRLNEIDYSNYRQLGV 429 (429)
Q Consensus 396 fvIEG~~ee----ELPE~lLG~vRl~~iD~~~a~~~~~ 429 (429)
++||+..++ |+|+.++-=|-|.|.++.--..|||
T Consensus 225 Lv~q~~g~~P~~feiP~elvlEV~i~HP~~~wf~~LgL 262 (421)
T d3e7ma1 225 LVLQADGQDPEVFEIPPDLVLEVTMEHPKYEWFQELGL 262 (421)
T ss_dssp EEEECTTCCCEEECCCGGGCCEEECCCSSCGGGGGGCC
T ss_pred EEEEeCCCCCeeeeCChhHeeEecccCCCChhHHhcCC
Confidence 556665543 8999999999999999999888887
No 10
>d2qqra1 b.34.9.1 (A:897-955) Jumonji domain-containing protein 2A {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.66 E-value=1.7e+02 Score=20.63 Aligned_cols=22 Identities=32% Similarity=0.680 Sum_probs=17.2
Q ss_pred CceeeccC-------CCeEEEEEeccCch
Q 014181 352 PQHEFYLG-------ENYFEIDLDVHRFS 373 (429)
Q Consensus 352 ~~~~y~~G-------~nYlEiDvDI~sfS 373 (429)
....||++ ..|.||..|=+|||
T Consensus 14 kNgryY~c~V~~~~~qtfyeV~FdDgS~s 42 (59)
T d2qqra1 14 KNGRFYQCEVVRLTTETFYEVNFDDGSFS 42 (59)
T ss_dssp TTSSEEEEEEEEEEEEEEEEEEETTSCEE
T ss_pred cCCcEEEEEEEEeeeEEEEEEEecCCCcc
Confidence 35567764 37999999999987
Done!