Query 014185
Match_columns 429
No_of_seqs 247 out of 1436
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 07:00:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014185.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014185hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 1.4E-59 4.8E-64 462.7 30.7 351 50-418 5-399 (413)
2 1tzs_A Cathepsin E; hydrolase, 100.0 4.1E-58 1.4E-62 444.9 28.3 319 54-427 13-351 (351)
3 1j71_A Candidapepsin, aspartic 100.0 2E-58 6.8E-63 444.3 24.4 311 53-428 2-334 (334)
4 2qzx_A Candidapepsin-5; aspart 100.0 6.5E-58 2.2E-62 442.3 26.4 314 53-428 2-341 (342)
5 3psg_A Pepsinogen; hydrolase(a 100.0 4.2E-58 1.4E-62 446.7 24.0 311 54-418 46-370 (370)
6 3fv3_A SAPP1P-secreted asparti 100.0 2.2E-57 7.4E-62 438.3 28.6 312 53-428 2-339 (339)
7 3pvk_A Candidapepsin-2; hydrol 100.0 1.4E-57 4.8E-62 440.3 25.6 311 54-428 3-341 (342)
8 2apr_A Rhizopuspepsin; hydrola 100.0 3.6E-57 1.2E-61 433.7 26.3 299 64-418 13-324 (325)
9 1mpp_A Pepsin; hydrolase(acid 100.0 8.4E-57 2.9E-61 437.7 27.4 326 51-424 5-361 (361)
10 2x0b_A Renin; hydrolase-hormon 100.0 1.1E-57 3.7E-62 444.6 20.2 310 53-418 50-383 (383)
11 1am5_A Pepsin, acid proteinase 100.0 1.2E-56 4E-61 430.2 26.6 308 54-418 2-324 (324)
12 1dpj_A Proteinase A; proteinas 100.0 1.4E-56 4.6E-61 430.7 25.0 310 55-418 4-329 (329)
13 3aup_A SBG7S, BG, basic 7S glo 100.0 1.1E-55 3.8E-60 435.5 30.0 347 52-424 8-399 (403)
14 4aa9_A Chymosin; hydrolase, as 100.0 5.9E-57 2E-61 431.8 19.7 306 57-418 4-320 (320)
15 3c9x_A Trichoderma reesei aspa 100.0 2.1E-56 7.1E-61 429.1 23.2 303 64-417 13-329 (329)
16 3cms_A Chymosin B; hydrolase, 100.0 2.3E-56 7.8E-61 427.9 21.9 306 55-418 5-323 (323)
17 1htr_B Gastricsin; aspartyl pr 100.0 2.1E-56 7.1E-61 429.4 21.0 306 56-418 5-329 (329)
18 1oew_A Endothiapepsin; hydrola 100.0 4.1E-56 1.4E-60 427.1 21.8 302 64-417 13-329 (329)
19 3k1w_A Renin; protease, altern 100.0 6E-56 2.1E-60 428.7 22.0 312 51-418 5-340 (341)
20 1t6e_X Xylanase inhibitor; two 100.0 8.3E-55 2.8E-59 426.1 27.6 342 53-419 2-374 (381)
21 1miq_A Plasmepsin; aspartic pr 100.0 2E-55 7E-60 428.6 22.9 305 54-418 52-374 (375)
22 1ibq_A Aspergillopepsin; aspar 100.0 6.6E-55 2.3E-59 418.0 22.8 300 64-418 12-325 (325)
23 1izd_A Aspartic proteinase; su 100.0 4.8E-55 1.6E-59 418.4 20.4 298 65-418 14-323 (323)
24 2bju_A Plasmepsin II; aspartic 100.0 7.2E-55 2.5E-59 431.3 21.5 308 55-419 129-451 (453)
25 1qdm_A Prophytepsin; aspartic 100.0 1.3E-54 4.6E-59 433.9 23.6 328 53-418 41-478 (478)
26 3qvc_A Histo-aspartic protease 100.0 8.8E-55 3E-59 431.3 20.8 304 54-418 127-449 (451)
27 3vf3_A Beta-secretase 1; struc 100.0 1.4E-53 4.7E-58 420.9 29.3 317 65-425 27-381 (402)
28 3lpj_A Beta-secretase 1; alzhe 100.0 1.1E-53 3.9E-58 427.4 28.7 317 65-425 73-427 (455)
29 1yg9_A Aspartic protease BLA G 100.0 7E-55 2.4E-59 418.5 18.9 306 55-418 8-329 (330)
30 2ewy_A Beta-secretase 2; BACE2 100.0 1.6E-53 5.4E-58 418.0 28.9 312 65-421 12-358 (383)
31 1bxo_A Protein (penicillopepsi 100.0 9.5E-55 3.3E-59 416.5 18.3 297 65-418 14-323 (323)
32 2qp8_A Beta-secretase 1; BACE1 100.0 2.4E-53 8.3E-58 418.1 28.2 315 65-424 20-373 (395)
33 1wkr_A Polyporopepsin; hydrola 100.0 2.6E-52 8.8E-57 402.8 25.1 303 55-423 4-338 (340)
34 1b5f_A Protein (cardosin A); h 100.0 1.1E-42 3.7E-47 318.2 18.1 221 55-309 4-238 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 8.1E-38 2.8E-42 286.8 17.5 223 171-418 1-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 1.5E-21 5.3E-26 150.9 8.8 87 55-166 4-94 (97)
37 1b5f_B Protein (cardosin A); h 99.6 1E-15 3.5E-20 116.1 5.7 73 342-418 12-87 (87)
38 3s8i_A Protein DDI1 homolog 1; 93.3 0.099 3.4E-06 42.7 5.0 29 389-417 107-135 (148)
39 2hs1_A HIV-1 protease; ultra-h 87.6 0.57 2E-05 35.1 4.0 26 69-96 10-35 (99)
40 1fmb_A EIAV protease; hydrolas 87.6 0.55 1.9E-05 35.6 4.0 25 69-95 10-34 (104)
41 2i1a_A DNA damage-inducible pr 85.4 0.72 2.5E-05 37.4 3.9 30 65-96 24-53 (148)
42 3ec0_A Protease; HIV-2, inhibi 85.2 0.86 2.9E-05 34.1 3.9 26 69-96 10-35 (99)
43 3liy_A Protease; hydrolase, hy 80.3 1.6 5.6E-05 33.3 3.7 29 69-97 12-43 (116)
44 2hah_A Protease, retropepsin; 79.7 1.7 5.8E-05 33.6 3.8 26 69-97 16-41 (116)
45 3s8i_A Protein DDI1 homolog 1; 78.7 1.6 5.6E-05 35.3 3.7 30 66-97 23-52 (148)
46 3sqf_A Protease; folded monome 77.6 2.3 7.8E-05 32.6 3.9 27 69-97 11-37 (114)
47 2i1a_A DNA damage-inducible pr 72.2 4 0.00014 32.8 4.4 27 390-416 109-135 (148)
48 3slz_A GAG-Pro-POL polyprotein 71.4 3.8 0.00013 32.4 3.9 28 67-96 22-49 (132)
49 3ka2_A [L-Ala51;Gly51']HIV-1 p 66.1 5.2 0.00018 34.1 3.9 27 68-96 9-35 (203)
50 2rsp_A RSV protease; hydrolase 61.5 6.4 0.00022 30.7 3.3 23 73-97 26-48 (124)
51 3ka2_A [L-Ala51;Gly51']HIV-1 p 43.1 21 0.00073 30.3 3.9 27 68-96 113-139 (203)
52 1b5f_A Protein (cardosin A); h 30.4 56 0.0019 28.2 4.8 30 67-96 189-226 (239)
53 1bxo_A Protein (penicillopepsi 30.2 53 0.0018 29.8 4.8 42 246-299 4-45 (323)
54 1ibq_A Aspergillopepsin; aspar 28.5 56 0.0019 29.8 4.6 31 261-299 14-44 (325)
55 1fmb_A EIAV protease; hydrolas 28.3 38 0.0013 25.3 2.8 34 262-300 5-38 (104)
56 1izd_A Aspartic proteinase; su 28.1 61 0.0021 29.5 4.8 42 246-299 4-45 (323)
57 3q48_A Chaperone CUPB2; IG fol 27.3 38 0.0013 29.9 3.1 14 261-274 181-194 (257)
58 2hs1_A HIV-1 protease; ultra-h 26.5 40 0.0014 25.0 2.5 31 262-297 5-35 (99)
59 1mpp_A Pepsin; hydrolase(acid 25.9 75 0.0026 29.3 5.1 46 245-298 4-49 (361)
60 3cms_A Chymosin B; hydrolase, 24.8 80 0.0027 28.6 4.9 44 247-298 2-45 (323)
61 3slz_A GAG-Pro-POL polyprotein 24.4 59 0.002 25.5 3.3 28 265-297 22-49 (132)
62 2hah_A Protease, retropepsin; 22.4 55 0.0019 25.0 2.7 31 261-297 10-40 (116)
63 1wkr_A Polyporopepsin; hydrola 22.1 85 0.0029 28.7 4.6 44 53-97 174-223 (340)
64 1lya_B Cathepsin D; lysosomal 22.0 78 0.0027 27.2 4.1 31 67-97 100-137 (241)
65 3aup_A SBG7S, BG, basic 7S glo 21.1 94 0.0032 29.2 4.8 42 52-97 216-276 (403)
66 1oew_A Endothiapepsin; hydrola 20.7 1.6E+02 0.0055 26.6 6.2 41 54-97 183-229 (329)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=1.4e-59 Score=462.71 Aligned_cols=351 Identities=18% Similarity=0.339 Sum_probs=278.3
Q ss_pred CCceeEEeeccCCCCCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCCCCCCCCCCCCcCCCCccCCCcccccCCC
Q 014185 50 AASSVFLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALH 129 (429)
Q Consensus 50 ~~~~~~~p~~~~~~~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~~C~~~~~~~y~~~~S~~~C~~~~C~~~~ 129 (429)
+++.+.+|+.++. .+++|+++|.||||||++.|+|||||+++||+|. +| . ....|. .++|.++.|...+
T Consensus 5 ~~~~~~~pv~~d~-~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~-~c---~--~Sst~~----~v~C~s~~C~~~~ 73 (413)
T 3vla_A 5 RPSALVVPVKKDA-STLQYVTTINQRTPLVSENLVVDLGGRFLWVDCD-QN---Y--VSSTYR----PVRCRTSQCSLSG 73 (413)
T ss_dssp CCSEEEEEEEECT-TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS-SS---C--CCTTCE----ECBTTSHHHHHTT
T ss_pred CCccEEEEeeecC-CCCeEEEEEEcCCCCcceEEEEeCCChhhhcccC-CC---C--CCCCcC----ccCCCcccccccc
Confidence 4678899999875 6899999999999999999999999999999987 55 2 111222 4899999998765
Q ss_pred CCCC--------CCCCCCCCCCeeEeEeC-CCCeEEEEEEEEEEEEeecCCc-----ccccceEEeeeeecCCCCCCCCC
Q 014185 130 WPNP--------PRCKHPNDQCDYEIEYG-DGGSSIGALVTDLFPLRFSNGS-----VFNVPLTFGCGYNQHNPGPLSPP 195 (429)
Q Consensus 130 ~~~t--------~~~~~~~~~~~~~~~Y~-~gs~~~G~~~~D~v~l~~~~g~-----~~~~~~~fg~~~~~~~~~~~~~~ 195 (429)
.+.. ..|. ++.|.|.+.|+ +++.+.|.+++|+|+|+..+|. +.++++.|||++.......+ .
T Consensus 74 ~~~~~~c~s~~~~~c~--~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~--~ 149 (413)
T 3vla_A 74 SIACGDCFNGPRPGCN--NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLA--S 149 (413)
T ss_dssp CCEEECCSSCCBTTBC--SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSC--T
T ss_pred cCCCcccccCCCCCCC--CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcc--c
Confidence 3311 1233 25799999994 7778999999999999654443 57789999999985211112 5
Q ss_pred CCceEEecCCCCCcHHHHHhhcCCccceEEEEeCC--CCceeEEeCCCC-------CCCCC-cEEeecccCCCC------
Q 014185 196 DTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQ--NGRGVLFLGDGK-------VPSSG-VAWTPMLQNSAD------ 259 (429)
Q Consensus 196 ~~~GIlGLg~~~~s~~~~l~~~g~i~~~Fsl~l~~--~~~G~l~~Gd~~-------~~~g~-l~~~p~~~~~~~------ 259 (429)
..+||||||++..|++.||.+++.++++||+||.+ +..|.|+||+.. ++.++ ++|+|+...+..
T Consensus 150 ~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~ 229 (413)
T 3vla_A 150 GVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATST 229 (413)
T ss_dssp TCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCC
T ss_pred ccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCcccccccc
Confidence 78999999999999999999998889999999986 467999999432 25678 999999976421
Q ss_pred ----CCCEEeeecEEEECCEEeccC----------CCcEEEecCCcceeecHHHHHHHHHHHHHHhcCCCCccCCCCCCC
Q 014185 260 ----LKHYILGPAELLYSGKSCGLK----------DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTL 325 (429)
Q Consensus 260 ----~~~w~v~l~~i~v~~~~~~~~----------~~~aiiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~ 325 (429)
..+|.|.+++|+||++.+..+ ...+||||||++++||+++|++|.++|.+.+....+.+.+....+
T Consensus 230 ~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~ 309 (413)
T 3vla_A 230 QGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPF 309 (413)
T ss_dssp TTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTC
T ss_pred ccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCC
Confidence 269999999999999988754 368999999999999999999999999987641112233233446
Q ss_pred CceecCCCcCcccccccCccEEEEEeCCCCceEEEeCCCeEEEEeCCCcEEEEEEcCCCCCCCCceeEcccceeceEEEE
Q 014185 326 PICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIY 405 (429)
Q Consensus 326 ~~C~~~~~~~~~~~~~~~P~i~~~f~~~~~g~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~~ilG~~fl~~~y~vf 405 (429)
..||+.+.......+..+|+|+|+|+++ ++.++|++++|+++..++.+|++++..... ....||||+.|||++|+||
T Consensus 310 ~~C~~~~~~~~~~~~~~lP~i~f~f~g~--~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~-~~~~~IlGd~fl~~~~vvf 386 (413)
T 3vla_A 310 GACFSTDNILSTRLGPSVPSIDLVLQSE--SVVWTITGSNSMVYINDNVVCLGVVDGGSN-LRTSIVIGGHQLEDNLVQF 386 (413)
T ss_dssp SCEEECTTCCEETTEECCCCEEEECSST--TCEEEECHHHHEEEEETTEEEECEEEEESS-CSSSEEECHHHHTTEEEEE
T ss_pred cceeccCCccccccccCCCcEEEEEcCC--cEEEEeCccceEEEeCCCcEEEEEEecCCC-cccceeEehhhhcCeEEEE
Confidence 6799875433223345799999999984 489999999999987667889988765421 2358999999999999999
Q ss_pred eCCCCEEEEecCC
Q 014185 406 DNEKQRIGWKPED 418 (429)
Q Consensus 406 D~~~~~iGfa~~~ 418 (429)
|++++|||||++.
T Consensus 387 D~~~~riGfa~~~ 399 (413)
T 3vla_A 387 DLATSRVGFSGTL 399 (413)
T ss_dssp ETTTTEEEEEEEG
T ss_pred ECCCCEEEEEEec
Confidence 9999999999864
No 2
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.1e-58 Score=444.85 Aligned_cols=319 Identities=19% Similarity=0.346 Sum_probs=253.2
Q ss_pred eEEeeccCCCCCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCC--CCCCCCCCCCcCCCCccCCCcccccCCCCC
Q 014185 54 VFLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT--GCTKPPEKQYKPHKNIVPCSNPRCAALHWP 131 (429)
Q Consensus 54 ~~~p~~~~~~~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~--~C~~~~~~~y~~~~S~~~C~~~~C~~~~~~ 131 (429)
..+|+.. +.+..|+++|.||||+|++.|+|||||+++||+|. +|. .|. .++.|+|++|
T Consensus 13 ~~~~l~n--~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~--~~~~y~~~~S--------------- 72 (351)
T 1tzs_A 13 AKEPLIN--YLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSV-YCTSPACK--THSRFQPSQS--------------- 72 (351)
T ss_dssp -CCTTGG--GSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSGGGT--TSCCBCGGGC---------------
T ss_pred cceecee--cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC-CCCccccC--CCCcCCcccC---------------
Confidence 3466663 45778999999999999999999999999999998 897 565 7899999998
Q ss_pred CCCCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCcccccceEEeeeeecCCCCCCCCCCCceEEecCCCC----
Q 014185 132 NPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR---- 207 (429)
Q Consensus 132 ~t~~~~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~---- 207 (429)
+|++. .+|.|.+.|++| ++.|.+++|+|+| ++..++++.|||++...+. .+.....+||||||++.
T Consensus 73 sT~~~----~~~~~~i~Yg~G-s~~G~~~~D~v~i----g~~~~~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~ 142 (351)
T 1tzs_A 73 STYSQ----PGQSFSIQYGTG-SLSGIIGADQVSV----EGLTVVGQQFGESVTEPGQ-TFVDAEFDGILGLGYPSLAVG 142 (351)
T ss_dssp TTCBC----CSCEEEEESSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEECSCCCG-GGGGCSCSEEEECSCGGGSGG
T ss_pred cceEE----CCCEEEEEeCCC-CeEEEEEEeEEEE----CCeEECCeEEEEEEecccc-ccccCCCceEEecCCcccccc
Confidence 46654 678999999999 6999999999999 8889999999999876322 12235689999999965
Q ss_pred --CcHHHHHhhcCCc-cceEEEEeCCCC----ceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEEECCEEec
Q 014185 208 --ISIVSQLREYGLI-RNVIGHCIGQNG----RGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCG 278 (429)
Q Consensus 208 --~s~~~~l~~~g~i-~~~Fsl~l~~~~----~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~ 278 (429)
.+++++|++||+| +++||+||.+.. .|.|+|| |.+++.|+++|+|+... .+|.|.+++|+|+++.+.
T Consensus 143 ~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~ 218 (351)
T 1tzs_A 143 GVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQ----AYWQIALDNIQVGGTVMF 218 (351)
T ss_dssp GCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSEE----TTEEEEEEEEEETTEEEE
T ss_pred CCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCCC----ceEEEEeCEEEECCceEE
Confidence 3589999999999 999999998642 7999999 67789999999999875 799999999999998753
Q ss_pred -cCCCcEEEecCCcceeecHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceecCCCcCcccccccCccEEEEEeCCCCce
Q 014185 279 -LKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSV 357 (429)
Q Consensus 279 -~~~~~aiiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~~~f~~~~~g~ 357 (429)
..+..+||||||++++||++++++|.+++++... .......|+. ...+|+|+|+|++ .
T Consensus 219 ~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~--------~g~~~~~C~~---------~~~~P~i~f~f~g----~ 277 (351)
T 1tzs_A 219 CSEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAPV--------DGEYAVECAN---------LNVMPDVTFTING----V 277 (351)
T ss_dssp CTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC--------SSSEEECGGG---------GGGSCCEEEEETT----E
T ss_pred cCCCceEEeccCCcceeCCHHHHHHHHHHhCCccc--------CCeEEEeCCC---------CccCCcEEEEECC----E
Confidence 3457899999999999999999999999865321 1111113543 1358999999965 8
Q ss_pred EEEeCCCeEEEEeCC--CcEEEEEEcCCCC--CCCCceeEcccceeceEEEEeCCCCEEEEecCCCCCccccCc
Q 014185 358 RLVVPPEAYLVISGR--KNVCLGILNGSEA--EVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSLNH 427 (429)
Q Consensus 358 ~~~l~~~~y~~~~~~--~~~C~~~~~~~~~--~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~c~~~~~~~~ 427 (429)
+++|++++|+++... +..|+..+...+. +..+.||||++|||++|+|||++++|||||+++|+...+|++
T Consensus 278 ~~~i~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~s~~~~~~ 351 (351)
T 1tzs_A 278 PYTLSPTAYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPWSHPQFEK 351 (351)
T ss_dssp EEEECTTTSEECC-----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC---------
T ss_pred EEEECHHHhEeeccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCcccchhhcC
Confidence 999999999986542 3579854432211 134689999999999999999999999999999999888874
No 3
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=2e-58 Score=444.27 Aligned_cols=311 Identities=18% Similarity=0.328 Sum_probs=259.8
Q ss_pred eeEEeeccCCCCCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCC-CCCCC-------CCCCCCCCcCCCCccCCCccc
Q 014185 53 SVFLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDA-PCTGC-------TKPPEKQYKPHKNIVPCSNPR 124 (429)
Q Consensus 53 ~~~~p~~~~~~~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~-~c~~C-------~~~~~~~y~~~~S~~~C~~~~ 124 (429)
.+.+|+... +..|+++|.||||+|++.|+|||||+++||+|.. +|..| .+..++.|+|++|
T Consensus 2 ~~~~~l~~~---~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~S-------- 70 (334)
T 1j71_A 2 DVPTTLINE---GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSS-------- 70 (334)
T ss_dssp CEEEEEEEC---SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGC--------
T ss_pred ceeEEEecC---CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccC--------
Confidence 456788743 5689999999999999999999999999998541 35432 1236789999888
Q ss_pred ccCCCCCCCCCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCcccccceEEeeeeecCCCCCCCCCCCceEEecC
Q 014185 125 CAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLG 204 (429)
Q Consensus 125 C~~~~~~~t~~~~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg 204 (429)
+|++. ..|.|.+.|++|+.+.|.+++|+|+| ++..++++.|||++.. ...+||||||
T Consensus 71 -------sT~~~----~~~~~~i~Yg~Gs~~~G~~~~D~v~~----g~~~~~~~~fg~~~~~--------~~~~GilGLg 127 (334)
T 1j71_A 71 -------SSAQN----LNQDFSIEYGDLTSSQGSFYKDTVGF----GGISIKNQQFADVTTT--------SVDQGIMGIG 127 (334)
T ss_dssp -------TTCEE----EEEEEEEEBTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEE--------SSSSCEEECS
T ss_pred -------CCccc----CCCceEEEECCCCEEEEEEEEEEEEE----CCEEEccEEEEEEEec--------CCCccEEEEc
Confidence 36553 57899999999977899999999999 8888999999999986 3589999999
Q ss_pred CCCC--------cHHHHHhhcCCc-cceEEEEeCC--CCceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEE
Q 014185 205 RGRI--------SIVSQLREYGLI-RNVIGHCIGQ--NGRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELL 271 (429)
Q Consensus 205 ~~~~--------s~~~~l~~~g~i-~~~Fsl~l~~--~~~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~ 271 (429)
++.. +++++|++||+| +++||+||.+ ...|.|+|| |++++.|+++|+|+... .+|.|.+++|+
T Consensus 128 ~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~ 203 (334)
T 1j71_A 128 FTADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSS----VELRVHLGSIN 203 (334)
T ss_dssp CGGGSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCCS----SSCEEEEEEEE
T ss_pred CCcccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccCC----CeEEEEEeEEE
Confidence 9653 899999999999 9999999985 468999999 77888999999999876 69999999999
Q ss_pred ECCEEeccCCCcEEEecCCcceeecHHHHHHHHHHHHHHhcCCCCccCCCCCCC-CceecCCCcCcccccccCccEEEEE
Q 014185 272 YSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTL-PICWRGPFKALGQVTEYFKPLALSF 350 (429)
Q Consensus 272 v~~~~~~~~~~~aiiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~-~~C~~~~~~~~~~~~~~~P~i~~~f 350 (429)
++++.+.. +..++|||||++++||++++++|.+++++... .. ..... ..|+. +|.|+|+|
T Consensus 204 v~g~~~~~-~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~-----~~-~~~~~~~~C~~------------~p~i~f~f 264 (334)
T 1j71_A 204 FDGTSVST-NADVVLDSGTTITYFSQSTADKFARIVGATWD-----SR-NEIYRLPSCDL------------SGDAVFNF 264 (334)
T ss_dssp ETTEEEEE-EEEEEECTTCSSEEECHHHHHHHHHHHTCEEE-----TT-TTEEECSSSCC------------CSEEEEEE
T ss_pred ECCEeccC-CccEEEeCCCCcEecCHHHHHHHHHHcCCccc-----CC-CceEEEEcCCC------------CCceEEEE
Confidence 99998764 46899999999999999999999999976542 00 10111 23432 68999999
Q ss_pred eCCCCceEEEeCCCeEEEEeCCCcEEEEEEcCCCCCCCCceeEcccceeceEEEEeCCCCEEEEecCCCCCccccCcc
Q 014185 351 TNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSLNHF 428 (429)
Q Consensus 351 ~~~~~g~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~c~~~~~~~~~ 428 (429)
.+ |.+++|++++|+++..++..|++.+... +.||||++|||++|+|||++++|||||+++|++.++|+++
T Consensus 265 ~~---g~~~~i~~~~y~~~~~~~~~C~~~i~~~-----~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~~i~~i 334 (334)
T 1j71_A 265 DQ---GVKITVPLSELILKDSDSSICYFGISRN-----DANILGDNFLRRAYIVYDLDDKTISLAQVKYTSSSDISAL 334 (334)
T ss_dssp ST---TCEEEEEGGGGEEECSSSSCEEESEEEC-----TTCEECHHHHTTEEEEEETTTTEEEEEEECCCSCCCEEEC
T ss_pred cC---CcEEEECHHHheeecCCCCeeEEEEeEC-----CCcEEChHhhccEEEEEECCCCEEEEEecCCCCccceEEC
Confidence 76 5999999999999865555698766543 3699999999999999999999999999999999998764
No 4
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=6.5e-58 Score=442.25 Aligned_cols=314 Identities=20% Similarity=0.348 Sum_probs=259.4
Q ss_pred eeEEeeccCCCCCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCC-CCCCC-------CCCCCCCCcCCCCccCCCccc
Q 014185 53 SVFLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDA-PCTGC-------TKPPEKQYKPHKNIVPCSNPR 124 (429)
Q Consensus 53 ~~~~p~~~~~~~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~-~c~~C-------~~~~~~~y~~~~S~~~C~~~~ 124 (429)
.+.+|+.. .+..|+++|+||||+|++.|+|||||+++||+|.. +|..| .+..++.|+|++|
T Consensus 2 ~v~~~l~~---~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~S-------- 70 (342)
T 2qzx_A 2 PVAVTLHN---EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASS-------- 70 (342)
T ss_dssp CEEEEEEE---CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGC--------
T ss_pred ceeEEEec---CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccC--------
Confidence 35667764 25689999999999999999999999999998541 35432 1236789999988
Q ss_pred ccCCCCCCCCCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCcccccceEEeeeeecCCCCCCCCCCCceEEecC
Q 014185 125 CAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLG 204 (429)
Q Consensus 125 C~~~~~~~t~~~~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg 204 (429)
+|++. ..|.|.+.|++|+.+.|.+++|+|+| ++..++++.|||++.. ...+||||||
T Consensus 71 -------sT~~~----~~~~~~i~Yg~Gs~~~G~~~~D~v~~----g~~~v~~~~fg~~~~~--------~~~~GilGLg 127 (342)
T 2qzx_A 71 -------RTSQN----LNTRFDIKYGDGSYAKGKLYKDTVGI----GGVSVRDQLFANVWST--------SARKGILGIG 127 (342)
T ss_dssp -------TTCEE----EEEEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEE--------CSSSCEEECS
T ss_pred -------CCccc----CCCcEEEEeCCCCeEEEEEEEEEEEE----CCEEecceEEEEEEec--------CCCcCEEEEc
Confidence 36553 57899999999977899999999999 8888999999999986 3589999999
Q ss_pred CCCC--------cHHHHHhhcCCc-cceEEEEeCC--CCceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEE
Q 014185 205 RGRI--------SIVSQLREYGLI-RNVIGHCIGQ--NGRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELL 271 (429)
Q Consensus 205 ~~~~--------s~~~~l~~~g~i-~~~Fsl~l~~--~~~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~ 271 (429)
++.. +++++|++||+| +++||+||.+ ...|.|+|| |++++.|+++|+|+... .+|.|.+++|+
T Consensus 128 ~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~ 203 (342)
T 2qzx_A 128 FQSGEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITSE----KKLTVGLRSVN 203 (342)
T ss_dssp CGGGCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS----SSCEEEEEEEE
T ss_pred cccccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccCC----ceEEEEEeEEE
Confidence 9653 899999999999 8999999985 468999999 77889999999999876 69999999999
Q ss_pred ECCEEeccCCCcEEEecCCcceeecHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceecCCCcCcccccccCccEEEEEe
Q 014185 272 YSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFT 351 (429)
Q Consensus 272 v~~~~~~~~~~~aiiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~~~f~ 351 (429)
|+++.+.. +..++|||||++++||++++++|.+++++.... .. . ....|..+|. .+|+|+|+|+
T Consensus 204 v~g~~~~~-~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~---~~--~---~~~~~~~~C~-------~~p~i~f~f~ 267 (342)
T 2qzx_A 204 VRGRNVDA-NTNVLLDSGTTISYFTRSIVRNILYAIGAQMKF---DS--A---GNKVYVADCK-------TSGTIDFQFG 267 (342)
T ss_dssp ETTEEEEE-EEEEEECTTCSSEEECHHHHHHHHHHHTCEEEE---CT--T---SCEEEEECTT-------CCCEEEEEET
T ss_pred ECCEecCC-CcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeee---cc--C---CCcEEEEECC-------CCCcEEEEEC
Confidence 99998765 468999999999999999999999999765420 00 0 0112222332 1689999997
Q ss_pred CCCCceEEEeCCCeEEEEe-----CCCcEEEEEEcCCCCCCCCceeEcccceeceEEEEeCCCCEEEEecCCCCCccccC
Q 014185 352 NRRNSVRLVVPPEAYLVIS-----GRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSLN 426 (429)
Q Consensus 352 ~~~~g~~~~l~~~~y~~~~-----~~~~~C~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~c~~~~~~~ 426 (429)
+ |.+++|++++|+++. .++..|++.+... +.||||++|||++|+|||++++|||||+++|++.++|+
T Consensus 268 ~---g~~~~i~~~~~~~~~~~~~~~~~~~C~~~i~~~-----~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~~i~ 339 (342)
T 2qzx_A 268 N---NLKISVPVSEFLFQTYYTSGKPFPKCEVRIRES-----EDNILGDNFLRSAYVVYNLDDKKISMAPVKYTSESDIV 339 (342)
T ss_dssp T---TEEEEEEGGGGEECCBCTTSCBCSSEEESEEEC-----SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCCEE
T ss_pred C---CcEEEEcHHHhcccccccCCCCCCccEEEEecC-----CCcEeChHhhhcEEEEEECCCCEEEEEeeCCCCCCCeE
Confidence 6 599999999999863 2235798766543 36999999999999999999999999999999999988
Q ss_pred cc
Q 014185 427 HF 428 (429)
Q Consensus 427 ~~ 428 (429)
++
T Consensus 340 ~i 341 (342)
T 2qzx_A 340 AI 341 (342)
T ss_dssp EC
T ss_pred Ec
Confidence 75
No 5
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=4.2e-58 Score=446.75 Aligned_cols=311 Identities=20% Similarity=0.347 Sum_probs=256.3
Q ss_pred eEEeeccCCCCCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCCCCCCCCCCCCcCCCCccCCCcccccCCCCCCC
Q 014185 54 VFLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNP 133 (429)
Q Consensus 54 ~~~p~~~~~~~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~~C~~~~~~~y~~~~S~~~C~~~~C~~~~~~~t 133 (429)
...|+. .+.+.+|+++|+||||||++.|+|||||+++||+|. .|..|.+..++.|+|++| +|
T Consensus 46 ~~~~l~--n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~-~C~~~~C~~~~~y~~~~S---------------sT 107 (370)
T 3psg_A 46 GDEPLE--NYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSV-YCSSLACSDHNQFNPDDS---------------ST 107 (370)
T ss_dssp CCCTTG--GGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSGGGTTSCCBCGGGC---------------TT
T ss_pred ceecce--eccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECC-CCCCcccCCCCCCCCccC---------------cC
Confidence 345665 456789999999999999999999999999999998 898766668999999999 46
Q ss_pred CCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCcccccceEEeeeeecCCCCCCCCCCCceEEecCCCC------
Q 014185 134 PRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR------ 207 (429)
Q Consensus 134 ~~~~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~------ 207 (429)
++. .+|.|.+.|++| ++.|.+++|+|+| ++..++++.|||++..... .+.....+||||||++.
T Consensus 108 ~~~----~~~~~~i~Yg~G-s~~G~~~~Dtv~i----g~~~v~~~~Fg~a~~~~~~-~~~~~~~dGIlGLg~~~~s~~~~ 177 (370)
T 3psg_A 108 FEA----TSQELSITYGTG-SMTGILGYDTVQV----GGISDTNQIFGLSETEPGS-FLYYAPFDGILGLAYPSISASGA 177 (370)
T ss_dssp CEE----EEEEEEEESSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEECSCCCG-GGGGCSCSEEEECSCGGGCGGGC
T ss_pred cEE----CCcEEEEEeCCc-eEEEEEEEEEEee----CCcccCCeEEEEEEeeccc-ccccCCccceeccCCccccccCC
Confidence 664 578999999999 6999999999999 8999999999999876332 12235689999999965
Q ss_pred CcHHHHHhhcCCc-cceEEEEeCCC--CceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEEECCEEecc-CC
Q 014185 208 ISIVSQLREYGLI-RNVIGHCIGQN--GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGL-KD 281 (429)
Q Consensus 208 ~s~~~~l~~~g~i-~~~Fsl~l~~~--~~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~-~~ 281 (429)
.+++++|++||+| +++||+||.+. .+|.|+|| |++++.|+++|+|+... .+|.|.+++|+++++.+.. .+
T Consensus 178 ~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~~----~~w~v~l~~i~v~g~~~~~~~~ 253 (370)
T 3psg_A 178 TPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVE----GYWQITLDSITMDGETIACSGG 253 (370)
T ss_dssp CCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEE----TTEEEEECEEESSSSEEECTTC
T ss_pred CCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeeccccc----ceeEEEEeEEEECCEEEecCCC
Confidence 4689999999999 99999999864 58999999 78899999999999976 7999999999999987754 46
Q ss_pred CcEEEecCCcceeecHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceecCCCcCcccccccCccEEEEEeCCCCceEEEe
Q 014185 282 LTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVV 361 (429)
Q Consensus 282 ~~aiiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~~~f~~~~~g~~~~l 361 (429)
..+++||||+++++|++++++|.+++++... .. -+|..+|... ..+|+|+|+|++ .+++|
T Consensus 254 ~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~--------~~----g~~~v~C~~~----~~lP~i~f~~~g----~~~~l 313 (370)
T 3psg_A 254 CQAIVDTGTSLLTGPTSAIANIQSDIGASEN--------SD----GEMVISCSSI----DSLPDIVFTIDG----VQYPL 313 (370)
T ss_dssp EEEEECTTCCSEEEEHHHHHHHHHHTTCEEC--------TT----CCEECCGGGG----GGCCCEEEEETT----EEEEE
T ss_pred ceEEEcCCCCcEECCHHHHHHHHHHhCCccc--------CC----CcEEEECCCc----ccCCcEEEEECC----EEEEE
Confidence 7899999999999999999999999865421 01 1233333322 358999999976 89999
Q ss_pred CCCeEEEEeCCCcEEEEEEcCCCC--CCCCceeEcccceeceEEEEeCCCCEEEEecCC
Q 014185 362 PPEAYLVISGRKNVCLGILNGSEA--EVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 418 (429)
Q Consensus 362 ~~~~y~~~~~~~~~C~~~~~~~~~--~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~ 418 (429)
++++|+.+ .+..|+..+...+. ..+..||||++|||++|+|||++++|||||+++
T Consensus 314 ~~~~yi~~--~~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 314 SPSAYILQ--DDDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp CHHHHEEE--CSSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CHHHhccc--CCCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 99999998 33459865543221 123469999999999999999999999999974
No 6
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=2.2e-57 Score=438.31 Aligned_cols=312 Identities=20% Similarity=0.320 Sum_probs=259.7
Q ss_pred eeEEeeccCCCCCceEEEEEEeCCCCcEEEEEEecCCCceeee-----CCCCCCCCCCCCCCCCcCCCCccCCCcccccC
Q 014185 53 SVFLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQ-----CDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAA 127 (429)
Q Consensus 53 ~~~~p~~~~~~~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~-----~~~~c~~C~~~~~~~y~~~~S~~~C~~~~C~~ 127 (429)
.+.+|+... +..|+++|.||||||++.|+|||||+++||+ |. +|..|. .++.|+|++|
T Consensus 2 ~i~~~l~~~---~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~-~~~~C~--~~~~y~~~~S----------- 64 (339)
T 3fv3_A 2 SISLSLINE---GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCG-KGVDCK--SSGTFTPSSS----------- 64 (339)
T ss_dssp CEEEEEEEC---SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEEC-TTCCTT--TTCCBCGGGC-----------
T ss_pred ceeeEEEcC---CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCC-CCCCCC--CCCcCCCccC-----------
Confidence 467788744 4589999999999999999999999999998 55 556676 6889999998
Q ss_pred CCCCCCCCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCcccccceEEeeeeecCCCCCCCCCCCceEEecCCCC
Q 014185 128 LHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR 207 (429)
Q Consensus 128 ~~~~~t~~~~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~ 207 (429)
+|++. ..|.|.+.|++|+.+.|.+++|+|+| ++..++++.|||++.. ...+||||||++.
T Consensus 65 ----sT~~~----~~~~~~i~Yg~gs~~~G~~~~D~v~~----g~~~v~~~~fg~~~~~--------~~~~GilGLg~~~ 124 (339)
T 3fv3_A 65 ----SSYKN----LGAAFTIRYGDGSTSQGTWGKDTVTI----NGVSITGQQIADVTQT--------SVDQGILGIGYTS 124 (339)
T ss_dssp ----TTCEE----EEEEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEE--------SSSSCEEECSCGG
T ss_pred ----cceee----CCceEEEEECCCceEEEEEEEEEEEE----CCEEECceEEEEEEec--------CCCceeEEecCcc
Confidence 46664 57899999999999999999999999 8999999999999987 3479999999965
Q ss_pred C----------------cHHHHHhhcCCc-cceEEEEeCCC--CceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEee
Q 014185 208 I----------------SIVSQLREYGLI-RNVIGHCIGQN--GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILG 266 (429)
Q Consensus 208 ~----------------s~~~~l~~~g~i-~~~Fsl~l~~~--~~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~ 266 (429)
. +++++|++||+| +++||+||.+. ..|.|+|| |.+++.|+++|+|+... .+|.|.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~ 200 (339)
T 3fv3_A 125 NEAVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSS----QALTIS 200 (339)
T ss_dssp GCCCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCCS----SSCEEE
T ss_pred ccccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecccC----ccEEEE
Confidence 3 399999999999 99999999854 48999999 88899999999999876 699999
Q ss_pred ecEEEECCEEeccCCCcEEEecCCcceeecHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceecCCCcCcccccccCccE
Q 014185 267 PAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPL 346 (429)
Q Consensus 267 l~~i~v~~~~~~~~~~~aiiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i 346 (429)
+++|.++++.+.. ...++|||||++++||++++++|.+++++..... ..... -|..+|.. ..+|+|
T Consensus 201 l~~i~v~g~~~~~-~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~---~~~~~-----~~~~~C~~-----~~~p~i 266 (339)
T 3fv3_A 201 LASVNLKGSSFSF-GDGALLDSGTTLTYFPSDFAAQLADKAGARLVQV---ARDQY-----LYFIDCNT-----DTSGTT 266 (339)
T ss_dssp EEEEEESSCEEEE-EEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEE---ETTEE-----EEEECTTC-----CCCSEE
T ss_pred EEEEEECCEeecC-CccEEEeCCCCCEecCHHHHHHHHHHcCCEEccc---cccCc-----eEEEecCC-----CCCCcE
Confidence 9999999988765 3689999999999999999999999998653200 00000 12222322 247999
Q ss_pred EEEEeCCCCceEEEeCCCeEEEEeCCCcEEEEEEcCCCCCCCCceeEcccceeceEEEEeCCCCEEEEecCCCCCccccC
Q 014185 347 ALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSLN 426 (429)
Q Consensus 347 ~~~f~~~~~g~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~c~~~~~~~ 426 (429)
+|+|++ +.+++||+++|+++.. +..|+..+... +.||||++|||++|+|||++++|||||+++|++.++|.
T Consensus 267 ~f~f~~---g~~~~v~~~~~~~~~~-~~~C~~~i~~~-----~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~s~i~ 337 (339)
T 3fv3_A 267 VFNFGN---GAKITVPNTEYVYQNG-DGTCLWGIQPS-----DDTILGDNFLRHAYLLYNLDANTISIAQVKYTTDSSIS 337 (339)
T ss_dssp EEEETT---SCEEEEEGGGGEEECS-SSCEEESEEEC-----SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCCEE
T ss_pred EEEECC---CCEEEECHHHheeeCC-CCeEEEEEEeC-----CcEEeChHHHhCEEEEEECCCCEEEEEecCCCCccceE
Confidence 999986 5899999999998753 45685433332 46999999999999999999999999999999999887
Q ss_pred cc
Q 014185 427 HF 428 (429)
Q Consensus 427 ~~ 428 (429)
+.
T Consensus 338 ~i 339 (339)
T 3fv3_A 338 AV 339 (339)
T ss_dssp EC
T ss_pred EC
Confidence 63
No 7
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1.4e-57 Score=440.30 Aligned_cols=311 Identities=20% Similarity=0.351 Sum_probs=259.1
Q ss_pred eEEeeccCCCCCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCC--CC---------CCCCCCCCCCcCCCCccCCCc
Q 014185 54 VFLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAP--CT---------GCTKPPEKQYKPHKNIVPCSN 122 (429)
Q Consensus 54 ~~~p~~~~~~~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~--c~---------~C~~~~~~~y~~~~S~~~C~~ 122 (429)
+.+|+... ++.|+++|+||||||++.|++||||+++||+|. . |. .|. .++.|+|++|
T Consensus 3 v~~~l~~~---~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~~~C~~~~~~~~~~~C~--~~~~y~~~~S------ 70 (342)
T 3pvk_A 3 VPVTLHNE---QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDV-NVDCQVTYSDQTADFCK--QKGTYDPSGS------ 70 (342)
T ss_dssp EEEEEEEC---SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEE-EEEECCCSTTCCTTGGG--TTCCBCGGGC------
T ss_pred cceEEecC---CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcC-CCCCcccccccccCCCC--CCCcCCCccC------
Confidence 55666643 458999999999999999999999999999865 3 53 343 5789999998
Q ss_pred ccccCCCCCCCCCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCcccccceEEeeeeecCCCCCCCCCCCceEEe
Q 014185 123 PRCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLG 202 (429)
Q Consensus 123 ~~C~~~~~~~t~~~~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlG 202 (429)
+|++. ..|.|.+.|++|+.+.|.+++|+|+| ++..++++.|||++.. ...+||||
T Consensus 71 ---------sT~~~----~~~~~~i~Yg~gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~--------~~~~GilG 125 (342)
T 3pvk_A 71 ---------SASQD----LNTPFKIGYGDGSSSQGTLYKDTVGF----GGVSIKNQVLADVDST--------SIDQGILG 125 (342)
T ss_dssp ---------TTCEE----EEEEEEEECSSSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEE--------SSSSCEEE
T ss_pred ---------cceee----cCCeEEEEecCCCeEEEEEEEEEEEE----CCEEecceEEEEEEcc--------CCCccEEE
Confidence 46664 57899999999977999999999999 8899999999999986 35899999
Q ss_pred cCCCC-------CcHHHHHhhcCCc-cceEEEEeCCC--CceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEE
Q 014185 203 LGRGR-------ISIVSQLREYGLI-RNVIGHCIGQN--GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAEL 270 (429)
Q Consensus 203 Lg~~~-------~s~~~~l~~~g~i-~~~Fsl~l~~~--~~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i 270 (429)
||++. .+++++|++||+| +++||+||.+. ..|.|+|| |.+++.|+++|+|+... .+|.|.+++|
T Consensus 126 Lg~~~~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i 201 (342)
T 3pvk_A 126 VGYKTNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTSD----RELRISLGSV 201 (342)
T ss_dssp CSCGGGCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS----SSCEEEEEEE
T ss_pred ecCccccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCcc----ceEEEEEeEE
Confidence 99976 5799999999999 99999999853 57999999 78899999999999876 6999999999
Q ss_pred EECCEEeccCCCcEEEecCCcceeecHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceecCCCcCcccccccCccEEEEE
Q 014185 271 LYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSF 350 (429)
Q Consensus 271 ~v~~~~~~~~~~~aiiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~~~f 350 (429)
.++++.+...+..++|||||++++||++++++|.+++++.... . .. ...+|..+|. ..|+|+|+|
T Consensus 202 ~v~g~~~~~~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~----~--~~--~~~~~~~~C~-------~~p~i~f~f 266 (342)
T 3pvk_A 202 EVSGKTINTDNVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQ----D--SN--GNSFYEVDCN-------LSGDVVFNF 266 (342)
T ss_dssp EETTEEEEEEEEEEEECTTCSSEEECHHHHHHHHHHTTCEEEE----C--TT--SCEEEEECSC-------CCSEEEEEE
T ss_pred EECCEEecCCCceEEEeCCCCCeecCHHHHHHHHHHcCCeecc----c--CC--CceEEEEecC-------CCCceEEEE
Confidence 9999998776679999999999999999999999999765431 0 00 0112333332 248999999
Q ss_pred eCCCCceEEEeCCCeEEEEe--CCC---cEEEEEEcCCCCCCCCceeEcccceeceEEEEeCCCCEEEEecCCCCCcccc
Q 014185 351 TNRRNSVRLVVPPEAYLVIS--GRK---NVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSL 425 (429)
Q Consensus 351 ~~~~~g~~~~l~~~~y~~~~--~~~---~~C~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~c~~~~~~ 425 (429)
++ |.+++||+++|+++. .++ ..|+..+... +.||||++|||++|+|||++++|||||+++|++.++|
T Consensus 267 ~~---g~~~~vp~~~~~~~~~~~~g~~~~~C~~~i~~~-----~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~s~i 338 (342)
T 3pvk_A 267 SK---NAKISVPASEFAASLQGDDGQPYDKCQLLFDVN-----DANILGDNFLRSAYIVYDLDDNEISLAQVKYTSASSI 338 (342)
T ss_dssp ST---TCEEEEEGGGGEEC----------CEEESEEEC-----TTCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCCE
T ss_pred CC---CCEEEEcHHHheeeccccCCCcCCeeEEEEeeC-----CCeEeCHHHHhcEEEEEECCCCEEEEEecCCCCCCCE
Confidence 97 489999999999863 123 6797666543 4799999999999999999999999999999999998
Q ss_pred Ccc
Q 014185 426 NHF 428 (429)
Q Consensus 426 ~~~ 428 (429)
.++
T Consensus 339 v~i 341 (342)
T 3pvk_A 339 SAL 341 (342)
T ss_dssp EEC
T ss_pred EEe
Confidence 764
No 8
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=3.6e-57 Score=433.68 Aligned_cols=299 Identities=22% Similarity=0.380 Sum_probs=250.9
Q ss_pred CCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCCCCCCCCCCCCcCCCCccCCCcccccCCCCCCCCCCCCCCCCC
Q 014185 64 PLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQC 143 (429)
Q Consensus 64 ~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~~C~~~~~~~y~~~~S~~~C~~~~C~~~~~~~t~~~~~~~~~~ 143 (429)
.+..|+++|+||||+|++.|+|||||+++||+|. +|..| ++.++.|+|++| +|++. ..|
T Consensus 13 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c~~c-~~~~~~y~~~~S---------------sT~~~----~~~ 71 (325)
T 2apr_A 13 NDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIAST-LCTNC-GSGQTKYDPNQS---------------STYQA----DGR 71 (325)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCSSC-CTTSCCBCGGGC---------------TTCEE----EEE
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccC-CCchH-hcCCCCCCcccC---------------CCeee----CCC
Confidence 4668999999999999999999999999999999 99999 778999999998 36654 578
Q ss_pred eeEeEeCCCCeEEEEEEEEEEEEeecCCcccccceEEeeeeecCCCCCCCCCCCceEEecCCCC-------CcHHHHHhh
Q 014185 144 DYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR-------ISIVSQLRE 216 (429)
Q Consensus 144 ~~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~-------~s~~~~l~~ 216 (429)
.|.+.|++|+.+.|.+++|+|+| ++..++++.|||++.....+ .....+||||||++. .+++++|++
T Consensus 72 ~~~i~Yg~Gs~~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~~~f--~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~ 145 (325)
T 2apr_A 72 TWSISYGDGSSASGILAKDNVNL----GGLLIKGQTIELAKREAASF--ASGPNDGLLGLGFDTITTVRGVKTPMDNLIS 145 (325)
T ss_dssp EEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHH--HTSSCSEEEECSCGGGCSSTTCCCHHHHHHH
T ss_pred EEEEEECCCCCEEEEEEEEEEEE----CCEEECcEEEEEEeccCccc--ccCCCceEEEeCCcccccccCCCCHHHHHHh
Confidence 99999999977999999999999 88899999999998763322 123489999999854 368999999
Q ss_pred cCCc-cceEEEEeC---CCCceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEEECCEEeccCCCcEEEecCC
Q 014185 217 YGLI-RNVIGHCIG---QNGRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGA 290 (429)
Q Consensus 217 ~g~i-~~~Fsl~l~---~~~~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGt 290 (429)
||+| +++||+||. ....|.|+|| |++++.|+++|+|+.... .+|.|.+++|+|++ .+...+..+||||||
T Consensus 146 qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~---~~~~v~l~~i~vg~-~~~~~~~~~iiDSGT 221 (325)
T 2apr_A 146 QGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSR---GWWGITVDRATVGT-STVASSFDGILDTGT 221 (325)
T ss_dssp TTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTT---SSCEEEECEEEETT-EEEECCEEEEECTTC
T ss_pred cCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCC---CEEEEEEeEEEECC-EecCCCceEEEecCC
Confidence 9999 999999995 3468999999 677899999999998543 79999999999999 454556799999999
Q ss_pred cceeecHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceecCCCcCcccccccCccEEEEEeCCCCceEEEeCCCeEEEEe
Q 014185 291 SYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVIS 370 (429)
Q Consensus 291 ~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~~~f~~~~~g~~~~l~~~~y~~~~ 370 (429)
++++||+++|+++.+++.+.+.+. ....-.|+. ..+|+|+|+|++ .+++||+++|+++.
T Consensus 222 s~~~lP~~~~~~~~~~~~~~~~~~-------g~~~~~C~~----------~~~p~i~f~f~g----~~~~ip~~~~~~~~ 280 (325)
T 2apr_A 222 TLLILPNNIAASVARAYGASDNGD-------GTYTISCDT----------SAFKPLVFSING----ASFQVSPDSLVFEE 280 (325)
T ss_dssp SSEEEEHHHHHHHHHHHTCEECSS-------SCEEECSCG----------GGCCCEEEEETT----EEEEECGGGGEEEE
T ss_pred ccEECCHHHHHHHHHHHhcccCCC-------CeEEEECCC----------CCCCcEEEEECC----EEEEECHHHEEEcC
Confidence 999999999999999997654311 100112431 238999999988 49999999999865
Q ss_pred CCCcEEEEEEcCCCCCCCCceeEcccceeceEEEEeCCCCEEEEecCC
Q 014185 371 GRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 418 (429)
Q Consensus 371 ~~~~~C~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~ 418 (429)
. +..|++.+...+ .+.||||++|||++|+|||++++|||||+++
T Consensus 281 ~-~~~C~~~i~~~~---~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 281 F-QGQCIAGFGYGN---WGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp E-TTEEEESEEEES---SSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred C-CCeEEEEEEcCC---CCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 4 668987665432 4589999999999999999999999999874
No 9
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=8.4e-57 Score=437.67 Aligned_cols=326 Identities=21% Similarity=0.351 Sum_probs=262.9
Q ss_pred CceeEEeeccCCCCCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCC---CCCCCCCCCCcCCCCccCCCcccccC
Q 014185 51 ASSVFLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT---GCTKPPEKQYKPHKNIVPCSNPRCAA 127 (429)
Q Consensus 51 ~~~~~~p~~~~~~~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~---~C~~~~~~~y~~~~S~~~C~~~~C~~ 127 (429)
.+....|+.. +.+..|+++|.||||+|++.|+|||||+++||+|. +|. .|. .++.|+|++|
T Consensus 5 g~~~~~~l~~--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~~C~--~~~~y~~~~S----------- 68 (361)
T 1mpp_A 5 GSVDTPGLYD--FDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHK-GCDNSEGCV--GKRFFDPSSS----------- 68 (361)
T ss_dssp CCEEEEEEEE--TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCCGGGTCC--SSCCBCGGGC-----------
T ss_pred CccceEEeec--CCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCC-CCCCCccCC--CCCcCCCccC-----------
Confidence 3445678873 45779999999999999999999999999999999 898 676 6789999998
Q ss_pred CCCCCCCCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCcccccceEEeeeeecCCC----CCCCCCCCceEEec
Q 014185 128 LHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNP----GPLSPPDTAGVLGL 203 (429)
Q Consensus 128 ~~~~~t~~~~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~----~~~~~~~~~GIlGL 203 (429)
+|++. ..|.|.+.|++| ++.|.+++|+|+| ++..++++.|||++..... ..+.....+|||||
T Consensus 69 ----sT~~~----~~~~~~i~Yg~G-s~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGL 135 (361)
T 1mpp_A 69 ----STFKE----TDYNLNITYGTG-GANGIYFRDSITV----GGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGA 135 (361)
T ss_dssp ----TTCEE----EEEEEEEECSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEEC
T ss_pred ----CceEe----cCCeEEEEECCc-eEEEEEEEEEEEE----CCEEEeceEEEEEEeccCccccccccccCCCCCEEEe
Confidence 35553 578999999999 5999999999999 8899999999999986430 12223578999999
Q ss_pred CCC------------CCcHHHHHhhcCCc-cceEEEEeCCC-CceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeee
Q 014185 204 GRG------------RISIVSQLREYGLI-RNVIGHCIGQN-GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGP 267 (429)
Q Consensus 204 g~~------------~~s~~~~l~~~g~i-~~~Fsl~l~~~-~~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l 267 (429)
|++ ..+++++|++||+| +++||+||.+. ..|.|+|| |++++.|+++|+|+........+|.|.+
T Consensus 136 g~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l 215 (361)
T 1mpp_A 136 AYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPV 215 (361)
T ss_dssp SCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEE
T ss_pred CCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEE
Confidence 985 45688899999999 99999999874 58999999 6778899999999998732122999999
Q ss_pred cEEEECCEEecc-CCCcEE-EecCCcceeecHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceecCCCcCcccccccC-c
Q 014185 268 AELLYSGKSCGL-KDLTLI-FDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYF-K 344 (429)
Q Consensus 268 ~~i~v~~~~~~~-~~~~ai-iDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~-P 344 (429)
++|+|+++.+.. ....+| |||||++++||++++++|.+++++... .. .......|+. ...+ |
T Consensus 216 ~~i~v~~~~~~~~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~-----~~-~g~~~~~C~~---------~~~~~p 280 (361)
T 1mpp_A 216 TGVKIDGSDAVSFDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT-----ES-QQGYTVPCSK---------YQDSKT 280 (361)
T ss_dssp EEEEETTEEEEEEEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE-----EE-TTEEEEEHHH---------HTTCCC
T ss_pred eEEEECCeeeccCCCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc-----CC-CCcEEEECCC---------cccCCC
Confidence 999999987742 356899 999999999999999999999965422 10 1111123543 1246 9
Q ss_pred cEEEEE--eC-CCCceEEEeCCCeEEEEeC-CCcEEE-EEEcCCCCCCCCceeEcccceeceEEEEeCCCCEEEEecCCC
Q 014185 345 PLALSF--TN-RRNSVRLVVPPEAYLVISG-RKNVCL-GILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDC 419 (429)
Q Consensus 345 ~i~~~f--~~-~~~g~~~~l~~~~y~~~~~-~~~~C~-~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~c 419 (429)
+|+|+| ++ +.++.+++|++++|+++.. ++..|+ ++.... .+.||||++|||++|+|||++++|||||+++|
T Consensus 281 ~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~~----~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~ 356 (361)
T 1mpp_A 281 TFSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDG----GNQFIVGNLFLRFFVNVYDFGKNRIGFAPLAS 356 (361)
T ss_dssp EEEEEEECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEES----SSCCEEEHHHHTTEEEEEETTTTEEEEEEBCT
T ss_pred cEEEEEEcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeCC----CCCEEEChHHhccEEEEEECCCCEEEEEEccc
Confidence 999999 51 0014899999999999765 346897 454432 45899999999999999999999999999999
Q ss_pred CCccc
Q 014185 420 NTLLS 424 (429)
Q Consensus 420 ~~~~~ 424 (429)
+.+.|
T Consensus 357 ~~~~~ 361 (361)
T 1mpp_A 357 GYEND 361 (361)
T ss_dssp TTCCC
T ss_pred CCCCC
Confidence 97654
No 10
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=1.1e-57 Score=444.59 Aligned_cols=310 Identities=17% Similarity=0.313 Sum_probs=253.9
Q ss_pred eeEEeeccCCCCCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCC----CCCCCCCCCCcCCCCccCCCcccccCC
Q 014185 53 SVFLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT----GCTKPPEKQYKPHKNIVPCSNPRCAAL 128 (429)
Q Consensus 53 ~~~~p~~~~~~~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~----~C~~~~~~~y~~~~S~~~C~~~~C~~~ 128 (429)
....|+.. +.+.+|+++|+||||||+|.|+|||||+++||+|. .|. .|. .++.|+|++|
T Consensus 50 ~~~~~l~n--~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~-~C~~~~~~C~--~~~~y~~~~S------------ 112 (383)
T 2x0b_A 50 TSSVILTN--YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSS-KCSRLYTACV--YHKLFDASDS------------ 112 (383)
T ss_dssp -CEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TSCTTSHHHH--TSCCBCGGGC------------
T ss_pred cceEeeee--cCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEecc-CCCCCccccc--CCCCCCCCCC------------
Confidence 34567763 46789999999999999999999999999999998 895 576 6789999998
Q ss_pred CCCCCCCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCcccccceEEeeeeecCCCCCCCCCCCceEEecCCCC-
Q 014185 129 HWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR- 207 (429)
Q Consensus 129 ~~~~t~~~~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~- 207 (429)
+|++. ++|.|.+.|++| ++.|.+++|+|+| ++..++ +.|||++...+. .+....+|||||||++.
T Consensus 113 ---sT~~~----~~~~~~i~Yg~G-s~~G~~~~Dtv~i----g~~~v~-~~Fg~a~~~~g~-~f~~~~~dGIlGLg~~~~ 178 (383)
T 2x0b_A 113 ---SSYKH----NGTELTLRYSTG-TVSGFLSQDIITV----GGITVT-QMFGEVTEMPAL-PFMLAEFDGVVGMGFIEQ 178 (383)
T ss_dssp ---TTCEE----EEEEEEEECSSC-EEEEEEEEEEEEE----TTEEEE-EEEEEEEECCHH-HHTTCSSSEEEECSCGGG
T ss_pred ---CcEEE----CCcEEEEEcCCc-cEEEEEEeeEEEE----cCceEE-EEEEEEEecCCc-ccccCCCceEeccCCCcc
Confidence 46664 678999999999 6999999999999 888899 999999986321 12235789999999965
Q ss_pred -----CcHHHHHhhcCCc-cceEEEEeCCC------CceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEEEC
Q 014185 208 -----ISIVSQLREYGLI-RNVIGHCIGQN------GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYS 273 (429)
Q Consensus 208 -----~s~~~~l~~~g~i-~~~Fsl~l~~~------~~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~ 273 (429)
.+++++|++||+| +++||+||.+. .+|.|+|| |++++.|+++|+|+... .+|.|.+++|+|+
T Consensus 179 s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~----~~w~v~l~~i~v~ 254 (383)
T 2x0b_A 179 AIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT----GVWQIQMKGVSVG 254 (383)
T ss_dssp CGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSST----TSCEEEECEEEES
T ss_pred ccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCC----ceEEEEEeEEEeC
Confidence 3689999999999 99999999864 27999999 67788999999999865 8999999999999
Q ss_pred CEEec-cCCCcEEEecCCcceeecHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceecCCCcCcccccccCccEEEEEeC
Q 014185 274 GKSCG-LKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTN 352 (429)
Q Consensus 274 ~~~~~-~~~~~aiiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~~~f~~ 352 (429)
++.+. ..+..+|+||||+++++|++++++|.+++++.. ......-.|+.. ..+|+|+|+|++
T Consensus 255 ~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~--------~~g~~~v~C~~~---------~~~P~i~f~~~g 317 (383)
T 2x0b_A 255 SSTLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAKK--------RLFDYVVKCNEG---------PTLPDISFHLGG 317 (383)
T ss_dssp SCCCBSTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE--------CSSCEEEEGGGT---------TTCCCEEEEETT
T ss_pred CceEEcCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc--------cCCcEEEecccc---------ccCceEEEEECC
Confidence 98743 356789999999999999999999999996532 111111135432 358999999976
Q ss_pred CCCceEEEeCCCeEEEEeCC--CcEEEE-EEcCCCC-CCCCceeEcccceeceEEEEeCCCCEEEEecCC
Q 014185 353 RRNSVRLVVPPEAYLVISGR--KNVCLG-ILNGSEA-EVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 418 (429)
Q Consensus 353 ~~~g~~~~l~~~~y~~~~~~--~~~C~~-~~~~~~~-~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~ 418 (429)
..++|++++|+++..+ +..|+. +...... +..+.||||++|||++|+|||++++|||||+++
T Consensus 318 ----~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 318 ----KEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp ----EEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ----EEEEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 8999999999986543 458985 4433211 134689999999999999999999999999874
No 11
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=1.2e-56 Score=430.22 Aligned_cols=308 Identities=20% Similarity=0.396 Sum_probs=253.7
Q ss_pred eEEeeccCCCCCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCC--CCCCCCCCCCcCCCCccCCCcccccCCCCC
Q 014185 54 VFLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT--GCTKPPEKQYKPHKNIVPCSNPRCAALHWP 131 (429)
Q Consensus 54 ~~~p~~~~~~~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~--~C~~~~~~~y~~~~S~~~C~~~~C~~~~~~ 131 (429)
+.+|+.. +.+..|+++|.||||+|++.|+|||||+++||+|. +|. .|. .++.|+|++|
T Consensus 2 ~~~~l~n--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~C~--~~~~y~~~~S--------------- 61 (324)
T 1am5_A 2 VTEQMKN--EADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSS-HCSAQACS--NHNKFKPRQS--------------- 61 (324)
T ss_dssp EEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBT-TCCSHHHH--TSCCBCGGGC---------------
T ss_pred ceeeeec--CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC-CCCccccc--CCCcCCCccC---------------
Confidence 3467763 45779999999999999999999999999999998 887 465 6789999988
Q ss_pred CCCCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCcccccceEEeeeeecCCCCCCCCCCCceEEecCCCC----
Q 014185 132 NPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR---- 207 (429)
Q Consensus 132 ~t~~~~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~---- 207 (429)
+|++. .+|.|.+.|++| ++.|.+++|+|+| ++..++++.|||++...+. .+.....+||||||++.
T Consensus 62 sT~~~----~~~~~~i~Yg~G-s~~G~~~~D~v~~----g~~~~~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~ 131 (324)
T 1am5_A 62 STYVE----TGKTVDLTYGTG-GMRGILGQDTVSV----GGGSDPNQELGESQTEPGP-FQAAAPFDGILGLAYPSIAAA 131 (324)
T ss_dssp TTCEE----EEEEEEEECSSC-EEEEEEEEEEEES----SSSCEEEEEEEEEEECCST-TTTTCSSSEEEECSCGGGCGG
T ss_pred CCeEe----CCcEEEEEECCC-CeEEEEEECceeE----CCcEEcccEEEEEEecccc-cccCCCCceEEecCCcccccc
Confidence 35553 578999999999 6799999999999 8889999999999986332 22335789999999964
Q ss_pred --CcHHHHHhhcCCc-cceEEEEeCCC--CceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEEECCEEeccC
Q 014185 208 --ISIVSQLREYGLI-RNVIGHCIGQN--GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLK 280 (429)
Q Consensus 208 --~s~~~~l~~~g~i-~~~Fsl~l~~~--~~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~ 280 (429)
.+++++|++||+| +++||+||.+. ..|.|+|| |++++.|++.|+|+... .+|.|.+++|+|+++.+...
T Consensus 132 ~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~~~ 207 (324)
T 1am5_A 132 GAVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTAE----KYWQVALDGITVNGQTAACE 207 (324)
T ss_dssp GCCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEEE----TTEEEEECEEEETTEECCCC
T ss_pred CCCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCCC----cEEEEEEeEEEECCceeecc
Confidence 4689999999999 99999999864 48999999 67788999999999875 79999999999999876443
Q ss_pred CCcEEEecCCcceeecHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceecCCCcCcccccccCccEEEEEeCCCCceEEE
Q 014185 281 DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLV 360 (429)
Q Consensus 281 ~~~aiiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~~~f~~~~~g~~~~ 360 (429)
...++|||||++++||++++++|.+++++. .. .......|+. .+.+|+|+|+|++ .+++
T Consensus 208 ~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-~~-------~g~~~~~C~~---------~~~~P~i~f~f~g----~~~~ 266 (324)
T 1am5_A 208 GCQAIVDTGTSKIVAPVSALANIMKDIGAS-EN-------QGEMMGNCAS---------VQSLPDITFTING----VKQP 266 (324)
T ss_dssp CEEEEECTTCSSEEECTTTHHHHHHHHTCE-EC-------CCCEECCTTS---------SSSSCCEEEEETT----EEEE
T ss_pred CceEEEecCCccEECCHHHHHHHHHHhCCc-cc-------CCcEEEeCCC---------cccCCcEEEEECC----EEEE
Confidence 478999999999999999999999998654 20 1111122543 1358999999965 8999
Q ss_pred eCCCeEEEEeCCCcEEEEEEcCCCC--CCCCceeEcccceeceEEEEeCCCCEEEEecCC
Q 014185 361 VPPEAYLVISGRKNVCLGILNGSEA--EVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 418 (429)
Q Consensus 361 l~~~~y~~~~~~~~~C~~~~~~~~~--~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~ 418 (429)
|++++|+++. +..|+..+...+. +..+.||||++|||++|+|||++++|||||+++
T Consensus 267 i~~~~y~~~~--~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 267 LPPSAYIEGD--QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp ECHHHHEEES--SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred ECHHHhcccC--CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 9999999976 5679854433221 124689999999999999999999999999974
No 12
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=1.4e-56 Score=430.74 Aligned_cols=310 Identities=18% Similarity=0.302 Sum_probs=254.5
Q ss_pred EEeeccCCCCCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCCCCCCCCCCCCcCCCCccCCCcccccCCCCCCCC
Q 014185 55 FLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPP 134 (429)
Q Consensus 55 ~~p~~~~~~~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~~C~~~~~~~y~~~~S~~~C~~~~C~~~~~~~t~ 134 (429)
.+|+. .+.+..|+++|+||||+|++.|+|||||+++||+|. +|..|.+..++.|+|++| +|+
T Consensus 4 ~~~l~--~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~C~~~~~y~~~~S---------------sT~ 65 (329)
T 1dpj_A 4 DVPLT--NYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSN-ECGSLACFLHSKYDHEAS---------------SSY 65 (329)
T ss_dssp EEECE--EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHHTSCCBCGGGC---------------TTC
T ss_pred ceeee--ecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecC-CCCCcccCCcCcCCcccC---------------cCe
Confidence 45666 335779999999999999999999999999999999 898733336789999998 365
Q ss_pred CCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCcccccceEEeeeeecCCCCCCCCCCCceEEecCCCCC------
Q 014185 135 RCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRI------ 208 (429)
Q Consensus 135 ~~~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~~------ 208 (429)
+. +.|.|.+.|++| ++.|.+++|+|+| ++.+++++.|||++...+. .+.....+||||||++..
T Consensus 66 ~~----~~~~~~i~Yg~G-s~~G~~~~D~v~i----g~~~~~~~~fg~~~~~~~~-~f~~~~~~GilGLg~~~~s~~~~~ 135 (329)
T 1dpj_A 66 KA----NGTEFAIQYGTG-SLEGYISQDTLSI----GDLTIPKQDFAEATSEPGL-TFAFGKFDGILGLGYDTISVDKVV 135 (329)
T ss_dssp EE----EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEECCHH-HHTTCSCSEEEECSCGGGCGGGCC
T ss_pred EE----CCcEEEEEECCc-eEEEEEEEEEEEE----CCeEECCeEEEEEEecCcc-ccccCCcceEEEeCCchhhccCCC
Confidence 53 678999999999 8999999999999 8889999999999886321 111256899999999653
Q ss_pred cHHHHHhhcCCc-cceEEEEeCCC-----CceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEEECCEEeccC
Q 014185 209 SIVSQLREYGLI-RNVIGHCIGQN-----GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLK 280 (429)
Q Consensus 209 s~~~~l~~~g~i-~~~Fsl~l~~~-----~~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~ 280 (429)
+++++|++||+| +++||+||.+. ..|.|+|| |++++.|+++|+|+... .+|.|.+++|+++++.+...
T Consensus 136 ~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~~~ 211 (329)
T 1dpj_A 136 PPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRK----AYWEVKFEGIGLGDEYAELE 211 (329)
T ss_dssp CHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSSB----TTBEEEEEEEEETTEEEECS
T ss_pred CHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCCC----ceEEEEeeeEEECCeEecCC
Confidence 578999999999 99999999753 37999999 66788999999999865 79999999999999988777
Q ss_pred CCcEEEecCCcceeecHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceecCCCcCcccccccCccEEEEEeCCCCceEEE
Q 014185 281 DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLV 360 (429)
Q Consensus 281 ~~~aiiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~~~f~~~~~g~~~~ 360 (429)
+..++|||||++++||++++++|.+++++... . ..||..+|.. ...+|+|+|+|++ .+++
T Consensus 212 ~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~--------~----~g~~~~~C~~----~~~~P~i~f~f~g----~~~~ 271 (329)
T 1dpj_A 212 SHGAAIDTGTSLITLPSGLAEMINAEIGAKKG--------W----TGQYTLDCNT----RDNLPDLIFNFNG----YNFT 271 (329)
T ss_dssp SCEEEECTTCSCEEECHHHHHHHHHHHTCEEC--------T----TSSEEECGGG----GGGCCCEEEEETT----EEEE
T ss_pred CccEEeeCCCCcEECCHHHHHHHHHHhCCccC--------C----CCeEEEECCC----CCcCCcEEEEECC----EEEE
Confidence 78999999999999999999999999864311 1 1134444432 2358999999976 8999
Q ss_pred eCCCeEEEEeCCCcEEEEEEcCCCC--CCCCceeEcccceeceEEEEeCCCCEEEEecCC
Q 014185 361 VPPEAYLVISGRKNVCLGILNGSEA--EVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 418 (429)
Q Consensus 361 l~~~~y~~~~~~~~~C~~~~~~~~~--~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~ 418 (429)
|++++|+++.. ..|+..+...+. +..+.||||++|||++|+|||++++|||||+++
T Consensus 272 i~~~~y~~~~~--~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 272 IGPYDYTLEVS--GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp ECTTTSEEEET--TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ECHHHhEecCC--CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 99999999754 579854432211 134689999999999999999999999999875
No 13
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=1.1e-55 Score=435.52 Aligned_cols=347 Identities=19% Similarity=0.343 Sum_probs=263.2
Q ss_pred ceeEEeeccCCCCCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCCCCCCCCCCCCcCCCCccCCCcccccCCCCC
Q 014185 52 SSVFLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWP 131 (429)
Q Consensus 52 ~~~~~p~~~~~~~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~~C~~~~~~~y~~~~S~~~C~~~~C~~~~~~ 131 (429)
+.+.+||.++. .++.|+++|.||||+|++.|+|||||+++||+|. +| . ....|. .++|.++.|...+.+
T Consensus 8 ~~~~~pl~~~~-~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~~---~--~Sst~~----~~~C~s~~C~~~~~~ 76 (403)
T 3aup_A 8 NLVVLPVQNDG-STGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCE-QQ---Y--SSKTYQ----APFCHSTQCSRANTH 76 (403)
T ss_dssp CCEEEEEEECT-TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS-SC---C--CCSSCB----CCCTTBHHHHHTTCC
T ss_pred ccEEEeeecCC-CCceEEEEEECCCCCceeEEEEECCCCceeECCC-CC---C--CCCCCC----ccCCCCccccCcccc
Confidence 46778998643 5789999999999999999999999999999887 54 2 112222 479999999866432
Q ss_pred --------CCCCCCCCCCCCeeEeEeC-CCCeEEEEEEEEEEEEeecCCc-------ccccceEEeeeeecCCCCCCCCC
Q 014185 132 --------NPPRCKHPNDQCDYEIEYG-DGGSSIGALVTDLFPLRFSNGS-------VFNVPLTFGCGYNQHNPGPLSPP 195 (429)
Q Consensus 132 --------~t~~~~~~~~~~~~~~~Y~-~gs~~~G~~~~D~v~l~~~~g~-------~~~~~~~fg~~~~~~~~~~~~~~ 195 (429)
+...|. ++.|.|.+.|+ +++.+.|.+++|+|+|+..+|. +.++++.|||++...... +...
T Consensus 77 ~c~~c~~~~~s~~~--~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~-~~~~ 153 (403)
T 3aup_A 77 QCLSCPAASRPGCH--KNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQK-GLPR 153 (403)
T ss_dssp CEEECSSSCBTTBC--SSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSS-SSST
T ss_pred CccccCCCCCCCCC--CCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCccccccc-CCCC
Confidence 012242 25789999998 6779999999999999543322 678899999999863220 1125
Q ss_pred CCceEEecCCCCCcHHHHHhhcCCccceEEEEeCC--CCceeEEeC-CCCCC--C-C-----CcEEeecccCCCCCCCEE
Q 014185 196 DTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQ--NGRGVLFLG-DGKVP--S-S-----GVAWTPMLQNSADLKHYI 264 (429)
Q Consensus 196 ~~~GIlGLg~~~~s~~~~l~~~g~i~~~Fsl~l~~--~~~G~l~~G-d~~~~--~-g-----~l~~~p~~~~~~~~~~w~ 264 (429)
..+||||||++..+++.||.+....+++||+||.+ ...|.|+|| |+.++ . | ++.|+|+...+ ..+|.
T Consensus 154 ~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGgd~~~~~~~~G~~~~~~l~~~Pl~~~~--~~~y~ 231 (403)
T 3aup_A 154 NTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITL--QGEYN 231 (403)
T ss_dssp TCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESCHHHHC--CTTCCTTTTEEEEECEECT--TSCEE
T ss_pred CCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECCCchhccccccccccCceeecccccCC--CCcce
Confidence 78999999999999999996544338999999986 468999999 45455 4 5 99999999864 26999
Q ss_pred eeecEEEECCEEe-ccCC----------CcEEEecCCcceeecHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceecCCC
Q 014185 265 LGPAELLYSGKSC-GLKD----------LTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPF 333 (429)
Q Consensus 265 v~l~~i~v~~~~~-~~~~----------~~aiiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~ 333 (429)
|.+++|+|+++.+ .++. ..+||||||++++||+++|++|.+++.+.+.. +........+..|+..
T Consensus 232 v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~--~~~~~~~~~~~~c~~c-- 307 (403)
T 3aup_A 232 VRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPK--QAQVKSVAPFGLCFNS-- 307 (403)
T ss_dssp ECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCG--GGEECCCTTCSCEECG--
T ss_pred EEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhcc--ccccCCCCCCCceEEC--
Confidence 9999999999887 5422 34999999999999999999999999765431 1122122234568753
Q ss_pred cCcccccccCccEEEEEeCCCCceEEEeCCCeEEEEeCCCcEEEEEEcCCCCCCCCceeEcccceeceEEEEeCCCCEEE
Q 014185 334 KALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIG 413 (429)
Q Consensus 334 ~~~~~~~~~~P~i~~~f~~~~~g~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~iG 413 (429)
.. .+.+|+|+|+|+++. +++++|++++|+++..++..|+++...... ..+.||||+.|||++|+|||++++|||
T Consensus 308 ~~----~~~~P~i~f~f~g~~-~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~-~~~~~ILG~~fl~~~yvvfD~~~~rIG 381 (403)
T 3aup_A 308 NK----INAYPSVDLVMDKPN-GPVWRISGEDLMVQAQPGVTCLGVMNGGMQ-PRAEITLGARQLEENLVVFDLARSRVG 381 (403)
T ss_dssp GG----CCCCCCEEEEESSTT-CCEEEECHHHHEEEC---CEEECEEECCSC-CSSSEEECHHHHTTSCEEEETTTTEEE
T ss_pred CC----cCcCCcEEEEEcCCC-ceEEEEcccceEEEcCCCeEEEEEEcCCCC-CCCcEEEChHHhcCeEEEEECCCCEEE
Confidence 22 126899999999821 169999999999976656789977765421 235899999999999999999999999
Q ss_pred E-------ecCCCCCccc
Q 014185 414 W-------KPEDCNTLLS 424 (429)
Q Consensus 414 f-------a~~~c~~~~~ 424 (429)
| ++++|++..+
T Consensus 382 f~A~~~~~~~~~C~~~~~ 399 (403)
T 3aup_A 382 FSTSSLHSHGVKCADLFN 399 (403)
T ss_dssp EESSCGGGGTCCGGGSCC
T ss_pred EecccccccCCCcccccc
Confidence 9 6778876544
No 14
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=5.9e-57 Score=431.80 Aligned_cols=306 Identities=20% Similarity=0.316 Sum_probs=250.7
Q ss_pred eeccCCCCCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCCCCCCCCCCCCcCCCCccCCCcccccCCCCCCCCCC
Q 014185 57 RALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRC 136 (429)
Q Consensus 57 p~~~~~~~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~~C~~~~~~~y~~~~S~~~C~~~~C~~~~~~~t~~~ 136 (429)
||. .+.+..|+++|+||||||+++|++||||+++||+|. +|..|.+..++.|+|++| +|++.
T Consensus 4 ~l~--n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~-~C~~~~C~~~~~y~~~~S---------------sT~~~ 65 (320)
T 4aa9_A 4 PLT--SYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSI-YCKSNVCKNHHRFDPRKS---------------STFRN 65 (320)
T ss_dssp ------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHHTSCCBCGGGC---------------TTCEE
T ss_pred cce--eccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCC-CCCccccCCCCCCCCCCC---------------cCeEc
Confidence 555 345778999999999999999999999999999998 898544447899999998 46664
Q ss_pred CCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCcccccceEEeeeeecCCCCCCCCCCCceEEecCCCC------CcH
Q 014185 137 KHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR------ISI 210 (429)
Q Consensus 137 ~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~------~s~ 210 (429)
..|.|.+.|++| ++.|.+++|+|+| ++..++++.|||++..... .+.....+||||||++. .++
T Consensus 66 ----~~~~~~i~Yg~g-s~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~~~~~ 135 (320)
T 4aa9_A 66 ----LGKPLSIHYGTG-SMEGFLGYDTVTV----SNIVDPNQTVGLSTEQPGE-VFTYSEFDGILGLAYPSLASEYSVPV 135 (320)
T ss_dssp ----EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEECCSH-HHHSCCCSEEEECSCGGGSCTTCCCH
T ss_pred ----CCcEEEEEECCc-EEEEEEEEEEEEE----CCEeecCeEEEEEEEcccc-cccccCcccEEecCcccccccCCCCH
Confidence 578999999999 6899999999999 8899999999999986331 11124579999999853 569
Q ss_pred HHHHhhcCCc-cceEEEEeCCC-CceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEEECCEEecc-CCCcEE
Q 014185 211 VSQLREYGLI-RNVIGHCIGQN-GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGL-KDLTLI 285 (429)
Q Consensus 211 ~~~l~~~g~i-~~~Fsl~l~~~-~~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~-~~~~ai 285 (429)
+++|++||.| +++||+||.+. ..|.|+|| |.+++.|+++|+|+... .+|.|.+++|+++++.+.. ....++
T Consensus 136 ~~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~w~v~l~~i~v~~~~~~~~~~~~~i 211 (320)
T 4aa9_A 136 FDNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVTLQ----QYWQFTVDSVTINGVAVACVGGCQAI 211 (320)
T ss_dssp HHHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECSSB----TTBEEEECEEEETTEEEESTTCEEEE
T ss_pred HHHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEcccC----CceEEEEeEEEECCEEeccCCCcEEE
Confidence 9999999999 99999999974 78999999 77888999999999865 8999999999999988765 357899
Q ss_pred EecCCcceeecHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceecCCCcCcccccccCccEEEEEeCCCCceEEEeCCCe
Q 014185 286 FDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEA 365 (429)
Q Consensus 286 iDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~~~f~~~~~g~~~~l~~~~ 365 (429)
|||||++++||++++++|.+++++.... .. .|..+|.. ...+|+|+|+|++ .+++|++++
T Consensus 212 iDsGtt~~~lP~~~~~~i~~~~~~~~~~-------~g-----~~~~~C~~----~~~~p~i~f~f~g----~~~~l~~~~ 271 (320)
T 4aa9_A 212 LDTGTSVLFGPSSDILKIQMAIGATENR-------YG-----EFDVNCGN----LRSMPTVVFEING----RDYPLSPSA 271 (320)
T ss_dssp ECTTCSSEEEEHHHHHHHHHHTTCEECT-------TS-----CEEECGGG----GGGCCCEEEEETT----EEEEECHHH
T ss_pred EECCCCcEECCHHHHHHHHHHhCCcccC-------CC-----cEEEeCCC----CCcCceEEEEECC----EEEEECHHH
Confidence 9999999999999999999998653220 11 12222322 1358999999976 899999999
Q ss_pred EEEEeCCCcEEEEEEcCCCCCCCCceeEcccceeceEEEEeCCCCEEEEecCC
Q 014185 366 YLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 418 (429)
Q Consensus 366 y~~~~~~~~~C~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~ 418 (429)
|+.+ ++..|+..+.... .++.||||++|||++|+|||++++|||||+++
T Consensus 272 y~~~--~~~~C~~~i~~~~--~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 272 YTSK--DQGFCTSGFQGDN--NSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp HEEE--ETTEEEESEEEET--TCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred hccC--CCCeEEEEEEcCC--CCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 9976 4567985443321 24579999999999999999999999999975
No 15
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=2.1e-56 Score=429.11 Aligned_cols=303 Identities=18% Similarity=0.320 Sum_probs=248.8
Q ss_pred CCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCCCCCCCCCCCCcCCCCccCCCcccccCCCCCCCCCCCCCCCCC
Q 014185 64 PLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQC 143 (429)
Q Consensus 64 ~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~~C~~~~~~~y~~~~S~~~C~~~~C~~~~~~~t~~~~~~~~~~ 143 (429)
.+..|+++|+||||+|++.|+|||||+++||+|. +|..|.++.++.|+|++| +|++.. +.|
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~~~~~~y~~~~S---------------sT~~~~---~~~ 73 (329)
T 3c9x_A 13 ADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSS-ETPKSSATGHAIYTPSKS---------------STSKKV---SGA 73 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBT-TSCHHHHTTSCCBCGGGC---------------TTCEEC---TTC
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecC-CCCccccCCCCcCCcccC---------------cCceEc---CCC
Confidence 4668999999999999999999999999999999 899887778999999988 355531 467
Q ss_pred eeEeEeCCCCeEEEEEEEEEEEEeecCCcccccceEEeeeeecCCCCCCCCCCCceEEecCCCC---------CcHHHHH
Q 014185 144 DYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR---------ISIVSQL 214 (429)
Q Consensus 144 ~~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~---------~s~~~~l 214 (429)
.|.+.|++|+.+.|.+++|+|+| ++..++++.|||++.....+ ......+||||||++. .+++++|
T Consensus 74 ~~~i~Yg~Gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~~-~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l 148 (329)
T 3c9x_A 74 SWSISYGDGSSSSGDVYTDKVTI----GGFSVNTQGVESATRVSTEF-VQDTVISGLVGLAFDSGNQVRPHPQKTWFSNA 148 (329)
T ss_dssp BEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHH-HHCTTCCEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred eEEEEeCCCCcEEEEEEEEEEEE----CCEEEcceEEEEEEecCccc-cccCCCceeEEeCcccccccCCCCCCCHHHHH
Confidence 99999999977999999999999 88889999999999763221 1114689999999953 3589999
Q ss_pred hhcCCc-cceEEEEeCCCCceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEEECCEEeccCCCcEEEecCCc
Q 014185 215 REYGLI-RNVIGHCIGQNGRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGAS 291 (429)
Q Consensus 215 ~~~g~i-~~~Fsl~l~~~~~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGt~ 291 (429)
+++ | +++||+||.++..|.|+|| |++++.|++.|+|+.... .+|.|.+++|+|+++.+...+..+||||||+
T Consensus 149 ~~~--i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~---~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt 223 (329)
T 3c9x_A 149 ASS--LAEPLFTADLRHGQNGSYNFGYIDTSVAKGPVAYTPVDNSQ---GFWEFTASGYSVGGGKLNRNSIDGIADTGTT 223 (329)
T ss_dssp HTT--SSSSEEEEECCSSSCEEEEESSCCGGGCSSCEEEEECBCTT---SSCEEEECCEEETTCCCCSCCEEEEECTTCC
T ss_pred HHh--cCCCEEEEEecCCCCcEEEEeCcChhhcccceEEEEccCCC---ceEEEEEeeEEECCEeccCCCceEEEECCCC
Confidence 986 7 9999999998779999999 677899999999998543 7999999999999987765677999999999
Q ss_pred ceeecHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceecCCCcCcccccccCccEEEEEeCCCCceEEEeCCCeEEEEeC
Q 014185 292 YAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISG 371 (429)
Q Consensus 292 ~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~~~f~~~~~g~~~~l~~~~y~~~~~ 371 (429)
+++||++++++|.+++.++... . ......-.|+ ..+|+|+|+|++ .+++||+++|++...
T Consensus 224 ~~~lp~~~~~~i~~~i~~a~~~----~-~~~~~~~~C~-----------~~~P~i~f~f~g----~~~~ip~~~~~~~~~ 283 (329)
T 3c9x_A 224 LLLLDDNVVDAYYANVQSAQYD----N-QQEGVVFDCD-----------EDLPSFSFGVGS----STITIPGDLLNLTPL 283 (329)
T ss_dssp SEEECHHHHHHHHTTCTTCEEE----T-TTTEEEEETT-----------CCCCCEEEEETT----EEEEECGGGGEEEES
T ss_pred cEeCCHHHHHHHHHhCCCcEEc----C-CCCEEEEECC-----------CCCCcEEEEECC----EEEEECHHHeeeecc
Confidence 9999999999999887433210 0 0011011243 248999999986 899999999998753
Q ss_pred C--CcEEEEEEcCCCCCCCCceeEcccceeceEEEEeCCCCEEEEecC
Q 014185 372 R--KNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPE 417 (429)
Q Consensus 372 ~--~~~C~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~ 417 (429)
+ ...|++.+...+ ..+.||||++|||++|+|||++++|||||+.
T Consensus 284 ~~~~~~C~~~i~~~~--~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 284 EEGSSTCFGGLQSSS--GIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp STTCSEEEESEEECT--TTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred CCCCCeEEEEEEcCC--CCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 3 378987554332 2468999999999999999999999999974
No 16
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=2.3e-56 Score=427.92 Aligned_cols=306 Identities=19% Similarity=0.323 Sum_probs=250.3
Q ss_pred EEeeccCCCCCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCC--CCCCCCCCCCCcCCCCccCCCcccccCCCCCC
Q 014185 55 FLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPC--TGCTKPPEKQYKPHKNIVPCSNPRCAALHWPN 132 (429)
Q Consensus 55 ~~p~~~~~~~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c--~~C~~~~~~~y~~~~S~~~C~~~~C~~~~~~~ 132 (429)
..|+.. +.+..|+++|.||||+|++.|+|||||+++||+|. +| ..|. .++.|+|++| +
T Consensus 5 ~~~l~n--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~C~--~~~~y~~~~S---------------s 64 (323)
T 3cms_A 5 SVPLTN--YLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSI-YCKSNACK--NHQRFDPRKS---------------S 64 (323)
T ss_dssp EEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHH--TSCCBCGGGC---------------T
T ss_pred eeeeEe--ccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCC-CCCccccc--CCCCCCCccC---------------C
Confidence 456763 45779999999999999999999999999999998 89 4565 6789999998 3
Q ss_pred CCCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCcccccceEEeeeeecCCCCCCCCCCCceEEecCCCC-----
Q 014185 133 PPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR----- 207 (429)
Q Consensus 133 t~~~~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~----- 207 (429)
|++. .+|.|.+.|++| ++.|.+++|+|+| ++.+++++.|||++...+. .+.....+||||||++.
T Consensus 65 T~~~----~~~~~~i~Yg~G-s~~G~~~~D~v~i----g~~~~~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~ 134 (323)
T 3cms_A 65 TFQN----LGKPLSIHYGTG-SMQGILGYDTVTV----SNIVDIQQTVGLSTQEPGD-FFTYAEFDGILGMAYPSLASEY 134 (323)
T ss_dssp TCEE----EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEECCSH-HHHHSSCSEEEECSCGGGSCTT
T ss_pred CeEE----CCcEEEEEeCCC-CeEEEEEEEEEEE----CCeEEeccEEEEEEecccc-cccccCCceEEecCcchhhccC
Confidence 6554 678999999999 6999999999999 8888999999999986321 11114679999999964
Q ss_pred -CcHHHHHhhcCCc-cceEEEEeCCC-CceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEEECCEEecc-CC
Q 014185 208 -ISIVSQLREYGLI-RNVIGHCIGQN-GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGL-KD 281 (429)
Q Consensus 208 -~s~~~~l~~~g~i-~~~Fsl~l~~~-~~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~-~~ 281 (429)
.+++++|++||.| +++||+||.+. ..|.|+|| |++++.|++.|+|+... .+|.|.+++|+|+++.+.. .+
T Consensus 135 ~~~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~~~~~ 210 (323)
T 3cms_A 135 SIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVTVQ----QYWQFTVDSVTISGVVVACEGG 210 (323)
T ss_dssp CCCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECSSB----TTBEEEEEEEEETTEEEESTTC
T ss_pred CCCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECccC----CeEEEEEeeEEECCEEeecCCC
Confidence 4699999999999 99999999864 45999999 66788899999999865 7999999999999988754 45
Q ss_pred CcEEEecCCcceeecHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceecCCCcCcccccccCccEEEEEeCCCCceEEEe
Q 014185 282 LTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVV 361 (429)
Q Consensus 282 ~~aiiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~~~f~~~~~g~~~~l 361 (429)
..++|||||++++||++++++|.+++++.... .......|+. .+.+|+|+|+|++ .+++|
T Consensus 211 ~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~-------~g~~~~~C~~---------~~~~P~i~f~f~g----~~~~i 270 (323)
T 3cms_A 211 CQAILDTGTSKLVGPSSDILNIQQAIGATQNQ-------YGEFDIDCDN---------LSYMPTVVFEING----KMYPL 270 (323)
T ss_dssp EEEEECTTCCSEEECHHHHHHHHHHHTCEEET-------TTEEEECTTC---------TTTSCCEEEEETT----EEEEE
T ss_pred cEEEEecCCccEeCCHHHHHHHHHHhCCeecC-------CCcEEEECCC---------CccCceEEEEECC----EEEEE
Confidence 78999999999999999999999998653210 0111112432 1358999999965 89999
Q ss_pred CCCeEEEEeCCCcEEEEEEcCCCCCCCCceeEcccceeceEEEEeCCCCEEEEecCC
Q 014185 362 PPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 418 (429)
Q Consensus 362 ~~~~y~~~~~~~~~C~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~ 418 (429)
++++|+++ ++..|+..+...+ ..+.||||++|||++|+|||++++|||||+++
T Consensus 271 ~~~~y~~~--~~~~C~~~i~~~~--~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 271 TPSAYTSQ--DQGFCTSGFQSEN--HSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp CHHHHEEE--ETTEEEESEEEC-----CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CHHHhccC--CCCEEEEEEEeCC--CCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 99999997 4568986443321 24689999999999999999999999999874
No 17
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=2.1e-56 Score=429.43 Aligned_cols=306 Identities=20% Similarity=0.396 Sum_probs=250.7
Q ss_pred EeeccCCCCCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCCC--CCCCCCCCCcCCCCccCCCcccccCCCCCCC
Q 014185 56 LRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTG--CTKPPEKQYKPHKNIVPCSNPRCAALHWPNP 133 (429)
Q Consensus 56 ~p~~~~~~~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~~--C~~~~~~~y~~~~S~~~C~~~~C~~~~~~~t 133 (429)
+||. +.+..|+++|.||||+|++.|+|||||+++||+|. +|.. |. .++.|+|++| +|
T Consensus 5 ~~l~---~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~C~--~~~~y~~~~S---------------sT 63 (329)
T 1htr_B 5 EPMA---YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSV-YCQSQACT--SHSRFNPSES---------------ST 63 (329)
T ss_dssp CGGG---GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHH--TSCCBCGGGC---------------TT
T ss_pred eeeE---EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC-CCCCcccC--CCCcCCCccC---------------CC
Confidence 4555 35779999999999999999999999999999998 8974 65 6789999988 35
Q ss_pred CCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCcccccceEEeeeeecCCCCCCCCCCCceEEecCCCCC-----
Q 014185 134 PRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRI----- 208 (429)
Q Consensus 134 ~~~~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~~----- 208 (429)
++. .+|.|.+.|++| ++.|.+++|+|+| ++..++++.|||++...+. .+.....+||||||++..
T Consensus 64 ~~~----~~~~~~i~Yg~g-s~~G~~~~D~v~~----g~~~~~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~~ 133 (329)
T 1htr_B 64 YST----NGQTFSLQYGSG-SLTGFFGYDTLTV----QSIQVPNQEFGLSENEPGT-NFVYAQFDGIMGLAYPALSVDEA 133 (329)
T ss_dssp CEE----EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEESSCSSG-GGGGCSCCEEEECCCCSCCCTTC
T ss_pred eEE----CCcEEEEEeCCC-CeEEEEEeeeEEE----cceEECceEEEEEEEcccc-ccccCCCceEEecCCCcccccCC
Confidence 553 578999999999 6799999999999 8899999999999876332 122256899999999653
Q ss_pred -cHHHHHhhcCCc-cceEEEEeCCCC---ceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEEECCEEec--c
Q 014185 209 -SIVSQLREYGLI-RNVIGHCIGQNG---RGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCG--L 279 (429)
Q Consensus 209 -s~~~~l~~~g~i-~~~Fsl~l~~~~---~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~--~ 279 (429)
+++++|++||+| +++||+||.+.. .|.|+|| |++++.|++.|+|+... .+|.|.+++|+|+++.+. .
T Consensus 134 ~~~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~~~~ 209 (329)
T 1htr_B 134 TTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQE----LYWQIGIEEFLIGGQASGWCS 209 (329)
T ss_dssp CSHHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCSS----SSCEEEECEEEETTEECCTTT
T ss_pred CCHHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCCC----ceEEEEEeEEEECCceeeecC
Confidence 689999999999 999999998653 7999999 66788999999999865 799999999999998764 3
Q ss_pred CCCcEEEecCCcceeecHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceecCCCcCcccccccCccEEEEEeCCCCceEE
Q 014185 280 KDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRL 359 (429)
Q Consensus 280 ~~~~aiiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~~~f~~~~~g~~~ 359 (429)
.+..++|||||++++||++++++|.+++++.... .......|+. .+.+|+|+|+|++ .++
T Consensus 210 ~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~~-------~g~~~~~C~~---------~~~~P~i~f~f~g----~~~ 269 (329)
T 1htr_B 210 EGCQAIVDTGTSLLTVPQQYMSALLQATGAQEDE-------YGQFLVNCNS---------IQNLPSLTFIING----VEF 269 (329)
T ss_dssp TCEEEEECTTCCSEEEEGGGHHHHHHHHTCEECT-------TSCEEECGGG---------GGGSCCEEEEETT----EEE
T ss_pred CCceEEEecCCccEECCHHHHHHHHHHhCCeecC-------CCeEEEeCCC---------cccCCcEEEEECC----EEE
Confidence 4578999999999999999999999998654320 1111123543 1358999999965 899
Q ss_pred EeCCCeEEEEeCCCcEEEEEEcCCCC--CCCC-ceeEcccceeceEEEEeCCCCEEEEecCC
Q 014185 360 VVPPEAYLVISGRKNVCLGILNGSEA--EVGE-NNIIGEIFMQDKMVIYDNEKQRIGWKPED 418 (429)
Q Consensus 360 ~l~~~~y~~~~~~~~~C~~~~~~~~~--~~~~-~~ilG~~fl~~~y~vfD~~~~~iGfa~~~ 418 (429)
+|++++|+++.. + .|+..+...+. +.++ .||||++|||++|+|||++++|||||+++
T Consensus 270 ~i~~~~y~~~~~-g-~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 270 PLPPSSYILSNN-G-YCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp EECHHHHEEECS-S-CEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EECHHHhcccCC-C-EEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 999999999765 4 79854432211 1234 89999999999999999999999999874
No 18
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=4.1e-56 Score=427.09 Aligned_cols=302 Identities=18% Similarity=0.299 Sum_probs=245.9
Q ss_pred CCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCCCCCCCCCCCCcCCCCccCCCcccccCCCCCCCCCCCCCCCCC
Q 014185 64 PLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQC 143 (429)
Q Consensus 64 ~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~~C~~~~~~~y~~~~S~~~C~~~~C~~~~~~~t~~~~~~~~~~ 143 (429)
.+..|+++|.||||+|++.|+|||||+++||+|. +|..|.+ .++.|+|++| +|++.. +.|
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~-~~~~y~~~~S---------------sT~~~~---~~~ 72 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSS-ETTASEV-XQTIYTPSKS---------------TTAKLL---SGA 72 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBT-TSCGGGC--CCCBCGGGC---------------TTCEEE---EEE
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecC-CCCcccc-ccCccCCccC---------------ccceec---CCC
Confidence 4668999999999999999999999999999999 9998887 7889999988 355531 367
Q ss_pred eeEeEeCCCCeEEEEEEEEEEEEeecCCcccccceEEeeeeecCCCCCCCCCCCceEEecCCCC---------CcHHHHH
Q 014185 144 DYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR---------ISIVSQL 214 (429)
Q Consensus 144 ~~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~---------~s~~~~l 214 (429)
.|.+.|++|+.+.|.+++|+|+| ++..++++.|||++.....+ ......+||||||++. .+++++|
T Consensus 73 ~~~i~Yg~Gs~~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~~~~-~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l 147 (329)
T 1oew_A 73 TWSISYGDGSSSSGDVYTDTVSV----GGLTVTGQAVESAKKVSSSF-TEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNA 147 (329)
T ss_dssp EEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHH-HHCTTCCEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred eEEEEeCCCCcEEEEEEEEEEEE----CCEEEeeeEEEEEEecCccc-cccCCCceEEEeccccccccCcCCCCCHHHHH
Confidence 99999999977999999999999 88899999999999863321 1113689999999953 3589999
Q ss_pred hhcCCc-cceEEEEeCCCCceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEEECCEEeccCCCcEEEecCCc
Q 014185 215 REYGLI-RNVIGHCIGQNGRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGAS 291 (429)
Q Consensus 215 ~~~g~i-~~~Fsl~l~~~~~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGt~ 291 (429)
+++ | +++||+||.++..|.|+|| |++++.|+++|+|+.... .+|.|.+++|+|+++.+......+||||||+
T Consensus 148 ~~~--i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~---~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt 222 (329)
T 1oew_A 148 KAS--LDSPVFTADLGYHAPGTYNFGFIDTTAYTGSITYTAVSTKQ---GFWEWTSTGYAVGSGTFKSTSIDGIADTGTT 222 (329)
T ss_dssp TTT--SSSSEEEEECCSSSCEEEEESCCCTTSSSSCCEEEECBCTT---SSCEEEEEEEEETTSCCEEEEEEEEECTTCC
T ss_pred HHh--ccCcEEEEEccCCCCeEEEEeccChHhcccceEEEEccCCC---ceEEEEEeeEEECCeeccCCCceEEEeCCCC
Confidence 987 7 9999999998778999999 778899999999998543 7999999999999987655567899999999
Q ss_pred ceeecHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceecCCCcCcccccccCccEEEEEeCCCCceEEEeCCCeEEEEeC
Q 014185 292 YAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISG 371 (429)
Q Consensus 292 ~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~~~f~~~~~g~~~~l~~~~y~~~~~ 371 (429)
+++||++++++|++++.+... ..........|+ ..+|+|+|+|+ |.+++||+++|+++..
T Consensus 223 ~~~lP~~~~~~l~~~i~~a~~-----~~~~g~~~~~C~-----------~~~P~i~f~fg----g~~~~ip~~~~~~~~~ 282 (329)
T 1oew_A 223 LLYLPATVVSAYWAQVSGAKS-----SSSVGGYVFPCS-----------ATLPSFTFGVG----SARIVIPGDYIDFGPI 282 (329)
T ss_dssp SEEECHHHHHHHHTTSTTCEE-----ETTTTEEEEETT-----------CCCCCEEEEET----TEEEEECHHHHEEEES
T ss_pred CEECCHHHHHHHHHhCCCcEE-----cCCCCEEEEECC-----------CCCCcEEEEEC----CEEEEECHHHeeeeec
Confidence 999999999999988843221 000011111243 24799999994 4899999999998653
Q ss_pred C--CcEEEEEEcCCCCCCCCceeEcccceeceEEEEeC-CCCEEEEecC
Q 014185 372 R--KNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDN-EKQRIGWKPE 417 (429)
Q Consensus 372 ~--~~~C~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~-~~~~iGfa~~ 417 (429)
+ ...|++.+...+ ..+.||||++|||++|+|||+ +++|||||+.
T Consensus 283 ~~~~~~C~~~i~~~~--~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 283 STGSSSCFGGIQSSA--GIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp STTCSEEEESEEEST--TTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred CCCCCeEEEEEEeCC--CCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 2 468987554332 246899999999999999999 9999999974
No 19
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=6e-56 Score=428.68 Aligned_cols=312 Identities=16% Similarity=0.309 Sum_probs=256.1
Q ss_pred CceeEEeeccCCCCCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCC----CCCCCCCCCCcCCCCccCCCccccc
Q 014185 51 ASSVFLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT----GCTKPPEKQYKPHKNIVPCSNPRCA 126 (429)
Q Consensus 51 ~~~~~~p~~~~~~~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~----~C~~~~~~~y~~~~S~~~C~~~~C~ 126 (429)
.+.+.+|+.. +.+..|+++|+||||||++.|++||||+++||+|. +|. .|. .++.|+|++|
T Consensus 5 ~~~~~~~l~n--~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~~~C~--~~~~y~~~~S---------- 69 (341)
T 3k1w_A 5 NTTSSVILTN--YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSS-KCSRLYTACV--YHKLFDASDS---------- 69 (341)
T ss_dssp CBCEEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TSCTTCHHHH--TSCCBCGGGC----------
T ss_pred CCCccccceE--ccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccC-CCCCCCCccc--CCCCCCCCcC----------
Confidence 3456778873 45779999999999999999999999999999998 887 464 6789999998
Q ss_pred CCCCCCCCCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCcccccceEEeeeeecCCCCCCCCCCCceEEecCCC
Q 014185 127 ALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRG 206 (429)
Q Consensus 127 ~~~~~~t~~~~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~ 206 (429)
+|++. ..|.|.+.|++| ++.|.+++|+|+| ++..+ ++.|||++..... .+.....+||||||++
T Consensus 70 -----sT~~~----~~~~~~i~Yg~g-s~~G~~~~D~v~i----g~~~v-~~~fg~~~~~~~~-~~~~~~~~GilGLg~~ 133 (341)
T 3k1w_A 70 -----SSYKH----NGTELTLRYSTG-TVSGFLSQDIITV----GGITV-TQMFGEVTEMPAL-PFMLAEFDGVVGMGFI 133 (341)
T ss_dssp -----TTCEE----EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEE-EEEEEEEEECCHH-HHTTCSSSEEEECSCG
T ss_pred -----cCeeE----CCCEEEEEECCc-EEEEEEEEEEEEE----CCcee-eEEEEEEEEcccc-ccccCCcceEEECCch
Confidence 46664 678999999999 5999999999999 88888 9999999986331 1222568999999996
Q ss_pred CC------cHHHHHhhcCCc-cceEEEEeCCCC------ceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEE
Q 014185 207 RI------SIVSQLREYGLI-RNVIGHCIGQNG------RGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELL 271 (429)
Q Consensus 207 ~~------s~~~~l~~~g~i-~~~Fsl~l~~~~------~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~ 271 (429)
.. +++++|++||.| +++||+||.+.. .|.|+|| |.+++.|+++|+|+... .+|.|.+++|+
T Consensus 134 ~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~w~v~l~~i~ 209 (341)
T 3k1w_A 134 EQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT----GVWQIQMKGVS 209 (341)
T ss_dssp GGCGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSST----TSCEEEECCEE
T ss_pred hhcccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCCC----CEEEEEEeEEE
Confidence 54 589999999999 999999998654 8999999 77888999999999865 89999999999
Q ss_pred ECCEEecc-CCCcEEEecCCcceeecHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceecCCCcCcccccccCccEEEEE
Q 014185 272 YSGKSCGL-KDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSF 350 (429)
Q Consensus 272 v~~~~~~~-~~~~aiiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~~~f 350 (429)
++++.+.. ....++|||||++++||++++++|.+++++... ... |..+|.. ...+|+|+|+|
T Consensus 210 v~~~~~~~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~--------~~g-----~~~~C~~----~~~~p~i~f~f 272 (341)
T 3k1w_A 210 VGSSTLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAKKR--------LFD-----YVVKCNE----GPTLPDISFHL 272 (341)
T ss_dssp ETTEEEECTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC--------SSC-----EEEEGGG----GGGCCCEEEEE
T ss_pred ECCEEeecCCCCEEEEECCCChhcCCHHHHHHHHHHcCCeec--------CCC-----eEEeCCC----CCcCCcEEEEE
Confidence 99986533 457899999999999999999999999965432 111 2223322 23589999999
Q ss_pred eCCCCceEEEeCCCeEEEEeCC--CcEEEEEEcCCCC--CCCCceeEcccceeceEEEEeCCCCEEEEecCC
Q 014185 351 TNRRNSVRLVVPPEAYLVISGR--KNVCLGILNGSEA--EVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 418 (429)
Q Consensus 351 ~~~~~g~~~~l~~~~y~~~~~~--~~~C~~~~~~~~~--~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~ 418 (429)
++ .+++|++++|+++... +..|+..+...+. ...+.||||++|||++|+|||++++|||||+++
T Consensus 273 ~g----~~~~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 273 GG----KEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp TT----EEEEECHHHHBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CC----EEEEECHHHheeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 86 8999999999986542 5789854443211 134689999999999999999999999999986
No 20
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=8.3e-55 Score=426.12 Aligned_cols=342 Identities=17% Similarity=0.319 Sum_probs=257.5
Q ss_pred eeEEeeccCCCCCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCCCCCCCCCCCCcCCCCccCCCcccccCCCCCC
Q 014185 53 SVFLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPN 132 (429)
Q Consensus 53 ~~~~p~~~~~~~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~~C~~~~~~~y~~~~S~~~C~~~~C~~~~~~~ 132 (429)
++.+|+..+. .+.+|+++|+|||| |+|||||+++||+|. +| + .| +.++|.++.|...+.+.
T Consensus 2 ~~~~pv~~~~-~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~-~~---~-----~~----~~~~C~s~~C~~~~~~~ 62 (381)
T 1t6e_X 2 PVLAPVTKDP-ATSLYTIPFHDGAS-----LVLDVAGPLVWSTCD-GG---Q-----PP----AEIPCSSPTCLLANAYP 62 (381)
T ss_dssp CEEEEEEECT-TTCCEEEEEETTEE-----EEEETTCCCEEECCC-TT---C-----CC----CCCBTTSHHHHHHHSSC
T ss_pred ceEEeEEecC-CCcEEEEEEeCCCE-----EEEECCCCceEEeCC-CC---C-----CC----CccCCCCchhccccCCC
Confidence 3677887543 68899999999998 999999999999886 44 2 12 24788888886533221
Q ss_pred CCCCCC-------CCCCC-eeEeEeCCCCeEEEEEEEEEEEEeecCCcccccce----EEeeeeecCCCCCCCCCCCceE
Q 014185 133 PPRCKH-------PNDQC-DYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPL----TFGCGYNQHNPGPLSPPDTAGV 200 (429)
Q Consensus 133 t~~~~~-------~~~~~-~~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~----~fg~~~~~~~~~~~~~~~~~GI 200 (429)
...|.. .+..| .|.+.|++|+.+.|.+++|+|+|+..+|+..++++ .|||+........ ....+||
T Consensus 63 ~~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~--~~~~dGI 140 (381)
T 1t6e_X 63 APGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASL--PRGSTGV 140 (381)
T ss_dssp CTTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTS--CTTEEEE
T ss_pred CCCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCC--CCCCceE
Confidence 223321 12456 59999999977899999999999654444556665 5699987521111 2678999
Q ss_pred EecCCCCCcHHHHHhhcCCccceEEEEeCCCCceeEEeCCCC----CCCCCcEEeecccCCCCCCCEEeeecEEEECCEE
Q 014185 201 LGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGK----VPSSGVAWTPMLQNSADLKHYILGPAELLYSGKS 276 (429)
Q Consensus 201 lGLg~~~~s~~~~l~~~g~i~~~Fsl~l~~~~~G~l~~Gd~~----~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~ 276 (429)
||||++..+++.||.++++++++||+||.+...|.|+||+.. ++.++++|+|+...+.. .+|.|.+++|+|+++.
T Consensus 141 lGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~-~~y~v~l~~i~vg~~~ 219 (381)
T 1t6e_X 141 AGLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGS-PAHYISARSIVVGDTR 219 (381)
T ss_dssp EECSSSTTSHHHHHHHHHTCCSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEECBCCTTC-CSCEECEEEEEETTEE
T ss_pred EEeCCCcchhHHHHhhhcccCceEEEEeCCCCCeeEEeCCcccccccccCcceeeccccCCCC-cceEEEEEEEEEcCEE
Confidence 999999999999999998669999999987678999999432 35799999999875321 3566999999999998
Q ss_pred eccC-----CCcEEEecCCcceeecHHHHHHHHHHHHHHhcC-----CCCccC-CCCCCCCceecCCCcCcccccccCcc
Q 014185 277 CGLK-----DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIG-----TPLKLA-PDDKTLPICWRGPFKALGQVTEYFKP 345 (429)
Q Consensus 277 ~~~~-----~~~aiiDSGt~~~~lp~~~~~~l~~~i~~~~~~-----~~~~~~-~~~~~~~~C~~~~~~~~~~~~~~~P~ 345 (429)
+..+ ...+||||||++++||+++|++|.+++.+.+.. ..+.+. .....+..||+.++.........+|+
T Consensus 220 ~~~~~~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~ 299 (381)
T 1t6e_X 220 VPVPEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVPN 299 (381)
T ss_dssp CCCCTTCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETTEECCCC
T ss_pred ecCCHHHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCcccccCCcCCe
Confidence 8654 246999999999999999999999999886531 111121 12334567987643322122346899
Q ss_pred EEEEEeCCCCceEEEeCCCeEEEEeCCCcEEEEEEcCCCC----CCCCceeEcccceeceEEEEeCCCCEEEEecCCC
Q 014185 346 LALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEA----EVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDC 419 (429)
Q Consensus 346 i~~~f~~~~~g~~~~l~~~~y~~~~~~~~~C~~~~~~~~~----~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~c 419 (429)
|+|+|++ +++++|++++|+++..++..|+++...... +..+.||||+.|||++|+|||++++|||||+++.
T Consensus 300 i~f~f~g---g~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~~~~ 374 (381)
T 1t6e_X 300 VQLGLDG---GSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPH 374 (381)
T ss_dssp EEEEETT---SCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECCT
T ss_pred EEEEECC---CcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEecccC
Confidence 9999987 589999999999976667789987765421 1135899999999999999999999999999765
No 21
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=2e-55 Score=428.60 Aligned_cols=305 Identities=19% Similarity=0.279 Sum_probs=250.8
Q ss_pred eEEeeccCCCCCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCCCCCCCCCCCCcCCCCccCCCcccccCCCCCCC
Q 014185 54 VFLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNP 133 (429)
Q Consensus 54 ~~~p~~~~~~~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~~C~~~~~~~y~~~~S~~~C~~~~C~~~~~~~t 133 (429)
..+|+.. +.+..|+++|.||||+|++.|+|||||+++||+|. +|..+.+..++.|+|++| +|
T Consensus 52 ~~~pl~~--~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~~~~~y~~~~S---------------sT 113 (375)
T 1miq_A 52 DVIELDD--VANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSK-KCNSSGCSIKNLYDSSKS---------------KS 113 (375)
T ss_dssp BCCCGGG--TBCEEEECCCEETTTTEECCEEEETTCCCEEEEBT-TCCSSGGGGSCCBCGGGC---------------TT
T ss_pred ceEEccc--CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccC-CCCcccccCCCcCCCccC---------------Cc
Confidence 3467773 45779999999999999999999999999999999 897433347899999988 36
Q ss_pred CCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCcccccceEEeeeee----cCCCCCCCCCCCceEEecCCCC--
Q 014185 134 PRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYN----QHNPGPLSPPDTAGVLGLGRGR-- 207 (429)
Q Consensus 134 ~~~~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~----~~~~~~~~~~~~~GIlGLg~~~-- 207 (429)
++. .+|.|.+.|++| ++.|.+++|+|+| |+..+++ .|||++. .. . +.....+||||||++.
T Consensus 114 ~~~----~~~~~~i~Yg~G-s~~G~~~~Dtv~i----g~~~v~~-~Fg~~~~~~~~~~-~--f~~~~~dGilGLg~~~~s 180 (375)
T 1miq_A 114 YEK----DGTKVDITYGSG-TVKGFFSKDLVTL----GHLSMPY-KFIEVTDTDDLEP-I--YSSVEFDGILGLGWKDLS 180 (375)
T ss_dssp CEE----EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEE-EEEEEEECGGGTT-H--HHHSCCCEEEECSSCCTT
T ss_pred eEE----CCcEEEEEeCCC-eEEEEEEEEEEEE----cCceECc-EEEEEEecccccc-c--cccCCCceEEeCCCCccc
Confidence 553 578999999999 5999999999999 8888899 9999998 42 1 1125689999999965
Q ss_pred ----CcHHHHHhhcCCc-cceEEEEeCCC--CceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEEECCEEec
Q 014185 208 ----ISIVSQLREYGLI-RNVIGHCIGQN--GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCG 278 (429)
Q Consensus 208 ----~s~~~~l~~~g~i-~~~Fsl~l~~~--~~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~ 278 (429)
.+++++|++||+| +++||+||.+. ..|.|+|| |.+++.|++.|+|+... .+|.|.++ |+|+++.+
T Consensus 181 ~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~w~v~l~-i~v~g~~~- 254 (375)
T 1miq_A 181 IGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHD----LYWQIDLD-VHFGKQTM- 254 (375)
T ss_dssp CSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSSS----SSSEEEEE-EEETTEEE-
T ss_pred ccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCCC----ceEEEEEE-EEECCEEc-
Confidence 4689999999999 99999999865 48999999 66788999999999865 79999999 99999887
Q ss_pred cCCCcEEEecCCcceeecHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceecCCCcCcccccccCccEEEEEeCCCCceE
Q 014185 279 LKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVR 358 (429)
Q Consensus 279 ~~~~~aiiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~~~f~~~~~g~~ 358 (429)
.+..+||||||++++||++++++|.+++++... .. .......|+. ..+|+|+|+|++ ..
T Consensus 255 -~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~-----~~-~g~~~~~C~~----------~~~P~i~f~f~g----~~ 313 (375)
T 1miq_A 255 -EKANVIVDSGTTTITAPSEFLNKFFANLNVIKV-----PF-LPFYVTTCDN----------KEMPTLEFKSAN----NT 313 (375)
T ss_dssp -EEEEEEECTTBSSEEECHHHHHHHHHHHTCEEC-----TT-SSCEEEETTC----------TTCCCEEEECSS----CE
T ss_pred -ccceEEecCCCccEEcCHHHHHHHHHHhCCccc-----CC-CCeEEEECCC----------CCCCcEEEEECC----EE
Confidence 567899999999999999999999999965322 00 1111122432 358999999965 89
Q ss_pred EEeCCCeEEEEeC--CCcEEE-EEEcCCCCCCCCceeEcccceeceEEEEeCCCCEEEEecCC
Q 014185 359 LVVPPEAYLVISG--RKNVCL-GILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 418 (429)
Q Consensus 359 ~~l~~~~y~~~~~--~~~~C~-~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~ 418 (429)
++|++++|+++.. ++..|+ ++..... ..+.||||++|||++|+|||++++|||||+++
T Consensus 314 ~~l~~~~yi~~~~~~g~~~C~~~~~~~~~--~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 314 YTLEPEYYMNPILEVDDTLCMITMLPVDI--DSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp EEECGGGSEEESSSSSCSEEEESEEECCS--SSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEECHHHhEeeccCCCCCeEEEEEEECCC--CCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 9999999999864 345897 5554331 12689999999999999999999999999875
No 22
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=6.6e-55 Score=417.96 Aligned_cols=300 Identities=16% Similarity=0.298 Sum_probs=245.8
Q ss_pred CCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCCCCCCCCCCCCcCCCCccCCCcccccCCCCCCCCCCCCCCCCC
Q 014185 64 PLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQC 143 (429)
Q Consensus 64 ~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~~C~~~~~~~y~~~~S~~~C~~~~C~~~~~~~t~~~~~~~~~~ 143 (429)
.+..|+++|+|| +|++.|+|||||+++||+|. +|..|.++.++.|+|++| +++. +.|
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~S----------------s~~~----~~~ 68 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSD-ELPSSEQTGHDLYTPSSS----------------ATKL----SGY 68 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECT-TSCHHHHTTSCCCBCCSS----------------CEEC----TTC
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeC-CCCccccCCCCCCCchhc----------------CCcc----CCC
Confidence 356899999999 99999999999999999999 899887778999999998 3221 578
Q ss_pred eeEeEeCCCCeEEEEEEEEEEEEeecCCcccccceEEeeeeecCCCCCCCCCCCceEEecCCCC---------CcHHHHH
Q 014185 144 DYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR---------ISIVSQL 214 (429)
Q Consensus 144 ~~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~---------~s~~~~l 214 (429)
.|.+.|++|+.+.|.+++|+|+| ++..++++.|||++.....+ ......+||||||++. .+++++|
T Consensus 69 ~~~i~Yg~Gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~~-~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l 143 (325)
T 1ibq_A 69 SWDISYGDGSSASGDVYRDTVTV----GGVTTNKQAVEAASKISSEF-VQDTANDGLLGLAFSSINTVQPKAQTTFFDTV 143 (325)
T ss_dssp BEEEECSSSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHH-HTSTTCCEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred EEEEEeCCCCEEEEEEEEeEEEE----CCEEEcceEEEEEEecCccc-cccCCCceEEEeCcccccccCcCCCCCHHHHH
Confidence 99999999977999999999999 88999999999999863321 1114689999999954 3588999
Q ss_pred hhcCCc-cceEEEEeCCCCceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEEECCEEeccCCCcEEEecCCc
Q 014185 215 REYGLI-RNVIGHCIGQNGRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGAS 291 (429)
Q Consensus 215 ~~~g~i-~~~Fsl~l~~~~~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGt~ 291 (429)
+++ + +++||+||.++..|.|+|| |++++.|+++|+|+.... .+|.|.+++|+|+++.+...+..+||||||+
T Consensus 144 ~~~--i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~---~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt 218 (325)
T 1ibq_A 144 KSQ--LDSPLFAVQLKHDAPGVYDFGYIDDSKYTGSITYTDADSSQ---GYWGFSTDGYSIGDGSSSSSGFSAIADTGTT 218 (325)
T ss_dssp GGG--SSSSEEEEEEETTEEEEEEESSCCGGGBSSCCEEEECBCTT---SSCEEEECEEEETTSCCBSCCEEEEECTTCC
T ss_pred HHh--cCCcEEEEEecCCCCceEEECCcChhhccCceEEEEcCCCC---ceEEEEECcEEECCeeccCCCceEEEeCCCC
Confidence 987 7 9999999998778999999 677899999999998542 7999999999999987765668999999999
Q ss_pred ceeecHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceecCCCcCcccccccCccEEEEEeCCCCceEEEeCCCeEEEEeC
Q 014185 292 YAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISG 371 (429)
Q Consensus 292 ~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~~~f~~~~~g~~~~l~~~~y~~~~~ 371 (429)
+++||++++++|.+++.++... .. .....-.|+ ..+|+|+|+|++ .+++||+++|++...
T Consensus 219 ~~~lP~~~~~~i~~~i~~a~~~----~~-~g~~~~~C~-----------~~~P~i~f~fgg----~~~~i~~~~~~~~~~ 278 (325)
T 1ibq_A 219 LILLDDEIVSAYYEQVSGAQES----YE-AGGYVFSCS-----------TDLPDFTVVIGD----YKAVVPGKYINYAPV 278 (325)
T ss_dssp SEEECHHHHHHHHTTSTTCBCC----SS-SSSCEEETT-----------CCCCCEEEEETT----EEEEECHHHHEEEES
T ss_pred cEeCCHHHHHHHHHhCCCceEc----Cc-CCeEEEEcC-----------CCCCcEEEEECC----EEEEECHHHhccccc
Confidence 9999999999999988432210 00 011111243 248999999954 899999999998653
Q ss_pred C--CcEEEEEEcCCCCCCCCceeEcccceeceEEEEeCCCCEEEEecCC
Q 014185 372 R--KNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 418 (429)
Q Consensus 372 ~--~~~C~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~ 418 (429)
+ ...|++.+...+ ..+.||||++|||++|+|||++++|||||+++
T Consensus 279 ~~~~~~C~~~i~~~~--~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 279 STGSSTCYGGIQSNS--GLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp STTCSEEEESEEECT--TTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCCCCeEEEEEEcCC--CCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 3 378987554332 24689999999999999999999999999864
No 23
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=4.8e-55 Score=418.39 Aligned_cols=298 Identities=17% Similarity=0.290 Sum_probs=244.2
Q ss_pred CceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCCCCCCCCCCCCcCCCCccCCCcccccCCCCCCCCCCCCCCCCCe
Q 014185 65 LGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCD 144 (429)
Q Consensus 65 ~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~~C~~~~~~~y~~~~S~~~C~~~~C~~~~~~~t~~~~~~~~~~~ 144 (429)
+..|+++|+|| +|++.|+|||||+++||+|. +|..|.++.++.|+|++| +++. ++|.
T Consensus 14 ~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~S----------------s~~~----~~~~ 70 (323)
T 1izd_A 14 DEEYITQVTVG--DDTLGLDFDTGSADLWVFSS-QTPSSERSGHDYYTPGSS----------------AQKI----DGAT 70 (323)
T ss_dssp GCCEEEEEEET--TEEEEEEEETTCCCEEECBT-TSCHHHHTTCCCBCCCTT----------------CEEE----EEEE
T ss_pred CCEEEEEEEEC--CEEEEEEEcCCCcceEEecC-CCCcccccCCCCCCcccc----------------CCcc----CCCe
Confidence 55899999999 89999999999999999999 898887778899999998 3221 5689
Q ss_pred eEeEeCCCCeEEEEEEEEEEEEeecCCcccccceEEeeeeecCCCCCCCCCCCceEEecCCCC---------CcHHHHHh
Q 014185 145 YEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR---------ISIVSQLR 215 (429)
Q Consensus 145 ~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~---------~s~~~~l~ 215 (429)
|.+.|++|+.+.|.+++|+|+| ++.+++++.|||++.....+ ......+||||||++. .+++++|+
T Consensus 71 ~~i~Yg~Gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~~-~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~ 145 (323)
T 1izd_A 71 WSISYGDGSSASGDVYKDKVTV----GGVSYDSQAVESAEKVSSEF-TQDTANDGLLGLAFSSINTVQPTPQKTFFDNVK 145 (323)
T ss_dssp EEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHH-HHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHG
T ss_pred EEEEcCCCCeEEEEEEEEEEEE----CCEEECceEEEEEEeccccc-cccCCCceEEecCcccccccCCCCCCCHHHHHH
Confidence 9999999977999999999999 88999999999999863221 1113679999999953 35899999
Q ss_pred hcCCc-cceEEEEeCCCCceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEEECCEEeccCCCcEEEecCCcc
Q 014185 216 EYGLI-RNVIGHCIGQNGRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASY 292 (429)
Q Consensus 216 ~~g~i-~~~Fsl~l~~~~~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGt~~ 292 (429)
++ + +++||+||.++..|.|+|| |++++.|+++|+|+.... .+|.|.+++|+|++ .+...+..+||||||++
T Consensus 146 ~~--i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~---~~w~v~l~~i~v~~-~~~~~~~~aiiDSGTs~ 219 (323)
T 1izd_A 146 SS--LSEPIFAVALKHNAPGVYDFGYTDSSKYTGSITYTDVDNSQ---GFWGFTADGYSIGS-DSSSDSITGIADTGTTL 219 (323)
T ss_dssp GG--SSSSEEEEECCTTSCEEEEESSCCTTSEEEEEEEEECBCTT---SSCEEEESEEEETT-EEECCCEEEEECTTCCS
T ss_pred Hh--ccCcEEEEEccCCCCCEEEECCcCccccccceEEEECCCCC---ceEEEEECeEEECC-cccCCCceEEEeCCCcc
Confidence 87 7 9999999998778999999 777889999999998542 79999999999999 66556678999999999
Q ss_pred eeecHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceecCCCcCcccccccCccEEEEEeCCCCceEEEeCCCeEEEEeCC
Q 014185 293 AYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGR 372 (429)
Q Consensus 293 ~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~~~f~~~~~g~~~~l~~~~y~~~~~~ 372 (429)
++||++++++|.+++.+.... .. .. .|..+|. ..+|+|+|+|++ .+++||+++|+++..+
T Consensus 220 ~~lp~~~~~~i~~~i~ga~~~----~~-~g-----~~~~~C~------~~~P~i~f~fgg----~~~~i~~~~~~~~~~~ 279 (323)
T 1izd_A 220 LLLDDSIVDAYYEQVNGASYD----SS-QG-----GYVFPSS------ASLPDFSVTIGD----YTATVPGEYISFADVG 279 (323)
T ss_dssp EEECHHHHHHHHTTSTTCEEE----TT-TT-----EEEEETT------CCCCCEEEEETT----EEEEECHHHHEEEECS
T ss_pred eeCCHHHHHHHHHhCCCcEEc----Cc-CC-----EEEEECC------CCCceEEEEECC----EEEecCHHHeEEecCC
Confidence 999999999999988432110 00 00 1111222 247999999954 8999999999987656
Q ss_pred CcEEEEEEcCCCCCCCCceeEcccceeceEEEEeCCCCEEEEecCC
Q 014185 373 KNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 418 (429)
Q Consensus 373 ~~~C~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~ 418 (429)
+..|++.+...+ ..+.||||++|||++|+|||++++|||||+++
T Consensus 280 ~~~C~~~i~~~~--~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 280 NGQTFGGIQSNS--GIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp TTEEEESEEECT--TTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCeEEEEEEcCC--CCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 678987544332 24689999999999999999999999999863
No 24
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=7.2e-55 Score=431.34 Aligned_cols=308 Identities=18% Similarity=0.254 Sum_probs=249.7
Q ss_pred EEeeccCCCCCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCCCCCCCCCCCCcCCCCccCCCcccccCCCCCCCC
Q 014185 55 FLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPP 134 (429)
Q Consensus 55 ~~p~~~~~~~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~~C~~~~~~~y~~~~S~~~C~~~~C~~~~~~~t~ 134 (429)
.+|+. .+.+..|+++|+||||||++.|+|||||+++||+|. +|..+.+..++.|+|++| +|+
T Consensus 129 ~~~L~--n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~-~C~~~~C~~~~~ydps~S---------------sT~ 190 (453)
T 2bju_A 129 NIELV--DFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSV-KCTTAGCLTKHLYDSSKS---------------RTY 190 (453)
T ss_dssp EEEEE--EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSTTGGGSCCBCGGGC---------------TTC
T ss_pred ceeeE--ecCCCEEEEEEEECCCCeEEEEEEECCCcceEEecc-CCCccccCCCCcCCCccC---------------Cce
Confidence 35555 235779999999999999999999999999999999 897444447899999998 366
Q ss_pred CCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCcccccceEEeeeeecC--CCCCCCCCCCceEEecCCCC-----
Q 014185 135 RCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQH--NPGPLSPPDTAGVLGLGRGR----- 207 (429)
Q Consensus 135 ~~~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~--~~~~~~~~~~~GIlGLg~~~----- 207 (429)
+. .+|.|.+.|++| ++.|.+++|+|+| |+.+++ +.|||++... +. .+.....+||||||++.
T Consensus 191 ~~----~~~~~~i~YgdG-s~~G~~~~Dtv~i----g~~~v~-~~Fg~a~~~~~~g~-~f~~~~~dGIlGLg~~~~s~~~ 259 (453)
T 2bju_A 191 EK----DGTKVEMNYVSG-TVSGFFSKDLVTV----GNLSLP-YKFIEVIDTNGFEP-TYTASTFDGILGLGWKDLSIGS 259 (453)
T ss_dssp EE----EEEEEEEECSSS-EEEEEEEEEEEEE----TTEEEE-EEEEEEEECGGGTT-HHHHSSCCEEEECSCGGGSTTC
T ss_pred eE----CCcEEEEEcCCC-CeEEEEEEEEEEE----eCcEEE-EEEEEEEEecccCc-cccccCCceeEeccCCcccccC
Confidence 54 578999999999 5999999999999 888889 9999999863 21 11124689999999954
Q ss_pred -CcHHHHHhhcCCc-cceEEEEeCCC--CceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEEECCEEeccCC
Q 014185 208 -ISIVSQLREYGLI-RNVIGHCIGQN--GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKD 281 (429)
Q Consensus 208 -~s~~~~l~~~g~i-~~~Fsl~l~~~--~~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~ 281 (429)
.+++++|++||.| +++||+||.+. ..|.|+|| |++++.|++.|+|+... .+|.|.++ |+|+++.+ .+
T Consensus 260 ~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~~----~~w~V~l~-I~Vgg~~~--~~ 332 (453)
T 2bju_A 260 VDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNHD----LYWQITLD-AHVGNIML--EK 332 (453)
T ss_dssp CCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEEE----TTEEEEEE-EEETTEEE--EE
T ss_pred CCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCCC----ceEEEEEE-EEECcEEe--cc
Confidence 4689999999999 99999999864 68999999 67788999999999875 79999999 99999432 56
Q ss_pred CcEEEecCCcceeecHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceecCCCcCcccccccCccEEEEEeCCCCceEEEe
Q 014185 282 LTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVV 361 (429)
Q Consensus 282 ~~aiiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~~~f~~~~~g~~~~l 361 (429)
..+||||||++++||++++++|.+++++... . .. .+|..+|.. ..+|+|+|+|++ .+++|
T Consensus 333 ~~aIiDSGTsl~~lP~~~~~~l~~~i~~~~~------~-~g----~~~~v~C~~-----~~~P~itf~fgg----~~~~l 392 (453)
T 2bju_A 333 ANCIVDSGTSAITVPTDFLNKMLQNLDVIKV------P-FL----PFYVTLCNN-----SKLPTFEFTSEN----GKYTL 392 (453)
T ss_dssp EEEEECTTCCSEEECHHHHHHHTTTSSCEEC------T-TS----SCEEEETTC-----TTCCCEEEECSS----CEEEE
T ss_pred ccEEEcCCCCeEecCHHHHHHHHHHhCCccc------C-CC----ceEEEecCC-----CCCCcEEEEECC----EEEEE
Confidence 7899999999999999999999988854211 0 11 022223322 358999999965 89999
Q ss_pred CCCeEEEEeCC--CcEEEEEEcCCCCCCCCceeEcccceeceEEEEeCCCCEEEEecCCC
Q 014185 362 PPEAYLVISGR--KNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDC 419 (429)
Q Consensus 362 ~~~~y~~~~~~--~~~C~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~c 419 (429)
++++|+++... +..|+..+...+. ..+.||||++|||++|+|||++++|||||+++-
T Consensus 393 ~~~~yi~~~~~~g~~~C~~~~~~~~~-~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~~ 451 (453)
T 2bju_A 393 EPEYYLQHIEDVGPGLCMLNIIGLDF-PVPTFILGDPFMRKYFTVFDYDNHSVGIALAKK 451 (453)
T ss_dssp CHHHHEEECTTTSTTEEEECEEECCC-SSCEEEECHHHHHHEEEEEETTTTEEEEEEECS
T ss_pred CHHHhEeecccCCCceEEEEEEeCCC-CCCCEEECHHHhhcEEEEEECCCCEEEEEEccc
Confidence 99999998653 4689854443321 135899999999999999999999999999863
No 25
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=1.3e-54 Score=433.91 Aligned_cols=328 Identities=23% Similarity=0.361 Sum_probs=254.8
Q ss_pred eeEEeeccCCCCCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCC---CCCCCCCCCCcCCCCccCCCcccccCCC
Q 014185 53 SVFLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT---GCTKPPEKQYKPHKNIVPCSNPRCAALH 129 (429)
Q Consensus 53 ~~~~p~~~~~~~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~---~C~~~~~~~y~~~~S~~~C~~~~C~~~~ 129 (429)
...+|+.. +.+..|+++|+||||||++.|+|||||+++||+|. +|. .|. .++.|+|++|
T Consensus 41 ~~~~~l~n--~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~-~C~~~~~C~--~~~~y~~~~S------------- 102 (478)
T 1qdm_A 41 GDIVALKN--YMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSA-KCYFSIACY--LHSRYKAGAS------------- 102 (478)
T ss_dssp SCSGGGCC--GGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCCSCGGGG--GSCCBCGGGC-------------
T ss_pred CceEEeEe--ccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecC-CCCCCcccc--CCCCCCcccC-------------
Confidence 34466663 35778999999999999999999999999999998 885 576 6789999988
Q ss_pred CCCCCCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCcccccceEEeeeeecCCCCCCCCCCCceEEecCCCCC-
Q 014185 130 WPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRI- 208 (429)
Q Consensus 130 ~~~t~~~~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~~- 208 (429)
+|++. .++.|.+.|++| ++.|.+++|+|+| |+..++++.||+++...+. .+.....+||||||++..
T Consensus 103 --sT~~~----~~~~~~i~Yg~G-s~~G~~~~Dtv~i----g~~~v~~~~Fg~a~~~~~~-~f~~~~~dGIlGLg~~~~s 170 (478)
T 1qdm_A 103 --STYKK----NGKPAAIQYGTG-SIAGYFSEDSVTV----GDLVVKDQEFIEATKEPGI-TFLVAKFDGILGLGFKEIS 170 (478)
T ss_dssp --TTCBC----CCCEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEECCBS-HHHHCSSSEEEECSCGGGC
T ss_pred --CCeee----CCcEEEEEcCCC-CeEEEEEEEEEEE----CCeEECCEEEEEEEecCCc-ccccccccceecccccccc
Confidence 46654 678999999999 6999999999999 8888999999999875321 111246799999999654
Q ss_pred -----cHHHHHhhcCCc-cceEEEEeCCC----CceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEEECCEE
Q 014185 209 -----SIVSQLREYGLI-RNVIGHCIGQN----GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKS 276 (429)
Q Consensus 209 -----s~~~~l~~~g~i-~~~Fsl~l~~~----~~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~ 276 (429)
+++++|++||+| +++||+||.+. ..|.|+|| |+.++.|++.|+|+... .+|.|.+++|.|+++.
T Consensus 171 ~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~----~~w~v~l~~i~v~g~~ 246 (478)
T 1qdm_A 171 VGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQK----GYWQFDMGDVLVGGKS 246 (478)
T ss_dssp GGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEE----TTEEEEECCEEETTEE
T ss_pred cCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCC----CeEEEEEeEEEECCEE
Confidence 578999999999 99999999864 48999999 67788999999999865 7999999999999988
Q ss_pred ecc--CCCcEEEecCCcceeecHHHHHHHHHHHHHHh----------------------cCC-------CCccCCCCCC-
Q 014185 277 CGL--KDLTLIFDSGASYAYFTSRVYQEIVSLIMRDL----------------------IGT-------PLKLAPDDKT- 324 (429)
Q Consensus 277 ~~~--~~~~aiiDSGt~~~~lp~~~~~~l~~~i~~~~----------------------~~~-------~~~~~~~~~~- 324 (429)
+.. .+..+|+||||++++||++++++|.+++++.. ... .+..|.....
T Consensus 247 ~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~ 326 (478)
T 1qdm_A 247 TGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTR 326 (478)
T ss_dssp CSTTTTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC------
T ss_pred EeecCCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCccc
Confidence 654 45789999999999999999999999986421 000 0011110000
Q ss_pred -----------------------------------------------------CCceecCCCcC---cccc--cccCccE
Q 014185 325 -----------------------------------------------------LPICWRGPFKA---LGQV--TEYFKPL 346 (429)
Q Consensus 325 -----------------------------------------------------~~~C~~~~~~~---~~~~--~~~~P~i 346 (429)
...|+..+... .-++ ...+|+|
T Consensus 327 ~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~~~lP~i 406 (478)
T 1qdm_A 327 GVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGSMPDI 406 (478)
T ss_dssp ---------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGGTTCCCE
T ss_pred cccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeecccccccccE
Confidence 12343332110 0001 2468999
Q ss_pred EEEEeCCCCceEEEeCCCeEEEEeCC--CcEEEEEEcCCCC--CCCCceeEcccceeceEEEEeCCCCEEEEecCC
Q 014185 347 ALSFTNRRNSVRLVVPPEAYLVISGR--KNVCLGILNGSEA--EVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 418 (429)
Q Consensus 347 ~~~f~~~~~g~~~~l~~~~y~~~~~~--~~~C~~~~~~~~~--~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~ 418 (429)
+|+|++ +.++|+|++|+++..+ +..|++.+...+. +.++.||||+.|||++|+|||++++|||||++.
T Consensus 407 ~f~~gg----~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a~ 478 (478)
T 1qdm_A 407 EFTIGG----KKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 478 (478)
T ss_dssp EEEETT----EEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEECC----EEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeCC
Confidence 999965 8999999999998654 3579875443221 234689999999999999999999999999863
No 26
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=8.8e-55 Score=431.35 Aligned_cols=304 Identities=17% Similarity=0.255 Sum_probs=251.8
Q ss_pred eEEeeccCCCCCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCC--CCCCCCCCCCcCCCCccCCCcccccCCCCC
Q 014185 54 VFLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT--GCTKPPEKQYKPHKNIVPCSNPRCAALHWP 131 (429)
Q Consensus 54 ~~~p~~~~~~~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~--~C~~~~~~~y~~~~S~~~C~~~~C~~~~~~ 131 (429)
..+|+. .+.+..|+++|+||||||++.|++||||+++||+|. +|. .|. .++.|+|++|
T Consensus 127 ~~~pL~--n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~-~C~s~~C~--~~~~ydps~S--------------- 186 (451)
T 3qvc_A 127 DNVELK--DLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSI-KCTSESCE--SKNHYDSSKS--------------- 186 (451)
T ss_dssp CCCCGG--GGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBT-TCCSGGGT--TSCCBCGGGC---------------
T ss_pred Ccccee--ecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC-CCCccccC--CCCCCCCCCC---------------
Confidence 345665 345778999999999999999999999999999999 894 565 7899999998
Q ss_pred CCCCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCcccccceEEeeeee----cCCCCCCCCCCCceEEecCCCC
Q 014185 132 NPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYN----QHNPGPLSPPDTAGVLGLGRGR 207 (429)
Q Consensus 132 ~t~~~~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~----~~~~~~~~~~~~~GIlGLg~~~ 207 (429)
+|++. .++.|.+.|++| ++.|.+++|+|+| |+..++ +.|||++. ..+ +.....+||||||++.
T Consensus 187 sT~~~----~~~~f~i~YgdG-s~~G~~~~Dtv~i----gg~~v~-~~Fg~a~~t~~~~~~---f~~~~~dGILGLg~~~ 253 (451)
T 3qvc_A 187 KTYEK----DDTPVKLTSKAG-TISGIFSKDLVTI----GKLSVP-YKFIEMTEIVGFEPF---YSESDVDGVFGLGWKD 253 (451)
T ss_dssp TTCEE----EEEEEEEECSSE-EEEEEEEEEEEEE----TTEEEE-EEEEEEEEEEECTTH---HHHSCCCEEEECSSBC
T ss_pred ccccc----CCCEEEEEECCC-EEEEEEEEEEEEE----CCEEEE-EEEEEEEeccccCCC---ccCCCCCEEEecCCCc
Confidence 46654 678999999999 5999999999999 889899 99999988 422 2225689999999964
Q ss_pred ------CcHHHHHhhcCCc-cceEEEEeCCC--CceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEEECCEE
Q 014185 208 ------ISIVSQLREYGLI-RNVIGHCIGQN--GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKS 276 (429)
Q Consensus 208 ------~s~~~~l~~~g~i-~~~Fsl~l~~~--~~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~ 276 (429)
.+++++|++||.| +++||+||.+. ..|.|+|| |++++.|+++|+|+... .+|.|.++ |+++++
T Consensus 254 ~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~~----~~w~v~l~-I~Vgg~- 327 (451)
T 3qvc_A 254 LSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNHD----LMWQVDLD-VHFGNV- 327 (451)
T ss_dssp SSSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSST----TSSEEEEE-EEETTE-
T ss_pred ccccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcccC----CeeEEEEE-EEECCc-
Confidence 5799999999999 99999999864 47999999 77889999999999865 89999999 999998
Q ss_pred eccCCCcEEEecCCcceeecHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceecCCCcCcccccccCccEEEEEeCCCCc
Q 014185 277 CGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNS 356 (429)
Q Consensus 277 ~~~~~~~aiiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~~~f~~~~~g 356 (429)
......+++||||++++||++++++|.+++++.... . ..+|..+|. ...+|+|+|+|++
T Consensus 328 -~~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~~--------~---~g~y~v~C~-----~~~~P~itf~fgg---- 386 (451)
T 3qvc_A 328 -SSKKANVILDSATSVITVPTEFFNQFVESASVFKVP--------F---LSLYVTTCG-----NTKLPTLEYRSPN---- 386 (451)
T ss_dssp -EEEEEEEEECTTBSSEEECHHHHHHHHTTTTCEECT--------T---SSCEEEETT-----CTTCCCEEEEETT----
T ss_pred -cCCCceEEEeCCCccccCCHHHHHHHHHHcCCeecC--------C---CCeEEeeCC-----cCcCCcEEEEECC----
Confidence 334678999999999999999999999998654320 0 113333443 2358999999976
Q ss_pred eEEEeCCCeEEEEeC--CCcEEEEEEcCCCCCCCCceeEcccceeceEEEEeCCCCEEEEecCC
Q 014185 357 VRLVVPPEAYLVISG--RKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 418 (429)
Q Consensus 357 ~~~~l~~~~y~~~~~--~~~~C~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~ 418 (429)
.+++||+++|+.+.. ++..|+..+...+.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 387 ~~i~lp~~~yi~~~~~~~~~~C~~~i~~~~~~-~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 387 KVYTLEPKQYLEPLENIFSALCMLNIVPIDLE-KNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp EEEEECHHHHEEECTTTSTTEEEECEEECCCS-TTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEEEcHHHheeecccCCCCeEEEEEEeCCCC-CCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 899999999999764 346897655444211 4689999999999999999999999999985
No 27
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=1.4e-53 Score=420.94 Aligned_cols=317 Identities=19% Similarity=0.281 Sum_probs=249.5
Q ss_pred CceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCCCCCCCCCCCCcCCCCccCCCcccccCCCCCCCCCCCCCCCCCe
Q 014185 65 LGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCD 144 (429)
Q Consensus 65 ~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~~C~~~~~~~y~~~~S~~~C~~~~C~~~~~~~t~~~~~~~~~~~ 144 (429)
...|+++|+||||+|+++|+|||||+++||+|. +| |. .++.|+|++| +|++. ..|.
T Consensus 27 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c--~~--~~~~y~~~~S---------------sT~~~----~~~~ 82 (402)
T 3vf3_A 27 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PH--PF--LHRYYQRQLS---------------STYRD----LRKG 82 (402)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CC--TT--CSCCCCGGGC---------------TTCEE----EEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCCceEEccC-CC--Cc--ccCCcCcccC---------------ccccc----CCCE
Confidence 458999999999999999999999999999998 77 43 6789999999 46664 6789
Q ss_pred eEeEeCCCCeEEEEEEEEEEEEeecCC-ccccc-ceEEeeeeecCCCCCCCCCCCceEEecCCC--------CCcHHHHH
Q 014185 145 YEIEYGDGGSSIGALVTDLFPLRFSNG-SVFNV-PLTFGCGYNQHNPGPLSPPDTAGVLGLGRG--------RISIVSQL 214 (429)
Q Consensus 145 ~~~~Y~~gs~~~G~~~~D~v~l~~~~g-~~~~~-~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~--------~~s~~~~l 214 (429)
|.+.|++| ++.|.+++|+|+| + +..+. .+.|+++......+ ......+||||||++ ..+++++|
T Consensus 83 ~~i~Yg~G-s~~G~~~~D~v~i----g~~~~~~~~~~~~~~~~~~~~~-~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L 156 (402)
T 3vf3_A 83 VYVPYTQG-KWEGELGTDLVSI----PHGPNVTVRANIAAITESDKFF-INGSNWEGILGLAYAEIARPDDSLEPFFDSL 156 (402)
T ss_dssp EEEECSSC-EEEEEEEEEEEEC----TTSCSCEEEEEEEEEEEEESCS-CTTCCCCEEEECSCGGGCSSCTTSCCHHHHH
T ss_pred EEEEECcE-EEEEEEEEEEEEE----CCccccceeeeEEEEEcccccc-ccCCCccceEEcCchhhcccCCcCCcHHHHH
Confidence 99999999 6899999999999 5 33333 24477776653221 123568999999985 35799999
Q ss_pred hhcCCccceEEEEeCC------------CCceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEEECCEEeccC
Q 014185 215 REYGLIRNVIGHCIGQ------------NGRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLK 280 (429)
Q Consensus 215 ~~~g~i~~~Fsl~l~~------------~~~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~ 280 (429)
++|+.|.++||+||.+ ...|.|+|| |++++.|+++|+|+... .+|.|.+++|+|+++.+...
T Consensus 157 ~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~w~v~l~~i~v~g~~~~~~ 232 (402)
T 3vf3_A 157 VKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE----WYYEVIIVRVEINGQDLKMD 232 (402)
T ss_dssp HHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSSB----TTBEECEEEEEETTEECCCC
T ss_pred HHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCcC----cEEEEEEeEEEECCEEeccc
Confidence 9999998899999962 347999999 77889999999999875 79999999999999987652
Q ss_pred -----CCcEEEecCCcceeecHHHHHHHHHHHHHHhcCCCCccCCCC---CCCCceecCCCcCcccccccCccEEEEEeC
Q 014185 281 -----DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDD---KTLPICWRGPFKALGQVTEYFKPLALSFTN 352 (429)
Q Consensus 281 -----~~~aiiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~---~~~~~C~~~~~~~~~~~~~~~P~i~~~f~~ 352 (429)
...++|||||++++||++++++|++++++... ....... .....|+.... ..+..+|+|+|+|++
T Consensus 233 ~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~---~~~~~~~~~~~~~~~C~~~~~----~~~~~~P~i~f~f~g 305 (402)
T 3vf3_A 233 CKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS---TEKFPDGFWLGEQLVCWQAGT----TPWNIFPVISLYLMG 305 (402)
T ss_dssp GGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTT---TSCCCTTGGGTCSCEEEETTC----CCGGGSCCEEEEEEC
T ss_pred ccccCCCeEEEECCCCcccCCHHHHHHHHHHHhhhcc---ccccCcccccccccccccccc----chHhhCCceEEEEec
Confidence 46899999999999999999999999998753 1111111 12346876421 123468999999998
Q ss_pred CC--CceEEEeCCCeEEEEeCCC----cEEEEEEcCCCCCCCCceeEcccceeceEEEEeCCCCEEEEecCCCCCcccc
Q 014185 353 RR--NSVRLVVPPEAYLVISGRK----NVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSL 425 (429)
Q Consensus 353 ~~--~g~~~~l~~~~y~~~~~~~----~~C~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~c~~~~~~ 425 (429)
.. ...+++|++++|+.+..+. ..|+++.... ..+.||||++|||++|+|||++++|||||+++|+..+++
T Consensus 306 ~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~---~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~ 381 (402)
T 3vf3_A 306 EVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQ---SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEF 381 (402)
T ss_dssp SSTTEEEEEEECHHHHEEECCCGGGTTEEEEEECEEE---ESSCEEECHHHHTTEEEEEEGGGTEEEEEEETTCCBCSS
T ss_pred CCCCceEEEEECHHHheehhccCCCCCceEEEEeccC---CCCcEEEChHHhCCeEEEEECCCCEEEEEecccCcccCc
Confidence 31 0136999999999976542 4898632211 135799999999999999999999999999999976654
No 28
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1.1e-53 Score=427.43 Aligned_cols=317 Identities=19% Similarity=0.276 Sum_probs=252.1
Q ss_pred CceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCCCCCCCCCCCCcCCCCccCCCcccccCCCCCCCCCCCCCCCCCe
Q 014185 65 LGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCD 144 (429)
Q Consensus 65 ~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~~C~~~~~~~y~~~~S~~~C~~~~C~~~~~~~t~~~~~~~~~~~ 144 (429)
+..|+++|+||||+|+++|+|||||+++||+|. +| |. .++.|+|++| +|++. ..|.
T Consensus 73 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~-~c--c~--~~~~y~~~~S---------------sT~~~----~~~~ 128 (455)
T 3lpj_A 73 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PH--PF--LHRYYQRQLS---------------STYRD----LRKG 128 (455)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CC--TT--CSCCCCGGGC---------------TTCEE----EEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEcCCCcceEEecc-cc--cc--cCCcccCCCC---------------CCccc----CCcc
Confidence 458999999999999999999999999999998 77 54 6789999999 46665 6789
Q ss_pred eEeEeCCCCeEEEEEEEEEEEEeecCCc-cccc-ceEEeeeeecCCCCCCCCCCCceEEecCCC--------CCcHHHHH
Q 014185 145 YEIEYGDGGSSIGALVTDLFPLRFSNGS-VFNV-PLTFGCGYNQHNPGPLSPPDTAGVLGLGRG--------RISIVSQL 214 (429)
Q Consensus 145 ~~~~Y~~gs~~~G~~~~D~v~l~~~~g~-~~~~-~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~--------~~s~~~~l 214 (429)
|.+.|++| ++.|.+++|+|+| ++ ..+. .+.|+++......+ ......+||||||++ ..+++++|
T Consensus 129 ~~i~Yg~G-s~~G~~~~Dtv~i----g~~~~~~~~~~~~~~~~~~~~~-~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L 202 (455)
T 3lpj_A 129 VYVPYTQG-KWEGELGTDLVSI----PHGPNVTVRANIAAITESDKFF-INGSNWEGILGLAYAEIARPDDSLEPFFDSL 202 (455)
T ss_dssp EEEECSSC-EEEEEEEEEEEEC----TTSCSCEEEEEEEEEEEEESCS-CTTCCCCEEEECSCGGGCSSCTTSCCHHHHH
T ss_pred EEEEeCCe-EEEEEEEEEEEEE----CCCcceeeEEEEEEEEccCccc-ccCCCcceEEEeCccccccccCCCCcHHHHH
Confidence 99999999 6799999999999 53 2222 35688887653322 123568999999985 35799999
Q ss_pred hhcCCccceEEEEeCC------------CCceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEEECCEEeccC
Q 014185 215 REYGLIRNVIGHCIGQ------------NGRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLK 280 (429)
Q Consensus 215 ~~~g~i~~~Fsl~l~~------------~~~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~ 280 (429)
++|+.|.++||+||.+ ...|.|+|| |..++.|+++|+|+... .+|.|.+++|.|+++.+...
T Consensus 203 ~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~w~v~l~~i~v~g~~~~~~ 278 (455)
T 3lpj_A 203 VKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE----WYYEVIIVRVEINGQDLKMD 278 (455)
T ss_dssp HHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB----TTBBCCEEEEEETTEECCCC
T ss_pred HHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCCC----ceeEEEEeEEEECCEEcccc
Confidence 9999998899999963 357999999 77889999999999875 79999999999999987652
Q ss_pred -----CCcEEEecCCcceeecHHHHHHHHHHHHHHhcCCCCccCCC---CCCCCceecCCCcCcccccccCccEEEEEeC
Q 014185 281 -----DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPD---DKTLPICWRGPFKALGQVTEYFKPLALSFTN 352 (429)
Q Consensus 281 -----~~~aiiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~~~~~P~i~~~f~~ 352 (429)
...+||||||++++||++++++|++++++.... ..... ......|+.... ..+..+|+|+|+|++
T Consensus 279 ~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~---~~~~~~~~~g~~~~C~~~~~----~~~~~~P~i~f~f~g 351 (455)
T 3lpj_A 279 CKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASST---EKFPDGFWLGEQLVCWQAGT----TPWNIFPVISLYLMG 351 (455)
T ss_dssp GGGGGSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTT---SCCCHHHHTTCSCEEESTTC----CCGGGSCCEEEEEEC
T ss_pred ccccCCCeEEEECCCcceeCCHHHHHHHHHHhhhhccc---cccCcccccCcceecccccC----CchhcCCcEEEEEcC
Confidence 468999999999999999999999999987531 11111 112345876421 123468999999998
Q ss_pred CCC--ceEEEeCCCeEEEEeCCC----cEEEEEEcCCCCCCCCceeEcccceeceEEEEeCCCCEEEEecCCCCCcccc
Q 014185 353 RRN--SVRLVVPPEAYLVISGRK----NVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSL 425 (429)
Q Consensus 353 ~~~--g~~~~l~~~~y~~~~~~~----~~C~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~c~~~~~~ 425 (429)
... ..+++|++++|+.+..+. ..|+++.... ..+.||||++|||++|+|||++++|||||+++|+..+++
T Consensus 352 ~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~---~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~ 427 (455)
T 3lpj_A 352 EVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQ---SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEF 427 (455)
T ss_dssp SSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEE---ESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCCSS
T ss_pred CCcCceEEEEECHHHheEeccCCCCCCceEEEEeccC---CCCcEEEChHHhCCeEEEEECCCCEEEEEeccccccccc
Confidence 310 126999999999976543 4898732211 235799999999999999999999999999999887644
No 29
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=7e-55 Score=418.49 Aligned_cols=306 Identities=13% Similarity=0.170 Sum_probs=248.4
Q ss_pred EEeeccCCCCCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCC--CCCCCCCCCCcCCCCccCCCcccccCCCCCC
Q 014185 55 FLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT--GCTKPPEKQYKPHKNIVPCSNPRCAALHWPN 132 (429)
Q Consensus 55 ~~p~~~~~~~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~--~C~~~~~~~y~~~~S~~~C~~~~C~~~~~~~ 132 (429)
..|+. .+.+..|+++|+|| +|++.|+|||||+++||+|. +|. .|.+..++.|+|++|
T Consensus 8 ~~~l~--n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~~~~~~~y~~~~S---------------- 66 (330)
T 1yg9_A 8 YKLVH--VFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQ-ECVGGACVCPNLQKYEKLKP---------------- 66 (330)
T ss_dssp CSCEE--EEECTTSEEEEEET--TEEEEEEEETTCCCEEEECT-TCCSGGGGSTTCCCCCCSSC----------------
T ss_pred Eeeee--cCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecC-CCCCccCcccccCccCCCCC----------------
Confidence 34555 23466899999999 99999999999999999999 896 684347899999887
Q ss_pred CCCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCcccccceEEeeeeecCCCCCCCCCCCceEEecCCCCCc---
Q 014185 133 PPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRIS--- 209 (429)
Q Consensus 133 t~~~~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~~s--- 209 (429)
|++. .++.|.+.|++| ++.|.+++|+|+| ++.+++++.|||++..... +.....+||||||++..+
T Consensus 67 T~~~----~~~~~~i~Yg~G-s~~G~~~~Dtv~i----g~~~~~~~~fg~~~~~~~~--f~~~~~~GilGLg~~~~s~~~ 135 (330)
T 1yg9_A 67 KYIS----DGNVQVKFFDTG-SAVGRGIEDSLTI----SQLTTSQQDIVLADELSQE--VCILSADVVVGIAAPGCPNAL 135 (330)
T ss_dssp EEEE----EEEEEEEETTTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEECTH--HHHTTCSEEEECSCTTSCCTT
T ss_pred ceEE----CCCEEEEEECCc-eEEEEEEEEEEEE----CCEEEcCeEEEEEEEcccc--cccccCceEEEcCcchhcccc
Confidence 3332 466899999999 6799999999999 8889999999999987211 112468999999997654
Q ss_pred ----HHHHHhhcCCccceEEEEeCCC--C--ceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEEECCEEecc
Q 014185 210 ----IVSQLREYGLIRNVIGHCIGQN--G--RGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGL 279 (429)
Q Consensus 210 ----~~~~l~~~g~i~~~Fsl~l~~~--~--~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~ 279 (429)
++++|++||+|+++||+||.+. . .|.|+|| |++++.|+++|+|+... .+|.|.+++|+|+++.+..
T Consensus 136 ~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~w~v~l~~i~v~~~~~~~ 211 (330)
T 1yg9_A 136 KGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGD----DSWKFRLDGVKIGDTTVAP 211 (330)
T ss_dssp SCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCT----TSCCEECSEEEETTEEEEC
T ss_pred CCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCCC----CEEEEEeCeEEECCEEEcC
Confidence 9999999998899999999864 2 7999999 67788999999999854 8999999999999988765
Q ss_pred CCCcEEEecCCcceeecHHHHHHHHHHHHHHhcCCCCccCCCCCCCCcee-cCCCcCcccccccCccEEEEEeCCCCceE
Q 014185 280 KDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICW-RGPFKALGQVTEYFKPLALSFTNRRNSVR 358 (429)
Q Consensus 280 ~~~~aiiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~-~~~~~~~~~~~~~~P~i~~~f~~~~~g~~ 358 (429)
.+..+||||||++++||++++++|.+++++... . .. +..| ..+|.. ...+|+|+|+|++ .+
T Consensus 212 ~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~-----~--~g---~~~~~~~~C~~----~~~~p~i~f~fgg----~~ 273 (330)
T 1yg9_A 212 AGTQAIIDTSKAIIVGPKAYVNPINEAIGCVVE-----K--TT---TRRICKLDCSK----IPSLPDVTFVING----RN 273 (330)
T ss_dssp TTCEEEECTTCSSEEEEHHHHHHHHHHHTCEEE-----E--CS---SCEEEEECGGG----GGGSCCEEEEETT----EE
T ss_pred CCcEEEEecCCccccCCHHHHHHHHHHhCCccc-----C--CC---ceEEEEEECCC----ccccCcEEEEECC----EE
Confidence 568999999999999999999999999965432 0 01 0012 223322 2358999999954 99
Q ss_pred EEeCCCeEEEEeCCCcEEEEEEcCCCCCCCCceeEcccceeceEEEEeCCCCEEEEecCC
Q 014185 359 LVVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 418 (429)
Q Consensus 359 ~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~ 418 (429)
++|++++|+++. +..|+..+.... ..+.||||++|||++|+|||++++|||||+++
T Consensus 274 ~~l~~~~y~~~~--~~~C~~~i~~~~--~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 274 FNISSQYYIQQN--GNLCYSGFQPCG--HSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp EEECHHHHEEEE--TTEEEESEEEET--TCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEECHHHhcccC--CCcEEEEEEeCC--CCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 999999999976 567985544321 24589999999999999999999999999874
No 30
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.6e-53 Score=417.99 Aligned_cols=312 Identities=21% Similarity=0.358 Sum_probs=245.3
Q ss_pred CceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCCCCCCCCCCCCcCCCCccCCCcccccCCCCCCCCCCCCCCCCCe
Q 014185 65 LGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCD 144 (429)
Q Consensus 65 ~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~~C~~~~~~~y~~~~S~~~C~~~~C~~~~~~~t~~~~~~~~~~~ 144 (429)
+..|+++|+||||+|++.|+|||||+++||+|. +|..| ++.|+|++| +|++. ..|.
T Consensus 12 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c~~~----~~~f~~~~S---------------sT~~~----~~~~ 67 (383)
T 2ewy_A 12 GRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGT-PHSYI----DTYFDTERS---------------STYRS----KGFD 67 (383)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CBTTB----SCCCCGGGC---------------TTCEE----EEEE
T ss_pred CCcEEEEEEecCCCceEEEEEecCCCceEEecC-CCCcc----ccCcccccC---------------cccee----CCce
Confidence 457999999999999999999999999999998 77655 578999998 46664 5789
Q ss_pred eEeEeCCCCeEEEEEEEEEEEEeecCCcccc--cceEEeeeeecCCCCCCCCCCCceEEecCCCC--------CcHHHHH
Q 014185 145 YEIEYGDGGSSIGALVTDLFPLRFSNGSVFN--VPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR--------ISIVSQL 214 (429)
Q Consensus 145 ~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~--~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~--------~s~~~~l 214 (429)
|.+.|++| ++.|.+++|+|+| ++... ..+.|+++...... .......+||||||++. .+++++|
T Consensus 68 ~~i~Yg~G-s~~G~~~~Dtv~i----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l 141 (383)
T 2ewy_A 68 VTVKYTQG-SWTGFVGEDLVTI----PKGFNTSFLVNIATIFESENF-FLPGIKWNGILGLAYATLAKPSSSLETFFDSL 141 (383)
T ss_dssp EEEECSSC-EEEEEEEEEEEEE----TTTEEEEEEEEEEEEEEEESC-SCTTCCCCEEEECSCGGGCSSCTTSCCHHHHH
T ss_pred EEEEECCc-EEEEEEEEEEEEE----CCCccceeEEEEEEEEeecce-eeccCcCceEEecCchhcccccccccCHHHHH
Confidence 99999999 6899999999999 54222 23567877654222 11224689999999854 4689999
Q ss_pred hhcCCccceEEEEeCC---------CCceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEEECCEEeccC---
Q 014185 215 REYGLIRNVIGHCIGQ---------NGRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLK--- 280 (429)
Q Consensus 215 ~~~g~i~~~Fsl~l~~---------~~~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~--- 280 (429)
++|+.++++||+||++ ...|.|+|| |.+++.|+++|+|+... .+|.|.+++|+|+++.+..+
T Consensus 142 ~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g~~~~~~~~~ 217 (383)
T 2ewy_A 142 VTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEE----WYYQIEILKLEIGGQSLNLDCRE 217 (383)
T ss_dssp HHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSSB----TTBBCCEEEEEETTEECCCCTTT
T ss_pred HHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCCC----ceEEEEEEEEEECCEEccccccc
Confidence 9999888899999952 357999999 67889999999999875 79999999999999987542
Q ss_pred --CCcEEEecCCcceeecHHHHHHHHHHHHHHhcCCCCccCCCC---CCCCceecCCCcCcccccccCccEEEEEeCCC-
Q 014185 281 --DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDD---KTLPICWRGPFKALGQVTEYFKPLALSFTNRR- 354 (429)
Q Consensus 281 --~~~aiiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~---~~~~~C~~~~~~~~~~~~~~~P~i~~~f~~~~- 354 (429)
...+||||||++++||++++++|++++.+... ....+.. .....|+..+. .....+|+|+|+|+++.
T Consensus 218 ~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~---~~~~~~~~~~~~~~~C~~~~~----~~~~~~P~i~f~f~g~~~ 290 (383)
T 2ewy_A 218 YNADKAIVDSGTTLLRLPQKVFDAVVEAVARASL---IPEFSDGFWTGSQLACWTNSE----TPWSYFPKISIYLRDENS 290 (383)
T ss_dssp TTSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTC---SSCCCHHHHHTSEEEEECSSS----CGGGGSCCEEEEEECSST
T ss_pred cCCccEEEEcCCccccCCHHHHHHHHHHHhhhcc---cccCccccccccccccccCCc----ccHhhCCcEEEEECCCCC
Confidence 36899999999999999999999999988653 1111110 11235876421 12346899999999831
Q ss_pred -CceEEEeCCCeEEEEeC---CCcEEEEE-EcCCCCCCCCceeEcccceeceEEEEeCCCCEEEEecCCCCC
Q 014185 355 -NSVRLVVPPEAYLVISG---RKNVCLGI-LNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNT 421 (429)
Q Consensus 355 -~g~~~~l~~~~y~~~~~---~~~~C~~~-~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~c~~ 421 (429)
.+.+++|++++|+.+.. ++..|+++ +... .+.||||++|||++|+|||++++|||||+++|+.
T Consensus 291 ~~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~----~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 358 (383)
T 2ewy_A 291 SRSFRITILPQLYIQPMMGAGLNYECYRFGISPS----TNALVIGATVMEGFYVIFDRAQKRVGFAASPCAE 358 (383)
T ss_dssp TEEEEEEECHHHHEEEECCCTTCSEEEEESEEEE----SSCEEECHHHHTTEEEEEETTTTEEEEEECTTCB
T ss_pred CceEEEEEChHHheeecccCCCCceeEEEEecCC----CCcEEEChHHhCCeeEEEECCCCeEEEEeccCCC
Confidence 02489999999998763 35689863 2222 3579999999999999999999999999999975
No 31
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=9.5e-55 Score=416.50 Aligned_cols=297 Identities=17% Similarity=0.297 Sum_probs=242.4
Q ss_pred CceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCCCCCCCCCCCCcCCCCccCCCcccccCCCCCCCCCCCCCCCCCe
Q 014185 65 LGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCD 144 (429)
Q Consensus 65 ~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~~C~~~~~~~y~~~~S~~~C~~~~C~~~~~~~t~~~~~~~~~~~ 144 (429)
+..|+++|+|| +|++.|+|||||+++||+|. +|..|.++.++.|+|++| +++. +.|.
T Consensus 14 ~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~S----------------s~~~----~~~~ 70 (323)
T 1bxo_A 14 DEEYITPVTIG--GTTLNLNFDTGSADLWVFST-ELPASQQSGHSVYNPSAT----------------GKEL----SGYT 70 (323)
T ss_dssp GSCEEEEEEET--TEEEEEEEETTCCCEEECBT-TSCHHHHTTSCCBCHHHH----------------CEEE----EEEE
T ss_pred CCEEEEEEEEC--CEEEEEEEeCCCcceEEecC-CCCchhccCCCCCCcccC----------------Cccc----CCCe
Confidence 55899999999 99999999999999999999 898887778999999888 3221 5689
Q ss_pred eEeEeCCCCeEEEEEEEEEEEEeecCCcccccceEEeeeeecCCCCCCCCCCCceEEecCCCC---------CcHHHHHh
Q 014185 145 YEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR---------ISIVSQLR 215 (429)
Q Consensus 145 ~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~---------~s~~~~l~ 215 (429)
|.+.|++|+.+.|.+++|+|+| ++.+++++.|||++.....+ ......+||||||++. .+++++|+
T Consensus 71 ~~i~Yg~Gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~~-~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~ 145 (323)
T 1bxo_A 71 WSISYGDGSSASGNVFTDSVTV----GGVTAHGQAVQAAQQISAQF-QQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVK 145 (323)
T ss_dssp EEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHH-HTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHG
T ss_pred EEEEeCCCCeEEEEEEEEEEEE----CCEEECcEEEEEEEecCccc-ccCCCCceEEEeCcccccccccCCCCCHHHHHH
Confidence 9999999977999999999999 88899999999999863321 1114689999999953 46899999
Q ss_pred hcCCc-cceEEEEeCCCCceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEEECCEEeccCCCcEEEecCCcc
Q 014185 216 EYGLI-RNVIGHCIGQNGRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASY 292 (429)
Q Consensus 216 ~~g~i-~~~Fsl~l~~~~~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGt~~ 292 (429)
++ | +++||+||.++..|.|+|| |++++.|+++|+|+.... .+|.|.+++|+|++ +...+..+||||||++
T Consensus 146 ~~--i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~---~~w~v~l~~i~v~~--~~~~~~~aiiDSGTs~ 218 (323)
T 1bxo_A 146 SS--LAQPLFAVALKHQQPGVYDFGFIDSSKYTGSLTYTGVDNSQ---GFWSFNVDSYTAGS--QSGDGFSGIADTGTTL 218 (323)
T ss_dssp GG--BSSSEEEEECCSSSCEEEEESSCCGGGBSSCCEEEECBCTT---SSCEEEEEEEEETT--EEEEEEEEEECTTCSS
T ss_pred Hh--cCCcEEEEEEeCCCCceEEEeCcChhhccCceEEEECCCCC---CeEEEEEeeEEECC--ccCCCceEEEeCCCCc
Confidence 87 7 9999999998778999999 677899999999998543 79999999999999 3334578999999999
Q ss_pred eeecHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceecCCCcCcccccccCccEEEEEeCCCCceEEEeCCCeEEEEeCC
Q 014185 293 AYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGR 372 (429)
Q Consensus 293 ~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~~~f~~~~~g~~~~l~~~~y~~~~~~ 372 (429)
++||++++++|++++.+.... ........ .|+ ..+|+|+|+|++ .+++||+++|+++..+
T Consensus 219 ~~lP~~~~~~l~~~i~~a~~~----~~~g~~~~-~C~-----------~~~P~i~f~fgg----~~~~l~~~~~~~~~~~ 278 (323)
T 1bxo_A 219 LLLDDSVVSQYYSQVSGAQQD----SNAGGYVF-DCS-----------TNLPDFSVSISG----YTATVPGSLINYGPSG 278 (323)
T ss_dssp EEECHHHHHHHHTTSTTCEEE----TTTTEEEE-CTT-----------CCCCCEEEEETT----EEEEECHHHHEEEECS
T ss_pred eeCCHHHHHHHHHhCCCceEc----CcCCEEEE-ECC-----------CCCceEEEEECC----EEEEECHHHeEEeccC
Confidence 999999999999988432210 00001111 143 248999999954 8999999999987643
Q ss_pred -CcEEEEEEcCCCCCCCCceeEcccceeceEEEEeCCCCEEEEecCC
Q 014185 373 -KNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 418 (429)
Q Consensus 373 -~~~C~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~ 418 (429)
+..|++.+...+ ..+.||||++|||++|+|||++++|||||+++
T Consensus 279 ~~~~C~~~i~~~~--~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 279 DGSTCLGGIQSNS--GIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp SSSCEEESEEECT--TCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCCeEEEEEECCC--CCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 368987554332 24689999999999999999999999999864
No 32
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=2.4e-53 Score=418.08 Aligned_cols=315 Identities=20% Similarity=0.292 Sum_probs=247.1
Q ss_pred CceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCCCCCCCCCCCCcCCCCccCCCcccccCCCCCCCCCCCCCCCCCe
Q 014185 65 LGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCD 144 (429)
Q Consensus 65 ~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~~C~~~~~~~y~~~~S~~~C~~~~C~~~~~~~t~~~~~~~~~~~ 144 (429)
+..|+++|+||||+|++.|+|||||+++||+|. +|..| ++.|+|++| +|++. ..|.
T Consensus 20 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~c~~~----~~~y~~~~S---------------sT~~~----~~~~ 75 (395)
T 2qp8_A 20 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PHPFL----HRYYQRQLS---------------STYRD----LRKG 75 (395)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CCTTC----SCCCCGGGC---------------TTCEE----EEEE
T ss_pred CceEEEEEEecCCCceEEEEEecCCCceEEECC-CCccc----cCCcCcccC---------------CCcee----CCce
Confidence 557999999999999999999999999999998 77544 578999998 46654 5789
Q ss_pred eEeEeCCCCeEEEEEEEEEEEEeecCC-ccccc-ceEEeeeeecCCCCCCCCCCCceEEecCCCC--------CcHHHHH
Q 014185 145 YEIEYGDGGSSIGALVTDLFPLRFSNG-SVFNV-PLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR--------ISIVSQL 214 (429)
Q Consensus 145 ~~~~Y~~gs~~~G~~~~D~v~l~~~~g-~~~~~-~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~--------~s~~~~l 214 (429)
|.+.|++| ++.|.+++|+|+| + +..+. .+.|++.......+ ......+||||||++. .+++++|
T Consensus 76 ~~i~Yg~G-s~~G~~~~Dtv~i----g~g~~~~~~~~~~~~~~~~~~f-~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l 149 (395)
T 2qp8_A 76 VYVPYTQG-KWEGELGTDLVSI----PHGPNVTVRANIAAITESDKFF-INGSNWEGILGLAYAEIARPDDSLEPFFDSL 149 (395)
T ss_dssp EEEECSSC-EEEEEEEEEEEEC----TTSCSCEEEEEEEEEEEEESCS-CTTCCCCEEEECSCGGGCSSCTTSCCHHHHH
T ss_pred EEEEECCc-EEEEEEEeEEEEE----CCCCCceEEEEEEEEEccCccc-ccccCccceEEcCchhhccCCCCCCCHHHHH
Confidence 99999999 6799999999999 5 34333 35677776542221 1125689999999854 4689999
Q ss_pred hhcCCccceEEEEeCC------------CCceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEEECCEEeccC
Q 014185 215 REYGLIRNVIGHCIGQ------------NGRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLK 280 (429)
Q Consensus 215 ~~~g~i~~~Fsl~l~~------------~~~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~ 280 (429)
++|+.|.++||+||.+ ...|.|+|| |.+++.|++.|+|+... .+|.|.+++|+|+++.+..+
T Consensus 150 ~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g~~~~~~ 225 (395)
T 2qp8_A 150 VKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE----WYYEVIIVRVEINGQDLKMD 225 (395)
T ss_dssp HHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB----TTBBCCEEEEEETTEECCCC
T ss_pred HHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCCC----ceEEEEEEEEEECCEEcccC
Confidence 9999998899999974 257999999 66788999999999875 79999999999999987542
Q ss_pred -----CCcEEEecCCcceeecHHHHHHHHHHHHHHhcCCCCccCCC---CCCCCceecCCCcCcccccccCccEEEEEeC
Q 014185 281 -----DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPD---DKTLPICWRGPFKALGQVTEYFKPLALSFTN 352 (429)
Q Consensus 281 -----~~~aiiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~~~~~P~i~~~f~~ 352 (429)
...+||||||++++||++++++|.+++.+..... ..+. ......|+..+. .....+|+|+|+|++
T Consensus 226 ~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~---~~~~~~~~~~~~~C~~~~~----~~~~~~P~i~f~f~g 298 (395)
T 2qp8_A 226 CKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTE---KFPDGFWLGEQLVCWQAGT----TPWNIFPVISLYLMG 298 (395)
T ss_dssp GGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTS---CCCHHHHTTCSCEEESTTC----CCGGGSCCEEEEEEC
T ss_pred ccccCCceEEEEcCCCcEecCHHHHHHHHHHHhhhcccc---cCCcccccccccccccccc----chHhhCCcEEEEEcc
Confidence 3689999999999999999999999998875411 1100 011235876421 123468999999998
Q ss_pred CCC--ceEEEeCCCeEEEEeCC----CcEEEEE-EcCCCCCCCCceeEcccceeceEEEEeCCCCEEEEecCCCCCccc
Q 014185 353 RRN--SVRLVVPPEAYLVISGR----KNVCLGI-LNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLS 424 (429)
Q Consensus 353 ~~~--g~~~~l~~~~y~~~~~~----~~~C~~~-~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~c~~~~~ 424 (429)
+.. ..+++|+|++|+.+..+ ...|+++ +... .+.||||++|||++|+|||++++|||||+++|+..++
T Consensus 299 ~~~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~----~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~ 373 (395)
T 2qp8_A 299 EVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS----STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDE 373 (395)
T ss_dssp SSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEE----SSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCCS
T ss_pred CCCCceEEEEECHHHhEeecccCCCCCceEEEEEecCC----CCcEEEChHHhCCeeEEEECCCCEEEEEeccCCCCCC
Confidence 310 13799999999987643 3489742 2222 3579999999999999999999999999999996443
No 33
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=2.6e-52 Score=402.76 Aligned_cols=303 Identities=20% Similarity=0.276 Sum_probs=240.7
Q ss_pred EEeeccCCCCCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCCCCCCCCCCCCcCCCCccCCCcccccCCCCCCCC
Q 014185 55 FLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPP 134 (429)
Q Consensus 55 ~~p~~~~~~~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~~C~~~~~~~y~~~~S~~~C~~~~C~~~~~~~t~ 134 (429)
.+|+... +..|+++|.||||+|++.|+|||||+++||+|. +.|+|++| +.
T Consensus 4 ~~~l~n~---~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-----------~~y~~s~S----------------s~ 53 (340)
T 1wkr_A 4 SVPATNQ---LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-----------KSYVKTST----------------SS 53 (340)
T ss_dssp EEEEEEC---SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-----------SCCCCCTT----------------CE
T ss_pred cEeeecc---CcEEEEEEEECCCCcEEEEEEeCCChhheecCC-----------CccCCcCC----------------cc
Confidence 4567632 358999999999999999999999999999764 46888777 21
Q ss_pred CCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCcccccceEEeeeeecCCCCCCCCCCCceEEecCCCC-------
Q 014185 135 RCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR------- 207 (429)
Q Consensus 135 ~~~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~------- 207 (429)
. ..|.|.+.|++| ++.|.+++|+|+| ++.+++++.|||++...+ + ...+||||||++.
T Consensus 54 ~-----~~~~~~i~Yg~G-s~~G~~~~Dtv~~----g~~~v~~~~fg~~~~~~~---~--~~~~GilGLg~~~~s~~~~~ 118 (340)
T 1wkr_A 54 A-----TSDKVSVTYGSG-SFSGTEYTDTVTL----GSLTIPKQSIGVASRDSG---F--DGVDGILGVGPVDLTVGTLS 118 (340)
T ss_dssp E-----EEEEEEEECSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEEES---C--TTCSEEEECSCGGGGTTSEE
T ss_pred c-----cCceEEEEECCc-EEEEEEEEEEEEE----CCEEEcceEEEEEEccCC---C--cCCCcEEECCcccccccccc
Confidence 1 567999999999 5999999999999 889999999999998632 2 3689999999854
Q ss_pred -------CcHHHHHhhcCCc-cceEEEEeCCC-----CceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEEE
Q 014185 208 -------ISIVSQLREYGLI-RNVIGHCIGQN-----GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLY 272 (429)
Q Consensus 208 -------~s~~~~l~~~g~i-~~~Fsl~l~~~-----~~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v 272 (429)
.+++++|++||+| +++||+||.+. ..|.|+|| |++++.|++.|+|+........+|.|. ++|+|
T Consensus 119 ~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v 197 (340)
T 1wkr_A 119 PHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRY 197 (340)
T ss_dssp SCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEE
T ss_pred ccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEE
Confidence 3679999999999 99999999852 47999999 677899999999999853223799999 99999
Q ss_pred CC-EEeccCCCcEEEecCCcceeecHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceecCCCcCcccccccCccEEEEEe
Q 014185 273 SG-KSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFT 351 (429)
Q Consensus 273 ~~-~~~~~~~~~aiiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~~~f~ 351 (429)
++ +.+.. +..+||||||++++||++++++|.+++++.... ... +|..+|.. ...+|+|+|+|+
T Consensus 198 ~~~~~l~~-~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~~------~~g-----~~~~~C~~----~~~~p~i~f~f~ 261 (340)
T 1wkr_A 198 GSSTSILS-STAGIVDTGTTLTLIASDAFAKYKKATGAVADN------NTG-----LLRLTTAQ----YANLQSLFFTIG 261 (340)
T ss_dssp TTTEEEEE-EEEEEECTTBCSEEECHHHHHHHHHHHTCEECT------TTS-----SEEECHHH----HHTCCCEEEEET
T ss_pred CCCeEccC-CCeEEEeCCcccccCCHHHHHHHHHhhCCEEcC------CCC-----eEEeeccc----cccCCcEEEEEC
Confidence 98 77753 468999999999999999999998888654320 001 22223321 135799999997
Q ss_pred CCCCceEEEeCCCeEEEEeC-------CCcEEE-EEEcCCCC-CCCCceeEcccceeceEEEEeCCCCEEEEecCCCCCc
Q 014185 352 NRRNSVRLVVPPEAYLVISG-------RKNVCL-GILNGSEA-EVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTL 422 (429)
Q Consensus 352 ~~~~g~~~~l~~~~y~~~~~-------~~~~C~-~~~~~~~~-~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~c~~~ 422 (429)
+ .+++|+|++|+++.. +...|+ ++...... +.+..||||++|||++|+|||++++|||||+++|++.
T Consensus 262 g----~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~ 337 (340)
T 1wkr_A 262 G----QTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTTA 337 (340)
T ss_dssp T----EEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTTC
T ss_pred C----EEEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCCCC
Confidence 6 899999999997542 124574 44432211 1234699999999999999999999999999999975
Q ss_pred c
Q 014185 423 L 423 (429)
Q Consensus 423 ~ 423 (429)
+
T Consensus 338 ~ 338 (340)
T 1wkr_A 338 T 338 (340)
T ss_dssp C
T ss_pred C
Confidence 4
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=1.1e-42 Score=318.21 Aligned_cols=221 Identities=22% Similarity=0.327 Sum_probs=188.8
Q ss_pred EEeeccCCCCCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCC---CCCCCCCCCCcCCCCccCCCcccccCCCCC
Q 014185 55 FLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT---GCTKPPEKQYKPHKNIVPCSNPRCAALHWP 131 (429)
Q Consensus 55 ~~p~~~~~~~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~---~C~~~~~~~y~~~~S~~~C~~~~C~~~~~~ 131 (429)
.+||.. +.+..|+++|.||||+|++.|+|||||+++||+|. +|. .|. .++.|+|++|
T Consensus 4 ~~~l~n--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~~C~--~~~~y~~~~S--------------- 63 (239)
T 1b5f_A 4 VVALTN--DRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSS-KCINSKACR--AHSMYESSDS--------------- 63 (239)
T ss_dssp EEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSCHHHH--TSCCBCGGGC---------------
T ss_pred eeeeee--cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcC-CCCCCcccC--CCCCCCCccC---------------
Confidence 456663 45779999999999999999999999999999998 886 565 5789999988
Q ss_pred CCCCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCcccccceEEeeeeecCCCCCCCCCCCceEEecCCCCCc--
Q 014185 132 NPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRIS-- 209 (429)
Q Consensus 132 ~t~~~~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~~s-- 209 (429)
+|++. ..|.|.+.|++| ++.|.+++|+|+| ++..++++.|||+...... .+.....+||||||++..+
T Consensus 64 sT~~~----~~~~~~i~Yg~G-s~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~~~-~f~~~~~~GilGLg~~~~s~p 133 (239)
T 1b5f_A 64 STYKE----NGTFGAIIYGTG-SITGFFSQDSVTI----GDLVVKEQDFIEATDEADN-VFLHRLFDGILGLSFQTISVP 133 (239)
T ss_dssp TTCEE----EEEEEEEECSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHH-HHTTCSCCEEEECSCCSSSCC
T ss_pred CCeee----CCcEEEEEECCC-cEEEEEEEEEEEE----CCcEEccEEEEEEEeccCc-cccccCcceEEecCccccccH
Confidence 35553 567899999999 6899999999999 8888999999999875321 1112568999999998754
Q ss_pred HHHHHhhcCCc-cceEEEEeCCC----CceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEEECCEEecc--C
Q 014185 210 IVSQLREYGLI-RNVIGHCIGQN----GRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGL--K 280 (429)
Q Consensus 210 ~~~~l~~~g~i-~~~Fsl~l~~~----~~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~--~ 280 (429)
++.+|++||+| +++||+||.+. ..|.|+|| |++++.|++.|+|+... .+|.|.+++|.|+++.+.. .
T Consensus 134 ~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~~~~~ 209 (239)
T 1b5f_A 134 VWYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQ----YYWQFGIGDVLIGDKSTGFCAP 209 (239)
T ss_dssp HHHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEEE----TTEEEEECCEEETTEECCTTTT
T ss_pred HHHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcccC----CeEEEEeeEEEECCEEecccCC
Confidence 78899999999 99999999853 57999999 67788899999999875 7999999999999988753 3
Q ss_pred CCcEEEecCCcceeecHHHHHHHHHHHHH
Q 014185 281 DLTLIFDSGASYAYFTSRVYQEIVSLIMR 309 (429)
Q Consensus 281 ~~~aiiDSGt~~~~lp~~~~~~l~~~i~~ 309 (429)
...+||||||++++||++++++|.+++++
T Consensus 210 ~~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 210 GCQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp CEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred CCEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 56899999999999999999999998864
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=8.1e-38 Score=286.81 Aligned_cols=223 Identities=17% Similarity=0.315 Sum_probs=177.0
Q ss_pred CcccccceEEeeeeecCCCCCCCCCCCceEEecCCCC------CcHHHHHhhcCCc-cceEEEEeCCCC----ceeEEeC
Q 014185 171 GSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR------ISIVSQLREYGLI-RNVIGHCIGQNG----RGVLFLG 239 (429)
Q Consensus 171 g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~------~s~~~~l~~~g~i-~~~Fsl~l~~~~----~G~l~~G 239 (429)
|+++++++.|||++...+. .+.....+||||||++. .+++++|++||.| +++||+||.+.. .|.|+||
T Consensus 1 gg~~v~~~~Fg~~~~~~~~-~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fG 79 (241)
T 1lya_B 1 GGVKVERQVFGEATKQPGI-TFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLG 79 (241)
T ss_dssp CCEEEEEEEEEEEEECCSS-TTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEET
T ss_pred CCeEECCeEEEEEEEccCC-ccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEEC
Confidence 3567889999999987432 23335789999999964 4689999999999 999999998642 7999999
Q ss_pred --CCCCCCCCcEEeecccCCCCCCCEEeeecEEEECCEEe-ccCCCcEEEecCCcceeecHHHHHHHHHHHHHHhcCCCC
Q 014185 240 --DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSC-GLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPL 316 (429)
Q Consensus 240 --d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~-~~~~~~aiiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~ 316 (429)
|++++.|+++|+|+... .+|.|.+++|+++++.+ ...+..+++||||++++||++++++|.+++++...
T Consensus 80 g~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~---- 151 (241)
T 1lya_B 80 GTDSKYYKGSLSYLNVTRK----AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPL---- 151 (241)
T ss_dssp SCCGGGEEEEEEEEECSSB----TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEE----
T ss_pred CcCHHHcCCceEEEECccc----cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHHHHHHHHHhCCeec----
Confidence 67788999999999865 89999999999999764 33567899999999999999999999999865432
Q ss_pred ccCCCCCCCCceecCCCcCcccccccCccEEEEEeCCCCceEEEeCCCeEEEEeCC--CcEEEE-EEcCCCC-CCCCcee
Q 014185 317 KLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGR--KNVCLG-ILNGSEA-EVGENNI 392 (429)
Q Consensus 317 ~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~~~f~~~~~g~~~~l~~~~y~~~~~~--~~~C~~-~~~~~~~-~~~~~~i 392 (429)
. .....-.|+. ...+|+|+|+|++ .+++|++++|+++..+ +..|+. +...... +..+.||
T Consensus 152 -~--~g~~~~~C~~---------~~~~p~i~f~f~g----~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~i 215 (241)
T 1lya_B 152 -I--QGEYMIPCEK---------VSTLPAITLKLGG----KGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWI 215 (241)
T ss_dssp -E--TTEEEEEGGG---------GGGSCCEEEEETT----EEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEE
T ss_pred -c--CCcEEEECCC---------CccCCeEEEEECC----EEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEE
Confidence 0 1111112533 1358999999954 8999999999997653 468986 4433211 1246899
Q ss_pred EcccceeceEEEEeCCCCEEEEecCC
Q 014185 393 IGEIFMQDKMVIYDNEKQRIGWKPED 418 (429)
Q Consensus 393 lG~~fl~~~y~vfD~~~~~iGfa~~~ 418 (429)
||++|||++|+|||++++|||||+++
T Consensus 216 lG~~fl~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 216 LGDVFIGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp ECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred echHHhcceEEEEECCCCEEEEEEcC
Confidence 99999999999999999999999874
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.85 E-value=1.5e-21 Score=150.87 Aligned_cols=87 Identities=28% Similarity=0.467 Sum_probs=75.6
Q ss_pred EEeeccCCCCCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCC----CCCCCCCCCCcCCCCccCCCcccccCCCC
Q 014185 55 FLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT----GCTKPPEKQYKPHKNIVPCSNPRCAALHW 130 (429)
Q Consensus 55 ~~p~~~~~~~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~----~C~~~~~~~y~~~~S~~~C~~~~C~~~~~ 130 (429)
..||. .+.+..|+++|.||||+|++.|+|||||+++||+|. +|. .|. .++.|+|++|
T Consensus 4 ~~~l~--n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~~C~--~~~~y~p~~S-------------- 64 (97)
T 1lya_A 4 PEVLK--NYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSI-HCKLLDIACW--IHHKYNSDKS-------------- 64 (97)
T ss_dssp EEEEE--EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCTTCHHHH--TSCCBCGGGC--------------
T ss_pred eEeeE--ECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEc-CccCcccccC--CCCCCCchhC--------------
Confidence 46665 235678999999999999999999999999999998 886 576 5789999998
Q ss_pred CCCCCCCCCCCCCeeEeEeCCCCeEEEEEEEEEEEE
Q 014185 131 PNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPL 166 (429)
Q Consensus 131 ~~t~~~~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~l 166 (429)
+|++. ..|.|.+.|++| ++.|.+++|+|+|
T Consensus 65 -sT~~~----~~~~~~i~Yg~G-s~~G~~~~Dtv~i 94 (97)
T 1lya_A 65 -STYVK----NGTSFDIHYGSG-SLSGYLSQDTVSV 94 (97)
T ss_dssp -TTCEE----EEEEEEEECSSC-EEEEEEEEEEEEE
T ss_pred -CCcee----CCCcEEEEECCc-EEEEEEEEEEEEE
Confidence 46654 578999999999 5999999999999
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.59 E-value=1e-15 Score=116.09 Aligned_cols=73 Identities=18% Similarity=0.448 Sum_probs=59.3
Q ss_pred cCccEEEEEeCCCCceEEEeCCCeEEEEeCC--CcEEEEEEcCCCC-CCCCceeEcccceeceEEEEeCCCCEEEEecCC
Q 014185 342 YFKPLALSFTNRRNSVRLVVPPEAYLVISGR--KNVCLGILNGSEA-EVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED 418 (429)
Q Consensus 342 ~~P~i~~~f~~~~~g~~~~l~~~~y~~~~~~--~~~C~~~~~~~~~-~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~ 418 (429)
.+|+|+|+|++ .+++|+|++|+.+... +..|++.+.+.+. +..+.||||+.|||++|+|||++++|||||+++
T Consensus 12 ~~P~i~f~~gg----~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~riGfA~~~ 87 (87)
T 1b5f_B 12 SMPNVSFTIGG----KKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLLVGFAEAA 87 (87)
T ss_dssp GCCCEEEEETT----EEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred cCCcEEEEECC----EEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCCEEEEEEcC
Confidence 47999999965 8999999999997643 3689865443221 234689999999999999999999999999864
No 38
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=93.35 E-value=0.099 Score=42.72 Aligned_cols=29 Identities=10% Similarity=0.091 Sum_probs=26.0
Q ss_pred CceeEcccceeceEEEEeCCCCEEEEecC
Q 014185 389 ENNIIGEIFMQDKMVIYDNEKQRIGWKPE 417 (429)
Q Consensus 389 ~~~ilG~~fl~~~y~vfD~~~~~iGfa~~ 417 (429)
-..|||..||+.+-.+.|++++++-|...
T Consensus 107 ~d~LLGmD~L~~~~~~ID~~~~~L~l~~~ 135 (148)
T 3s8i_A 107 MDMLLGLDMLRRHQCSIDLKKNVLVIGTT 135 (148)
T ss_dssp SSEEECHHHHHHTTCEEETTTTEEECTTT
T ss_pred cCeeccHHHHHhCCEEEEcCCCEEEEccC
Confidence 35799999999999999999999998753
No 39
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=87.62 E-value=0.57 Score=35.11 Aligned_cols=26 Identities=31% Similarity=0.416 Sum_probs=23.7
Q ss_pred EEEEEeCCCCcEEEEEEecCCCceeeeC
Q 014185 69 AVNLTVGKPPKLFDFDFDTGSDLTWVQC 96 (429)
Q Consensus 69 ~~~i~iGtP~q~~~~~~DTGSs~~wv~~ 96 (429)
.+++.|| +|.+.+++|||..++.+..
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEE 35 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESC
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEec
Confidence 5789999 9999999999999999964
No 40
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=87.60 E-value=0.55 Score=35.64 Aligned_cols=25 Identities=16% Similarity=0.271 Sum_probs=23.4
Q ss_pred EEEEEeCCCCcEEEEEEecCCCceeee
Q 014185 69 AVNLTVGKPPKLFDFDFDTGSDLTWVQ 95 (429)
Q Consensus 69 ~~~i~iGtP~q~~~~~~DTGSs~~wv~ 95 (429)
.+++.|| +|.+.+++|||+.++.+.
T Consensus 10 ~v~v~I~--Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 10 TTIVLIN--DTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEc
Confidence 5889999 999999999999999996
No 41
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=85.35 E-value=0.72 Score=37.37 Aligned_cols=30 Identities=17% Similarity=0.202 Sum_probs=26.6
Q ss_pred CceEEEEEEeCCCCcEEEEEEecCCCceeeeC
Q 014185 65 LGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQC 96 (429)
Q Consensus 65 ~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~ 96 (429)
.+.+++++.|+ ++++++++|||++.+.+..
T Consensus 24 ~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 24 VPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred cceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 45789999999 8999999999999998853
No 42
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=85.21 E-value=0.86 Score=34.11 Aligned_cols=26 Identities=23% Similarity=0.235 Sum_probs=23.7
Q ss_pred EEEEEeCCCCcEEEEEEecCCCceeeeC
Q 014185 69 AVNLTVGKPPKLFDFDFDTGSDLTWVQC 96 (429)
Q Consensus 69 ~~~i~iGtP~q~~~~~~DTGSs~~wv~~ 96 (429)
++++.|| +|.+.+++|||..++.+..
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~ 35 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAG 35 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESS
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcC
Confidence 5789999 9999999999999999954
No 43
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=80.28 E-value=1.6 Score=33.30 Aligned_cols=29 Identities=28% Similarity=0.438 Sum_probs=24.6
Q ss_pred EEEEEeC---CCCcEEEEEEecCCCceeeeCC
Q 014185 69 AVNLTVG---KPPKLFDFDFDTGSDLTWVQCD 97 (429)
Q Consensus 69 ~~~i~iG---tP~q~~~~~~DTGSs~~wv~~~ 97 (429)
.++|.|| +|+|.+..++|||..++.+...
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~ 43 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIA 43 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGG
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecc
Confidence 4667776 7899999999999999999754
No 44
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=79.68 E-value=1.7 Score=33.58 Aligned_cols=26 Identities=27% Similarity=0.363 Sum_probs=22.8
Q ss_pred EEEEEeCCCCcEEEEEEecCCCceeeeCC
Q 014185 69 AVNLTVGKPPKLFDFDFDTGSDLTWVQCD 97 (429)
Q Consensus 69 ~~~i~iGtP~q~~~~~~DTGSs~~wv~~~ 97 (429)
++ +.|| +|.+.+++|||..++.+.-.
T Consensus 16 ~v-ikI~--Gq~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 16 IL-IFVN--GYPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EE-EEET--TEEEEEEECTTCSSCEEEGG
T ss_pred EE-EEEC--CEEEEEEecCCCCcEEEccc
Confidence 45 9999 99999999999999999643
No 45
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=78.71 E-value=1.6 Score=35.35 Aligned_cols=30 Identities=17% Similarity=0.198 Sum_probs=26.6
Q ss_pred ceEEEEEEeCCCCcEEEEEEecCCCceeeeCC
Q 014185 66 GYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCD 97 (429)
Q Consensus 66 ~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~ 97 (429)
..|++++.|. +++++++||||++.+.+...
T Consensus 23 ~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 23 TMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred CEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 3689999998 99999999999999999643
No 46
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=77.63 E-value=2.3 Score=32.64 Aligned_cols=27 Identities=26% Similarity=0.437 Sum_probs=24.2
Q ss_pred EEEEEeCCCCcEEEEEEecCCCceeeeCC
Q 014185 69 AVNLTVGKPPKLFDFDFDTGSDLTWVQCD 97 (429)
Q Consensus 69 ~~~i~iGtP~q~~~~~~DTGSs~~wv~~~ 97 (429)
.+++.|| +|.+..++|||..++.+...
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~ 37 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLE 37 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGG
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEecc
Confidence 5789999 99999999999999999644
No 47
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=72.21 E-value=4 Score=32.82 Aligned_cols=27 Identities=11% Similarity=0.195 Sum_probs=24.9
Q ss_pred ceeEcccceeceEEEEeCCCCEEEEec
Q 014185 390 NNIIGEIFMQDKMVIYDNEKQRIGWKP 416 (429)
Q Consensus 390 ~~ilG~~fl~~~y~vfD~~~~~iGfa~ 416 (429)
..|||..||+.+-+.+|++++++-|..
T Consensus 109 d~iLG~d~L~~~~~~ID~~~~~l~l~~ 135 (148)
T 2i1a_A 109 DVLIGLDMLKRHLACVDLKENVLRIAE 135 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEEETT
T ss_pred CeEecHHHHhhCCEEEECCCCEEEEcc
Confidence 579999999999999999999999963
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=71.41 E-value=3.8 Score=32.39 Aligned_cols=28 Identities=25% Similarity=0.283 Sum_probs=24.6
Q ss_pred eEEEEEEeCCCCcEEEEEEecCCCceeeeC
Q 014185 67 YFAVNLTVGKPPKLFDFDFDTGSDLTWVQC 96 (429)
Q Consensus 67 ~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~ 96 (429)
.-.+++.|+ +|.+.+++|||.+++.+..
T Consensus 22 RP~v~i~I~--G~~~~~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 22 EPRITLKVG--GQPVTFLVDTGAQHSVLTQ 49 (132)
T ss_dssp SSEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CCEEEEEEC--CEEEEEEEeCCCCeEEEcc
Confidence 346889999 9999999999999999964
No 49
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=66.15 E-value=5.2 Score=34.09 Aligned_cols=27 Identities=30% Similarity=0.341 Sum_probs=24.1
Q ss_pred EEEEEEeCCCCcEEEEEEecCCCceeeeC
Q 014185 68 FAVNLTVGKPPKLFDFDFDTGSDLTWVQC 96 (429)
Q Consensus 68 y~~~i~iGtP~q~~~~~~DTGSs~~wv~~ 96 (429)
-.+++.|| +|.+.+++|||.+++.+..
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIEE 35 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEec
Confidence 36889999 9999999999999999953
No 50
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=61.50 E-value=6.4 Score=30.68 Aligned_cols=23 Identities=17% Similarity=0.264 Sum_probs=19.9
Q ss_pred EeCCCCcEEEEEEecCCCceeeeCC
Q 014185 73 TVGKPPKLFDFDFDTGSDLTWVQCD 97 (429)
Q Consensus 73 ~iGtP~q~~~~~~DTGSs~~wv~~~ 97 (429)
.|| +|.+..++|||..++.+...
T Consensus 26 ~i~--gq~~eaLLDTGAD~TVl~~~ 48 (124)
T 2rsp_A 26 KQR--SVYITALLDSGADITIISEE 48 (124)
T ss_dssp SCS--EEEEEEEECTTCSSCEEETT
T ss_pred cCC--CEEEEEEecCCCCcEEEecc
Confidence 377 89999999999999999744
No 51
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=43.08 E-value=21 Score=30.29 Aligned_cols=27 Identities=30% Similarity=0.341 Sum_probs=23.9
Q ss_pred EEEEEEeCCCCcEEEEEEecCCCceeeeC
Q 014185 68 FAVNLTVGKPPKLFDFDFDTGSDLTWVQC 96 (429)
Q Consensus 68 y~~~i~iGtP~q~~~~~~DTGSs~~wv~~ 96 (429)
=.+++.|| +|.+..++|||..++.+..
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl~~ 139 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVIEE 139 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CcEEEEEC--CEEEeeeecccCCceeeec
Confidence 36889999 9999999999999999953
No 52
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=30.37 E-value=56 Score=28.24 Aligned_cols=30 Identities=17% Similarity=0.205 Sum_probs=22.6
Q ss_pred eEEEE---EEeCCC-----CcEEEEEEecCCCceeeeC
Q 014185 67 YFAVN---LTVGKP-----PKLFDFDFDTGSDLTWVQC 96 (429)
Q Consensus 67 ~y~~~---i~iGtP-----~q~~~~~~DTGSs~~wv~~ 96 (429)
.|.++ |.||.. .....++||||++.+++|.
T Consensus 189 ~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~ 226 (239)
T 1b5f_A 189 YWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPT 226 (239)
T ss_dssp TEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECH
T ss_pred eEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCH
Confidence 56665 677742 3457899999999999974
No 53
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=30.24 E-value=53 Score=29.85 Aligned_cols=42 Identities=26% Similarity=0.399 Sum_probs=28.4
Q ss_pred CCcEEeecccCCCCCCCEEeeecEEEECCEEeccCCCcEEEecCCcceeecHHH
Q 014185 246 SGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRV 299 (429)
Q Consensus 246 g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGt~~~~lp~~~ 299 (429)
|.+...|+... ..|.++ |.||.+. ..++||||++.+++|..-
T Consensus 4 g~v~~~~~~~~----~~Y~~~---i~iG~Q~-----~~v~~DTGSs~lWv~~~~ 45 (323)
T 1bxo_A 4 GVATNTPTAND----EEYITP---VTIGGTT-----LNLNFDTGSADLWVFSTE 45 (323)
T ss_dssp EEEEEEECGGG----SCEEEE---EEETTEE-----EEEEEETTCCCEEECBTT
T ss_pred CceeeeecCCC----CEEEEE---EEECCEE-----EEEEEeCCCcceEEecCC
Confidence 34445555543 567654 6678443 379999999999999753
No 54
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=28.50 E-value=56 Score=29.75 Aligned_cols=31 Identities=23% Similarity=0.361 Sum_probs=23.1
Q ss_pred CCEEeeecEEEECCEEeccCCCcEEEecCCcceeecHHH
Q 014185 261 KHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRV 299 (429)
Q Consensus 261 ~~w~v~l~~i~v~~~~~~~~~~~aiiDSGt~~~~lp~~~ 299 (429)
..|.++ |.||.+. ..++||||++.+++|..-
T Consensus 14 ~~Y~~~---i~iG~Q~-----~~v~~DTGSs~lWv~~~~ 44 (325)
T 1ibq_A 14 EEYLTP---VTVGKST-----LHLDFDTGSADLWVFSDE 44 (325)
T ss_dssp SCEEEE---EEEBTEE-----EEEEEETTCCCEEEECTT
T ss_pred CEEEEE---EEECCEE-----EEEEEeCCCccceEeeCC
Confidence 567655 5677443 379999999999999753
No 55
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=28.31 E-value=38 Score=25.31 Aligned_cols=34 Identities=18% Similarity=0.244 Sum_probs=26.4
Q ss_pred CEEeeecEEEECCEEeccCCCcEEEecCCcceeecHHHH
Q 014185 262 HYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVY 300 (429)
Q Consensus 262 ~w~v~l~~i~v~~~~~~~~~~~aiiDSGt~~~~lp~~~~ 300 (429)
.|.=.+..+.|+|+.+ .+++|||+-.+.+.....
T Consensus 5 l~~RP~v~v~I~Gq~~-----e~LLDTGAD~TVl~~~~w 38 (104)
T 1fmb_A 5 LEKRPTTIVLINDTPL-----NVLLDTGADTSVLTTAHY 38 (104)
T ss_dssp SSSCCEEEEEETTEEE-----EEEECTTCSSCEEEHHHH
T ss_pred ccCCCEEEEEECCEEE-----EEEeccCCCcEEEccccC
Confidence 3544556688999854 799999999999987665
No 56
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=28.12 E-value=61 Score=29.48 Aligned_cols=42 Identities=24% Similarity=0.368 Sum_probs=28.2
Q ss_pred CCcEEeecccCCCCCCCEEeeecEEEECCEEeccCCCcEEEecCCcceeecHHH
Q 014185 246 SGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRV 299 (429)
Q Consensus 246 g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGt~~~~lp~~~ 299 (429)
|.+...|+... ..|.++ |.||.+. ..++||||++.+++|..-
T Consensus 4 ~~v~~~~~~~~----~~Y~~~---i~iG~q~-----~~v~~DTGSs~lWv~~~~ 45 (323)
T 1izd_A 4 GSVTTNPTSND----EEYITQ---VTVGDDT-----LGLDFDTGSADLWVFSSQ 45 (323)
T ss_dssp EEEEEEECGGG----CCEEEE---EEETTEE-----EEEEEETTCCCEEECBTT
T ss_pred CceeeeEcCCC----CEEEEE---EEECCEE-----EEEEEcCCCcceEEecCC
Confidence 34444555433 567654 6677443 479999999999999753
No 57
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=27.34 E-value=38 Score=29.94 Aligned_cols=14 Identities=14% Similarity=0.026 Sum_probs=9.8
Q ss_pred CCEEeeecEEEECC
Q 014185 261 KHYILGPAELLYSG 274 (429)
Q Consensus 261 ~~w~v~l~~i~v~~ 274 (429)
.-|.+.+..+.+++
T Consensus 181 tpyyvtl~~l~~~~ 194 (257)
T 3q48_A 181 TPYYVSFASVELIV 194 (257)
T ss_dssp SSSCEEEEEEEEEE
T ss_pred CceEEEEEEEEEcc
Confidence 55678888887743
No 58
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=26.49 E-value=40 Score=24.97 Aligned_cols=31 Identities=13% Similarity=0.163 Sum_probs=24.0
Q ss_pred CEEeeecEEEECCEEeccCCCcEEEecCCcceeecH
Q 014185 262 HYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTS 297 (429)
Q Consensus 262 ~w~v~l~~i~v~~~~~~~~~~~aiiDSGt~~~~lp~ 297 (429)
.|.=.+..+.++|+.+ .+++|||+-.+.+.+
T Consensus 5 l~~rP~vtvkI~Gq~~-----eaLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 5 LWKRPLVTIKIGGQLK-----EALLDTGADDTIIEE 35 (99)
T ss_dssp SSSCCEEEEEETTEEE-----EEEECTTCSSEEESC
T ss_pred ccCCCEEEEEECCEEE-----EEEeccCCCcEEEec
Confidence 3544566788999865 699999999998764
No 59
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=25.89 E-value=75 Score=29.32 Aligned_cols=46 Identities=20% Similarity=0.352 Sum_probs=30.4
Q ss_pred CCCcEEeecccCCCCCCCEEeeecEEEECCEEeccCCCcEEEecCCcceeecHH
Q 014185 245 SSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSR 298 (429)
Q Consensus 245 ~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGt~~~~lp~~ 298 (429)
.|.+...|+.+.. ...|.+. |.||.- .+...++||||++.+++|..
T Consensus 4 ~g~~~~~~l~~~~--~~~Y~~~---i~iGtP---~q~~~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 4 DGSVDTPGLYDFD--LEEYAIP---VSIGTP---GQDFYLLFDTGSSDTWVPHK 49 (361)
T ss_dssp -CCEEEEEEEETT--TTEEEEE---EEETTT---TEEEEEEEETTCCCCEEEBT
T ss_pred CCccceEEeecCC--CCEEEEE---EEECCC---CcEEEEEEcCCCCCeEECCC
Confidence 4666777887643 2566654 567731 11237999999999999864
No 60
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=24.81 E-value=80 Score=28.62 Aligned_cols=44 Identities=23% Similarity=0.329 Sum_probs=28.6
Q ss_pred CcEEeecccCCCCCCCEEeeecEEEECCEEeccCCCcEEEecCCcceeecHH
Q 014185 247 GVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSR 298 (429)
Q Consensus 247 ~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGt~~~~lp~~ 298 (429)
+....|+.+.. ...|.++ |.||.- .+...++||||++.+++|..
T Consensus 2 ~~~~~~l~n~~--~~~Y~~~---i~iGtP---~q~~~v~~DTGSs~~Wv~~~ 45 (323)
T 3cms_A 2 EVASVPLTNYL--DSQYFGK---IYLGTP---PQEFTVLFDTGSSDFWVPSI 45 (323)
T ss_dssp CCEEEEEEEET--TTEEEEE---EEETTT---TEEEEEEEETTCCCEEEEBT
T ss_pred CcceeeeEecc--CCEEEEE---EEECCC---CeEEEEEEeCCccceEEcCC
Confidence 45556766632 2556654 567741 12347999999999999864
No 61
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=24.43 E-value=59 Score=25.47 Aligned_cols=28 Identities=25% Similarity=0.344 Sum_probs=21.9
Q ss_pred eeecEEEECCEEeccCCCcEEEecCCcceeecH
Q 014185 265 LGPAELLYSGKSCGLKDLTLIFDSGASYAYFTS 297 (429)
Q Consensus 265 v~l~~i~v~~~~~~~~~~~aiiDSGt~~~~lp~ 297 (429)
=.+..+.|+|+.+ .+++|||...+.|++
T Consensus 22 RP~v~i~I~G~~~-----~~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 22 EPRITLKVGGQPV-----TFLVDTGAQHSVLTQ 49 (132)
T ss_dssp SSEEEEEETTEEE-----EEEECTTCSSCEECS
T ss_pred CCEEEEEECCEEE-----EEEEeCCCCeEEEcc
Confidence 3445588888765 689999999998875
No 62
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=22.35 E-value=55 Score=25.01 Aligned_cols=31 Identities=13% Similarity=0.206 Sum_probs=25.0
Q ss_pred CCEEeeecEEEECCEEeccCCCcEEEecCCcceeecH
Q 014185 261 KHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTS 297 (429)
Q Consensus 261 ~~w~v~l~~i~v~~~~~~~~~~~aiiDSGt~~~~lp~ 297 (429)
..|+=.+. +.|+|+.+ .+++|||+-.+.+.+
T Consensus 10 ~l~~rP~v-ikI~Gq~~-----eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 10 LEKRPEIL-IFVNGYPI-----KFLLDTGADITVLNR 40 (116)
T ss_dssp SSSCCEEE-EEETTEEE-----EEEECTTCSSCEEEG
T ss_pred cccCCCEE-EEECCEEE-----EEEecCCCCcEEEcc
Confidence 35666777 99999865 699999999998774
No 63
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=22.05 E-value=85 Score=28.65 Aligned_cols=44 Identities=18% Similarity=0.264 Sum_probs=26.9
Q ss_pred eeEEeeccCCCCCceEEE--EEEeCCCCcE----EEEEEecCCCceeeeCC
Q 014185 53 SVFLRALGSIYPLGYFAV--NLTVGKPPKL----FDFDFDTGSDLTWVQCD 97 (429)
Q Consensus 53 ~~~~p~~~~~~~~~~y~~--~i~iGtP~q~----~~~~~DTGSs~~wv~~~ 97 (429)
...+|+..+.....+|.+ .|.||. .+. ..++||||++.+++|..
T Consensus 174 l~~~p~~~~~~~~~~w~v~~~i~v~~-~~~l~~~~~aiiDSGTt~~~lP~~ 223 (340)
T 1wkr_A 174 ITYTPITSTSPASAYWGINQSIRYGS-STSILSSTAGIVDTGTTLTLIASD 223 (340)
T ss_dssp CEEEECCSSTTGGGSSEEEEEEEETT-TEEEEEEEEEEECTTBCSEEECHH
T ss_pred eEEEECccCCCCcceEEEEeeEEECC-CeEccCCCeEEEeCCcccccCCHH
Confidence 345666542111233443 578884 133 37999999999999754
No 64
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=22.02 E-value=78 Score=27.17 Aligned_cols=31 Identities=26% Similarity=0.317 Sum_probs=22.7
Q ss_pred eEEE---EEEeCCC----CcEEEEEEecCCCceeeeCC
Q 014185 67 YFAV---NLTVGKP----PKLFDFDFDTGSDLTWVQCD 97 (429)
Q Consensus 67 ~y~~---~i~iGtP----~q~~~~~~DTGSs~~wv~~~ 97 (429)
.|.+ .|.||.- .....+++|||++.+++|..
T Consensus 100 ~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 100 YWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp TBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred EEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 4555 4668752 24578999999999999754
No 65
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=21.12 E-value=94 Score=29.20 Aligned_cols=42 Identities=12% Similarity=0.123 Sum_probs=27.0
Q ss_pred ceeEEeeccCCCCCceEEEE---EEeCCCCcEE----------------EEEEecCCCceeeeCC
Q 014185 52 SSVFLRALGSIYPLGYFAVN---LTVGKPPKLF----------------DFDFDTGSDLTWVQCD 97 (429)
Q Consensus 52 ~~~~~p~~~~~~~~~~y~~~---i~iGtP~q~~----------------~~~~DTGSs~~wv~~~ 97 (429)
....+|+..+. .+.|.++ |.||. +.+ .++||||++.+.++..
T Consensus 216 ~l~~~Pl~~~~--~~~y~v~l~~i~v~g--~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~ 276 (403)
T 3aup_A 216 DLAFTPLTITL--QGEYNVRVNSIRINQ--HSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQS 276 (403)
T ss_dssp TEEEEECEECT--TSCEEECEEEEEETT--EEEECC------------CCEEECSSCSSEEECHH
T ss_pred ceeecccccCC--CCcceEEEEEEEECC--EEcccCChhHeeeccCCCCCEEEECCCccEEeCHH
Confidence 34456765432 2467765 56773 333 1899999999999743
No 66
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=20.68 E-value=1.6e+02 Score=26.58 Aligned_cols=41 Identities=20% Similarity=0.310 Sum_probs=27.1
Q ss_pred eEEeeccCCCCCceEEEE---EEeCCC---CcEEEEEEecCCCceeeeCC
Q 014185 54 VFLRALGSIYPLGYFAVN---LTVGKP---PKLFDFDFDTGSDLTWVQCD 97 (429)
Q Consensus 54 ~~~p~~~~~~~~~~y~~~---i~iGtP---~q~~~~~~DTGSs~~wv~~~ 97 (429)
..+|+... .+.|.++ |.||.- .....++||||++.++++..
T Consensus 183 ~~~p~~~~---~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 229 (329)
T 1oew_A 183 TYTAVSTK---QGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPAT 229 (329)
T ss_dssp EEEECBCT---TSSCEEEEEEEEETTSCCEEEEEEEEECTTCCSEEECHH
T ss_pred EEEEccCC---CceEEEEEeeEEECCeeccCCCceEEEeCCCCCEECCHH
Confidence 45566421 2345554 678752 24678999999999999754
Done!