Your job contains 1 sequence.
>014188
MDPQAFIRLSIGSLGLRIPGSALNSAESGIHAFSSPCLCEIRLRGFPVQTTQVPLVSSPE
ALPDIHSIASSFYLEESDLKALLTPGCFYSPHAYLEVVVFTGRKGFHCGVGIKRHQIGTF
KLEVGPEWGEGKPIILFNGWIGIGKNKQETGKPGAELHLKVKLDPDPRYVFQFEDVTMLS
PQIVQLQGSIKQPIFSCKFSRDRGPQVDLLSSYWSGSVDCNALETERRERKGWKVKIHDL
SGSAVAAAFITTPFVPSTGCDWVARSNPGAWLIVRPDACRAESWQPWGKLEAWRERGIRD
SVCCRFHLLSEGQEAGEVLMSEILISAEKGGEFFIDTDKQLRTATSPIPSPQSSGDFSGL
GPVIGGFVMCCRVQGEGKRSKPMVQLAMRHVTCVEDAAIFMALAAAVDLSIEACRPFRRK
LRRRSHHSL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014188
(429 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2151391 - symbol:ASG1 "AT5G17640" species:3702... 1722 2.5e-177 1
TAIR|locus:2201881 - symbol:AT1G10020 "AT1G10020" species... 717 9.0e-90 2
TAIR|locus:2091186 - symbol:AT3G19680 species:3702 "Arabi... 509 4.3e-76 3
TAIR|locus:2118259 - symbol:AT4G29310 "AT4G29310" species... 766 5.0e-76 1
TAIR|locus:2031075 - symbol:AT1G50040 "AT1G50040" species... 676 1.7e-66 1
>TAIR|locus:2151391 [details] [associations]
symbol:ASG1 "AT5G17640" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009651
"response to salt stress" evidence=IEP] [GO:0009737 "response to
abscisic acid stimulus" evidence=IEP] GO:GO:0009737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009651 EMBL:AL391151
UniGene:At.49033 UniGene:At.70135 HOGENOM:HOG000238259
ProtClustDB:CLSN2679526 InterPro:IPR010410 Pfam:PF06219
EMBL:BT029737 IPI:IPI00544179 PIR:T51468 RefSeq:NP_197266.1
STRING:Q9LF60 EnsemblPlants:AT5G17640.1 GeneID:831630
KEGG:ath:AT5G17640 TAIR:At5g17640 eggNOG:NOG320196
InParanoid:Q9LF60 OMA:EDAAIFM PhylomeDB:Q9LF60
Genevestigator:Q9LF60 Uniprot:Q9LF60
Length = 432
Score = 1722 (611.2 bits), Expect = 2.5e-177, P = 2.5e-177
Identities = 333/422 (78%), Positives = 361/422 (85%)
Query: 1 MDPQAFIRLSIGSLGLRIPGSALNSAESGIHA--FSSPCLCEIRLRGFPVQTTQVPLVSS 58
MDPQAFIRLS+GSL LRIP +NS FSS C CEI+LRGFPVQTT +PL+ S
Sbjct: 1 MDPQAFIRLSVGSLALRIPKVLINSTSKSNEKKNFSSQCSCEIKLRGFPVQTTSIPLMPS 60
Query: 59 PEALPDIHSIASSFYLEESDLKALLTPGCFYSPHAYLEVVVFTGRKGFHCGVGIKRHQIG 118
+A PD HSI++SFYLEESDL+ALLTPGCFYSPHA+LE+ VFTG+K +CGVG KR QIG
Sbjct: 61 LDAAPDHHSISTSFYLEESDLRALLTPGCFYSPHAHLEISVFTGKKSLNCGVGGKRQQIG 120
Query: 119 TFKLEVGPEWGEGKPIILFNGWIGIGKNKQETGKPGAELHLKVKLDPDPRYVFQFEDVTM 178
FKLEVGPEWGEGKP+ILFNGWI IGK K++ G AELHLKVKLDPDPRYVFQFEDVT
Sbjct: 121 MFKLEVGPEWGEGKPMILFNGWISIGKTKRD-G--AAELHLKVKLDPDPRYVFQFEDVTT 177
Query: 179 LSPQIVQLQGSIKQPIFSCKFSRDRGPQVDLLSSYWSGSVDCNALETERRERKGWKVKIH 238
LSPQIVQL+GS+KQPIFSCKFSRDR QVD L+ YWS S D LE+ERRERKGWKVKIH
Sbjct: 178 LSPQIVQLRGSVKQPIFSCKFSRDRVSQVDPLNGYWSSSGDGTELESERRERKGWKVKIH 237
Query: 239 DLSGSAVAAAFITTPFVPSTGCDWVARSNPGAWLIVRPDACRAESWQPWGKLEAWRERGI 298
DLSGSAVAAAFITTPFVPSTGCDWVA+SNPGAWL+VRPD R SWQPWGKLEAWRERGI
Sbjct: 238 DLSGSAVAAAFITTPFVPSTGCDWVAKSNPGAWLVVRPDPSRPNSWQPWGKLEAWRERGI 297
Query: 299 RDSVCCRFHLLSEGQEAGEVLMSEILISAEKGGEFFIDTDKQLRT-ATSPIPSPQSSGDF 357
RDSVCCRFHLLS G E G+VLMSEILISAEKGGEF IDTDKQ+ T A +PIPSPQSSGDF
Sbjct: 298 RDSVCCRFHLLSNGLEVGDVLMSEILISAEKGGEFLIDTDKQMLTVAATPIPSPQSSGDF 357
Query: 358 SGLGPVI--GGFVMCCRVQGEGKRSKPMVQLAMRHVTCVEDAAIFMALAAAVDLSIEACR 415
SGLG + GGFVM RVQGEGK SKP+VQLAMRHVTCVEDAAIFMALAAAVDLSI AC+
Sbjct: 358 SGLGQCVSGGGFVMSSRVQGEGKSSKPVVQLAMRHVTCVEDAAIFMALAAAVDLSILACK 417
Query: 416 PF 417
PF
Sbjct: 418 PF 419
>TAIR|locus:2201881 [details] [associations]
symbol:AT1G10020 "AT1G10020" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC004122
EMBL:BT011247 EMBL:BT012548 IPI:IPI00526766 PIR:T00621
RefSeq:NP_172473.1 UniGene:At.43424 UniGene:At.67719 STRING:O80593
EnsemblPlants:AT1G10020.1 GeneID:837537 KEGG:ath:AT1G10020
TAIR:At1g10020 eggNOG:NOG276928 HOGENOM:HOG000238259
InParanoid:O80593 OMA:NGWISVG PhylomeDB:O80593
ProtClustDB:CLSN2679526 Genevestigator:O80593 InterPro:IPR010410
Pfam:PF06219 Uniprot:O80593
Length = 461
Score = 717 (257.5 bits), Expect = 9.0e-90, Sum P(2) = 9.0e-90
Identities = 155/375 (41%), Positives = 226/375 (60%)
Query: 1 MDPQAFIRLSIGSLGLRIPGSALNSAESGIHAFSSPCLCEIRLRGFPVQTTQVPLVS-SP 59
MDP FIRL+IG+L L++P +A + S +H SSPC C+I+L+ FP QT +P +
Sbjct: 1 MDPCPFIRLTIGNLALKVPLAA-KTTSSVVHPSSSPCFCKIKLKNFPPQTAAIPYIPLET 59
Query: 60 EALPDIHSIASSFYLEESDLKALLTPGCFYSPHAYLEVVVFTGRKGFHCGVGIKRHQIGT 119
P+I ++A++F+L SD++ L + F S L+++++TGR G CGV R +
Sbjct: 60 TQFPEIQTLAATFHLSSSDIQRLASRSIFTSKPC-LKILIYTGRAGAACGVHSGR-LLAK 117
Query: 120 FKLEVGPEWGEGKPIILFNGWIGIGKNKQETGKPGAELHLKVKLDPDPRYVFQFEDVTML 179
+ + + KP + NGWI +GK ++ A+ HL VK +PDPR+VFQF+
Sbjct: 118 VSVPLDLSGTQSKPCVFHNGWISVGKGAGKSSS-SAQFHLNVKAEPDPRFVFQFDGEPEC 176
Query: 180 SPQIVQLQGSIKQPIFSCKFS-RDRGPQVDLLSSY-WSGSVD---CNALETER----RER 230
SPQ+VQ+QG+I+QP+F+CKFS R G + S SV N+ +ER +ER
Sbjct: 177 SPQVVQIQGNIRQPVFTCKFSCRHTGDRTQRSRSLPTETSVSRSWLNSFGSERERPGKER 236
Query: 231 KGWKVKIHDLSGSAVAAAFITTPFVPSTGCDWVARSNPGAWLIVRPDACRAESWQPWGKL 290
KGW + +HDLSGS VA A I TPFV S G D V+RSNPG+WLI+RP C +W+PWG+L
Sbjct: 237 KGWSITVHDLSGSPVAMASIVTPFVASPGTDRVSRSNPGSWLILRPGDC---TWRPWGRL 293
Query: 291 EAWRERG-IRDSVCCRFHLLSEGQEAGEVLMSEILISAEKGGEFFID--TDKQLRTATSP 347
EAWRERG D + RF L+ +G ++++E IS+ +GG+F I+ + + TS
Sbjct: 294 EAWRERGGATDGLGYRFELIPDGSSGAGIVLAESTISSHRGGKFSIELGSSPSSSSPTSV 353
Query: 348 IPSPQSS-GDFSGLG 361
+ +S G SG G
Sbjct: 354 VNRSRSRRGGSSGSG 368
Score = 198 (74.8 bits), Expect = 9.0e-90, Sum P(2) = 9.0e-90
Identities = 42/76 (55%), Positives = 58/76 (76%)
Query: 346 SPIPSPQS-SGDFS-GLGP--VIGGFVMCCRVQGEGKRSKPMVQLAMRHVTCVEDAAIFM 401
SP SP+ SGD+ GL P V GFVM V+GEGK SKP V+++++HV+C+EDAA ++
Sbjct: 372 SPANSPRGGSGDYGYGLWPWNVYKGFVMSASVEGEGKCSKPCVEVSVQHVSCMEDAAAYV 431
Query: 402 ALAAAVDLSIEACRPF 417
AL+AA+DLS++ACR F
Sbjct: 432 ALSAAIDLSMDACRLF 447
>TAIR|locus:2091186 [details] [associations]
symbol:AT3G19680 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] GO:GO:0005886 GO:GO:0009536 EMBL:CP002686
EMBL:AP000417 UniGene:At.17613 ProtClustDB:CLSN2679526
InterPro:IPR010410 Pfam:PF06219 UniGene:At.8144 EMBL:AY150417
EMBL:AK227179 EMBL:AK230353 IPI:IPI00539223 PIR:T52398
RefSeq:NP_188602.1 PRIDE:Q9LJM6 EnsemblPlants:AT3G19680.1
GeneID:821505 KEGG:ath:AT3G19680 TAIR:At3g19680 InParanoid:Q9LJM6
OMA:MSATVEG PhylomeDB:Q9LJM6 Genevestigator:Q9LJM6 Uniprot:Q9LJM6
Length = 491
Score = 509 (184.2 bits), Expect = 4.3e-76, Sum P(3) = 4.3e-76
Identities = 116/280 (41%), Positives = 164/280 (58%)
Query: 102 GRKGFHCGVGIKRHQI-GTFKLEVGPEWGEGKPIILFNGWIGIG--KNKQETGKPGAELH 158
G G CG+ ++ G F++ + + E K + NGW+ + K K +TG ELH
Sbjct: 120 GVSGASCGLATAGEKLLGRFEVSLDLKSAETKSFLAHNGWVALPSKKTKSKTGSD-PELH 178
Query: 159 LKVKLDPDPRYVFQFEDVTMLSPQIVQLQGSIKQPIFSCKF-SRDR--GPQVDLLSSYWS 215
+ V+++PDPR+VFQF+ SPQ+ Q+QG+ KQ +F+CKF SR+ G + L SS
Sbjct: 179 VSVRVEPDPRFVFQFDGEPECSPQVFQVQGNTKQAVFTCKFGSRNSNSGDRNLLHSSSMM 238
Query: 216 GSVD----C-NALETER----RERKGWKVKIHDLSGSAVAAAFITTPFVPSTGCDWVARS 266
+ C +++ +E+ +ERKGW + +HDLSGS VA A + TPFVPS G + V RS
Sbjct: 239 SEISSTRSCISSMNSEKEQPSKERKGWSITVHDLSGSPVAMASMVTPFVPSPGSNRVTRS 298
Query: 267 NPGAWLIVRPDACRAESWQPWGKLEAWRERGIRDSVCCRFHLLSEGQEAGEVLMSEILIS 326
+PGAWLI+RPD C +W+PWG+LEAWRE G D++ RF L +G + + IS
Sbjct: 299 SPGAWLILRPDGC---TWKPWGRLEAWREAGYSDTLGYRFELFQDG--IATAVSASSSIS 353
Query: 327 AEKGGEFFID-TDKQLRTATSPIPSPQSSGDFSGLGPVIG 365
+ GG F ID T TA++P SPQ S D G G G
Sbjct: 354 LKNGGSFVIDVTGGTSTTASTPTTSPQGSWDL-GSGSSAG 392
Score = 173 (66.0 bits), Expect = 4.3e-76, Sum P(3) = 4.3e-76
Identities = 34/52 (65%), Positives = 41/52 (78%)
Query: 366 GFVMCCRVQGEGKRSKPMVQLAMRHVTCVEDAAIFMALAAAVDLSIEACRPF 417
GFVM V+G GKRSKP V++ + HVTC EDAA +ALAAAVDLS++ACR F
Sbjct: 423 GFVMSATVEGVGKRSKPEVEVGVTHVTCTEDAAAHVALAAAVDLSLDACRLF 474
Score = 116 (45.9 bits), Expect = 4.3e-76, Sum P(3) = 4.3e-76
Identities = 28/97 (28%), Positives = 54/97 (55%)
Query: 1 MDPQAFIRLSIGSLGLRIPGSALNSAES------GIHAFSSPCLCEIRLRGFPVQTTQVP 54
MDP +F+R+ +G+L +R P S+ +S+ S GI+ + C C+IR + FP + VP
Sbjct: 1 MDPCSFVRIIVGNLAVRFPSSSSSSSSSSGPSVSGINPTAPNCYCKIRFKNFPREIVSVP 60
Query: 55 LVSSPEALPD--------IHSIASSFYLEESDLKALL 83
++ E+ + + ++A+ F L ++ ++A L
Sbjct: 61 VMFRTESESETRCSSSGNVSTVAACFSLSKAQIEASL 97
>TAIR|locus:2118259 [details] [associations]
symbol:AT4G29310 "AT4G29310" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009505 "plant-type cell wall" evidence=IDA]
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161574 GO:GO:0009505
HOGENOM:HOG000238259 ProtClustDB:CLSN2679526 InterPro:IPR010410
Pfam:PF06219 EMBL:AY093214 EMBL:BT003402 IPI:IPI00533803 PIR:T13451
RefSeq:NP_194660.1 UniGene:At.31937 UniGene:At.67411
EnsemblPlants:AT4G29310.1 GeneID:829053 KEGG:ath:AT4G29310
TAIR:At4g29310 eggNOG:NOG270107 InParanoid:Q9M0F0 OMA:WARLEAW
PhylomeDB:Q9M0F0 Genevestigator:Q9M0F0 Uniprot:Q9M0F0
Length = 424
Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
Identities = 181/429 (42%), Positives = 253/429 (58%)
Query: 1 MDPQAFIRLSIGSLGLRIPGSALNSAESG-IHAFSSPCLCEIRLRGFPVQTTQVPLVSSP 59
MDP F+RL+I SL LR+P +A N G +H S+PC C++R++ FP Q +PL S
Sbjct: 1 MDPCPFVRLTIDSLALRLPETATNKQIGGEVHPSSTPCYCKLRIKHFPSQKALLPLSSFS 60
Query: 60 EAL--PDIHSIASSFYLEESDLKALLTPGCFYSPHAYLEVVVFTGRKGFHCGVGIKRHQI 117
+A P+ + A F+L+ ++ + G S L V V+ GR G CGV + +
Sbjct: 61 DASSPPESSTSAPGFHLDADAIRRI--SGKKIS----LRVSVYAGRTGHTCGVASGK-LL 113
Query: 118 GTFKLEVGPEWGEGKPIILFNGWIGIGKNKQETGKPGAELHLKVKLDPDPRYVFQFEDVT 177
G ++ V + + NGW +G + KP A LHL V +PDPR+VFQF
Sbjct: 114 GKVEVAVDLAAALSRTVAFHNGWKKLGGDGD---KPSARLHLLVCAEPDPRFVFQFGGEP 170
Query: 178 MLSPQIVQLQGSIKQPIFSCKFSRDR-GPQVDLLSSY------W-SGSVDCNALETER-R 228
SP + Q+Q ++KQP+FSCKFS DR G L S + W + ++ + E ++ R
Sbjct: 171 ECSPVVYQIQDNLKQPVFSCKFSSDRNGRSRSLPSGFTYSSRGWITRTLSGDQWEKKQAR 230
Query: 229 ERKGWKVKIHDLSGSAVAAAFITTPFVPSTGCDWVARSNPGAWLIVRPDACRAESWQPWG 288
ERKGW + IHDLSGS VAAA + TPFV S G D V+RSNPGAWLI+RP SW+PWG
Sbjct: 231 ERKGWMITIHDLSGSPVAAASMITPFVASPGSDRVSRSNPGAWLILRPHGTCVSSWKPWG 290
Query: 289 KLEAWRERGIRDSVCCRFHLLSEGQEAGEVLMSEILISAEKGGEFFIDTDKQLRTATSPI 348
+LEAWRERG D + +F L+ + + + ++E +S ++GG+F ID R +
Sbjct: 291 RLEAWRERGAIDGLGYKFELVRDNSTSTGIPIAEGTMSTKQGGKFSID-----RRVSGQG 345
Query: 349 PSPQSSGDFSGLGPVIGGFVMCCRVQGEGKRSKPMVQLAMRHVTCVEDAAIFMALAAAVD 408
SP S PV GFVM V+GEGK SKP+V + +HVTC+ DAA+F+AL+AAVD
Sbjct: 346 ESPAISS------PV-KGFVMGSSVEGEGKVSKPVVHVGAQHVTCMADAALFVALSAAVD 398
Query: 409 LSIEACRPF 417
LS++AC+ F
Sbjct: 399 LSVDACQLF 407
>TAIR|locus:2031075 [details] [associations]
symbol:AT1G50040 "AT1G50040" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC015445
HOGENOM:HOG000238259 ProtClustDB:CLSN2679526 InterPro:IPR010410
Pfam:PF06219 EMBL:AY074383 EMBL:AY091244 IPI:IPI00527421 PIR:H96536
RefSeq:NP_175426.1 UniGene:At.43578 EnsemblPlants:AT1G50040.1
GeneID:841428 KEGG:ath:AT1G50040 TAIR:At1g50040 eggNOG:NOG248955
InParanoid:Q9LPM5 OMA:SESRCCS PhylomeDB:Q9LPM5 ArrayExpress:Q9LPM5
Genevestigator:Q9LPM5 Uniprot:Q9LPM5
Length = 460
Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
Identities = 177/459 (38%), Positives = 254/459 (55%)
Query: 1 MDPQAFIRLSIGSLGLRIP----GSALNSAESG--IHAFSSP-CLCEIRLRGFPVQTTQV 53
MDP +F+R+ +G+L +R P S+ +S+ SG + SS C C+I+ + FP Q V
Sbjct: 1 MDPCSFVRIIVGNLAVRFPRSPSSSSSSSSSSGPSVSDVSSGNCYCKIKFKSFPRQIVSV 60
Query: 54 PLVSSPEALPD-------IHSIASSFYLEESDLKALLTPGCFYSPHAYLEVVVFTGRKGF 106
P++ E+ + + ++A+ F L +S ++ L + + L V V++ R+
Sbjct: 61 PVLLRTESESESRCCSGNVSTVAACFSLSKSQIETSLKKAKW----SVLSVEVYS-RRSA 115
Query: 107 HCG-VGIKRHQ-IGTFKLEVGPEWGEGKPIILFNGWIGIGKNKQETGKPGA--ELHLKVK 162
CG V + IG F++ + + E K + NGW+ +G + K G+ ELH+ V+
Sbjct: 116 SCGFVAASGEKLIGRFQVTLDLKAAESKTCLAHNGWVDLGTKSKNNKKSGSDPELHVSVR 175
Query: 163 LDPDPRYVFQFEDVTMLSPQIVQLQGSIKQPIFSCKFS-RDRGPQ-VDL-LSSYWSGSVD 219
++PD R+VFQF+ SPQ+ Q+QG+ KQ +F+CKF R+ G + + L LSS SG
Sbjct: 176 VEPDTRFVFQFDGEPECSPQVFQVQGNAKQAVFTCKFGFRNSGDRNLSLSLSSVTSGK-- 233
Query: 220 CNALETERRERKGWKVKIHDLSGSAVAAAFITTPFVPSTGCDWVARSNPGAWLIVRPDAC 279
E +ERKGW + IHDLSGS VA A + TPFVPS G + V+RS+PGAWLI+RPD
Sbjct: 234 ----EQFSKERKGWSITIHDLSGSPVAMASMVTPFVPSPGSNRVSRSSPGAWLILRPDGY 289
Query: 280 RAESWQPWGKLEAWRERGIRDSVCCRFHLLSEGQEAGEVLMSEILISAEKGGEFFIDTDK 339
+W+PW +L+AWRE G+ D + RF L +G S I S + GG F ID
Sbjct: 290 ---TWKPWVRLQAWREPGVSDVLGYRFELYKDGIAVAVSASSSI--STKLGGSFIIDGST 344
Query: 340 QLRTATSPIPSP-----------QSSGDFSGLGPVIG----------GFVMCCRVQGEGK 378
T S S +SS SG G GFVM RVQG K
Sbjct: 345 STTTTASWSSSEGSFDLSSWSSIRSSRTDSGSGSDFRFSLSQAQQNLGFVMSTRVQGVEK 404
Query: 379 RSKPMVQLAMRHVTCVEDAAIFMALAAAVDLSIEACRPF 417
+SKP V++ ++HVTC EDAA +ALAAAVDLS++ACR F
Sbjct: 405 QSKPKVEVGVKHVTCTEDAAAHVALAAAVDLSMDACRLF 443
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.138 0.435 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 429 417 0.00082 118 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 623 (66 KB)
Total size of DFA: 278 KB (2144 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.41u 0.45s 30.86t Elapsed: 00:00:03
Total cpu time: 30.41u 0.45s 30.86t Elapsed: 00:00:03
Start: Fri May 10 05:38:54 2013 End: Fri May 10 05:38:57 2013