Query 014188
Match_columns 429
No_of_seqs 57 out of 59
Neff 2.9
Searched_HMMs 29240
Date Mon Mar 25 07:03:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014188.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014188hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1rlw_A Phospholipase A2, CALB 82.4 16 0.00054 28.5 10.9 100 35-166 27-126 (126)
2 2dmh_A Myoferlin; beta-sandwic 77.2 5.9 0.0002 31.7 6.5 104 35-167 27-135 (140)
3 3b7y_A E3 ubiquitin-protein li 74.2 19 0.00066 29.2 8.9 66 93-165 86-153 (153)
4 3m7f_B E3 ubiquitin-protein li 70.3 18 0.0006 30.5 8.0 67 93-166 74-142 (176)
5 3kwu_A MUNC13-1; calcium bindi 65.0 34 0.0012 27.5 8.4 104 35-165 38-147 (148)
6 1gmi_A Protein kinase C, epsil 61.1 23 0.0008 28.4 6.7 56 93-165 77-133 (136)
7 2r83_A Synaptotagmin-1; C2A-C2 61.0 90 0.0031 27.7 12.4 110 35-167 40-149 (284)
8 2ep6_A MCTP2 protein; beta san 50.2 23 0.00079 28.1 5.0 97 35-163 34-130 (133)
9 1wfj_A Putative elicitor-respo 47.2 11 0.00036 30.0 2.5 62 92-166 70-131 (136)
10 2d8k_A Synaptotagmin VII; exoc 47.0 1.1E+02 0.0037 24.4 9.1 43 93-145 93-135 (141)
11 2fk9_A Protein kinase C, ETA t 44.6 25 0.00086 30.4 4.6 94 34-164 59-156 (157)
12 1c3g_A Heat shock protein 40; 36.2 80 0.0027 27.5 6.6 46 119-170 37-83 (170)
13 2q2g_A HSP40 protein, heat sho 31.2 99 0.0034 27.1 6.4 46 119-170 43-89 (180)
14 1v27_A Regulating synaptic mem 30.5 1.8E+02 0.0063 22.7 7.3 44 93-145 90-133 (141)
15 4i21_C ERBB receptor feedback 27.9 10 0.00034 29.9 -0.6 19 163-190 40-58 (62)
16 1ugk_A Synaptotagmin IV, KIAA1 27.6 1.7E+02 0.0059 23.1 6.7 44 93-146 90-134 (138)
17 3agx_A DNAJ homolog subfamily 27.3 1.1E+02 0.0038 26.9 6.0 47 118-170 43-89 (181)
18 4aqt_A Laminin subunit gamma-1 26.8 28 0.00096 34.5 2.3 23 267-290 125-147 (375)
19 3tbd_A Netrin-G2, laminet-2; l 26.2 30 0.001 34.3 2.3 23 267-290 128-150 (338)
20 2y38_A Laminin subunit alpha-5 25.9 28 0.00095 35.1 2.1 24 267-291 132-155 (403)
21 4aqs_A Laminin subunit beta-1; 25.8 31 0.001 34.6 2.3 23 267-290 127-149 (525)
22 2bwq_A Regulating synaptic mem 25.5 1.1E+02 0.0037 23.8 5.1 42 93-143 87-128 (129)
23 1nlt_A Protein YDJ1, mitochond 25.1 1.1E+02 0.0038 28.2 5.8 47 118-170 112-158 (248)
24 3zyj_B Netrin-G1; cell adhesio 25.0 32 0.0011 35.0 2.3 23 267-290 156-178 (426)
25 2b3r_A Phosphatidylinositol-4- 21.0 3.2E+02 0.011 21.7 9.8 84 35-144 40-129 (134)
26 1rsy_A Synaptotagmin I; calciu 20.8 3.3E+02 0.011 21.9 9.2 87 35-144 63-149 (152)
27 3fdw_A Synaptotagmin-like prot 20.3 48 0.0016 26.8 2.1 42 93-145 92-134 (148)
No 1
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=82.39 E-value=16 Score=28.54 Aligned_cols=100 Identities=12% Similarity=0.123 Sum_probs=55.9
Q ss_pred CceeEEEecCCCCcceeeeccccCCCCCCCCCCcceeeecCHHHHHHhhCCCCCCCCCceEEEEEEecCCCcccccCCcc
Q 014188 35 SPCLCEIRLRGFPVQTTQVPLVSSPEALPDIHSIASSFYLEESDLKALLTPGCFYSPHAYLEVVVFTGRKGFHCGVGIKR 114 (429)
Q Consensus 35 spC~C~IrL~~fP~qta~vPL~~~~~~~p~~~~~Aa~F~Ld~s~l~~l~~~~~f~~~~~~L~v~Vy~Gr~G~~CGv~~~r 114 (429)
+-.||+|++.+-+.++..-..+.. ...|.- +-...|.+... ....|+|.||.-... . .
T Consensus 27 ~dpyv~v~~~~~~~~~~kT~v~~~-t~nP~w-ne~f~f~v~~~-------------~~~~l~i~V~d~d~~------~-~ 84 (126)
T 1rlw_A 27 PDPYVELFISTTPDSRKRTRHFNN-DINPVW-NETFEFILDPN-------------QENVLEITLMDANYV------M-D 84 (126)
T ss_dssp CCEEEEEECTTSTTCCEECCCCTT-CSSCEE-EEEEEEEECTT-------------SCCEEEEEEEECCSS------C-C
T ss_pred CCCEEEEEEccCCCceEEccccCC-CCCCcc-cceEEEEecCC-------------CCCEEEEEEEECCCC------C-C
Confidence 345999999975543333333321 123321 11233444221 135899999986543 2 3
Q ss_pred eeEEEEEEeecCCCCCCcceEEeeceeecCCCCcCCCCCCcEEEEEEeecCC
Q 014188 115 HQIGTFKLEVGPEWGEGKPIILFNGWIGIGKNKQETGKPGAELHLKVKLDPD 166 (429)
Q Consensus 115 ~llG~~~v~ldl~~ae~kp~v~h~GWi~iGk~~~~~~k~~aelHl~Vr~EpD 166 (429)
.+||.+.|+|.- -..+ .-|..|+.+-+. ..-++|+.+...||
T Consensus 85 ~~iG~~~i~l~~-l~~~---~~~~~~~~L~~~------~~g~i~~~le~~~~ 126 (126)
T 1rlw_A 85 ETLGTATFTVSS-MKVG---EKKEVPFIFNQV------TEMVLEMSLEVASS 126 (126)
T ss_dssp EEEEEEEEEGGG-SCTT---CEEEEEEEETTT------EEEEEEEEEECCCC
T ss_pred ceeEEEEEEHHH-ccCC---CcEEEEEEcCCC------ceEEEEEEEEeCCC
Confidence 389999999962 1223 256789998642 23466665555454
No 2
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=77.19 E-value=5.9 Score=31.70 Aligned_cols=104 Identities=17% Similarity=0.138 Sum_probs=59.1
Q ss_pred CceeEEEecCCCCcceeeeccccCCCCCCCCCCcceeeecCHHHHHHhhCCCCCCCCCceEEEEEEecCCCcccccCCcc
Q 014188 35 SPCLCEIRLRGFPVQTTQVPLVSSPEALPDIHSIASSFYLEESDLKALLTPGCFYSPHAYLEVVVFTGRKGFHCGVGIKR 114 (429)
Q Consensus 35 spC~C~IrL~~fP~qta~vPL~~~~~~~p~~~~~Aa~F~Ld~s~l~~l~~~~~f~~~~~~L~v~Vy~Gr~G~~CGv~~~r 114 (429)
+-.||+|++.+--.+|.. +. ....|.= +-...|.+...++ .....|+|.||.-... +...
T Consensus 27 ~dpyv~v~~~~~~~kT~v---~~-~t~nP~w-ne~f~f~v~~~~~----------~~~~~l~i~V~d~d~~-----~~~~ 86 (140)
T 2dmh_A 27 PDPIVSVIFKDEKKKTKK---VD-NELNPVW-NEILEFDLRGIPL----------DFSSSLGIIVKDFETI-----GQNK 86 (140)
T ss_dssp CCEEEEEECSSCEEECCC---CC-SCSSCEE-EEEEEEECSSCCC----------CTTCEEEEEEEETTCS-----SSCC
T ss_pred CCeEEEEEECCEeEEeee---ec-CCCCCcc-CcEEEEEeccccc----------CCCCEEEEEEEECCCC-----CCCc
Confidence 345999999974334433 31 1123321 1233444433222 1236899999986542 2233
Q ss_pred eeEEEEEEeec-CCCCCCcceEEeeceee---c-CCCCcCCCCCCcEEEEEEeecCCC
Q 014188 115 HQIGTFKLEVG-PEWGEGKPIILFNGWIG---I-GKNKQETGKPGAELHLKVKLDPDP 167 (429)
Q Consensus 115 ~llG~~~v~ld-l~~ae~kp~v~h~GWi~---i-Gk~~~~~~k~~aelHl~Vr~EpDP 167 (429)
+||.++|+|. +.... -+..|.. + ++. +.+...+|||.++..|.|
T Consensus 87 -~lG~~~i~l~~l~~~~-----~~~~w~~l~~l~~~~---~~~~~G~l~l~~~~~p~~ 135 (140)
T 2dmh_A 87 -LIGTATVALKDLTGDQ-----SRSLPYKLISLLNEK---GQDTGATIDLVIGYDPPS 135 (140)
T ss_dssp -CCEEEEEEGGGTCSSS-----CEEEEEEEEEEECTT---CCEEEEEEEEEEEECCCB
T ss_pred -eEEEEEEEHHHhccCC-----CceeEEeeeeccCCC---CCCCCCEEEEEEEEECCC
Confidence 8999999996 33222 2466876 3 221 123457999999988865
No 3
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=74.20 E-value=19 Score=29.19 Aligned_cols=66 Identities=12% Similarity=0.030 Sum_probs=41.6
Q ss_pred ceEEEEEEecCCCcccccCCcceeEEEEEEeec-CCCCCCc-ceEEeeceeecCCCCcCCCCCCcEEEEEEeecC
Q 014188 93 AYLEVVVFTGRKGFHCGVGIKRHQIGTFKLEVG-PEWGEGK-PIILFNGWIGIGKNKQETGKPGAELHLKVKLDP 165 (429)
Q Consensus 93 ~~L~v~Vy~Gr~G~~CGv~~~r~llG~~~v~ld-l~~ae~k-p~v~h~GWi~iGk~~~~~~k~~aelHl~Vr~Ep 165 (429)
..|+|.||.-... + ...+||.+.|+|. +...... -.-++..|..+.... ++++...+|||.+..-|
T Consensus 86 ~~l~~~V~d~d~~-----~-~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~-~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 86 HRLLFEVFDENRL-----T-RDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRS-HKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp CEEEEEEEECCSS-----S-CCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSS-TTCCCCSEEEEEEEECC
T ss_pred CEEEEEEEECCCC-----c-CCCeeEEEEEEHHHcccCCCccccccccccccccccc-CCCCcceEEEEEEEEeC
Confidence 5899999985442 2 2338999999996 2222211 023456899986532 22345679999987644
No 4
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=70.34 E-value=18 Score=30.48 Aligned_cols=67 Identities=12% Similarity=0.075 Sum_probs=40.1
Q ss_pred ceEEEEEEecCCCcccccCCcceeEEEEEEeecC-CCCCCc-ceEEeeceeecCCCCcCCCCCCcEEEEEEeecCC
Q 014188 93 AYLEVVVFTGRKGFHCGVGIKRHQIGTFKLEVGP-EWGEGK-PIILFNGWIGIGKNKQETGKPGAELHLKVKLDPD 166 (429)
Q Consensus 93 ~~L~v~Vy~Gr~G~~CGv~~~r~llG~~~v~ldl-~~ae~k-p~v~h~GWi~iGk~~~~~~k~~aelHl~Vr~EpD 166 (429)
..|+|.||.-.+. + ...+||.++|+|.- ...... ...++-.|..+-... ..++...+|||.++.-|.
T Consensus 74 ~~L~~~V~d~d~~-----~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~-~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 74 HRILFEVFDENRL-----T-RDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRS-HKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp CEEEEEEEECC----------CEEEEEEEEESCSCCBC------CCCCEEEECBCSS-TTCCCCSEEEEEEEECC-
T ss_pred CEEEEEEEECCCC-----C-CCcEEEEEEEEHHHccccCCcccccccccEEEccccC-CCCccCEEEEEEEEEEeC
Confidence 5899999985432 2 22389999999963 222221 122445799986532 223456799999987764
No 5
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=65.00 E-value=34 Score=27.53 Aligned_cols=104 Identities=13% Similarity=0.165 Sum_probs=58.0
Q ss_pred CceeEEEecCCCCcceeeeccccCCCCCCCCCCcceeeecCHHHHHHhhCCCCCCCCCceEEEEEEecCCCcc------c
Q 014188 35 SPCLCEIRLRGFPVQTTQVPLVSSPEALPDIHSIASSFYLEESDLKALLTPGCFYSPHAYLEVVVFTGRKGFH------C 108 (429)
Q Consensus 35 spC~C~IrL~~fP~qta~vPL~~~~~~~p~~~~~Aa~F~Ld~s~l~~l~~~~~f~~~~~~L~v~Vy~Gr~G~~------C 108 (429)
+-.||+|.+++--.+|..+. ....|.- +-.-.|.+.. + ...|+|.||.-..... =
T Consensus 38 ~dpyv~v~~~~~~~kT~~~~----~t~nP~W-ne~f~f~v~~--------~------~~~l~~~v~d~d~~~~~~~~~~~ 98 (148)
T 3kwu_A 38 SDPYVTVQVGKTKKRTKTIY----GNLNPVW-EENFHFECHN--------S------SDRIKVRVLDEDDDIKSRVKQRF 98 (148)
T ss_dssp CCEEEEEEETTEEEECCCCC----SCSSCEE-EEEEEEEECS--------T------TCEEEEEEEECCCSHHHHHHTTT
T ss_pred cCeEEEEEECCEEEECCccC----CCCCCCc-ccEEEEEecC--------C------CCEEEEEEEECCCCccccccccc
Confidence 34599999977444444332 1123321 1122333321 1 2479999998554200 0
Q ss_pred ccCCcceeEEEEEEeecCCCCCCcceEEeeceeecCCCCcCCCCCCcEEEEEEeecC
Q 014188 109 GVGIKRHQIGTFKLEVGPEWGEGKPIILFNGWIGIGKNKQETGKPGAELHLKVKLDP 165 (429)
Q Consensus 109 Gv~~~r~llG~~~v~ldl~~ae~kp~v~h~GWi~iGk~~~~~~k~~aelHl~Vr~Ep 165 (429)
+.+ ...+||.+.|+|+-- .. -...|..+-+... ..+...+|||.+..|-
T Consensus 99 ~~~-~~~~lG~~~i~l~~l--~~----~~~~w~~L~~~~~-~~~~~G~i~l~l~~e~ 147 (148)
T 3kwu_A 99 KRE-SDDFLGQTIIEVRTL--SG----EMDVWYNLDKRTD-KSAVSGAIRLHISVEI 147 (148)
T ss_dssp SSC-SSEEEEEEEEEGGGC--CS----EEEEEEECBCSST-TCCCCCEEEEEEEEEC
T ss_pred cCC-CCccEEEEEEEHHHC--cC----CCCEEEEcccCCC-CCCCceEEEEEEEEEe
Confidence 012 233899999999632 11 2468999975321 2234569999998874
No 6
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=61.06 E-value=23 Score=28.37 Aligned_cols=56 Identities=16% Similarity=0.382 Sum_probs=37.0
Q ss_pred ceEEEEEEecCCCcccccCCcceeEEEEEEeec-CCCCCCcceEEeeceeecCCCCcCCCCCCcEEEEEEeecC
Q 014188 93 AYLEVVVFTGRKGFHCGVGIKRHQIGTFKLEVG-PEWGEGKPIILFNGWIGIGKNKQETGKPGAELHLKVKLDP 165 (429)
Q Consensus 93 ~~L~v~Vy~Gr~G~~CGv~~~r~llG~~~v~ld-l~~ae~kp~v~h~GWi~iGk~~~~~~k~~aelHl~Vr~Ep 165 (429)
..|+|.||.-.. ++. ..+||.++|+|. +...... -+..|+.+- +..+|||.++.++
T Consensus 77 ~~L~~~V~d~d~-----~~~-dd~iG~~~i~l~~l~~~~~~---~~~~w~~L~--------~~G~i~l~l~~~~ 133 (136)
T 1gmi_A 77 RKIELAVFHDAP-----IGY-DDFVANCTIQFEELLQNGSR---HFEDWIDLE--------PEGKVYVIIDLSG 133 (136)
T ss_dssp CEEEEEEEECCS-----SSS-CEEEEEEEEEHHHHTSTTCS---EEEEEEECB--------SSCEEEEEEEEEE
T ss_pred CEEEEEEEeCCC-----CCC-CCEEEEEEEEHHHhcccCCC---CccEEEEcC--------CCeEEEEEEEEEe
Confidence 489999998543 222 338999999995 3322221 247799874 2458999987653
No 7
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=61.00 E-value=90 Score=27.70 Aligned_cols=110 Identities=15% Similarity=0.188 Sum_probs=58.6
Q ss_pred CceeEEEecCCCCcceeeeccccCCCCCCCCCCcceeeecCHHHHHHhhCCCCCCCCCceEEEEEEecCCCcccccCCcc
Q 014188 35 SPCLCEIRLRGFPVQTTQVPLVSSPEALPDIHSIASSFYLEESDLKALLTPGCFYSPHAYLEVVVFTGRKGFHCGVGIKR 114 (429)
Q Consensus 35 spC~C~IrL~~fP~qta~vPL~~~~~~~p~~~~~Aa~F~Ld~s~l~~l~~~~~f~~~~~~L~v~Vy~Gr~G~~CGv~~~r 114 (429)
+-.||+|.|..-..++..-..+.. ...|.- +-.-.|.+...++ . ...|+|.||.-.. ++...
T Consensus 40 ~dpyv~v~~~~~~~~~~~T~~~~~-~~nP~w-ne~f~f~v~~~~~---~--------~~~l~~~V~d~d~-----~~~~~ 101 (284)
T 2r83_A 40 SDPYVKVFLLPDKKKKFETKVHRK-TLNPVF-NEQFTFKVPYSEL---A--------GKTLVMAVYDFDR-----FSKHD 101 (284)
T ss_dssp CCEEEEEEEETCTTSCEECCCCCS-CSSCEE-EEEEEECCCGGGC---T--------TCEEEEEEEECCS-----SSCCC
T ss_pred CCeEEEEEEEcCCCceEeCCcccC-CCCCee-CceEEEEechHHh---C--------cCEEEEEEEECCC-----CCCCc
Confidence 446999999643333222222311 123321 1123344443321 1 2489999998543 22234
Q ss_pred eeEEEEEEeecCCCCCCcceEEeeceeecCCCCcCCCCCCcEEEEEEeecCCC
Q 014188 115 HQIGTFKLEVGPEWGEGKPIILFNGWIGIGKNKQETGKPGAELHLKVKLDPDP 167 (429)
Q Consensus 115 ~llG~~~v~ldl~~ae~kp~v~h~GWi~iGk~~~~~~k~~aelHl~Vr~EpDP 167 (429)
+||.+.|+|+-- ..++ ....|..+-...+...+...++++.++..|..
T Consensus 102 -~lG~~~i~l~~l-~~~~---~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p~~ 149 (284)
T 2r83_A 102 -IIGEFKVPMNTV-DFGH---VTEEWRDLQSAEKEEQEKLGDICFSLRYVPTA 149 (284)
T ss_dssp -EEEEEEEEGGGC-CCSS---CEEEEEECBCCSSCCCCCCCEEEEEEEEETTT
T ss_pred -eeEEEEEcchhc-ccCC---cceeEEEeeccccccccccccEEEEEEecCcC
Confidence 899999998631 1122 35689998543221222445888887766543
No 8
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=50.17 E-value=23 Score=28.10 Aligned_cols=97 Identities=19% Similarity=0.231 Sum_probs=55.9
Q ss_pred CceeEEEecCCCCcceeeeccccCCCCCCCCCCcceeeecCHHHHHHhhCCCCCCCCCceEEEEEEecCCCcccccCCcc
Q 014188 35 SPCLCEIRLRGFPVQTTQVPLVSSPEALPDIHSIASSFYLEESDLKALLTPGCFYSPHAYLEVVVFTGRKGFHCGVGIKR 114 (429)
Q Consensus 35 spC~C~IrL~~fP~qta~vPL~~~~~~~p~~~~~Aa~F~Ld~s~l~~l~~~~~f~~~~~~L~v~Vy~Gr~G~~CGv~~~r 114 (429)
+-.||+|++.+--.+|.. +.. ...|.= +-.-.|.+.+ . ...|+|.||.-... + ..
T Consensus 34 ~dpyv~v~~~~~~~kT~~---~~~-t~nP~w-ne~f~f~~~~--------~------~~~l~i~V~d~d~~-----~-~~ 88 (133)
T 2ep6_A 34 SDPFCLLELGNDRLQTHT---VYK-NLNPEW-NKVFTFPIKD--------I------HDVLEVTVFDEDGD-----K-PP 88 (133)
T ss_dssp CCEEEEEEETTEEEECCC---CSS-CSSCCC-CEEEEEEESC--------T------TCEEEEEEEEEETT-----E-EE
T ss_pred cCeEEEEEECCEEEEeee---ecC-CCCCcc-ccEEEEEecC--------C------CCEEEEEEEECCCC-----C-CC
Confidence 345999999874333332 211 233331 1233454431 1 25799999985542 1 23
Q ss_pred eeEEEEEEeecCCCCCCcceEEeeceeecCCCCcCCCCCCcEEEEEEee
Q 014188 115 HQIGTFKLEVGPEWGEGKPIILFNGWIGIGKNKQETGKPGAELHLKVKL 163 (429)
Q Consensus 115 ~llG~~~v~ldl~~ae~kp~v~h~GWi~iGk~~~~~~k~~aelHl~Vr~ 163 (429)
.+||.+.|+|.- -..+. ..|..+-.... .++...+|||.++.
T Consensus 89 ~~lG~~~i~l~~-l~~~~-----~~w~~L~~~~~-~~~~~G~i~l~i~~ 130 (133)
T 2ep6_A 89 DFLGKVAIPLLS-IRDGQ-----PNCYVLKNKDL-EQAFKGVIYLEMDL 130 (133)
T ss_dssp EECCBCEEEGGG-CCSSC-----CEECCCBCSCT-TSCCSSEEEEEEEE
T ss_pred CeeEEEEEEHHH-ccCCC-----ceEEEeecCCC-CCccceEEEEEEEE
Confidence 389999999963 22333 36988854221 22466799999875
No 9
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=47.17 E-value=11 Score=30.04 Aligned_cols=62 Identities=16% Similarity=0.262 Sum_probs=41.2
Q ss_pred CceEEEEEEecCCCcccccCCcceeEEEEEEeecCCCCCCcceEEeeceeecCCCCcCCCCCCcEEEEEEeecCC
Q 014188 92 HAYLEVVVFTGRKGFHCGVGIKRHQIGTFKLEVGPEWGEGKPIILFNGWIGIGKNKQETGKPGAELHLKVKLDPD 166 (429)
Q Consensus 92 ~~~L~v~Vy~Gr~G~~CGv~~~r~llG~~~v~ldl~~ae~kp~v~h~GWi~iGk~~~~~~k~~aelHl~Vr~EpD 166 (429)
...|+|.||.-.+. +... +||.++|+|.--...+ ..+..|..+-+ +++...+|||.++..|+
T Consensus 70 ~~~l~~~V~d~~~~-----~~d~-~lG~~~i~l~~l~~~~---~~~~~w~~L~~----~~~~~G~i~l~l~~~p~ 131 (136)
T 1wfj_A 70 TTELKAKIFDKDVG-----TEDD-AVGEATIPLEPVFVEG---SIPPTAYNVVK----DEEYKGEIWVALSFKPS 131 (136)
T ss_dssp CCEEEEEECCSSSC-----TTTC-CSEEEEEESHHHHHHS---EEEEEEEEEEE----TTEEEEEEEEEEEEEEC
T ss_pred CCEEEEEEEECCCC-----CCCc-eEEEEEEEHHHhccCC---CCCcEEEEeec----CCccCEEEEEEEEEEeC
Confidence 35899999985432 2234 8999999986211112 35678988852 22456799999988775
No 10
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.00 E-value=1.1e+02 Score=24.41 Aligned_cols=43 Identities=12% Similarity=0.124 Sum_probs=28.8
Q ss_pred ceEEEEEEecCCCcccccCCcceeEEEEEEeecCCCCCCcceEEeeceeecCC
Q 014188 93 AYLEVVVFTGRKGFHCGVGIKRHQIGTFKLEVGPEWGEGKPIILFNGWIGIGK 145 (429)
Q Consensus 93 ~~L~v~Vy~Gr~G~~CGv~~~r~llG~~~v~ldl~~ae~kp~v~h~GWi~iGk 145 (429)
..|+|.||.-.+. +... +||.+.|+|+- -..+. .+..|..+-.
T Consensus 93 ~~l~i~V~d~d~~-----~~~~-~iG~~~i~l~~-l~~~~---~~~~W~~L~~ 135 (141)
T 2d8k_A 93 RILYLQVLDYDRF-----SRND-PIGEVSIPLNK-VDLTQ---MQTFWKDLKP 135 (141)
T ss_dssp SEEEEEEEECCSS-----SSCE-EEEEEEEETTT-SCTTS---CEEEEECCEE
T ss_pred CEEEEEEEECCCC-----CCCc-EEEEEEEEhhh-hcCCC---CccEEEECcC
Confidence 4899999985442 2234 89999999862 12222 3678999854
No 11
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=44.56 E-value=25 Score=30.36 Aligned_cols=94 Identities=17% Similarity=0.267 Sum_probs=55.0
Q ss_pred CCceeEEEecCCCCc-ceeeeccccCCCCCCCCCCcceeeecCHHHHHHhhCCCCCCCCCceEEEEEEecCCCcccccCC
Q 014188 34 SSPCLCEIRLRGFPV-QTTQVPLVSSPEALPDIHSIASSFYLEESDLKALLTPGCFYSPHAYLEVVVFTGRKGFHCGVGI 112 (429)
Q Consensus 34 sspC~C~IrL~~fP~-qta~vPL~~~~~~~p~~~~~Aa~F~Ld~s~l~~l~~~~~f~~~~~~L~v~Vy~Gr~G~~CGv~~ 112 (429)
++-.||+|+|++... +|..++ ....|.= =-.|.++-. . ...|+|.||.-.. ++.
T Consensus 59 ~sDPYv~v~l~~~~~~kT~v~~----ktlnP~W---NE~F~f~v~-------~------~~~L~~~V~D~d~-----~~~ 113 (157)
T 2fk9_A 59 LLDPYLTVSVDQVRVGQTSTKQ----KTNKPTY---NEEFCANVT-------D------GGHLELAVFHETP-----LGY 113 (157)
T ss_dssp CCCEEEEEEETTEEEEECCCCS----SCSSCEE---EEEEEEEEE-------E------ECEEEEEEEECCS-----SSS
T ss_pred CCCeEEEEEECCEeeEEeeecC----CCCCCcc---CcEEEEEcC-------C------CCEEEEEEEECCC-----CCC
Confidence 355699999988654 443221 1223320 112433211 1 1389999998433 222
Q ss_pred cceeEEEEEEeec-CCCC--CCcceEEeeceeecCCCCcCCCCCCcEEEEEEeec
Q 014188 113 KRHQIGTFKLEVG-PEWG--EGKPIILFNGWIGIGKNKQETGKPGAELHLKVKLD 164 (429)
Q Consensus 113 ~r~llG~~~v~ld-l~~a--e~kp~v~h~GWi~iGk~~~~~~k~~aelHl~Vr~E 164 (429)
..+||++.|+|. +... ++ -.+..|+.+-. ..+|||.+..|
T Consensus 114 -dd~iG~~~i~l~~l~~~~~~~---~~~~~W~~L~~--------~G~i~l~l~~~ 156 (157)
T 2fk9_A 114 -DHFVANCTLQFQELLRTTGAS---DTFEGWVDLEP--------EGKVFVVITLT 156 (157)
T ss_dssp -CEEEEEEEEEHHHHHHHHTTC---SEEEEEEECBS--------SCEEEEEEEEC
T ss_pred -CCEEEEEEEEHHHhhcccCCC---CcccEEEECCC--------CcEEEEEEEEE
Confidence 338999999995 2221 12 24689999943 34999998875
No 12
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=36.23 E-value=80 Score=27.46 Aligned_cols=46 Identities=13% Similarity=0.372 Sum_probs=29.7
Q ss_pred EEEEeecCCCCCCcceEEeeceeecCCCC-cCCCCCCcEEEEEEeecCCCceE
Q 014188 119 TFKLEVGPEWGEGKPIILFNGWIGIGKNK-QETGKPGAELHLKVKLDPDPRYV 170 (429)
Q Consensus 119 ~~~v~ldl~~ae~kp~v~h~GWi~iGk~~-~~~~k~~aelHl~Vr~EpDPRyV 170 (429)
+++|.|..-+.++.-+.|. |++. +..+.+...|+++|+++|+|+|.
T Consensus 37 ~l~V~Ip~G~~~G~~ir~~------g~G~~~~~gg~~GDl~v~i~v~~h~~F~ 83 (170)
T 1c3g_A 37 QIDIQLKPGWKAGTKITYK------NQGDYNPQTGRRKTLQFVIQEKSHPNFK 83 (170)
T ss_dssp EEEEECCTTCCTTCEEEES------SCSSBCSSSSCBCEEEEEEEECCCSSEE
T ss_pred EEEEEeCCCccCCCEEEEe------ccccCCCCCCccccEEEEEEEccCCccE
Confidence 4566666666677666665 2321 22233557999999999999753
No 13
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=31.25 E-value=99 Score=27.10 Aligned_cols=46 Identities=24% Similarity=0.596 Sum_probs=29.9
Q ss_pred EEEEeecCCCCCCcceEEeeceeecCCCCc-CCCCCCcEEEEEEeecCCCceE
Q 014188 119 TFKLEVGPEWGEGKPIILFNGWIGIGKNKQ-ETGKPGAELHLKVKLDPDPRYV 170 (429)
Q Consensus 119 ~~~v~ldl~~ae~kp~v~h~GWi~iGk~~~-~~~k~~aelHl~Vr~EpDPRyV 170 (429)
+++|.|..-+.++.-+.|. |++.. ..+.+...|+++|++.|+|+|.
T Consensus 43 ~l~V~Ip~G~~~G~~ir~~------g~G~~g~~gg~~GDl~v~i~~~~h~~F~ 89 (180)
T 2q2g_A 43 IVEVEIKPGWKDGTKLTYS------GEGDQESPGTSPGDLVLIIQTKTHPRFT 89 (180)
T ss_dssp EEEEEECTTCCTTCEEEET------TCSCCSSTTSCCCEEEEEEEECCCSSCE
T ss_pred EEEEEECCCCcCCcEEEEe------eccCCCCCCCccccEEEEEEEEecccEE
Confidence 4666776677777666654 22211 1223556899999999999753
No 14
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=30.54 E-value=1.8e+02 Score=22.71 Aligned_cols=44 Identities=11% Similarity=0.213 Sum_probs=29.1
Q ss_pred ceEEEEEEecCCCcccccCCcceeEEEEEEeecCCCCCCcceEEeeceeecCC
Q 014188 93 AYLEVVVFTGRKGFHCGVGIKRHQIGTFKLEVGPEWGEGKPIILFNGWIGIGK 145 (429)
Q Consensus 93 ~~L~v~Vy~Gr~G~~CGv~~~r~llG~~~v~ldl~~ae~kp~v~h~GWi~iGk 145 (429)
..|+|.||.-..... ....+||.+.|+|+--..++ ...|..+-.
T Consensus 90 ~~l~i~V~d~d~~~~----~~~~~lG~~~i~l~~l~~~~-----~~~W~~L~~ 133 (141)
T 1v27_A 90 RMLEITLWDQARVRE----EESEFLGEILIELETALLDD-----EPHWYKLQT 133 (141)
T ss_dssp CEEEEEEEEBCSSSS----CCBCCCEEEEEEGGGCCCSS-----EEEEEECBC
T ss_pred CEEEEEEEECCCCcC----CCCceEEEEEEEccccCCCC-----CCceEECcc
Confidence 589999998554311 11348999999996322222 578999854
No 15
>4i21_C ERBB receptor feedback inhibitor 1; EGFR kinase domain, phosphotransfer, MIG6 peptide, ATP bindi transferase-transferase inhibitor complex; 3.37A {Homo sapiens} PDB: 2rf9_C
Probab=27.95 E-value=10 Score=29.92 Aligned_cols=19 Identities=47% Similarity=0.767 Sum_probs=10.2
Q ss_pred ecCCCceEEEeCCccccCceEEEeecCc
Q 014188 163 LDPDPRYVFQFEDVTMLSPQIVQLQGSI 190 (429)
Q Consensus 163 ~EpDPRyVFQFdgepecsPqV~QvqG~~ 190 (429)
.-+||.|| +|||+|-||+-
T Consensus 40 FA~dPkY~---------spkviq~q~se 58 (62)
T 4i21_C 40 FAPDPKYV---------SSKALQRQNSE 58 (62)
T ss_dssp CTTCTTTS---------CCCCC------
T ss_pred cccCcccc---------chhhhcccccc
Confidence 45788886 89999999864
No 16
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=27.62 E-value=1.7e+02 Score=23.08 Aligned_cols=44 Identities=18% Similarity=0.129 Sum_probs=28.6
Q ss_pred ceEEEEEEecCCCcccccCCcceeEEEEEEeec-CCCCCCcceEEeeceeecCCC
Q 014188 93 AYLEVVVFTGRKGFHCGVGIKRHQIGTFKLEVG-PEWGEGKPIILFNGWIGIGKN 146 (429)
Q Consensus 93 ~~L~v~Vy~Gr~G~~CGv~~~r~llG~~~v~ld-l~~ae~kp~v~h~GWi~iGk~ 146 (429)
..|+|.||.-.. ++... +||.+.|+|+ +....++ ..-|..+-++
T Consensus 90 ~~l~i~V~d~d~-----~~~~~-~lG~~~i~l~~l~~~~~~----~~~~~~l~~~ 134 (138)
T 1ugk_A 90 LALHFTILSFDR-----FSRDD-IIGEVLIPLSGIELSEGK----MLMNREIISG 134 (138)
T ss_dssp CEEEEEEEEECS-----SCCCC-CCEEEEEECTTCCCTTCC----EEEEEECBSS
T ss_pred CEEEEEEEECCC-----CCCCc-EEEEEEEehhHccCCCCc----chhhhhhhcC
Confidence 489999998443 12233 8999999996 3333332 2457887654
No 17
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=27.32 E-value=1.1e+02 Score=26.87 Aligned_cols=47 Identities=21% Similarity=0.369 Sum_probs=30.5
Q ss_pred EEEEEeecCCCCCCcceEEeeceeecCCCCcCCCCCCcEEEEEEeecCCCceE
Q 014188 118 GTFKLEVGPEWGEGKPIILFNGWIGIGKNKQETGKPGAELHLKVKLDPDPRYV 170 (429)
Q Consensus 118 G~~~v~ldl~~ae~kp~v~h~GWi~iGk~~~~~~k~~aelHl~Vr~EpDPRyV 170 (429)
-+++|.|..-+.+|.-+.|.+ ++....+.+...|+++|++.|+|+|-
T Consensus 43 ~~l~V~Ip~G~~~G~~ir~~G------~G~~~~~g~~GDl~v~i~~~~h~~F~ 89 (181)
T 3agx_A 43 KILTIEVKKGWKEGTKITFPK------EGDQTSNNIPADIVFVLKDKPHNIFK 89 (181)
T ss_dssp EEEEEEECTTCCTTCEEEETT------CSCCCSSSCCCCEEEEEEECCCSSCE
T ss_pred EEEEEEECCCccCCcEEEEee------ccccCCCCCcccEEEEEEEeccccce
Confidence 456677777777777676652 22111112456899999999999753
No 18
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=26.78 E-value=28 Score=34.54 Aligned_cols=23 Identities=17% Similarity=0.463 Sum_probs=17.8
Q ss_pred CCceEEEEeeCCCCCCCcccccch
Q 014188 267 NPGAWLIVRPDACRAESWQPWGKL 290 (429)
Q Consensus 267 NPGAWLIlRP~~~~~~sWkPWGRL 290 (429)
-|.+|+|.|=.+. ..||+||.-.
T Consensus 125 rP~~m~Iers~d~-G~tw~p~qyf 147 (375)
T 4aqt_A 125 RPESFAIYKRTRE-DGPWIPYQYY 147 (375)
T ss_dssp CCSEEEEEEESSS-SSCCEEEEEE
T ss_pred CCCcEEEEEecCC-CCCccceeee
Confidence 4999999997543 3589999764
No 19
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=26.23 E-value=30 Score=34.32 Aligned_cols=23 Identities=17% Similarity=0.469 Sum_probs=17.8
Q ss_pred CCceEEEEeeCCCCCCCcccccch
Q 014188 267 NPGAWLIVRPDACRAESWQPWGKL 290 (429)
Q Consensus 267 NPGAWLIlRP~~~~~~sWkPWGRL 290 (429)
-|++|+|-|-.+. ..||+||.-.
T Consensus 128 RP~sm~ierS~D~-G~tW~P~QYf 150 (338)
T 3tbd_A 128 RPTVMVLEKSLDN-GRTWQPYQFY 150 (338)
T ss_dssp CCSEEEEEEESST-TSSCEEEEEE
T ss_pred CCCeEEEEeccCC-CCCceeehhh
Confidence 4999999998553 2589999654
No 20
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=25.87 E-value=28 Score=35.13 Aligned_cols=24 Identities=25% Similarity=0.783 Sum_probs=18.8
Q ss_pred CCceEEEEeeCCCCCCCcccccchh
Q 014188 267 NPGAWLIVRPDACRAESWQPWGKLE 291 (429)
Q Consensus 267 NPGAWLIlRP~~~~~~sWkPWGRLE 291 (429)
-|++|+|-|-.+. ..||+||.-+-
T Consensus 132 RP~~m~ierS~D~-G~tW~p~qyfa 155 (403)
T 2y38_A 132 RPDLWVLERSTDF-GHTYQPWQFFA 155 (403)
T ss_dssp CCSEEEEEEESSS-SSSEEEEEEEC
T ss_pred CCCeEEEEeccCC-CCCccceeccc
Confidence 5899999997542 36899998763
No 21
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=25.78 E-value=31 Score=34.56 Aligned_cols=23 Identities=26% Similarity=0.546 Sum_probs=18.1
Q ss_pred CCceEEEEeeCCCCCCCcccccch
Q 014188 267 NPGAWLIVRPDACRAESWQPWGKL 290 (429)
Q Consensus 267 NPGAWLIlRP~~~~~~sWkPWGRL 290 (429)
-|++|+|-|=.+. ..||+||.-.
T Consensus 127 rP~~~~ieks~d~-g~tw~p~qy~ 149 (525)
T 4aqs_A 127 RPAAMLIERSSDF-GKAWGVYRYF 149 (525)
T ss_dssp CCSEEEEEEESST-TSSCEEEEEE
T ss_pred CCCeEEEEEecCC-CCCCcceeee
Confidence 5999999997542 3699999866
No 22
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=25.54 E-value=1.1e+02 Score=23.76 Aligned_cols=42 Identities=12% Similarity=0.230 Sum_probs=25.3
Q ss_pred ceEEEEEEecCCCcccccCCcceeEEEEEEeecCCCCCCcceEEeeceeec
Q 014188 93 AYLEVVVFTGRKGFHCGVGIKRHQIGTFKLEVGPEWGEGKPIILFNGWIGI 143 (429)
Q Consensus 93 ~~L~v~Vy~Gr~G~~CGv~~~r~llG~~~v~ldl~~ae~kp~v~h~GWi~i 143 (429)
..|+|.||.-..... ....+||.+.|+|+--..++ +.+|..+
T Consensus 87 ~~l~~~V~d~d~~~~----~~~~~lG~~~i~l~~l~~~~-----~~~W~~L 128 (129)
T 2bwq_A 87 RMLEITLWDQARVRE----EESEFLGEILIELETALLDD-----EPHWYKL 128 (129)
T ss_dssp CEEEEEEEEC-----------CEEEEEEEEEGGGCCCSS-----CEEEEEC
T ss_pred CeEEEEEEECCcCcC----cCCceeEEEEEEccccCCCc-----CCccEEC
Confidence 489999998554211 11348999999996322222 6788764
No 23
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=25.12 E-value=1.1e+02 Score=28.21 Aligned_cols=47 Identities=17% Similarity=0.325 Sum_probs=29.4
Q ss_pred EEEEEeecCCCCCCcceEEeeceeecCCCCcCCCCCCcEEEEEEeecCCCceE
Q 014188 118 GTFKLEVGPEWGEGKPIILFNGWIGIGKNKQETGKPGAELHLKVKLDPDPRYV 170 (429)
Q Consensus 118 G~~~v~ldl~~ae~kp~v~h~GWi~iGk~~~~~~k~~aelHl~Vr~EpDPRyV 170 (429)
=+++|.|..-+.++.-+.|. |+.....+.+...|++.|++.|+|+|.
T Consensus 112 ~~l~V~Ip~G~~~G~~ir~~------g~G~~~~~g~~GDl~v~i~v~~h~~F~ 158 (248)
T 1nlt_A 112 KILEVHVEPGMKDGQRIVFK------GEADQAPDVIPGDVVFIVSERPHKSFK 158 (248)
T ss_dssp EEEEEEECTTCCTTCEEEET------TCSCCCTTCBCCCEEEEEEECCCSSCE
T ss_pred EEEEEEECCCccCCCEEEEe------eeecCCCCCCcceEEEEEEEecCccce
Confidence 35666666667777666664 222111112456899999999999854
No 24
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=25.01 E-value=32 Score=35.05 Aligned_cols=23 Identities=17% Similarity=0.533 Sum_probs=17.6
Q ss_pred CCceEEEEeeCCCCCCCcccccch
Q 014188 267 NPGAWLIVRPDACRAESWQPWGKL 290 (429)
Q Consensus 267 NPGAWLIlRP~~~~~~sWkPWGRL 290 (429)
-|++|+|-|-.+. ..||+||.-.
T Consensus 156 RP~am~ierS~D~-G~tW~p~qYf 178 (426)
T 3zyj_B 156 RPDQMILEKSLDY-GRTWQPYQYY 178 (426)
T ss_dssp CCSEEEEEEESST-TSSCEEEEEE
T ss_pred CCCeEEEEeccCC-CCCceehHHH
Confidence 5999999997542 3689999644
No 25
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=20.99 E-value=3.2e+02 Score=21.74 Aligned_cols=84 Identities=12% Similarity=0.100 Sum_probs=46.6
Q ss_pred CceeEEEecCC-----CCcceeeeccccCCCCCCCCCCcceeee-cCHHHHHHhhCCCCCCCCCceEEEEEEecCCCccc
Q 014188 35 SPCLCEIRLRG-----FPVQTTQVPLVSSPEALPDIHSIASSFY-LEESDLKALLTPGCFYSPHAYLEVVVFTGRKGFHC 108 (429)
Q Consensus 35 spC~C~IrL~~-----fP~qta~vPL~~~~~~~p~~~~~Aa~F~-Ld~s~l~~l~~~~~f~~~~~~L~v~Vy~Gr~G~~C 108 (429)
+-.||+|.|.. --.+|..+. ....|.- +-.-.|. +...+| .. ..|+|.||.-..
T Consensus 40 ~DPyv~v~l~~~~~~~~~~kT~v~~----~t~nP~w-nE~f~f~~v~~~~l---~~--------~~L~~~V~d~d~---- 99 (134)
T 2b3r_A 40 PNPYVKTYLLPDTHKTSKRKTKISR----KTRNPTF-NEMLVYSGYSKETL---RQ--------RELQLSVLSAES---- 99 (134)
T ss_dssp CCEEEEEEEESCSSSCCCEECCCCC----SCSSCEE-EEEEEEESCCHHHH---TT--------CEEEEEEEECCS----
T ss_pred CCeEEEEEEEcCCCCCceecCCcCc----CCCCCCC-ccEEEECCcCHHHh---Cc--------CEEEEEEEECCC----
Confidence 34599999832 222333322 1122321 1234566 666655 22 489999998543
Q ss_pred ccCCcceeEEEEEEeecCCCCCCcceEEeeceeecC
Q 014188 109 GVGIKRHQIGTFKLEVGPEWGEGKPIILFNGWIGIG 144 (429)
Q Consensus 109 Gv~~~r~llG~~~v~ldl~~ae~kp~v~h~GWi~iG 144 (429)
++ ...+||.+.|+|+-- ..+.+ +.+|..+-
T Consensus 100 -~~-~~~~lG~~~i~l~~l-~~~~~---~~~W~~L~ 129 (134)
T 2b3r_A 100 -LR-ENFFLGGITLPLKDF-NLSKE---TVKWYQLT 129 (134)
T ss_dssp -SS-CCEEEEEEEEEGGGS-CTTSC---EEEEEECB
T ss_pred -CC-CCcEEEEEEEEhhhc-cCCCC---cceeEECC
Confidence 12 234899999999632 22222 47898874
No 26
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=20.84 E-value=3.3e+02 Score=21.91 Aligned_cols=87 Identities=16% Similarity=0.149 Sum_probs=47.4
Q ss_pred CceeEEEecCCCCcceeeeccccCCCCCCCCCCcceeeecCHHHHHHhhCCCCCCCCCceEEEEEEecCCCcccccCCcc
Q 014188 35 SPCLCEIRLRGFPVQTTQVPLVSSPEALPDIHSIASSFYLEESDLKALLTPGCFYSPHAYLEVVVFTGRKGFHCGVGIKR 114 (429)
Q Consensus 35 spC~C~IrL~~fP~qta~vPL~~~~~~~p~~~~~Aa~F~Ld~s~l~~l~~~~~f~~~~~~L~v~Vy~Gr~G~~CGv~~~r 114 (429)
+-.||+|.|..-..++..-..+.. ...|.- +-.-.|.+...+|. . ..|+|.||.-.+. +...
T Consensus 63 ~dpyv~v~~~~~~~~~~kT~v~~~-t~nP~w-ne~f~f~v~~~~l~---~--------~~L~i~V~d~d~~-----~~~~ 124 (152)
T 1rsy_A 63 SDPYVKVFLLPDKKKKFETKVHRK-TLNPVF-NEQFTFKVPYSELG---G--------KTLVMAVYDFDRF-----SKHD 124 (152)
T ss_dssp CCEEEEEEEETTCCSCEECCCCTT-CSSCEE-EEEEEECCCHHHHT---T--------CEEEEEEEECCSS-----SCCE
T ss_pred cCeEEEEEEEcCCCceEeccccCC-CCCCcC-cccEEEeecHHHcC---C--------CEEEEEEEECCCC-----CCCc
Confidence 346999999422222222222211 123321 22345666666552 2 4899999985432 2233
Q ss_pred eeEEEEEEeecCCCCCCcceEEeeceeecC
Q 014188 115 HQIGTFKLEVGPEWGEGKPIILFNGWIGIG 144 (429)
Q Consensus 115 ~llG~~~v~ldl~~ae~kp~v~h~GWi~iG 144 (429)
+||.+.|+|+- -..+. .+..|..+-
T Consensus 125 -~iG~~~i~l~~-l~~~~---~~~~W~~L~ 149 (152)
T 1rsy_A 125 -IIGEFKVPMNT-VDFGH---VTEEWRDLQ 149 (152)
T ss_dssp -EEEEEEEEGGG-CCCSS---CEEEEEECB
T ss_pred -EEEEEEEEchh-ccCCC---CcceEEECC
Confidence 89999999962 12222 356888773
No 27
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=20.26 E-value=48 Score=26.83 Aligned_cols=42 Identities=10% Similarity=0.228 Sum_probs=28.0
Q ss_pred ceEEEEEEecCCCcccccCCcceeEEEEEEeec-CCCCCCcceEEeeceeecCC
Q 014188 93 AYLEVVVFTGRKGFHCGVGIKRHQIGTFKLEVG-PEWGEGKPIILFNGWIGIGK 145 (429)
Q Consensus 93 ~~L~v~Vy~Gr~G~~CGv~~~r~llG~~~v~ld-l~~ae~kp~v~h~GWi~iGk 145 (429)
..|+|.||.-.+ ++ ...+||.+.|+|+ +.... -+..|..+-.
T Consensus 92 ~~L~~~V~d~d~-----~~-~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~ 134 (148)
T 3fdw_A 92 RTLQFSVWHHGR-----FG-RNTFLGEAEIQMDSWKLDK-----KLDHCLPLHG 134 (148)
T ss_dssp CEEEEEEEEECG-----GG-CEEEEEEEEEEHHHHHHHC-----CSEEEEECBC
T ss_pred eEEEEEEEECCC-----Cc-CCcEEEEEEEEcccccccC-----CccceEECcC
Confidence 479999997433 22 2348999999996 32222 2468999954
Done!