BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014189
(429 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/285 (37%), Positives = 160/285 (56%), Gaps = 13/285 (4%)
Query: 111 TANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFL 170
T NF ++ VYKG LR+G + VA+K ++S QG E+ E+ L
Sbjct: 38 TNNFDHKFLIGHGVFGKVYKGV----LRDGAK---VALKRRTPESS-QGIEEFETEIETL 89
Query: 171 GHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVL--LPLPWSIRMKIAFGAA 228
HP+LV LIG+C E +LIY++M G+++ +L+ L + + W R++I GAA
Sbjct: 90 SFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAA 149
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGY 288
+GL +LH + +I+RD K+ NILLD ++ K++DFG++K G E D++H+ + GT GY
Sbjct: 150 RGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGY 207
Query: 289 AAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXXXXX 348
PEY + G LT +SDVYSFGVVL E+L R ++ +S P NLA+WA
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWA-VESHNNGQLE 266
Query: 349 NIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVDSLE 393
I+DP L + + K A CL + + RP M D++ LE
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/285 (37%), Positives = 159/285 (55%), Gaps = 13/285 (4%)
Query: 111 TANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFL 170
T NF ++ VYKG LR+G + VA+K ++S QG E+ E+ L
Sbjct: 38 TNNFDHKFLIGHGVFGKVYKGV----LRDGAK---VALKRRTPESS-QGIEEFETEIETL 89
Query: 171 GHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVL--LPLPWSIRMKIAFGAA 228
HP+LV LIG+C E +LIY++M G+++ +L+ L + + W R++I GAA
Sbjct: 90 SFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAA 149
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGY 288
+GL +LH + +I+RD K+ NILLD ++ K++DFG++K G E ++H+ + GT GY
Sbjct: 150 RGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGY 207
Query: 289 AAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXXXXX 348
PEY + G LT +SDVYSFGVVL E+L R ++ +S P NLA+WA
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWA-VESHNNGQLE 266
Query: 349 NIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVDSLE 393
I+DP L + + K A CL + + RP M D++ LE
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 162/300 (54%), Gaps = 14/300 (4%)
Query: 99 LIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQ 158
L F+ EL++ + NF +L VYKG +++ VAVK +
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADG-------TLVAVKRLKEERXQG 77
Query: 159 GHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSK--VLLPLP 216
G ++ EV + H NL++L G+C R+L+Y +MA GSV + L + PL
Sbjct: 78 GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLD 137
Query: 217 WSIRMKIAFGAAKGLAFLHEAEKP-VIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDK 275
W R +IA G+A+GLA+LH+ P +I+RD K +NILLD ++ A + DFGLAK D
Sbjct: 138 WPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD- 196
Query: 276 SHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQN--L 333
HV + GT G+ APEY+ TG + ++DV+ +GV+LLE++TG+++ D +R A + + L
Sbjct: 197 XHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 256
Query: 334 ADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVDSLE 393
DW ++D L+G+Y + V + +A C +P RP M ++V LE
Sbjct: 257 LDWVKGLLKEKKLEA-LVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 162/300 (54%), Gaps = 14/300 (4%)
Query: 99 LIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQ 158
L F+ EL++ + NF +L VYKG +++ VAVK + +
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADG-------XLVAVKRLKEERTQG 69
Query: 159 GHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSK--VLLPLP 216
G ++ EV + H NL++L G+C R+L+Y +MA GSV + L + PL
Sbjct: 70 GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLD 129
Query: 217 WSIRMKIAFGAAKGLAFLHEAEKP-VIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDK 275
W R +IA G+A+GLA+LH+ P +I+RD K +NILLD ++ A + DFGLAK D
Sbjct: 130 WPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD- 188
Query: 276 SHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQN--L 333
HV + G G+ APEY+ TG + ++DV+ +GV+LLE++TG+++ D +R A + + L
Sbjct: 189 XHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 248
Query: 334 ADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVDSLE 393
DW ++D L+G+Y + V + +A C +P RP M ++V LE
Sbjct: 249 LDWVKGLLKEKKLEA-LVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 160/302 (52%), Gaps = 18/302 (5%)
Query: 101 AFTYDELRIITANFRQDRV------LXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGD 154
+F++ EL+ +T NF + + + VYKG+++ + ++ + V +
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDI---- 68
Query: 155 NSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS-KVLL 213
+ + +++ E+ + H NLV+L+G+ + + L+Y +M GS+ + L
Sbjct: 69 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 128
Query: 214 PLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEG 273
PL W +R KIA GAA G+ FLHE I+RD K++NILLD + AK+SDFGLA+ +
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 274 DKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNL 333
++ + +RI+GT Y APE + G +TP+SD+YSFGVVLLEI+TG ++D+ R Q L
Sbjct: 187 AQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR--EPQLL 243
Query: 334 ADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVDSLE 393
D + ID ++ D V +A CL+ RP ++ + L+
Sbjct: 244 LDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
Query: 394 PL 395
+
Sbjct: 303 EM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 159/302 (52%), Gaps = 18/302 (5%)
Query: 101 AFTYDELRIITANFRQDRV------LXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGD 154
+F++ EL+ +T NF + + + VYKG+++ + ++ + V +
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDI---- 68
Query: 155 NSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS-KVLL 213
+ + +++ E+ + H NLV+L+G+ + + L+Y +M GS+ + L
Sbjct: 69 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 128
Query: 214 PLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEG 273
PL W +R KIA GAA G+ FLHE I+RD K++NILLD + AK+SDFGLA+ +
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 274 DKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNL 333
++ + RI+GT Y APE + G +TP+SD+YSFGVVLLEI+TG ++D+ R Q L
Sbjct: 187 AQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR--EPQLL 243
Query: 334 ADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVDSLE 393
D + ID ++ D V +A CL+ RP ++ + L+
Sbjct: 244 LDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
Query: 394 PL 395
+
Sbjct: 303 EM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 158/302 (52%), Gaps = 18/302 (5%)
Query: 101 AFTYDELRIITANFRQDRV------LXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGD 154
+F++ EL+ +T NF + + + VYKG+++ + ++ + V +
Sbjct: 8 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDI---- 62
Query: 155 NSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS-KVLL 213
+ + +++ E+ + H NLV+L+G+ + + L+Y +M GS+ + L
Sbjct: 63 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 122
Query: 214 PLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEG 273
PL W +R KIA GAA G+ FLHE I+RD K++NILLD + AK+SDFGLA+ +
Sbjct: 123 PLSWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDFGLARASEKF 180
Query: 274 DKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNL 333
+ + RI+GT Y APE + G +TP+SD+YSFGVVLLEI+TG ++D+ R Q L
Sbjct: 181 AQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR--EPQLL 237
Query: 334 ADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVDSLE 393
D + ID ++ D V +A CL+ RP ++ + L+
Sbjct: 238 LDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
Query: 394 PL 395
+
Sbjct: 297 EM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 153/300 (51%), Gaps = 18/300 (6%)
Query: 101 AFTYDELRIITANFRQDRVLXXXXXX------CVYKGFISEDLREGLQPVPVAVKVHDGD 154
+F++ EL+ +T NF + + VYKG+++ + ++ + V +
Sbjct: 5 SFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVN-NTTVAVKKLAAMVDI---- 59
Query: 155 NSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS-KVLL 213
+ + +++ E+ H NLV+L+G+ + + L+Y + GS+ + L
Sbjct: 60 TTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP 119
Query: 214 PLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEG 273
PL W R KIA GAA G+ FLHE I+RD K++NILLD + AK+SDFGLA+ +
Sbjct: 120 PLSWHXRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDFGLARASEKF 177
Query: 274 DKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNL 333
+ +RI+GT Y APE + G +TP+SD+YSFGVVLLEI+TG ++D+ R Q L
Sbjct: 178 AQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR--EPQLL 234
Query: 334 ADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVDSLE 393
D + ID + D V +A CL+ RP ++ + L+
Sbjct: 235 LDIKEEIEDEEKTIEDYIDKK-XNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 117/252 (46%), Gaps = 20/252 (7%)
Query: 146 VAVKV-HDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVE 204
VAVK+ + D + E+L EV + L HPN+V +G + + ++ E+++RGS+
Sbjct: 63 VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY 122
Query: 205 NNLF-SKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
L S L R+ +A+ AKG+ +LH P+++RD K+ N+L+D Y K+ D
Sbjct: 123 RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCD 182
Query: 264 FGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLD 323
FGL++ + S GT + APE + +SDVYSFGV+L E+ T ++
Sbjct: 183 FGLSR--LKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWG 240
Query: 324 KSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARP 383
PA+ RLE P + A + C + P RP
Sbjct: 241 NLNPAQ--------------VVAAVGFKCKRLE--IPRNLNPQVAAIIEGCWTNEPWKRP 284
Query: 384 LMRDIVDSLEPL 395
I+D L PL
Sbjct: 285 SFATIMDLLRPL 296
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 117/252 (46%), Gaps = 20/252 (7%)
Query: 146 VAVKV-HDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVE 204
VAVK+ + D + E+L EV + L HPN+V +G + + ++ E+++RGS+
Sbjct: 63 VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY 122
Query: 205 NNLF-SKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
L S L R+ +A+ AKG+ +LH P+++R+ K+ N+L+D Y K+ D
Sbjct: 123 RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCD 182
Query: 264 FGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLD 323
FGL++ + S GT + APE + +SDVYSFGV+L E+ T ++
Sbjct: 183 FGLSR--LKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWG 240
Query: 324 KSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARP 383
PA+ RLE P + A + C + P RP
Sbjct: 241 NLNPAQ--------------VVAAVGFKCKRLE--IPRNLNPQVAAIIEGCWTNEPWKRP 284
Query: 384 LMRDIVDSLEPL 395
I+D L PL
Sbjct: 285 SFATIMDLLRPL 296
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 103/203 (50%), Gaps = 27/203 (13%)
Query: 128 VYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWL-AEVIFLGHLSHPNLVKLIGYCC 186
VY+ F D V V HD D E + E L HPN++ L G C
Sbjct: 23 VYRAFWIGD------EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCL 76
Query: 187 EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLH-EAEKPVIYRD 245
++ + L+ EF ARG N + S +P I + A A+G+ +LH EA P+I+RD
Sbjct: 77 KEPNLCLVMEF-ARGGPLNRVLSGKRIPP--DILVNWAVQIARGMNYLHDEAIVPIIHRD 133
Query: 246 FKTSNILL-----DTDYN---AKLSDFGLAKDGPEGDKSHVSTRI--MGTYGYAAPEYIM 295
K+SNIL+ + D + K++DFGLA++ H +T++ G Y + APE I
Sbjct: 134 LKSSNILILQKVENGDLSNKILKITDFGLAREW------HRTTKMSAAGAYAWMAPEVIR 187
Query: 296 TGHLTPRSDVYSFGVVLLEILTG 318
+ SDV+S+GV+L E+LTG
Sbjct: 188 ASMFSKGSDVWSYGVLLWELLTG 210
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 124/288 (43%), Gaps = 34/288 (11%)
Query: 128 VYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCE 187
VYKG + G + VPVA+K + + ++L E +G SH N+++L G +
Sbjct: 60 VYKGMLKTS--SGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK 117
Query: 188 DEHRVLIYEFMARGSVENNLFSK----VLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIY 243
+ ++I E+M G+++ L K +L L +R G A G+ +L A ++
Sbjct: 118 YKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR-----GIAAGMKYL--ANMNYVH 170
Query: 244 RDFKTSNILLDTDYNAKLSDFGLAK---DGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLT 300
RD NIL++++ K+SDFGL++ D PE + +I + APE I T
Sbjct: 171 RDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI--PIRWTAPEAISYRKFT 228
Query: 301 PRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYP 360
SDV+SFG+V+ E++T RP E + I+ P
Sbjct: 229 SASDVWSFGIVMWEVMT-----YGERPYWELS-----------NHEVMKAINDGFRLPTP 272
Query: 361 VKGVHKAAMLAYHCLNHNPKARPLMRDIVDSLEPLQVLPDEAPTPKNF 408
+ L C RP DIV L+ L PD T +F
Sbjct: 273 MDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTLADF 320
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 102/196 (52%), Gaps = 13/196 (6%)
Query: 127 CVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCC 186
CVY G + ++ +G + + AVK + ++L E I + SHPN++ L+G C
Sbjct: 43 CVYHGTLLDN--DG-KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL 99
Query: 187 EDEHR-VLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFG--AAKGLAFLHEAEKPVIY 243
E +++ +M G + N + ++ P +++ I FG AKG+ FL A K ++
Sbjct: 100 RSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKFL--ASKKFVH 154
Query: 244 RDFKTSNILLDTDYNAKLSDFGLAKD--GPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTP 301
RD N +LD + K++DFGLA+D E D H T + A E + T T
Sbjct: 155 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 214
Query: 302 RSDVYSFGVVLLEILT 317
+SDV+SFGV+L E++T
Sbjct: 215 KSDVWSFGVLLWELMT 230
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 102/196 (52%), Gaps = 13/196 (6%)
Query: 127 CVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCC 186
CVY G + ++ +G + + AVK + ++L E I + SHPN++ L+G C
Sbjct: 46 CVYHGTLLDN--DG-KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL 102
Query: 187 EDEHR-VLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFG--AAKGLAFLHEAEKPVIY 243
E +++ +M G + N + ++ P +++ I FG AKG+ FL A K ++
Sbjct: 103 RSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKFL--ASKKFVH 157
Query: 244 RDFKTSNILLDTDYNAKLSDFGLAKD--GPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTP 301
RD N +LD + K++DFGLA+D E D H T + A E + T T
Sbjct: 158 RDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 217
Query: 302 RSDVYSFGVVLLEILT 317
+SDV+SFGV+L E++T
Sbjct: 218 KSDVWSFGVLLWELMT 233
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 102/196 (52%), Gaps = 13/196 (6%)
Query: 127 CVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCC 186
CVY G + ++ +G + + AVK + ++L E I + SHPN++ L+G C
Sbjct: 45 CVYHGTLLDN--DG-KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL 101
Query: 187 EDEHR-VLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFG--AAKGLAFLHEAEKPVIY 243
E +++ +M G + N + ++ P +++ I FG AKG+ FL A K ++
Sbjct: 102 RSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKFL--ASKKFVH 156
Query: 244 RDFKTSNILLDTDYNAKLSDFGLAKD--GPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTP 301
RD N +LD + K++DFGLA+D E D H T + A E + T T
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 216
Query: 302 RSDVYSFGVVLLEILT 317
+SDV+SFGV+L E++T
Sbjct: 217 KSDVWSFGVLLWELMT 232
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 92/171 (53%), Gaps = 15/171 (8%)
Query: 161 REWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIR 220
+E+ EV + +L+HPN+VKL G V+ EF+ G + + L K P+ WS++
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLLDKAH-PIKWSVK 124
Query: 221 MKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT-DYN----AKLSDFGLAKDGPEGDK 275
+++ A G+ ++ P+++RD ++ NI L + D N AK++DFGL++
Sbjct: 125 LRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QS 179
Query: 276 SHVSTRIMGTYGYAAPEYIMTGH--LTPRSDVYSFGVVLLEILTGRKSLDK 324
H + ++G + + APE I T ++D YSF ++L ILTG D+
Sbjct: 180 VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 102/196 (52%), Gaps = 13/196 (6%)
Query: 127 CVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCC 186
CVY G + ++ +G + + AVK + ++L E I + SHPN++ L+G C
Sbjct: 104 CVYHGTLLDN--DG-KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL 160
Query: 187 EDEHR-VLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFG--AAKGLAFLHEAEKPVIY 243
E +++ +M G + N + ++ P +++ I FG AKG+ FL A K ++
Sbjct: 161 RSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKFL--ASKKFVH 215
Query: 244 RDFKTSNILLDTDYNAKLSDFGLAKD--GPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTP 301
RD N +LD + K++DFGLA+D E D H T + A E + T T
Sbjct: 216 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 275
Query: 302 RSDVYSFGVVLLEILT 317
+SDV+SFGV+L E++T
Sbjct: 276 KSDVWSFGVLLWELMT 291
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 102/196 (52%), Gaps = 13/196 (6%)
Query: 127 CVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCC 186
CVY G + ++ +G + + AVK + ++L E I + SHPN++ L+G C
Sbjct: 50 CVYHGTLLDN--DG-KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL 106
Query: 187 EDEHR-VLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFG--AAKGLAFLHEAEKPVIY 243
E +++ +M G + N + ++ P +++ I FG AKG+ FL A K ++
Sbjct: 107 RSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKFL--ASKKFVH 161
Query: 244 RDFKTSNILLDTDYNAKLSDFGLAKD--GPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTP 301
RD N +LD + K++DFGLA+D E D H T + A E + T T
Sbjct: 162 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 221
Query: 302 RSDVYSFGVVLLEILT 317
+SDV+SFGV+L E++T
Sbjct: 222 KSDVWSFGVLLWELMT 237
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 102/196 (52%), Gaps = 13/196 (6%)
Query: 127 CVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCC 186
CVY G + ++ +G + + AVK + ++L E I + SHPN++ L+G C
Sbjct: 46 CVYHGTLLDN--DG-KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL 102
Query: 187 EDEHR-VLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFG--AAKGLAFLHEAEKPVIY 243
E +++ +M G + N + ++ P +++ I FG AKG+ FL A K ++
Sbjct: 103 RSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKFL--ASKKFVH 157
Query: 244 RDFKTSNILLDTDYNAKLSDFGLAKD--GPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTP 301
RD N +LD + K++DFGLA+D E D H T + A E + T T
Sbjct: 158 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 217
Query: 302 RSDVYSFGVVLLEILT 317
+SDV+SFGV+L E++T
Sbjct: 218 KSDVWSFGVLLWELMT 233
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 102/196 (52%), Gaps = 13/196 (6%)
Query: 127 CVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCC 186
CVY G + ++ +G + + AVK + ++L E I + SHPN++ L+G C
Sbjct: 45 CVYHGTLLDN--DG-KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL 101
Query: 187 EDEHR-VLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFG--AAKGLAFLHEAEKPVIY 243
E +++ +M G + N + ++ P +++ I FG AKG+ FL A K ++
Sbjct: 102 RSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKFL--ASKKFVH 156
Query: 244 RDFKTSNILLDTDYNAKLSDFGLAKD--GPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTP 301
RD N +LD + K++DFGLA+D E D H T + A E + T T
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 216
Query: 302 RSDVYSFGVVLLEILT 317
+SDV+SFGV+L E++T
Sbjct: 217 KSDVWSFGVLLWELMT 232
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 91/171 (53%), Gaps = 15/171 (8%)
Query: 161 REWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIR 220
+E+ EV + +L+HPN+VKL G V+ EF+ G + + L K P+ WS++
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLLDKAH-PIKWSVK 124
Query: 221 MKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT-DYN----AKLSDFGLAKDGPEGDK 275
+++ A G+ ++ P+++RD ++ NI L + D N AK++DFG ++
Sbjct: 125 LRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QS 179
Query: 276 SHVSTRIMGTYGYAAPEYIMTGH--LTPRSDVYSFGVVLLEILTGRKSLDK 324
H + ++G + + APE I T ++D YSF ++L ILTG D+
Sbjct: 180 VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 91/171 (53%), Gaps = 15/171 (8%)
Query: 161 REWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIR 220
+E+ EV + +L+HPN+VKL G V+ EF+ G + + L K P+ WS++
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLLDKAH-PIKWSVK 124
Query: 221 MKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT-DYN----AKLSDFGLAKDGPEGDK 275
+++ A G+ ++ P+++RD ++ NI L + D N AK++DF L++
Sbjct: 125 LRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QS 179
Query: 276 SHVSTRIMGTYGYAAPEYIMTGH--LTPRSDVYSFGVVLLEILTGRKSLDK 324
H + ++G + + APE I T ++D YSF ++L ILTG D+
Sbjct: 180 VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 127 CVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCC 186
CVY G + ++ +G + + AVK + ++L E I + SHPN++ L+G C
Sbjct: 44 CVYHGTLLDN--DG-KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL 100
Query: 187 EDEHR-VLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFG--AAKGLAFLHEAEKPVIY 243
E +++ +M G + N + ++ P +++ I FG AKG+ +L A K ++
Sbjct: 101 RSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL--ASKKFVH 155
Query: 244 RDFKTSNILLDTDYNAKLSDFGLAKD--GPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTP 301
RD N +LD + K++DFGLA+D E H T + A E + T T
Sbjct: 156 RDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTT 215
Query: 302 RSDVYSFGVVLLEILT 317
+SDV+SFGV+L E++T
Sbjct: 216 KSDVWSFGVLLWELMT 231
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 16/185 (8%)
Query: 140 GLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMA 199
G + VPVA+K + + R++L+E +G HPN+++L G +++ E+M
Sbjct: 74 GQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYME 133
Query: 200 RGSVENNLFSK----VLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT 255
GS++ L + ++ L +R G G+ +L ++ ++RD N+L+D+
Sbjct: 134 NGSLDTFLRTHDGQFTIMQLVGMLR-----GVGAGMRYL--SDLGYVHRDLAARNVLVDS 186
Query: 256 DYNAKLSDFGLAK---DGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
+ K+SDFGL++ D P+ + +I + APE I + SDV+SFGVV+
Sbjct: 187 NLVCKVSDFGLSRVLEDDPDAAXTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVM 244
Query: 313 LEILT 317
E+L
Sbjct: 245 WEVLA 249
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 16/185 (8%)
Query: 140 GLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMA 199
G + VPVA+K + + R++L+E +G HPN+++L G +++ E+M
Sbjct: 74 GQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYME 133
Query: 200 RGSVENNLFSK----VLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT 255
GS++ L + ++ L +R G G+ +L ++ ++RD N+L+D+
Sbjct: 134 NGSLDTFLRTHDGQFTIMQLVGMLR-----GVGAGMRYL--SDLGYVHRDLAARNVLVDS 186
Query: 256 DYNAKLSDFGLAK---DGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
+ K+SDFGL++ D P D ++ +T + APE I + SDV+SFGVV+
Sbjct: 187 NLVCKVSDFGLSRVLEDDP--DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVM 244
Query: 313 LEILT 317
E+L
Sbjct: 245 WEVLA 249
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 129/304 (42%), Gaps = 41/304 (13%)
Query: 105 DELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWL 164
DE + R L VY+G +++ + + VA+K + S + E+L
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFL 61
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS--------KVLLPLP 216
E + + ++V+L+G + + ++I E M RG +++ L S VL P
Sbjct: 62 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 121
Query: 217 WSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKS 276
S +++A A G+A+L+ + ++RD N ++ D+ K+ DFG+ +D E D
Sbjct: 122 LSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 179
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-------GRKSLDKSRPAR 329
+ + + +PE + G T SDV+SFGVVL EI T G + R
Sbjct: 180 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 239
Query: 330 EQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIV 389
E L D N D LE L C +NPK RP +I+
Sbjct: 240 EGGLLD----------KPDNCPDMLLE-------------LMRMCWQYNPKMRPSFLEII 276
Query: 390 DSLE 393
S++
Sbjct: 277 SSIK 280
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 90/178 (50%), Gaps = 16/178 (8%)
Query: 158 QGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPW 217
+ R +L EV + L HPN++K IG +D+ I E++ G++ + + PW
Sbjct: 49 ETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLR-GIIKSMDSQYPW 107
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLA------KDGP 271
S R+ A A G+A+LH +I+RD + N L+ + N ++DFGLA K P
Sbjct: 108 SQRVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165
Query: 272 EGDKS------HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLD 323
EG +S ++G + APE I + DV+SFG+VL EI+ GR + D
Sbjct: 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 18/181 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VA+K G + + RE+L+E +G HPN+++L G +++ EFM G++++
Sbjct: 47 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 106
Query: 206 NL------FSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNA 259
L F+ + L + + G A G+ +L AE ++RD NIL++++
Sbjct: 107 FLRLNDGQFTVIQL-------VGMLRGIASGMRYL--AEMSYVHRDLAARNILVNSNLVC 157
Query: 260 KLSDFGLAKDGPEGDKSHVSTRIMGT---YGYAAPEYIMTGHLTPRSDVYSFGVVLLEIL 316
K+SDFGL++ E T +G + APE I T SD +S+G+V+ E++
Sbjct: 158 KVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 217
Query: 317 T 317
+
Sbjct: 218 S 218
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 127 CVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCC 186
CVY G + ++ +G + + AVK + ++L E I + SHPN++ L+G C
Sbjct: 45 CVYHGTLLDN--DG-KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL 101
Query: 187 EDEHR-VLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFG--AAKGLAFLHEAEKPVIY 243
E +++ +M G + N + ++ P +++ I FG AKG+ +L A K ++
Sbjct: 102 RSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL--ASKKFVH 156
Query: 244 RDFKTSNILLDTDYNAKLSDFGLAKD--GPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTP 301
RD N +LD + K++DFGLA+D E H T + A E + T T
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 216
Query: 302 RSDVYSFGVVLLEILT 317
+SDV+SFGV+L E++T
Sbjct: 217 KSDVWSFGVLLWELMT 232
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 127 CVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCC 186
CVY G + ++ +G + + AVK + ++L E I + SHPN++ L+G C
Sbjct: 64 CVYHGTLLDN--DG-KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL 120
Query: 187 EDEHR-VLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFG--AAKGLAFLHEAEKPVIY 243
E +++ +M G + N + ++ P +++ I FG AKG+ +L A K ++
Sbjct: 121 RSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL--ASKKFVH 175
Query: 244 RDFKTSNILLDTDYNAKLSDFGLAKD--GPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTP 301
RD N +LD + K++DFGLA+D E H T + A E + T T
Sbjct: 176 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 235
Query: 302 RSDVYSFGVVLLEILT 317
+SDV+SFGV+L E++T
Sbjct: 236 KSDVWSFGVLLWELMT 251
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 127 CVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCC 186
CVY G + ++ +G + + AVK + ++L E I + SHPN++ L+G C
Sbjct: 42 CVYHGTLLDN--DG-KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL 98
Query: 187 EDEHR-VLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFG--AAKGLAFLHEAEKPVIY 243
E +++ +M G + N + ++ P +++ I FG AKG+ +L A K ++
Sbjct: 99 RSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL--ASKKFVH 153
Query: 244 RDFKTSNILLDTDYNAKLSDFGLAKD--GPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTP 301
RD N +LD + K++DFGLA+D E H T + A E + T T
Sbjct: 154 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 213
Query: 302 RSDVYSFGVVLLEILT 317
+SDV+SFGV+L E++T
Sbjct: 214 KSDVWSFGVLLWELMT 229
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 127 CVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCC 186
CVY G + ++ +G + + AVK + ++L E I + SHPN++ L+G C
Sbjct: 37 CVYHGTLLDN--DG-KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL 93
Query: 187 EDEHR-VLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFG--AAKGLAFLHEAEKPVIY 243
E +++ +M G + N + ++ P +++ I FG AKG+ +L A K ++
Sbjct: 94 RSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL--ASKKFVH 148
Query: 244 RDFKTSNILLDTDYNAKLSDFGLAKD--GPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTP 301
RD N +LD + K++DFGLA+D E H T + A E + T T
Sbjct: 149 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 208
Query: 302 RSDVYSFGVVLLEILT 317
+SDV+SFGV+L E++T
Sbjct: 209 KSDVWSFGVLLWELMT 224
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 127 CVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCC 186
CVY G + ++ +G + + AVK + ++L E I + SHPN++ L+G C
Sbjct: 44 CVYHGTLLDN--DG-KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL 100
Query: 187 EDEHR-VLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFG--AAKGLAFLHEAEKPVIY 243
E +++ +M G + N + ++ P +++ I FG AKG+ +L A K ++
Sbjct: 101 RSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL--ASKKFVH 155
Query: 244 RDFKTSNILLDTDYNAKLSDFGLAKD--GPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTP 301
RD N +LD + K++DFGLA+D E H T + A E + T T
Sbjct: 156 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 215
Query: 302 RSDVYSFGVVLLEILT 317
+SDV+SFGV+L E++T
Sbjct: 216 KSDVWSFGVLLWELMT 231
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 127 CVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCC 186
CVY G + ++ +G + + AVK + ++L E I + SHPN++ L+G C
Sbjct: 45 CVYHGTLLDN--DG-KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL 101
Query: 187 EDEHR-VLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFG--AAKGLAFLHEAEKPVIY 243
E +++ +M G + N + ++ P +++ I FG AKG+ +L A K ++
Sbjct: 102 RSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL--ASKKFVH 156
Query: 244 RDFKTSNILLDTDYNAKLSDFGLAKD--GPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTP 301
RD N +LD + K++DFGLA+D E H T + A E + T T
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 216
Query: 302 RSDVYSFGVVLLEILT 317
+SDV+SFGV+L E++T
Sbjct: 217 KSDVWSFGVLLWELMT 232
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 127 CVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCC 186
CVY G + ++ +G + + AVK + ++L E I + SHPN++ L+G C
Sbjct: 63 CVYHGTLLDN--DG-KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL 119
Query: 187 EDEHR-VLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFG--AAKGLAFLHEAEKPVIY 243
E +++ +M G + N + ++ P +++ I FG AKG+ +L A K ++
Sbjct: 120 RSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL--ASKKFVH 174
Query: 244 RDFKTSNILLDTDYNAKLSDFGLAKD--GPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTP 301
RD N +LD + K++DFGLA+D E H T + A E + T T
Sbjct: 175 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 234
Query: 302 RSDVYSFGVVLLEILT 317
+SDV+SFGV+L E++T
Sbjct: 235 KSDVWSFGVLLWELMT 250
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 18/181 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VA+K G + + RE+L+E +G HPN+++L G +++ EFM G++++
Sbjct: 45 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 104
Query: 206 NL------FSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNA 259
L F+ + L + + G A G+ +L AE ++RD NIL++++
Sbjct: 105 FLRLNDGQFTVIQL-------VGMLRGIASGMRYL--AEMSYVHRDLAARNILVNSNLVC 155
Query: 260 KLSDFGLAKDGPEGDKSHVSTRIMGT---YGYAAPEYIMTGHLTPRSDVYSFGVVLLEIL 316
K+SDFGL++ E T +G + APE I T SD +S+G+V+ E++
Sbjct: 156 KVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 215
Query: 317 T 317
+
Sbjct: 216 S 216
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 127 CVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCC 186
CVY G + ++ +G + + AVK + ++L E I + SHPN++ L+G C
Sbjct: 40 CVYHGTLLDN--DG-KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL 96
Query: 187 EDEHR-VLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFG--AAKGLAFLHEAEKPVIY 243
E +++ +M G + N + ++ P +++ I FG AKG+ +L A K ++
Sbjct: 97 RSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL--ASKKFVH 151
Query: 244 RDFKTSNILLDTDYNAKLSDFGLAKD--GPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTP 301
RD N +LD + K++DFGLA+D E H T + A E + T T
Sbjct: 152 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 211
Query: 302 RSDVYSFGVVLLEILT 317
+SDV+SFGV+L E++T
Sbjct: 212 KSDVWSFGVLLWELMT 227
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 127/297 (42%), Gaps = 27/297 (9%)
Query: 105 DELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWL 164
DE + R L VY+G +++ + + VA+K + S + E+L
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFL 70
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS--------KVLLPLP 216
E + + ++V+L+G + + ++I E M RG +++ L S VL P
Sbjct: 71 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 130
Query: 217 WSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKS 276
S +++A A G+A+L+ ++RD N ++ D+ K+ DFG+ +D E D
Sbjct: 131 LSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 188
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADW 336
+ + + +PE + G T SDV+SFGVVL EI T LA+
Sbjct: 189 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQ 233
Query: 337 AXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVDSLE 393
+++ L D P L C +NPK RP +I+ S++
Sbjct: 234 PYQGLSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 127 CVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCC 186
CVY G + ++ +G + + AVK + ++L E I + SHPN++ L+G C
Sbjct: 43 CVYHGTLLDN--DG-KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL 99
Query: 187 EDEHR-VLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFG--AAKGLAFLHEAEKPVIY 243
E +++ +M G + N + ++ P +++ I FG AKG+ +L A K ++
Sbjct: 100 RSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL--ASKKFVH 154
Query: 244 RDFKTSNILLDTDYNAKLSDFGLAKD--GPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTP 301
RD N +LD + K++DFGLA+D E H T + A E + T T
Sbjct: 155 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 214
Query: 302 RSDVYSFGVVLLEILT 317
+SDV+SFGV+L E++T
Sbjct: 215 KSDVWSFGVLLWELMT 230
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 132/304 (43%), Gaps = 33/304 (10%)
Query: 101 AFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGH 160
F DE + R L VY+G +++ + + VA+K + S +
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 63
Query: 161 REWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS--------KVL 212
E+L E + + ++V+L+G + + ++I E M RG +++ L S VL
Sbjct: 64 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 123
Query: 213 LPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPE 272
P S +++A A G+A+L+ ++RD N ++ D+ K+ DFG+ +D E
Sbjct: 124 APPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 181
Query: 273 GDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQN 332
D + + + +PE + G T SDV+SFGVVL EI T +P Q
Sbjct: 182 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----LAEQPY--QG 234
Query: 333 LADWAXXXXXXXXXXXNIIDPRLEG---DYPVKGVHKAAMLAYHCLNHNPKARPLMRDIV 389
L++ ++ +EG D P L C +NPK RP +I+
Sbjct: 235 LSN------------EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 282
Query: 390 DSLE 393
S++
Sbjct: 283 SSIK 286
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 31/306 (10%)
Query: 98 PLIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSY 157
P F DE + R L VY+G + D+ +G VAVK + S
Sbjct: 3 PSSVFVPDEWEVSREKITLLRELGQGSFGMVYEGN-ARDIIKGEAETRVAVKTVNESASL 61
Query: 158 QGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPL-- 215
+ E+L E + + ++V+L+G + + +++ E MA G +++ L S L P
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS--LRPEAE 119
Query: 216 ------PWSIRMKIAFGA--AKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLA 267
P +++ I A A G+A+L+ K ++RD N ++ D+ K+ DFG+
Sbjct: 120 NNPGRPPPTLQEMIQMAAEIADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Query: 268 KDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRP 327
+D E D + + + APE + G T SD++SFGVVL EI +
Sbjct: 178 RDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------- 227
Query: 328 AREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRD 387
LA+ ++D D P + L C NPK RP +
Sbjct: 228 -----LAEQPYQGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPKMRPTFLE 281
Query: 388 IVDSLE 393
IV+ L+
Sbjct: 282 IVNLLK 287
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 133/300 (44%), Gaps = 33/300 (11%)
Query: 105 DELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWL 164
DE + R L VY+G +++ + + VA+K + S + E+L
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFL 76
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS--------KVLLPLP 216
E + + ++V+L+G + + ++I E M RG +++ L S VL P
Sbjct: 77 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 136
Query: 217 WSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKS 276
S +++A A G+A+L+ + ++RD N ++ D+ K+ DFG+ +D E D
Sbjct: 137 LSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 194
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADW 336
+ + + +PE + G T SDV+SFGVVL EI T + +P Q L++
Sbjct: 195 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE-----QPY--QGLSN- 246
Query: 337 AXXXXXXXXXXXNIIDPRLEG---DYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVDSLE 393
++ +EG D P L C +NPK RP +I+ S++
Sbjct: 247 -----------EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 128/297 (43%), Gaps = 27/297 (9%)
Query: 105 DELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWL 164
DE + R L VY+G +++ + + VA+K + S + E+L
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFL 76
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS--------KVLLPLP 216
E + + ++V+L+G + + ++I E M RG +++ L S VL P
Sbjct: 77 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 136
Query: 217 WSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKS 276
S +++A A G+A+L+ + ++RD N ++ D+ K+ DFG+ +D E D
Sbjct: 137 LSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 194
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADW 336
+ + + +PE + G T SDV+SFGVVL EI T LA+
Sbjct: 195 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQ 239
Query: 337 AXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVDSLE 393
+++ L D P L C +NPK RP +I+ S++
Sbjct: 240 PYQGLSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 128/297 (43%), Gaps = 27/297 (9%)
Query: 105 DELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWL 164
DE + R L VY+G +++ + + VA+K + S + E+L
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFL 63
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS--------KVLLPLP 216
E + + ++V+L+G + + ++I E M RG +++ L S VL P
Sbjct: 64 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 217 WSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKS 276
S +++A A G+A+L+ + ++RD N ++ D+ K+ DFG+ +D E D
Sbjct: 124 LSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADW 336
+ + + +PE + G T SDV+SFGVVL EI T LA+
Sbjct: 182 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQ 226
Query: 337 AXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVDSLE 393
+++ L D P L C +NPK RP +I+ S++
Sbjct: 227 PYQGLSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 121/235 (51%), Gaps = 25/235 (10%)
Query: 106 ELRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREG-LQPVPVAVKVHDGDNSYQGHREW 163
+LRI+ ++ +VL VYKG + EG +PVA+K+ + + + E+
Sbjct: 31 QLRILKETELKRVKVLGSGAFGTVYKGIW---VPEGETVKIPVAIKILNETTGPKANVEF 87
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLP 216
+ E + + + HP+LV+L+G C + L+ + M G + ++N+ S++L L
Sbjct: 88 MDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLL--LN 144
Query: 217 WSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKS 276
W +++ AKG+ +L E+ +++RD N+L+ + + K++DFGLA+ +K
Sbjct: 145 WCVQI------AKGMMYLE--ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE 196
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + + A E I T +SDV+S+GV + E++T G K D P RE
Sbjct: 197 YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD-GIPTRE 250
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 121/235 (51%), Gaps = 25/235 (10%)
Query: 106 ELRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREG-LQPVPVAVKVHDGDNSYQGHREW 163
+LRI+ ++ +VL VYKG + EG +PVA+K+ + + + E+
Sbjct: 8 QLRILKETELKRVKVLGSGAFGTVYKGIW---VPEGETVKIPVAIKILNETTGPKANVEF 64
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLP 216
+ E + + + HP+LV+L+G C + L+ + M G + ++N+ S++L L
Sbjct: 65 MDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLL--LN 121
Query: 217 WSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKS 276
W +++ AKG+ +L E+ +++RD N+L+ + + K++DFGLA+ +K
Sbjct: 122 WCVQI------AKGMMYLE--ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE 173
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + + A E I T +SDV+S+GV + E++T G K D P RE
Sbjct: 174 YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD-GIPTRE 227
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 127/297 (42%), Gaps = 27/297 (9%)
Query: 105 DELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWL 164
DE + R L VY+G +++ + + VA+K + S + E+L
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFL 69
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS--------KVLLPLP 216
E + + ++V+L+G + + ++I E M RG +++ L S VL P
Sbjct: 70 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 129
Query: 217 WSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKS 276
S +++A A G+A+L+ ++RD N ++ D+ K+ DFG+ +D E D
Sbjct: 130 LSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 187
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADW 336
+ + + +PE + G T SDV+SFGVVL EI T LA+
Sbjct: 188 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQ 232
Query: 337 AXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVDSLE 393
+++ L D P L C +NPK RP +I+ S++
Sbjct: 233 PYQGLSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 127/297 (42%), Gaps = 27/297 (9%)
Query: 105 DELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWL 164
DE + R L VY+G +++ + + VA+K + S + E+L
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFL 70
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS--------KVLLPLP 216
E + + ++V+L+G + + ++I E M RG +++ L S VL P
Sbjct: 71 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 130
Query: 217 WSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKS 276
S +++A A G+A+L+ ++RD N ++ D+ K+ DFG+ +D E D
Sbjct: 131 LSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 188
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADW 336
+ + + +PE + G T SDV+SFGVVL EI T LA+
Sbjct: 189 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQ 233
Query: 337 AXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVDSLE 393
+++ L D P L C +NPK RP +I+ S++
Sbjct: 234 PYQGLSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 131/300 (43%), Gaps = 33/300 (11%)
Query: 105 DELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWL 164
DE + R L VY+G +++ + + VA+K + S + E+L
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFL 66
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS--------KVLLPLP 216
E + + ++V+L+G + + ++I E M RG +++ L S VL P
Sbjct: 67 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 126
Query: 217 WSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKS 276
S +++A A G+A+L+ ++RD N ++ D+ K+ DFG+ +D E D
Sbjct: 127 LSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 184
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADW 336
+ + + +PE + G T SDV+SFGVVL EI T +P Q L++
Sbjct: 185 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----LAEQPY--QGLSN- 236
Query: 337 AXXXXXXXXXXXNIIDPRLEG---DYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVDSLE 393
++ +EG D P L C +NPK RP +I+ S++
Sbjct: 237 -----------EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 285
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 131/300 (43%), Gaps = 33/300 (11%)
Query: 105 DELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWL 164
DE + R L VY+G +++ + + VA+K + S + E+L
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFL 69
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS--------KVLLPLP 216
E + + ++V+L+G + + ++I E M RG +++ L S VL P
Sbjct: 70 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 129
Query: 217 WSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKS 276
S +++A A G+A+L+ ++RD N ++ D+ K+ DFG+ +D E D
Sbjct: 130 LSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 187
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADW 336
+ + + +PE + G T SDV+SFGVVL EI T +P Q L++
Sbjct: 188 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----LAEQPY--QGLSN- 239
Query: 337 AXXXXXXXXXXXNIIDPRLEG---DYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVDSLE 393
++ +EG D P L C +NPK RP +I+ S++
Sbjct: 240 -----------EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 128/304 (42%), Gaps = 41/304 (13%)
Query: 105 DELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWL 164
DE + R L VY+G +++ + + VA+K + S + E+L
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFL 63
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS--------KVLLPLP 216
E + + ++V+L+G + + ++I E M RG +++ L S VL P
Sbjct: 64 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 217 WSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKS 276
S +++A A G+A+L+ + ++RD N + D+ K+ DFG+ +D E D
Sbjct: 124 LSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-------GRKSLDKSRPAR 329
+ + + +PE + G T SDV+SFGVVL EI T G + R
Sbjct: 182 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 241
Query: 330 EQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIV 389
E L D N D LE L C +NPK RP +I+
Sbjct: 242 EGGLLD----------KPDNCPDMLLE-------------LMRMCWQYNPKMRPSFLEII 278
Query: 390 DSLE 393
S++
Sbjct: 279 SSIK 282
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 128/303 (42%), Gaps = 31/303 (10%)
Query: 101 AFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGH 160
F DE + R L VY+G + D+ +G VAVK + S +
Sbjct: 3 VFVPDEWEVSREKITLLRELGQGSFGMVYEGN-ARDIIKGEAETRVAVKTVNESASLRER 61
Query: 161 REWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPL----- 215
E+L E + + ++V+L+G + + +++ E MA G +++ L S L P
Sbjct: 62 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS--LRPEAENNP 119
Query: 216 ---PWSIRMKIAFGA--AKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDG 270
P +++ I A A G+A+L+ K ++RD N ++ D+ K+ DFG+ +D
Sbjct: 120 GRPPPTLQEMIQMAAEIADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 177
Query: 271 PEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPARE 330
E D + + + APE + G T SD++SFGVVL EI +
Sbjct: 178 XETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS------------- 224
Query: 331 QNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
LA+ ++D D P + L C NPK RP +IV+
Sbjct: 225 --LAEQPYQGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVN 281
Query: 391 SLE 393
L+
Sbjct: 282 LLK 284
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 127/297 (42%), Gaps = 27/297 (9%)
Query: 105 DELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWL 164
DE + R L VY+G +++ + + VA+K + S + E+L
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFL 98
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS--------KVLLPLP 216
E + + ++V+L+G + + ++I E M RG +++ L S VL P
Sbjct: 99 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 158
Query: 217 WSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKS 276
S +++A A G+A+L+ ++RD N ++ D+ K+ DFG+ +D E D
Sbjct: 159 LSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 216
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADW 336
+ + + +PE + G T SDV+SFGVVL EI T LA+
Sbjct: 217 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQ 261
Query: 337 AXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVDSLE 393
+++ L D P L C +NPK RP +I+ S++
Sbjct: 262 PYQGLSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 317
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 20/185 (10%)
Query: 142 QPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARG 201
+ + VA+K + + R++L E +G HPN+++L G + + +++ E+M G
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 202 SVENNL------FSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT 255
S+++ L F+ + L + + G A G+ +L ++ ++RD NIL+++
Sbjct: 132 SLDSFLRKHDAQFTVIQL-------VGMLRGIASGMKYL--SDMGYVHRDLAARNILINS 182
Query: 256 DYNAKLSDFGLAK---DGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
+ K+SDFGLA+ D PE + +I + +PE I T SDV+S+G+VL
Sbjct: 183 NLVCKVSDFGLARVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 313 LEILT 317
E+++
Sbjct: 241 WEVMS 245
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 140 GLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMA 199
G + V VA+K + + R++L E +G HPN+V L G + +++ EFM
Sbjct: 68 GKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFME 127
Query: 200 RGSVENNLFSK----VLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT 255
G+++ L ++ L +R G A G+ +L A+ ++RD NIL+++
Sbjct: 128 NGALDAFLRKHDGQFTVIQLVGMLR-----GIAAGMRYL--ADMGYVHRDLAARNILVNS 180
Query: 256 DYNAKLSDFGLAK---DGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
+ K+SDFGL++ D PE + +I + APE I T SDV+S+G+V+
Sbjct: 181 NLVCKVSDFGLSRVIEDDPEAVYTTTGGKI--PVRWTAPEAIQYRKFTSASDVWSYGIVM 238
Query: 313 LEILT 317
E+++
Sbjct: 239 WEVMS 243
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 97/187 (51%), Gaps = 20/187 (10%)
Query: 140 GLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMA 199
G + +PVA+K + + R++L E +G HPN++ L G + + +++ E+M
Sbjct: 47 GKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYME 106
Query: 200 RGSVENNL------FSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILL 253
GS++ L F+ + L + + G + G+ +L ++ ++RD NIL+
Sbjct: 107 NGSLDTFLKKNDGQFTVIQL-------VGMLRGISAGMKYL--SDMGYVHRDLAARNILI 157
Query: 254 DTDYNAKLSDFGLAK---DGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGV 310
+++ K+SDFGL++ D PE + +I + APE I T SDV+S+G+
Sbjct: 158 NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTAPEAIAFRKFTSASDVWSYGI 215
Query: 311 VLLEILT 317
V+ E+++
Sbjct: 216 VMWEVVS 222
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 14/185 (7%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV 203
+ VAVK D S +++ E L +L H ++VK G C E + ++++E+M G +
Sbjct: 44 ILVAVKTLK-DASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDL 102
Query: 204 ENNLFSK----VLLP-------LPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNIL 252
L + VL+ L S + IA A G+ +L A + ++RD T N L
Sbjct: 103 NKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL--ASQHFVHRDLATRNCL 160
Query: 253 LDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
+ + K+ DFG+++D D V M + PE IM T SDV+S GVVL
Sbjct: 161 VGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVL 220
Query: 313 LEILT 317
EI T
Sbjct: 221 WEIFT 225
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 14/185 (7%)
Query: 140 GLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMA 199
G + + VA+K + + R++L+E +G HPN++ L G + ++I EFM
Sbjct: 58 GKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFME 117
Query: 200 RGSVENNLFSK----VLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT 255
GS+++ L ++ L +R G A G+ +L A+ ++RD NIL+++
Sbjct: 118 NGSLDSFLRQNDGQFTVIQLVGMLR-----GIAAGMKYL--ADMNYVHRDLAARNILVNS 170
Query: 256 DYNAKLSDFGLAKDGPEGDKSHVSTRIMGT---YGYAAPEYIMTGHLTPRSDVYSFGVVL 312
+ K+SDFGL++ + T +G + APE I T SDV+S+G+V+
Sbjct: 171 NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVM 230
Query: 313 LEILT 317
E+++
Sbjct: 231 WEVMS 235
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 31/306 (10%)
Query: 98 PLIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSY 157
P F DE + R L VY+G + D+ +G VAVK + S
Sbjct: 3 PSSVFVPDEWEVSREKITLLRELGQGSFGMVYEGN-ARDIIKGEAETRVAVKTVNESASL 61
Query: 158 QGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPL-- 215
+ E+L E + + ++V+L+G + + +++ E MA G +++ L S L P
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS--LRPEAE 119
Query: 216 ------PWSIRMKIAFGA--AKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLA 267
P +++ I A A G+A+L+ K ++RD N ++ D+ K+ DFG+
Sbjct: 120 NNPGRPPPTLQEMIQMAAEIADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Query: 268 KDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRP 327
+D E D + + + APE + G T SD++SFGVVL EI +
Sbjct: 178 RDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------- 227
Query: 328 AREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRD 387
LA+ ++D D P + L C NPK RP +
Sbjct: 228 -----LAEQPYQGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPKMRPTFLE 281
Query: 388 IVDSLE 393
IV+ L+
Sbjct: 282 IVNLLK 287
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 117/268 (43%), Gaps = 33/268 (12%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMARGSVE 204
VAVK+ D + + + ++E+ + + H N++ L+G C +D +I E+ ++G++
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 205 NNLFSKVLLPLPWSIR--------------MKIAFGAAKGLAFLHEAEKPVIYRDFKTSN 250
L ++ L +S + A+ A+G+ +L A K I+RD N
Sbjct: 123 EYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARN 180
Query: 251 ILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGV 310
+L+ D K++DFGLA+D D +T + APE + T +SDV+SFGV
Sbjct: 181 VLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV 240
Query: 311 VLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAML 370
+L EI T S P E ++ D P ++ M+
Sbjct: 241 LLWEIFTLGGSPYPGVPVEE----------------LFKLLKEGHRMDKPSNCTNELYMM 284
Query: 371 AYHCLNHNPKARPLMRDIVDSLEPLQVL 398
C + P RP + +V+ L+ + L
Sbjct: 285 MRDCWHAVPSQRPTFKQLVEDLDRIVAL 312
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 97/185 (52%), Gaps = 20/185 (10%)
Query: 142 QPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARG 201
+ + VA+K + + R++L E +G HPN+++L G + + +++ E+M G
Sbjct: 43 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 102
Query: 202 SVENNL------FSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT 255
S+++ L F+ + L + + G A G+ +L ++ ++RD NIL+++
Sbjct: 103 SLDSFLRKHDAQFTVIQL-------VGMLRGIASGMKYL--SDMGYVHRDLAARNILINS 153
Query: 256 DYNAKLSDFGLAK---DGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
+ K+SDFGL++ D PE + +I + +PE I T SDV+S+G+VL
Sbjct: 154 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVL 211
Query: 313 LEILT 317
E+++
Sbjct: 212 WEVMS 216
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 97/185 (52%), Gaps = 20/185 (10%)
Query: 142 QPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARG 201
+ + VA+K + + R++L E +G HPN+++L G + + +++ E+M G
Sbjct: 60 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 119
Query: 202 SVENNL------FSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT 255
S+++ L F+ + L + + G A G+ +L ++ ++RD NIL+++
Sbjct: 120 SLDSFLRKHDAQFTVIQL-------VGMLRGIASGMKYL--SDMGYVHRDLAARNILINS 170
Query: 256 DYNAKLSDFGLAK---DGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
+ K+SDFGL++ D PE + +I + +PE I T SDV+S+G+VL
Sbjct: 171 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVL 228
Query: 313 LEILT 317
E+++
Sbjct: 229 WEVMS 233
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 97/185 (52%), Gaps = 20/185 (10%)
Query: 142 QPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARG 201
+ + VA+K + + R++L E +G HPN+++L G + + +++ E+M G
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 202 SVENNL------FSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT 255
S+++ L F+ + L + + G A G+ +L ++ ++RD NIL+++
Sbjct: 132 SLDSFLRKHDAQFTVIQL-------VGMLRGIASGMKYL--SDMGFVHRDLAARNILINS 182
Query: 256 DYNAKLSDFGLAK---DGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
+ K+SDFGL++ D PE + +I + +PE I T SDV+S+G+VL
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 313 LEILT 317
E+++
Sbjct: 241 WEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 97/185 (52%), Gaps = 20/185 (10%)
Query: 142 QPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARG 201
+ + VA+K + + R++L E +G HPN+++L G + + +++ E+M G
Sbjct: 70 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 129
Query: 202 SVENNL------FSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT 255
S+++ L F+ + L + + G A G+ +L ++ ++RD NIL+++
Sbjct: 130 SLDSFLRKHDAQFTVIQL-------VGMLRGIASGMKYL--SDMGYVHRDLAARNILINS 180
Query: 256 DYNAKLSDFGLAK---DGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
+ K+SDFGL++ D PE + +I + +PE I T SDV+S+G+VL
Sbjct: 181 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVL 238
Query: 313 LEILT 317
E+++
Sbjct: 239 WEVMS 243
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 110/241 (45%), Gaps = 31/241 (12%)
Query: 161 REWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPW--- 217
+ ++ E+ L ++HPN+VKL G C L+ E+ GS+ N L PLP+
Sbjct: 47 KAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAE--PLPYYTA 102
Query: 218 SIRMKIAFGAAKGLAFLHEAE-KPVIYRDFKTSNILLDTDYNA-KLSDFGLAKDGPEGDK 275
+ M ++G+A+LH + K +I+RD K N+LL K+ DFG A D +
Sbjct: 103 AHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD----IQ 158
Query: 276 SHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDK-SRPAREQNLA 334
+H++ G+ + APE + + + DV+S+G++L E++T RK D+ PA
Sbjct: 159 THMTNN-KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR---I 214
Query: 335 DWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVDSLEP 394
WA N+ P L C + +P RP M +IV +
Sbjct: 215 MWAVHNGTRPPLIKNLPKP-------------IESLMTRCWSKDPSQRPSMEEIVKIMTH 261
Query: 395 L 395
L
Sbjct: 262 L 262
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 31/241 (12%)
Query: 161 REWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPW--- 217
+ ++ E+ L ++HPN+VKL G C L+ E+ GS+ N L PLP+
Sbjct: 46 KAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAE--PLPYYTA 101
Query: 218 SIRMKIAFGAAKGLAFLHEAE-KPVIYRDFKTSNILLDTDYNA-KLSDFGLAKDGPEGDK 275
+ M ++G+A+LH + K +I+RD K N+LL K+ DFG A D +
Sbjct: 102 AHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD----IQ 157
Query: 276 SHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDK-SRPAREQNLA 334
+H+ T G+ + APE + + + DV+S+G++L E++T RK D+ PA
Sbjct: 158 THM-TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR---I 213
Query: 335 DWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVDSLEP 394
WA N+ P L C + +P RP M +IV +
Sbjct: 214 MWAVHNGTRPPLIKNLPKP-------------IESLMTRCWSKDPSQRPSMEEIVKIMTH 260
Query: 395 L 395
L
Sbjct: 261 L 261
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 97/185 (52%), Gaps = 20/185 (10%)
Query: 142 QPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARG 201
+ + VA+K + + R++L E +G HPN+++L G + + +++ E+M G
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 202 SVENNL------FSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT 255
S+++ L F+ + L + + G A G+ +L ++ ++RD NIL+++
Sbjct: 132 SLDSFLRKHDAQFTVIQL-------VGMLRGIASGMKYL--SDMGYVHRDLAARNILINS 182
Query: 256 DYNAKLSDFGLAK---DGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
+ K+SDFGL++ D PE + +I + +PE I T SDV+S+G+VL
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 313 LEILT 317
E+++
Sbjct: 241 WEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 97/185 (52%), Gaps = 20/185 (10%)
Query: 142 QPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARG 201
+ + VA+K + + R++L E +G HPN+++L G + + +++ E+M G
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 202 SVENNL------FSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT 255
S+++ L F+ + L + + G A G+ +L ++ ++RD NIL+++
Sbjct: 132 SLDSFLRKHDAQFTVIQL-------VGMLRGIASGMKYL--SDMGYVHRDLAARNILINS 182
Query: 256 DYNAKLSDFGLAK---DGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
+ K+SDFGL++ D PE + +I + +PE I T SDV+S+G+VL
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 313 LEILT 317
E+++
Sbjct: 241 WEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 97/185 (52%), Gaps = 20/185 (10%)
Query: 142 QPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARG 201
+ + VA+K + + R++L E +G HPN+++L G + + +++ E+M G
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 202 SVENNL------FSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT 255
S+++ L F+ + L + + G A G+ +L ++ ++RD NIL+++
Sbjct: 132 SLDSFLRKHDAQFTVIQL-------VGMLRGIASGMKYL--SDMGYVHRDLAARNILINS 182
Query: 256 DYNAKLSDFGLAK---DGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
+ K+SDFGL++ D PE + +I + +PE I T SDV+S+G+VL
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 313 LEILT 317
E+++
Sbjct: 241 WEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 97/185 (52%), Gaps = 20/185 (10%)
Query: 142 QPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARG 201
+ + VA+K + + R++L E +G HPN+++L G + + +++ E+M G
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 202 SVENNL------FSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT 255
S+++ L F+ + L + + G A G+ +L ++ ++RD NIL+++
Sbjct: 132 SLDSFLRKHDAQFTVIQL-------VGMLRGIASGMKYL--SDMGYVHRDLAARNILINS 182
Query: 256 DYNAKLSDFGLAK---DGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
+ K+SDFGL++ D PE + +I + +PE I T SDV+S+G+VL
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 313 LEILT 317
E+++
Sbjct: 241 WEVMS 245
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 117/268 (43%), Gaps = 33/268 (12%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMARGSVE 204
VAVK+ D + + + ++E+ + + H N++ L+G C +D +I E+ ++G++
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 111
Query: 205 NNLFSKVLLPLPWSIR--------------MKIAFGAAKGLAFLHEAEKPVIYRDFKTSN 250
L ++ L +S + A+ A+G+ +L A K I+RD N
Sbjct: 112 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARN 169
Query: 251 ILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGV 310
+L+ D K++DFGLA+D D +T + APE + T +SDV+SFGV
Sbjct: 170 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV 229
Query: 311 VLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAML 370
+L EI T S P E ++ D P ++ M+
Sbjct: 230 LLWEIFTLGGSPYPGVPVEE----------------LFKLLKEGHRMDKPSNCTNELYMM 273
Query: 371 AYHCLNHNPKARPLMRDIVDSLEPLQVL 398
C + P RP + +V+ L+ + L
Sbjct: 274 MRDCWHAVPSQRPTFKQLVEDLDRIVAL 301
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 20/185 (10%)
Query: 142 QPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARG 201
+ + VA+K + + R++L E +G HPN+++L G + + +++ E+M G
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 202 SVENNL------FSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT 255
S+++ L F+ + L + + G A G+ +L ++ ++RD NIL+++
Sbjct: 132 SLDSFLRKHDAQFTVIQL-------VGMLRGIASGMKYL--SDMGYVHRDLAARNILINS 182
Query: 256 DYNAKLSDFGLAK---DGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
+ K+SDFGL + D PE + +I + +PE I T SDV+S+G+VL
Sbjct: 183 NLVCKVSDFGLGRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 313 LEILT 317
E+++
Sbjct: 241 WEVMS 245
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 117/268 (43%), Gaps = 33/268 (12%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMARGSVE 204
VAVK+ D + + + ++E+ + + H N++ L+G C +D +I E+ ++G++
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 115
Query: 205 NNLFSKVLLPLPWSIR--------------MKIAFGAAKGLAFLHEAEKPVIYRDFKTSN 250
L ++ L +S + A+ A+G+ +L A K I+RD N
Sbjct: 116 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARN 173
Query: 251 ILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGV 310
+L+ D K++DFGLA+D D +T + APE + T +SDV+SFGV
Sbjct: 174 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV 233
Query: 311 VLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAML 370
+L EI T S P E ++ D P ++ M+
Sbjct: 234 LLWEIFTLGGSPYPGVPVEE----------------LFKLLKEGHRMDKPSNCTNELYMM 277
Query: 371 AYHCLNHNPKARPLMRDIVDSLEPLQVL 398
C + P RP + +V+ L+ + L
Sbjct: 278 MRDCWHAVPSQRPTFKQLVEDLDRIVAL 305
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 117/268 (43%), Gaps = 33/268 (12%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMARGSVE 204
VAVK+ D + + + ++E+ + + H N++ L+G C +D +I E+ ++G++
Sbjct: 55 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 114
Query: 205 NNLFSKVLLPLPWSIR--------------MKIAFGAAKGLAFLHEAEKPVIYRDFKTSN 250
L ++ L +S + A+ A+G+ +L A K I+RD N
Sbjct: 115 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARN 172
Query: 251 ILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGV 310
+L+ D K++DFGLA+D D +T + APE + T +SDV+SFGV
Sbjct: 173 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV 232
Query: 311 VLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAML 370
+L EI T S P E ++ D P ++ M+
Sbjct: 233 LLWEIFTLGGSPYPGVPVEE----------------LFKLLKEGHRMDKPSNCTNELYMM 276
Query: 371 AYHCLNHNPKARPLMRDIVDSLEPLQVL 398
C + P RP + +V+ L+ + L
Sbjct: 277 MRDCWHAVPSQRPTFKQLVEDLDRIVAL 304
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 117/268 (43%), Gaps = 33/268 (12%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMARGSVE 204
VAVK+ D + + + ++E+ + + H N++ L+G C +D +I E+ ++G++
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 205 NNLFSKVLLPLPWSIR--------------MKIAFGAAKGLAFLHEAEKPVIYRDFKTSN 250
L ++ L +S + A+ A+G+ +L A K I+RD N
Sbjct: 123 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARN 180
Query: 251 ILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGV 310
+L+ D K++DFGLA+D D +T + APE + T +SDV+SFGV
Sbjct: 181 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV 240
Query: 311 VLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAML 370
+L EI T S P E ++ D P ++ M+
Sbjct: 241 LLWEIFTLGGSPYPGVPVEE----------------LFKLLKEGHRMDKPSNCTNELYMM 284
Query: 371 AYHCLNHNPKARPLMRDIVDSLEPLQVL 398
C + P RP + +V+ L+ + L
Sbjct: 285 MRDCWHAVPSQRPTFKQLVEDLDRIVAL 312
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 117/268 (43%), Gaps = 33/268 (12%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMARGSVE 204
VAVK+ D + + + ++E+ + + H N++ L+G C +D +I E+ ++G++
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 205 NNLFSKVLLPLPWSIR--------------MKIAFGAAKGLAFLHEAEKPVIYRDFKTSN 250
L ++ L +S + A+ A+G+ +L A K I+RD N
Sbjct: 123 EYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARN 180
Query: 251 ILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGV 310
+L+ D K++DFGLA+D D +T + APE + T +SDV+SFGV
Sbjct: 181 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV 240
Query: 311 VLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAML 370
+L EI T S P E ++ D P ++ M+
Sbjct: 241 LLWEIFTLGGSPYPGVPVEE----------------LFKLLKEGHRMDKPSNCTNELYMM 284
Query: 371 AYHCLNHNPKARPLMRDIVDSLEPLQVL 398
C + P RP + +V+ L+ + L
Sbjct: 285 MRDCWHAVPSQRPTFKQLVEDLDRIVAL 312
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 128/306 (41%), Gaps = 31/306 (10%)
Query: 98 PLIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSY 157
P + DE + R L VY+G + D+ +G VAVK + S
Sbjct: 3 PSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGN-ARDIIKGEAETRVAVKTVNESASL 61
Query: 158 QGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPL-- 215
+ E+L E + + ++V+L+G + + +++ E MA G +++ L S L P
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS--LRPEAE 119
Query: 216 ------PWSIRMKIAFGA--AKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLA 267
P +++ I A A G+A+L+ K ++RD N ++ D+ K+ DFG+
Sbjct: 120 NNPGRPPPTLQEMIQMAAEIADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Query: 268 KDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRP 327
+D E D + + + APE + G T SD++SFGVVL EI +
Sbjct: 178 RDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------- 227
Query: 328 AREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRD 387
LA+ ++D D P + L C NP RP +
Sbjct: 228 -----LAEQPYQGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPNMRPTFLE 281
Query: 388 IVDSLE 393
IV+ L+
Sbjct: 282 IVNLLK 287
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 20/185 (10%)
Query: 142 QPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARG 201
+ + VA+K + + R++L E +G HPN+++L G + + +++ E M G
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENG 131
Query: 202 SVENNL------FSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT 255
S+++ L F+ + L + + G A G+ +L ++ ++RD NIL+++
Sbjct: 132 SLDSFLRKHDAQFTVIQL-------VGMLRGIASGMKYL--SDMGAVHRDLAARNILINS 182
Query: 256 DYNAKLSDFGLAK---DGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
+ K+SDFGL++ D PE + +I + +PE I T SDV+S+G+VL
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 313 LEILT 317
E+++
Sbjct: 241 WEVMS 245
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 117/268 (43%), Gaps = 33/268 (12%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMARGSVE 204
VAVK+ D + + + ++E+ + + H N++ L+G C +D +I E+ ++G++
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 163
Query: 205 NNLFSKVLLPLPWSIR--------------MKIAFGAAKGLAFLHEAEKPVIYRDFKTSN 250
L ++ L +S + A+ A+G+ +L A K I+RD N
Sbjct: 164 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARN 221
Query: 251 ILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGV 310
+L+ D K++DFGLA+D D +T + APE + T +SDV+SFGV
Sbjct: 222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV 281
Query: 311 VLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAML 370
+L EI T S P E ++ D P ++ M+
Sbjct: 282 LLWEIFTLGGSPYPGVPVEE----------------LFKLLKEGHRMDKPSNCTNELYMM 325
Query: 371 AYHCLNHNPKARPLMRDIVDSLEPLQVL 398
C + P RP + +V+ L+ + L
Sbjct: 326 MRDCWHAVPSQRPTFKQLVEDLDRIVAL 353
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 16/185 (8%)
Query: 140 GLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMA 199
G + + VA+K + + R++L+E +G HPN++ L G + + ++I E+M
Sbjct: 54 GKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYME 113
Query: 200 RGSVENNLFSK----VLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT 255
GS++ L ++ L +R G G+ +L ++ ++RD NIL+++
Sbjct: 114 NGSLDAFLRKNDGRFTVIQLVGMLR-----GIGSGMKYL--SDMSAVHRDLAARNILVNS 166
Query: 256 DYNAKLSDFGLAK---DGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
+ K+SDFG+++ D PE + +I + APE I T SDV+S+G+V+
Sbjct: 167 NLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTAPEAIAYRKFTSASDVWSYGIVM 224
Query: 313 LEILT 317
E+++
Sbjct: 225 WEVMS 229
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 20/185 (10%)
Query: 142 QPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARG 201
+ + VA+K + + R++L E +G HPN+++L G + + +++ E M G
Sbjct: 43 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENG 102
Query: 202 SVENNL------FSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT 255
S+++ L F+ + L + + G A G+ +L ++ ++RD NIL+++
Sbjct: 103 SLDSFLRKHDAQFTVIQL-------VGMLRGIASGMKYL--SDMGYVHRDLAARNILINS 153
Query: 256 DYNAKLSDFGLAK---DGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
+ K+SDFGL++ D PE + +I + +PE I T SDV+S+G+VL
Sbjct: 154 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVL 211
Query: 313 LEILT 317
E+++
Sbjct: 212 WEVMS 216
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 16/178 (8%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRV-LIYEFMARGSVE 204
VAVK D + Q +LAE + L H NLV+L+G E++ + ++ E+MA+GS+
Sbjct: 219 VAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 275
Query: 205 NNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDF 264
+ L S+ L +K + + + +L ++RD N+L+ D AK+SDF
Sbjct: 276 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG--NNFVHRDLAARNVLVSEDNVAKVSDF 333
Query: 265 GLAKDGPEGDKSHVSTRIMGTY--GYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GR 319
GL K+ ST+ G + APE + + +SDV+SFG++L EI + GR
Sbjct: 334 GLTKEAS-------STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 384
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 16/178 (8%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRV-LIYEFMARGSVE 204
VAVK D + Q +LAE + L H NLV+L+G E++ + ++ E+MA+GS+
Sbjct: 32 VAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 88
Query: 205 NNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDF 264
+ L S+ L +K + + + +L ++RD N+L+ D AK+SDF
Sbjct: 89 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG--NNFVHRDLAARNVLVSEDNVAKVSDF 146
Query: 265 GLAKDGPEGDKSHVSTRIMGTY--GYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GR 319
GL K+ ST+ G + APE + + +SDV+SFG++L EI + GR
Sbjct: 147 GLTKEAS-------STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 197
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 90/175 (51%), Gaps = 15/175 (8%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRV-LIYEFMARGSVE 204
VAVK D + Q +LAE + L H NLV+L+G E++ + ++ E+MA+GS+
Sbjct: 47 VAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 103
Query: 205 NNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDF 264
+ L S+ L +K + + + +L ++RD N+L+ D AK+SDF
Sbjct: 104 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG--NNFVHRDLAARNVLVSEDNVAKVSDF 161
Query: 265 GLAKDGPEGDKSHVSTRIMGTY--GYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
GL K+ ST+ G + APE + + +SDV+SFG++L EI +
Sbjct: 162 GLTKEAS-------STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 16/185 (8%)
Query: 140 GLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMA 199
G + + VA+K + + R++L+E +G HPN++ L G + + ++I E+M
Sbjct: 39 GKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYME 98
Query: 200 RGSVENNLFSK----VLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT 255
GS++ L ++ L +R G G+ +L ++ ++RD NIL+++
Sbjct: 99 NGSLDAFLRKNDGRFTVIQLVGMLR-----GIGSGMKYL--SDMSYVHRDLAARNILVNS 151
Query: 256 DYNAKLSDFGLAK---DGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
+ K+SDFG+++ D PE + +I + APE I T SDV+S+G+V+
Sbjct: 152 NLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTAPEAIAYRKFTSASDVWSYGIVM 209
Query: 313 LEILT 317
E+++
Sbjct: 210 WEVMS 214
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 90/175 (51%), Gaps = 15/175 (8%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRV-LIYEFMARGSVE 204
VAVK D + Q +LAE + L H NLV+L+G E++ + ++ E+MA+GS+
Sbjct: 38 VAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 94
Query: 205 NNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDF 264
+ L S+ L +K + + + +L ++RD N+L+ D AK+SDF
Sbjct: 95 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG--NNFVHRDLAARNVLVSEDNVAKVSDF 152
Query: 265 GLAKDGPEGDKSHVSTRIMGTY--GYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
GL K+ ST+ G + APE + + +SDV+SFG++L EI +
Sbjct: 153 GLTKEAS-------STQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ RG V L + L
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL--QKLSKFDEQRTATYIT 120
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K++DFG + P + T + GT
Sbjct: 121 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 174
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 224
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 225 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 16/185 (8%)
Query: 140 GLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMA 199
G + + VA+K + + R++L+E +G HPN++ L G + + ++I E+M
Sbjct: 33 GKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYME 92
Query: 200 RGSVENNLFSK----VLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT 255
GS++ L ++ L +R G G+ +L ++ ++RD NIL+++
Sbjct: 93 NGSLDAFLRKNDGRFTVIQLVGMLR-----GIGSGMKYL--SDMSYVHRDLAARNILVNS 145
Query: 256 DYNAKLSDFGLAK---DGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
+ K+SDFG+++ D PE + +I + APE I T SDV+S+G+V+
Sbjct: 146 NLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTAPEAIAYRKFTSASDVWSYGIVM 203
Query: 313 LEILT 317
E+++
Sbjct: 204 WEVMS 208
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 124/286 (43%), Gaps = 31/286 (10%)
Query: 118 RVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPN 177
R L VY+G + D+ +G VAVK + S + E+L E + + +
Sbjct: 22 RELGQGSFGMVYEGN-ARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 80
Query: 178 LVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPL--------PWSIRMKIAFGA-- 227
+V+L+G + + +++ E MA G +++ L S L P P +++ I A
Sbjct: 81 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS--LRPEAENNPGRPPPTLQEMIQMAAEI 138
Query: 228 AKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYG 287
A G+A+L+ K ++RD N ++ D+ K+ DFG+ +D E D + +
Sbjct: 139 ADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 288 YAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXXXX 347
+ APE + G T SD++SFGVVL EI + LA+
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 241
Query: 348 XNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVDSLE 393
++D D P + L C NPK RP +IV+ L+
Sbjct: 242 KFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 116/268 (43%), Gaps = 33/268 (12%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMARGSVE 204
VAVK+ D + + + ++E+ + + H N++ L+G C +D +I E+ ++G++
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 107
Query: 205 NNLFSKVLLPLPWSIR--------------MKIAFGAAKGLAFLHEAEKPVIYRDFKTSN 250
L ++ L + + A+ A+G+ +L A K I+RD N
Sbjct: 108 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARN 165
Query: 251 ILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGV 310
+L+ D K++DFGLA+D D +T + APE + T +SDV+SFGV
Sbjct: 166 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV 225
Query: 311 VLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAML 370
+L EI T S P E ++ D P ++ M+
Sbjct: 226 LLWEIFTLGGSPYPGVPVEE----------------LFKLLKEGHRMDKPSNCTNELYMM 269
Query: 371 AYHCLNHNPKARPLMRDIVDSLEPLQVL 398
C + P RP + +V+ L+ + L
Sbjct: 270 MRDCWHAVPSQRPTFKQLVEDLDRIVAL 297
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 108/219 (49%), Gaps = 24/219 (10%)
Query: 108 RIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEV 167
R++T + DRV+ VY G E + + + A+K Q +L E
Sbjct: 20 RVVTHS---DRVIGKGHFGVVYHG---EYIDQAQNRIQCAIKSLSRITEMQQVEAFLREG 73
Query: 168 IFLGHLSHPNLVKLIGYCCEDE---HRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIA 224
+ + L+HPN++ LIG E H +L Y M G + + S P +++ I+
Sbjct: 74 LLMRGLNHPNVLALIGIMLPPEGLPHVLLPY--MCHGDLLQFIRSPQRNP---TVKDLIS 128
Query: 225 FG--AAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGD----KSHV 278
FG A+G+ +L AE+ ++RD N +LD + K++DFGLA+D + + + H
Sbjct: 129 FGLQVARGMEYL--AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHR 186
Query: 279 STRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
R+ + A E + T T +SDV+SFGV+L E+LT
Sbjct: 187 HARL--PVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 85/185 (45%), Gaps = 16/185 (8%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VAVK + S +++ E L L H ++V+ G C E ++++E+M G +
Sbjct: 51 VAVKALK-EASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNR 109
Query: 206 NLFS-----KVLL--------PLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNIL 252
L S K+L PL + +A A G+ +L A ++RD T N L
Sbjct: 110 FLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL--AGLHFVHRDLATRNCL 167
Query: 253 LDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
+ K+ DFG+++D D V R M + PE I+ T SDV+SFGVVL
Sbjct: 168 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVL 227
Query: 313 LEILT 317
EI T
Sbjct: 228 WEIFT 232
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 21/188 (11%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VAVK D + +++ E L +L H ++VK G C + + ++++E+M G +
Sbjct: 48 VAVKALK-DPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDL-- 104
Query: 206 NLFSKVLLP----------------LPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTS 249
N F + P L S + IA A G+ +L A + ++RD T
Sbjct: 105 NKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL--ASQHFVHRDLATR 162
Query: 250 NILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFG 309
N L+ + K+ DFG+++D D V M + PE IM T SDV+SFG
Sbjct: 163 NCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFG 222
Query: 310 VVLLEILT 317
V+L EI T
Sbjct: 223 VILWEIFT 230
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 20/185 (10%)
Query: 142 QPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARG 201
+ + VA+K + + R++L E +G HPN+++L G + + +++ E M G
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENG 131
Query: 202 SVENNL------FSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT 255
S+++ L F+ + L + + G A G+ +L ++ ++RD NIL+++
Sbjct: 132 SLDSFLRKHDAQFTVIQL-------VGMLRGIASGMKYL--SDMGYVHRDLAARNILINS 182
Query: 256 DYNAKLSDFGLAK---DGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
+ K+SDFGL++ D PE + +I + +PE I T SDV+S+G+VL
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 313 LEILT 317
E+++
Sbjct: 241 WEVMS 245
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 85/185 (45%), Gaps = 16/185 (8%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VAVK + S +++ E L L H ++V+ G C E ++++E+M G +
Sbjct: 45 VAVKALK-EASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNR 103
Query: 206 NLFS-----KVLL--------PLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNIL 252
L S K+L PL + +A A G+ +L A ++RD T N L
Sbjct: 104 FLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL--AGLHFVHRDLATRNCL 161
Query: 253 LDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
+ K+ DFG+++D D V R M + PE I+ T SDV+SFGVVL
Sbjct: 162 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVL 221
Query: 313 LEILT 317
EI T
Sbjct: 222 WEIFT 226
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 87/182 (47%), Gaps = 22/182 (12%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRV---LIYEFMARGS 202
VAVK D Q W E+ L L H +++K G CCED L+ E++ GS
Sbjct: 63 VAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKG-CCEDAGAASLQLVMEYVPLGS 121
Query: 203 VENNL------FSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTD 256
+ + L +++LL A +G+A+LH + I+RD N+LLD D
Sbjct: 122 LRDYLPRHSIGLAQLLL---------FAQQICEGMAYLHA--QHYIHRDLAARNVLLDND 170
Query: 257 YNAKLSDFGLAKDGPEGDKSH-VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEI 315
K+ DFGLAK PEG + + V + APE + SDV+SFGV L E+
Sbjct: 171 RLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 230
Query: 316 LT 317
LT
Sbjct: 231 LT 232
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 24/251 (9%)
Query: 146 VAVK-VHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVE 204
VA+K + +G S +++ E + LSHP LV+L G C E L++EFM G +
Sbjct: 34 VAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 90
Query: 205 NNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDF 264
+ L ++ L ++ + + +G+A+L EA VI+RD N L+ + K+SDF
Sbjct: 91 DYLRTQRGLFAAETL-LGMCLDVCEGMAYLEEA--SVIHRDLAARNCLVGENQVIKVSDF 147
Query: 265 GLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDK 324
G+ + + D+ ST +A+PE + +SDV+SFGV++ E+ + K +
Sbjct: 148 GMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 206
Query: 325 SRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPL 384
+R E + PRL + + + HC P+ RP
Sbjct: 207 NRSNSE---------VVEDISTGFRLYKPRLASTHVYQ-------IMNHCWKERPEDRPA 250
Query: 385 MRDIVDSLEPL 395
++ L +
Sbjct: 251 FSRLLRQLAAI 261
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 93/185 (50%), Gaps = 14/185 (7%)
Query: 140 GLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMA 199
G + + VA+K + + R++L+E +G HPN++ L G + ++I EFM
Sbjct: 32 GKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFME 91
Query: 200 RGSVENNLFSK----VLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT 255
GS+++ L ++ L +R G A G+ +L A+ ++R NIL+++
Sbjct: 92 NGSLDSFLRQNDGQFTVIQLVGMLR-----GIAAGMKYL--ADMNYVHRALAARNILVNS 144
Query: 256 DYNAKLSDFGLAKDGPEGDKSHVSTRIMGT---YGYAAPEYIMTGHLTPRSDVYSFGVVL 312
+ K+SDFGL++ + T +G + APE I T SDV+S+G+V+
Sbjct: 145 NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVM 204
Query: 313 LEILT 317
E+++
Sbjct: 205 WEVMS 209
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 112/248 (45%), Gaps = 24/248 (9%)
Query: 146 VAVK-VHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVE 204
VA+K + +G S +++ E + LSHP LV+L G C E L++EFM G +
Sbjct: 32 VAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 88
Query: 205 NNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDF 264
+ L ++ L ++ + + +G+A+L EA VI+RD N L+ + K+SDF
Sbjct: 89 DYLRTQRGLFAAETL-LGMCLDVCEGMAYLEEA--CVIHRDLAARNCLVGENQVIKVSDF 145
Query: 265 GLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDK 324
G+ + + D+ ST +A+PE + +SDV+SFGV++ E+ + K +
Sbjct: 146 GMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 204
Query: 325 SRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPL 384
+R E + PRL + + + HC P+ RP
Sbjct: 205 NRSNSE---------VVEDISTGFRLYKPRLASTHVYQ-------IMNHCWKERPEDRPA 248
Query: 385 MRDIVDSL 392
++ L
Sbjct: 249 FSRLLRQL 256
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 128/306 (41%), Gaps = 31/306 (10%)
Query: 98 PLIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSY 157
P F DE + R L VY+G + D+ +G VAVK + S
Sbjct: 3 PSSVFVPDEWEVSREKITLLRELGQGSFGMVYEGN-ARDIIKGEAETRVAVKTVNESASL 61
Query: 158 QGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPL-- 215
+ E+L E + + ++V+L+G + + +++ E MA G +++ L S L P
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS--LRPEAE 119
Query: 216 ------PWSIRMKIAFGA--AKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLA 267
P +++ I A A G+A+L+ K ++RD N ++ D+ K+ DFG+
Sbjct: 120 NNPGRPPPTLQEMIQMAAEIADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Query: 268 KDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRP 327
+D E + + + APE + G T SD++SFGVVL EI +
Sbjct: 178 RDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------- 227
Query: 328 AREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRD 387
LA+ ++D D P + L C NPK RP +
Sbjct: 228 -----LAEQPYQGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPKMRPTFLE 281
Query: 388 IVDSLE 393
IV+ L+
Sbjct: 282 IVNLLK 287
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 94/184 (51%), Gaps = 29/184 (15%)
Query: 146 VAVK-VHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVE 204
VAVK + G S Q +L E + L H LV+L ++E +I EFMA+GS+
Sbjct: 39 VAVKTLKPGTMSVQA---FLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLL 95
Query: 205 NNLFS----KVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAK 260
+ L S KVLLP +IA +G+A++ K I+RD + +N+L+ K
Sbjct: 96 DFLKSDEGGKVLLPKLIDFSAQIA----EGMAYIER--KNYIHRDLRAANVLVSESLMCK 149
Query: 261 LSDFGLAK-------DGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLL 313
++DFGLA+ EG K + + APE I G T +S+V+SFG++L
Sbjct: 150 IADFGLARVIEDNEYTAREGAKFPIK--------WTAPEAINFGCFTIKSNVWSFGILLY 201
Query: 314 EILT 317
EI+T
Sbjct: 202 EIVT 205
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 19/156 (12%)
Query: 167 VIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFG 226
++F+G+ + P L + +C E L + A E K L+ IA
Sbjct: 83 LLFMGYSTKPQLAIVTQWC---EGSSLYHHLHAS---ETKFEMKKLI--------DIARQ 128
Query: 227 AAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTY 286
A+G+ +LH K +I+RD K++NI L D K+ DFGLA + SH ++ G+
Sbjct: 129 TARGMDYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSI 186
Query: 287 GYAAPEYIMTGHLTP---RSDVYSFGVVLLEILTGR 319
+ APE I P +SDVY+FG+VL E++TG+
Sbjct: 187 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 93/184 (50%), Gaps = 29/184 (15%)
Query: 146 VAVK-VHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVE 204
VAVK + G S Q +L E + L H LV+L +E +I E+MA+GS+
Sbjct: 40 VAVKTLKPGTMSVQA---FLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLL 96
Query: 205 NNLFS----KVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAK 260
+ L S KVLLP +IA +G+A++ K I+RD + +N+L+ K
Sbjct: 97 DFLKSDEGGKVLLPKLIDFSAQIA----EGMAYIER--KNYIHRDLRAANVLVSESLMCK 150
Query: 261 LSDFGLAK-------DGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLL 313
++DFGLA+ EG K + + APE I G T +SDV+SFG++L
Sbjct: 151 IADFGLARVIEDNEYTAREGAKFPIK--------WTAPEAINFGCFTIKSDVWSFGILLY 202
Query: 314 EILT 317
EI+T
Sbjct: 203 EIVT 206
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 112/248 (45%), Gaps = 24/248 (9%)
Query: 146 VAVK-VHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVE 204
VA+K + +G S +++ E + LSHP LV+L G C E L++EFM G +
Sbjct: 37 VAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 93
Query: 205 NNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDF 264
+ L ++ L ++ + + +G+A+L EA VI+RD N L+ + K+SDF
Sbjct: 94 DYLRTQRGLFAAETL-LGMCLDVCEGMAYLEEA--CVIHRDLAARNCLVGENQVIKVSDF 150
Query: 265 GLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDK 324
G+ + + D+ ST +A+PE + +SDV+SFGV++ E+ + K +
Sbjct: 151 GMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 209
Query: 325 SRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPL 384
+R E + PRL + + + HC P+ RP
Sbjct: 210 NRSNSE---------VVEDISTGFRLYKPRLASTHVYQ-------IMNHCWRERPEDRPA 253
Query: 385 MRDIVDSL 392
++ L
Sbjct: 254 FSRLLRQL 261
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 19/164 (11%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
LAE + L H LV+L + E +I E+M GS+ + L + + L + + +
Sbjct: 62 LAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 120
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAK-------DGPEGDKS 276
A A+G+AF+ E + I+RD + +NIL+ + K++DFGLA+ EG K
Sbjct: 121 AAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF 178
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GR 319
+ + APE I G T +SDV+SFG++L EI+T GR
Sbjct: 179 PIK--------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 112/248 (45%), Gaps = 24/248 (9%)
Query: 146 VAVK-VHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVE 204
VA+K + +G S +++ E + LSHP LV+L G C E L++EFM G +
Sbjct: 34 VAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 90
Query: 205 NNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDF 264
+ L ++ L ++ + + +G+A+L EA VI+RD N L+ + K+SDF
Sbjct: 91 DYLRTQRGLFAAETL-LGMCLDVCEGMAYLEEA--CVIHRDLAARNCLVGENQVIKVSDF 147
Query: 265 GLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDK 324
G+ + + D+ ST +A+PE + +SDV+SFGV++ E+ + K +
Sbjct: 148 GMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 206
Query: 325 SRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPL 384
+R E + PRL + + + HC P+ RP
Sbjct: 207 NRSNSE---------VVEDISTGFRLYKPRLASTHVYQ-------IMNHCWKERPEDRPA 250
Query: 385 MRDIVDSL 392
++ L
Sbjct: 251 FSRLLRQL 258
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 85/185 (45%), Gaps = 16/185 (8%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VAVK + S +++ E L L H ++V+ G C E ++++E+M G +
Sbjct: 74 VAVKALK-EASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNR 132
Query: 206 NLFS-----KVLL--------PLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNIL 252
L S K+L PL + +A A G+ +L A ++RD T N L
Sbjct: 133 FLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL--AGLHFVHRDLATRNCL 190
Query: 253 LDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
+ K+ DFG+++D D V R M + PE I+ T SDV+SFGVVL
Sbjct: 191 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVL 250
Query: 313 LEILT 317
EI T
Sbjct: 251 WEIFT 255
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 116/268 (43%), Gaps = 33/268 (12%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMARGSVE 204
VAVK+ D + + + ++E+ + + H N++ L+G C +D +I E+ ++G++
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 205 NNLFSKVLLPLPWSIR--------------MKIAFGAAKGLAFLHEAEKPVIYRDFKTSN 250
L ++ L + + A+ A+G+ +L A K I+RD N
Sbjct: 123 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARN 180
Query: 251 ILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGV 310
+L+ D K++DFGLA+D D +T + APE + T +SDV+SFGV
Sbjct: 181 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV 240
Query: 311 VLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAML 370
+L EI T S P E ++ D P ++ M+
Sbjct: 241 LLWEIFTLGGSPYPGVPVEE----------------LFKLLKEGHRMDKPSNCTNELYMM 284
Query: 371 AYHCLNHNPKARPLMRDIVDSLEPLQVL 398
C + P RP + +V+ L+ + L
Sbjct: 285 MRDCWHAVPSQRPTFKQLVEDLDRIVAL 312
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 19/156 (12%)
Query: 167 VIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFG 226
++F+G+ + P L + +C E L + A E K L+ IA
Sbjct: 83 LLFMGYSTAPQLAIVTQWC---EGSSLYHHLHAS---ETKFEMKKLI--------DIARQ 128
Query: 227 AAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTY 286
A+G+ +LH K +I+RD K++NI L D K+ DFGLA + SH ++ G+
Sbjct: 129 TARGMDYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSI 186
Query: 287 GYAAPEYIMTGHLTP---RSDVYSFGVVLLEILTGR 319
+ APE I P +SDVY+FG+VL E++TG+
Sbjct: 187 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 19/164 (11%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
LAE + L H LV+L + E +I E+M GS+ + L + + L + + +
Sbjct: 64 LAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 122
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAK-------DGPEGDKS 276
A A+G+AF+ E + I+RD + +NIL+ + K++DFGLA+ EG K
Sbjct: 123 AAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF 180
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GR 319
+ + APE I G T +SDV+SFG++L EI+T GR
Sbjct: 181 PIK--------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 216
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 19/164 (11%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
LAE + L H LV+L + E +I E+M GS+ + L + + L + + +
Sbjct: 62 LAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 120
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAK-------DGPEGDKS 276
A A+G+AF+ E + I+RD + +NIL+ + K++DFGLA+ EG K
Sbjct: 121 AAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF 178
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GR 319
+ + APE I G T +SDV+SFG++L EI+T GR
Sbjct: 179 PIK--------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 119/239 (49%), Gaps = 23/239 (9%)
Query: 85 EEVEDLRRDSAANPLIAFTYDELRIITANFRQDRVLXXXXXXCVYKG-FISEDLREGLQP 143
E +E L AN ++A + E R+ +VL V+KG +I E E ++
Sbjct: 9 ESIEPLDPSEKANKVLARIFKE-----TELRKLKVLGSGVFGTVHKGVWIPEG--ESIK- 60
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV 203
+PV +KV + + Q + ++ +G L H ++V+L+G C + L+ +++ GS+
Sbjct: 61 IPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSL 119
Query: 204 ENNL--FSKVLLP---LPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYN 258
+++ L P L W +++ AKG+ +L E +++R+ N+LL +
Sbjct: 120 LDHVRQHRGALGPQLLLNWGVQI------AKGMYYLEE--HGMVHRNLAARNVLLKSPSQ 171
Query: 259 AKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+++DFG+A P DK + + + A E I G T +SDV+S+GV + E++T
Sbjct: 172 VQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 19/164 (11%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
LAE + L H LV+L + E +I E+M GS+ + L + + L + + +
Sbjct: 61 LAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 119
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAK-------DGPEGDKS 276
A A+G+AF+ E + I+RD + +NIL+ + K++DFGLA+ EG K
Sbjct: 120 AAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF 177
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GR 319
+ + APE I G T +SDV+SFG++L EI+T GR
Sbjct: 178 PIK--------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 213
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 8/188 (4%)
Query: 142 QPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARG 201
+ + VA+KV E + E + L +P +V+LIG C+ E +L+ E G
Sbjct: 36 KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAEALMLVMEMAGGG 94
Query: 202 SVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKL 261
+ L K +P S ++ + G+ +L E K ++RD N+LL + AK+
Sbjct: 95 PLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEE--KNFVHRDLAARNVLLVNRHYAKI 151
Query: 262 SDFGLAKDGPEGDKSHVSTRIMGTY--GYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-G 318
SDFGL+K D S+ + R G + + APE I + RSDV+S+GV + E L+ G
Sbjct: 152 SDFGLSK-ALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYG 210
Query: 319 RKSLDKSR 326
+K K +
Sbjct: 211 QKPYKKMK 218
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 119/258 (46%), Gaps = 36/258 (13%)
Query: 146 VAVK-VHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVE 204
VAVK + +G S E+ E + LSHP LVK G C ++ ++ E+++ G +
Sbjct: 35 VAVKMIKEGSMS---EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLL 91
Query: 205 NNLFS--KVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLS 262
N L S K L P S +++ + +G+AFL + I+RD N L+D D K+S
Sbjct: 92 NYLRSHGKGLEP---SQLLEMCYDVCEGMAFLESHQ--FIHRDLAARNCLVDRDLCVKVS 146
Query: 263 DFGLAKDGPEGDKSHVSTRIMGT---YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-G 318
DFG+ + D +VS+ +GT ++APE + +SDV++FG+++ E+ + G
Sbjct: 147 DFGMTRYVL--DDQYVSS--VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLG 202
Query: 319 RKSLDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHN 378
+ D + + P L D + Y C +
Sbjct: 203 KMPYDLYTNSE----------VVLKVSQGHRLYRPHLASD-------TIYQIMYSCWHEL 245
Query: 379 PKARPLMRDIVDSLEPLQ 396
P+ RP + ++ S+EPL+
Sbjct: 246 PEKRPTFQQLLSSIEPLR 263
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 19/164 (11%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
LAE + L H LV+L + E +I E+M GS+ + L + + L + + +
Sbjct: 65 LAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 123
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAK-------DGPEGDKS 276
A A+G+AF+ E + I+RD + +NIL+ + K++DFGLA+ EG K
Sbjct: 124 AAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF 181
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GR 319
+ + APE I G T +SDV+SFG++L EI+T GR
Sbjct: 182 PIK--------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 217
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 19/164 (11%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
LAE + L H LV+L + E +I E+M GS+ + L + + L + + +
Sbjct: 66 LAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 124
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAK-------DGPEGDKS 276
A A+G+AF+ E + I+RD + +NIL+ + K++DFGLA+ EG K
Sbjct: 125 AAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF 182
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GR 319
+ + APE I G T +SDV+SFG++L EI+T GR
Sbjct: 183 PIK--------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 218
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 19/164 (11%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
LAE + L H LV+L + E +I E+M GS+ + L + + L + + +
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 114
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAK-------DGPEGDKS 276
A A+G+AF+ E + I+RD + +NIL+ + K++DFGLA+ EG K
Sbjct: 115 AAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKF 172
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GR 319
+ + APE I G T +SDV+SFG++L EI+T GR
Sbjct: 173 PIK--------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 84/158 (53%), Gaps = 15/158 (9%)
Query: 163 WLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMK 222
+LAE + L H LVKL + E +I EFMA+GS+ + L S P +
Sbjct: 224 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 282
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ A+G+AF+ + + I+RD + +NIL+ K++DFGLA+ G +
Sbjct: 283 FSAQIAEGMAFIEQ--RNYIHRDLRAANILVSASLVCKIADFGLARVGAKF--------- 331
Query: 283 MGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GR 319
+ APE I G T +SDV+SFG++L+EI+T GR
Sbjct: 332 --PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 367
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 19/164 (11%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
LAE + L H LV+L + E +I E+M GS+ + L + + L + + +
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 114
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAK-------DGPEGDKS 276
A A+G+AF+ E + I+RD + +NIL+ + K++DFGLA+ EG K
Sbjct: 115 AAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF 172
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GR 319
+ + APE I G T +SDV+SFG++L EI+T GR
Sbjct: 173 PIK--------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 87/182 (47%), Gaps = 22/182 (12%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHR---VLIYEFMARGS 202
VAVK D Q W E+ L L H +++K G CCED+ L+ E++ GS
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKG-CCEDQGEKSLQLVMEYVPLGS 104
Query: 203 VENNL------FSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTD 256
+ + L +++LL A +G+A+LH I+R+ N+LLD D
Sbjct: 105 LRDYLPRHSIGLAQLLL---------FAQQICEGMAYLHSQH--YIHRNLAARNVLLDND 153
Query: 257 YNAKLSDFGLAKDGPEGDKSH-VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEI 315
K+ DFGLAK PEG + + V + APE + SDV+SFGV L E+
Sbjct: 154 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 213
Query: 316 LT 317
LT
Sbjct: 214 LT 215
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 19/164 (11%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
LAE + L H LV+L + E +I E+M GS+ + L + + L + + +
Sbjct: 57 LAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 115
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAK-------DGPEGDKS 276
A A+G+AF+ E + I+RD + +NIL+ + K++DFGLA+ EG K
Sbjct: 116 AAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF 173
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GR 319
+ + APE I G T +SDV+SFG++L EI+T GR
Sbjct: 174 PIK--------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 209
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 19/164 (11%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
LAE + L H LV+L + E +I E+M GS+ + L + + L + + +
Sbjct: 58 LAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 116
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAK-------DGPEGDKS 276
A A+G+AF+ E + I+RD + +NIL+ + K++DFGLA+ EG K
Sbjct: 117 AAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF 174
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GR 319
+ + APE I G T +SDV+SFG++L EI+T GR
Sbjct: 175 PIK--------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 210
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 19/164 (11%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
LAE + L H LV+L + E +I E+M GS+ + L + + L + + +
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 114
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAK-------DGPEGDKS 276
A A+G+AF+ E + I+RD + +NIL+ + K++DFGLA+ EG K
Sbjct: 115 AAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF 172
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GR 319
+ + APE I G T +SDV+SFG++L EI+T GR
Sbjct: 173 PIK--------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 88/182 (48%), Gaps = 22/182 (12%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHR---VLIYEFMARGS 202
VAVK D Q W E+ L L H +++K G CCED+ L+ E++ GS
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKG-CCEDQGEKSLQLVMEYVPLGS 104
Query: 203 VENNL------FSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTD 256
+ + L +++LL A +G+A+LH + I+R+ N+LLD D
Sbjct: 105 LRDYLPRHSIGLAQLLL---------FAQQICEGMAYLHA--QHYIHRNLAARNVLLDND 153
Query: 257 YNAKLSDFGLAKDGPEGDKSH-VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEI 315
K+ DFGLAK PEG + + V + APE + SDV+SFGV L E+
Sbjct: 154 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 213
Query: 316 LT 317
LT
Sbjct: 214 LT 215
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYIT 141
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K++DFG + P + T + GT
Sbjct: 142 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 195
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 196 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 245
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 246 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 19/164 (11%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
LAE + L H LV+L + E +I E+M GS+ + L + + L + + +
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 114
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAK-------DGPEGDKS 276
A A+G+AF+ E + I+RD + +NIL+ + K++DFGLA+ EG K
Sbjct: 115 AAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF 172
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GR 319
+ + APE I G T +SDV+SFG++L EI+T GR
Sbjct: 173 PIK--------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 87/165 (52%), Gaps = 19/165 (11%)
Query: 163 WLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMK 222
+LAE + L H LV+L + E +I E+M GS+ + L + + L + +
Sbjct: 50 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 108
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAK-------DGPEGDK 275
+A A+G+AF+ E + I+RD + +NIL+ + K++DFGLA+ EG K
Sbjct: 109 MAAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK 166
Query: 276 SHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GR 319
+ + APE I G T +SDV+SFG++L EI+T GR
Sbjct: 167 FPIK--------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 203
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 20/231 (8%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRM 221
+++ E + LSHP LV+L G C E L++EFM G + + L ++ L ++ +
Sbjct: 68 DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-L 126
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
+ +G+A+L EA VI+RD N L+ + K+SDFG+ + + D+ ST
Sbjct: 127 GMCLDVCEGMAYLEEA--CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTG 183
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXX 341
+A+PE + +SDV+SFGV++ E+ + K ++R E
Sbjct: 184 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VV 234
Query: 342 XXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVDSL 392
+ PRL + + + HC P+ RP ++ L
Sbjct: 235 EDISTGFRLYKPRLASTHVYQ-------IMNHCWKERPEDRPAFSRLLRQL 278
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 11/183 (6%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMARGS 202
+ VAVK+ ++E+ + HL H N+V L+G C ++I E+ G
Sbjct: 77 LKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 203 VENNLFSKVLLPL------PWSIRMKIAFGA--AKGLAFLHEAEKPVIYRDFKTSNILLD 254
+ N L K L P +R + F + A+G+AFL A K I+RD N+LL
Sbjct: 137 LLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLT 194
Query: 255 TDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLE 314
+ AK+ DFGLA+D V + APE I T +SDV+S+G++L E
Sbjct: 195 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 254
Query: 315 ILT 317
I +
Sbjct: 255 IFS 257
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 121/252 (48%), Gaps = 34/252 (13%)
Query: 82 SNPEEVED----LRRDSAANPLIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDL 137
S+PEE++D L+RD N LIA ++ + NF R VY+ +
Sbjct: 320 SDPEELKDKKLFLKRD---NLLIA----DIELGCGNFGSVR-------QGVYR------M 359
Query: 138 REGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEF 197
R+ + + VA+KV E + E + L +P +V+LIG C+ E +L+ E
Sbjct: 360 RK--KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAEALMLVMEM 416
Query: 198 MARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDY 257
G + L K +P S ++ + G+ +L E K ++R+ N+LL +
Sbjct: 417 AGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEE--KNFVHRNLAARNVLLVNRH 473
Query: 258 NAKLSDFGLAKDGPEGDKSHVSTRIMGTY--GYAAPEYIMTGHLTPRSDVYSFGVVLLEI 315
AK+SDFGL+K D S+ + R G + + APE I + RSDV+S+GV + E
Sbjct: 474 YAKISDFGLSK-ALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEA 532
Query: 316 LT-GRKSLDKSR 326
L+ G+K K +
Sbjct: 533 LSYGQKPYKKMK 544
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 11/183 (6%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMARGS 202
+ VAVK+ ++E+ + HL H N+V L+G C ++I E+ G
Sbjct: 69 LKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 128
Query: 203 VENNLFSKVLLPL------PWSIRMKIAFGA--AKGLAFLHEAEKPVIYRDFKTSNILLD 254
+ N L K L P +R + F + A+G+AFL A K I+RD N+LL
Sbjct: 129 LLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLT 186
Query: 255 TDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLE 314
+ AK+ DFGLA+D V + APE I T +SDV+S+G++L E
Sbjct: 187 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 246
Query: 315 ILT 317
I +
Sbjct: 247 IFS 249
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 85/164 (51%), Gaps = 19/164 (11%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
LAE + L H LVKL + E +I EFMA+GS+ + L S P +
Sbjct: 58 LAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF 116
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAK-------DGPEGDKS 276
+ A+G+AF+ + + I+RD + +NIL+ K++DFGLA+ EG K
Sbjct: 117 SAQIAEGMAFIEQ--RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF 174
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GR 319
+ + APE I G T +SDV+SFG++L+EI+T GR
Sbjct: 175 PIK--------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 210
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 116/275 (42%), Gaps = 42/275 (15%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VAVK+ + S R+ L+E L ++HP+++KL G C +D +LI E+ GS+
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 206 NLF-SKVLLP---------------------LPWSIRMKIAFGAAKGLAFLHEAEKPVIY 243
L S+ + P L + A+ ++G+ +L AE +++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL--AEMSLVH 173
Query: 244 RDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRS 303
RD NIL+ K+SDFGL++D E D ++ + A E + T +S
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQS 233
Query: 304 DVYSFGVVLLEILT-GRKSLDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVK 362
DV+SFGV+L EI+T G P R NL R+E P
Sbjct: 234 DVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLK---------------TGHRME--RPDN 276
Query: 363 GVHKAAMLAYHCLNHNPKARPLMRDIVDSLEPLQV 397
+ L C P RP+ DI LE + V
Sbjct: 277 CSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 75 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYIT 132
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K++DFG + P + T + GT
Sbjct: 133 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 186
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 187 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 236
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 237 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 273
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 116/275 (42%), Gaps = 42/275 (15%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VAVK+ + S R+ L+E L ++HP+++KL G C +D +LI E+ GS+
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 206 NLF-SKVLLP---------------------LPWSIRMKIAFGAAKGLAFLHEAEKPVIY 243
L S+ + P L + A+ ++G+ +L AE +++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL--AEMKLVH 173
Query: 244 RDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRS 303
RD NIL+ K+SDFGL++D E D ++ + A E + T +S
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQS 233
Query: 304 DVYSFGVVLLEILT-GRKSLDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVK 362
DV+SFGV+L EI+T G P R NL R+E P
Sbjct: 234 DVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLK---------------TGHRME--RPDN 276
Query: 363 GVHKAAMLAYHCLNHNPKARPLMRDIVDSLEPLQV 397
+ L C P RP+ DI LE + V
Sbjct: 277 CSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 92/225 (40%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ RG V L + L
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL--QKLSKFDEQRTATYIT 120
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K++DFG + P + + GT
Sbjct: 121 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLXGT 174
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 224
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 225 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 86/165 (52%), Gaps = 19/165 (11%)
Query: 163 WLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMK 222
+LAE + L H LVKL + E +I EFMA+GS+ + L S P +
Sbjct: 230 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 288
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAK-------DGPEGDK 275
+ A+G+AF+ + + I+RD + +NIL+ K++DFGLA+ EG K
Sbjct: 289 FSAQIAEGMAFIEQ--RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAK 346
Query: 276 SHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GR 319
+ + APE I G T +SDV+SFG++L+EI+T GR
Sbjct: 347 FPIK--------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 383
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYIT 115
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K++DFG + P + T + GT
Sbjct: 116 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TELCGT 169
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 219
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 220 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV L H N++ +GY + + + I GS + + + IA
Sbjct: 74 EVGVLRKTRHVNILLFMGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR 131
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A+G+ +LH K +I+RD K++NI L D K+ DFGLA + SH ++ G+
Sbjct: 132 QTAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGS 189
Query: 286 YGYAAPEYIMTGHLTP---RSDVYSFGVVLLEILTGR 319
+ APE I P +SDVY+FG+VL E++TG+
Sbjct: 190 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 118/272 (43%), Gaps = 33/272 (12%)
Query: 142 QPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMAR 200
+ V VAVK+ D + + + ++E+ + + H N++ L+G C +D +I E+ ++
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 125
Query: 201 GSVENNLFSKVLLPLPWSIRMK--------------IAFGAAKGLAFLHEAEKPVIYRDF 246
G++ L ++ + +S + + A+G+ +L A + I+RD
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDL 183
Query: 247 KTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVY 306
N+L+ + K++DFGLA+D D +T + APE + T +SDV+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 307 SFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHK 366
SFGV++ EI T S P E ++ D P ++
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEE----------------LFKLLKEGHRMDKPANCTNE 287
Query: 367 AAMLAYHCLNHNPKARPLMRDIVDSLEPLQVL 398
M+ C + P RP + +V+ L+ + L
Sbjct: 288 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 116/275 (42%), Gaps = 42/275 (15%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VAVK+ + S R+ L+E L ++HP+++KL G C +D +LI E+ GS+
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 206 NLF-SKVLLP---------------------LPWSIRMKIAFGAAKGLAFLHEAEKPVIY 243
L S+ + P L + A+ ++G+ +L AE +++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL--AEMKLVH 173
Query: 244 RDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRS 303
RD NIL+ K+SDFGL++D E D ++ + A E + T +S
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQS 233
Query: 304 DVYSFGVVLLEILT-GRKSLDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVK 362
DV+SFGV+L EI+T G P R NL R+E P
Sbjct: 234 DVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLK---------------TGHRME--RPDN 276
Query: 363 GVHKAAMLAYHCLNHNPKARPLMRDIVDSLEPLQV 397
+ L C P RP+ DI LE + V
Sbjct: 277 CSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 84/163 (51%), Gaps = 19/163 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNL------FSKVLLPLPWSI 219
EV L H N++ +GY + + ++ ++ S+ ++L F + L
Sbjct: 54 EVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKL------ 106
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ IA A+G+ +LH K +I+RD K++NI L D K+ DFGLA + SH
Sbjct: 107 -IDIARQTAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 163
Query: 280 TRIMGTYGYAAPEYIMTGHLTP---RSDVYSFGVVLLEILTGR 319
++ G+ + APE I P +SDVY+FG+VL E++TG+
Sbjct: 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYIT 118
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K++DFG + P + T + GT
Sbjct: 119 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 172
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 222
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 223 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYIT 115
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K++DFG + P + T + GT
Sbjct: 116 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 169
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 219
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 220 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV L H N++ +GY + + + I GS + + + IA
Sbjct: 82 EVGVLRKTRHVNILLFMGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR 139
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A+G+ +LH K +I+RD K++NI L D K+ DFGLA + SH ++ G+
Sbjct: 140 QTAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGS 197
Query: 286 YGYAAPEYIMTGHLTP---RSDVYSFGVVLLEILTGR 319
+ APE I P +SDVY+FG+VL E++TG+
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYIT 120
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K++DFG + P + T + GT
Sbjct: 121 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 174
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 224
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 225 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 78/156 (50%), Gaps = 19/156 (12%)
Query: 167 VIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFG 226
++F+G+ + P L + +C E L + A E K L+ IA
Sbjct: 71 LLFMGYSTKPQLAIVTQWC---EGSSLYHHLHAS---ETKFEMKKLI--------DIARQ 116
Query: 227 AAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTY 286
A+G+ +LH K +I+RD K++NI L D K+ DFGLA SH ++ G+
Sbjct: 117 TARGMDYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSI 174
Query: 287 GYAAPEYIMTGHLTP---RSDVYSFGVVLLEILTGR 319
+ APE I P +SDVY+FG+VL E++TG+
Sbjct: 175 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 111/248 (44%), Gaps = 24/248 (9%)
Query: 146 VAVK-VHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVE 204
VA+K + +G S +++ E + LSHP LV+L G C E L+ EFM G +
Sbjct: 35 VAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLS 91
Query: 205 NNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDF 264
+ L ++ L ++ + + +G+A+L EA VI+RD N L+ + K+SDF
Sbjct: 92 DYLRTQRGLFAAETL-LGMCLDVCEGMAYLEEA--CVIHRDLAARNCLVGENQVIKVSDF 148
Query: 265 GLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDK 324
G+ + + D+ ST +A+PE + +SDV+SFGV++ E+ + K +
Sbjct: 149 GMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 207
Query: 325 SRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPL 384
+R E + PRL + + + HC P+ RP
Sbjct: 208 NRSNSE---------VVEDISTGFRLYKPRLASTHVYQ-------IMNHCWRERPEDRPA 251
Query: 385 MRDIVDSL 392
++ L
Sbjct: 252 FSRLLRQL 259
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 128/306 (41%), Gaps = 31/306 (10%)
Query: 98 PLIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSY 157
P + DE + R L VY+G + D+ +G VAVK + S
Sbjct: 3 PSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGN-ARDIIKGEAETRVAVKTVNESASL 61
Query: 158 QGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPL-- 215
+ E+L E + + ++V+L+G + + +++ E MA G +++ L S L P
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS--LRPEAE 119
Query: 216 ------PWSIRMKIAFGA--AKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLA 267
P +++ I A A G+A+L+ K ++R+ N ++ D+ K+ DFG+
Sbjct: 120 NNPGRPPPTLQEMIQMAAEIADGMAYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMT 177
Query: 268 KDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRP 327
+D E D + + + APE + G T SD++SFGVVL EI +
Sbjct: 178 RDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------- 227
Query: 328 AREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRD 387
LA+ ++D D P + L C NP RP +
Sbjct: 228 -----LAEQPYQGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPNMRPTFLE 281
Query: 388 IVDSLE 393
IV+ L+
Sbjct: 282 IVNLLK 287
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 94/225 (41%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYIT 116
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K++DFG + P ++ +S GT
Sbjct: 117 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS----GT 170
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 220
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 221 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 118/272 (43%), Gaps = 33/272 (12%)
Query: 142 QPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMAR 200
+ V VAVK+ D + + + ++E+ + + H N++ L+G C +D +I E+ ++
Sbjct: 53 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 112
Query: 201 GSVENNLFSKVLLPLPWSIRMK--------------IAFGAAKGLAFLHEAEKPVIYRDF 246
G++ L ++ + +S + + A+G+ +L A + I+RD
Sbjct: 113 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDL 170
Query: 247 KTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVY 306
N+L+ + K++DFGLA+D D +T + APE + T +SDV+
Sbjct: 171 TARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 230
Query: 307 SFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHK 366
SFGV++ EI T S P E ++ D P ++
Sbjct: 231 SFGVLMWEIFTLGGSPYPGIPVEE----------------LFKLLKEGHRMDKPANCTNE 274
Query: 367 AAMLAYHCLNHNPKARPLMRDIVDSLEPLQVL 398
M+ C + P RP + +V+ L+ + L
Sbjct: 275 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 306
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 91/194 (46%), Gaps = 24/194 (12%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-- 203
VAVK+ + S ++ E + +PN+VKL+G C + L++E+MA G +
Sbjct: 80 VAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNE 139
Query: 204 --------------ENNLFSKVLL------PLPWSIRMKIAFGAAKGLAFLHEAEKPVIY 243
++L ++ + PL + ++ IA A G+A+L +E+ ++
Sbjct: 140 FLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL--SERKFVH 197
Query: 244 RDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRS 303
RD T N L+ + K++DFGL+++ D + PE I T S
Sbjct: 198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTES 257
Query: 304 DVYSFGVVLLEILT 317
DV+++GVVL EI +
Sbjct: 258 DVWAYGVVLWEIFS 271
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 128/306 (41%), Gaps = 31/306 (10%)
Query: 98 PLIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSY 157
P + DE + R L VY+G + D+ +G VAVK + S
Sbjct: 4 PSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGN-ARDIIKGEAETRVAVKTVNESASL 62
Query: 158 QGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPL-- 215
+ E+L E + + ++V+L+G + + +++ E MA G +++ L S L P
Sbjct: 63 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS--LRPEAE 120
Query: 216 ------PWSIRMKIAFGA--AKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLA 267
P +++ I A A G+A+L+ K ++R+ N ++ D+ K+ DFG+
Sbjct: 121 NNPGRPPPTLQEMIQMAAEIADGMAYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMT 178
Query: 268 KDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRP 327
+D E D + + + APE + G T SD++SFGVVL EI +
Sbjct: 179 RDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------- 228
Query: 328 AREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRD 387
LA+ ++D D P + L C NP RP +
Sbjct: 229 -----LAEQPYQGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPNMRPTFLE 282
Query: 388 IVDSLE 393
IV+ L+
Sbjct: 283 IVNLLK 288
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 25/234 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+K S + ++E L
Sbjct: 9 LRILKETEFKKIKVLSSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEIL 65
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN--W 122
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ AKG+ +L + + +++RD N+L+ T + K++DFGLAK +K +
Sbjct: 123 CVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + A E I+ T +SDV+S+GV + E++T G K D PA E
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 227
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 118/272 (43%), Gaps = 33/272 (12%)
Query: 142 QPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMAR 200
+ V VAVK+ D + + + ++E+ + + H N++ L+G C +D +I E+ ++
Sbjct: 58 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 117
Query: 201 GSVENNLFSKVLLPLPWSIRMK--------------IAFGAAKGLAFLHEAEKPVIYRDF 246
G++ L ++ + +S + + A+G+ +L A + I+RD
Sbjct: 118 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDL 175
Query: 247 KTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVY 306
N+L+ + K++DFGLA+D D +T + APE + T +SDV+
Sbjct: 176 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 235
Query: 307 SFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHK 366
SFGV++ EI T S P E ++ D P ++
Sbjct: 236 SFGVLMWEIFTLGGSPYPGIPVEE----------------LFKLLKEGHRMDKPANCTNE 279
Query: 367 AAMLAYHCLNHNPKARPLMRDIVDSLEPLQVL 398
M+ C + P RP + +V+ L+ + L
Sbjct: 280 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 311
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYIT 116
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K++DFG + P + T + GT
Sbjct: 117 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGT 170
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 220
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 221 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 25/234 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+K S + ++E L
Sbjct: 9 LRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEIL 65
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLN--W 122
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ AKG+ +L + + +++RD N+L+ T + K++DFGLAK +K +
Sbjct: 123 CVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + A E I+ T +SDV+S+GV + E++T G K D PA E
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 227
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 118/272 (43%), Gaps = 33/272 (12%)
Query: 142 QPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMAR 200
+ V VAVK+ D + + + ++E+ + + H N++ L+G C +D +I E+ ++
Sbjct: 66 EAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 125
Query: 201 GSVENNLFSKVLLPLPWSIRMK--------------IAFGAAKGLAFLHEAEKPVIYRDF 246
G++ L ++ + +S + + A+G+ +L A + I+RD
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDL 183
Query: 247 KTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVY 306
N+L+ + K++DFGLA+D D +T + APE + T +SDV+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 307 SFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHK 366
SFGV++ EI T S P E ++ D P ++
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEE----------------LFKLLKEGHRMDKPANCTNE 287
Query: 367 AAMLAYHCLNHNPKARPLMRDIVDSLEPLQVL 398
M+ C + P RP + +V+ L+ + L
Sbjct: 288 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYIT 115
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K++DFG + P + T + GT
Sbjct: 116 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGT 169
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 219
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 220 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 118/272 (43%), Gaps = 33/272 (12%)
Query: 142 QPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMAR 200
+ V VAVK+ D + + + ++E+ + + H N++ L+G C +D +I E+ ++
Sbjct: 55 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 114
Query: 201 GSVENNLFSKVLLPLPWSIRMK--------------IAFGAAKGLAFLHEAEKPVIYRDF 246
G++ L ++ + +S + + A+G+ +L A + I+RD
Sbjct: 115 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDL 172
Query: 247 KTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVY 306
N+L+ + K++DFGLA+D D +T + APE + T +SDV+
Sbjct: 173 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 232
Query: 307 SFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHK 366
SFGV++ EI T S P E ++ D P ++
Sbjct: 233 SFGVLMWEIFTLGGSPYPGIPVEE----------------LFKLLKEGHRMDKPANCTNE 276
Query: 367 AAMLAYHCLNHNPKARPLMRDIVDSLEPLQVL 398
M+ C + P RP + +V+ L+ + L
Sbjct: 277 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 308
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 25/234 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+K S + ++E L
Sbjct: 13 LRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEIL 69
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 70 DEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLN--W 126
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ AKG+ +L + + +++RD N+L+ T + K++DFGLAK +K +
Sbjct: 127 CVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 178
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + A E I+ T +SDV+S+GV + E++T G K D PA E
Sbjct: 179 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 231
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 25/234 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+K S + ++E L
Sbjct: 16 LRILKETEFKKIKVLSSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEIL 72
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 73 DEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLN--W 129
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ AKG+ +L + + +++RD N+L+ T + K++DFGLAK +K +
Sbjct: 130 CVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 181
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + A E I+ T +SDV+S+GV + E++T G K D PA E
Sbjct: 182 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 234
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 25/234 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+K S + ++E L
Sbjct: 10 LRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEIL 66
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 67 DEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLN--W 123
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ AKG+ +L + + +++RD N+L+ T + K++DFGLAK +K +
Sbjct: 124 CVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 175
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + A E I+ T +SDV+S+GV + E++T G K D PA E
Sbjct: 176 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 228
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 25/234 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+K S + ++E L
Sbjct: 19 LRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEIL 75
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 76 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN--W 132
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ AKG+ +L + + +++RD N+L+ T + K++DFGLAK +K +
Sbjct: 133 CVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 184
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + A E I+ T +SDV+S+GV + E++T G K D PA E
Sbjct: 185 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 237
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 25/234 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+K S + ++E L
Sbjct: 10 LRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEIL 66
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 67 DEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLN--W 123
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ AKG+ +L + + +++RD N+L+ T + K++DFGLAK +K +
Sbjct: 124 CVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 175
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + A E I+ T +SDV+S+GV + E++T G K D PA E
Sbjct: 176 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 228
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYIT 120
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K++DFG + P + T + GT
Sbjct: 121 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGT 174
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 224
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 225 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 25/234 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+K S + ++E L
Sbjct: 16 LRILKETEFKKIKVLSSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEIL 72
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 73 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN--W 129
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ AKG+ +L + + +++RD N+L+ T + K++DFGLAK +K +
Sbjct: 130 CVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 181
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + A E I+ T +SDV+S+GV + E++T G K D PA E
Sbjct: 182 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 234
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 25/234 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+K S + ++E L
Sbjct: 11 LRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEIL 67
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLN--W 124
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ AKG+ +L + + +++RD N+L+ T + K++DFGLAK +K +
Sbjct: 125 CVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 176
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + A E I+ T +SDV+S+GV + E++T G K D PA E
Sbjct: 177 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 229
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 57 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYIT 114
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K++DFG + P + T + GT
Sbjct: 115 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 168
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 169 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 218
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 219 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 255
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYIT 115
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K++DFG + P + T + GT
Sbjct: 116 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGT 169
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 219
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 220 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 25/234 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+K S + ++E L
Sbjct: 12 LRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEIL 68
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 69 DEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLN--W 125
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ AKG+ +L + + +++RD N+L+ T + K++DFGLAK +K +
Sbjct: 126 CVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + A E I+ T +SDV+S+GV + E++T G K D PA E
Sbjct: 178 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 230
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 118/272 (43%), Gaps = 33/272 (12%)
Query: 142 QPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMAR 200
+ V VAVK+ D + + + ++E+ + + H N++ L+G C +D +I E+ ++
Sbjct: 112 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 171
Query: 201 GSVENNLFSKVLLPLPWSIRMK--------------IAFGAAKGLAFLHEAEKPVIYRDF 246
G++ L ++ + +S + + A+G+ +L A + I+RD
Sbjct: 172 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDL 229
Query: 247 KTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVY 306
N+L+ + K++DFGLA+D D +T + APE + T +SDV+
Sbjct: 230 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 289
Query: 307 SFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHK 366
SFGV++ EI T S P E ++ D P ++
Sbjct: 290 SFGVLMWEIFTLGGSPYPGIPVEE----------------LFKLLKEGHRMDKPANCTNE 333
Query: 367 AAMLAYHCLNHNPKARPLMRDIVDSLEPLQVL 398
M+ C + P RP + +V+ L+ + L
Sbjct: 334 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 25/234 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+K S + ++E L
Sbjct: 9 LRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEIL 65
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN--W 122
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ AKG+ +L + + +++RD N+L+ T + K++DFGLAK +K +
Sbjct: 123 CVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + A E I+ T +SDV+S+GV + E++T G K D PA E
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 227
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 25/234 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+K S + ++E L
Sbjct: 15 LRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEIL 71
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 72 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN--W 128
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ AKG+ +L + + +++RD N+L+ T + K++DFGLAK +K +
Sbjct: 129 CVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 180
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + A E I+ T +SDV+S+GV + E++T G K D PA E
Sbjct: 181 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 233
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 87/165 (52%), Gaps = 19/165 (11%)
Query: 163 WLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMK 222
+LAE + L H LV+L + E +I E+M GS+ + L + + L + +
Sbjct: 51 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 109
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAK-------DGPEGDK 275
+A A+G+AF+ E + I+R+ + +NIL+ + K++DFGLA+ EG K
Sbjct: 110 MAAQIAEGMAFIEE--RNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK 167
Query: 276 SHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GR 319
+ + APE I G T +SDV+SFG++L EI+T GR
Sbjct: 168 FPIK--------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 204
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 25/234 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+K S + ++E L
Sbjct: 9 LRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEIL 65
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLN--W 122
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ AKG+ +L + + +++RD N+L+ T + K++DFGLAK +K +
Sbjct: 123 CVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + A E I+ T +SDV+S+GV + E++T G K D PA E
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 227
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 118/272 (43%), Gaps = 33/272 (12%)
Query: 142 QPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMAR 200
+ V VAVK+ D + + + ++E+ + + H N++ L+G C +D +I E+ ++
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASK 125
Query: 201 GSVENNLFSKVLLPLPWSIRMK--------------IAFGAAKGLAFLHEAEKPVIYRDF 246
G++ L ++ + +S + + A+G+ +L A + I+RD
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDL 183
Query: 247 KTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVY 306
N+L+ + K++DFGLA+D D +T + APE + T +SDV+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 307 SFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHK 366
SFGV++ EI T S P E ++ D P ++
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEE----------------LFKLLKEGHRMDKPANCTNE 287
Query: 367 AAMLAYHCLNHNPKARPLMRDIVDSLEPLQVL 398
M+ C + P RP + +V+ L+ + L
Sbjct: 288 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 25/234 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+K S + ++E L
Sbjct: 11 LRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEIL 67
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN--W 124
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ AKG+ +L + + +++RD N+L+ T + K++DFGLAK +K +
Sbjct: 125 CVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 176
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + A E I+ T +SDV+S+GV + E++T G K D PA E
Sbjct: 177 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 229
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYIT 118
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K++DFG + P + T + GT
Sbjct: 119 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 172
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 222
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 223 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 25/234 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+K S + ++E L
Sbjct: 9 LRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEIL 65
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN--W 122
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ AKG+ +L + + +++RD N+L+ T + K++DFGLAK +K +
Sbjct: 123 CVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + A E I+ T +SDV+S+GV + E++T G K D PA E
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 227
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 25/234 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+K S + ++E L
Sbjct: 12 LRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEIL 68
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 69 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN--W 125
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ AKG+ +L + + +++RD N+L+ T + K++DFGLAK +K +
Sbjct: 126 CVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + A E I+ T +SDV+S+GV + E++T G K D PA E
Sbjct: 178 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 230
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 92/225 (40%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYIT 120
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K++DFG + P + T + GT
Sbjct: 121 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 174
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 175 LDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 224
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP +R++++
Sbjct: 225 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPXLREVLE 261
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 25/234 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+K S + ++E L
Sbjct: 34 LRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEIL 90
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 91 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN--W 147
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ AKG+ +L + + +++RD N+L+ T + K++DFGLAK +K +
Sbjct: 148 CVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 199
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + A E I+ T +SDV+S+GV + E++T G K D PA E
Sbjct: 200 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 252
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
Query: 128 VYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCE 187
VY+G +S + P+ VAVK S Q ++L E + + L+H N+V+ IG +
Sbjct: 47 VYEGQVS-GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQ 105
Query: 188 DEHRVLIYEFMARGSVENNLFSKVLLP-LPWSIRM----KIAFGAAKGLAFLHEAEKPVI 242
R ++ E MA G +++ L P P S+ M +A A G +L E I
Sbjct: 106 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FI 163
Query: 243 YRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHL 299
+RD N LL AK+ DFG+A+D M + PE M G
Sbjct: 164 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 223
Query: 300 TPRSDVYSFGVVLLEILT 317
T ++D +SFGV+L EI +
Sbjct: 224 TSKTDTWSFGVLLWEIFS 241
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYIT 119
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K++DFG + P + T + GT
Sbjct: 120 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 173
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 223
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 224 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 260
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 25/234 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+K S + ++E L
Sbjct: 12 LRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEIL 68
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 69 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN--W 125
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ AKG+ +L + + +++RD N+L+ T + K++DFGLAK +K +
Sbjct: 126 CVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + A E I+ T +SDV+S+GV + E++T G K D PA E
Sbjct: 178 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 230
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYIT 115
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K++DFG + P + T + GT
Sbjct: 116 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TXLCGT 169
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 219
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 220 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 118/272 (43%), Gaps = 33/272 (12%)
Query: 142 QPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMAR 200
+ V VAVK+ D + + + ++E+ + + H N++ L+G C +D +I E+ ++
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 125
Query: 201 GSVENNLFSKVLLPLPWSIRMK--------------IAFGAAKGLAFLHEAEKPVIYRDF 246
G++ L ++ + +S + + A+G+ +L A + I+RD
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDL 183
Query: 247 KTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVY 306
N+L+ + K++DFGLA+D D +T + APE + T +SDV+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 307 SFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHK 366
SFGV++ EI T S P E ++ D P ++
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEE----------------LFKLLKEGHRMDKPANCTNE 287
Query: 367 AAMLAYHCLNHNPKARPLMRDIVDSLEPLQVL 398
M+ C + P RP + +V+ L+ + L
Sbjct: 288 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 55 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYIT 112
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K++DFG + P + T + GT
Sbjct: 113 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 166
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 167 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 216
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 217 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 253
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 25/234 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+K S + ++E L
Sbjct: 16 LRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEIL 72
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 73 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN--W 129
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ AKG+ +L + + +++RD N+L+ T + K++DFGLAK +K +
Sbjct: 130 CVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 181
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + A E I+ T +SDV+S+GV + E++T G K D PA E
Sbjct: 182 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 234
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 25/234 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+K S + ++E L
Sbjct: 12 LRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEIL 68
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 69 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN--W 125
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ AKG+ +L + + +++RD N+L+ T + K++DFGLAK +K +
Sbjct: 126 CVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + A E I+ T +SDV+S+GV + E++T G K D PA E
Sbjct: 178 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 230
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 92/225 (40%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYIT 141
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K++DFG + P + + GT
Sbjct: 142 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD----LCGT 195
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 196 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 245
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 246 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 25/234 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+K S + ++E L
Sbjct: 3 LRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEIL 59
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 60 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN--W 116
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ AKG+ +L + + +++RD N+L+ T + K++DFGLAK +K +
Sbjct: 117 CVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 168
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + A E I+ T +SDV+S+GV + E++T G K D PA E
Sbjct: 169 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 221
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 105/246 (42%), Gaps = 24/246 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VAVK+ D + E+ L+H N+VK G+ E + L E+ + G + +
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFG 265
+ + +P P + R A G+ +LH + +RD K N+LLD N K+SDFG
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMA--GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFG 149
Query: 266 LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTG--HLTPRSDVYSFGVVLLEILTGRKSLD 323
LA ++ + ++ GT Y APE + H P DV+S G+VL +L G D
Sbjct: 150 LATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWD 208
Query: 324 KSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYH-CLNHNPKAR 382
+ + Q +DW P K + A + H L NP AR
Sbjct: 209 QPSDS-XQEYSDWKEKKTYLN---------------PWKKIDSAPLALLHKILVENPSAR 252
Query: 383 PLMRDI 388
+ DI
Sbjct: 253 ITIPDI 258
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
Query: 128 VYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCE 187
VY+G +S + P+ VAVK S Q ++L E + + L+H N+V+ IG +
Sbjct: 61 VYEGQVS-GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQ 119
Query: 188 DEHRVLIYEFMARGSVENNLFSKVLLP-LPWSIRM----KIAFGAAKGLAFLHEAEKPVI 242
R ++ E MA G +++ L P P S+ M +A A G +L E I
Sbjct: 120 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FI 177
Query: 243 YRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHL 299
+RD N LL AK+ DFG+A+D M + PE M G
Sbjct: 178 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 237
Query: 300 TPRSDVYSFGVVLLEILT 317
T ++D +SFGV+L EI +
Sbjct: 238 TSKTDTWSFGVLLWEIFS 255
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 119/272 (43%), Gaps = 33/272 (12%)
Query: 142 QPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMAR 200
+ V VAVK+ D + + + ++E+ + + H N++ L+G C +D +I E+ ++
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 125
Query: 201 GSVENNLFSKV-----------LLP---LPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDF 246
G++ L ++ +P + + + + A+G+ +L A + I+RD
Sbjct: 126 GNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDL 183
Query: 247 KTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVY 306
N+L+ + K++DFGLA+D D +T + APE + T +SDV+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 307 SFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHK 366
SFGV++ EI T S P E ++ D P ++
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEE----------------LFKLLKEGHRMDKPANCTNE 287
Query: 367 AAMLAYHCLNHNPKARPLMRDIVDSLEPLQVL 398
M+ C + P RP + +V+ L+ + L
Sbjct: 288 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 118/272 (43%), Gaps = 33/272 (12%)
Query: 142 QPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMAR 200
+ V VAVK+ D + + + ++E+ + + H N++ L+G C +D +I E+ ++
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASK 125
Query: 201 GSVENNLFSKVLLPLPWSIRMK--------------IAFGAAKGLAFLHEAEKPVIYRDF 246
G++ L ++ + +S + + A+G+ +L A + I+RD
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDL 183
Query: 247 KTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVY 306
N+L+ + K++DFGLA+D D +T + APE + T +SDV+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 307 SFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHK 366
SFGV++ EI T S P E ++ D P ++
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEE----------------LFKLLKEGHRMDKPANCTNE 287
Query: 367 AAMLAYHCLNHNPKARPLMRDIVDSLEPLQVL 398
M+ C + P RP + +V+ L+ + L
Sbjct: 288 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
Query: 170 LGHLSHPNLVKLIGYCCEDEHRV-LIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAA 228
L ++HP +VKL Y + E ++ LI +F+ G + L +V+ + F A
Sbjct: 80 LVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF-----TEEDVKFYLA 133
Query: 229 K-GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYG 287
+ LA H +IYRD K NILLD + + KL+DFGL+K+ + +K S GT
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVE 191
Query: 288 YAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
Y APE + T +D +SFGV++ E+LTG
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYIT 117
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K+++FG + P + T + GT
Sbjct: 118 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGT 171
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 172 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 221
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 222 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 105/246 (42%), Gaps = 24/246 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VAVK+ D + E+ L+H N+VK G+ E + L E+ + G + +
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFG 265
+ + +P P + R A G+ +LH + +RD K N+LLD N K+SDFG
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMA--GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFG 150
Query: 266 LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTG--HLTPRSDVYSFGVVLLEILTGRKSLD 323
LA ++ + ++ GT Y APE + H P DV+S G+VL +L G D
Sbjct: 151 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWD 209
Query: 324 KSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYH-CLNHNPKAR 382
+ + Q +DW P K + A + H L NP AR
Sbjct: 210 QPSDSC-QEYSDWKEKKTYLN---------------PWKKIDSAPLALLHKILVENPSAR 253
Query: 383 PLMRDI 388
+ DI
Sbjct: 254 ITIPDI 259
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 77/157 (49%), Gaps = 7/157 (4%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV L H N++ +GY + + + I GS + + + IA
Sbjct: 81 EVGVLRKTRHVNILLFMGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR 138
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A+G+ +LH K +I+RD K++NI L D K+ DFGLA SH ++ G+
Sbjct: 139 QTAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 196
Query: 286 YGYAAPEYIMTGHLTP---RSDVYSFGVVLLEILTGR 319
+ APE I P +SDVY+FG+VL E++TG+
Sbjct: 197 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 83/163 (50%), Gaps = 19/163 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNL------FSKVLLPLPWSI 219
EV L H N++ +GY + + ++ ++ S+ ++L F + L
Sbjct: 56 EVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKL------ 108
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ IA A+G+ +LH K +I+RD K++NI L D K+ DFGLA SH
Sbjct: 109 -IDIARQTAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 165
Query: 280 TRIMGTYGYAAPEYIMTGHLTP---RSDVYSFGVVLLEILTGR 319
++ G+ + APE I P +SDVY+FG+VL E++TG+
Sbjct: 166 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 77/157 (49%), Gaps = 7/157 (4%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV L H N++ +GY + + + I GS + + + IA
Sbjct: 82 EVGVLRKTRHVNILLFMGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR 139
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A+G+ +LH K +I+RD K++NI L D K+ DFGLA SH ++ G+
Sbjct: 140 QTAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 197
Query: 286 YGYAAPEYIMTGHLTP---RSDVYSFGVVLLEILTGR 319
+ APE I P +SDVY+FG+VL E++TG+
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 83/163 (50%), Gaps = 19/163 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNL------FSKVLLPLPWSI 219
EV L H N++ +GY + + ++ ++ S+ ++L F + L
Sbjct: 59 EVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKL------ 111
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ IA A+G+ +LH K +I+RD K++NI L D K+ DFGLA SH
Sbjct: 112 -IDIARQTAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 168
Query: 280 TRIMGTYGYAAPEYIMTGHLTP---RSDVYSFGVVLLEILTGR 319
++ G+ + APE I P +SDVY+FG+VL E++TG+
Sbjct: 169 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 83/163 (50%), Gaps = 19/163 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNL------FSKVLLPLPWSI 219
EV L H N++ +GY + + ++ ++ S+ ++L F + L
Sbjct: 59 EVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKL------ 111
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ IA A+G+ +LH K +I+RD K++NI L D K+ DFGLA SH
Sbjct: 112 -IDIARQTAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 168
Query: 280 TRIMGTYGYAAPEYIMTGHLTP---RSDVYSFGVVLLEILTGR 319
++ G+ + APE I P +SDVY+FG+VL E++TG+
Sbjct: 169 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 84/160 (52%), Gaps = 16/160 (10%)
Query: 161 REWLAEVIFLGHLSHPNLVKLIGYCCEDEHRV-LIYEFMARGSVENNLFSKVLLPLPWSI 219
R+ L EV +HP +VKL Y + E ++ LI +F+ G + L +V+
Sbjct: 78 RDILVEV------NHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT----- 125
Query: 220 RMKIAFGAAK-GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHV 278
+ F A+ LA H +IYRD K NILLD + + KL+DFGL+K+ + +K
Sbjct: 126 EEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY 185
Query: 279 STRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
S GT Y APE + T +D +SFGV++ E+LTG
Sbjct: 186 S--FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 118/272 (43%), Gaps = 33/272 (12%)
Query: 142 QPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMAR 200
+ V VAVK+ D + + + ++E+ + + H N++ L+G C +D +I E+ ++
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 125
Query: 201 GSVENNLFSKVLLPLPWSIRMK--------------IAFGAAKGLAFLHEAEKPVIYRDF 246
G++ L ++ + +S + + A+G+ +L A + I+RD
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDL 183
Query: 247 KTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVY 306
N+L+ + +++DFGLA+D D +T + APE + T +SDV+
Sbjct: 184 AARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 307 SFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHK 366
SFGV++ EI T S P E ++ D P ++
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEE----------------LFKLLKEGHRMDKPANCTNE 287
Query: 367 AAMLAYHCLNHNPKARPLMRDIVDSLEPLQVL 398
M+ C + P RP + +V+ L+ + L
Sbjct: 288 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 84/160 (52%), Gaps = 16/160 (10%)
Query: 161 REWLAEVIFLGHLSHPNLVKLIGYCCEDEHRV-LIYEFMARGSVENNLFSKVLLPLPWSI 219
R+ L EV +HP +VKL Y + E ++ LI +F+ G + L +V+
Sbjct: 77 RDILVEV------NHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT----- 124
Query: 220 RMKIAFGAAK-GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHV 278
+ F A+ LA H +IYRD K NILLD + + KL+DFGL+K+ + +K
Sbjct: 125 EEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY 184
Query: 279 STRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
S GT Y APE + T +D +SFGV++ E+LTG
Sbjct: 185 S--FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 105/246 (42%), Gaps = 24/246 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VAVK+ D + E+ L+H N+VK G+ E + L E+ + G + +
Sbjct: 33 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 92
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFG 265
+ + +P P + R A G+ +LH + +RD K N+LLD N K+SDFG
Sbjct: 93 RIEPDIGMPEPDAQRFFHQLMA--GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFG 148
Query: 266 LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTG--HLTPRSDVYSFGVVLLEILTGRKSLD 323
LA ++ + ++ GT Y APE + H P DV+S G+VL +L G D
Sbjct: 149 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWD 207
Query: 324 KSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYH-CLNHNPKAR 382
+ + Q +DW P K + A + H L NP AR
Sbjct: 208 QPSDSC-QEYSDWKEKKTYLN---------------PWKKIDSAPLALLHKILVENPSAR 251
Query: 383 PLMRDI 388
+ DI
Sbjct: 252 ITIPDI 257
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 83/163 (50%), Gaps = 19/163 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNL------FSKVLLPLPWSI 219
EV L H N++ +GY + + ++ ++ S+ ++L F + L
Sbjct: 54 EVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKL------ 106
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ IA A+G+ +LH K +I+RD K++NI L D K+ DFGLA SH
Sbjct: 107 -IDIARQTAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 163
Query: 280 TRIMGTYGYAAPEYIMTGHLTP---RSDVYSFGVVLLEILTGR 319
++ G+ + APE I P +SDVY+FG+VL E++TG+
Sbjct: 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 89/188 (47%), Gaps = 18/188 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHP-NLVKLIGYCCEDEHRVL-IYEFMARGSV 203
VAVK+ ++ HR ++E+ L H+ H N+V L+G C + ++ I EF G++
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 204 ENNLFSKVLLPLPWSIR--------------MKIAFGAAKGLAFLHEAEKPVIYRDFKTS 249
L SK +P+ + + +F AKG+ FL A + I+RD
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAAR 177
Query: 250 NILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFG 309
NILL K+ DFGLA+D + + APE I T +SDV+SFG
Sbjct: 178 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 310 VVLLEILT 317
V+L EI +
Sbjct: 238 VLLWEIFS 245
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 92/225 (40%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYIT 117
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K++DFG + P + + GT
Sbjct: 118 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLCGT 171
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 172 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 221
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 222 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 105/246 (42%), Gaps = 24/246 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VAVK+ D + E+ L+H N+VK G+ E + L E+ + G + +
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFG 265
+ + +P P + R A G+ +LH + +RD K N+LLD N K+SDFG
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMA--GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFG 149
Query: 266 LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTG--HLTPRSDVYSFGVVLLEILTGRKSLD 323
LA ++ + ++ GT Y APE + H P DV+S G+VL +L G D
Sbjct: 150 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWD 208
Query: 324 KSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYH-CLNHNPKAR 382
+ + Q +DW P K + A + H L NP AR
Sbjct: 209 QPSDSC-QEYSDWKEKKTYLN---------------PWKKIDSAPLALLHKILVENPSAR 252
Query: 383 PLMRDI 388
+ DI
Sbjct: 253 ITIPDI 258
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 105/246 (42%), Gaps = 24/246 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VAVK+ D + E+ L+H N+VK G+ E + L E+ + G + +
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFG 265
+ + +P P + R A G+ +LH + +RD K N+LLD N K+SDFG
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMA--GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFG 149
Query: 266 LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTG--HLTPRSDVYSFGVVLLEILTGRKSLD 323
LA ++ + ++ GT Y APE + H P DV+S G+VL +L G D
Sbjct: 150 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWD 208
Query: 324 KSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYH-CLNHNPKAR 382
+ + Q +DW P K + A + H L NP AR
Sbjct: 209 QPSDSC-QEYSDWKEKKTYLN---------------PWKKIDSAPLALLHKILVENPSAR 252
Query: 383 PLMRDI 388
+ DI
Sbjct: 253 ITIPDI 258
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 105/246 (42%), Gaps = 24/246 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VAVK+ D + E+ L+H N+VK G+ E + L E+ + G + +
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFG 265
+ + +P P + R A G+ +LH + +RD K N+LLD N K+SDFG
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMA--GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFG 149
Query: 266 LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTG--HLTPRSDVYSFGVVLLEILTGRKSLD 323
LA ++ + ++ GT Y APE + H P DV+S G+VL +L G D
Sbjct: 150 LATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWD 208
Query: 324 KSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYH-CLNHNPKAR 382
+ + Q +DW P K + A + H L NP AR
Sbjct: 209 QPSDSC-QEYSDWKEKKTYLN---------------PWKKIDSAPLALLHKILVENPSAR 252
Query: 383 PLMRDI 388
+ DI
Sbjct: 253 ITIPDI 258
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 105/246 (42%), Gaps = 24/246 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VAVK+ D + E+ L+H N+VK G+ E + L E+ + G + +
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFG 265
+ + +P P + R A G+ +LH + +RD K N+LLD N K+SDFG
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMA--GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFG 150
Query: 266 LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTG--HLTPRSDVYSFGVVLLEILTGRKSLD 323
LA ++ + ++ GT Y APE + H P DV+S G+VL +L G D
Sbjct: 151 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWD 209
Query: 324 KSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYH-CLNHNPKAR 382
+ + Q +DW P K + A + H L NP AR
Sbjct: 210 QPSDSC-QEYSDWKEKKTYLN---------------PWKKIDSAPLALLHKILVENPSAR 253
Query: 383 PLMRDI 388
+ DI
Sbjct: 254 ITIPDI 259
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 5/102 (4%)
Query: 221 MKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVST 280
+ IA A+G+ +LH K +I+RD K++NI L D K+ DFGLA SH
Sbjct: 107 IDIARQTAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 164
Query: 281 RIMGTYGYAAPEYIMTGHLTP---RSDVYSFGVVLLEILTGR 319
++ G+ + APE I P +SDVY+FG+VL E++TG+
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 105/246 (42%), Gaps = 24/246 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VAVK+ D + E+ L+H N+VK G+ E + L E+ + G + +
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFG 265
+ + +P P + R A G+ +LH + +RD K N+LLD N K+SDFG
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMA--GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFG 149
Query: 266 LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTG--HLTPRSDVYSFGVVLLEILTGRKSLD 323
LA ++ + ++ GT Y APE + H P DV+S G+VL +L G D
Sbjct: 150 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWD 208
Query: 324 KSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYH-CLNHNPKAR 382
+ + Q +DW P K + A + H L NP AR
Sbjct: 209 QPSDSC-QEYSDWKEKKTYLN---------------PWKKIDSAPLALLHKILVENPSAR 252
Query: 383 PLMRDI 388
+ DI
Sbjct: 253 ITIPDI 258
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 90/198 (45%), Gaps = 11/198 (5%)
Query: 128 VYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCE 187
VY+G +S + P+ VAVK S Q ++L E + + +H N+V+ IG +
Sbjct: 46 VYEGQVS-GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 104
Query: 188 DEHRVLIYEFMARGSVENNLFSKVLLP-LPWSIRM----KIAFGAAKGLAFLHEAEKPVI 242
R ++ E MA G +++ L P P S+ M +A A G +L E I
Sbjct: 105 SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FI 162
Query: 243 YRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHL 299
+RD N LL AK+ DFG+A+D M + PE M G
Sbjct: 163 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 222
Query: 300 TPRSDVYSFGVVLLEILT 317
T ++D +SFGV+L EI +
Sbjct: 223 TSKTDTWSFGVLLWEIFS 240
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 90/198 (45%), Gaps = 11/198 (5%)
Query: 128 VYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCE 187
VY+G +S + P+ VAVK S Q ++L E + + +H N+V+ IG +
Sbjct: 46 VYEGQVS-GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 104
Query: 188 DEHRVLIYEFMARGSVENNLFSKVLLP-LPWSIRM----KIAFGAAKGLAFLHEAEKPVI 242
R ++ E MA G +++ L P P S+ M +A A G +L E I
Sbjct: 105 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FI 162
Query: 243 YRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHL 299
+RD N LL AK+ DFG+A+D M + PE M G
Sbjct: 163 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 222
Query: 300 TPRSDVYSFGVVLLEILT 317
T ++D +SFGV+L EI +
Sbjct: 223 TSKTDTWSFGVLLWEIFS 240
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 105/246 (42%), Gaps = 24/246 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VAVK+ D + E+ L+H N+VK G+ E + L E+ + G + +
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFG 265
+ + +P P + R A G+ +LH + +RD K N+LLD N K+SDFG
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMA--GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFG 149
Query: 266 LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTG--HLTPRSDVYSFGVVLLEILTGRKSLD 323
LA ++ + ++ GT Y APE + H P DV+S G+VL +L G D
Sbjct: 150 LATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWD 208
Query: 324 KSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYH-CLNHNPKAR 382
+ + Q +DW P K + A + H L NP AR
Sbjct: 209 QPSDSC-QEYSDWKEKKTYLN---------------PWKKIDSAPLALLHKILVENPSAR 252
Query: 383 PLMRDI 388
+ DI
Sbjct: 253 ITIPDI 258
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 89/187 (47%), Gaps = 15/187 (8%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMARGS 202
+ VAVK+ ++E+ + HL H N+V L+G C ++I E+ G
Sbjct: 77 LKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 203 VENNLF--SKVLLPLP--------WSIRMKIAFGA--AKGLAFLHEAEKPVIYRDFKTSN 250
+ N L S+VL P S R + F + A+G+AFL A K I+RD N
Sbjct: 137 LLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARN 194
Query: 251 ILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGV 310
+LL + AK+ DFGLA+D V + APE I T +SDV+S+G+
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254
Query: 311 VLLEILT 317
+L EI +
Sbjct: 255 LLWEIFS 261
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 105/246 (42%), Gaps = 24/246 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VAVK+ D + E+ L+H N+VK G+ E + L E+ + G + +
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFG 265
+ + +P P + R A G+ +LH + +RD K N+LLD N K+SDFG
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMA--GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFG 150
Query: 266 LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTG--HLTPRSDVYSFGVVLLEILTGRKSLD 323
LA ++ + ++ GT Y APE + H P DV+S G+VL +L G D
Sbjct: 151 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWD 209
Query: 324 KSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYH-CLNHNPKAR 382
+ + Q +DW P K + A + H L NP AR
Sbjct: 210 QPSDSC-QEYSDWKEKKTYLN---------------PWKKIDSAPLALLHKILVENPSAR 253
Query: 383 PLMRDI 388
+ DI
Sbjct: 254 ITIPDI 259
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 90/198 (45%), Gaps = 11/198 (5%)
Query: 128 VYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCE 187
VY+G +S + P+ VAVK S Q ++L E + + +H N+V+ IG +
Sbjct: 73 VYEGQVS-GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 131
Query: 188 DEHRVLIYEFMARGSVENNLFSKVLLP-LPWSIRM----KIAFGAAKGLAFLHEAEKPVI 242
R ++ E MA G +++ L P P S+ M +A A G +L E I
Sbjct: 132 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FI 189
Query: 243 YRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHL 299
+RD N LL AK+ DFG+A+D M + PE M G
Sbjct: 190 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 249
Query: 300 TPRSDVYSFGVVLLEILT 317
T ++D +SFGV+L EI +
Sbjct: 250 TSKTDTWSFGVLLWEIFS 267
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 90/198 (45%), Gaps = 11/198 (5%)
Query: 128 VYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCE 187
VY+G +S + P+ VAVK S Q ++L E + + +H N+V+ IG +
Sbjct: 63 VYEGQVS-GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 121
Query: 188 DEHRVLIYEFMARGSVENNLFSKVLLP-LPWSIRM----KIAFGAAKGLAFLHEAEKPVI 242
R ++ E MA G +++ L P P S+ M +A A G +L E I
Sbjct: 122 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FI 179
Query: 243 YRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHL 299
+RD N LL AK+ DFG+A+D M + PE M G
Sbjct: 180 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 239
Query: 300 TPRSDVYSFGVVLLEILT 317
T ++D +SFGV+L EI +
Sbjct: 240 TSKTDTWSFGVLLWEIFS 257
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYIT 118
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K+++FG + P + T + GT
Sbjct: 119 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGT 172
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 222
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 223 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 105/246 (42%), Gaps = 24/246 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VAVK+ D + E+ L+H N+VK G+ E + L E+ + G + +
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFG 265
+ + +P P + R A G+ +LH + +RD K N+LLD N K+SDFG
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMA--GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFG 150
Query: 266 LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTG--HLTPRSDVYSFGVVLLEILTGRKSLD 323
LA ++ + ++ GT Y APE + H P DV+S G+VL +L G D
Sbjct: 151 LATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWD 209
Query: 324 KSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYH-CLNHNPKAR 382
+ + Q +DW P K + A + H L NP AR
Sbjct: 210 QPSDSC-QEYSDWKEKKTYLN---------------PWKKIDSAPLALLHKILVENPSAR 253
Query: 383 PLMRDI 388
+ DI
Sbjct: 254 ITIPDI 259
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 105/246 (42%), Gaps = 24/246 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VAVK+ D + E+ L+H N+VK G+ E + L E+ + G + +
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFG 265
+ + +P P + R A G+ +LH + +RD K N+LLD N K+SDFG
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMA--GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFG 149
Query: 266 LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTG--HLTPRSDVYSFGVVLLEILTGRKSLD 323
LA ++ + ++ GT Y APE + H P DV+S G+VL +L G D
Sbjct: 150 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWD 208
Query: 324 KSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYH-CLNHNPKAR 382
+ + Q +DW P K + A + H L NP AR
Sbjct: 209 QPSDSC-QEYSDWKEKKTYLN---------------PWKKIDSAPLALLHKILVENPSAR 252
Query: 383 PLMRDI 388
+ DI
Sbjct: 253 ITIPDI 258
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYIT 115
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K++DFG + P ++ + GT
Sbjct: 116 ELANALSYCHS--KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA----ALCGT 169
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G+ P E N
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK-------PPFEANTYQDTYKRIS--- 219
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 220 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 90/198 (45%), Gaps = 11/198 (5%)
Query: 128 VYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCE 187
VY+G +S + P+ VAVK S Q ++L E + + +H N+V+ IG +
Sbjct: 47 VYEGQVS-GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 105
Query: 188 DEHRVLIYEFMARGSVENNLFSKVLLP-LPWSIRM----KIAFGAAKGLAFLHEAEKPVI 242
R ++ E MA G +++ L P P S+ M +A A G +L E I
Sbjct: 106 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FI 163
Query: 243 YRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHL 299
+RD N LL AK+ DFG+A+D M + PE M G
Sbjct: 164 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 223
Query: 300 TPRSDVYSFGVVLLEILT 317
T ++D +SFGV+L EI +
Sbjct: 224 TSKTDTWSFGVLLWEIFS 241
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 92/225 (40%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYIT 116
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K++DFG + P + + GT
Sbjct: 117 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD----TLCGT 170
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 220
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 221 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 105/246 (42%), Gaps = 24/246 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VAVK+ D + E+ L+H N+VK G+ E + L E+ + G + +
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFG 265
+ + +P P + R A G+ +LH + +RD K N+LLD N K+SDFG
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMA--GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFG 149
Query: 266 LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTG--HLTPRSDVYSFGVVLLEILTGRKSLD 323
LA ++ + ++ GT Y APE + H P DV+S G+VL +L G D
Sbjct: 150 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWD 208
Query: 324 KSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYH-CLNHNPKAR 382
+ + Q +DW P K + A + H L NP AR
Sbjct: 209 QPSDSC-QEYSDWKEKKTYLN---------------PWKKIDSAPLALLHKILVENPSAR 252
Query: 383 PLMRDI 388
+ DI
Sbjct: 253 ITIPDI 258
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 105/246 (42%), Gaps = 24/246 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VAVK+ D + E+ L+H N+VK G+ E + L E+ + G + +
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFG 265
+ + +P P + R A G+ +LH + +RD K N+LLD N K+SDFG
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMA--GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFG 149
Query: 266 LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTG--HLTPRSDVYSFGVVLLEILTGRKSLD 323
LA ++ + ++ GT Y APE + H P DV+S G+VL +L G D
Sbjct: 150 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWD 208
Query: 324 KSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYH-CLNHNPKAR 382
+ + Q +DW P K + A + H L NP AR
Sbjct: 209 QPSDSC-QEYSDWKEKKTYLN---------------PWKKIDSAPLALLHKILVENPSAR 252
Query: 383 PLMRDI 388
+ DI
Sbjct: 253 ITIPDI 258
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYIT 118
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K++DFG + P ++ + GT
Sbjct: 119 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA----ALCGT 172
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 222
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 223 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 105/246 (42%), Gaps = 24/246 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VAVK+ D + E+ L+H N+VK G+ E + L E+ + G + +
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFG 265
+ + +P P + R A G+ +LH + +RD K N+LLD N K+SDFG
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMA--GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFG 149
Query: 266 LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTG--HLTPRSDVYSFGVVLLEILTGRKSLD 323
LA ++ + ++ GT Y APE + H P DV+S G+VL +L G D
Sbjct: 150 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWD 208
Query: 324 KSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYH-CLNHNPKAR 382
+ + Q +DW P K + A + H L NP AR
Sbjct: 209 QPSDSC-QEYSDWKEKKTYLN---------------PWKKIDSAPLALLHKILVENPSAR 252
Query: 383 PLMRDI 388
+ DI
Sbjct: 253 ITIPDI 258
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 89/188 (47%), Gaps = 18/188 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHP-NLVKLIGYCCEDEHRVL-IYEFMARGSV 203
VAVK+ ++ HR ++E+ L H+ H N+V L+G C + ++ I EF G++
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 110
Query: 204 ENNLFSKVLLPLPWSIR--------------MKIAFGAAKGLAFLHEAEKPVIYRDFKTS 249
L SK +P+ + + +F AKG+ FL A + I+RD
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAAR 168
Query: 250 NILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFG 309
NILL K+ DFGLA+D + + APE I T +SDV+SFG
Sbjct: 169 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 228
Query: 310 VVLLEILT 317
V+L EI +
Sbjct: 229 VLLWEIFS 236
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 105/246 (42%), Gaps = 24/246 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VAVK+ D + E+ L+H N+VK G+ E + L E+ + G + +
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFG 265
+ + +P P + R A G+ +LH + +RD K N+LLD N K+SDFG
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMA--GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFG 149
Query: 266 LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTG--HLTPRSDVYSFGVVLLEILTGRKSLD 323
LA ++ + ++ GT Y APE + H P DV+S G+VL +L G D
Sbjct: 150 LATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWD 208
Query: 324 KSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYH-CLNHNPKAR 382
+ + Q +DW P K + A + H L NP AR
Sbjct: 209 QPSDSC-QEYSDWKEKKTYLN---------------PWKKIDSAPLALLHKILVENPSAR 252
Query: 383 PLMRDI 388
+ DI
Sbjct: 253 ITIPDI 258
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 105/246 (42%), Gaps = 24/246 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VAVK+ D + E+ L+H N+VK G+ E + L E+ + G + +
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFG 265
+ + +P P + R A G+ +LH + +RD K N+LLD N K+SDFG
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFG 150
Query: 266 LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTG--HLTPRSDVYSFGVVLLEILTGRKSLD 323
LA ++ + ++ GT Y APE + H P DV+S G+VL +L G D
Sbjct: 151 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWD 209
Query: 324 KSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYH-CLNHNPKAR 382
+ + Q +DW P K + A + H L NP AR
Sbjct: 210 QPSDSC-QEYSDWKEKKTYLN---------------PWKKIDSAPLALLHKILVENPSAR 253
Query: 383 PLMRDI 388
+ DI
Sbjct: 254 ITIPDI 259
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 105/246 (42%), Gaps = 24/246 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VAVK+ D + E+ L+H N+VK G+ E + L E+ + G + +
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFG 265
+ + +P P + R A G+ +LH + +RD K N+LLD N K+SDFG
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFG 150
Query: 266 LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTG--HLTPRSDVYSFGVVLLEILTGRKSLD 323
LA ++ + ++ GT Y APE + H P DV+S G+VL +L G D
Sbjct: 151 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWD 209
Query: 324 KSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYH-CLNHNPKAR 382
+ + Q +DW P K + A + H L NP AR
Sbjct: 210 QPSDSC-QEYSDWKEKKTYLN---------------PWKKIDSAPLALLHKILVENPSAR 253
Query: 383 PLMRDI 388
+ DI
Sbjct: 254 ITIPDI 259
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 105/246 (42%), Gaps = 24/246 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VAVK+ D + E+ L+H N+VK G+ E + L E+ + G + +
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFG 265
+ + +P P + R A G+ +LH + +RD K N+LLD N K+SDFG
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFG 150
Query: 266 LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTG--HLTPRSDVYSFGVVLLEILTGRKSLD 323
LA ++ + ++ GT Y APE + H P DV+S G+VL +L G D
Sbjct: 151 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWD 209
Query: 324 KSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYH-CLNHNPKAR 382
+ + Q +DW P K + A + H L NP AR
Sbjct: 210 QPSDSC-QEYSDWKEKKTYLN---------------PWKKIDSAPLALLHKILVENPSAR 253
Query: 383 PLMRDI 388
+ DI
Sbjct: 254 ITIPDI 259
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 105/246 (42%), Gaps = 24/246 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VAVK+ D + E+ L+H N+VK G+ E + L E+ + G + +
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFG 265
+ + +P P + R A G+ +LH + +RD K N+LLD N K+SDFG
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFG 150
Query: 266 LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTG--HLTPRSDVYSFGVVLLEILTGRKSLD 323
LA ++ + ++ GT Y APE + H P DV+S G+VL +L G D
Sbjct: 151 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWD 209
Query: 324 KSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYH-CLNHNPKAR 382
+ + Q +DW P K + A + H L NP AR
Sbjct: 210 QPSDSC-QEYSDWKEKKTYLN---------------PWKKIDSAPLALLHKILVENPSAR 253
Query: 383 PLMRDI 388
+ DI
Sbjct: 254 ITIPDI 259
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 105/246 (42%), Gaps = 24/246 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VAVK+ D + E+ L+H N+VK G+ E + L E+ + G + +
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFG 265
+ + +P P + R A G+ +LH + +RD K N+LLD N K+SDFG
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFG 149
Query: 266 LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTG--HLTPRSDVYSFGVVLLEILTGRKSLD 323
LA ++ + ++ GT Y APE + H P DV+S G+VL +L G D
Sbjct: 150 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWD 208
Query: 324 KSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYH-CLNHNPKAR 382
+ + Q +DW P K + A + H L NP AR
Sbjct: 209 QPSDSC-QEYSDWKEKKTYLN---------------PWKKIDSAPLALLHKILVENPSAR 252
Query: 383 PLMRDI 388
+ DI
Sbjct: 253 ITIPDI 258
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYIT 115
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K++DFG + P ++ + GT
Sbjct: 116 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA----ALCGT 169
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 219
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 220 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 119/234 (50%), Gaps = 25/234 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+K S + ++E L
Sbjct: 6 LRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEIL 62
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 63 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN--W 119
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ A+G+ +L + + +++RD N+L+ T + K++DFGLAK +K +
Sbjct: 120 CVQI------AEGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 171
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + A E I+ T +SDV+S+GV + E++T G K D PA E
Sbjct: 172 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 224
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 89/188 (47%), Gaps = 18/188 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHP-NLVKLIGYCCEDEHRVL-IYEFMARGSV 203
VAVK+ ++ HR ++E+ L H+ H N+V L+G C + ++ I EF G++
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 204 ENNLFSKVLLPLPWSIR--------------MKIAFGAAKGLAFLHEAEKPVIYRDFKTS 249
L SK +P+ + + +F AKG+ FL A + I+RD
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAAR 168
Query: 250 NILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFG 309
NILL K+ DFGLA+D + + APE I T +SDV+SFG
Sbjct: 169 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 228
Query: 310 VVLLEILT 317
V+L EI +
Sbjct: 229 VLLWEIFS 236
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 117/239 (48%), Gaps = 35/239 (14%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLA 165
LRI+ R+ +VL VYKG D E ++ +PVA+KV + S + ++E L
Sbjct: 11 LRILKETELRKVKVLGSGAFGTVYKGIWIPD-GENVK-IPVAIKVLRENTSPKANKEILD 68
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPWS 218
E + + P + +L+G C + L+ + M G + L S+ LL W
Sbjct: 69 EAYVMAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLN--WC 125
Query: 219 IRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAK----DGPE-- 272
+++ AKG+++L + +++RD N+L+ + + K++DFGLA+ D E
Sbjct: 126 MQI------AKGMSYLEDVR--LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYH 177
Query: 273 GDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
D V + M A E I+ T +SDV+S+GV + E++T G K D PARE
Sbjct: 178 ADGGKVPIKWM------ALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD-GIPARE 229
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 89/187 (47%), Gaps = 15/187 (8%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMARGS 202
+ VAVK+ ++E+ + HL H N+V L+G C ++I E+ G
Sbjct: 77 LKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 203 VENNLF--SKVLLPLPW--------SIRMKIAFGA--AKGLAFLHEAEKPVIYRDFKTSN 250
+ N L S+VL P S R + F + A+G+AFL A K I+RD N
Sbjct: 137 LLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARN 194
Query: 251 ILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGV 310
+LL + AK+ DFGLA+D V + APE I T +SDV+S+G+
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254
Query: 311 VLLEILT 317
+L EI +
Sbjct: 255 LLWEIFS 261
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 90/198 (45%), Gaps = 11/198 (5%)
Query: 128 VYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCE 187
VY+G +S + P+ VAVK S Q ++L E + + +H N+V+ IG +
Sbjct: 53 VYEGQVS-GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 111
Query: 188 DEHRVLIYEFMARGSVENNLFSKVLLP-LPWSIRM----KIAFGAAKGLAFLHEAEKPVI 242
R ++ E MA G +++ L P P S+ M +A A G +L E I
Sbjct: 112 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FI 169
Query: 243 YRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHL 299
+RD N LL AK+ DFG+A+D M + PE M G
Sbjct: 170 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 229
Query: 300 TPRSDVYSFGVVLLEILT 317
T ++D +SFGV+L EI +
Sbjct: 230 TSKTDTWSFGVLLWEIFS 247
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 90/198 (45%), Gaps = 11/198 (5%)
Query: 128 VYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCE 187
VY+G +S + P+ VAVK S Q ++L E + + +H N+V+ IG +
Sbjct: 38 VYEGQVS-GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 96
Query: 188 DEHRVLIYEFMARGSVENNLFSKVLLP-LPWSIRM----KIAFGAAKGLAFLHEAEKPVI 242
R ++ E MA G +++ L P P S+ M +A A G +L E I
Sbjct: 97 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FI 154
Query: 243 YRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHL 299
+RD N LL AK+ DFG+A+D M + PE M G
Sbjct: 155 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 214
Query: 300 TPRSDVYSFGVVLLEILT 317
T ++D +SFGV+L EI +
Sbjct: 215 TSKTDTWSFGVLLWEIFS 232
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 90/198 (45%), Gaps = 11/198 (5%)
Query: 128 VYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCE 187
VY+G +S + P+ VAVK S Q ++L E + + +H N+V+ IG +
Sbjct: 47 VYEGQVS-GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 105
Query: 188 DEHRVLIYEFMARGSVENNLFSKVLLP-LPWSIRM----KIAFGAAKGLAFLHEAEKPVI 242
R ++ E MA G +++ L P P S+ M +A A G +L E I
Sbjct: 106 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FI 163
Query: 243 YRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHL 299
+RD N LL AK+ DFG+A+D M + PE M G
Sbjct: 164 HRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 223
Query: 300 TPRSDVYSFGVVLLEILT 317
T ++D +SFGV+L EI +
Sbjct: 224 TSKTDTWSFGVLLWEIFS 241
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 90/198 (45%), Gaps = 11/198 (5%)
Query: 128 VYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCE 187
VY+G +S + P+ VAVK S Q ++L E + + +H N+V+ IG +
Sbjct: 61 VYEGQVS-GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 119
Query: 188 DEHRVLIYEFMARGSVENNLFSKVLLP-LPWSIRM----KIAFGAAKGLAFLHEAEKPVI 242
R ++ E MA G +++ L P P S+ M +A A G +L E I
Sbjct: 120 SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FI 177
Query: 243 YRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHL 299
+RD N LL AK+ DFG+A+D M + PE M G
Sbjct: 178 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 237
Query: 300 TPRSDVYSFGVVLLEILT 317
T ++D +SFGV+L EI +
Sbjct: 238 TSKTDTWSFGVLLWEIFS 255
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 89/188 (47%), Gaps = 18/188 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHP-NLVKLIGYCCEDEHRVL-IYEFMARGSV 203
VAVK+ ++ HR ++E+ L H+ H N+V L+G C + ++ I EF G++
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 204 ENNLFSKVLLPLPWSIR--------------MKIAFGAAKGLAFLHEAEKPVIYRDFKTS 249
L SK +P+ + + +F AKG+ FL A + I+RD
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAAR 177
Query: 250 NILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFG 309
NILL K+ DFGLA+D + + APE I T +SDV+SFG
Sbjct: 178 NILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 310 VVLLEILT 317
V+L EI +
Sbjct: 238 VLLWEIFS 245
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 90/198 (45%), Gaps = 11/198 (5%)
Query: 128 VYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCE 187
VY+G +S + P+ VAVK S Q ++L E + + +H N+V+ IG +
Sbjct: 64 VYEGQVS-GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 122
Query: 188 DEHRVLIYEFMARGSVENNLFSKVLLP-LPWSIRM----KIAFGAAKGLAFLHEAEKPVI 242
R ++ E MA G +++ L P P S+ M +A A G +L E I
Sbjct: 123 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FI 180
Query: 243 YRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHL 299
+RD N LL AK+ DFG+A+D M + PE M G
Sbjct: 181 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIF 240
Query: 300 TPRSDVYSFGVVLLEILT 317
T ++D +SFGV+L EI +
Sbjct: 241 TSKTDTWSFGVLLWEIFS 258
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 92/225 (40%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYIT 118
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K++DFG + P + + GT
Sbjct: 119 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLCGT 172
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 222
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 223 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHR--VLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
E+ L +L H N+VK G C ED LI EF+ GS++ L K + ++K
Sbjct: 73 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKY 131
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVST--- 280
A KG+ +L + ++RD N+L+++++ K+ DFGL K E DK +
Sbjct: 132 AVQICKGMDYL--GSRQYVHRDLAARNVLVESEHQVKIGDFGLTK-AIETDKEXXTVKDD 188
Query: 281 RIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
R + Y APE +M SDV+SFGV L E+LT
Sbjct: 189 RDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 90/198 (45%), Gaps = 11/198 (5%)
Query: 128 VYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCE 187
VY+G +S + P+ VAVK S Q ++L E + + +H N+V+ IG +
Sbjct: 87 VYEGQVS-GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 145
Query: 188 DEHRVLIYEFMARGSVENNLFSKVLLP-LPWSIRM----KIAFGAAKGLAFLHEAEKPVI 242
R ++ E MA G +++ L P P S+ M +A A G +L E I
Sbjct: 146 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FI 203
Query: 243 YRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHL 299
+RD N LL AK+ DFG+A+D M + PE M G
Sbjct: 204 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIF 263
Query: 300 TPRSDVYSFGVVLLEILT 317
T ++D +SFGV+L EI +
Sbjct: 264 TSKTDTWSFGVLLWEIFS 281
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 84/150 (56%), Gaps = 8/150 (5%)
Query: 170 LGHLSHPNLVKLIGYCCEDEHRV-LIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAA 228
L ++HP +VKL Y + E ++ LI +F+ G + L SK ++ ++ +A A
Sbjct: 84 LADVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLA-ELA 140
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGY 288
GL LH +IYRD K NILLD + + KL+DFGL+K+ + +K S GT Y
Sbjct: 141 LGLDHLHSL--GIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGTVEY 196
Query: 289 AAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
APE + + +D +S+GV++ E+LTG
Sbjct: 197 MAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 88/187 (47%), Gaps = 17/187 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHP-NLVKLIGYCCEDEHRVL-IYEFMARGSV 203
VAVK+ ++ HR ++E+ L H+ H N+V L+G C + ++ I EF G++
Sbjct: 61 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 120
Query: 204 ENNLFSKVLLPLPWSIRMKI-------------AFGAAKGLAFLHEAEKPVIYRDFKTSN 250
L SK +P+ + +F AKG+ FL A + I+RD N
Sbjct: 121 STYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAARN 178
Query: 251 ILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGV 310
ILL K+ DFGLA+D + + APE I T +SDV+SFGV
Sbjct: 179 ILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 311 VLLEILT 317
+L EI +
Sbjct: 239 LLWEIFS 245
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHR--VLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
E+ L +L H N+VK G C ED LI EF+ GS++ L K + ++K
Sbjct: 61 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKY 119
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVST--- 280
A KG+ +L + ++RD N+L+++++ K+ DFGL K E DK +
Sbjct: 120 AVQICKGMDYL--GSRQYVHRDLAARNVLVESEHQVKIGDFGLTK-AIETDKEXXTVKDD 176
Query: 281 RIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
R + Y APE +M SDV+SFGV L E+LT
Sbjct: 177 RDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 90/198 (45%), Gaps = 11/198 (5%)
Query: 128 VYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCE 187
VY+G +S + P+ VAVK S Q ++L E + + +H N+V+ IG +
Sbjct: 61 VYEGQVS-GMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 119
Query: 188 DEHRVLIYEFMARGSVENNLFSKVLLP-LPWSIRM----KIAFGAAKGLAFLHEAEKPVI 242
R ++ E MA G +++ L P P S+ M +A A G +L E I
Sbjct: 120 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FI 177
Query: 243 YRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHL 299
+RD N LL AK+ DFG+A+D M + PE M G
Sbjct: 178 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 237
Query: 300 TPRSDVYSFGVVLLEILT 317
T ++D +SFGV+L EI +
Sbjct: 238 TSKTDTWSFGVLLWEIFS 255
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 15/156 (9%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
E + L ++HP ++++ G + + +I +++ G + + L P P + F
Sbjct: 56 ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVA-----KF 110
Query: 226 GAAK---GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
AA+ L +LH K +IYRD K NILLD + + K++DFG AK P+ V+ +
Sbjct: 111 YAAEVCLALEYLHS--KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXL 163
Query: 283 MGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
GT Y APE + T D +SFG+++ E+L G
Sbjct: 164 CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 88/186 (47%), Gaps = 16/186 (8%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHP-NLVKLIGYCCEDEHRVL-IYEFMARGSV 203
VAVK+ ++ HR ++E+ L H+ H N+V L+G C + ++ I EF G++
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 204 ENNLFSKVLLPLPWSIR------------MKIAFGAAKGLAFLHEAEKPVIYRDFKTSNI 251
L SK +P+ + +F AKG+ FL A + I+RD NI
Sbjct: 122 STYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL--ASRKXIHRDLAARNI 179
Query: 252 LLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVV 311
LL K+ DFGLA+D + + APE I T +SDV+SFGV+
Sbjct: 180 LLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 239
Query: 312 LLEILT 317
L EI +
Sbjct: 240 LWEIFS 245
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 118/234 (50%), Gaps = 25/234 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+K S + ++E L
Sbjct: 13 LRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEIL 69
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 70 DEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLN--W 126
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ AKG+ +L + + +++RD N+L+ T + K++DFG AK +K +
Sbjct: 127 CVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 178
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + A E I+ T +SDV+S+GV + E++T G K D PA E
Sbjct: 179 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 231
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 86/182 (47%), Gaps = 22/182 (12%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHR---VLIYEFMARGS 202
VAVK Q W E+ L L H ++VK G CCED+ L+ E++ GS
Sbjct: 41 VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKG-CCEDQGEKSVQLVMEYVPLGS 99
Query: 203 VENNL------FSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTD 256
+ + L +++LL A +G+A+LH + I+R N+LLD D
Sbjct: 100 LRDYLPRHCVGLAQLLL---------FAQQICEGMAYLHA--QHYIHRALAARNVLLDND 148
Query: 257 YNAKLSDFGLAKDGPEGDKSH-VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEI 315
K+ DFGLAK PEG + + V + APE + SDV+SFGV L E+
Sbjct: 149 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYEL 208
Query: 316 LT 317
LT
Sbjct: 209 LT 210
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 92/225 (40%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYIT 115
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K++DFG + P + + GT
Sbjct: 116 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLCGT 169
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 219
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 220 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 117/272 (43%), Gaps = 33/272 (12%)
Query: 142 QPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMAR 200
+ V VAVK+ D + + + ++E+ + + H N++ L+G C +D +I + ++
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASK 125
Query: 201 GSVENNLFSKVLLPLPWSIRMK--------------IAFGAAKGLAFLHEAEKPVIYRDF 246
G++ L ++ + +S + + A+G+ +L A + I+RD
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDL 183
Query: 247 KTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVY 306
N+L+ + K++DFGLA+D D +T + APE + T +SDV+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 307 SFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHK 366
SFGV++ EI T S P E ++ D P ++
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEE----------------LFKLLKEGHRMDKPANCTNE 287
Query: 367 AAMLAYHCLNHNPKARPLMRDIVDSLEPLQVL 398
M+ C + P RP + +V+ L+ + L
Sbjct: 288 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 118/234 (50%), Gaps = 25/234 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+K S + ++E L
Sbjct: 11 LRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEIL 67
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLN--W 124
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ AKG+ +L + + +++RD N+L+ T + K++DFG AK +K +
Sbjct: 125 CVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 176
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + A E I+ T +SDV+S+GV + E++T G K D PA E
Sbjct: 177 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 229
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
+ E+ L L+HPN+VKL+ + L++EF+ + ++ + + L +P +
Sbjct: 54 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 112
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
F +GLAF H V++RD K N+L++T+ KL+DFGLA+ G T +
Sbjct: 113 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEV 168
Query: 284 GTYGYAAPEYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
T Y APE ++ + + D++S G + E++T R
Sbjct: 169 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 89/188 (47%), Gaps = 18/188 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHP-NLVKLIGYCCEDEHRVL-IYEFMARGSV 203
VAVK+ ++ HR ++E+ L H+ H N+V L+G C + ++ I EF G++
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 204 ENNLFSKVLLPLPWSIR--------------MKIAFGAAKGLAFLHEAEKPVIYRDFKTS 249
L SK +P+ + + +F AKG+ FL A + I+RD
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAAR 177
Query: 250 NILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFG 309
NILL K+ DFGLA+D + + APE I T +SDV+SFG
Sbjct: 178 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 310 VVLLEILT 317
V+L EI +
Sbjct: 238 VLLWEIFS 245
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 92/225 (40%), Gaps = 26/225 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYIT 118
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL + K++DFG + P + + GT
Sbjct: 119 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD----LCGT 172
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXX 345
Y PE I + D++S GV+ E L G +P E N
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--- 222
Query: 346 XXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVD 390
R+E +P A L L HNP RP++R++++
Sbjct: 223 --------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 24/227 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+ S + ++E L
Sbjct: 43 LRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIMELREATSPKANKEIL 99
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 100 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN--W 156
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ AKG+ +L + + +++RD N+L+ T + K++DFGLAK +K +
Sbjct: 157 CVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 208
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLD 323
+ + A E I+ T +SDV+S+GV + E++T G K D
Sbjct: 209 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 88/184 (47%), Gaps = 14/184 (7%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHP-NLVKLIGYCCEDEHRVL-IYEFMARGSV 203
VAVK+ ++ HR ++E+ L H+ H N+V L+G C + ++ I EF G++
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 204 ENNLFSKVLLPLPWSIRMK----------IAFGAAKGLAFLHEAEKPVIYRDFKTSNILL 253
L SK +P+ K +F AKG+ FL A + I+RD NILL
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKXIHRDLAARNILL 177
Query: 254 DTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLL 313
K+ DFGLA+D + + APE I T +SDV+SFGV+L
Sbjct: 178 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 237
Query: 314 EILT 317
EI +
Sbjct: 238 EIFS 241
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 118/234 (50%), Gaps = 25/234 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+K S + ++E L
Sbjct: 11 LRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEIL 67
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLN--W 124
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ AKG+ +L + + +++RD N+L+ T + K++DFG AK +K +
Sbjct: 125 CVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 176
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + A E I+ T +SDV+S+GV + E++T G K D PA E
Sbjct: 177 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 229
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 86/182 (47%), Gaps = 22/182 (12%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHR---VLIYEFMARGS 202
VAVK Q W E+ L L H ++VK G CCED+ L+ E++ GS
Sbjct: 40 VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKG-CCEDQGEKSVQLVMEYVPLGS 98
Query: 203 VENNL------FSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTD 256
+ + L +++LL A +G+A+LH + I+R N+LLD D
Sbjct: 99 LRDYLPRHCVGLAQLLL---------FAQQICEGMAYLHA--QHYIHRALAARNVLLDND 147
Query: 257 YNAKLSDFGLAKDGPEGDKSH-VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEI 315
K+ DFGLAK PEG + + V + APE + SDV+SFGV L E+
Sbjct: 148 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYEL 207
Query: 316 LT 317
LT
Sbjct: 208 LT 209
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 13/209 (6%)
Query: 113 NFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQG-HREWLAEVIFLG 171
NF++ + VYK R L VA+K D +G + E+ L
Sbjct: 3 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 56
Query: 172 HLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGL 231
L+HPN+VKL+ + L++EF+ + ++ + + L +P + F +GL
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAP 291
AF H V++RD K N+L++T+ KL+DFGLA+ G T + T Y AP
Sbjct: 116 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAP 171
Query: 292 EYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
E ++ + + D++S G + E++T R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 118/234 (50%), Gaps = 25/234 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+K S + ++E L
Sbjct: 9 LRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEIL 65
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN--W 122
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ AKG+ +L + + +++RD N+L+ T + K++DFG AK +K +
Sbjct: 123 CVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 174
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + A E I+ T +SDV+S+GV + E++T G K D PA E
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 227
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 13/209 (6%)
Query: 113 NFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQG-HREWLAEVIFLG 171
NF++ + VYK R L VA+K D +G + E+ L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 172 HLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGL 231
L+HPN+VKL+ + L++EF+ + ++ + + L +P + F +GL
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAP 291
AF H V++RD K N+L++T+ KL+DFGLA+ G T + T Y AP
Sbjct: 117 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAP 172
Query: 292 EYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
E ++ + + D++S G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 13/209 (6%)
Query: 113 NFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQG-HREWLAEVIFLG 171
NF++ + VYK R L VA+K D +G + E+ L
Sbjct: 3 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 56
Query: 172 HLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGL 231
L+HPN+VKL+ + L++EF+ + ++ + + L +P + F +GL
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAP 291
AF H V++RD K N+L++T+ KL+DFGLA+ G T + T Y AP
Sbjct: 116 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAP 171
Query: 292 EYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
E ++ + + D++S G + E++T R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 13/209 (6%)
Query: 113 NFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQG-HREWLAEVIFLG 171
NF++ + VYK R L VA+K D +G + E+ L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 172 HLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGL 231
L+HPN+VKL+ + L++EF+ + ++ + + L +P + F +GL
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAP 291
AF H V++RD K N+L++T+ KL+DFGLA+ G T + T Y AP
Sbjct: 117 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAP 172
Query: 292 EYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
E ++ + + D++S G + E++T R
Sbjct: 173 EILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 12/149 (8%)
Query: 174 SHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAK---G 230
HP L + E+ + E++ G + ++ S L + F AA+ G
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS-----RATFYAAEIILG 131
Query: 231 LAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAA 290
L FLH K ++YRD K NILLD D + K++DFG+ K+ GD + GT Y A
Sbjct: 132 LQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNEFCGTPDYIA 187
Query: 291 PEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
PE ++ D +SFGV+L E+L G+
Sbjct: 188 PEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 13/209 (6%)
Query: 113 NFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQG-HREWLAEVIFLG 171
NF++ + VYK R L VA+K D +G + E+ L
Sbjct: 11 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 64
Query: 172 HLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGL 231
L+HPN+VKL+ + L++EF+ + ++ + + L +P + F +GL
Sbjct: 65 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 123
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAP 291
AF H V++RD K N+L++T+ KL+DFGLA+ G T + T Y AP
Sbjct: 124 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAP 179
Query: 292 EYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
E ++ + + D++S G + E++T R
Sbjct: 180 EILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 88/184 (47%), Gaps = 14/184 (7%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHP-NLVKLIGYCCEDEHRVL-IYEFMARGSV 203
VAVK+ ++ HR ++E+ L H+ H N+V L+G C + ++ I EF G++
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 204 ENNLFSKVLLPLPWSIRMK----------IAFGAAKGLAFLHEAEKPVIYRDFKTSNILL 253
L SK +P+ K +F AKG+ FL A + I+RD NILL
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL--ASRKXIHRDLAARNILL 177
Query: 254 DTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLL 313
K+ DFGLA+D + + APE I T +SDV+SFGV+L
Sbjct: 178 SEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 237
Query: 314 EILT 317
EI +
Sbjct: 238 EIFS 241
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 13/209 (6%)
Query: 113 NFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQG-HREWLAEVIFLG 171
NF++ + VYK R L VA+K D +G + E+ L
Sbjct: 11 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 64
Query: 172 HLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGL 231
L+HPN+VKL+ + L++EF+ + ++ + + L +P + F +GL
Sbjct: 65 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 123
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAP 291
AF H V++RD K N+L++T+ KL+DFGLA+ G T + T Y AP
Sbjct: 124 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAP 179
Query: 292 EYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
E ++ + + D++S G + E++T R
Sbjct: 180 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 118/234 (50%), Gaps = 25/234 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+K S + ++E L
Sbjct: 11 LRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEIL 67
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN--W 124
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ AKG+ +L + + +++RD N+L+ T + K++DFG AK +K +
Sbjct: 125 CVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 176
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + A E I+ T +SDV+S+GV + E++T G K D PA E
Sbjct: 177 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 229
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
+ E+ L L+HPN+VKL+ + L++EF+ + ++ + + L +P +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 108
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
F +GLAF H V++RD K N+L++T+ KL+DFGLA+ G T +
Sbjct: 109 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEV 164
Query: 284 GTYGYAAPEYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
T Y APE ++ + + D++S G + E++T R
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
+ E+ L L+HPN+VKL+ + L++EF+ + ++ + + L +P +
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 107
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
F +GLAF H V++RD K N+L++T+ KL+DFGLA+ G T +
Sbjct: 108 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEV 163
Query: 284 GTYGYAAPEYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
T Y APE ++ + + D++S G + E++T R
Sbjct: 164 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 117/272 (43%), Gaps = 33/272 (12%)
Query: 142 QPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMAR 200
+ V VAVK+ D + + + ++E+ + + H N++ L+G C +D +I + ++
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASK 125
Query: 201 GSVENNLFSKVLLPLPWSIRMK--------------IAFGAAKGLAFLHEAEKPVIYRDF 246
G++ L ++ + +S + + A+G+ +L A + I+RD
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDL 183
Query: 247 KTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVY 306
N+L+ + K++DFGLA+D D +T + APE + T +SDV+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 307 SFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHK 366
SFGV++ EI T S P E ++ D P ++
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEE----------------LFKLLKEGHRMDKPANCTNE 287
Query: 367 AAMLAYHCLNHNPKARPLMRDIVDSLEPLQVL 398
M+ C + P RP + +V+ L+ + L
Sbjct: 288 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 89/188 (47%), Gaps = 18/188 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHP-NLVKLIGYCCEDEHRVL-IYEFMARGSV 203
VAVK+ ++ HR ++E+ L H+ H N+V L+G C + ++ I EF G++
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 204 ENNLFSKVLLPLPWSIR--------------MKIAFGAAKGLAFLHEAEKPVIYRDFKTS 249
L SK +P+ + + +F AKG+ FL A + I+RD
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAAR 168
Query: 250 NILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFG 309
NILL K+ DFGLA+D + + APE I T +SDV+SFG
Sbjct: 169 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 228
Query: 310 VVLLEILT 317
V+L EI +
Sbjct: 229 VLLWEIFS 236
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 118/234 (50%), Gaps = 25/234 (10%)
Query: 107 LRIIT-ANFRQDRVLXXXXXXCVYKGFISEDLREGLQ-PVPVAVKVHDGDNSYQGHREWL 164
LRI+ F++ +VL VYKG + EG + +PVA+K S + ++E L
Sbjct: 16 LRILKETEFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEIL 72
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV-------ENNLFSKVLLPLPW 217
E + + +P++ +L+G C + LI + M G + ++N+ S+ LL W
Sbjct: 73 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN--W 129
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+++ AKG+ +L + + +++RD N+L+ T + K++DFG AK +K +
Sbjct: 130 CVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 181
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSLDKSRPARE 330
+ + A E I+ T +SDV+S+GV + E++T G K D PA E
Sbjct: 182 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 234
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 89/188 (47%), Gaps = 18/188 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHP-NLVKLIGYCCEDEHRVL-IYEFMARGSV 203
VAVK+ ++ HR ++E+ L H+ H N+V L+G C + ++ I EF G++
Sbjct: 97 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 156
Query: 204 ENNLFSKVLLPLPWSIR--------------MKIAFGAAKGLAFLHEAEKPVIYRDFKTS 249
L SK +P+ + + +F AKG+ FL A + I+RD
Sbjct: 157 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAAR 214
Query: 250 NILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFG 309
NILL K+ DFGLA+D + + APE I T +SDV+SFG
Sbjct: 215 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 274
Query: 310 VVLLEILT 317
V+L EI +
Sbjct: 275 VLLWEIFS 282
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
+ E+ L L+HPN+VKL+ + L++EF+ + ++ + + L +P +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 108
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
F +GLAF H V++RD K N+L++T+ KL+DFGLA+ G T +
Sbjct: 109 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEV 164
Query: 284 GTYGYAAPEYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
T Y APE ++ + + D++S G + E++T R
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 13/209 (6%)
Query: 113 NFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQG-HREWLAEVIFLG 171
NF++ + VYK R L VA+K D +G + E+ L
Sbjct: 5 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 172 HLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGL 231
L+HPN+VKL+ + L++EF+ + ++ + + L +P + F +GL
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAP 291
AF H V++RD K N+L++T+ KL+DFGLA+ G T + T Y AP
Sbjct: 118 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAP 173
Query: 292 EYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
E ++ + + D++S G + E++T R
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 7/158 (4%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRM 221
+ + E+ L + P +V G D + E M GS++ L K +P I
Sbjct: 112 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILG 169
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
K++ KGL +L E K +++RD K SNIL+++ KL DFG++ + ++
Sbjct: 170 KVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANS 224
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
+GT Y +PE + H + +SD++S G+ L+E+ GR
Sbjct: 225 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 73/148 (49%), Gaps = 12/148 (8%)
Query: 175 HPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAK---GL 231
HP L + E+ + E++ G + ++ S L + F AA+ GL
Sbjct: 77 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS-----RATFYAAEIILGL 131
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAP 291
FLH K ++YRD K NILLD D + K++DFG+ K+ GD + GT Y AP
Sbjct: 132 QFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNXFCGTPDYIAP 187
Query: 292 EYIMTGHLTPRSDVYSFGVVLLEILTGR 319
E ++ D +SFGV+L E+L G+
Sbjct: 188 EILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 108/212 (50%), Gaps = 18/212 (8%)
Query: 112 ANFRQDRVLXXXXXXCVYKG-FISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFL 170
R+ +VL V+KG +I E E ++ +PV +KV + + Q + ++ +
Sbjct: 13 TELRKLKVLGSGVFGTVHKGVWIPEG--ESIK-IPVCIKVIEDKSGRQSFQAVTDHMLAI 69
Query: 171 GHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNL--FSKVLLP---LPWSIRMKIAF 225
G L H ++V+L+G C + L+ +++ GS+ +++ L P L W +++
Sbjct: 70 GSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI---- 124
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
AKG+ +L E +++R+ N+LL + +++DFG+A P DK + +
Sbjct: 125 --AKGMYYLEE--HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP 180
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+ A E I G T +SDV+S+GV + E++T
Sbjct: 181 IKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 89/188 (47%), Gaps = 18/188 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHP-NLVKLIGYCCEDEHRVL-IYEFMARGSV 203
VAVK+ ++ HR ++E+ L H+ H N+V L+G C + ++ I EF G++
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 204 ENNLFSKVLLPLPWSIR--------------MKIAFGAAKGLAFLHEAEKPVIYRDFKTS 249
L SK +P+ + + +F AKG+ FL A + I+RD
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAAR 168
Query: 250 NILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFG 309
NILL K+ DFGLA+D + + APE I T +SDV+SFG
Sbjct: 169 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 228
Query: 310 VVLLEILT 317
V+L EI +
Sbjct: 229 VLLWEIFS 236
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 7/158 (4%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRM 221
+ + E+ L + P +V G D + E M GS++ L K +P I
Sbjct: 60 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KEAKRIPEEILG 117
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
K++ +GLA+L E + +++RD K SNIL+++ KL DFG++ + ++
Sbjct: 118 KVSIAVLRGLAYLREKHQ-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANS 172
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
+GT Y APE + H + +SD++S G+ L+E+ GR
Sbjct: 173 FVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 84/187 (44%), Gaps = 17/187 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMARGSVE 204
VAVK+ ++E+ + HL H N+V L+G C ++I E+ G +
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 205 NNLFSKVLLPLPWSIR--------------MKIAFGAAKGLAFLHEAEKPVIYRDFKTSN 250
N L K L +S + + A+G+AFL A K I+RD N
Sbjct: 139 NFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARN 196
Query: 251 ILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGV 310
+LL + AK+ DFGLA+D V + APE I T +SDV+S+G+
Sbjct: 197 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 256
Query: 311 VLLEILT 317
+L EI +
Sbjct: 257 LLWEIFS 263
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 12/184 (6%)
Query: 144 VPVAVKVHDGDNSYQGH-REWLAEVIFLGHLSHPNLVKLIGYCCEDEHR-----VLIYEF 197
+ VAVK DNS Q E+L+E + SHPN+++L+G C E + ++I F
Sbjct: 63 LKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPF 122
Query: 198 MARGSVENNLFSKVLLP----LPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILL 253
M G + L L +P +K A G+ +L + + ++RD N +L
Sbjct: 123 MKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL--SNRNFLHRDLAARNCML 180
Query: 254 DTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLL 313
D ++DFGL+K GD + A E + T +SDV++FGV +
Sbjct: 181 RDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMW 240
Query: 314 EILT 317
EI T
Sbjct: 241 EIAT 244
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 7/158 (4%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRM 221
+ + E+ L + P +V G D + E M GS++ L K +P I
Sbjct: 77 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILG 134
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
K++ KGL +L E K +++RD K SNIL+++ KL DFG++ + ++
Sbjct: 135 KVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANS 189
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
+GT Y +PE + H + +SD++S G+ L+E+ GR
Sbjct: 190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 13/209 (6%)
Query: 113 NFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQG-HREWLAEVIFLG 171
NF++ + VYK R L VA+K D +G + E+ L
Sbjct: 7 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 172 HLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGL 231
L+HPN+VKL+ + L++EF++ +++ + + L +P + F +GL
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAP 291
AF H V++RD K N+L++T+ KL+DFGLA+ +++ + T Y AP
Sbjct: 120 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 292 EYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
E ++ + + D++S G + E++T R
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 13/209 (6%)
Query: 113 NFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQG-HREWLAEVIFLG 171
NF++ + VYK R L VA+K D +G + E+ L
Sbjct: 6 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 172 HLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGL 231
L+HPN+VKL+ + L++EF++ +++ + + L +P + F +GL
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAP 291
AF H V++RD K N+L++T+ KL+DFGLA+ +++ + T Y AP
Sbjct: 119 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 292 EYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
E ++ + + D++S G + E++T R
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 7/158 (4%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRM 221
+ + E+ L + P +V G D + E M GS++ L K +P I
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILG 107
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
K++ KGL +L E K +++RD K SNIL+++ KL DFG++ + ++
Sbjct: 108 KVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANS 162
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
+GT Y +PE + H + +SD++S G+ L+E+ GR
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMARGSVE 204
VAVK+ ++E+ + HL H N+V L+G C ++I E+ G +
Sbjct: 64 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 123
Query: 205 NNLFSKVLLPL-------------------PWSIRMKIAFGA--AKGLAFLHEAEKPVIY 243
N L K L P +R + F + A+G+AFL A K I+
Sbjct: 124 NFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL--ASKNCIH 181
Query: 244 RDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRS 303
RD N+LL + AK+ DFGLA+D V + APE I T +S
Sbjct: 182 RDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS 241
Query: 304 DVYSFGVVLLEILT 317
DV+S+G++L EI +
Sbjct: 242 DVWSYGILLWEIFS 255
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 7/158 (4%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRM 221
+ + E+ L + P +V G D + E M GS++ L K +P I
Sbjct: 53 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILG 110
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
K++ KGL +L E K +++RD K SNIL+++ KL DFG++ G D+ ++
Sbjct: 111 KVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDE--MANE 165
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
+GT Y +PE + H + +SD++S G+ L+E+ GR
Sbjct: 166 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 7/158 (4%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRM 221
+ + E+ L + P +V G D + E M GS++ L K +P I
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILG 107
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
K++ KGL +L E K +++RD K SNIL+++ KL DFG++ + ++
Sbjct: 108 KVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANS 162
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
+GT Y +PE + H + +SD++S G+ L+E+ GR
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 13/209 (6%)
Query: 113 NFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQG-HREWLAEVIFLG 171
NF++ + VYK R L VA+K D +G + E+ L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 172 HLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGL 231
L+HPN+VKL+ + L++EF+ + ++ + + L +P + F +GL
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAP 291
+F H V++RD K N+L++T+ KL+DFGLA+ G T + T Y AP
Sbjct: 117 SFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAP 172
Query: 292 EYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
E ++ + + D++S G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 7/158 (4%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRM 221
+ + E+ L + P +V G D + E M GS++ L K +P I
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILG 107
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
K++ KGL +L E K +++RD K SNIL+++ KL DFG++ + ++
Sbjct: 108 KVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANS 162
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
+GT Y +PE + H + +SD++S G+ L+E+ GR
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 106/257 (41%), Gaps = 31/257 (12%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV 203
+ VAVK D E+L E + + HPNLV+L+G C + +I EFM G++
Sbjct: 37 LTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNL 94
Query: 204 ENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
+ L + + + +A + + +L +K I+RD N L+ ++ K++D
Sbjct: 95 LDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVAD 152
Query: 264 FGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GRKSL 322
FGL++ GD + APE + + +SDV++FGV+L EI T G
Sbjct: 153 FGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
Query: 323 DKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDY----PVKGVHKAAMLAYHCLNHN 378
P++ L LE DY P K L C N
Sbjct: 212 PGIDPSQVYEL---------------------LEKDYRMERPEGCPEKVYELMRACWQWN 250
Query: 379 PKARPLMRDIVDSLEPL 395
P RP +I + E +
Sbjct: 251 PSDRPSFAEIHQAFETM 267
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 104/248 (41%), Gaps = 10/248 (4%)
Query: 147 AVKVHDGDNSYQGH-REWLAEVIFLGHLSHPNLVKLIGYCCEDEHR--VLIYEFMARGSV 203
V V +S + H R++ E+ L L H N+VK G C R LI EF+ GS+
Sbjct: 44 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSL 103
Query: 204 ENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
L K + ++ KG+ +L K I+RD T NIL++ + K+ D
Sbjct: 104 REYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGD 160
Query: 264 FGLAKDGPEGDKSHVSTRIMGT--YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKS 321
FGL K P+ DK + G + APE + + SDV+SFGVVL E+ T +
Sbjct: 161 FGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEK 219
Query: 322 LDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKA 381
KS PA + ++ P + M+ C N+N
Sbjct: 220 -SKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQ 278
Query: 382 RPLMRDIV 389
RP RD+
Sbjct: 279 RPSFRDLA 286
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 13/209 (6%)
Query: 113 NFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQG-HREWLAEVIFLG 171
NF++ + VYK R L VA+K D +G + E+ L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 172 HLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGL 231
L+HPN+VKL+ + L++EF+ + +++ + + L +P + F +GL
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAP 291
AF H V++RD K N+L++T+ KL+DFGLA+ +++ + T Y AP
Sbjct: 117 AFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 292 EYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
E ++ + + D++S G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV 203
+ VAVK D E+L E + + HPNLV+L+G C + +I EFM G++
Sbjct: 37 LTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 94
Query: 204 ENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
+ L + + + +A + + +L +K I+RD N L+ ++ K++D
Sbjct: 95 LDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVAD 152
Query: 264 FGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
FGL++ GD + APE + + +SDV++FGV+L EI T
Sbjct: 153 FGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 7/158 (4%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRM 221
+ + E+ L + P +V G D + E M GS++ L K +P I
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILG 107
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
K++ KGL +L E K +++RD K SNIL+++ KL DFG++ + ++
Sbjct: 108 KVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANS 162
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
+GT Y +PE + H + +SD++S G+ L+E+ GR
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 7/158 (4%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRM 221
+ + E+ L + P +V G D + E M GS++ L K +P I
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILG 107
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
K++ KGL +L E K +++RD K SNIL+++ KL DFG++ + ++
Sbjct: 108 KVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANS 162
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
+GT Y +PE + H + +SD++S G+ L+E+ GR
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV 203
+ VAVK D E+L E + + HPNLV+L+G C + +I EFM G++
Sbjct: 40 LTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNL 97
Query: 204 ENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
+ L + + + +A + + +L +K I+RD N L+ ++ K++D
Sbjct: 98 LDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVAD 155
Query: 264 FGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
FGL++ GD + APE + + +SDV++FGV+L EI T
Sbjct: 156 FGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 39/219 (17%)
Query: 127 CVYKGFISEDLREGLQPVPVAVKVH--DGDNSYQGHREWLAEVIFLGHLSHPNLVKLI-- 182
CV+K + D VAVK+ S+Q RE + + H NL++ I
Sbjct: 30 CVWKAQLMNDF--------VAVKIFPLQDKQSWQSERE----IFSTPGMKHENLLQFIAA 77
Query: 183 ---GYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHE--- 236
G E E LI F +GS+ + L ++ W+ +A ++GL++LHE
Sbjct: 78 EKRGSNLEVE-LWLITAFHDKGSLTDYLKGNII---TWNELCHVAETMSRGLSYLHEDVP 133
Query: 237 -----AEKPVI-YRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAA 290
KP I +RDFK+ N+LL +D A L+DFGLA G + +GT Y A
Sbjct: 134 WCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMA 193
Query: 291 PEYIMTGHLT------PRSDVYSFGVVLLEILTGRKSLD 323
PE ++ G + R D+Y+ G+VL E+++ K+ D
Sbjct: 194 PE-VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 13/209 (6%)
Query: 113 NFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQG-HREWLAEVIFLG 171
NF++ + VYK R L VA+K D +G + E+ L
Sbjct: 7 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 172 HLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGL 231
L+HPN+VKL+ + L++EF++ ++ + + L +P + F +GL
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAP 291
AF H V++RD K N+L++T+ KL+DFGLA+ +++ + T Y AP
Sbjct: 120 AFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 292 EYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
E ++ + + D++S G + E++T R
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
+ E+ L L+HPN+VKL+ + L++EF+ + ++ + + L +P +
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 110
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
F +GLAF H V++RD K N+L++T+ KL+DFGLA+ +++ +
Sbjct: 111 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 167
Query: 284 GTYGYAAPEYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
T Y APE ++ + + D++S G + E++T R
Sbjct: 168 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
+ E+ L L+HPN+VKL+ + L++EF+ + ++ + + L +P +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 108
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
F +GLAF H V++RD K N+L++T+ KL+DFGLA+ +++ +
Sbjct: 109 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 165
Query: 284 GTYGYAAPEYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
T Y APE ++ + + D++S G + E++T R
Sbjct: 166 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
+ E+ L L+HPN+VKL+ + L++EF+ + ++ + + L +P +
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 107
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
F +GLAF H V++RD K N+L++T+ KL+DFGLA+ +++ +
Sbjct: 108 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 164
Query: 284 GTYGYAAPEYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
T Y APE ++ + + D++S G + E++T R
Sbjct: 165 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
+ E+ L L+HPN+VKL+ + L++EF+ + ++ + + L +P +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 108
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
F +GLAF H V++RD K N+L++T+ KL+DFGLA+ +++ +
Sbjct: 109 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 165
Query: 284 GTYGYAAPEYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
T Y APE ++ + + D++S G + E++T R
Sbjct: 166 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
+ E+ L L+HPN+VKL+ + L++EF+ + ++ + + L +P +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 111
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
F +GLAF H V++RD K N+L++T+ KL+DFGLA+ +++ +
Sbjct: 112 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 284 GTYGYAAPEYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
T Y APE ++ + + D++S G + E++T R
Sbjct: 169 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
+ E+ L L+HPN+VKL+ + L++EF+ + ++ + + L +P +
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 110
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
F +GLAF H V++RD K N+L++T+ KL+DFGLA+ +++ +
Sbjct: 111 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 167
Query: 284 GTYGYAAPEYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
T Y APE ++ + + D++S G + E++T R
Sbjct: 168 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 13/209 (6%)
Query: 113 NFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQG-HREWLAEVIFLG 171
NF++ + VYK R L VA+K D +G + E+ L
Sbjct: 7 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 172 HLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGL 231
L+HPN+VKL+ + L++EF+ + ++ + + L +P + F +GL
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAP 291
AF H V++RD K N+L++T+ KL+DFGLA+ +++ + T Y AP
Sbjct: 120 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 292 EYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
E ++ + + D++S G + E++T R
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 13/209 (6%)
Query: 113 NFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQG-HREWLAEVIFLG 171
NF++ + VYK R L VA+K D +G + E+ L
Sbjct: 5 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 172 HLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGL 231
L+HPN+VKL+ + L++EF++ ++ + + L +P + F +GL
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAP 291
AF H V++RD K N+L++T+ KL+DFGLA+ +++ + T Y AP
Sbjct: 118 AFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 292 EYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
E ++ + + D++S G + E++T R
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 13/209 (6%)
Query: 113 NFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQG-HREWLAEVIFLG 171
NF++ + VYK R L VA+K D +G + E+ L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 172 HLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGL 231
L+HPN+VKL+ + L++EF+ + ++ + + L +P + F +GL
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAP 291
AF H V++RD K N+L++T+ KL+DFGLA+ +++ + T Y AP
Sbjct: 117 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 292 EYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
E ++ + + D++S G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
+ E+ L L+HPN+VKL+ + L++EF+ + ++ + + L +P +
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 110
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
F +GLAF H V++RD K N+L++T+ KL+DFGLA+ +++ +
Sbjct: 111 LFQLLQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 167
Query: 284 GTYGYAAPEYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
T Y APE ++ + + D++S G + E++T R
Sbjct: 168 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 13/209 (6%)
Query: 113 NFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGH-REWLAEVIFLG 171
NF++ + VYK R L VA+K D +G + E+ L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 172 HLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGL 231
L+HPN+VKL+ + L++EF+ + ++ + + L +P + F +GL
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAP 291
AF H V++RD K N+L++T+ KL+DFGLA+ +++ + T Y AP
Sbjct: 117 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 292 EYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
E ++ + + D++S G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
+ E+ L L+HPN+VKL+ + L++EF+ + ++ + + L +P +
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 107
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
F +GLAF H V++RD K N+L++T+ KL+DFGLA+ +++ +
Sbjct: 108 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 164
Query: 284 GTYGYAAPEYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
T Y APE ++ + + D++S G + E++T R
Sbjct: 165 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV 203
+ VAVK D E+L E + + HPNLV+L+G C + +I EFM G++
Sbjct: 44 LTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 101
Query: 204 ENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
+ L + + + +A + + +L +K I+RD N L+ ++ K++D
Sbjct: 102 LDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVAD 159
Query: 264 FGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
FGL++ GD + APE + + +SDV++FGV+L EI T
Sbjct: 160 FGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV 203
+ VAVK D E+L E + + HPNLV+L+G C + +I EFM G++
Sbjct: 39 LTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNL 96
Query: 204 ENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
+ L + + + +A + + +L +K I+RD N L+ ++ K++D
Sbjct: 97 LDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVAD 154
Query: 264 FGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
FGL++ GD + APE + + +SDV++FGV+L EI T
Sbjct: 155 FGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV 203
+ VAVK D E+L E + + HPNLV+L+G C + +I EFM G++
Sbjct: 44 LTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 101
Query: 204 ENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
+ L + + + +A + + +L +K I+RD N L+ ++ K++D
Sbjct: 102 LDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVAD 159
Query: 264 FGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
FGL++ GD + APE + + +SDV++FGV+L EI T
Sbjct: 160 FGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
+ E+ L L+HPN+VKL+ + L++EF+ + ++ + + L +P +
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 109
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
F +GLAF H V++RD K N+L++T+ KL+DFGLA+ +++ +
Sbjct: 110 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 166
Query: 284 GTYGYAAPEYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
T Y APE ++ + + D++S G + E++T R
Sbjct: 167 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 7/158 (4%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRM 221
+ + E+ L + P +V G D + E M GS++ L K +P I
Sbjct: 69 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILG 126
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
K++ KGL +L E K +++RD K SNIL+++ KL DFG++ + ++
Sbjct: 127 KVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANS 181
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
+GT Y +PE + H + +SD++S G+ L+E+ GR
Sbjct: 182 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
+ E+ L L+HPN+VKL+ + L++EF+ + ++ + + L +P +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 111
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
F +GLAF H V++RD K N+L++T+ KL+DFGLA+ +++ +
Sbjct: 112 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 284 GTYGYAAPEYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
T Y APE ++ + + D++S G + E++T R
Sbjct: 169 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
+ E+ L L+HPN+VKL+ + L++EF+ + ++ + + L +P +
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 109
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
F +GLAF H V++RD K N+L++T+ KL+DFGLA+ +++ +
Sbjct: 110 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 166
Query: 284 GTYGYAAPEYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
T Y APE ++ + + D++S G + E++T R
Sbjct: 167 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 13/209 (6%)
Query: 113 NFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQG-HREWLAEVIFLG 171
NF++ + VYK R L VA+K D +G + E+ L
Sbjct: 8 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 61
Query: 172 HLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGL 231
L+HPN+VKL+ + L++EF+ + ++ + + L +P + F +GL
Sbjct: 62 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 120
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAP 291
AF H V++RD K N+L++T+ KL+DFGLA+ +++ + T Y AP
Sbjct: 121 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 176
Query: 292 EYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
E ++ + + D++S G + E++T R
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV 203
+ VAVK D E+L E + + HPNLV+L+G C + +I EFM G++
Sbjct: 39 LTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 96
Query: 204 ENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
+ L + + + +A + + +L +K I+RD N L+ ++ K++D
Sbjct: 97 LDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVAD 154
Query: 264 FGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
FGL++ GD + APE + + +SDV++FGV+L EI T
Sbjct: 155 FGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV 203
+ VAVK D E+L E + + HPNLV+L+G C + +I EFM G++
Sbjct: 39 LTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNL 96
Query: 204 ENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
+ L + + + +A + + +L +K I+RD N L+ ++ K++D
Sbjct: 97 LDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVAD 154
Query: 264 FGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
FGL++ GD + APE + + +SDV++FGV+L EI T
Sbjct: 155 FGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
+ E+ L L+HPN+VKL+ + L++EF+ + ++ + + L +P +
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 109
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
F +GLAF H V++RD K N+L++T+ KL+DFGLA+ +++ +
Sbjct: 110 LFQLLQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 166
Query: 284 GTYGYAAPEYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
T Y APE ++ + + D++S G + E++T R
Sbjct: 167 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 105/247 (42%), Gaps = 10/247 (4%)
Query: 147 AVKVHDGDNSYQGH-REWLAEVIFLGHLSHPNLVKLIGYCCEDEHR--VLIYEFMARGSV 203
V V +S + H R++ E+ L L H N+VK G C R LI E++ GS+
Sbjct: 40 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 99
Query: 204 ENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
+ L K + ++ KG+ +L K I+RD T NIL++ + K+ D
Sbjct: 100 RDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGD 156
Query: 264 FGLAKDGPEGDKSHVSTRIMGT--YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKS 321
FGL K P+ DK + G + APE + + SDV+SFGVVL E+ T +
Sbjct: 157 FGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEK 215
Query: 322 LDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKA 381
KS PA + ++ P + M+ C N+N
Sbjct: 216 -SKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQ 274
Query: 382 RPLMRDI 388
RP RD+
Sbjct: 275 RPSFRDL 281
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 105/247 (42%), Gaps = 10/247 (4%)
Query: 147 AVKVHDGDNSYQGH-REWLAEVIFLGHLSHPNLVKLIGYCCEDEHR--VLIYEFMARGSV 203
V V +S + H R++ E+ L L H N+VK G C R LI E++ GS+
Sbjct: 45 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 104
Query: 204 ENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
+ L K + ++ KG+ +L K I+RD T NIL++ + K+ D
Sbjct: 105 RDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGD 161
Query: 264 FGLAKDGPEGDKSHVSTRIMGT--YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKS 321
FGL K P+ DK + G + APE + + SDV+SFGVVL E+ T +
Sbjct: 162 FGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEK 220
Query: 322 LDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKA 381
KS PA + ++ P + M+ C N+N
Sbjct: 221 -SKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQ 279
Query: 382 RPLMRDI 388
RP RD+
Sbjct: 280 RPSFRDL 286
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 99/232 (42%), Gaps = 9/232 (3%)
Query: 161 REWLAEVIFLGHLSHPNLVKLIGYCCEDEHR--VLIYEFMARGSVENNLFSKVLLPLPWS 218
R++ E+ L L H N+VK G C R LI E++ GS+ + L K +
Sbjct: 54 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHI 112
Query: 219 IRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHV 278
++ KG+ +L K I+RD T NIL++ + K+ DFGL K P+ DK
Sbjct: 113 KLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXX 169
Query: 279 STRIMGT--YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADW 336
+ G + APE + + SDV+SFGVVL E+ T + KS PA +
Sbjct: 170 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEK-SKSPPAEFMRMIGN 228
Query: 337 AXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDI 388
++ P + M+ C N+N RP RD+
Sbjct: 229 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 280
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 99/233 (42%), Gaps = 9/233 (3%)
Query: 161 REWLAEVIFLGHLSHPNLVKLIGYCCEDEHR--VLIYEFMARGSVENNLFSKVLLPLPWS 218
R++ E+ L L H N+VK G C R LI E++ GS+ + L K +
Sbjct: 61 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHI 119
Query: 219 IRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHV 278
++ KG+ +L K I+RD T NIL++ + K+ DFGL K P+ DK
Sbjct: 120 KLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXX 176
Query: 279 STRIMGT--YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADW 336
+ G + APE + + SDV+SFGVVL E+ T + KS PA +
Sbjct: 177 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEK-SKSPPAEFMRMIGN 235
Query: 337 AXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIV 389
++ P + M+ C N+N RP RD+
Sbjct: 236 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA 288
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 99/233 (42%), Gaps = 9/233 (3%)
Query: 161 REWLAEVIFLGHLSHPNLVKLIGYCCEDEHR--VLIYEFMARGSVENNLFSKVLLPLPWS 218
R++ E+ L L H N+VK G C R LI E++ GS+ + L K +
Sbjct: 56 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHI 114
Query: 219 IRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHV 278
++ KG+ +L K I+RD T NIL++ + K+ DFGL K P+ DK
Sbjct: 115 KLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEFF 171
Query: 279 STRIMGT--YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADW 336
+ G + APE + + SDV+SFGVVL E+ T + KS PA +
Sbjct: 172 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEK-SKSPPAEFMRMIGN 230
Query: 337 AXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIV 389
++ P + M+ C N+N RP RD+
Sbjct: 231 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA 283
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV 203
+ VAVK D E+L E + + HPNLV+L+G C + +I EFM G++
Sbjct: 44 LTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNL 101
Query: 204 ENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
+ L + + + +A + + +L +K I+RD N L+ ++ K++D
Sbjct: 102 LDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVAD 159
Query: 264 FGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
FGL++ GD + APE + + +SDV++FGV+L EI T
Sbjct: 160 FGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV 203
+ VAVK D E+L E + + HPNLV+L+G C + +I EFM G++
Sbjct: 39 LTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 96
Query: 204 ENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
+ L + + + +A + + +L +K I+RD N L+ ++ K++D
Sbjct: 97 LDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVAD 154
Query: 264 FGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
FGL++ GD + APE + + +SDV++FGV+L EI T
Sbjct: 155 FGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 99/233 (42%), Gaps = 9/233 (3%)
Query: 161 REWLAEVIFLGHLSHPNLVKLIGYCCEDEHR--VLIYEFMARGSVENNLFSKVLLPLPWS 218
R++ E+ L L H N+VK G C R LI E++ GS+ + L K +
Sbjct: 62 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHI 120
Query: 219 IRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHV 278
++ KG+ +L K I+RD T NIL++ + K+ DFGL K P+ DK
Sbjct: 121 KLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXX 177
Query: 279 STRIMGT--YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADW 336
+ G + APE + + SDV+SFGVVL E+ T + KS PA +
Sbjct: 178 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEK-SKSPPAEFMRMIGN 236
Query: 337 AXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIV 389
++ P + M+ C N+N RP RD+
Sbjct: 237 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA 289
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 99/233 (42%), Gaps = 9/233 (3%)
Query: 161 REWLAEVIFLGHLSHPNLVKLIGYCCEDEHR--VLIYEFMARGSVENNLFSKVLLPLPWS 218
R++ E+ L L H N+VK G C R LI E++ GS+ + L K +
Sbjct: 59 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHI 117
Query: 219 IRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHV 278
++ KG+ +L K I+RD T NIL++ + K+ DFGL K P+ DK
Sbjct: 118 KLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXX 174
Query: 279 STRIMGT--YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADW 336
+ G + APE + + SDV+SFGVVL E+ T + KS PA +
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEK-SKSPPAEFMRMIGN 233
Query: 337 AXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIV 389
++ P + M+ C N+N RP RD+
Sbjct: 234 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA 286
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV 203
+ VAVK D E+L E + + HPNLV+L+G C + +I EFM G++
Sbjct: 37 LTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 94
Query: 204 ENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
+ L + + + +A + + +L +K I+RD N L+ ++ K++D
Sbjct: 95 LDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVAD 152
Query: 264 FGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
FGL++ GD + APE + + +SDV++FGV+L EI T
Sbjct: 153 FGLSRLMT-GDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 105/247 (42%), Gaps = 10/247 (4%)
Query: 147 AVKVHDGDNSYQGH-REWLAEVIFLGHLSHPNLVKLIGYCCEDEHR--VLIYEFMARGSV 203
V V +S + H R++ E+ L L H N+VK G C R LI E++ GS+
Sbjct: 41 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 204 ENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
+ L K + ++ KG+ +L K I+RD T NIL++ + K+ D
Sbjct: 101 RDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGD 157
Query: 264 FGLAKDGPEGDKSHVSTRIMGT--YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKS 321
FGL K P+ DK + G + APE + + SDV+SFGVVL E+ T +
Sbjct: 158 FGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEK 216
Query: 322 LDKSRPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKA 381
KS PA + ++ P + M+ C N+N
Sbjct: 217 -SKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQ 275
Query: 382 RPLMRDI 388
RP RD+
Sbjct: 276 RPSFRDL 282
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 18/188 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHP-NLVKLIGYCCEDEHRVL-IYEFMARGSV 203
VAVK+ ++ HR ++E+ L H+ H N+V L+G C + ++ I EF G++
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 204 ENNLFSKVLLPLPW------------SIRMKI--AFGAAKGLAFLHEAEKPVIYRDFKTS 249
L SK +P+ ++ I +F AKG+ FL A + I+RD
Sbjct: 122 STYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAAR 179
Query: 250 NILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFG 309
NILL K+ DFGLA+D + + APE I T +SDV+SFG
Sbjct: 180 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 239
Query: 310 VVLLEILT 317
V+L EI +
Sbjct: 240 VLLWEIFS 247
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 99/233 (42%), Gaps = 9/233 (3%)
Query: 161 REWLAEVIFLGHLSHPNLVKLIGYCCEDEHR--VLIYEFMARGSVENNLFSKVLLPLPWS 218
R++ E+ L L H N+VK G C R LI E++ GS+ + L K +
Sbjct: 56 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHI 114
Query: 219 IRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHV 278
++ KG+ +L K I+RD T NIL++ + K+ DFGL K P+ DK
Sbjct: 115 KLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXX 171
Query: 279 STRIMGT--YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADW 336
+ G + APE + + SDV+SFGVVL E+ T + KS PA +
Sbjct: 172 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEK-SKSPPAEFMRMIGN 230
Query: 337 AXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIV 389
++ P + M+ C N+N RP RD+
Sbjct: 231 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA 283
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV 203
+ VAVK D E+L E + + HPNLV+L+G C + +I EFM G++
Sbjct: 44 LTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 101
Query: 204 ENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
+ L + + + +A + + +L +K I+RD N L+ ++ K++D
Sbjct: 102 LDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVAD 159
Query: 264 FGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
FGL++ GD + APE + + +SDV++FGV+L EI T
Sbjct: 160 FGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV 203
+ VAVK D E+L E + + HPNLV+L+G C + +I EFM G++
Sbjct: 52 LTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 109
Query: 204 ENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
+ L + + + +A + + +L +K I+RD N L+ ++ K++D
Sbjct: 110 LDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVAD 167
Query: 264 FGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
FGL++ GD + APE + + +SDV++FGV+L EI T
Sbjct: 168 FGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 99/233 (42%), Gaps = 9/233 (3%)
Query: 161 REWLAEVIFLGHLSHPNLVKLIGYCCEDEHR--VLIYEFMARGSVENNLFSKVLLPLPWS 218
R++ E+ L L H N+VK G C R LI E++ GS+ + L K +
Sbjct: 63 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHI 121
Query: 219 IRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHV 278
++ KG+ +L K I+RD T NIL++ + K+ DFGL K P+ DK
Sbjct: 122 KLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXX 178
Query: 279 STRIMGT--YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADW 336
+ G + APE + + SDV+SFGVVL E+ T + KS PA +
Sbjct: 179 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEK-SKSPPAEFMRMIGN 237
Query: 337 AXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIV 389
++ P + M+ C N+N RP RD+
Sbjct: 238 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA 290
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 3/156 (1%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRM 221
E+L E + + HPNLV+L+G C + +I EFM G++ + L + + +
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 119
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
+A + + +L +K I+RD N L+ ++ K++DFGL++ GD
Sbjct: 120 YMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAG 176
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+ APE + + +SDV++FGV+L EI T
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 99/233 (42%), Gaps = 9/233 (3%)
Query: 161 REWLAEVIFLGHLSHPNLVKLIGYCCEDEHR--VLIYEFMARGSVENNLFSKVLLPLPWS 218
R++ E+ L L H N+VK G C R LI E++ GS+ + L K +
Sbjct: 87 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHI 145
Query: 219 IRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHV 278
++ KG+ +L K I+RD T NIL++ + K+ DFGL K P+ DK
Sbjct: 146 KLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXX 202
Query: 279 STRIMGT--YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADW 336
+ G + APE + + SDV+SFGVVL E+ T + KS PA +
Sbjct: 203 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEK-SKSPPAEFMRMIGN 261
Query: 337 AXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIV 389
++ P + M+ C N+N RP RD+
Sbjct: 262 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA 314
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV 203
+ VAVK D E+L E + + HPNLV+L+G C + +I EFM G++
Sbjct: 40 LTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 97
Query: 204 ENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
+ L + + + +A + + +L +K I+RD N L+ ++ K++D
Sbjct: 98 LDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVAD 155
Query: 264 FGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
FGL++ GD + APE + + +SDV++FGV+L EI T
Sbjct: 156 FGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV 203
+ VAVK D E+L E + + HPNLV+L+G C + +I EFM G++
Sbjct: 41 LTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 98
Query: 204 ENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
+ L + + + +A + + +L +K I+RD N L+ ++ K++D
Sbjct: 99 LDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVAD 156
Query: 264 FGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
FGL++ GD + APE + + +SDV++FGV+L EI T
Sbjct: 157 FGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV 203
+ VAVK D E+L E + + HPNLV+L+G C + +I EFM G++
Sbjct: 39 LTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 96
Query: 204 ENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
+ L + + + +A + + +L +K I+RD N L+ ++ K++D
Sbjct: 97 LDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVAD 154
Query: 264 FGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
FGL++ GD + APE + + +SDV++FGV+L EI T
Sbjct: 155 FGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 3/156 (1%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRM 221
++L E L SHPN+V+LIG C + + ++ E + G L ++ L +
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG-ARLRVKTLL 216
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
++ AA G+ +L K I+RD N L+ K+SDFG++++ +G +
Sbjct: 217 QMVGDAAAGMEYLE--SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGL 274
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+ APE + G + SDV+SFG++L E +
Sbjct: 275 RQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV 203
+ VAVK D E+L E + + HPNLV+L+G C + +I EFM G++
Sbjct: 43 LTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 100
Query: 204 ENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
+ L + + + +A + + +L +K I+RD N L+ ++ K++D
Sbjct: 101 LDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVAD 158
Query: 264 FGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
FGL++ GD + APE + + +SDV++FGV+L EI T
Sbjct: 159 FGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 104/246 (42%), Gaps = 28/246 (11%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VA+K+ D + + + E+ L P + K G +D +I E++ GS +
Sbjct: 55 VAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD 114
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFG 265
L PL + I KGL +LH +K I+RD K +N+LL KL+DFG
Sbjct: 115 LLEPG---PLDETQIATILREILKGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFG 169
Query: 266 LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKS 325
+A G D +GT + APE I ++D++S G+ +E+ G +
Sbjct: 170 VA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 227
Query: 326 RPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDY--PVKGVHKAAMLAYHCLNHNPKARP 383
P + L P LEG+Y P+K +A CLN P RP
Sbjct: 228 HPMKVLFLIPKNNP-------------PTLEGNYSKPLKEFVEA------CLNKEPSFRP 268
Query: 384 LMRDIV 389
++++
Sbjct: 269 TAKELL 274
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV 203
+ VAVK D E+L E + + HPNLV+L+G C + +I EFM G++
Sbjct: 39 LTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 96
Query: 204 ENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
+ L + + + +A + + +L +K I+RD N L+ ++ K++D
Sbjct: 97 LDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVAD 154
Query: 264 FGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
FGL++ GD + APE + + +SDV++FGV+L EI T
Sbjct: 155 FGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 3/156 (1%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRM 221
E+L E + + HPNLV+L+G C + +I EFM G++ + L + + +
Sbjct: 57 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 116
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
+A + + +L +K I+RD N L+ ++ K++DFGL++ GD
Sbjct: 117 YMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAG 173
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+ APE + + +SDV++FGV+L EI T
Sbjct: 174 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 104/246 (42%), Gaps = 28/246 (11%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VA+K+ D + + + E+ L P + K G +D +I E++ GS +
Sbjct: 50 VAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD 109
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFG 265
L PL + I KGL +LH +K I+RD K +N+LL KL+DFG
Sbjct: 110 LLEPG---PLDETQIATILREILKGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFG 164
Query: 266 LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKS 325
+A G D +GT + APE I ++D++S G+ +E+ G +
Sbjct: 165 VA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 222
Query: 326 RPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDY--PVKGVHKAAMLAYHCLNHNPKARP 383
P + L P LEG+Y P+K +A CLN P RP
Sbjct: 223 HPMKVLFLIPKNNP-------------PTLEGNYSKPLKEFVEA------CLNKEPSFRP 263
Query: 384 LMRDIV 389
++++
Sbjct: 264 TAKELL 269
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV 203
+ VAVK D E+L E + + HPNLV+L+G C + +I EFM G++
Sbjct: 41 LTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 98
Query: 204 ENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
+ L + + + +A + + +L +K I+RD N L+ ++ K++D
Sbjct: 99 LDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVAD 156
Query: 264 FGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
FGL++ GD + APE + + +SDV++FGV+L EI T
Sbjct: 157 FGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 92/179 (51%), Gaps = 14/179 (7%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV 203
V A KV D S + +++ E+ L HPN+VKL+ + + ++ EF A G+V
Sbjct: 36 VLAAAKVIDT-KSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV 94
Query: 204 ENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
+ + ++ PL S + L +LH+ + +I+RD K NIL D + KL+D
Sbjct: 95 DAVML-ELERPLTESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLAD 151
Query: 264 FGLAKDGPEGDKSHVSTR--IMGTYGYAAPEYIM--TGHLTP---RSDVYSFGVVLLEI 315
FG++ + ++ + R +GT + APE +M T P ++DV+S G+ L+E+
Sbjct: 152 FGVS---AKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 99/232 (42%), Gaps = 9/232 (3%)
Query: 161 REWLAEVIFLGHLSHPNLVKLIGYCCEDEHR--VLIYEFMARGSVENNLFSKVLLPLPWS 218
R++ E+ L L H N+VK G C R LI E++ GS+ + L K +
Sbjct: 74 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHI 132
Query: 219 IRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHV 278
++ KG+ +L K I+RD T NIL++ + K+ DFGL K P+ DK
Sbjct: 133 KLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXX 189
Query: 279 STRIMGT--YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADW 336
+ G + APE + + SDV+SFGVVL E+ T + KS PA +
Sbjct: 190 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEK-SKSPPAEFMRMIGN 248
Query: 337 AXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDI 388
++ P + M+ C N+N RP RD+
Sbjct: 249 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 300
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 92/190 (48%), Gaps = 24/190 (12%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGY----CCEDEHRVLIYEFMARG 201
VAVK+ + E+ EV L + H N+++ IG D LI F +G
Sbjct: 50 VAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKG 107
Query: 202 SVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHE-------AEKPVI-YRDFKTSNILL 253
S+ + L + V+ W+ IA A+GLA+LHE KP I +RD K+ N+LL
Sbjct: 108 SLSDFLKANVV---SWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL 164
Query: 254 DTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLT------PRSDVYS 307
+ A ++DFGLA G + + +GT Y APE ++ G + R D+Y+
Sbjct: 165 KNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE-VLEGAINFQRDAFLRIDMYA 223
Query: 308 FGVVLLEILT 317
G+VL E+ +
Sbjct: 224 MGLVLWELAS 233
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 104/246 (42%), Gaps = 28/246 (11%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VA+K+ D + + + E+ L P + K G +D +I E++ GS +
Sbjct: 35 VAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD 94
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFG 265
L PL + I KGL +LH +K I+RD K +N+LL KL+DFG
Sbjct: 95 LLEPG---PLDETQIATILREILKGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFG 149
Query: 266 LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKS 325
+A G D +GT + APE I ++D++S G+ +E+ G +
Sbjct: 150 VA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
Query: 326 RPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDY--PVKGVHKAAMLAYHCLNHNPKARP 383
P + L P LEG+Y P+K +A CLN P RP
Sbjct: 208 HPMKVLFLIPKNNP-------------PTLEGNYSKPLKEFVEA------CLNKEPSFRP 248
Query: 384 LMRDIV 389
++++
Sbjct: 249 TAKELL 254
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 100/233 (42%), Gaps = 9/233 (3%)
Query: 161 REWLAEVIFLGHLSHPNLVKLIGYCCEDEHR--VLIYEFMARGSVENNLFSKVLLPLPWS 218
R++ E+ L L H N+VK G C R LI E++ GS+ + L K +
Sbjct: 57 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHI 115
Query: 219 IRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHV 278
++ KG+ +L K I+R+ T NIL++ + K+ DFGL K P+ DK +
Sbjct: 116 KLLQYTSQICKGMEYL--GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQ-DKEYY 172
Query: 279 STRIMGT--YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADW 336
+ G + APE + + SDV+SFGVVL E+ T + KS PA +
Sbjct: 173 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEK-SKSPPAEFMRMIGN 231
Query: 337 AXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIV 389
++ P + M+ C N+N RP RD+
Sbjct: 232 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA 284
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 104/246 (42%), Gaps = 28/246 (11%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VA+K+ D + + + E+ L P + K G +D +I E++ GS +
Sbjct: 35 VAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD 94
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFG 265
L PL + I KGL +LH +K I+RD K +N+LL KL+DFG
Sbjct: 95 LLEPG---PLDETQIATILREILKGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFG 149
Query: 266 LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKS 325
+A G D +GT + APE I ++D++S G+ +E+ G +
Sbjct: 150 VA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
Query: 326 RPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDY--PVKGVHKAAMLAYHCLNHNPKARP 383
P + L P LEG+Y P+K +A CLN P RP
Sbjct: 208 HPMKVLFLIPKNNP-------------PTLEGNYSKPLKEFVEA------CLNKEPSFRP 248
Query: 384 LMRDIV 389
++++
Sbjct: 249 TAKELL 254
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 99/232 (42%), Gaps = 9/232 (3%)
Query: 161 REWLAEVIFLGHLSHPNLVKLIGYCCEDEHR--VLIYEFMARGSVENNLFSKVLLPLPWS 218
R++ E+ L L H N+VK G C R LI E++ GS+ + L K +
Sbjct: 74 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHI 132
Query: 219 IRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHV 278
++ KG+ +L K I+RD T NIL++ + K+ DFGL K P+ DK
Sbjct: 133 KLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXX 189
Query: 279 STRIMGT--YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADW 336
+ G + APE + + SDV+SFGVVL E+ T + KS PA +
Sbjct: 190 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEK-SKSPPAEFMRMIGN 248
Query: 337 AXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDI 388
++ P + M+ C N+N RP RD+
Sbjct: 249 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 300
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 9/171 (5%)
Query: 161 REWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN--NLFSKVLLPLPWS 218
+E + E+ + P++VK G ++ ++ E+ GSV + L +K L +
Sbjct: 69 QEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIA 128
Query: 219 IRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHV 278
++ KGL +LH K I+RD K NILL+T+ +AKL+DFG+A G D
Sbjct: 129 TILQ---STLKGLEYLHFMRK--IHRDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAK 181
Query: 279 STRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAR 329
++GT + APE I +D++S G+ +E+ G+ P R
Sbjct: 182 RNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR 232
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 9/233 (3%)
Query: 161 REWLAEVIFLGHLSHPNLVKLIGYCCEDEHR--VLIYEFMARGSVENNLFSKVLLPLPWS 218
R++ E+ L L H N+VK G C R LI E++ GS+ + L +
Sbjct: 59 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIK 118
Query: 219 IRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHV 278
+ ++ KG+ +L K I+RD T NIL++ + K+ DFGL K P+ DK
Sbjct: 119 L-LQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXX 174
Query: 279 STRIMGT--YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADW 336
+ G + APE + + SDV+SFGVVL E+ T + KS PA +
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEK-SKSPPAEFMRMIGN 233
Query: 337 AXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIV 389
++ P + M+ C N+N RP RD+
Sbjct: 234 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA 286
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 3/156 (1%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRM 221
++L E L SHPN+V+LIG C + + ++ E + G L ++ L +
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG-ARLRVKTLL 216
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
++ AA G+ +L K I+RD N L+ K+SDFG++++ +G +
Sbjct: 217 QMVGDAAAGMEYLE--SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGL 274
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+ APE + G + SDV+SFG++L E +
Sbjct: 275 RQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 7/156 (4%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV L H N++ +GY +D + ++ ++ S+ +L + + + + IA
Sbjct: 82 EVAVLRKTRHVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETKFQMFQL-IDIAR 139
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A+G+ +LH K +I+RD K++NI L K+ DFGLA S + G+
Sbjct: 140 QTAQGMDYLHA--KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGS 197
Query: 286 YGYAAPEYIMTGHLTP---RSDVYSFGVVLLEILTG 318
+ APE I P +SDVYS+G+VL E++TG
Sbjct: 198 VLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 11/177 (6%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV 203
V A KV D S + +++ E+ L HPN+VKL+ + + ++ EF A G+V
Sbjct: 63 VLAAAKVIDT-KSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV 121
Query: 204 ENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
+ + ++ PL S + L +LH+ +I+RD K NIL D + KL+D
Sbjct: 122 DAVML-ELERPLTESQIQVVCKQTLDALNYLHD--NKIIHRDLKAGNILFTLDGDIKLAD 178
Query: 264 FGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIM--TGHLTP---RSDVYSFGVVLLEI 315
FG++ + S +GT + APE +M T P ++DV+S G+ L+E+
Sbjct: 179 FGVSAKNTRTIQRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 81/157 (51%), Gaps = 6/157 (3%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
+ E+ L L+HPN+VKL+ + L++E + + ++ + + L +P +
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSY 107
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
F +GLAF H V++RD K N+L++T+ KL+DFGLA+ G T +
Sbjct: 108 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEV 163
Query: 284 GTYGYAAPEYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
T Y APE ++ + + D++S G + E++T R
Sbjct: 164 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 11/177 (6%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV 203
V A KV D S + +++ E+ L HPN+VKL+ + + ++ EF A G+V
Sbjct: 63 VLAAAKVIDT-KSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV 121
Query: 204 ENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
+ + ++ PL S + L +LH+ +I+RD K NIL D + KL+D
Sbjct: 122 DAVML-ELERPLTESQIQVVCKQTLDALNYLHD--NKIIHRDLKAGNILFTLDGDIKLAD 178
Query: 264 FGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIM--TGHLTP---RSDVYSFGVVLLEI 315
FG++ + S +GT + APE +M T P ++DV+S G+ L+E+
Sbjct: 179 FGVSAKNTRXIQRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 27/206 (13%)
Query: 138 REGLQPVPVAVKVHDGDN-SYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYE 196
R L VAVK+ D + ++ EV + L+HPN+VKL ++ L+ E
Sbjct: 34 RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVME 93
Query: 197 FMARGSVENNLFSKVLLPLPWSIRMKIAFGAAK------GLAFLHEAEKPVIYRDFKTSN 250
+ + G V + L + RMK AK + + H+ K +++RD K N
Sbjct: 94 YASGGEVFDYLVAHG--------RMKEKEARAKFRQIVSAVQYCHQ--KFIVHRDLKAEN 143
Query: 251 ILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIM-TGHLTPRSDVYSFG 309
+LLD D N K++DFG + + G+K G+ YAAPE + P DV+S G
Sbjct: 144 LLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 310 VVLLEILTGRKSLDKSRPAREQNLAD 335
V+L +++G S P QNL +
Sbjct: 201 VILYTLVSG------SLPFDGQNLKE 220
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 27/206 (13%)
Query: 138 REGLQPVPVAVKVHDGDN-SYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYE 196
R L VAVK+ D + ++ EV + L+HPN+VKL ++ L+ E
Sbjct: 34 RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVME 93
Query: 197 FMARGSVENNLFSKVLLPLPWSIRMKIAFGAAK------GLAFLHEAEKPVIYRDFKTSN 250
+ + G V + L + RMK AK + + H+ K +++RD K N
Sbjct: 94 YASGGEVFDYLVAHG--------RMKEKEARAKFRQIVSAVQYCHQ--KFIVHRDLKAEN 143
Query: 251 ILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIM-TGHLTPRSDVYSFG 309
+LLD D N K++DFG + + G+K G+ YAAPE + P DV+S G
Sbjct: 144 LLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 310 VVLLEILTGRKSLDKSRPAREQNLAD 335
V+L +++G S P QNL +
Sbjct: 201 VILYTLVSG------SLPFDGQNLKE 220
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 5/147 (3%)
Query: 172 HLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGL 231
LSH N+V +I ED+ L+ E++ ++ + S P S+ I F
Sbjct: 67 QLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG----PLSVDTAINFTNQILD 122
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAP 291
H + +++RD K NIL+D++ K+ DFG+AK E + + ++GT Y +P
Sbjct: 123 GIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTVQYFSP 181
Query: 292 EYIMTGHLTPRSDVYSFGVVLLEILTG 318
E +D+YS G+VL E+L G
Sbjct: 182 EQAKGEATDECTDIYSIGIVLYEMLVG 208
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 20/164 (12%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS------KVLLPL 215
E LAE + L +P +V++IG CE E +L+ E G + L K ++ L
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 132
Query: 216 PWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDK 275
+ M G+ +L E+ ++RD N+LL T + AK+SDFGL+K D+
Sbjct: 133 VHQVSM--------GMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADE 181
Query: 276 SHVSTRIMGTY--GYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
++ + G + + APE I + +SDV+SFGV++ E +
Sbjct: 182 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 20/164 (12%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS------KVLLPL 215
E LAE + L +P +V++IG CE E +L+ E G + L K ++ L
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 132
Query: 216 PWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDK 275
+ M G+ +L E+ ++RD N+LL T + AK+SDFGL+K D+
Sbjct: 133 VHQVSM--------GMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADE 181
Query: 276 SHVSTRIMGTY--GYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
++ + G + + APE I + +SDV+SFGV++ E +
Sbjct: 182 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 3/156 (1%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRM 221
E+L E + + HPNLV+L+G C + +I EFM G++ + L + + +
Sbjct: 262 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 321
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
+A + + +L +K I+R+ N L+ ++ K++DFGL++ GD
Sbjct: 322 YMATQISSAMEYLE--KKNFIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAG 378
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+ APE + + +SDV++FGV+L EI T
Sbjct: 379 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 20/164 (12%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS------KVLLPL 215
E LAE + L +P +V++IG CE E +L+ E G + L K ++ L
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 130
Query: 216 PWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDK 275
+ M G+ +L E+ ++RD N+LL T + AK+SDFGL+K D+
Sbjct: 131 VHQVSM--------GMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADE 179
Query: 276 SHVSTRIMGTY--GYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
++ + G + + APE I + +SDV+SFGV++ E +
Sbjct: 180 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 20/164 (12%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS------KVLLPL 215
E LAE + L +P +V++IG CE E +L+ E G + L K ++ L
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 122
Query: 216 PWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDK 275
+ M G+ +L E+ ++RD N+LL T + AK+SDFGL+K D+
Sbjct: 123 VHQVSM--------GMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADE 171
Query: 276 SHVSTRIMGTY--GYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
++ + G + + APE I + +SDV+SFGV++ E +
Sbjct: 172 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 20/164 (12%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS------KVLLPL 215
E LAE + L +P +V++IG CE E +L+ E G + L K ++ L
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 474
Query: 216 PWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDK 275
+ M G+ +L E+ ++RD N+LL T + AK+SDFGL+K D+
Sbjct: 475 VHQVSM--------GMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADE 523
Query: 276 SHVSTRIMGTY--GYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
++ + G + + APE I + +SDV+SFGV++ E +
Sbjct: 524 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 47/261 (18%)
Query: 168 IFLGHLSHPNLVKLIGYCCEDEHRVL-IYEFMARGSVENNLFSKVLLPLP----WSIRMK 222
+F +HP LV L C + E R+ + E++ G + ++ + LP +S +
Sbjct: 73 VFEQASNHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS 131
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPE-GDKSHVSTR 281
+A L +LHE + +IYRD K N+LLD++ + KL+D+G+ K+G GD ++
Sbjct: 132 LA------LNYLHE--RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSX 180
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLD--KSRPAREQNLADWAXX 339
GT Y APE + D ++ GV++ E++ GR D S +QN D+
Sbjct: 181 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 240
Query: 340 XXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKAR---------------PL 384
I++ ++ P KAA + LN +PK R P
Sbjct: 241 V---------ILEKQIR--IPRSMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPF 289
Query: 385 MRDI-VDSLEPLQVLPDEAPT 404
R++ D +E QV+P P
Sbjct: 290 FRNVDWDMMEQKQVVPPFKPN 310
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 27/206 (13%)
Query: 138 REGLQPVPVAVKVHDGDN-SYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYE 196
R L VAVK+ D + ++ EV + L+HPN+VKL ++ L+ E
Sbjct: 35 RHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVME 94
Query: 197 FMARGSVENNLFSKVLLPLPWSIRMKIAFGAAK------GLAFLHEAEKPVIYRDFKTSN 250
+ + G V + L + RMK AK + + H+ K +++RD K N
Sbjct: 95 YASGGEVFDYLVAHG--------RMKEKEARAKFRQIVSAVQYCHQ--KYIVHRDLKAEN 144
Query: 251 ILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIM-TGHLTPRSDVYSFG 309
+LLD D N K++DFG + + G+K G+ YAAPE + P DV+S G
Sbjct: 145 LLLDGDMNIKIADFGFSNEFTVGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLG 201
Query: 310 VVLLEILTGRKSLDKSRPAREQNLAD 335
V+L +++G S P QNL +
Sbjct: 202 VILYTLVSG------SLPFDGQNLKE 221
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 20/164 (12%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS------KVLLPL 215
E LAE + L +P +V++IG CE E +L+ E G + L K ++ L
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 116
Query: 216 PWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDK 275
+ M G+ +L E+ ++RD N+LL T + AK+SDFGL+K D+
Sbjct: 117 VHQVSM--------GMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADE 165
Query: 276 SHVSTRIMGTY--GYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
++ + G + + APE I + +SDV+SFGV++ E +
Sbjct: 166 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 95/206 (46%), Gaps = 27/206 (13%)
Query: 138 REGLQPVPVAVKVHDGDN-SYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYE 196
R L VAVK+ D + ++ EV + L+HPN+VKL ++ L+ E
Sbjct: 34 RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVME 93
Query: 197 FMARGSVENNLFSKVLLPLPWSIRMKIAFGAAK------GLAFLHEAEKPVIYRDFKTSN 250
+ + G V + L + RMK AK + + H+ K +++RD K N
Sbjct: 94 YASGGEVFDYLVAHG--------RMKEKEARAKFRQIVSAVQYCHQ--KFIVHRDLKAEN 143
Query: 251 ILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIM-TGHLTPRSDVYSFG 309
+LLD D N K++DFG + + G+K G YAAPE + P DV+S G
Sbjct: 144 LLLDADMNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 310 VVLLEILTGRKSLDKSRPAREQNLAD 335
V+L +++G S P QNL +
Sbjct: 201 VILYTLVSG------SLPFDGQNLKE 220
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 3/156 (1%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRM 221
E+L E + + HPNLV+L+G C + +I EFM G++ + L + + +
Sbjct: 301 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 360
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
+A + + +L +K I+R+ N L+ ++ K++DFGL++ GD
Sbjct: 361 YMATQISSAMEYLE--KKNFIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAG 417
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+ APE + + +SDV++FGV+L EI T
Sbjct: 418 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 20/164 (12%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS------KVLLPL 215
E LAE + L +P +V++IG CE E +L+ E G + L K ++ L
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 475
Query: 216 PWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDK 275
+ M G+ +L E+ ++RD N+LL T + AK+SDFGL+K D+
Sbjct: 476 VHQVSM--------GMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADE 524
Query: 276 SHVSTRIMGTY--GYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
++ + G + + APE I + +SDV+SFGV++ E +
Sbjct: 525 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 20/164 (12%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS------KVLLPL 215
E LAE + L +P +V++IG CE E +L+ E G + L K ++ L
Sbjct: 54 ELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 112
Query: 216 PWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDK 275
+ M G+ +L E+ ++RD N+LL T + AK+SDFGL+K D+
Sbjct: 113 VHQVSM--------GMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADE 161
Query: 276 SHVSTRIMGTY--GYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
++ + G + + APE I + +SDV+SFGV++ E +
Sbjct: 162 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 20/164 (12%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS------KVLLPL 215
E LAE + L +P +V++IG CE E +L+ E G + L K ++ L
Sbjct: 52 ELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 110
Query: 216 PWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDK 275
+ M G+ +L E+ ++RD N+LL T + AK+SDFGL+K D+
Sbjct: 111 VHQVSM--------GMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADE 159
Query: 276 SHVSTRIMGTY--GYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
++ + G + + APE I + +SDV+SFGV++ E +
Sbjct: 160 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 47/261 (18%)
Query: 168 IFLGHLSHPNLVKLIGYCCEDEHRVL-IYEFMARGSVENNLFSKVLLPLP----WSIRMK 222
+F +HP LV L C + E R+ + E++ G + ++ + LP +S +
Sbjct: 105 VFEQASNHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS 163
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPE-GDKSHVSTR 281
+A L +LHE + +IYRD K N+LLD++ + KL+D+G+ K+G GD ++
Sbjct: 164 LA------LNYLHE--RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTST 212
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLD--KSRPAREQNLADWAXX 339
GT Y APE + D ++ GV++ E++ GR D S +QN D+
Sbjct: 213 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 272
Query: 340 XXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKAR---------------PL 384
I++ ++ P KAA + LN +PK R P
Sbjct: 273 V---------ILEKQIR--IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPF 321
Query: 385 MRDI-VDSLEPLQVLPDEAPT 404
R++ D +E QV+P P
Sbjct: 322 FRNVDWDMMEQKQVVPPFKPN 342
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSV 203
V A KV D S + +++ E+ L HPN+VKL+ + + ++ EF A G+V
Sbjct: 63 VLAAAKVIDT-KSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV 121
Query: 204 ENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
+ + ++ PL S + L +LH+ +I+RD K NIL D + KL+D
Sbjct: 122 DAVML-ELERPLTESQIQVVCKQTLDALNYLHD--NKIIHRDLKAGNILFTLDGDIKLAD 178
Query: 264 FGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIM--TGHLTP---RSDVYSFGVVLLEI 315
FG++ + +GT + APE +M T P ++DV+S G+ L+E+
Sbjct: 179 FGVSAKNTRXIQRR--DXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 3/156 (1%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRM 221
E+L E + + HPNLV+L+G C + +I EFM G++ + L + + +
Sbjct: 259 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 318
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
+A + + +L +K I+R+ N L+ ++ K++DFGL++ GD
Sbjct: 319 YMATQISSAMEYLE--KKNFIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAG 375
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+ APE + + +SDV++FGV+L EI T
Sbjct: 376 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 20/211 (9%)
Query: 117 DRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHP 176
+R+L VY+G + E + VAVK D + ++++E + + +L HP
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKIN---VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHP 69
Query: 177 NLVKLIGYCCEDEHRVLIYEFMARGS----VENNLFS-KVLLPLPWSIRMKIAFGAAKGL 231
++VKLIG E+E +I E G +E N S KVL + +S+++ K +
Sbjct: 70 HIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQI------CKAM 122
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS-TRIMGTYGYAA 290
A+L ++RD NIL+ + KL DFGL++ + D S TR+ + +
Sbjct: 123 AYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMS 178
Query: 291 PEYIMTGHLTPRSDVYSFGVVLLEILTGRKS 321
PE I T SDV+ F V + EIL+ K
Sbjct: 179 PESINFRRFTTASDVWMFAVCMWEILSFGKQ 209
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 20/207 (9%)
Query: 117 DRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHP 176
+R+L VY+G + E + VAVK D + ++++E + + +L HP
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKIN---VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHP 85
Query: 177 NLVKLIGYCCEDEHRVLIYEFMARGS----VENNLFS-KVLLPLPWSIRMKIAFGAAKGL 231
++VKLIG E+E +I E G +E N S KVL + +S+++ K +
Sbjct: 86 HIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQI------CKAM 138
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS-TRIMGTYGYAA 290
A+L ++RD NIL+ + KL DFGL++ + D S TR+ + +
Sbjct: 139 AYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMS 194
Query: 291 PEYIMTGHLTPRSDVYSFGVVLLEILT 317
PE I T SDV+ F V + EIL+
Sbjct: 195 PESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 112/251 (44%), Gaps = 39/251 (15%)
Query: 174 SHPNLVKLIGYCCEDEHRVL-IYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLA 232
+HP LV L C + E R+ + E++ G + ++ + LP + + A LA
Sbjct: 64 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR----FYSAEISLA 118
Query: 233 FLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPE-GDKSHVSTRIMGTYGYAAP 291
+ E+ +IYRD K N+LLD++ + KL+D+G+ K+G GD ++ GT Y AP
Sbjct: 119 LNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYIAP 175
Query: 292 EYIMTGHLTPRSDVYSFGVVLLEILTGRKSLD--KSRPAREQNLADWAXXXXXXXXXXXN 349
E + D ++ GV++ E++ GR D S +QN D+
Sbjct: 176 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV--------- 226
Query: 350 IIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKAR---------------PLMRDI-VDSLE 393
I++ ++ P KAA + LN +PK R P R++ D +E
Sbjct: 227 ILEKQIR--IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMME 284
Query: 394 PLQVLPDEAPT 404
QV+P P
Sbjct: 285 QKQVVPPFKPN 295
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 27/206 (13%)
Query: 138 REGLQPVPVAVKVHDGDN-SYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYE 196
R L VAV++ D + ++ EV + L+HPN+VKL ++ L+ E
Sbjct: 34 RHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVME 93
Query: 197 FMARGSVENNLFSKVLLPLPWSIRMKIAFGAAK------GLAFLHEAEKPVIYRDFKTSN 250
+ + G V + L + RMK AK + + H+ K +++RD K N
Sbjct: 94 YASGGEVFDYLVAHG--------RMKEKEARAKFRQIVSAVQYCHQ--KFIVHRDLKAEN 143
Query: 251 ILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIM-TGHLTPRSDVYSFG 309
+LLD D N K++DFG + + G+K G+ YAAPE + P DV+S G
Sbjct: 144 LLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 310 VVLLEILTGRKSLDKSRPAREQNLAD 335
V+L +++G S P QNL +
Sbjct: 201 VILYTLVSG------SLPFDGQNLKE 220
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 84/196 (42%), Gaps = 24/196 (12%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHL-SHPNLVKLIGYCCEDEHRVLIYEFMARGS 202
+ VAVK+ ++E+ + L SH N+V L+G C LI+E+ G
Sbjct: 76 IQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGD 135
Query: 203 VENNLFSKV---------------------LLPLPWSIRMKIAFGAAKGLAFLHEAEKPV 241
+ N L SK L L + + A+ AKG+ FL K
Sbjct: 136 LLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF--KSC 193
Query: 242 IYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTP 301
++RD N+L+ K+ DFGLA+D V + APE + G T
Sbjct: 194 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTI 253
Query: 302 RSDVYSFGVVLLEILT 317
+SDV+S+G++L EI +
Sbjct: 254 KSDVWSYGILLWEIFS 269
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 27/206 (13%)
Query: 138 REGLQPVPVAVKVHDGDN-SYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYE 196
R L VAV++ D + ++ EV + L+HPN+VKL ++ L+ E
Sbjct: 34 RHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVME 93
Query: 197 FMARGSVENNLFSKVLLPLPWSIRMKIAFGAAK------GLAFLHEAEKPVIYRDFKTSN 250
+ + G V + L + RMK AK + + H+ K +++RD K N
Sbjct: 94 YASGGEVFDYLVAHG--------RMKEKEARAKFRQIVSAVQYCHQ--KFIVHRDLKAEN 143
Query: 251 ILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIM-TGHLTPRSDVYSFG 309
+LLD D N K++DFG + + G+K G+ YAAPE + P DV+S G
Sbjct: 144 LLLDADMNIKIADFGFSNEFTFGNK---LDEFCGSPPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 310 VVLLEILTGRKSLDKSRPAREQNLAD 335
V+L +++G S P QNL +
Sbjct: 201 VILYTLVSG------SLPFDGQNLKE 220
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 20/207 (9%)
Query: 117 DRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHP 176
+R+L VY+G + E + VAVK D + ++++E + + +L HP
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKIN---VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHP 73
Query: 177 NLVKLIGYCCEDEHRVLIYEFMARGS----VENNLFS-KVLLPLPWSIRMKIAFGAAKGL 231
++VKLIG E+E +I E G +E N S KVL + +S+++ K +
Sbjct: 74 HIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQI------CKAM 126
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS-TRIMGTYGYAA 290
A+L ++RD NIL+ + KL DFGL++ + D S TR+ + +
Sbjct: 127 AYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMS 182
Query: 291 PEYIMTGHLTPRSDVYSFGVVLLEILT 317
PE I T SDV+ F V + EIL+
Sbjct: 183 PESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 112/251 (44%), Gaps = 39/251 (15%)
Query: 174 SHPNLVKLIGYCCEDEHRVL-IYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLA 232
+HP LV L C + E R+ + E++ G + ++ + LP + + A LA
Sbjct: 68 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR----FYSAEISLA 122
Query: 233 FLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPE-GDKSHVSTRIMGTYGYAAP 291
+ E+ +IYRD K N+LLD++ + KL+D+G+ K+G GD ++ GT Y AP
Sbjct: 123 LNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYIAP 179
Query: 292 EYIMTGHLTPRSDVYSFGVVLLEILTGRKSLD--KSRPAREQNLADWAXXXXXXXXXXXN 349
E + D ++ GV++ E++ GR D S +QN D+
Sbjct: 180 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV--------- 230
Query: 350 IIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKAR---------------PLMRDI-VDSLE 393
I++ ++ P KAA + LN +PK R P R++ D +E
Sbjct: 231 ILEKQIR--IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMME 288
Query: 394 PLQVLPDEAPT 404
QV+P P
Sbjct: 289 QKQVVPPFKPN 299
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 27/206 (13%)
Query: 138 REGLQPVPVAVKVHDGDN-SYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYE 196
R L VAVK+ D + ++ EV + L+HPN+VKL ++ L+ E
Sbjct: 27 RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVME 86
Query: 197 FMARGSVENNLFSKVLLPLPWSIRMKIAFGAAK------GLAFLHEAEKPVIYRDFKTSN 250
+ + G V + L + W MK AK + + H+ K +++RD K N
Sbjct: 87 YASGGEVFDYLVAH-----GW---MKEKEARAKFRQIVSAVQYCHQ--KFIVHRDLKAEN 136
Query: 251 ILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIM-TGHLTPRSDVYSFG 309
+LLD D N K++DFG + + G+K G+ YAAPE + P DV+S G
Sbjct: 137 LLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLG 193
Query: 310 VVLLEILTGRKSLDKSRPAREQNLAD 335
V+L +++G S P QNL +
Sbjct: 194 VILYTLVSG------SLPFDGQNLKE 213
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 21/206 (10%)
Query: 128 VYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCE 187
VYKG + G Q VA+K E+ E + L HPN+V L+G +
Sbjct: 42 VYKGHLFGP-APGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK 100
Query: 188 DEHRVLIYEFMARG----------------SVENNLFSKVLLPLPWSIRMKIAFGAAKGL 231
D+ +I+ + + G S +++ K L P + + A G+
Sbjct: 101 DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAA--GM 158
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAP 291
+L + V+++D T N+L+ N K+SD GL ++ D + + + AP
Sbjct: 159 EYL--SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAP 216
Query: 292 EYIMTGHLTPRSDVYSFGVVLLEILT 317
E IM G + SD++S+GVVL E+ +
Sbjct: 217 EAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 20/164 (12%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS------KVLLPL 215
E LAE + L +P +V++IG CE E +L+ E G + L K ++ L
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 116
Query: 216 PWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDK 275
+ M G+ +L E+ ++RD N+LL T + AK+SDFGL+K D+
Sbjct: 117 VHQVSM--------GMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADE 165
Query: 276 SHVSTRIMGTY--GYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+ + G + + APE I + +SDV+SFGV++ E +
Sbjct: 166 NXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 31/200 (15%)
Query: 138 REGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSH-PNLVKLIGYCCEDEHRVLIY- 195
++GL+ + A+K S HR++ E+ L L H PN++ L+G C EHR +Y
Sbjct: 38 KDGLR-MDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC---EHRGYLYL 93
Query: 196 --EFMARGSVENNLF-SKVLLPLP-----------WSIRMKIAFGA--AKGLAFLHEAEK 239
E+ G++ + L S+VL P S + + F A A+G+ +L ++K
Sbjct: 94 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL--SQK 151
Query: 240 PVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTY--GYAAPEYIMTG 297
I+RD NIL+ +Y AK++DFGL++ G + +V + MG + A E +
Sbjct: 152 QFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVK-KTMGRLPVRWMAIESLNYS 206
Query: 298 HLTPRSDVYSFGVVLLEILT 317
T SDV+S+GV+L EI++
Sbjct: 207 VYTTNSDVWSYGVLLWEIVS 226
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 31/200 (15%)
Query: 138 REGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSH-PNLVKLIGYCCEDEHRVLIY- 195
++GL+ + A+K S HR++ E+ L L H PN++ L+G C EHR +Y
Sbjct: 48 KDGLR-MDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC---EHRGYLYL 103
Query: 196 --EFMARGSVENNLF-SKVLLPLP-----------WSIRMKIAFGA--AKGLAFLHEAEK 239
E+ G++ + L S+VL P S + + F A A+G+ +L ++K
Sbjct: 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL--SQK 161
Query: 240 PVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTY--GYAAPEYIMTG 297
I+RD NIL+ +Y AK++DFGL++ G + +V + MG + A E +
Sbjct: 162 QFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVK-KTMGRLPVRWMAIESLNYS 216
Query: 298 HLTPRSDVYSFGVVLLEILT 317
T SDV+S+GV+L EI++
Sbjct: 217 VYTTNSDVWSYGVLLWEIVS 236
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKV--LLPLPWSIRM 221
L E + L H LV+L E+ ++I E+M++GS+ + L ++ L LP + M
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
A A G+A++ ++RD + +NIL+ + K++DFGLA+ E ++
Sbjct: 120 --AAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEXTARQG 174
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+ APE + G T +SDV+SFG++L E+ T
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
+ E+ L L+HPN+VKL+ + L++E + + ++ + + L +P +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSY 111
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
F +GLAF H V++RD K N+L++T+ KL+DFGLA+ +++ +
Sbjct: 112 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 284 GTYGYAAPEYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
T Y APE ++ + + D++S G + E++T R
Sbjct: 169 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 21/206 (10%)
Query: 128 VYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCE 187
VYKG + G Q VA+K E+ E + L HPN+V L+G +
Sbjct: 25 VYKGHLFGP-APGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK 83
Query: 188 DEHRVLIYEFMARG----------------SVENNLFSKVLLPLPWSIRMKIAFGAAKGL 231
D+ +I+ + + G S +++ K L P + + A G+
Sbjct: 84 DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAA--GM 141
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAP 291
+L + V+++D T N+L+ N K+SD GL ++ D + + + AP
Sbjct: 142 EYL--SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAP 199
Query: 292 EYIMTGHLTPRSDVYSFGVVLLEILT 317
E IM G + SD++S+GVVL E+ +
Sbjct: 200 EAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 11/168 (6%)
Query: 164 LAEVIFLGHLSHPNLVK-LIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMK 222
+ E++ + +PN+V L Y DE V + E++A GS+ + + + +
Sbjct: 65 INEILVMRENKNPNIVNYLDSYLVGDELWV-VMEYLAGGSLTDVVTETCMDEGQIA---A 120
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGL-AKDGPEGDKSHVSTR 281
+ + L FLH + VI+RD K+ NILL D + KL+DFG A+ PE K +
Sbjct: 121 VCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSE 175
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAR 329
++GT + APE + P+ D++S G++ +E++ G P R
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR 223
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 8/153 (5%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSRFDEQRTATYIT 119
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL ++ K++DFG + P + T + GT
Sbjct: 120 ELANALSYCH--SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGT 173
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
Y PE I + D++S GV+ E L G
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 27/206 (13%)
Query: 138 REGLQPVPVAVKVHDGDN-SYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYE 196
R L VA+K+ D + ++ EV + L+HPN+VKL ++ LI E
Sbjct: 32 RHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIME 91
Query: 197 FMARGSVENNLFSKVLLPLPWSIRMKIAFGAAK------GLAFLHEAEKPVIYRDFKTSN 250
+ + G V + L + RMK +K + + H+ K +++RD K N
Sbjct: 92 YASGGEVFDYLVAHG--------RMKEKEARSKFRQIVSAVQYCHQ--KRIVHRDLKAEN 141
Query: 251 ILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIM-TGHLTPRSDVYSFG 309
+LLD D N K++DFG + + G K G+ YAAPE + P DV+S G
Sbjct: 142 LLLDADMNIKIADFGFSNEFTVGGKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLG 198
Query: 310 VVLLEILTGRKSLDKSRPAREQNLAD 335
V+L +++G S P QNL +
Sbjct: 199 VILYTLVSG------SLPFDGQNLKE 218
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 11/168 (6%)
Query: 164 LAEVIFLGHLSHPNLVK-LIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMK 222
+ E++ + +PN+V L Y DE V + E++A GS+ + + + +
Sbjct: 65 INEILVMRENKNPNIVNYLDSYLVGDELWV-VMEYLAGGSLTDVVTETCMDEGQIA---A 120
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGL-AKDGPEGDKSHVSTR 281
+ + L FLH + VI+RD K+ NILL D + KL+DFG A+ PE K +
Sbjct: 121 VCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RST 175
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAR 329
++GT + APE + P+ D++S G++ +E++ G P R
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR 223
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKV--LLPLPWSIRM 221
L E + L H LV+L E+ ++I E+M++GS+ + L ++ L LP + M
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
A A G+A++ ++RD + +NIL+ + K++DFGLA+ E ++
Sbjct: 120 --AAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQG 174
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+ APE + G T +SDV+SFG++L E+ T
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 16/214 (7%)
Query: 111 TANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFL 170
++ F+Q L VYKG V VA+K D+ + E+ +
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGL------NKTTGVYVALKEVKLDSEEGTPSTAIREISLM 57
Query: 171 GHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIA----FG 226
L H N+V+L + L++EFM ++ + S+ + P + + + +
Sbjct: 58 KELKHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQ 116
Query: 227 AAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTY 286
+GLAF HE + +++RD K N+L++ KL DFGLA+ G + + + T
Sbjct: 117 LLQGLAFCHENK--ILHRDLKPQNLLINKRGQLKLGDFGLAR--AFGIPVNTFSSEVVTL 172
Query: 287 GYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGR 319
Y AP+ +M S D++S G +L E++TG+
Sbjct: 173 WYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 102/246 (41%), Gaps = 28/246 (11%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VA+K+ D + + + E+ L P + + G + +I E++ GS +
Sbjct: 47 VAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALD 106
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFG 265
L PL + I KGL +LH K I+RD K +N+LL + KL+DFG
Sbjct: 107 LLKPG---PLEETYIATILREILKGLDYLHSERK--IHRDIKAANVLLSEQGDVKLADFG 161
Query: 266 LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKS 325
+A G D +GT + APE I ++D++S G+ +E+ G
Sbjct: 162 VA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDL 219
Query: 326 RPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDY--PVKGVHKAAMLAYHCLNHNPKARP 383
P R L P LEG + P K +A CLN +P+ RP
Sbjct: 220 HPMRVLFLIPKNSP-------------PTLEGQHSKPFKEFVEA------CLNKDPRFRP 260
Query: 384 LMRDIV 389
++++
Sbjct: 261 TAKELL 266
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 11/168 (6%)
Query: 164 LAEVIFLGHLSHPNLVK-LIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMK 222
+ E++ + +PN+V L Y DE V + E++A GS+ + + + +
Sbjct: 65 INEILVMRENKNPNIVNYLDSYLVGDELWV-VMEYLAGGSLTDVVTETCMDEGQIA---A 120
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGL-AKDGPEGDKSHVSTR 281
+ + L FLH + VI+RD K+ NILL D + KL+DFG A+ PE K +
Sbjct: 121 VCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSX 175
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAR 329
++GT + APE + P+ D++S G++ +E++ G P R
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR 223
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 138 REGLQPVPVAVKVHDGDN-SYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYE 196
R L VA+K+ D + ++ EV + L+HPN+VKL ++ LI E
Sbjct: 35 RHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIME 94
Query: 197 FMARGSVENNLFSKVLLPLPWSIRMKIAFGAAK------GLAFLHEAEKPVIYRDFKTSN 250
+ + G V + L + RMK +K + + H+ K +++RD K N
Sbjct: 95 YASGGEVFDYLVAHG--------RMKEKEARSKFRQIVSAVQYCHQ--KRIVHRDLKAEN 144
Query: 251 ILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIM-TGHLTPRSDVYSFG 309
+LLD D N K++DFG + + G K G YAAPE + P DV+S G
Sbjct: 145 LLLDADMNIKIADFGFSNEFTVGGKLDA---FCGAPPYAAPELFQGKKYDGPEVDVWSLG 201
Query: 310 VVLLEILTGRKSLDKSRPAREQNLAD 335
V+L +++G S P QNL +
Sbjct: 202 VILYTLVSG------SLPFDGQNLKE 221
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 11/168 (6%)
Query: 164 LAEVIFLGHLSHPNLVK-LIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMK 222
+ E++ + +PN+V L Y DE V + E++A GS+ + + + +
Sbjct: 66 INEILVMRENKNPNIVNYLDSYLVGDELWV-VMEYLAGGSLTDVVTETCMDEGQIA---A 121
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGL-AKDGPEGDKSHVSTR 281
+ + L FLH + VI+RD K+ NILL D + KL+DFG A+ PE K +
Sbjct: 122 VCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSX 176
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAR 329
++GT + APE + P+ D++S G++ +E++ G P R
Sbjct: 177 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR 224
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKV--LLPLPWSIRM 221
L E + L H LV+L E E ++ E+M++GS+ + L + L LP + M
Sbjct: 51 LQEAQVMKKLRHEKLVQLYAVVSE-EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 109
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
A A G+A++ ++RD + +NIL+ + K++DFGLA+ E ++
Sbjct: 110 --AAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEXTARQG 164
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+ APE + G T +SDV+SFG++L E+ T
Sbjct: 165 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 200
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 99/229 (43%), Gaps = 16/229 (6%)
Query: 113 NFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGH--REWLAEVIFL 170
+F+ +L VY+ +E + GL+ VA+K+ D Y+ + EV
Sbjct: 12 DFKVGNLLGKGSFAGVYR---AESIHTGLE---VAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 171 GHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKG 230
L HP++++L Y + + L+ E G + L ++V P + G
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVK-PFSENEARHFMHQIITG 124
Query: 231 LAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAA 290
+ +LH +++RD SN+LL + N K++DFGLA + H + + GT Y +
Sbjct: 125 MLYLHS--HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYIS 180
Query: 291 PEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQN---LADW 336
PE SDV+S G + +L GR D N LAD+
Sbjct: 181 PEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADY 229
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 8/156 (5%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKV--LLPLPWSIRM 221
L E + L H LV+L E E ++ E+M++GS+ + L ++ L LP + M
Sbjct: 52 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 110
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
A A G+A++ ++RD + +NIL+ + K++DFGLA+ E ++
Sbjct: 111 --AAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQG 165
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+ APE + G T +SDV+SFG++L E+ T
Sbjct: 166 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 201
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 8/156 (5%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKV--LLPLPWSIRM 221
L E + L H LV+L E E ++ E+M++GS+ + L ++ L LP + M
Sbjct: 50 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 108
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
A A G+A++ ++RD + +NIL+ + K++DFGLA+ E ++
Sbjct: 109 --AAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQG 163
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+ APE + G T +SDV+SFG++L E+ T
Sbjct: 164 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 199
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 8/156 (5%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKV--LLPLPWSIRM 221
L E + L H LV+L E E ++ E+M++GS+ + L ++ L LP + M
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
A A G+A++ ++RD + +NIL+ + K++DFGLA+ E ++
Sbjct: 120 --AAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQG 174
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+ APE + G T +SDV+SFG++L E+ T
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 5/157 (3%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E + L H LV+L E E ++ E+M +GS+ + L L + +
Sbjct: 52 LEEAQIMKKLKHDKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDM 110
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
A A G+A++ I+RD +++NIL+ K++DFGLA+ E ++
Sbjct: 111 AAQVAAGMAYIERMN--YIHRDLRSANILVGNGLICKIADFGLARL-IEDNEXTARQGAK 167
Query: 284 GTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT-GR 319
+ APE + G T +SDV+SFG++L E++T GR
Sbjct: 168 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGR 204
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 3/156 (1%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRM 221
E+L E + + HPNLV+L+G C + ++ E+M G++ + L + + +
Sbjct: 74 EFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLL 133
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
+A + + +L +K I+RD N L+ ++ K++DFGL++ GD
Sbjct: 134 YMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHVVKVADFGLSRL-MTGDTYTAHAG 190
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+ APE + + +SDV++FGV+L EI T
Sbjct: 191 AKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 8/156 (5%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKV--LLPLPWSIRM 221
L E + L H LV+L E E ++ E+M++GS+ + L ++ L LP + M
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
A A G+A++ ++RD + +NIL+ + K++DFGLA+ E ++
Sbjct: 120 --AAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQG 174
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+ APE + G T +SDV+SFG++L E+ T
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKV--LLPLPWSIRM 221
L E + L H LV+L E E ++ E+M++GS+ + L + L LP + M
Sbjct: 54 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 112
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
A A G+A++ ++RD + +NIL+ + K++DFGLA+ E ++
Sbjct: 113 --AAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQG 167
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+ APE + G T +SDV+SFG++L E+ T
Sbjct: 168 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 203
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 31/200 (15%)
Query: 138 REGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSH-PNLVKLIGYCCEDEHRVLIY- 195
++GL+ + A+K S HR++ E+ L L H PN++ L+G C EHR +Y
Sbjct: 45 KDGLR-MDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC---EHRGYLYL 100
Query: 196 --EFMARGSVENNLF-SKVLLPLP-----------WSIRMKIAFGA--AKGLAFLHEAEK 239
E+ G++ + L S+VL P S + + F A A+G+ +L ++K
Sbjct: 101 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL--SQK 158
Query: 240 PVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTY--GYAAPEYIMTG 297
I+R+ NIL+ +Y AK++DFGL++ G + +V + MG + A E +
Sbjct: 159 QFIHRNLAARNILVGENYVAKIADFGLSR----GQEVYVK-KTMGRLPVRWMAIESLNYS 213
Query: 298 HLTPRSDVYSFGVVLLEILT 317
T SDV+S+GV+L EI++
Sbjct: 214 VYTTNSDVWSYGVLLWEIVS 233
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 14/187 (7%)
Query: 132 FISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHR 191
+ + D+R + V + + G S + ++ + EV FL L HPN ++ G C EH
Sbjct: 32 YFARDVRNS-EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG-CYLREHT 89
Query: 192 VLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNI 251
+ GS ++L PL + GA +GLA+LH +I+RD K NI
Sbjct: 90 AWLVMEYCLGSA-SDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNI 146
Query: 252 LLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMT---GHLTPRSDVYSF 308
LL KL DFG A + +GT + APE I+ G + DV+S
Sbjct: 147 LLSEPGLVKLGDFGSASIMAPANX------FVGTPYWMAPEVILAMDEGQYDGKVDVWSL 200
Query: 309 GVVLLEI 315
G+ +E+
Sbjct: 201 GITCIEL 207
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 22/164 (13%)
Query: 163 WLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKV--LLPLPWSIR 220
+L E + L H LV+L E E ++ E+M++GS+ + L + L LP +
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 284
Query: 221 MKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAK-------DGPEG 273
M A A G+A++ ++RD + +NIL+ + K++DFGLA+ +G
Sbjct: 285 M--AAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340
Query: 274 DKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
K + + APE + G T +SDV+SFG++L E+ T
Sbjct: 341 AKFPIK--------WTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 22/164 (13%)
Query: 163 WLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKV--LLPLPWSIR 220
+L E + L H LV+L E E ++ E+M++GS+ + L + L LP +
Sbjct: 309 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 367
Query: 221 MKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAK-------DGPEG 273
M A A G+A++ ++RD + +NIL+ + K++DFGLA+ +G
Sbjct: 368 M--AAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 423
Query: 274 DKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
K + + APE + G T +SDV+SFG++L E+ T
Sbjct: 424 AKFPIK--------WTAPEAALYGRFTIKSDVWSFGILLTELTT 459
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 22/164 (13%)
Query: 163 WLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKV--LLPLPWSIR 220
+L E + L H LV+L E E ++ E+M++GS+ + L + L LP +
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 284
Query: 221 MKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAK-------DGPEG 273
M A A G+A++ ++RD + +NIL+ + K++DFGLA+ +G
Sbjct: 285 M--AAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340
Query: 274 DKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
K + + APE + G T +SDV+SFG++L E+ T
Sbjct: 341 AKFPIK--------WTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 14/187 (7%)
Query: 132 FISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHR 191
+ + D+R + V + + G S + ++ + EV FL L HPN ++ G C EH
Sbjct: 71 YFARDVRNS-EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG-CYLREHT 128
Query: 192 VLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNI 251
+ GS ++L PL + GA +GLA+LH +I+RD K NI
Sbjct: 129 AWLVMEYCLGSA-SDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNI 185
Query: 252 LLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMT---GHLTPRSDVYSF 308
LL KL DFG A + +GT + APE I+ G + DV+S
Sbjct: 186 LLSEPGLVKLGDFGSASIMAPANX------FVGTPYWMAPEVILAMDEGQYDGKVDVWSL 239
Query: 309 GVVLLEI 315
G+ +E+
Sbjct: 240 GITCIEL 246
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 215 LPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGD 274
+P I KI K L L E K +I+RD K SNILLD N KL DFG++ G D
Sbjct: 122 IPEEILGKITLATVKALNHLKENLK-IIHRDIKPSNILLDRSGNIKLCDFGIS--GQLVD 178
Query: 275 KSHVSTRIMGTYGYAAPEYI-----MTGHLTPRSDVYSFGVVLLEILTGR 319
S TR G Y APE I G+ RSDV+S G+ L E+ TGR
Sbjct: 179 -SIAKTRDAGCRPYMAPERIDPSASRQGY-DVRSDVWSLGITLYELATGR 226
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 22/164 (13%)
Query: 163 WLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKV--LLPLPWSIR 220
+L E + L H LV+L E E ++ E+M++GS+ + L + L LP +
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVD 284
Query: 221 MKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAK-------DGPEG 273
M A A G+A++ ++RD + +NIL+ + K++DFGLA+ +G
Sbjct: 285 M--AAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340
Query: 274 DKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
K + + APE + G T +SDV+SFG++L E+ T
Sbjct: 341 AKFPIK--------WTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 7/158 (4%)
Query: 160 HREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
+R L E+ L LSHPN++ L+ + L+++FM +E + L+ P I
Sbjct: 56 NRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHI 114
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + +GL +LH+ +++RD K +N+LLD + KL+DFGLAK ++++
Sbjct: 115 KAYMLM-TLQGLEYLHQHW--ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXH 171
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEIL 316
+ T Y APE + + D+++ G +L E+L
Sbjct: 172 QVV--TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 84/168 (50%), Gaps = 11/168 (6%)
Query: 164 LAEVIFLGHLSHPNLVK-LIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMK 222
+ E++ + +PN+V L Y DE V + E++A GS+ + + + +
Sbjct: 66 INEILVMRENKNPNIVNYLDSYLVGDELWV-VMEYLAGGSLTDVVTETCMDEGQIA---A 121
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGL-AKDGPEGDKSHVSTR 281
+ + L FLH + VI+R+ K+ NILL D + KL+DFG A+ PE K +
Sbjct: 122 VCRECLQALEFLHSNQ--VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RST 176
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAR 329
++GT + APE + P+ D++S G++ +E++ G P R
Sbjct: 177 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR 224
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV HL HPN+++L GY + LI E+ G+V L + L
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSRFDEQRTATYIT 119
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L++ H K VI+RD K N+LL ++ K++DFG + P + + GT
Sbjct: 120 ELANALSYCH--SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRD----TLCGT 173
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
Y PE I + D++S GV+ E L G
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 81/156 (51%), Gaps = 8/156 (5%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKV--LLPLPWSIRM 221
L E + + H LV+L E E ++ E+M++GS+ + L ++ L LP + M
Sbjct: 61 LQEAQVMKKIRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
A A G+A++ ++RD + +NIL+ + K++DFGLA+ E ++
Sbjct: 120 --AAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQG 174
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+ APE + G T +SDV+SFG++L E+ T
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEF-MARGSVENNLFSKVLLPLPWSIRMKIA 224
E++ L H+ H N++ L+ Y+F + ++ +L + L +
Sbjct: 73 ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLV 132
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMG 284
+ KGL ++H A V++RD K N+ ++ D K+ DFGLA+ +V TR
Sbjct: 133 YQMLKGLKYIHSA--GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR--- 187
Query: 285 TYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQ 331
Y APE I++ H D++S G ++ E+LTG K+L K + +Q
Sbjct: 188 --WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG-KTLFKGKDYLDQ 232
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 12/159 (7%)
Query: 163 WLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKV--LLPLPWSIR 220
+L E + L H LV+L E E ++ E+M++GS+ + L ++ L LP +
Sbjct: 227 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 285
Query: 221 MKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVST 280
M A A G+A++ ++RD + +NIL+ + K++DFGL G + + +
Sbjct: 286 M--AAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGL---GRLIEDNEYTA 338
Query: 281 RIMGTY--GYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
R + + APE + G T +SDV+SFG++L E+ T
Sbjct: 339 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 377
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKV--LLPLPWSIRM 221
L E + L H LV+L E E ++ E+M++GS+ + L ++ L LP + M
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
A A G+A++ ++RD +NIL+ + K++DFGLA+ E ++
Sbjct: 120 --AAQIASGMAYVERMN--YVHRDLAAANILVGENLVCKVADFGLARL-IEDNEYTARQG 174
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+ APE + G T +SDV+SFG++L E+ T
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 27/206 (13%)
Query: 138 REGLQPVPVAVKVHDGDN-SYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYE 196
R L VAVK+ D + ++ EV L+HPN+VKL ++ L+ E
Sbjct: 34 RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXE 93
Query: 197 FMARGSVENNLFSKVLLPLPWSIRMKIAFGAAK------GLAFLHEAEKPVIYRDFKTSN 250
+ + G V + L + R K AK + + H+ K +++RD K N
Sbjct: 94 YASGGEVFDYLVAHG--------RXKEKEARAKFRQIVSAVQYCHQ--KFIVHRDLKAEN 143
Query: 251 ILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIM-TGHLTPRSDVYSFG 309
+LLD D N K++DFG + + G+K G YAAPE + P DV+S G
Sbjct: 144 LLLDADXNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 310 VVLLEILTGRKSLDKSRPAREQNLAD 335
V+L +++G S P QNL +
Sbjct: 201 VILYTLVSG------SLPFDGQNLKE 220
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 89/178 (50%), Gaps = 18/178 (10%)
Query: 146 VAVKVHDGDNSYQGHREWL-AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVE 204
VAVK+ D Q RE L EV+ + H N+V++ E ++ EF+ G++
Sbjct: 73 VAVKMMDLRK--QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL- 129
Query: 205 NNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDF 264
++ S+V L + + LA+LH + VI+RD K+ +ILL D KLSDF
Sbjct: 130 TDIVSQVRLNEEQI--ATVCEAVLQALAYLHA--QGVIHRDIKSDSILLTLDGRVKLSDF 185
Query: 265 G----LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
G ++KD P+ ++GT + APE I D++S G++++E++ G
Sbjct: 186 GFCAQISKDVPK------RKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDG 237
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 127 CVYKGFISEDLREGLQPVP------VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVK 180
C+ +G D+ +G+ P VA+K S ++L E + + HP++VK
Sbjct: 17 CIGEGQFG-DVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 181 LIGYCCEDEHRVLIYEFMARGSVENNL----FSKVLLPLPWSIRMKIAFGAAKGLAFLHE 236
LIG E+ + I E G + + L FS L L + A+ + LA+L
Sbjct: 76 LIGVITENPVWI-IMELCTLGELRSFLQVRKFSLDLASL-----ILYAYQLSTALAYLE- 128
Query: 237 AEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMT 296
K ++RD N+L+ ++ KL DFGL++ + S + + APE I
Sbjct: 129 -SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL-PIKWMAPESINF 186
Query: 297 GHLTPRSDVYSFGVVLLEIL 316
T SDV+ FGV + EIL
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDG-PEGDKSHVSTRIM 283
+ +GL ++H A V++RD K SN+LL+T + K+ DFGLA+ P+ D + T +
Sbjct: 131 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 284 GTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGR 319
T Y APE ++ +S D++S G +L E+L+ R
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKV--LLPLPWSIRM 221
L E + L H LV+L E E ++ E+M++G + + L ++ L LP + M
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDM 119
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
A A G+A++ ++RD + +NIL+ + K++DFGLA+ E ++
Sbjct: 120 --AAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQG 174
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+ APE + G T +SDV+SFG++L E+ T
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDG-PEGDKSHVSTRIM 283
+ +GL ++H A V++RD K SN+LL+T + K+ DFGLA+ P+ D + T +
Sbjct: 131 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYV 188
Query: 284 GTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGR 319
T Y APE ++ +S D++S G +L E+L+ R
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 22/163 (13%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKV--LLPLPWSIRM 221
L E + L H LV+L E E ++ E+M +GS+ + L + L LP + M
Sbjct: 58 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDM 116
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAK-------DGPEGD 274
A G+A++ ++RD + +NIL+ + K++DFGLA+ +G
Sbjct: 117 SAQI--ASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGA 172
Query: 275 KSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
K + + APE + G T +SDV+SFG++L E+ T
Sbjct: 173 KFPIK--------WTAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDG-PEGDKSHVSTRIM 283
+ +GL ++H A V++RD K SN+LL+T + K+ DFGLA+ P+ D + T +
Sbjct: 131 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 284 GTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGR 319
T Y APE ++ +S D++S G +L E+L+ R
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKV--LLPLPWSIRM 221
L E + L H LV+L E E ++ E+M +GS+ + L + L LP + M
Sbjct: 58 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDM 116
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
A G+A++ ++RD + +NIL+ + K++DFGLA+ E ++
Sbjct: 117 SAQI--ASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQG 171
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+ APE + G T +SDV+SFG++L E+ T
Sbjct: 172 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 214 PLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKD-GPE 272
P+ +++ A + L F H+ +I+RD K +NIL+ K+ DFG+A+
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANILISATNAVKVVDFGIARAIADS 169
Query: 273 GDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
G+ + ++GT Y +PE + RSDVYS G VL E+LTG
Sbjct: 170 GNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDG-PEGDKSHVSTRIM 283
+ +GL ++H A V++RD K SN+LL+T + K+ DFGLA+ P+ D + T +
Sbjct: 135 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 284 GTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGR 319
T Y APE ++ +S D++S G +L E+L+ R
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 83/161 (51%), Gaps = 15/161 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIR--- 220
+ E+ L L HPN+V LI + L++EFM + KVL ++
Sbjct: 67 IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKD------LKKVLDENKTGLQDSQ 120
Query: 221 MKI-AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+KI + +G+A H+ +++RD K N+L+++D KL+DFGLA+ +S+
Sbjct: 121 IKIYLYQLLRGVAHCHQHR--ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY-- 176
Query: 280 TRIMGTYGYAAPEYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
T + T Y AP+ +M + + D++S G + E++TG+
Sbjct: 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKV--LLPLPWSIRM 221
L E + L H LV+L E E ++ E+M++G + + L ++ L LP + M
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDM 119
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
A A G+A++ ++RD + +NIL+ + K++DFGLA+ E ++
Sbjct: 120 --AAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQG 174
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+ APE + G T +SDV+SFG++L E+ T
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 82/191 (42%), Gaps = 19/191 (9%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHL-SHPNLVKLIGYCCEDEHRVLIYEFMARGS 202
+ VAVK+ ++E+ L +L +H N+V L+G C ++I E+ G
Sbjct: 70 MTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGD 129
Query: 203 VENNLFSK----------------VLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDF 246
+ N L K L L + ++ AKG+AFL A K I+RD
Sbjct: 130 LLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL--ASKNCIHRDL 187
Query: 247 KTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVY 306
NILL K+ DFGLA+D V + APE I T SDV+
Sbjct: 188 AARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVW 247
Query: 307 SFGVVLLEILT 317
S+G+ L E+ +
Sbjct: 248 SYGIFLWELFS 258
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDG-PEGDKSHVSTRIM 283
+ +GL ++H A V++RD K SN+LL+T + K+ DFGLA+ P+ D + T +
Sbjct: 135 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 284 GTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGR 319
T Y APE ++ +S D++S G +L E+L+ R
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDG-PEGDKSHVSTRIM 283
+ +GL ++H A V++RD K SN+LL+T + K+ DFGLA+ P+ D + T +
Sbjct: 135 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 284 GTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGR 319
T Y APE ++ +S D++S G +L E+L+ R
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDG-PEGDKSHVSTRIMGTYG 287
+GL ++H A V++RD K SN+L++T + K+ DFGLA+ PE D + T + T
Sbjct: 155 RGLKYIHSAN--VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRW 212
Query: 288 YAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGR 319
Y APE ++ +S D++S G +L E+L+ R
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDG-PEGDKSHVSTRIM 283
+ +GL ++H A V++RD K SN+LL+T + K+ DFGLA+ P+ D + T +
Sbjct: 131 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 284 GTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGR 319
T Y APE ++ +S D++S G +L E+L+ R
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 83/161 (51%), Gaps = 15/161 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIR--- 220
+ E+ L L HPN+V LI + L++EFM + KVL ++
Sbjct: 67 IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKD------LKKVLDENKTGLQDSQ 120
Query: 221 MKI-AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+KI + +G+A H+ +++RD K N+L+++D KL+DFGLA+ +S+
Sbjct: 121 IKIYLYQLLRGVAHCHQHR--ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY-- 176
Query: 280 TRIMGTYGYAAPEYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
T + T Y AP+ +M + + D++S G + E++TG+
Sbjct: 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 77/154 (50%), Gaps = 24/154 (15%)
Query: 174 SHPNLVKLIGYCC--EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIA---FGAA 228
+HP L +L +CC + + EF+ G + + + S R A F AA
Sbjct: 82 NHPFLTQL--FCCFQTPDRLFFVMEFVNGGDL--------MFHIQKSRRFDEARARFYAA 131
Query: 229 K---GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM-G 284
+ L FLH+ K +IYRD K N+LLD + + KL+DFG+ K EG + V+T G
Sbjct: 132 EIISALMFLHD--KGIIYRDLKLDNVLLDHEGHCKLADFGMCK---EGICNGVTTATFCG 186
Query: 285 TYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
T Y APE + P D ++ GV+L E+L G
Sbjct: 187 TPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDG-PEGDKSHVSTRIM 283
+ +GL ++H A V++RD K SN+LL+T + K+ DFGLA+ P+ D + T +
Sbjct: 151 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 284 GTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGR 319
T Y APE ++ +S D++S G +L E+L+ R
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 16/160 (10%)
Query: 166 EVIFLGHLSHPNLVKLI-----GYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIR 220
E+ L HL H N++ L+ ED V + + + N + S+ L
Sbjct: 77 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF- 135
Query: 221 MKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVST 280
+ + +GL ++H A +I+RD K SN+ ++ D ++ DFGLA+ E +V+T
Sbjct: 136 --LVYQLLRGLKYIHSA--GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVAT 191
Query: 281 RIMGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
R Y APE ++ H D++S G ++ E+L G+
Sbjct: 192 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
E+ +L L HP+++KL V++ E+ A G + + + K + R
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQI 117
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A H+ +++RD K N+LLD + N K++DFGL+ +G+ S G+
Sbjct: 118 ICAIEYCHRHK----IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GS 170
Query: 286 YGYAAPEYIMTGHL--TPRSDVYSFGVVLLEILTGRKSLD 323
YAAPE ++ G L P DV+S G+VL +L GR D
Sbjct: 171 PNYAAPE-VINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDG-PEGDKSHVSTRIM 283
+ +GL ++H A V++RD K SN+LL+T + K+ DFGLA+ P+ D + T +
Sbjct: 133 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 284 GTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGR 319
T Y APE ++ +S D++S G +L E+L+ R
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDG-PEGDKSHVSTRIM 283
+ +GL ++H A V++RD K SN+LL+T + K+ DFGLA+ P+ D + T +
Sbjct: 129 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 284 GTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGR 319
T Y APE ++ +S D++S G +L E+L+ R
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDG-PEGDKSHVSTRIM 283
+ +GL ++H A V++RD K SN+LL+T + K+ DFGLA+ P+ D + T +
Sbjct: 135 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 284 GTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGR 319
T Y APE ++ +S D++S G +L E+L+ R
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDG-PEGDKSHVSTRIM 283
+ +GL ++H A V++RD K SN+LL+T + K+ DFGLA+ P+ D + T +
Sbjct: 129 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 284 GTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGR 319
T Y APE ++ +S D++S G +L E+L+ R
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDG-PEGDKSHVSTRIM 283
+ +GL ++H A V++RD K SN+LL+T + K+ DFGLA+ P+ D + T +
Sbjct: 136 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 193
Query: 284 GTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGR 319
T Y APE ++ +S D++S G +L E+L+ R
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDG-PEGDKSHVSTRIM 283
+ +GL ++H A V++RD K SN+LL+T + K+ DFGLA+ P+ D + T +
Sbjct: 137 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 194
Query: 284 GTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGR 319
T Y APE ++ +S D++S G +L E+L+ R
Sbjct: 195 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDG-PEGDKSHVSTRIM 283
+ +GL ++H A V++RD K SN+LL+T + K+ DFGLA+ P+ D + T +
Sbjct: 128 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 185
Query: 284 GTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGR 319
T Y APE ++ +S D++S G +L E+L+ R
Sbjct: 186 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDG-PEGDKSHVSTRIM 283
+ +GL ++H A V++RD K SN+LL+T + K+ DFGLA+ P+ D + T +
Sbjct: 135 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 284 GTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGR 319
T Y APE ++ +S D++S G +L E+L+ R
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 82/191 (42%), Gaps = 19/191 (9%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHL-SHPNLVKLIGYCCEDEHRVLIYEFMARGS 202
+ VAVK+ ++E+ L +L +H N+V L+G C ++I E+ G
Sbjct: 72 MTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGD 131
Query: 203 VENNLFSK----------------VLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDF 246
+ N L K L L + ++ AKG+AFL A K I+RD
Sbjct: 132 LLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL--ASKNCIHRDL 189
Query: 247 KTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVY 306
NILL K+ DFGLA+D V + APE I T SDV+
Sbjct: 190 AARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVW 249
Query: 307 SFGVVLLEILT 317
S+G+ L E+ +
Sbjct: 250 SYGIFLWELFS 260
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDG-PEGDKSHVSTRIM 283
+ +GL ++H A V++RD K SN+LL+T + K+ DFGLA+ P+ D + T +
Sbjct: 133 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 284 GTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGR 319
T Y APE ++ +S D++S G +L E+L+ R
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDG-PEGDKSHVSTRIM 283
+ +GL ++H A V++RD K SN+LL+T + K+ DFGLA+ P+ D + T +
Sbjct: 139 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 196
Query: 284 GTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGR 319
T Y APE ++ +S D++S G +L E+L+ R
Sbjct: 197 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDG-PEGDKSHVSTRIM 283
+ +GL ++H A V++RD K SN+LL+T + K+ DFGLA+ P+ D + T +
Sbjct: 131 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 284 GTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGR 319
T Y APE ++ +S D++S G +L E+L+ R
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEF-MARGSVENNLFSKVLLPLPWSIRMKIA 224
E++ L H+ H N++ L+ Y+F + ++ +L + + +
Sbjct: 91 ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLV 150
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMG 284
+ KGL ++H A V++RD K N+ ++ D K+ DFGLA+ +V TR
Sbjct: 151 YQMLKGLKYIHSA--GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR--- 205
Query: 285 TYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQ 331
Y APE I++ H D++S G ++ E+LTG K+L K + +Q
Sbjct: 206 --WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG-KTLFKGKDYLDQ 250
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDG-PEGDKSHVSTRIM 283
+ +GL ++H A V++RD K SN+LL+T + K+ DFGLA+ P+ D + T +
Sbjct: 133 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 284 GTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGR 319
T Y APE ++ +S D++S G +L E+L+ R
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 127 CVYKGFISEDLREGLQPVP------VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVK 180
C+ +G D+ +G+ P VA+K S ++L E + + HP++VK
Sbjct: 397 CIGEGQFG-DVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 181 LIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKP 240
LIG E+ + I E G + + L + L + + A+ + LA+L K
Sbjct: 456 LIGVITENPVWI-IMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLE--SKR 511
Query: 241 VIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLT 300
++RD N+L+ ++ KL DFGL++ E + +++ + APE I T
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 301 PRSDVYSFGVVLLEIL 316
SDV+ FGV + EIL
Sbjct: 571 SASDVWMFGVCMWEIL 586
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 192 VLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNI 251
L+ M G ++ +++ P + + A GL LH ++YRD K NI
Sbjct: 260 CLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER--IVYRDLKPENI 317
Query: 252 LLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVV 311
LLD + ++SD GLA PEG + R+ GT GY APE + T D ++ G +
Sbjct: 318 LLDDHGHIRISDLGLAVHVPEGQT--IKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCL 374
Query: 312 LLEILTGRKSLDKSR 326
L E++ G+ + +
Sbjct: 375 LYEMIAGQSPFQQRK 389
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDG-PEGDKSHVSTRIM 283
+ +GL ++H A V++RD K SN+LL+T + K+ DFGLA+ P+ D + T +
Sbjct: 151 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 284 GTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGR 319
T Y APE ++ +S D++S G +L E+L+ R
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 82/191 (42%), Gaps = 19/191 (9%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHL-SHPNLVKLIGYCCEDEHRVLIYEFMARGS 202
+ VAVK+ ++E+ L +L +H N+V L+G C ++I E+ G
Sbjct: 77 MTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGD 136
Query: 203 VENNLFSK----------------VLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDF 246
+ N L K L L + ++ AKG+AFL A K I+RD
Sbjct: 137 LLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL--ASKNCIHRDL 194
Query: 247 KTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVY 306
NILL K+ DFGLA+D V + APE I T SDV+
Sbjct: 195 AARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVW 254
Query: 307 SFGVVLLEILT 317
S+G+ L E+ +
Sbjct: 255 SYGIFLWELFS 265
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Query: 225 FGA--AKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+GA L +LH +EK V+YRD K N++LD D + K++DFGL K+G + D + + T
Sbjct: 256 YGAEIVSALDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK-DGATMKT-F 312
Query: 283 MGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
GT Y APE + D + GVV+ E++ GR
Sbjct: 313 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 82/191 (42%), Gaps = 19/191 (9%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHL-SHPNLVKLIGYCCEDEHRVLIYEFMARGS 202
+ VAVK+ ++E+ L +L +H N+V L+G C ++I E+ G
Sbjct: 54 MTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGD 113
Query: 203 VENNLFSK----------------VLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDF 246
+ N L K L L + ++ AKG+AFL A K I+RD
Sbjct: 114 LLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL--ASKNCIHRDL 171
Query: 247 KTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVY 306
NILL K+ DFGLA+D V + APE I T SDV+
Sbjct: 172 AARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVW 231
Query: 307 SFGVVLLEILT 317
S+G+ L E+ +
Sbjct: 232 SYGIFLWELFS 242
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Query: 225 FGA--AKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+GA L +LH +EK V+YRD K N++LD D + K++DFGL K+G + D + + T
Sbjct: 253 YGAEIVSALDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK-DGATMKT-F 309
Query: 283 MGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
GT Y APE + D + GVV+ E++ GR
Sbjct: 310 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 5/134 (3%)
Query: 193 LIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNIL 252
L+ M G ++ +++ P + + A GL LH ++YRD K NIL
Sbjct: 261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER--IVYRDLKPENIL 318
Query: 253 LDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
LD + ++SD GLA PEG + R+ GT GY APE + T D ++ G +L
Sbjct: 319 LDDHGHIRISDLGLAVHVPEGQT--IKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLL 375
Query: 313 LEILTGRKSLDKSR 326
E++ G+ + +
Sbjct: 376 YEMIAGQSPFQQRK 389
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 17/170 (10%)
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIA 224
AE L + HP +V LI LI E+++ G LF ++ +
Sbjct: 70 AERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGE----LFMQLEREGIFMEDTACF 125
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDG-PEGDKSHVSTRIM 283
+ A +A H +K +IYRD K NI+L+ + KL+DFGL K+ +G +H
Sbjct: 126 YLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT---FC 182
Query: 284 GTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG---------RKSLDK 324
GT Y APE +M D +S G ++ ++LTG +K++DK
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDK 232
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 214 PLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKD-GPE 272
P+ +++ A + L F H+ +I+RD K +NI++ K+ DFG+A+
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Query: 273 GDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
G+ + ++GT Y +PE + RSDVYS G VL E+LTG
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 127 CVYKGFISEDLREGLQPVP------VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVK 180
C+ +G D+ +G+ P VA+K S ++L E + + HP++VK
Sbjct: 14 CIGEGQFG-DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 181 LIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKP 240
LIG E+ + I E G + + L + L + + A+ + LA+L K
Sbjct: 73 LIGVITENPVWI-IMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLE--SKR 128
Query: 241 VIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLT 300
++RD N+L+ ++ KL DFGL++ E + +++ + APE I T
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 187
Query: 301 PRSDVYSFGVVLLEIL 316
SDV+ FGV + EIL
Sbjct: 188 SASDVWMFGVCMWEIL 203
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 214 PLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKD-GPE 272
P+ +++ A + L F H+ +I+RD K +NI++ K+ DFG+A+
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Query: 273 GDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
G+ + ++GT Y +PE + RSDVYS G VL E+LTG
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 6/95 (6%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-IMGTYGY 288
GL FLH+ + +IYRD K N++LD++ + K++DFG+ K E V+TR GT Y
Sbjct: 132 GLFFLHK--RGIIYRDLKLDNVMLDSEGHIKIADFGMCK---EHMMDGVTTREFCGTPDY 186
Query: 289 AAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLD 323
APE I D +++GV+L E+L G+ D
Sbjct: 187 IAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 214 PLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKD-GPE 272
P+ +++ A + L F H+ +I+RD K +NI++ K+ DFG+A+
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Query: 273 GDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
G+ + ++GT Y +PE + RSDVYS G VL E+LTG
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 214 PLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKD-GPE 272
P+ +++ A + L F H+ +I+RD K +NI++ K+ DFG+A+
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Query: 273 GDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
G+ + ++GT Y +PE + RSDVYS G VL E+LTG
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 127 CVYKGFISEDLREGLQPVP------VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVK 180
C+ +G D+ +G+ P VA+K S ++L E + + HP++VK
Sbjct: 17 CIGEGQFG-DVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 181 LIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKP 240
LIG E+ + I E G + + L + L + + A+ + LA+L K
Sbjct: 76 LIGVITENPVWI-IMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLE--SKR 131
Query: 241 VIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLT 300
++RD N+L+ ++ KL DFGL++ E + +++ + APE I T
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 301 PRSDVYSFGVVLLEIL 316
SDV+ FGV + EIL
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 127 CVYKGFISEDLREGLQPVP------VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVK 180
C+ +G D+ +G+ P VA+K S ++L E + + HP++VK
Sbjct: 19 CIGEGQFG-DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 77
Query: 181 LIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKP 240
LIG E+ + I E G + + L + L + + A+ + LA+L K
Sbjct: 78 LIGVITENPVWI-IMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLE--SKR 133
Query: 241 VIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLT 300
++RD N+L+ ++ KL DFGL++ E + +++ + APE I T
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRFT 192
Query: 301 PRSDVYSFGVVLLEIL 316
SDV+ FGV + EIL
Sbjct: 193 SASDVWMFGVCMWEIL 208
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 127 CVYKGFISEDLREGLQPVP------VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVK 180
C+ +G D+ +G+ P VA+K S ++L E + + HP++VK
Sbjct: 17 CIGEGQFG-DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 181 LIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKP 240
LIG E+ + I E G + + L + L + + A+ + LA+L K
Sbjct: 76 LIGVITENPVWI-IMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLE--SKR 131
Query: 241 VIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLT 300
++RD N+L+ ++ KL DFGL++ E + +++ + APE I T
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 301 PRSDVYSFGVVLLEIL 316
SDV+ FGV + EIL
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 214 PLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKD-GPE 272
P+ +++ A + L F H+ +I+RD K +NI++ K+ DFG+A+
Sbjct: 129 PMTPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 186
Query: 273 GDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
G+ + ++GT Y +PE + RSDVYS G VL E+LTG
Sbjct: 187 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 130 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 186
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 187 ----WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 15/169 (8%)
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIA 224
AE L + HP +V LI LI E+++ G LF ++ +
Sbjct: 70 AERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGE----LFMQLEREGIFMEDTACF 125
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMG 284
+ A +A H +K +IYRD K NI+L+ + KL+DFGL K+ V+ G
Sbjct: 126 YLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH--DGTVTHXFCG 183
Query: 285 TYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG---------RKSLDK 324
T Y APE +M D +S G ++ ++LTG +K++DK
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDK 232
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 127 CVYKGFISEDLREGLQPVP------VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVK 180
C+ +G D+ +G+ P VA+K S ++L E + + HP++VK
Sbjct: 20 CIGEGQFG-DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 78
Query: 181 LIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKP 240
LIG E+ + I E G + + L + L + + A+ + LA+L K
Sbjct: 79 LIGVITENPVWI-IMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLE--SKR 134
Query: 241 VIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLT 300
++RD N+L+ ++ KL DFGL++ E + +++ + APE I T
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRFT 193
Query: 301 PRSDVYSFGVVLLEIL 316
SDV+ FGV + EIL
Sbjct: 194 SASDVWMFGVCMWEIL 209
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 127 CVYKGFISEDLREGLQPVP------VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVK 180
C+ +G D+ +G+ P VA+K S ++L E + + HP++VK
Sbjct: 45 CIGEGQFG-DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 103
Query: 181 LIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKP 240
LIG E+ + I E G + + L + L + + A+ + LA+L K
Sbjct: 104 LIGVITENPVWI-IMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLE--SKR 159
Query: 241 VIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLT 300
++RD N+L+ ++ KL DFGL++ E + +++ + APE I T
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRFT 218
Query: 301 PRSDVYSFGVVLLEIL 316
SDV+ FGV + EIL
Sbjct: 219 SASDVWMFGVCMWEIL 234
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 176 PNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLH 235
P +V+ G + + E M G+ L ++ P+P I K+ K L +L
Sbjct: 84 PYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK 141
Query: 236 EAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIM 295
E + VI+RD K SNILLD KL DFG++ + DK+ R G Y APE I
Sbjct: 142 E-KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD-DKA--KDRSAGCAAYMAPERID 197
Query: 296 TGHLTP-----RSDVYSFGVVLLEILTGR 319
T R+DV+S G+ L+E+ TG+
Sbjct: 198 PPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
E+ +L L HP+++KL + +++ E+ N LF ++ S + F
Sbjct: 54 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAG-----NELFDYIVQRDKMSEQEARRF 108
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A + +++RD K N+LLD N K++DFGL+ +G+ S G+
Sbjct: 109 FQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GS 165
Query: 286 YGYAAPEYIMTGHL--TPRSDVYSFGVVLLEILTGRKSL-DKSRPAREQNLAD 335
YAAPE +++G L P DV+S GV+L +L R D+S P +N+++
Sbjct: 166 PNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISN 217
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 127 CVYKGFISEDLREGLQPVP------VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVK 180
C+ +G D+ +G+ P VA+K S ++L E + + HP++VK
Sbjct: 22 CIGEGQFG-DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 80
Query: 181 LIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKP 240
LIG E+ + I E G + + L + L + + A+ + LA+L K
Sbjct: 81 LIGVITENPVWI-IMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLE--SKR 136
Query: 241 VIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLT 300
++RD N+L+ ++ KL DFGL++ E + +++ + APE I T
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRFT 195
Query: 301 PRSDVYSFGVVLLEIL 316
SDV+ FGV + EIL
Sbjct: 196 SASDVWMFGVCMWEIL 211
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 135 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR- 191
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 192 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
E+ +L L HP+++KL + +++ E+ N LF ++ S + F
Sbjct: 58 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAG-----NELFDYIVQRDKMSEQEARRF 112
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A + +++RD K N+LLD N K++DFGL+ +G+ S G+
Sbjct: 113 FQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GS 169
Query: 286 YGYAAPEYIMTGHL--TPRSDVYSFGVVLLEILTGRKSL-DKSRPAREQNLAD 335
YAAPE +++G L P DV+S GV+L +L R D+S P +N+++
Sbjct: 170 PNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISN 221
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 130 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR- 186
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 135 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR- 191
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 192 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 137 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR- 193
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 194 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 137 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR- 193
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 194 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 10/160 (6%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
E+ L HP+++KL ++ E+++ G + + + L S R+
Sbjct: 66 EIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQI 125
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
G+ + H V++RD K N+LLD NAK++DFGL+ +G+ S G+
Sbjct: 126 --LSGVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GS 178
Query: 286 YGYAAPEYIMTGHL--TPRSDVYSFGVVLLEILTGRKSLD 323
YAAPE +++G L P D++S GV+L +L G D
Sbjct: 179 PNYAAPE-VISGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
E+ +L L HP+++KL + +++ E+ N LF ++ S + F
Sbjct: 64 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAG-----NELFDYIVQRDKMSEQEARRF 118
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A + +++RD K N+LLD N K++DFGL+ +G+ S G+
Sbjct: 119 FQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GS 175
Query: 286 YGYAAPEYIMTGHL--TPRSDVYSFGVVLLEILTGRKSL-DKSRPAREQNLAD 335
YAAPE +++G L P DV+S GV+L +L R D+S P +N+++
Sbjct: 176 PNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISN 227
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 127 CVYKGFISEDLREGLQPVP------VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVK 180
C+ +G D+ +G+ P VA+K S ++L E + + HP++VK
Sbjct: 17 CIGEGQFG-DVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 181 LIGYCCEDEHRVLIYEFMARGSVENNL----FSKVLLPLPWSIRMKIAFGAAKGLAFLHE 236
LIG E+ + I E G + + L FS L L + A+ + LA+L
Sbjct: 76 LIGVITENPVWI-IMELCTLGELRSFLQVRKFSLDLASL-----ILYAYQLSTALAYLE- 128
Query: 237 AEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMT 296
K ++RD N+L+ KL DFGL++ E + +++ + APE I
Sbjct: 129 -SKRFVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINF 186
Query: 297 GHLTPRSDVYSFGVVLLEIL 316
T SDV+ FGV + EIL
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 137 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR- 193
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 194 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 141 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR- 197
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 198 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 12/196 (6%)
Query: 127 CVYKGFISEDLREGLQPVP------VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVK 180
C+ +G D+ +G+ P VA+K S ++L E + + HP++VK
Sbjct: 397 CIGEGQFG-DVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 181 LIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKP 240
LIG E+ + I E G + + L + L + + A+ + LA+L K
Sbjct: 456 LIGVITENPVWI-IMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLE--SKR 511
Query: 241 VIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLT 300
++RD N+L+ KL DFGL++ E + +++ + APE I T
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 301 PRSDVYSFGVVLLEIL 316
SDV+ FGV + EIL
Sbjct: 571 SASDVWMFGVCMWEIL 586
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
E+ +L L HP+++KL + +++ E+ N LF ++ S + F
Sbjct: 63 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAG-----NELFDYIVQRDKMSEQEARRF 117
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A + +++RD K N+LLD N K++DFGL+ +G+ S G+
Sbjct: 118 FQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GS 174
Query: 286 YGYAAPEYIMTGHL--TPRSDVYSFGVVLLEILTGRKSL-DKSRPAREQNLAD 335
YAAPE +++G L P DV+S GV+L +L R D+S P +N+++
Sbjct: 175 PNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISN 226
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L EV L L HPN++KL + + + L+ E G + + + S+ + R I
Sbjct: 74 LREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--I 131
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDKSHVST 280
G+ ++H + +++RD K N+LL++ D N ++ DFGL+ + S
Sbjct: 132 IRQVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMK 186
Query: 281 RIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+GT Y APE ++ G + DV+S GV+L +L+G
Sbjct: 187 DKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 136 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR- 192
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 193 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 130 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 186
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 130 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 186
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 130 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 186
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 130 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 186
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 164 LAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMK 222
L EV L +S HPN+++L + L+++ M +G + + L KV L + K
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKET--RK 128
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
I + + LH+ +++RD K NILLD D N KL+DFG + G+K +
Sbjct: 129 IMRALLEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EV 183
Query: 283 MGTYGYAAPEYIMTGH------LTPRSDVYSFGVVLLEILTG 318
GT Y APE I D++S GV++ +L G
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 130 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 186
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 164 LAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMK 222
L EV L +S HPN+++L + L+++ M +G + + L KV L + K
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKET--RK 115
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
I + + LH+ +++RD K NILLD D N KL+DFG + G+K +
Sbjct: 116 IMRALLEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EV 170
Query: 283 MGTYGYAAPEYIMTGH------LTPRSDVYSFGVVLLEILTG 318
GT Y APE I D++S GV++ +L G
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L EV L L HPN++KL + + + L+ E G + + + S+ + R I
Sbjct: 80 LREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--I 137
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDKSHVST 280
G+ ++H+ + +++RD K N+LL++ D N ++ DFGL+ + S
Sbjct: 138 IRQVLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMK 192
Query: 281 RIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+GT Y APE ++ G + DV+S GV+L +L+G
Sbjct: 193 DKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 135 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 191
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 192 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 132 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR- 188
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 189 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 16/160 (10%)
Query: 166 EVIFLGHLSHPNLVKLI-----GYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIR 220
E+ L HL H N++ L+ ED V + + + N + + L
Sbjct: 69 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF- 127
Query: 221 MKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVST 280
+ + +GL ++H A +I+RD K SN+ ++ D ++ DFGLA+ E +V+T
Sbjct: 128 --LVYQLLRGLKYIHSA--GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVAT 183
Query: 281 RIMGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
R Y APE ++ H D++S G ++ E+L G+
Sbjct: 184 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 135 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 191
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 192 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 129 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 185
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 186 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 130 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 186
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 137 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 193
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 194 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 132 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 188
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 189 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 132 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 188
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 189 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 140 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 196
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 197 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 130 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 186
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDG-PEGDKSHVSTRIM 283
+ +GL ++H A V++RD K SN+LL+T + K+ DFGLA+ P+ D + +
Sbjct: 135 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 192
Query: 284 GTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGR 319
T Y APE ++ +S D++S G +L E+L+ R
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDG-PEGDKSHVSTRIM 283
+ +GL ++H A V++RD K SN+LL+T + K+ DFGLA+ P+ D + +
Sbjct: 136 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 193
Query: 284 GTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGR 319
T Y APE ++ +S D++S G +L E+L+ R
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 136 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 192
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 193 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 136 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 192
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 193 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 130 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 186
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 132 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 188
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 189 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 166 EVIFLGHLSHPNLVKLI-----GYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIR 220
E+ L H+ H N++ L+ E+ + V + + + N + S+ L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQF- 129
Query: 221 MKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVST 280
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGL + + +V+T
Sbjct: 130 --LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVAT 185
Query: 281 RIMGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
R Y APE ++ H D++S G ++ E+LTGR
Sbjct: 186 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 141 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 197
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 198 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 130 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 186
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 136 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 192
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 193 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 16/160 (10%)
Query: 166 EVIFLGHLSHPNLVKLI-----GYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIR 220
E+ L HL H N++ L+ ED V + + + N + + L
Sbjct: 77 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF- 135
Query: 221 MKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVST 280
+ + +GL ++H A +I+RD K SN+ ++ D ++ DFGLA+ E +V+T
Sbjct: 136 --LVYQLLRGLKYIHSA--GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVAT 191
Query: 281 RIMGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
R Y APE ++ H D++S G ++ E+L G+
Sbjct: 192 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 126 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 182
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 183 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 127 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 183
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 184 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 126 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 182
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 183 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 142 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 198
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 199 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 142 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 198
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 199 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 127 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 183
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 184 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 164 LAEVIFLGHLS-HPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMK 222
L EV L +S HPN+++L + L+++ M +G + + L KV L + K
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKET--RK 128
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
I + + LH+ +++RD K NILLD D N KL+DFG + G+K +
Sbjct: 129 IMRALLEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---SV 183
Query: 283 MGTYGYAAPEYIMTGH------LTPRSDVYSFGVVLLEILTG 318
GT Y APE I D++S GV++ +L G
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L EV L L HPN++KL + + + L+ E G + + + S+ + R I
Sbjct: 97 LREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--I 154
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDKSHVST 280
G+ ++H + +++RD K N+LL++ D N ++ DFGL+ + S
Sbjct: 155 IRQVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMK 209
Query: 281 RIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+GT Y APE ++ G + DV+S GV+L +L+G
Sbjct: 210 DKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 142 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 198
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 199 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 153 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 209
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 210 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 150 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 206
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 207 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 97/244 (39%), Gaps = 24/244 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VA+K+ D + + + E+ L + K G + +I E++ GS +
Sbjct: 51 VAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALD 110
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFG 265
L + + +K KGL +LH +K I+RD K +N+LL + KL+DFG
Sbjct: 111 LLRAGPFDEFQIATMLKEIL---KGLDYLHSEKK--IHRDIKAANVLLSEQGDVKLADFG 165
Query: 266 LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKS 325
+A G D +GT + APE I ++D++S G+ +E+ G
Sbjct: 166 VA--GQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDM 223
Query: 326 RPAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLM 385
P R L P L GD+ CLN +P RP
Sbjct: 224 HPMRVLFLIPKNNP-------------PTLVGDF----TKSFKEFIDACLNKDPSFRPTA 266
Query: 386 RDIV 389
++++
Sbjct: 267 KELL 270
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 15/195 (7%)
Query: 130 KGFISEDLREGLQPVPVA-VKVHDGDNSYQGHREWLAEVIFLGHLS---HPNLVKLIGYC 185
K F + DL+ G + V + V+V G+ + EV L HL HPN+V+L C
Sbjct: 26 KVFKARDLKNGGRFVALKRVRVQTGEEGMP--LSTIREVAVLRHLETFEHPNVVRLFDVC 83
Query: 186 C---EDEHRVLIYEFMARGSVENNLFSKVLLP-LPWSIRMKIAFGAAKGLAFLHEAEKPV 241
D L F KV P +P + F +GL FLH V
Sbjct: 84 TVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR--V 141
Query: 242 IYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTP 301
++RD K NIL+ + KL+DFGLA+ T ++ T Y APE ++
Sbjct: 142 VHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVVVTLWYRAPEVLLQSSYAT 198
Query: 302 RSDVYSFGVVLLEIL 316
D++S G + E+
Sbjct: 199 PVDLWSVGCIFAEMF 213
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 128 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 184
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 185 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 153 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR- 209
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 210 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L EV L L HPN++KL + + + L+ E G + + + S+ + R I
Sbjct: 98 LREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--I 155
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDKSHVST 280
G+ ++H + +++RD K N+LL++ D N ++ DFGL+ + S
Sbjct: 156 IRQVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMK 210
Query: 281 RIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+GT Y APE ++ G + DV+S GV+L +L+G
Sbjct: 211 DKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 149 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 205
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 206 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 149 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 205
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 206 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 112 ANFRQDRVLXXXXXXCVYKGFISEDLREG--LQPVPVAVK---VHDGDNSYQGHREWLAE 166
ANFR ++ + +G SE R L VPVA+K + D ++ + + + E
Sbjct: 32 ANFRIEKKIG--------RGQFSEVYRAACLLDGVPVALKKVQIFDLMDA-KARADCIKE 82
Query: 167 VIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNL--FSKVLLPLPWSIRMKIA 224
+ L L+HPN++K ED ++ E G + + F K +P K
Sbjct: 83 IDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYF 142
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMG 284
L +H + V++RD K +N+ + KL D GL + K+ + ++G
Sbjct: 143 VQLCSALEHMHS--RRVMHRDIKPANVFITATGVVKLGDLGLGRFF--SSKTTAAHSLVG 198
Query: 285 TYGYAAPEYIMTGHLTPRSDVYSFGVVLLEI 315
T Y +PE I +SD++S G +L E+
Sbjct: 199 TPYYMSPERIHENGYNFKSDIWSLGCLLYEM 229
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 126 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 182
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 183 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 150 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 206
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 207 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 104/253 (41%), Gaps = 38/253 (15%)
Query: 154 DNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCE--DEHRVLIYEFMARGSVENNLFSKV 211
D S + R++ E L SHPN++ ++G C H LI +M GS+ N L
Sbjct: 45 DWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGT 104
Query: 212 LLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLS--DFGLAKD 269
+ S +K A A+G+AFLH E + + ++++D D A++S D +
Sbjct: 105 NFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164
Query: 270 GPEGDKSHVSTRIMGTYGYAAPEYIMTG-HLTPR--SDVYSFGVVLLEILTGRKSLDKSR 326
P M + APE + T R +D++SF V+L E++T
Sbjct: 165 SPGR---------MYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVT--------- 206
Query: 327 PAREQNLADWAXXXXXXXXXXXNIIDPRLEGDYPV--KGVH-KAAMLAYHCLNHNPKARP 383
RE AD + LEG P G+ + L C+N +P RP
Sbjct: 207 --REVPFADLSNMEIGMKVA--------LEGLRPTIPPGISPHVSKLMKICMNEDPAKRP 256
Query: 384 LMRDIVDSLEPLQ 396
IV LE +Q
Sbjct: 257 KFDMIVPILEKMQ 269
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V+TR
Sbjct: 159 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 215
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 216 ----WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 175 HPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFL 234
HP+++ LI L+++ M +G + + L KV L + I + ++FL
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKET--RSIMRSLLEAVSFL 216
Query: 235 HEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYI 294
H +++RD K NILLD + +LSDFG + G+K + GT GY APE +
Sbjct: 217 HANN--IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR---ELCGTPGYLAPEIL 271
Query: 295 MTGH------LTPRSDVYSFGVVLLEILTG 318
D+++ GV+L +L G
Sbjct: 272 KCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 15/195 (7%)
Query: 130 KGFISEDLREGLQPVPVA-VKVHDGDNSYQGHREWLAEVIFLGHLS---HPNLVKLIGYC 185
K F + DL+ G + V + V+V G+ + EV L HL HPN+V+L C
Sbjct: 26 KVFKARDLKNGGRFVALKRVRVQTGEEGMP--LSTIREVAVLRHLETFEHPNVVRLFDVC 83
Query: 186 C---EDEHRVLIYEFMARGSVENNLFSKVLLP-LPWSIRMKIAFGAAKGLAFLHEAEKPV 241
D L F KV P +P + F +GL FLH V
Sbjct: 84 TVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR--V 141
Query: 242 IYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTP 301
++RD K NIL+ + KL+DFGLA+ T ++ T Y APE ++
Sbjct: 142 VHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVVVTLWYRAPEVLLQSSYAT 198
Query: 302 RSDVYSFGVVLLEIL 316
D++S G + E+
Sbjct: 199 PVDLWSVGCIFAEMF 213
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 18/163 (11%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIR- 220
+++ E+ L HP +VKL+G D ++ EF G+V+ ++L L +
Sbjct: 62 DYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVD-----AIMLELDRGLTE 116
Query: 221 ---MKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+ + L FLH K +I+RD K N+L+ + + +L+DFG++ + +
Sbjct: 117 PQIQVVCRQMLEALNFLHS--KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR 174
Query: 278 VSTRIMGTYGYAAPEYIM--TGHLTP---RSDVYSFGVVLLEI 315
S +GT + APE +M T TP ++D++S G+ L+E+
Sbjct: 175 DS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 127 CVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCC 186
CV KG E R VAVK+ + RE E+ L H N++ I
Sbjct: 15 CVGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFRE--TEIYNTVLLRHDNILGFIASDM 72
Query: 187 EDEHRV----LIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLH------E 236
+ LI + GS+ + L + L P + +++A AA GLA LH +
Sbjct: 73 TSRNSSTQLWLITHYHEHGSLYDFLQRQTLEP---HLALRLAVSAACGLAHLHVEIFGTQ 129
Query: 237 AEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEG-DKSHVSTR-IMGTYGYAAPEYI 294
+ + +RDFK+ N+L+ ++ ++D GLA +G D + +GT Y APE +
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVL 189
Query: 295 MTGHLT------PRSDVYSFGVVLLEI 315
T +D+++FG+VL EI
Sbjct: 190 DEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 18/163 (11%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIR- 220
+++ E+ L HP +VKL+G D ++ EF G+V+ ++L L +
Sbjct: 54 DYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVD-----AIMLELDRGLTE 108
Query: 221 ---MKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSH 277
+ + L FLH K +I+RD K N+L+ + + +L+DFG++ + +
Sbjct: 109 PQIQVVCRQMLEALNFLHS--KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR 166
Query: 278 VSTRIMGTYGYAAPEYIM--TGHLTP---RSDVYSFGVVLLEI 315
S +GT + APE +M T TP ++D++S G+ L+E+
Sbjct: 167 DS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 225 FGA--AKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+GA L +LH +EK V+YRD K N++LD D + K++DFGL K EG K + +
Sbjct: 115 YGAEIVSALDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKX 170
Query: 283 M-GTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
GT Y APE + D + GVV+ E++ GR
Sbjct: 171 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 225 FGA--AKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+GA L +LH +EK V+YRD K N++LD D + K++DFGL K+G + +
Sbjct: 113 YGAEIVSALDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXF 169
Query: 283 MGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
GT Y APE + D + GVV+ E++ GR
Sbjct: 170 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 15/195 (7%)
Query: 130 KGFISEDLREGLQPVPVA-VKVHDGDNSYQGHREWLAEVIFLGHLS---HPNLVKLIGYC 185
K F + DL+ G + V + V+V G+ + EV L HL HPN+V+L C
Sbjct: 26 KVFKARDLKNGGRFVALKRVRVQTGEEGMP--LSTIREVAVLRHLETFEHPNVVRLFDVC 83
Query: 186 C---EDEHRVLIYEFMARGSVENNLFSKVLLP-LPWSIRMKIAFGAAKGLAFLHEAEKPV 241
D L F KV P +P + F +GL FLH V
Sbjct: 84 TVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR--V 141
Query: 242 IYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTP 301
++RD K NIL+ + KL+DFGLA+ T ++ T Y APE ++
Sbjct: 142 VHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVVVTLWYRAPEVLLQSSYAT 198
Query: 302 RSDVYSFGVVLLEIL 316
D++S G + E+
Sbjct: 199 PVDLWSVGCIFAEMF 213
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 225 FGA--AKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+GA L +LH +EK V+YRD K N++LD D + K++DFGL K+G + +
Sbjct: 114 YGAEIVSALDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXF 170
Query: 283 MGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
GT Y APE + D + GVV+ E++ GR
Sbjct: 171 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 81/159 (50%), Gaps = 10/159 (6%)
Query: 162 EWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRM 221
E++ E + +LSH LV+L G C + +I E+MA G + N L ++ +
Sbjct: 50 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLL 108
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
++ + + +L K ++RD N L++ K+SDFGL++ D + S+R
Sbjct: 109 EMCKDVCEAMEYLE--SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL--DDEYTSSR 164
Query: 282 IMGT---YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
G+ ++ PE +M + +SD+++FGV++ EI +
Sbjct: 165 --GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 81/191 (42%), Gaps = 19/191 (9%)
Query: 144 VPVAVKVHDGDNSYQGHREWLAEVIFLGHL-SHPNLVKLIGYCCEDEHRVLIYEFMARGS 202
+ VAVK+ ++E+ L +L +H N+V L+G C ++I E+ G
Sbjct: 77 MTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGD 136
Query: 203 VENNLFSK----------------VLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDF 246
+ N L K L L + ++ AKG+AFL A K I+RD
Sbjct: 137 LLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL--ASKNCIHRDL 194
Query: 247 KTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVY 306
NILL K+ DFGLA+ V + APE I T SDV+
Sbjct: 195 AARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVW 254
Query: 307 SFGVVLLEILT 317
S+G+ L E+ +
Sbjct: 255 SYGIFLWELFS 265
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ D+GLA+ + +V+TR
Sbjct: 130 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR- 186
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + V+TR
Sbjct: 130 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR- 186
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + V+TR
Sbjct: 130 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR- 186
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + V+TR
Sbjct: 130 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR- 186
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 11/158 (6%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L EV L L HPN+ KL + + + L+ E G + + + S+ + R I
Sbjct: 74 LREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--I 131
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDKSHVST 280
G+ + H + +++RD K N+LL++ D N ++ DFGL+ + S
Sbjct: 132 IRQVLSGITYXH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKXK 186
Query: 281 RIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+GT Y APE ++ G + DV+S GV+L +L+G
Sbjct: 187 DKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 148 VKVHDGDNSYQGHREWL-AEVIFLGHLSHPNLVKLI-GYCCEDEHRVLIYEFMARGSVEN 205
V V D Q RE L EV+ + H N+V++ Y DE V + EF+ G++ +
Sbjct: 179 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV-VMEFLEGGALTD 237
Query: 206 NLFSKVLLPLPWSIRMK------IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNA 259
+ RM + + L+ LH + VI+RD K+ +ILL D
Sbjct: 238 ---------IVTHTRMNEEQIAAVCLAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRV 286
Query: 260 KLSDFG----LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEI 315
KLSDFG ++K+ P ++GT + APE I P D++S G++++E+
Sbjct: 287 KLSDFGFCAQVSKEVPR------RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 340
Query: 316 LTG 318
+ G
Sbjct: 341 VDG 343
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + V+TR
Sbjct: 126 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR- 182
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 183 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 228 AKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-IMGTY 286
A GL FL K +IYRD K N++LD++ + K++DFG+ K E V+T+ GT
Sbjct: 452 AIGLFFLQS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTP 506
Query: 287 GYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
Y APE I D ++FGV+L E+L G+
Sbjct: 507 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 7/177 (3%)
Query: 144 VPVAVKVHDGDNSYQ--GHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARG 201
V VAVK D Q +++ EV + L H NL++L G + ++ E G
Sbjct: 41 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLG 99
Query: 202 SVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKL 261
S+ + L L ++ + A A+G+ +L K I+RD N+LL T K+
Sbjct: 100 SLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKI 156
Query: 262 SDFGLAKDGPEGDKSHVSTRIMGT-YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
DFGL + P+ D +V + + APE + T + SD + FGV L E+ T
Sbjct: 157 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 89/174 (51%), Gaps = 10/174 (5%)
Query: 146 VAVK-VHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVE 204
VA+K + +G S E++ E + +LSH LV+L G C + +I E+MA G +
Sbjct: 51 VAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 107
Query: 205 NNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDF 264
N L ++ +++ + + +L K ++RD N L++ K+SDF
Sbjct: 108 NYL-REMRHRFQTQQLLEMCKDVCEAMEYLE--SKQFLHRDLAARNCLVNDQGVVKVSDF 164
Query: 265 GLAKDGPEGDK-SHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
GL++ + ++ S V ++ ++ PE +M + +SD+++FGV++ EI +
Sbjct: 165 GLSRYVLDDEETSSVGSKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIR--MKI 223
E+ L + HPN+V L H LI + ++ G LF +++ ++ R ++
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGG----ELFDRIVEKGFYTERDASRL 121
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNIL---LDTDYNAKLSDFGLAKDGPEGDKSHVST 280
F + +LH+ +++RD K N+L LD D +SDFGL+K D V +
Sbjct: 122 IFQVLDAVKYLHDL--GIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLS 176
Query: 281 RIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
GT GY APE + + D +S GV+ +L G
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + V+TR
Sbjct: 150 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR- 206
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 207 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 148 VKVHDGDNSYQGHREWL-AEVIFLGHLSHPNLVKLI-GYCCEDEHRVLIYEFMARGSVEN 205
V V D Q RE L EV+ + H N+V++ Y DE V + EF+ G++ +
Sbjct: 57 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV-VMEFLEGGALTD 115
Query: 206 NLFSKVLLPLPWSIRMK------IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNA 259
+ RM + + L+ LH + VI+RD K+ +ILL D
Sbjct: 116 ---------IVTHTRMNEEQIAAVCLAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRV 164
Query: 260 KLSDFG----LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEI 315
KLSDFG ++K+ P ++GT + APE I P D++S G++++E+
Sbjct: 165 KLSDFGFCAQVSKEVPR------RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 218
Query: 316 LTG 318
+ G
Sbjct: 219 VDG 221
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIR--MKI 223
E+ L + HPN+V L H LI + ++ G LF +++ ++ R ++
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGG----ELFDRIVEKGFYTERDASRL 121
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNIL---LDTDYNAKLSDFGLAKDGPEGDKSHVST 280
F + +LH+ +++RD K N+L LD D +SDFGL+K D V +
Sbjct: 122 IFQVLDAVKYLHDL--GIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLS 176
Query: 281 RIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
GT GY APE + + D +S GV+ +L G
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIR--MKI 223
E+ L + HPN+V L H LI + ++ G LF +++ ++ R ++
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGG----ELFDRIVEKGFYTERDASRL 121
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNIL---LDTDYNAKLSDFGLAKDGPEGDKSHVST 280
F + +LH+ +++RD K N+L LD D +SDFGL+K D V +
Sbjct: 122 IFQVLDAVKYLHDL--GIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLS 176
Query: 281 RIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
GT GY APE + + D +S GV+ +L G
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 148 VKVHDGDNSYQGHREWL-AEVIFLGHLSHPNLVKLI-GYCCEDEHRVLIYEFMARGSVEN 205
V V D Q RE L EV+ + H N+V++ Y DE V + EF+ G++ +
Sbjct: 59 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV-VMEFLEGGALTD 117
Query: 206 NLFSKVLLPLPWSIRMK------IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNA 259
+ RM + + L+ LH + VI+RD K+ +ILL D
Sbjct: 118 ---------IVTHTRMNEEQIAAVCLAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRV 166
Query: 260 KLSDFG----LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEI 315
KLSDFG ++K+ P ++GT + APE I P D++S G++++E+
Sbjct: 167 KLSDFGFCAQVSKEVPR------RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 220
Query: 316 LTG 318
+ G
Sbjct: 221 VDG 223
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 7/177 (3%)
Query: 144 VPVAVKVHDGDNSYQ--GHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARG 201
V VAVK D Q +++ EV + L H NL++L G + ++ E G
Sbjct: 37 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLG 95
Query: 202 SVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKL 261
S+ + L L ++ + A A+G+ +L K I+RD N+LL T K+
Sbjct: 96 SLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKI 152
Query: 262 SDFGLAKDGPEGDKSHVSTRIMGT-YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
DFGL + P+ D +V + + APE + T + SD + FGV L E+ T
Sbjct: 153 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIR--MKI 223
E+ L + HPN+V L H LI + ++ G LF +++ ++ R ++
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGG----ELFDRIVEKGFYTERDASRL 121
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNIL---LDTDYNAKLSDFGLAKDGPEGDKSHVST 280
F + +LH+ +++RD K N+L LD D +SDFGL+K D V +
Sbjct: 122 IFQVLDAVKYLHDL--GIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLS 176
Query: 281 RIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
GT GY APE + + D +S GV+ +L G
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 88/174 (50%), Gaps = 10/174 (5%)
Query: 146 VAVK-VHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVE 204
VA+K + +G S E++ E + +LSH LV+L G C + +I E+MA G +
Sbjct: 31 VAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 87
Query: 205 NNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDF 264
N L ++ +++ + + +L K ++RD N L++ K+SDF
Sbjct: 88 NYL-REMRHRFQTQQLLEMCKDVCEAMEYLE--SKQFLHRDLAARNCLVNDQGVVKVSDF 144
Query: 265 GLAKDGPEGD-KSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
GL++ + + S V ++ ++ PE +M + +SD+++FGV++ EI +
Sbjct: 145 GLSRYVLDDEYTSSVGSKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 88/174 (50%), Gaps = 10/174 (5%)
Query: 146 VAVK-VHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVE 204
VA+K + +G S E++ E + +LSH LV+L G C + +I E+MA G +
Sbjct: 35 VAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 91
Query: 205 NNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDF 264
N L ++ +++ + + +L K ++RD N L++ K+SDF
Sbjct: 92 NYL-REMRHRFQTQQLLEMCKDVCEAMEYLE--SKQFLHRDLAARNCLVNDQGVVKVSDF 148
Query: 265 GLAKDGPEGD-KSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
GL++ + + S V ++ ++ PE +M + +SD+++FGV++ EI +
Sbjct: 149 GLSRYVLDDEYTSSVGSKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMG 284
+ A L H + V+YRD K +NILLD + ++SD GLA D + K H S +G
Sbjct: 297 YAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-KKPHAS---VG 352
Query: 285 TYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTG 318
T+GY APE + G +D +S G +L ++L G
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMG 284
+ A L H + V+YRD K +NILLD + ++SD GLA D + K H S +G
Sbjct: 297 YAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-KKPHAS---VG 352
Query: 285 TYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTG 318
T+GY APE + G +D +S G +L ++L G
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 7/179 (3%)
Query: 142 QPVPVAVKVHDGDNSYQ--GHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMA 199
+ V VAVK D Q +++ EV + L H NL++L G + ++ E
Sbjct: 39 KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAP 97
Query: 200 RGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNA 259
GS+ + L L ++ + A A+G+ +L K I+RD N+LL T
Sbjct: 98 LGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLES--KRFIHRDLAARNLLLATRDLV 154
Query: 260 KLSDFGLAKDGPEGDKSHVSTRIMGT-YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
K+ DFGL + P+ D +V + + APE + T + SD + FGV L E+ T
Sbjct: 155 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 7/177 (3%)
Query: 144 VPVAVKVHDGDNSYQ--GHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARG 201
V VAVK D Q +++ EV + L H NL++L G + ++ E G
Sbjct: 47 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLG 105
Query: 202 SVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKL 261
S+ + L L ++ + A A+G+ +L K I+RD N+LL T K+
Sbjct: 106 SLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKI 162
Query: 262 SDFGLAKDGPEGDKSHVSTRIMGT-YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
DFGL + P+ D +V + + APE + T + SD + FGV L E+ T
Sbjct: 163 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 228 AKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM-GTY 286
A GL FL K +IYRD K N++LD++ + K++DFG+ K E V+T+ GT
Sbjct: 131 AIGLFFLQS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTP 185
Query: 287 GYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
Y APE I D ++FGV+L E+L G+
Sbjct: 186 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 7/179 (3%)
Query: 142 QPVPVAVKVHDGDNSYQ--GHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMA 199
+ V VAVK D Q +++ EV + L H NL++L G + ++ E
Sbjct: 35 KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAP 93
Query: 200 RGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNA 259
GS+ + L L ++ + A A+G+ +L K I+RD N+LL T
Sbjct: 94 LGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLES--KRFIHRDLAARNLLLATRDLV 150
Query: 260 KLSDFGLAKDGPEGDKSHVSTRIMGT-YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
K+ DFGL + P+ D +V + + APE + T + SD + FGV L E+ T
Sbjct: 151 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMG 284
+ A L H + V+YRD K +NILLD + ++SD GLA D + K H S +G
Sbjct: 296 YAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-KKPHAS---VG 351
Query: 285 TYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTG 318
T+GY APE + G +D +S G +L ++L G
Sbjct: 352 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYA 289
GL LH+ + +IYRD K N+LLD D N ++SD GLA + G + GT G+
Sbjct: 301 GLEHLHQ--RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFM 356
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
APE ++ D ++ GV L E++ R
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMG 284
+ A L H + V+YRD K +NILLD + ++SD GLA D + K H S +G
Sbjct: 297 YAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-KKPHAS---VG 352
Query: 285 TYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTG 318
T+GY APE + G +D +S G +L ++L G
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYA 289
GL LH+ + +IYRD K N+LLD D N ++SD GLA + G + GT G+
Sbjct: 301 GLEHLHQ--RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFM 356
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
APE ++ D ++ GV L E++ R
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 88/174 (50%), Gaps = 10/174 (5%)
Query: 146 VAVK-VHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVE 204
VA+K + +G S E++ E + +LSH LV+L G C + +I E+MA G +
Sbjct: 36 VAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 92
Query: 205 NNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDF 264
N L ++ +++ + + +L K ++RD N L++ K+SDF
Sbjct: 93 NYL-REMRHRFQTQQLLEMCKDVCEAMEYLE--SKQFLHRDLAARNCLVNDQGVVKVSDF 149
Query: 265 GLAKDGPEGD-KSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
GL++ + + S V ++ ++ PE +M + +SD+++FGV++ EI +
Sbjct: 150 GLSRYVLDDEYTSSVGSKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYA 289
GL LH+ + +IYRD K N+LLD D N ++SD GLA + G + GT G+
Sbjct: 301 GLEHLHQ--RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFM 356
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
APE ++ D ++ GV L E++ R
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYA 289
GL LH+ + +IYRD K N+LLD D N ++SD GLA + G + GT G+
Sbjct: 301 GLEHLHQ--RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFM 356
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
APE ++ D ++ GV L E++ R
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 88/174 (50%), Gaps = 10/174 (5%)
Query: 146 VAVK-VHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVE 204
VA+K + +G S E++ E + +LSH LV+L G C + +I E+MA G +
Sbjct: 51 VAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 107
Query: 205 NNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDF 264
N L ++ +++ + + +L K ++RD N L++ K+SDF
Sbjct: 108 NYL-REMRHRFQTQQLLEMCKDVCEAMEYLE--SKQFLHRDLAARNCLVNDQGVVKVSDF 164
Query: 265 GLAKDGPEGD-KSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
GL++ + + S V ++ ++ PE +M + +SD+++FGV++ EI +
Sbjct: 165 GLSRYVLDDEYTSSVGSKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 148 VKVHDGDNSYQGHREWL-AEVIFLGHLSHPNLVKLI-GYCCEDEHRVLIYEFMARGSVEN 205
V V D Q RE L EV+ + H N+V++ Y DE V + EF+ G++ +
Sbjct: 48 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV-VMEFLEGGALTD 106
Query: 206 NLFSKVLLPLPWSIRMK------IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNA 259
+ RM + + L+ LH + VI+RD K+ +ILL D
Sbjct: 107 ---------IVTHTRMNEEQIAAVCLAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRV 155
Query: 260 KLSDFG----LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEI 315
KLSDFG ++K+ P ++GT + APE I P D++S G++++E+
Sbjct: 156 KLSDFGFCAQVSKEVPR------RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 209
Query: 316 LTG 318
+ G
Sbjct: 210 VDG 212
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 148 VKVHDGDNSYQGHREWL-AEVIFLGHLSHPNLVKLI-GYCCEDEHRVLIYEFMARGSVEN 205
V V D Q RE L EV+ + H N+V++ Y DE V + EF+ G++ +
Sbjct: 102 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV-VMEFLEGGALTD 160
Query: 206 NLFSKVLLPLPWSIRMK------IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNA 259
+ RM + + L+ LH + VI+RD K+ +ILL D
Sbjct: 161 ---------IVTHTRMNEEQIAAVCLAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRV 209
Query: 260 KLSDFG----LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEI 315
KLSDFG ++K+ P ++GT + APE I P D++S G++++E+
Sbjct: 210 KLSDFGFCAQVSKEVPR------RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 263
Query: 316 LTG 318
+ G
Sbjct: 264 VDG 266
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 148 VKVHDGDNSYQGHREWL-AEVIFLGHLSHPNLVKLI-GYCCEDEHRVLIYEFMARGSVEN 205
V V D Q RE L EV+ + H N+V++ Y DE V + EF+ G++ +
Sbjct: 52 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV-VMEFLEGGALTD 110
Query: 206 NLFSKVLLPLPWSIRMK------IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNA 259
+ RM + + L+ LH + VI+RD K+ +ILL D
Sbjct: 111 ---------IVTHTRMNEEQIAAVCLAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRV 159
Query: 260 KLSDFG----LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEI 315
KLSDFG ++K+ P ++GT + APE I P D++S G++++E+
Sbjct: 160 KLSDFGFCAQVSKEVPR------RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 213
Query: 316 LTG 318
+ G
Sbjct: 214 VDG 216
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 13/185 (7%)
Query: 144 VPVAVKVHDGDN-SYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHR------VLIYE 196
V VAVK+ D + E+L E + HP++ KL+G + ++I
Sbjct: 52 VKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILP 111
Query: 197 FMARGSVENNLFSKVL----LPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNIL 252
FM G + L + + LP ++ A G+ +L + + I+RD N +
Sbjct: 112 FMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL--SSRNFIHRDLAARNCM 169
Query: 253 LDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
L D ++DFGL++ GD + A E + T SDV++FGV +
Sbjct: 170 LAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTM 229
Query: 313 LEILT 317
EI+T
Sbjct: 230 WEIMT 234
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 88/174 (50%), Gaps = 10/174 (5%)
Query: 146 VAVK-VHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVE 204
VA+K + +G S E++ E + +LSH LV+L G C + +I E+MA G +
Sbjct: 42 VAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 98
Query: 205 NNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDF 264
N L ++ +++ + + +L K ++RD N L++ K+SDF
Sbjct: 99 NYL-REMRHRFQTQQLLEMCKDVCEAMEYLE--SKQFLHRDLAARNCLVNDQGVVKVSDF 155
Query: 265 GLAKDGPEGD-KSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
GL++ + + S V ++ ++ PE +M + +SD+++FGV++ EI +
Sbjct: 156 GLSRYVLDDEYTSSVGSKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 23/176 (13%)
Query: 152 DGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKV 211
D N + H E E+ L L HPN++KL + ++ L+ EF G LF ++
Sbjct: 82 DNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGE----LFEQI 137
Query: 212 LLPLPWS--IRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTD---YNAKLSDFGL 266
+ + I G+ +LH+ +++RD K NILL+ N K+ DFGL
Sbjct: 138 INRHKFDECDAANIMKQILSGICYLHKH--NIVHRDIKPENILLENKNSLLNIKIVDFGL 195
Query: 267 ----AKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+KD D+ +GT Y APE ++ + DV+S GV++ +L G
Sbjct: 196 SSFFSKDYKLRDR-------LGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 7/177 (3%)
Query: 144 VPVAVKVHDGDNSYQ--GHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARG 201
V VAVK D Q +++ EV + L H NL++L G + ++ E G
Sbjct: 37 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLG 95
Query: 202 SVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKL 261
S+ + L L ++ + A A+G+ +L K I+RD N+LL T K+
Sbjct: 96 SLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKI 152
Query: 262 SDFGLAKDGPEGDKSHVSTRIMGT-YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
DFGL + P+ D V + + APE + T + SD + FGV L E+ T
Sbjct: 153 GDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 7/177 (3%)
Query: 144 VPVAVKVHDGDNSYQ--GHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARG 201
V VAVK D Q +++ EV + L H NL++L G + ++ E G
Sbjct: 47 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLG 105
Query: 202 SVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKL 261
S+ + L L ++ + A A+G+ +L K I+RD N+LL T K+
Sbjct: 106 SLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKI 162
Query: 262 SDFGLAKDGPEGDKSHVSTRIMGT-YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
DFGL + P+ D V + + APE + T + SD + FGV L E+ T
Sbjct: 163 GDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ FGLA+ + +V+TR
Sbjct: 130 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR- 186
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Query: 170 LGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAK 229
+ L HP VKL +C +D+ ++ + +N K + + F A+
Sbjct: 91 MSRLDHPFFVKLY-FCFQDDEKL----YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 145
Query: 230 ---GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTY 286
L +LH K +I+RD K NILL+ D + +++DFG AK K + +GT
Sbjct: 146 IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 203
Query: 287 GYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
Y +PE + SD+++ G ++ +++ G
Sbjct: 204 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 79/184 (42%), Gaps = 17/184 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKL------IGYCCEDEHRVLIYEFMA 199
VA+K + S + W E+ + L+HPN+V + ++ +L E+
Sbjct: 43 VAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCE 102
Query: 200 RGSVEN--NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDY 257
G + N F IR ++ + L +LHE +I+RD K NI+L
Sbjct: 103 GGDLRKYLNQFENCCGLKEGPIRTLLS-DISSALRYLHENR--IIHRDLKPENIVLQPGP 159
Query: 258 NA---KLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLE 314
K+ D G AK E D+ + T +GT Y APE + T D +SFG + E
Sbjct: 160 QRLIHKIIDLGYAK---ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFE 216
Query: 315 ILTG 318
+TG
Sbjct: 217 CITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 79/184 (42%), Gaps = 17/184 (9%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKL------IGYCCEDEHRVLIYEFMA 199
VA+K + S + W E+ + L+HPN+V + ++ +L E+
Sbjct: 42 VAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCE 101
Query: 200 RGSVEN--NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDY 257
G + N F IR ++ + L +LHE +I+RD K NI+L
Sbjct: 102 GGDLRKYLNQFENCCGLKEGPIRTLLS-DISSALRYLHENR--IIHRDLKPENIVLQPGP 158
Query: 258 NA---KLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLE 314
K+ D G AK E D+ + T +GT Y APE + T D +SFG + E
Sbjct: 159 QRLIHKIIDLGYAK---ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFE 215
Query: 315 ILTG 318
+TG
Sbjct: 216 CITG 219
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 15/160 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIR--M 221
L EV L L HPN++KL + ++ E G LF +++ +S
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE----LFDEIIKRKRFSEHDAA 124
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDKSHV 278
+I G+ ++H + +++RD K NILL++ D + K+ DFGL+ + K +
Sbjct: 125 RIIKQVFSGITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--M 180
Query: 279 STRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
RI GT Y APE ++ G + DV+S GV+L +L+G
Sbjct: 181 KDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 241 VIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHL- 299
V++RD K N+LLD NAK++DFGL+ +G+ S G+ YAAPE +++G L
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPE-VISGRLY 187
Query: 300 -TPRSDVYSFGVVLLEILTGRKSLD 323
P D++S GV+L +L G D
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VA+K + + E L E+ + HPN+V + L+ + ++ GSV +
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 206 NLFSKVLLP------LPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNA 259
+ V L S I +GL +LH+ + I+RD K NILL D +
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSV 155
Query: 260 KLSDFGLA---KDGPEGDKSHVSTRIMGTYGYAAPEYI--MTGHLTPRSDVYSFGVVLLE 314
+++DFG++ G + ++ V +GT + APE + + G+ ++D++SFG+ +E
Sbjct: 156 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIE 214
Query: 315 ILTGRKSLDKSRPAR 329
+ TG K P +
Sbjct: 215 LATGAAPYHKYPPMK 229
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN 205
VA+K + + E L E+ + HPN+V + L+ + ++ GSV +
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 206 NLFSKVLLP------LPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNA 259
+ V L S I +GL +LH+ + I+RD K NILL D +
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSV 160
Query: 260 KLSDFGLA---KDGPEGDKSHVSTRIMGTYGYAAPEYI--MTGHLTPRSDVYSFGVVLLE 314
+++DFG++ G + ++ V +GT + APE + + G+ ++D++SFG+ +E
Sbjct: 161 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIE 219
Query: 315 ILTGRKSLDKSRPAR 329
+ TG K P +
Sbjct: 220 LATGAAPYHKYPPMK 234
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ D GLA+ + +V+TR
Sbjct: 130 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR- 186
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 15/160 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIR--M 221
L EV L L HPN++KL + ++ E G LF +++ +S
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG----ELFDEIIKRKRFSEHDAA 124
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDKSHV 278
+I G+ ++H+ +++RD K NILL++ D + K+ DFGL+ + K +
Sbjct: 125 RIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--M 180
Query: 279 STRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
RI GT Y APE ++ G + DV+S GV+L +L+G
Sbjct: 181 KDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 15/160 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIR--M 221
L EV L L HPN++KL + ++ E G LF +++ +S
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG----ELFDEIIKRKRFSEHDAA 124
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDKSHV 278
+I G+ ++H+ +++RD K NILL++ D + K+ DFGL+ + K +
Sbjct: 125 RIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--M 180
Query: 279 STRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
RI GT Y APE ++ G + DV+S GV+L +L+G
Sbjct: 181 KDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ DF LA+ + +V+TR
Sbjct: 130 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR- 186
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ D GLA+ + +V+TR
Sbjct: 130 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR- 186
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 225 FGA--AKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+GA L +LH + V+YRD K N++LD D + K++DFGL K+G D + + T
Sbjct: 113 YGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI-SDGATMKT-F 168
Query: 283 MGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
GT Y APE + D + GVV+ E++ GR
Sbjct: 169 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 225 FGA--AKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+GA L +LH + V+YRD K N++LD D + K++DFGL K+G D + + T
Sbjct: 110 YGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI-SDGATMKT-F 165
Query: 283 MGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
GT Y APE + D + GVV+ E++ GR
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 97/234 (41%), Gaps = 39/234 (16%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSK--VLLP----LPWSI 219
EV L ++ HPN+V+ E+ ++ ++ G + + ++ VL L W +
Sbjct: 73 EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFV 132
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
++ LA H ++ +++RD K+ NI L D +L DFG+A+ ++
Sbjct: 133 QI--------CLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIAR--VLNSTVELA 182
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXX 339
+GT Y +PE +SD+++ G VL E+ T + + +
Sbjct: 183 RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG-------------- 228
Query: 340 XXXXXXXXXNIIDPRLEGDYPVKGVHKA---AMLAYHCLNHNPKARPLMRDIVD 390
N++ + G +P +H + L NP+ RP + I++
Sbjct: 229 ------SMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 225 FGA--AKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+GA L +LH + V+YRD K N++LD D + K++DFGL K+G D + + T
Sbjct: 110 YGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI-SDGATMKT-F 165
Query: 283 MGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
GT Y APE + D + GVV+ E++ GR
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+ + +GL ++H A+ +I+RD K SN+ ++ D K+ D GLA+ + +V+TR
Sbjct: 130 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR- 186
Query: 283 MGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVEN-NLFSKVLLPLPWSIRMK 222
+ E+ L L H NLV L+ C + + L++EF+ +++ LF L + + K
Sbjct: 72 MREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPN---GLDYQVVQK 128
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
F G+ F H +I+RD K NIL+ KL DFG A+ V
Sbjct: 129 YLFQIINGIGFCHSHN--IIHRDIKPENILVSQSGVVKLCDFGFAR--TLAAPGEVYDDE 184
Query: 283 MGTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTG 318
+ T Y APE ++ ++ DV++ G ++ E+ G
Sbjct: 185 VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 21/163 (12%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWS----- 218
L EV L L HPN++KL + + + L+ E G LF +++L +S
Sbjct: 52 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGG----ELFDEIILRQKFSEVDAA 107
Query: 219 IRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDK 275
+ MK G +LH + +++RD K N+LL++ D K+ DFGL+ G K
Sbjct: 108 VIMKQVLS---GTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK 162
Query: 276 SHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ R +GT Y APE ++ + DV+S GV+L +L G
Sbjct: 163 --MKER-LGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 67/159 (42%), Gaps = 10/159 (6%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
E+ HL HPN++++ Y + + L+ EF RG + L S
Sbjct: 65 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL 124
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM-G 284
A L + H E+ VI+RD K N+L+ K++DFG + P + R M G
Sbjct: 125 --ADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCG 175
Query: 285 TYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLD 323
T Y PE I + D++ GV+ E L G D
Sbjct: 176 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 82/164 (50%), Gaps = 20/164 (12%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
E+ HL H N+V+ +G E+ + E + GS+ L SK PL + I F
Sbjct: 69 EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSK-WGPLKDN-EQTIGF 126
Query: 226 GAAK---GLAFLHEAEKPVIYRDFKTSNILLDTDYNA--KLSDFGLAKDGPEGDKSHVST 280
+ GL +LH+ + +++RD K N+L++T Y+ K+SDFG +K + +
Sbjct: 127 YTKQILEGLKYLHDNQ--IVHRDIKGDNVLINT-YSGVLKISDFGTSKR--LAGINPCTE 181
Query: 281 RIMGTYGYAAPEYIMTGHLTPR-----SDVYSFGVVLLEILTGR 319
GT Y APE I G PR +D++S G ++E+ TG+
Sbjct: 182 TFTGTLQYMAPEIIDKG---PRGYGKAADIWSLGCTIIEMATGK 222
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 67/159 (42%), Gaps = 10/159 (6%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
E+ HL HPN++++ Y + + L+ EF RG + L S
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL 123
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM-G 284
A L + H E+ VI+RD K N+L+ K++DFG + P + R M G
Sbjct: 124 --ADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCG 174
Query: 285 TYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLD 323
T Y PE I + D++ GV+ E L G D
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 67/159 (42%), Gaps = 10/159 (6%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
E+ HL HPN++++ Y + + L+ EF RG + L S
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL 123
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM-G 284
A L + H E+ VI+RD K N+L+ K++DFG + P + R M G
Sbjct: 124 --ADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCG 174
Query: 285 TYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLD 323
T Y PE I + D++ GV+ E L G D
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWS----- 218
L EV L L HPN++KL + + + L+ E G LF +++L +S
Sbjct: 69 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGG----ELFDEIILRQKFSEVDAA 124
Query: 219 IRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDK 275
+ MK G +LH+ +++RD K N+LL++ D K+ DFGL+ G K
Sbjct: 125 VIMKQVLS---GTTYLHKHN--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK 179
Query: 276 SHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+GT Y APE ++ + DV+S GV+L +L G
Sbjct: 180 ---MKERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 196 EFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT 255
EF +G++E + + L + +++ KG+ ++H K +I+RD K SNI L
Sbjct: 114 EFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS--KKLIHRDLKPSNIFLVD 171
Query: 256 DYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEI 315
K+ DFGL K TR GT Y +PE I + D+Y+ G++L E+
Sbjct: 172 TKQVKIGDFGLVTSLKNDGKR---TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228
Query: 316 L 316
L
Sbjct: 229 L 229
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 13/178 (7%)
Query: 146 VAVKV--HDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIG--YCCEDEHRVLIYEFMARG 201
VAVK H G + R++ E+ L L +VK G Y + L+ E++ G
Sbjct: 42 VAVKQLQHSGPDQ---QRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 98
Query: 202 SVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKL 261
+ + L + L S + + KG+ +L + ++RD NIL++++ + K+
Sbjct: 99 CLRDFL-QRHRARLDASRLLLYSSQICKGMEYL--GSRRCVHRDLAARNILVESEAHVKI 155
Query: 262 SDFGLAKDGPEGDKSHVSTRIMGT--YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+DFGLAK P DK + R G + APE + + +SDV+SFGVVL E+ T
Sbjct: 156 ADFGLAKLLPL-DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 33/210 (15%)
Query: 134 SEDLREGLQPVPVAVKVHDG-DNSYQGHREWLAEVIFLGHLS-HPNLVKLIGYCCEDEHR 191
S D R G V K+ D NS R + E++ L LS H N+V L+ D R
Sbjct: 28 SIDRRTG--EVVAVKKIFDAFQNSTDAQRTF-REIMILTELSGHENIVNLLNVLRADNDR 84
Query: 192 --VLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTS 249
L++++M + + + +L P+ + + + K + +LH +++RD K S
Sbjct: 85 DVYLVFDYM-ETDLHAVIRANILEPVH---KQYVVYQLIKVIKYLHSG--GLLHRDMKPS 138
Query: 250 NILLDTDYNAKLSDFGLAK-----------------DGPEG--DKSHVSTRIMGTYGYAA 290
NILL+ + + K++DFGL++ + E D + T + T Y A
Sbjct: 139 NILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRA 198
Query: 291 PEYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
PE ++ + T D++S G +L EIL G+
Sbjct: 199 PEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 241 VIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHL- 299
V++RD K N+LLD NAK++DFGL+ +G+ S G+ YAAPE +++G L
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNYAAPE-VISGRLY 187
Query: 300 -TPRSDVYSFGVVLLEILTGRKSLD 323
P D++S GV+L +L G D
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 30/183 (16%)
Query: 148 VKVHDGDNSYQGHREWL-AEVIFLGHLSHPNLVKLIG-YCCEDEHRVLIYEFMARGSVEN 205
V V D Q RE L EV+ + H N+V + Y DE V++ EF+ G++ +
Sbjct: 73 VAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVM-EFLEGGALTD 131
Query: 206 NLFSKVLLPLPWSIRMK------IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNA 259
+ RM + + L++LH + VI+RD K+ +ILL +D
Sbjct: 132 ---------IVTHTRMNEEQIATVCLSVLRALSYLHN--QGVIHRDIKSDSILLTSDGRI 180
Query: 260 KLSDFG----LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEI 315
KLSDFG ++K+ P+ ++GT + APE I D++S G++++E+
Sbjct: 181 KLSDFGFCAQVSKEVPK------RKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEM 234
Query: 316 LTG 318
+ G
Sbjct: 235 IDG 237
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 107/247 (43%), Gaps = 37/247 (14%)
Query: 93 DSAANPLIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVK--- 149
++A LIA EL + + + R + V G SE +PVA+K
Sbjct: 7 EAAMRDLIA----ELHAMQSPYTVQRFISSGSYGAVCAGVDSEG-------IPVAIKRVF 55
Query: 150 --VHDG------DNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDE----HRVLIYEF 197
V DG +S+ R L E+ L H HPN++ L E H++ +
Sbjct: 56 NTVSDGRTVNILSDSFLCKR-VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTE 114
Query: 198 MARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDY 257
+ R + + + ++ P I+ + GL LHEA V++RD NILL +
Sbjct: 115 LMRTDLAQVIHDQRIVISPQHIQY-FMYHILLGLHVLHEA--GVVHRDLHPGNILLADNN 171
Query: 258 NAKLSDFGLAK-DGPEGDKSHVSTRIMGTYGYAAPEYIMT-GHLTPRSDVYSFGVVLLEI 315
+ + DF LA+ D + +K+H T Y APE +M T D++S G V+ E+
Sbjct: 172 DITICDFNLAREDTADANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEM 227
Query: 316 LTGRKSL 322
RK+L
Sbjct: 228 F-NRKAL 233
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + L+ E M + NL + + L
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQMELDHER 127
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ S +
Sbjct: 128 MSYLLYQMLXGIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMM 182
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT------GRKSLDKSRPAREQ 331
T + T Y APE I+ D++S G ++ E++ GR +D+ EQ
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 13/178 (7%)
Query: 146 VAVKV--HDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIG--YCCEDEHRVLIYEFMARG 201
VAVK H G + R++ E+ L L +VK G Y + L+ E++ G
Sbjct: 55 VAVKQLQHSGPDQ---QRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 111
Query: 202 SVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKL 261
+ + L + L S + + KG+ +L + ++RD NIL++++ + K+
Sbjct: 112 CLRDFL-QRHRARLDASRLLLYSSQICKGMEYL--GSRRCVHRDLAARNILVESEAHVKI 168
Query: 262 SDFGLAKDGPEGDKSHVSTRIMGT--YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+DFGLAK P DK + R G + APE + + +SDV+SFGVVL E+ T
Sbjct: 169 ADFGLAKLLPL-DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 13/178 (7%)
Query: 146 VAVKV--HDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIG--YCCEDEHRVLIYEFMARG 201
VAVK H G + R++ E+ L L +VK G Y + L+ E++ G
Sbjct: 43 VAVKQLQHSGPDQ---QRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 99
Query: 202 SVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKL 261
+ + L + L S + + KG+ +L + ++RD NIL++++ + K+
Sbjct: 100 CLRDFL-QRHRARLDASRLLLYSSQICKGMEYL--GSRRCVHRDLAARNILVESEAHVKI 156
Query: 262 SDFGLAKDGPEGDKSHVSTRIMGT--YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+DFGLAK P DK + R G + APE + + +SDV+SFGVVL E+ T
Sbjct: 157 ADFGLAKLLPL-DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 225 FGA--AKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+GA L +LH + V+YRD K N++LD D + K++DFGL K+G +
Sbjct: 110 YGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXF 165
Query: 283 MGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
GT Y APE + D + GVV+ E++ GR
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 82/164 (50%), Gaps = 20/164 (12%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
E+ HL H N+V+ +G E+ + E + GS+ L SK PL + I F
Sbjct: 55 EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSK-WGPLKDN-EQTIGF 112
Query: 226 GAAK---GLAFLHEAEKPVIYRDFKTSNILLDTDYNA--KLSDFGLAKDGPEGDKSHVST 280
+ GL +LH+ + +++RD K N+L++T Y+ K+SDFG +K + +
Sbjct: 113 YTKQILEGLKYLHDNQ--IVHRDIKGDNVLINT-YSGVLKISDFGTSKR--LAGINPCTE 167
Query: 281 RIMGTYGYAAPEYIMTGHLTPR-----SDVYSFGVVLLEILTGR 319
GT Y APE I G PR +D++S G ++E+ TG+
Sbjct: 168 TFTGTLQYMAPEIIDKG---PRGYGKAADIWSLGCTIIEMATGK 208
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 225 FGA--AKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+GA L +LH + V+YRD K N++LD D + K++DFGL K+G +
Sbjct: 115 YGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXF 170
Query: 283 MGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
GT Y APE + D + GVV+ E++ GR
Sbjct: 171 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 107/247 (43%), Gaps = 37/247 (14%)
Query: 93 DSAANPLIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVK--- 149
++A LIA EL + + + R + V G SE +PVA+K
Sbjct: 7 EAAMRDLIA----ELHAMQSPYTVQRFISSGSYGAVCAGVDSEG-------IPVAIKRVF 55
Query: 150 --VHDG------DNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDE----HRVLIYEF 197
V DG +S+ R L E+ L H HPN++ L E H++ +
Sbjct: 56 NTVSDGRTVNILSDSFLCKR-VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTE 114
Query: 198 MARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDY 257
+ R + + + ++ P I+ + GL LHEA V++RD NILL +
Sbjct: 115 LMRTDLAQVIHDQRIVISPQHIQY-FMYHILLGLHVLHEA--GVVHRDLHPGNILLADNN 171
Query: 258 NAKLSDFGLAK-DGPEGDKSHVSTRIMGTYGYAAPEYIMT-GHLTPRSDVYSFGVVLLEI 315
+ + DF LA+ D + +K+H T Y APE +M T D++S G V+ E+
Sbjct: 172 DITICDFNLAREDTADANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEM 227
Query: 316 LTGRKSL 322
RK+L
Sbjct: 228 F-NRKAL 233
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 231 LAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAA 290
LA H + +IYRD K NILLD++ + L+DFGL+K+ D++ + GT Y A
Sbjct: 170 LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV-ADETERAYDFCGTIEYMA 228
Query: 291 PEYIM---TGHLTPRSDVYSFGVVLLEILTG 318
P+ + +GH D +S GV++ E+LTG
Sbjct: 229 PDIVRGGDSGH-DKAVDWWSLGVLMYELLTG 258
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 16/159 (10%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + ++ E M + NL + + L
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-----DANLSQVIQMELDHER 127
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ S +
Sbjct: 128 MSYLLYQMLVGIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMM 182
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
T + T Y APE I+ D++S GV++ E++ G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLP---WSIRM 221
E+ L +P++V G+ +D+ ++ E R S+ + + P + +R
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ 150
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
I +G+ +LH VI+RD K N+ L+ D + K+ DFGLA E D T
Sbjct: 151 TI-----QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATK-IEFDGERKKT- 201
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKS 325
+ GT Y APE + + D++S G +L +L G+ + S
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 225 FGA--AKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+GA L +LH + V+YRD K N++LD D + K++DFGL K+G +
Sbjct: 110 YGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXF 165
Query: 283 MGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
GT Y APE + D + GVV+ E++ GR
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 18/162 (11%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCE--DEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
E+ L L HPN+VKL+ + ++H +++E + +G V + L PL
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV---MEVPTLKPLSEDQARFY 142
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
KG+ +LH + +I+RD K SN+L+ D + K++DFG++ + D + + +
Sbjct: 143 FQDLIKGIEYLHYQK--IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTV 198
Query: 284 GTYGYAAPEY------IMTGHLTPRSDVYSFGVVLLEILTGR 319
GT + APE I +G DV++ GV L + G+
Sbjct: 199 GTPAFMAPESLSETRKIFSGKAL---DVWAMGVTLYCFVFGQ 237
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 225 FGA--AKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRI 282
+GA L +LH + V+YRD K N++LD D + K++DFGL K+G +
Sbjct: 110 YGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXF 165
Query: 283 MGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
GT Y APE + D + GVV+ E++ GR
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 18/157 (11%)
Query: 170 LGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPW----SIRMKIAF 225
+ + P +V+L +D++ ++ E+M G + N L S +P W + + +A
Sbjct: 129 MAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLAL 187
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A + +H RD K N+LLD + KL+DFG E H T + GT
Sbjct: 188 DAIHSMGLIH--------RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GT 238
Query: 286 YGYAAPEYIMT----GHLTPRSDVYSFGVVLLEILTG 318
Y +PE + + G+ D +S GV L E+L G
Sbjct: 239 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 16/159 (10%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + ++ E M + NL + + L
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-----DANLSQVIQMELDHER 127
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ S +
Sbjct: 128 MSYLLYQMLVGIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMM 182
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
T + T Y APE I+ D++S GV++ E++ G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 20/162 (12%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHR------VLIYEFMARGSVENNLFSKVLLPLPWSI 219
E+ L H+ H N++ L+ DE L+ FM G+ L L
Sbjct: 74 ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLG---ED 128
Query: 220 RMK-IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHV 278
R++ + + KGL ++H A +I+RD K N+ ++ D K+ DFGLA+ V
Sbjct: 129 RIQFLVYQMLKGLRYIHAA--GIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXV 186
Query: 279 STRIMGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
TR Y APE I+ T D++S G ++ E++TG+
Sbjct: 187 VTR-----WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
+F AKG+ FL A + I+RD NILL K+ DFGLA+D +
Sbjct: 204 SFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 261
Query: 284 GTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+ APE I T +SDV+SFGV+L EI +
Sbjct: 262 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
+F AKG+ FL A + I+RD NILL K+ DFGLA+D +
Sbjct: 197 SFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 254
Query: 284 GTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+ APE I T +SDV+SFGV+L EI +
Sbjct: 255 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
+F AKG+ FL A + I+RD NILL K+ DFGLA+D +
Sbjct: 199 SFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 256
Query: 284 GTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+ APE I T +SDV+SFGV+L EI +
Sbjct: 257 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKD--GPEGDKSHVSTRIMGTY 286
+GL ++H A+ VI+RD K SN+L++ + K+ DFG+A+ + + T + T
Sbjct: 170 RGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 227
Query: 287 GYAAPEYIMTGH-LTPRSDVYSFGVVLLEILTGRK 320
Y APE +++ H T D++S G + E+L R+
Sbjct: 228 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + L+ E M + NL + + L
Sbjct: 66 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQMELDHER 120
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ S +
Sbjct: 121 MSYLLYQMLXGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMM 175
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT------GRKSLDKSRPAREQ 331
T + T Y APE I+ D++S G ++ E++ GR +D+ EQ
Sbjct: 176 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
+F AKG+ FL A + I+RD NILL K+ DFGLA+D +
Sbjct: 206 SFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 263
Query: 284 GTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+ APE I T +SDV+SFGV+L EI +
Sbjct: 264 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + L+ E M + NL + + L
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQMELDHER 127
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ S +
Sbjct: 128 MSYLLYQMLXGIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMM 182
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT------GRKSLDKSRPAREQ 331
T + T Y APE I+ D++S G ++ E++ GR +D+ EQ
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 7/160 (4%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E+ L L H N+V+L D+ L++EF + F L I
Sbjct: 49 LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDL--KKYFDSCNGDLDPEIVKSF 106
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
F KGL F H + V++RD K N+L++ + KL+DFGLA+ G + +
Sbjct: 107 LFQLLKGLGFCHS--RNVLHRDLKPQNLLINRNGELKLADFGLAR--AFGIPVRCYSAEV 162
Query: 284 GTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGRKSL 322
T Y P+ + L S D++S G + E+ + L
Sbjct: 163 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Query: 170 LGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAK 229
+ L HP VKL + +D+ ++ + +N K + + F A+
Sbjct: 86 MSRLDHPFFVKLY-FTFQDDEKL----YFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAE 140
Query: 230 ---GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTY 286
L +LH K +I+RD K NILL+ D + +++DFG AK K + +GT
Sbjct: 141 IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 198
Query: 287 GYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
Y +PE + + SD+++ G ++ +++ G
Sbjct: 199 QYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLP---WSIRM 221
E+ L +P++V G+ +D+ ++ E R S+ + + P + +R
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ 150
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLA-KDGPEGDKSHVST 280
I +G+ +LH VI+RD K N+ L+ D + K+ DFGLA K +G++
Sbjct: 151 TI-----QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKX-- 201
Query: 281 RIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKS 325
+ GT Y APE + + D++S G +L +L G+ + S
Sbjct: 202 -LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + L+ E M + NL + + L
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQMELDHER 127
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ S +
Sbjct: 128 MSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMM 182
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT------GRKSLDKSRPAREQ 331
T + T Y APE I+ D++S G ++ E++ GR +D+ EQ
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKD--GPEGDKSHVSTRIMGTY 286
+GL ++H A+ VI+RD K SN+L++ + K+ DFG+A+ + + T + T
Sbjct: 169 RGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 226
Query: 287 GYAAPEYIMTGH-LTPRSDVYSFGVVLLEILTGRK 320
Y APE +++ H T D++S G + E+L R+
Sbjct: 227 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLP---WSIRM 221
E+ L +P++V G+ +D+ ++ E R S+ + + P + +R
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ 150
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLA-KDGPEGDKSHVST 280
I +G+ +LH VI+RD K N+ L+ D + K+ DFGLA K +G++
Sbjct: 151 TI-----QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KK 200
Query: 281 RIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKS 325
+ GT Y APE + + D++S G +L +L G+ + S
Sbjct: 201 DLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + L+ E M + NL + + L
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHER 127
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ S +
Sbjct: 128 MSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMM 182
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT------GRKSLDKSRPAREQ 331
T + T Y APE I+ D++S G ++ E++ GR +D+ EQ
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLP---WSIRM 221
E+ L +P++V G+ +D+ ++ E R S+ + + P + +R
Sbjct: 75 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ 134
Query: 222 KIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLA-KDGPEGDKSHVST 280
I +G+ +LH VI+RD K N+ L+ D + K+ DFGLA K +G++
Sbjct: 135 TI-----QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KK 184
Query: 281 RIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKS 325
+ GT Y APE + + D++S G +L +L G+ + S
Sbjct: 185 DLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 10/152 (6%)
Query: 170 LGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAK 229
+ L HP VKL + +D+ ++ + +N K + + F A+
Sbjct: 63 MSRLDHPFFVKLY-FTFQDDEKL----YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 117
Query: 230 ---GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTY 286
L +LH K +I+RD K NILL+ D + +++DFG AK K + +GT
Sbjct: 118 IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 175
Query: 287 GYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
Y +PE + SD+++ G ++ +++ G
Sbjct: 176 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYA 289
L +LH K +I+RD K NILL+ D + +++DFG AK K + +GT Y
Sbjct: 122 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 179
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+PE + SD+++ G ++ +++ G
Sbjct: 180 SPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 228 AKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT-- 285
KG+ +L + ++RD NIL++++ + K++DFGLAK P DK R G
Sbjct: 121 CKGMEYL--GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDXXVVREPGQSP 177
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
+ APE + + +SDV+SFGVVL E+ T
Sbjct: 178 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 228 AKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYG 287
A L +LH ++YRD K NILLD+ + L+DFGL K+ E + + ++ GT
Sbjct: 149 ASALGYLHSLN--IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST--TSTFCGTPE 204
Query: 288 YAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
Y APE + D + G VL E+L G
Sbjct: 205 YLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYA 289
L +LH K +I+RD K NILL+ D + +++DFG AK K + +GT Y
Sbjct: 120 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 177
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+PE + SD+++ G ++ +++ G
Sbjct: 178 SPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 85/176 (48%), Gaps = 10/176 (5%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRV-LIYEFMARGSVE 204
VA+K+ D + E+ L +L H ++ +L + E +++ ++ E+ G +
Sbjct: 38 VAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLY-HVLETANKIFMVLEYCPGGELF 96
Query: 205 NNLFSKVLLPLPWSIRMKIAF-GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSD 263
+ + S+ L ++ F +A++H + +RD K N+L D + KL D
Sbjct: 97 DYIISQDRLS---EEETRVVFRQIVSAVAYVHS--QGYAHRDLKPENLLFDEYHKLKLID 151
Query: 264 FGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIM-TGHLTPRSDVYSFGVVLLEILTG 318
FGL P+G+K + G+ YAAPE I +L +DV+S G++L ++ G
Sbjct: 152 FGLCAK-PKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYA 289
L +LH K +I+RD K NILL+ D + +++DFG AK K + +GT Y
Sbjct: 119 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 176
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+PE + SD+++ G ++ +++ G
Sbjct: 177 SPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIA 224
E+ L LSHPN++KL L+ E + G LF +++ +S R A
Sbjct: 97 TEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGG----ELFDRIVEKGYYSERD--A 150
Query: 225 FGAAK----GLAFLHEAEKPVIYRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDKSH 277
A K +A+LHE +++RD K N+L T D K++DFGL+K +
Sbjct: 151 ADAVKQILEAVAYLHE--NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQV 205
Query: 278 VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ + GT GY APE + P D++S G++ +L G
Sbjct: 206 LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 91/186 (48%), Gaps = 14/186 (7%)
Query: 138 REGLQPVPVAVKV-HDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYE 196
R+ + V A+K+ S + + L EV L L HPN++KL + + + L+ E
Sbjct: 57 RDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116
Query: 197 FMARGSVENNLFSKVLL-PLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT 255
G + + + ++ + ++ +K G+ +LH + +++RD K N+LL++
Sbjct: 117 CYKGGELFDEIIHRMKFNEVDAAVIIKQVLS---GVTYLH--KHNIVHRDLKPENLLLES 171
Query: 256 ---DYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
D K+ DFGL+ ++ + R +GT Y APE ++ + DV+S GV+L
Sbjct: 172 KEKDALIKIVDFGLS--AVFENQKKMKER-LGTAYYIAPE-VLRKKYDEKCDVWSIGVIL 227
Query: 313 LEILTG 318
+L G
Sbjct: 228 FILLAG 233
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYA 289
L +LH K +I+RD K NILL+ D + +++DFG AK K + +GT Y
Sbjct: 126 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 183
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+PE + SD+++ G ++ +++ G
Sbjct: 184 SPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + L+ E M + NL + + L
Sbjct: 72 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHER 126
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ S +
Sbjct: 127 MSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 181
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT------GRKSLDKSRPAREQ 331
T + T Y APE I+ D++S G ++ E++ GR +D+ EQ
Sbjct: 182 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 239
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + L+ E M + NL + + L
Sbjct: 74 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHER 128
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ S +
Sbjct: 129 MSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 183
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT------GRKSLDKSRPAREQ 331
T + T Y APE I+ D++S G ++ E++ GR +D+ EQ
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 241
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 15/181 (8%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMK- 222
L E+ L H H N++ + D ++ + ++ +L + + ++
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY 116
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAK---------DGPEG 273
+ + + LH + VI+RD K SN+L++++ + K+ DFGLA+ P G
Sbjct: 117 FIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 274 DKSHVSTRIMGTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGRKSLDKSRPAREQN 332
+S + T + T Y APE ++T R+ DV+S G +L E+ R+ + R R Q
Sbjct: 175 QQSGM-TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQL 232
Query: 333 L 333
L
Sbjct: 233 L 233
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 16/159 (10%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ L ++H N++ L+ E + L+ E M + NL + + L
Sbjct: 73 ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIHMELDHER 127
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ + +
Sbjct: 128 MSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAC---TNFMM 182
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
T + T Y APE I+ D++S G ++ E++ G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + L+ E M + NL + + L
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHER 127
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ S +
Sbjct: 128 MSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 182
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT------GRKSLDKSRPAREQ 331
T + T Y APE I+ D++S G ++ E++ GR +D+ EQ
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + L+ E M + NL + + L
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHER 127
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ S +
Sbjct: 128 MSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 182
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT------GRKSLDKSRPAREQ 331
T + T Y APE I+ D++S G ++ E++ GR +D+ EQ
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + L+ E M + NL + + L
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHER 165
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ S +
Sbjct: 166 MSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 220
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT------GRKSLDKSRPAREQ 331
T + T Y APE I+ D++S G ++ E++ GR +D+ EQ
Sbjct: 221 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 278
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYA 289
L +LH K +I+RD K NILL+ D + +++DFG AK K + +GT Y
Sbjct: 142 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+PE + SD+++ G ++ +++ G
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYA 289
L +LH K +I+RD K NILL+ D + +++DFG AK K + +GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+PE + SD+++ G ++ +++ G
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYA 289
L +LH K +I+RD K NILL+ D + +++DFG AK K + +GT Y
Sbjct: 141 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 198
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+PE + SD+++ G ++ +++ G
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYA 289
L +LH K +I+RD K NILL+ D + +++DFG AK K + +GT Y
Sbjct: 142 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+PE + SD+++ G ++ +++ G
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + L+ E M + NL + + L
Sbjct: 67 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHER 121
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ S +
Sbjct: 122 MSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 176
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT------GRKSLDKSRPAREQ 331
T + T Y APE I+ D++S G ++ E++ GR +D+ EQ
Sbjct: 177 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 234
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYA 289
L +LH K +I+RD K NILL+ D + +++DFG AK K + +GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+PE + SD+++ G ++ +++ G
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + L+ E M + NL + + L
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHER 165
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ S +
Sbjct: 166 MSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 220
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT------GRKSLDKSRPAREQ 331
T + T Y APE I+ D++S G ++ E++ GR +D+ EQ
Sbjct: 221 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 278
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + L+ E M + NL + + L
Sbjct: 74 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHER 128
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ S +
Sbjct: 129 MSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 183
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT------GRKSLDKSRPAREQ 331
T + T Y APE I+ D++S G ++ E++ GR +D+ EQ
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 241
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + L+ E M + NL + + L
Sbjct: 67 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHER 121
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ S +
Sbjct: 122 MSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 176
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT------GRKSLDKSRPAREQ 331
T + T Y APE I+ D++S G ++ E++ GR +D+ EQ
Sbjct: 177 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 234
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYA 289
L +LH K +I+RD K NILL+ D + +++DFG AK K + +GT Y
Sbjct: 142 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+PE + SD+++ G ++ +++ G
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYA 289
L +LH K +I+RD K NILL+ D + +++DFG AK K + +GT Y
Sbjct: 145 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 202
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+PE + SD+++ G ++ +++ G
Sbjct: 203 SPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYA 289
L +LH K +I+RD K NILL+ D + +++DFG AK K + +GT Y
Sbjct: 145 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 202
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+PE + SD+++ G ++ +++ G
Sbjct: 203 SPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 12/109 (11%)
Query: 218 SIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGL--AKDGPEGDK 275
S+ + I A+ + FLH K +++RD K SNI D K+ DFGL A D E ++
Sbjct: 118 SVCLHIFLQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 175
Query: 276 SHVS--------TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEIL 316
+ ++ T +GT Y +PE I + + D++S G++L E+L
Sbjct: 176 TVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYA 289
L +LH K +I+RD K NILL+ D + +++DFG AK K + +GT Y
Sbjct: 141 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 198
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+PE + SD+++ G ++ +++ G
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 214 PLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKD---G 270
P+ + +F A+G+ FL + + I+RD NILL + K+ DFGLA+D
Sbjct: 195 PITMEDLISYSFQVARGMEFL--SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKN 252
Query: 271 PEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT 317
P+ + TR+ + APE I + +SDV+S+GV+L EI +
Sbjct: 253 PDYVRKG-DTRL--PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 15/181 (8%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMK- 222
L E+ L H H N++ + D ++ + ++ +L + + ++
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY 116
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAK---------DGPEG 273
+ + + LH + VI+RD K SN+L++++ + K+ DFGLA+ P G
Sbjct: 117 FIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 274 DKSHVSTRIMGTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGRKSLDKSRPAREQN 332
+S + T + T Y APE ++T R+ DV+S G +L E+ R+ + R R Q
Sbjct: 175 QQSGM-TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQL 232
Query: 333 L 333
L
Sbjct: 233 L 233
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + L+ E M + NL + + L
Sbjct: 66 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHER 120
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ S +
Sbjct: 121 MSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 175
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT------GRKSLDKSRPAREQ 331
T + T Y APE I+ D++S G ++ E++ GR +D+ EQ
Sbjct: 176 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYA 289
L +LH K +I+RD K NILL+ D + +++DFG AK K + +GT Y
Sbjct: 142 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYV 199
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+PE + SD+++ G ++ +++ G
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYA 289
L +LH K +I+RD K NILL+ D + +++DFG AK K + +GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+PE + SD+++ G ++ +++ G
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYA 289
L +LH K +I+RD K NILL+ D + +++DFG AK K + +GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+PE + SD+++ G ++ +++ G
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLA-KDGPEGDKSHVSTRIMGTYGY 288
G +LH VI+RD K N+ L+ D K+ DFGLA K +G++ V + GT Y
Sbjct: 153 GCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNY 207
Query: 289 AAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKS 325
APE + + DV+S G ++ +L G+ + S
Sbjct: 208 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYA 289
L +LH K +I+RD K NILL+ D + +++DFG AK K + +GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+PE + SD+++ G ++ +++ G
Sbjct: 202 SPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLA-KDGPEGDKSHVSTRIMGTYGY 288
G +LH VI+RD K N+ L+ D K+ DFGLA K +G++ V + GT Y
Sbjct: 151 GCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNY 205
Query: 289 AAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKS 325
APE + + DV+S G ++ +L G+ + S
Sbjct: 206 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYA 289
L +LH K +I+RD K NILL+ D + +++DFG AK K + +GT Y
Sbjct: 147 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 204
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+PE + SD+++ G ++ +++ G
Sbjct: 205 SPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 16/159 (10%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ L ++H N++ L+ E + L+ E M + NL + + L
Sbjct: 71 ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIHMELDHER 125
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ + +
Sbjct: 126 MSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART---ASTNFMM 180
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
T + T Y APE I+ D++S G ++ E++ G
Sbjct: 181 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 17/102 (16%)
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPE-------------GDK 275
+ L+++H + +I+RD K NI +D N K+ DFGLAK+ G
Sbjct: 127 EALSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 276 SHVSTRIMGTYGYAAPEYI-MTGHLTPRSDVYSFGVVLLEIL 316
++++ I GT Y A E + TGH + D+YS G++ E++
Sbjct: 185 DNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 173 LSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGL- 231
L HPN+V+L E+ H LI++ + G + ++ ++ + + + L
Sbjct: 78 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAR-----EYYSEADASHCIQQILE 132
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNA---KLSDFGLAKDGPEGDKSHVSTRIMGTYGY 288
A LH + V++RD K N+LL + KL+DFGLA + EG++ GT GY
Sbjct: 133 AVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIE-VEGEQ-QAWFGFAGTPGY 190
Query: 289 AAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+PE + D+++ GV+L +L G
Sbjct: 191 LSPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 17/102 (16%)
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPE-------------GDK 275
+ L+++H + +I+RD K NI +D N K+ DFGLAK+ G
Sbjct: 127 EALSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 276 SHVSTRIMGTYGYAAPEYI-MTGHLTPRSDVYSFGVVLLEIL 316
++++ I GT Y A E + TGH + D+YS G++ E++
Sbjct: 185 DNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLA-KDGPEGDKSHVSTRIMGTYGY 288
G +LH VI+RD K N+ L+ D K+ DFGLA K +G++ V + GT Y
Sbjct: 127 GCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNY 181
Query: 289 AAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKS 325
APE + + DV+S G ++ +L G+ + S
Sbjct: 182 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 16/159 (10%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + ++ E M + NL + + L
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-----DANLSQVIQMELDHER 127
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ S +
Sbjct: 128 MSYLLYQMLVGIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMM 182
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
T + T Y APE I+ D++S G ++ E++ G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 16/159 (10%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + ++ E M + NL + + L
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMELDHER 127
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ S +
Sbjct: 128 MSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 182
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
T + T Y APE I+ D++S G ++ E++ G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 85/204 (41%), Gaps = 35/204 (17%)
Query: 128 VYKGFISEDLREGLQPVPVA-VKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLI---- 182
VYKG +E V VA ++ D + + + E L L HPN+V+
Sbjct: 42 VYKGLDTE------TTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDSWE 95
Query: 183 ----GYCCEDEHRVLIYEFMARGSVENNL----FSKVLLPLPWSIRMKIAFGAAKGLAFL 234
G C VL+ E G+++ L K+ + W ++ KGL FL
Sbjct: 96 STVKGKKC----IVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFL 145
Query: 235 HEAEKPVIYRDFKTSNILLDT-DYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEY 293
H P+I+RD K NI + + K+ D GLA ++ + ++GT + APE
Sbjct: 146 HTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT----LKRASFAKAVIGTPEFXAPEX 201
Query: 294 IMTGHLTPRSDVYSFGVVLLEILT 317
+ DVY+FG LE T
Sbjct: 202 YEEKY-DESVDVYAFGXCXLEXAT 224
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 16/159 (10%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + ++ E M + NL + + L
Sbjct: 74 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMELDHER 128
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ S +
Sbjct: 129 MSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 183
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
T + T Y APE I+ D++S G ++ E++ G
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 85/207 (41%), Gaps = 23/207 (11%)
Query: 127 CVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCC 186
CV KG E R Q VAVK+ + RE E+ L H N++ I
Sbjct: 15 CVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 72
Query: 187 EDEHRV----LIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLH------E 236
H LI + GS+ + L L L ++I A GLA LH +
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 237 AEKPVIYRDFKTSNILLDTDYNAKLSDFGLA-KDGPEGDKSHVSTR-IMGTYGYAAPEYI 294
+ + +RD K+ NIL+ + ++D GLA ++ V +GT Y APE +
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 295 MTGHLT------PRSDVYSFGVVLLEI 315
R D+++FG+VL E+
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 16/159 (10%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + ++ E M + NL + + L
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-----DANLSQVIQMELDHER 127
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ S +
Sbjct: 128 MSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMM 182
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
T + T Y APE I+ D++S G ++ E++ G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 85/207 (41%), Gaps = 23/207 (11%)
Query: 127 CVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCC 186
CV KG E R Q VAVK+ + RE E+ L H N++ I
Sbjct: 15 CVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 72
Query: 187 EDEHRV----LIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLH------E 236
H LI + GS+ + L L L ++I A GLA LH +
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 237 AEKPVIYRDFKTSNILLDTDYNAKLSDFGLA-KDGPEGDKSHVSTR-IMGTYGYAAPEYI 294
+ + +RD K+ NIL+ + ++D GLA ++ V +GT Y APE +
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 295 MTGHLT------PRSDVYSFGVVLLEI 315
R D+++FG+VL E+
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 16/159 (10%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + ++ E M + NL + + L
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMELDHER 127
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ S +
Sbjct: 128 MSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 182
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
T + T Y APE I+ D++S G ++ E++ G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 16/159 (10%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + ++ E M + NL + + L
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMELDHER 127
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ G ++
Sbjct: 128 MSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMT 183
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
++ Y Y APE I+ D++S G ++ E++ G
Sbjct: 184 PEVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 7/160 (4%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E+ L L H N+V+L D+ L++EF + F L I
Sbjct: 49 LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDL--KKYFDSCNGDLDPEIVKSF 106
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
F KGL F H + V++RD K N+L++ + KL++FGLA+ G + +
Sbjct: 107 LFQLLKGLGFCHS--RNVLHRDLKPQNLLINRNGELKLANFGLAR--AFGIPVRCYSAEV 162
Query: 284 GTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGRKSL 322
T Y P+ + L S D++S G + E+ + L
Sbjct: 163 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 16/159 (10%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + ++ E M + NL + + L
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-----DANLSQVIQMELDHER 127
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ S +
Sbjct: 128 MSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMM 182
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
T + T Y APE I+ D++S G ++ E++ G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 16/159 (10%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + ++ E M + NL + + L
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-----DANLSQVIQMELDHER 127
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ S +
Sbjct: 128 MSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 182
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
T + T Y APE I+ D++S G ++ E++ G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 96/221 (43%), Gaps = 50/221 (22%)
Query: 127 CVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAE--VIFLGHLSHPNLVKLIGY 184
VYKG + E PVAVKV S+ + ++ E + + + H N+ + I
Sbjct: 28 AVYKGSLDER--------PVAVKVF----SFANRQNFINEKNIYRVPLMEHDNIARFI-- 73
Query: 185 CCEDEH--------RVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLH- 235
DE +L+ E+ GS+ L L W ++A +GLA+LH
Sbjct: 74 -VGDERVTADGRMEYLLVMEYYPNGSLXKYL---SLHTSDWVSSCRLAHSVTRGLAYLHT 129
Query: 236 -----EAEKPVI-YRDFKTSNILLDTDYNAKLSDFGLA------KDGPEGDKSHVSTRIM 283
+ KP I +RD + N+L+ D +SDFGL+ + G++ + + +
Sbjct: 130 ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV 189
Query: 284 GTYGYAAPEYIMTGHLTPRS--------DVYSFGVVLLEIL 316
GT Y APE ++ G + R D+Y+ G++ EI
Sbjct: 190 GTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 68/158 (43%), Gaps = 11/158 (6%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E+ L L HPNLV L+ L++E+ + + +P + I
Sbjct: 50 LREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHE--LDRYQRGVPEHLVKSI 107
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAK--DGPEGDKSHVSTR 281
+ + + F H+ I+RD K NIL+ KL DFG A+ GP S
Sbjct: 108 TWQTLQAVNFCHKHN--CIHRDVKPENILITKHSVIKLCDFGFARLLTGP----SDYYDD 161
Query: 282 IMGTYGYAAPEYIM-TGHLTPRSDVYSFGVVLLEILTG 318
+ T Y +PE ++ P DV++ G V E+L+G
Sbjct: 162 EVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 85/207 (41%), Gaps = 23/207 (11%)
Query: 127 CVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCC 186
CV KG E R Q VAVK+ + RE E+ L H N++ I
Sbjct: 44 CVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 101
Query: 187 EDEHRV----LIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLH------E 236
H LI + GS+ + L L L ++I A GLA LH +
Sbjct: 102 TSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 237 AEKPVIYRDFKTSNILLDTDYNAKLSDFGLA-KDGPEGDKSHVSTR-IMGTYGYAAPEYI 294
+ + +RD K+ NIL+ + ++D GLA ++ V +GT Y APE +
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 218
Query: 295 MTGHLT------PRSDVYSFGVVLLEI 315
R D+++FG+VL E+
Sbjct: 219 DETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVL---LPLPWSIRMK 222
E+ + L HP LV L +D V+IYEFM+ G LF KV + ++
Sbjct: 98 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGE----LFEKVADEHNKMSEDEAVE 153
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNA--KLSDFGLAKDGPEGDKSHVST 280
KGL +HE ++ D K NI+ T + KL DFGL V+T
Sbjct: 154 YMRQVCKGLCHMHENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT 211
Query: 281 RIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
GT +AAPE + +D++S GV+ +L+G
Sbjct: 212 ---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 65/153 (42%), Gaps = 8/153 (5%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
E+ HL HPN+++L Y + LI E+ RG + L + I
Sbjct: 73 EIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRT--ATIME 130
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A L + H K VI+RD K N+LL K++DFG + P + + GT
Sbjct: 131 ELADALMYCH--GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRK----TMCGT 184
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
Y PE I + D++ GV+ E+L G
Sbjct: 185 LDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 15/181 (8%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMK- 222
L E+ L H H N++ + D ++ + ++ +L + + ++
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY 116
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAK---------DGPEG 273
+ + + LH + VI+RD K SN+L++++ + K+ DFGLA+ P G
Sbjct: 117 FIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 274 DKSHVSTRIMGTYGYAAPEYIMTGHLTPRS-DVYSFGVVLLEILTGRKSLDKSRPAREQN 332
+S + + T Y APE ++T R+ DV+S G +L E+ R+ + R R Q
Sbjct: 175 QQSGM-VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQL 232
Query: 333 L 333
L
Sbjct: 233 L 233
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 89/195 (45%), Gaps = 22/195 (11%)
Query: 133 ISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRV 192
+ E+ GL+ V +K + D S + AE+ L L HPN++K+ ED H +
Sbjct: 40 LVEERSSGLERV---IKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFE-VFEDYHNM 95
Query: 193 LIYEFMARGS------VENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDF 246
I G V K L + MK A LA+ H + V+++D
Sbjct: 96 YIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNA---LAYFH--SQHVVHKDL 150
Query: 247 KTSNILL-DTDYNA--KLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRS 303
K NIL DT ++ K+ DFGLA+ + ST GT Y APE + +T +
Sbjct: 151 KPENILFQDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYMAPE-VFKRDVTFKC 206
Query: 304 DVYSFGVVLLEILTG 318
D++S GVV+ +LTG
Sbjct: 207 DIWSAGVVMYFLLTG 221
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVL---LPLPWSIRMK 222
E+ + L HP LV L +D V+IYEFM+ G LF KV + ++
Sbjct: 204 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGE----LFEKVADEHNKMSEDEAVE 259
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNA--KLSDFGLAKDGPEGDKSHVST 280
KGL +HE ++ D K NI+ T + KL DFGL V+T
Sbjct: 260 YMRQVCKGLCHMHENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT 317
Query: 281 RIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
GT +AAPE + +D++S GV+ +L+G
Sbjct: 318 ---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
Query: 196 EFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT 255
EF +G++E + + L + +++ KG+ ++H K +I RD K SNI L
Sbjct: 100 EFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS--KKLINRDLKPSNIFLVD 157
Query: 256 DYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEI 315
K+ DFGL K R GT Y +PE I + D+Y+ G++L E+
Sbjct: 158 TKQVKIGDFGLVTSLKNDGK---RXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214
Query: 316 L 316
L
Sbjct: 215 L 215
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 16/159 (10%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + ++ E M + NL + + L
Sbjct: 75 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMELDHER 129
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ S +
Sbjct: 130 MSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 184
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ T Y APE I+ D++S G ++ E++ G
Sbjct: 185 VPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + ++ E M + NL + + L
Sbjct: 67 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMELDHER 121
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ S +
Sbjct: 122 MSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 176
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT------GRKSLDKSRPAREQ 331
T + T Y APE I+ D++S G ++ E++ GR +D+ EQ
Sbjct: 177 TPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 234
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLA-KDGPEGDKSHVSTRIMGTYGY 288
G +LH VI+RD K N+ L+ D K+ DFGLA K +G++ + GT Y
Sbjct: 129 GCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNY 183
Query: 289 AAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKS 325
APE + + DV+S G ++ +L G+ + S
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 18/157 (11%)
Query: 170 LGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPW----SIRMKIAF 225
+ + P +V+L +D + ++ E+M G + N L S +P W + + +A
Sbjct: 123 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLAL 181
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A + F+H RD K N+LLD + KL+DFG + T + GT
Sbjct: 182 DAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GT 232
Query: 286 YGYAAPEYIMT----GHLTPRSDVYSFGVVLLEILTG 318
Y +PE + + G+ D +S GV L E+L G
Sbjct: 233 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYA 289
G +LH VI+RD K N+ L+ D K+ DFGLA E D T + GT Y
Sbjct: 133 GCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKT-LCGTPNYI 188
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKS 325
APE + + DV+S G ++ +L G+ + S
Sbjct: 189 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 230 GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLA-KDGPEGDKSHVSTRIMGTYGY 288
G +LH VI+RD K N+ L+ D K+ DFGLA K +G++ + GT Y
Sbjct: 129 GCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNY 183
Query: 289 AAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSLDKS 325
APE + + DV+S G ++ +L G+ + S
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + ++ E M + NL + + L
Sbjct: 78 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMELDHER 132
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ S +
Sbjct: 133 MSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 187
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT------GRKSLDKSRPAREQ 331
T + T Y APE I+ D++S G ++ E++ GR +D+ EQ
Sbjct: 188 TPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 245
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + ++ E M + NL + + L
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMELDHER 127
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ G +
Sbjct: 128 MSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMME 183
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT------GRKSLDKSRPAREQ 331
++ Y Y APE I+ D++S G ++ E++ GR +D+ EQ
Sbjct: 184 PEVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 18/157 (11%)
Query: 170 LGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPW----SIRMKIAF 225
+ + P +V+L +D + ++ E+M G + N L S +P W + + +A
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLAL 186
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A + F+H RD K N+LLD + KL+DFG + T + GT
Sbjct: 187 DAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GT 237
Query: 286 YGYAAPEYIMT----GHLTPRSDVYSFGVVLLEILTG 318
Y +PE + + G+ D +S GV L E+L G
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 9/159 (5%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVL--IYEFMARGSVENNLF--SKVLLPLPWSI 219
++EV L L HPN+V+ + + L + E+ G + + + +K L
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 220 RMKIAFGAAKGLAFLH---EAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKS 276
+++ L H + V++RD K +N+ LD N KL DFGLA+ D S
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI-LNHDTS 171
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEI 315
T +GT Y +PE + +SD++S G +L E+
Sbjct: 172 FAKT-FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 18/157 (11%)
Query: 170 LGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPW----SIRMKIAF 225
+ + P +V+L +D + ++ E+M G + N L S +P W + + +A
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLAL 186
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
A + F+H RD K N+LLD + KL+DFG + T + GT
Sbjct: 187 DAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GT 237
Query: 286 YGYAAPEYIMT----GHLTPRSDVYSFGVVLLEILTG 318
Y +PE + + G+ D +S GV L E+L G
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 173 LSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGL- 231
L HPN+V+L E+ H LI++ + G + ++ ++ + + + L
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAR-----EYYSEADASHCIQQILE 121
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNA---KLSDFGLAKDGPEGDKSHVSTRIMGTYGY 288
A LH + V++R+ K N+LL + KL+DFGLA + EG++ GT GY
Sbjct: 122 AVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIE-VEGEQQ-AWFGFAGTPGY 179
Query: 289 AAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+PE + D+++ GV+L +L G
Sbjct: 180 LSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 27/166 (16%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFM----------ARGSVENNLFSKVLL 213
+ E+ L L H N+VKL + VL++E + G +E+ LL
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL 107
Query: 214 PLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEG 273
L G+A+ H+ + V++RD K N+L++ + K++DFGLA+ G
Sbjct: 108 QL------------LNGIAYCHD--RRVLHRDLKPQNLLINREGELKIADFGLAR--AFG 151
Query: 274 DKSHVSTRIMGTYGYAAPEYIM-TGHLTPRSDVYSFGVVLLEILTG 318
T + T Y AP+ +M + + D++S G + E++ G
Sbjct: 152 IPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 27/208 (12%)
Query: 128 VYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCE 187
+ KG E R + VAVK+ RE AE+ L H N++ I +
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADNK 69
Query: 188 DE----HRVLIYEFMARGSVEN--NLFSKVLLPLPWSIRMKIAFGAAKGLAFLH------ 235
D L+ ++ GS+ + N ++ + + +K+A A GLA LH
Sbjct: 70 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIVGT 124
Query: 236 EAEKPVIYRDFKTSNILLDTDYNAKLSDFGLA--KDGPEGDKSHVSTRIMGTYGYAAPEY 293
+ + + +RD K+ NIL+ + ++D GLA D +GT Y APE
Sbjct: 125 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 184
Query: 294 ----IMTGHLTP--RSDVYSFGVVLLEI 315
I H R+D+Y+ G+V EI
Sbjct: 185 LDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 27/208 (12%)
Query: 128 VYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCE 187
+ KG E R + VAVK+ RE AE+ L H N++ I +
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADNK 68
Query: 188 DE----HRVLIYEFMARGSVEN--NLFSKVLLPLPWSIRMKIAFGAAKGLAFLH------ 235
D L+ ++ GS+ + N ++ + + +K+A A GLA LH
Sbjct: 69 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIVGT 123
Query: 236 EAEKPVIYRDFKTSNILLDTDYNAKLSDFGLA--KDGPEGDKSHVSTRIMGTYGYAAPEY 293
+ + + +RD K+ NIL+ + ++D GLA D +GT Y APE
Sbjct: 124 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 183
Query: 294 ----IMTGHLTP--RSDVYSFGVVLLEI 315
I H R+D+Y+ G+V EI
Sbjct: 184 LDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 27/166 (16%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFM----------ARGSVENNLFSKVLL 213
+ E+ L L H N+VKL + VL++E + G +E+ LL
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL 107
Query: 214 PLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEG 273
L G+A+ H+ + V++RD K N+L++ + K++DFGLA+ G
Sbjct: 108 QL------------LNGIAYCHD--RRVLHRDLKPQNLLINREGELKIADFGLAR--AFG 151
Query: 274 DKSHVSTRIMGTYGYAAPEYIM-TGHLTPRSDVYSFGVVLLEILTG 318
T + T Y AP+ +M + + D++S G + E++ G
Sbjct: 152 IPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 27/166 (16%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFM----------ARGSVENNLFSKVLL 213
+ E+ L L H N+VKL + VL++E + G +E+ LL
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL 107
Query: 214 PLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEG 273
L G+A+ H+ + V++RD K N+L++ + K++DFGLA+ G
Sbjct: 108 QL------------LNGIAYCHD--RRVLHRDLKPQNLLINREGELKIADFGLAR--AFG 151
Query: 274 DKSHVSTRIMGTYGYAAPEYIM-TGHLTPRSDVYSFGVVLLEILTG 318
T + T Y AP+ +M + + D++S G + E++ G
Sbjct: 152 IPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 166 EVIFLGHLSHPNLVKLIGYCC------EDEHRVLIYEFMARGSVENNLFSKVLLPLPWSI 219
E++ + ++H N++ L+ E + ++ E M + NL + + L
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMELDHER 127
Query: 220 RMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVS 279
+ + G+ LH A +I+RD K SNI++ +D K+ DFGLA+ G +
Sbjct: 128 MSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMME 183
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILT------GRKSLDKSRPAREQ 331
++ Y Y APE I+ D++S G ++ E++ GR +D+ EQ
Sbjct: 184 PEVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 12/106 (11%)
Query: 221 MKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGL--AKDGPEGDKSHV 278
+ I A+ + FLH K +++RD K SNI D K+ DFGL A D E +++ +
Sbjct: 167 LHIFIQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
Query: 279 S--------TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEIL 316
+ +GT Y +PE I + + + D++S G++L E+L
Sbjct: 225 TPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 243 YRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPR 302
+RD K NIL+ D A L DFG+A + + + + GT Y APE H T R
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYR 215
Query: 303 SDVYSFGVVLLEILTG 318
+D+Y+ VL E LTG
Sbjct: 216 ADIYALTCVLYECLTG 231
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 27/208 (12%)
Query: 128 VYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCE 187
+ KG E R + VAVK+ RE AE+ L H N++ I +
Sbjct: 50 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADNK 107
Query: 188 DE----HRVLIYEFMARGSVEN--NLFSKVLLPLPWSIRMKIAFGAAKGLAFLH------ 235
D L+ ++ GS+ + N ++ + + +K+A A GLA LH
Sbjct: 108 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIVGT 162
Query: 236 EAEKPVIYRDFKTSNILLDTDYNAKLSDFGLA--KDGPEGDKSHVSTRIMGTYGYAAPEY 293
+ + + +RD K+ NIL+ + ++D GLA D +GT Y APE
Sbjct: 163 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 222
Query: 294 ----IMTGHLTP--RSDVYSFGVVLLEI 315
I H R+D+Y+ G+V EI
Sbjct: 223 LDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 99/251 (39%), Gaps = 34/251 (13%)
Query: 154 DNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCE--DEHRVLIYEFMARGSVENNLFSKV 211
D S + R++ E L SHPN++ ++G C H LI + GS+ N L
Sbjct: 45 DWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGT 104
Query: 212 LLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGP 271
+ S +K A A+G AFLH E + + ++ +D D A++S +
Sbjct: 105 NFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQ 164
Query: 272 EGDKSHVSTRIMGTYGYAAPEYIMTG-HLTPR--SDVYSFGVVLLEILTGRKSLDKSRPA 328
+ + + APE + T R +D +SF V+L E++T
Sbjct: 165 SPGRXYAP-------AWVAPEALQKKPEDTNRRSADXWSFAVLLWELVT----------- 206
Query: 329 REQNLADWAXXXXXXXXXXXNIIDPRLEGDYPV--KGVH-KAAMLAYHCLNHNPKARPLM 385
RE AD + LEG P G+ + L C N +P RP
Sbjct: 207 REVPFADLSNXEIGXKVA--------LEGLRPTIPPGISPHVSKLXKICXNEDPAKRPKF 258
Query: 386 RDIVDSLEPLQ 396
IV LE Q
Sbjct: 259 DXIVPILEKXQ 269
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 131 GFISEDLREGLQP----VPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCC 186
GF DL EGL + H+ + + RE +F +HPN+++L+ YC
Sbjct: 41 GFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLF----NHPNILRLVAYCL 96
Query: 187 ED---EHRV-LIYEFMARGSVENNL--FSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKP 240
+ +H L+ F RG++ N + L + + G +GL +H K
Sbjct: 97 RERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH--AKG 154
Query: 241 VIYRDFKTSNILLDTDYNAKLSDFGLAKDG---PEGDKSHVSTRIMG----TYGYAAPE- 292
+RD K +NILL + L D G EG + ++ + T Y APE
Sbjct: 155 YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPEL 214
Query: 293 YIMTGH--LTPRSDVYSFGVVLLEILTGRKSLD 323
+ + H + R+DV+S G VL ++ G D
Sbjct: 215 FSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 13/157 (8%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSK-VLLPLPWSIRMKIA 224
E+ L + H N+V L H L+ + ++ G + + + + V S+ ++
Sbjct: 56 EIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQV 115
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNIL-LDTDYNAKL--SDFGLAKDGPEGDKSHVSTR 281
A K +LHE +++RD K N+L L + N+K+ +DFGL+K G + +
Sbjct: 116 LSAVK---YLHE--NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMST 166
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
GT GY APE + + D +S GV+ +L G
Sbjct: 167 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 27/208 (12%)
Query: 128 VYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCE 187
+ KG E R + VAVK+ RE AE+ L H N++ I +
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADNK 74
Query: 188 DE----HRVLIYEFMARGSVEN--NLFSKVLLPLPWSIRMKIAFGAAKGLAFLH------ 235
D L+ ++ GS+ + N ++ + + +K+A A GLA LH
Sbjct: 75 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIVGT 129
Query: 236 EAEKPVIYRDFKTSNILLDTDYNAKLSDFGLA--KDGPEGDKSHVSTRIMGTYGYAAPEY 293
+ + + +RD K+ NIL+ + ++D GLA D +GT Y APE
Sbjct: 130 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 189
Query: 294 ----IMTGHLTP--RSDVYSFGVVLLEI 315
I H R+D+Y+ G+V EI
Sbjct: 190 LDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 27/208 (12%)
Query: 128 VYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCE 187
+ KG E R + VAVK+ RE AE+ L H N++ I +
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADNK 71
Query: 188 DE----HRVLIYEFMARGSVEN--NLFSKVLLPLPWSIRMKIAFGAAKGLAFLH------ 235
D L+ ++ GS+ + N ++ + + +K+A A GLA LH
Sbjct: 72 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIVGT 126
Query: 236 EAEKPVIYRDFKTSNILLDTDYNAKLSDFGLA--KDGPEGDKSHVSTRIMGTYGYAAPEY 293
+ + + +RD K+ NIL+ + ++D GLA D +GT Y APE
Sbjct: 127 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 186
Query: 294 ----IMTGHLTP--RSDVYSFGVVLLEI 315
I H R+D+Y+ G+V EI
Sbjct: 187 LDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 27/208 (12%)
Query: 128 VYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCE 187
+ KG E R + VAVK+ RE AE+ L H N++ I +
Sbjct: 37 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADNK 94
Query: 188 DE----HRVLIYEFMARGSVEN--NLFSKVLLPLPWSIRMKIAFGAAKGLAFLH------ 235
D L+ ++ GS+ + N ++ + + +K+A A GLA LH
Sbjct: 95 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIVGT 149
Query: 236 EAEKPVIYRDFKTSNILLDTDYNAKLSDFGLA--KDGPEGDKSHVSTRIMGTYGYAAPEY 293
+ + + +RD K+ NIL+ + ++D GLA D +GT Y APE
Sbjct: 150 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 209
Query: 294 ----IMTGHLTP--RSDVYSFGVVLLEI 315
I H R+D+Y+ G+V EI
Sbjct: 210 LDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 17/102 (16%)
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPE-------------GDK 275
+ L+++H + +I+R+ K NI +D N K+ DFGLAK+ G
Sbjct: 127 EALSYIHS--QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 276 SHVSTRIMGTYGYAAPEYI-MTGHLTPRSDVYSFGVVLLEIL 316
++++ I GT Y A E + TGH + D YS G++ E +
Sbjct: 185 DNLTSAI-GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 9/159 (5%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVL--IYEFMARGSVENNLF--SKVLLPLPWSI 219
++EV L L HPN+V+ + + L + E+ G + + + +K L
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 220 RMKIAFGAAKGLAFLH---EAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKS 276
+++ L H + V++RD K +N+ LD N KL DFGLA+ +
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR--ILNHDT 170
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEI 315
+ +GT Y +PE + +SD++S G +L E+
Sbjct: 171 SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 25/166 (15%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMAR---------GSVENNLFSKVLLP 214
+ EV L L H N+V L ++ L++E++ + G++ N K+ L
Sbjct: 48 IREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFL- 106
Query: 215 LPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGD 274
F +GLA+ H + V++RD K N+L++ KL+DFGLA+
Sbjct: 107 ----------FQLLRGLAYCHR--QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 154
Query: 275 KSHVSTRIMGTYGYAAPEYIM-TGHLTPRSDVYSFGVVLLEILTGR 319
K++ + + T Y P+ ++ + + + D++ G + E+ TGR
Sbjct: 155 KTYDNEVV--TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 9/159 (5%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVL--IYEFMARGSVENNLF--SKVLLPLPWSI 219
++EV L L HPN+V+ + + L + E+ G + + + +K L
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 220 RMKIAFGAAKGLAFLH---EAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKS 276
+++ L H + V++RD K +N+ LD N KL DFGLA+
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR--ILNHDE 170
Query: 277 HVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEI 315
+ +GT Y +PE + +SD++S G +L E+
Sbjct: 171 DFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 68/157 (43%), Gaps = 10/157 (6%)
Query: 170 LGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNL---FSKVLLP-LPWSIRMKIAF 225
L HPN+V+L+ C I + V+ +L K P LP +
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 127
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
+GL FLH +++RD K NIL+ + KL+DFGLA+ T ++ T
Sbjct: 128 QFLRGLDFLHA--NCIVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALTPVVVT 182
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSL 322
Y APE ++ D++S G + E+ RK L
Sbjct: 183 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 218
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 73/162 (45%), Gaps = 19/162 (11%)
Query: 170 LGHLSHPNLVKLIGY--CCEDEHRVLIYEFMARGSVEN-------NLFSKVLLPLPWSIR 220
L L HPN+V+L Y + R IY + V + N + + + P P I+
Sbjct: 73 LAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIK 132
Query: 221 MKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLD-TDYNAKLSDFGLAK--DGPEGDKSH 277
+ F + + LH V +RD K N+L++ D KL DFG AK E + ++
Sbjct: 133 V-FLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAY 191
Query: 278 VSTRIMGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTG 318
+ +R Y APE I H T D++S G + E++ G
Sbjct: 192 ICSRY-----YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E+M G ++FS + +S
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGG----DMFSHLRRIGRFSEPHAR 144
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+L+D K++DFG AK V R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTW 196
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E+M G ++FS + +S
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGG----DMFSHLRRIGRFSEPHAR 144
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+L+D K++DFG AK V R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTW 196
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 10/163 (6%)
Query: 161 REWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIR 220
R E+ + L HP LV L ++E ++ + + G + +L V +++
Sbjct: 60 RNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEE-TVK 118
Query: 221 MKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVST 280
+ F +A + + +I+RD K NILLD + ++DF +A P ++ ++T
Sbjct: 119 L---FICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR--ETQITT 173
Query: 281 RIMGTYGYAAPEYIMTGHLTPRS---DVYSFGVVLLEILTGRK 320
+ GT Y APE + S D +S GV E+L GR+
Sbjct: 174 -MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIA 224
E+ L L+HP ++K+ + + E ++ E M G LF KV+ + R+K A
Sbjct: 64 TEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGG----ELFDKVV----GNKRLKEA 114
Query: 225 ------FGAAKGLAFLHEAEKPVIYRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDK 275
+ + +LHE +I+RD K N+LL + D K++DFG +K G+
Sbjct: 115 TCKLYFYQMLLAVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGET 170
Query: 276 SHVSTRIMGTYGYAAPEYIM---TGHLTPRSDVYSFGVVLLEILTG 318
S + T + GT Y APE ++ T D +S GV+L L+G
Sbjct: 171 SLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIA 224
E+ L L+HP ++K+ + + E ++ E M G LF KV+ + R+K A
Sbjct: 64 TEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGG----ELFDKVV----GNKRLKEA 114
Query: 225 ------FGAAKGLAFLHEAEKPVIYRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDK 275
+ + +LHE +I+RD K N+LL + D K++DFG +K G+
Sbjct: 115 TCKLYFYQMLLAVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGET 170
Query: 276 SHVSTRIMGTYGYAAPEYIM---TGHLTPRSDVYSFGVVLLEILTG 318
S + T + GT Y APE ++ T D +S GV+L L+G
Sbjct: 171 SLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIA 224
E+ L L+HP ++K+ + + E ++ E M G LF KV+ + R+K A
Sbjct: 63 TEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGG----ELFDKVV----GNKRLKEA 113
Query: 225 ------FGAAKGLAFLHEAEKPVIYRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDK 275
+ + +LHE +I+RD K N+LL + D K++DFG +K G+
Sbjct: 114 TCKLYFYQMLLAVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGET 169
Query: 276 SHVSTRIMGTYGYAAPEYIM---TGHLTPRSDVYSFGVVLLEILTG 318
S + T + GT Y APE ++ T D +S GV+L L+G
Sbjct: 170 SLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIA 224
E+ L L+HP ++K+ + + E ++ E M G LF KV+ + R+K A
Sbjct: 64 TEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGG----ELFDKVV----GNKRLKEA 114
Query: 225 ------FGAAKGLAFLHEAEKPVIYRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDK 275
+ + +LHE +I+RD K N+LL + D K++DFG +K G+
Sbjct: 115 TCKLYFYQMLLAVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGET 170
Query: 276 SHVSTRIMGTYGYAAPEYIM---TGHLTPRSDVYSFGVVLLEILTG 318
S + T + GT Y APE ++ T D +S GV+L L+G
Sbjct: 171 SLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 10/158 (6%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
E++ LS P +V L G E + E + GS+ K + LP +
Sbjct: 116 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ--LIKQMGCLPEDRALYYLG 173
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYN-AKLSDFG----LAKDGPEGDKSHVST 280
A +GL +LH + +++ D K N+LL +D + A L DFG L DG G
Sbjct: 174 QALEGLEYLHT--RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL-GKSLLTGD 230
Query: 281 RIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
I GT + APE +M + D++S ++L +L G
Sbjct: 231 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 12/159 (7%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
E++ L+ P +V L G E + E + GS+ + + LP R
Sbjct: 135 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLP---EDRALYYL 191
Query: 226 GAA-KGLAFLHEAEKPVIYRDFKTSNILLDTD-YNAKLSDFG----LAKDGPEGDKSHVS 279
G A +GL +LH + +++ D K N+LL +D +A L DFG L DG G
Sbjct: 192 GQALEGLEYLHS--RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDG-LGKSLLTG 248
Query: 280 TRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
I GT + APE ++ + DV+S ++L +L G
Sbjct: 249 DYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 10/158 (6%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
E++ LS P +V L G E + E + GS+ K + LP +
Sbjct: 100 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ--LIKQMGCLPEDRALYYLG 157
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYN-AKLSDFG----LAKDGPEGDKSHVST 280
A +GL +LH + +++ D K N+LL +D + A L DFG L DG G
Sbjct: 158 QALEGLEYLHT--RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL-GKSLLTGD 214
Query: 281 RIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
I GT + APE +M + D++S ++L +L G
Sbjct: 215 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 10/158 (6%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
E++ LS P +V L G E + E + GS+ K + LP +
Sbjct: 114 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ--LIKQMGCLPEDRALYYLG 171
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYN-AKLSDFG----LAKDGPEGDKSHVST 280
A +GL +LH + +++ D K N+LL +D + A L DFG L DG G
Sbjct: 172 QALEGLEYLHT--RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL-GKSLLTGD 228
Query: 281 RIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
I GT + APE +M + D++S ++L +L G
Sbjct: 229 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIA 224
E+ L L+HP ++K+ + + E ++ E M G LF KV+ + R+K A
Sbjct: 70 TEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGG----ELFDKVV----GNKRLKEA 120
Query: 225 ------FGAAKGLAFLHEAEKPVIYRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDK 275
+ + +LHE +I+RD K N+LL + D K++DFG +K G+
Sbjct: 121 TCKLYFYQMLLAVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGET 176
Query: 276 SHVSTRIMGTYGYAAPEYIM---TGHLTPRSDVYSFGVVLLEILTG 318
S + T + GT Y APE ++ T D +S GV+L L+G
Sbjct: 177 SLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 26/166 (15%)
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIA 224
E+ L L+HP ++K+ + +++ +++ E M G LF KV+ + R+K A
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGE----LFDKVV----GNKRLKEA 239
Query: 225 ------FGAAKGLAFLHEAEKPVIYRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDK 275
+ + +LHE +I+RD K N+LL + D K++DFG +K G+
Sbjct: 240 TCKLYFYQMLLAVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGET 295
Query: 276 SHVSTRIMGTYGYAAPEYIM---TGHLTPRSDVYSFGVVLLEILTG 318
S + T + GT Y APE ++ T D +S GV+L L+G
Sbjct: 296 SLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 22/155 (14%)
Query: 173 LSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLP------LPWSIRMKIAFG 226
L HPN+V+L E+ L+++ + G + ++ ++ I IA+
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 227 AAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNA---KLSDFGLAKDGPEGDKSHVSTRIM 283
+ G +++R+ K N+LL + KL+DFGLA + + + H
Sbjct: 122 HSNG----------IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFA 168
Query: 284 GTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
GT GY +PE + + D+++ GV+L +L G
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 26/166 (15%)
Query: 165 AEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIA 224
E+ L L+HP ++K+ + +++ +++ E M G LF KV+ + R+K A
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGE----LFDKVV----GNKRLKEA 253
Query: 225 ------FGAAKGLAFLHEAEKPVIYRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDK 275
+ + +LHE +I+RD K N+LL + D K++DFG +K G+
Sbjct: 254 TCKLYFYQMLLAVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGET 309
Query: 276 SHVSTRIMGTYGYAAPEYIM---TGHLTPRSDVYSFGVVLLEILTG 318
S + T + GT Y APE ++ T D +S GV+L L+G
Sbjct: 310 SLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 19/167 (11%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYC---------CEDEHRVLIYEFMARGSVENNLFSKVLLP 214
L E+ L L H N+V LI C C+ L+++F L S VL+
Sbjct: 65 LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSI-YLVFDFCEHDLA--GLLSNVLVK 121
Query: 215 LPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKD---GP 271
S ++ GL ++H + +++RD K +N+L+ D KL+DFGLA+
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 179
Query: 272 EGDKSHVSTRIMGTYGYAAPEYIMTGH-LTPRSDVYSFGVVLLEILT 317
+ R++ T Y PE ++ P D++ G ++ E+ T
Sbjct: 180 NSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 22/155 (14%)
Query: 173 LSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLP------LPWSIRMKIAFG 226
L HPN+V+L E+ L+++ + G + ++ ++ I IA+
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 120
Query: 227 AAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNA---KLSDFGLAKDGPEGDKSHVSTRIM 283
+ G +++R+ K N+LL + KL+DFGLA + + + H
Sbjct: 121 HSNG----------IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFA 167
Query: 284 GTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
GT GY +PE + + D+++ GV+L +L G
Sbjct: 168 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++A G +FS + +S
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE----MFSHLRRIGRFSEPHAR 144
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+L+D +++DFG AK V R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 197 XLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 22/155 (14%)
Query: 173 LSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLP------LPWSIRMKIAFG 226
L HPN+V+L E+ L+++ + G + ++ ++ I IA+
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 227 AAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNA---KLSDFGLAKDGPEGDKSHVSTRIM 283
+ G +++R+ K N+LL + KL+DFGLA + + + H
Sbjct: 122 HSNG----------IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFA 168
Query: 284 GTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
GT GY +PE + + D+++ GV+L +L G
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++A G +FS + +S
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE----MFSHLRRIGRFSEPHAR 144
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+L+D +++DFG AK V R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 197 XLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 73/164 (44%), Gaps = 22/164 (13%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
E++ L+ P +V L G E + E + GS+ + + LP R
Sbjct: 116 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLP---EDRALYYL 172
Query: 226 GAA-KGLAFLHEAEKPVIYRDFKTSNILLDTD-YNAKLSDFG---------LAKDGPEGD 274
G A +GL +LH + +++ D K N+LL +D +A L DFG L KD GD
Sbjct: 173 GQALEGLEYLHS--RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGD 230
Query: 275 KSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
I GT + APE ++ + DV+S ++L +L G
Sbjct: 231 Y------IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 5/149 (3%)
Query: 173 LSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLA 232
L HP++V+L+ D +++EFM + + + +S + + A
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 233 FLHEAEKPVIYRDFKTSNILLDTDYNA---KLSDFGLAKDGPEGDKSHVSTRIMGTYGYA 289
+ + +I+RD K N+LL + N+ KL DFG+A G+ V+ +GT +
Sbjct: 143 LRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQ--LGESGLVAGGRVGTPHFM 200
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTG 318
APE + DV+ GV+L +L+G
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 168 IFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIR--MKIAF 225
I L + HPN++ L + ++ ++ E M G L K+L +S R + F
Sbjct: 68 ILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGG----ELLDKILRQKFFSEREASAVLF 123
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNIL-LDTDYN---AKLSDFGLAKDGPEGDKSHVSTR 281
K + +LH + V++RD K SNIL +D N ++ DFG AK + + T
Sbjct: 124 TITKTVEYLHA--QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ-LRAENGLLMTP 180
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
T + APE + D++S GV+L +LTG
Sbjct: 181 CY-TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++A G +FS + +S
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE----MFSHLRRIGRFSEPHAR 144
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+L+D +++DFG AK V R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 19/167 (11%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYC---------CEDEHRVLIYEFMARGSVENNLFSKVLLP 214
L E+ L L H N+V LI C C+ L+++F L S VL+
Sbjct: 65 LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSI-YLVFDFCEHDLA--GLLSNVLVK 121
Query: 215 LPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGD 274
S ++ GL ++H + +++RD K +N+L+ D KL+DFGLA+
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 179
Query: 275 KSH---VSTRIMGTYGYAAPEYIMTGH-LTPRSDVYSFGVVLLEILT 317
S R++ T Y PE ++ P D++ G ++ E+ T
Sbjct: 180 NSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++A G +FS + +S
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE----MFSHLRRIGRFSEPHAR 165
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
+ A L F + +IYRD K N+L+D +++DFG AK + +
Sbjct: 166 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGATWTLC 220
Query: 284 GTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
GT Y APE I++ D ++ GV++ E+ G
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 174 SHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAF 233
HPN+VKL + H L+ E + G LF ++ +S A
Sbjct: 64 GHPNIVKLHEVFHDQLHTFLVMELLNGGE----LFERIKKKKHFSETEASYIMRKLVSAV 119
Query: 234 LHEAEKPVIYRDFKTSNILLDTDYN----AKLSDFGLAKDGPEGDKSHVSTRIMGTYGYA 289
H + V++RD K N+L TD N K+ DFG A+ P D + T T YA
Sbjct: 120 SHMHDVGVVHRDLKPENLLF-TDENDNLEIKIIDFGFARLKPP-DNQPLKTPCF-TLHYA 176
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
APE + D++S GV+L +L+G+
Sbjct: 177 APELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++A G +FS + +S
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE----MFSHLRRIGRFSEPHAR 144
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+L+D +++DFG AK V R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 19/167 (11%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYC---------CEDEHRVLIYEFMARGSVENNLFSKVLLP 214
L E+ L L H N+V LI C C+ L+++F L S VL+
Sbjct: 64 LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSI-YLVFDFCEHDLA--GLLSNVLVK 120
Query: 215 LPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGD 274
S ++ GL ++H + +++RD K +N+L+ D KL+DFGLA+
Sbjct: 121 FTLSEIKRVMQMLLNGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 178
Query: 275 KSH---VSTRIMGTYGYAAPEYIMTGH-LTPRSDVYSFGVVLLEILT 317
S R++ T Y PE ++ P D++ G ++ E+ T
Sbjct: 179 NSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++A G +FS + +S
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE----MFSHLRRIGRFSEPHAR 144
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+L+D +++DFG AK V R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++A G +FS + +S
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE----MFSHLRRIGRFSEPHAR 144
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+L+D +++DFG AK V R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++A G +FS + +S
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE----MFSHLRRIGRFSEPHAR 144
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+L+D +++DFG AK V R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++A G +FS + +S
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE----MFSHLRRIGRFSEPHAR 145
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+L+D +++DFG AK V R
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 197
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 10/157 (6%)
Query: 170 LGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNL---FSKVLLP-LPWSIRMKIAF 225
L HPN+V+L+ C I + V+ +L K P LP +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
+GL FLH +++RD K NIL+ + KL+DFGLA+ ++ T
Sbjct: 120 QFLRGLDFLHA--NCIVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALAPVVVT 174
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSL 322
Y APE ++ D++S G + E+ RK L
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 19/167 (11%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYC---------CEDEHRVLIYEFMARGSVENNLFSKVLLP 214
L E+ L L H N+V LI C C+ L+++F L S VL+
Sbjct: 65 LREIKILQLLKHENVVNLIEICRTKASPYNRCK-ASIYLVFDFCEHDLA--GLLSNVLVK 121
Query: 215 LPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGD 274
S ++ GL ++H + +++RD K +N+L+ D KL+DFGLA+
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 179
Query: 275 KSH---VSTRIMGTYGYAAPEYIMTGH-LTPRSDVYSFGVVLLEILT 317
S R++ T Y PE ++ P D++ G ++ E+ T
Sbjct: 180 NSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSK-VLLPLPWSIRMKIA 224
E+ L + H N+V L H L+ + ++ G + + + K S ++
Sbjct: 70 EIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQV 129
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILL---DTDYNAKLSDFGLAKDGPEGDKSHVSTR 281
A + +LH +++RD K N+L D + +SDFGL+K +GD V +
Sbjct: 130 LDA---VYYLHRM--GIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMST 181
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
GT GY APE + + D +S GV+ +L G
Sbjct: 182 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++A G +FS + +S
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE----MFSHLRRIGRFSEPHAR 144
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+L+D +++DFG AK V R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 22/155 (14%)
Query: 173 LSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLP------WSIRMKIAFG 226
L HPN+V+L E+ L+++ + G + ++ ++ I IA+
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 144
Query: 227 AAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNA---KLSDFGLAKDGPEGDKSHVSTRIM 283
+ G +++R+ K N+LL + KL+DFGLA + + + H
Sbjct: 145 HSNG----------IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFA 191
Query: 284 GTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
GT GY +PE + + D+++ GV+L +L G
Sbjct: 192 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 215 LPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGD 274
+P I KIA K L LH ++ VI+RD K SN+L++ K+ DFG++ G D
Sbjct: 150 IPEDILGKIAVSIVKALEHLH-SKLSVIHRDVKPSNVLINALGQVKMCDFGIS--GYLVD 206
Query: 275 KSHVSTRIMGTYGYAAPEYI-----MTGHLTPRSDVYSFGVVLLEILTGR 319
S T G Y APE I G+ + +SD++S G+ ++E+ R
Sbjct: 207 -SVAKTIDAGCKPYMAPERINPELNQKGY-SVKSDIWSLGITMIELAILR 254
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++A G +FS + +S
Sbjct: 76 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE----MFSHLRRIGRFSEPHAR 131
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+L+D +++DFG AK V R
Sbjct: 132 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAK--------RVKGRTW 183
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 184 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 10/157 (6%)
Query: 170 LGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNL---FSKVLLP-LPWSIRMKIAF 225
L HPN+V+L+ C I + V+ +L K P LP +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
+GL FLH +++RD K NIL+ + KL+DFGLA+ ++ T
Sbjct: 120 QFLRGLDFLHA--NCIVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALDPVVVT 174
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSL 322
Y APE ++ D++S G + E+ RK L
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 13/149 (8%)
Query: 188 DEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFK 247
D+ L+ EF GSV + + + L I +GL+ LH+ + VI+RD K
Sbjct: 99 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK--VIHRDIK 156
Query: 248 TSNILLDTDYNAKLSDFGLAK--DGPEGDKSHVSTRIMGTYGYAAPEYIMT-----GHLT 300
N+LL + KL DFG++ D G ++ +GT + APE I
Sbjct: 157 GQNVLLTENAEVKLVDFGVSAQLDRTVGRRN----TFIGTPYWMAPEVIACDENPDATYD 212
Query: 301 PRSDVYSFGVVLLEILTGRKSLDKSRPAR 329
+SD++S G+ +E+ G L P R
Sbjct: 213 FKSDLWSLGITAIEMAEGAPPLCDMHPMR 241
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++A G + ++L P +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHA----- 143
Query: 224 AFGAAK---GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVST 280
F AA+ +LH + +IYRD K N+L+D +++DFG AK V
Sbjct: 144 RFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 281 R---IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
R + GT Y APE I++ D ++ GV++ E+ G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 9/123 (7%)
Query: 154 DNSYQGHREWLAEVIFLGHLS-HPNLVKL-----IGYCCEDEHR---VLIYEFMARGSVE 204
N + +R + EV F+ LS HPN+V+ IG D + +L+ E VE
Sbjct: 63 SNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVE 122
Query: 205 NNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDF 264
+ PL +KI + + + +H + P+I+RD K N+LL KL DF
Sbjct: 123 FLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDF 182
Query: 265 GLA 267
G A
Sbjct: 183 GSA 185
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++A G + ++L P +
Sbjct: 84 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHA----- 138
Query: 224 AFGAAK---GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVST 280
F AA+ +LH + +IYRD K N+L+D +++DFG AK V
Sbjct: 139 RFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 188
Query: 281 R---IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
R + GT Y APE I++ D ++ GV++ E+ G
Sbjct: 189 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 10/157 (6%)
Query: 170 LGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNL---FSKVLLP-LPWSIRMKIAF 225
L HPN+V+L+ C I + V+ +L K P LP +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGT 285
+GL FLH +++RD K NIL+ + KL+DFGLA+ ++ T
Sbjct: 120 QFLRGLDFLHA--NCIVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALFPVVVT 174
Query: 286 YGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGRKSL 322
Y APE ++ D++S G + E+ RK L
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++A G + ++L P +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHA----- 143
Query: 224 AFGAAK---GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVST 280
F AA+ +LH + +IYRD K N+L+D +++DFG AK V
Sbjct: 144 RFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 281 R---IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
R + GT Y APE I++ D ++ GV++ E+ G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++A G + ++L P +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHA----- 143
Query: 224 AFGAAK---GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVST 280
F AA+ +LH + +IYRD K N+L+D +++DFG AK V
Sbjct: 144 RFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 281 R---IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
R + GT Y APE I++ D ++ GV++ E+ G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++A G + ++L P +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHA----- 143
Query: 224 AFGAAK---GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVST 280
F AA+ +LH + +IYRD K N+L+D +++DFG AK V
Sbjct: 144 RFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 281 R---IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
R + GT Y APE I++ D ++ GV++ E+ G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 173 LSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGL- 231
L H N+V+L E+ L+++ + G + ++ ++ + + + L
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-----EYYSEADASHCIQQILE 114
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNA---KLSDFGLAKDGPEGDKSHVSTRIMGTYGY 288
A LH + V++RD K N+LL + KL+DFGLA + +GD+ GT GY
Sbjct: 115 AVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIE-VQGDQQ-AWFGFAGTPGY 172
Query: 289 AAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+PE + D+++ GV+L +L G
Sbjct: 173 LSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++A G +FS + +S
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE----MFSHLRRIGRFSEPHAR 144
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+L+D +++DFG AK V R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ ++ G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++A G +FS + +S
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE----MFSHLRRIGRFSEPHAR 144
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+++D +++DFG AK V R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 197 XLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++ G +FS + +S
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE----MFSHLRRIGRFSEPHAR 144
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+L+D K++DFG AK V R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTW 196
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++A G + ++L P +
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHA----- 164
Query: 224 AFGAAK---GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVST 280
F AA+ +LH + +IYRD K N+L+D +++DFG AK V
Sbjct: 165 RFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 214
Query: 281 R---IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
R + GT Y APE I++ D ++ GV++ E+ G
Sbjct: 215 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E+ G +FS + +S
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGE----MFSHLRRIGRFSEPHAR 144
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+++D K++DFGLAK V R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAK--------RVKGRTW 196
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 14/157 (8%)
Query: 168 IFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMK--IAF 225
I L + HPN++ L + +H L+ E M G L K+L +S R +
Sbjct: 73 ILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGG----ELLDKILRQKFFSEREASFVLH 128
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNIL-LDTDYN---AKLSDFGLAKDGPEGDKSHVSTR 281
K + +LH + V++RD K SNIL +D N ++ DFG AK + + T
Sbjct: 129 TIGKTVEYLHS--QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQ-LRAENGLLMTP 185
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
T + APE + D++S G++L +L G
Sbjct: 186 CY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 14/157 (8%)
Query: 168 IFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMK--IAF 225
I L + HPN++ L + +H L+ E M G L K+L +S R +
Sbjct: 73 ILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGG----ELLDKILRQKFFSEREASFVLH 128
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNIL-LDTDYN---AKLSDFGLAKDGPEGDKSHVSTR 281
K + +LH + V++RD K SNIL +D N ++ DFG AK + + T
Sbjct: 129 TIGKTVEYLHS--QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQ-LRAENGLLMTP 185
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
T + APE + D++S G++L +L G
Sbjct: 186 CY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 80/191 (41%), Gaps = 40/191 (20%)
Query: 175 HPNLVKLIGYCCEDEHRVL-----IYEFMARGSVENNLFSKVLLPL-----PWSIRMKIA 224
HPN+++ YC E R L + + VE+ S L L P S+ +IA
Sbjct: 68 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDT-------------DYNAKLSDFGLAKDGP 271
G+A LH + +I+RD K NIL+ T + +SDFGL K
Sbjct: 126 ----SGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
Query: 272 EGDKSHVST--RIMGTYGYAAPEYIMTGH-------LTPRSDVYSFGVVLLEILTGRKSL 322
G S + GT G+ APE + + LT D++S G V IL+ K
Sbjct: 180 SGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
Query: 323 DKSRPAREQNL 333
+ +RE N+
Sbjct: 240 FGDKYSRESNI 250
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 89/234 (38%), Gaps = 43/234 (18%)
Query: 174 SHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAF 233
HP +++L+ + E +L+ E R +LF + P F A
Sbjct: 96 GHPGVIRLLDWFETQEGFMLVLE---RPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAI 152
Query: 234 LHEAEKPVIYRDFKTSNILLDTDYN-AKLSDFG---LAKDGPEGDKSHVSTRIMGTYGYA 289
H + V++RD K NIL+D AKL DFG L D P D GT Y+
Sbjct: 153 QHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFD-------GTRVYS 205
Query: 290 APEYIMTG--HLTPRSDVYSFGVVLLEILTGRKSLDKSRPAREQNLADWAXXXXXXXXXX 347
PE+I H P + V+S G++L +++ G ++ + E L
Sbjct: 206 PPEWISRHQYHALP-ATVWSLGILLYDMVCGDIPFERDQEILEAEL-------------- 250
Query: 348 XNIIDPRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVDSLEPLQVLPDE 401
+P L CL P +RP + +I+ L+P P E
Sbjct: 251 ----------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEIL--LDPWMQTPAE 292
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 16/113 (14%)
Query: 215 LPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGL-------- 266
+P I KIA K L LH ++ VI+RD K SN+L++ K+ DFG+
Sbjct: 106 IPEDILGKIAVSIVKALEHLH-SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV 164
Query: 267 AKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
AKD G K +++ + PE G+ + +SD++S G+ ++E+ R
Sbjct: 165 AKDIDAGCKPYMAPERIN------PELNQKGY-SVKSDIWSLGITMIELAILR 210
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 15/186 (8%)
Query: 140 GLQPVPVAVKVHDGDNSYQG-HREWLA-EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEF 197
GLQ +K +S +G RE + EV L + HPN++ L +LI E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 198 MARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDY 257
+A G + + L K L + + G+ +LH + + + D K NI+L D
Sbjct: 96 VAGGELFDFLAEKESLTEEEA--TEFLKQILNGVYYLHSLQ--IAHFDLKPENIML-LDR 150
Query: 258 NA-----KLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
N K+ DFGLA G++ I GT + APE + L +D++S GV+
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPAFVAPEIVNYEPLGLEADMWSIGVIT 207
Query: 313 LEILTG 318
+L+G
Sbjct: 208 YILLSG 213
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 36/128 (28%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKD------------- 269
I + G F+HE+ +I+RD K +N LL+ D + K+ DFGLA+
Sbjct: 136 ILYNLLLGEKFIHES--GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDL 193
Query: 270 ---------GPEGDK------SHVSTRIMGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLL 313
GP SHV TR Y APE I+ + T D++S G +
Sbjct: 194 EEKEENEEPGPHNKNLKKQLTSHVVTR-----WYRAPELILLQENYTNSIDIWSTGCIFA 248
Query: 314 EILTGRKS 321
E+L KS
Sbjct: 249 ELLNMMKS 256
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVL---LPLPWSIRMK 222
E+ + L HP L+ L + VLI EF++ G LF ++ + + +
Sbjct: 98 EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGG----ELFDRIAAEDYKMSEAEVIN 153
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTD--YNAKLSDFGLAKDGPEGDKSHVST 280
A +GL +H E +++ D K NI+ +T + K+ DFGLA + V+T
Sbjct: 154 YMRQACEGLKHMH--EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT 211
Query: 281 RIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
T +AAPE + + +D+++ GV+ +L+G
Sbjct: 212 ---ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 81/185 (43%), Gaps = 13/185 (7%)
Query: 140 GLQPVPVAVKVHDGDNSYQG--HREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEF 197
GL+ +K S +G E EV L + HPN++ L VLI E
Sbjct: 37 GLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILEL 96
Query: 198 MARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNI-LLDTD 256
++ G + + L K L + G+ +LH K + + D K NI LLD +
Sbjct: 97 VSGGELFDFLAQKESLSEEEA--TSFIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKN 152
Query: 257 Y---NAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLL 313
+ KL DFGLA + +G + I GT + APE + L +D++S GV+
Sbjct: 153 IPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 314 EILTG 318
+L+G
Sbjct: 210 ILLSG 214
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 14/163 (8%)
Query: 166 EVIFLGHLSHPNLVKL-IGYCCEDEHRVLIYEFMARGSVENNLF------SKVLLPLPWS 218
E+ + L H N+V+L + E + ++Y + V ++ S+ LP
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 219 IRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNA-KLSDFGLAKDGPEGDKSH 277
+ + LA++H + +RD K N+LLD D KL DFG AK G+ +
Sbjct: 123 YVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN- 179
Query: 278 VSTRIMGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
+ I Y Y APE I T DV+S G VL E+L G+
Sbjct: 180 -VSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 31/193 (16%)
Query: 131 GFISEDLREGLQPVPVAVK--VHDGDNSYQGH----REWLAEVIFLGHLSHPNLVKLIGY 184
G+I L + PV +K VH GD Q R++LAEV+ HP++V++ +
Sbjct: 94 GWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVV------HPSIVQIFNF 147
Query: 185 C-CEDEH----RVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEK 239
D H ++ E++ S++ + K LP+ +I + A L++LH
Sbjct: 148 VEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK--LPVAEAIAYLLEILPA--LSYLHSIG- 202
Query: 240 PVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHL 299
++Y D K NI+L T+ KL D G + + + GT G+ APE + TG
Sbjct: 203 -LVYNDLKPENIML-TEEQLKLIDLGAVS------RINSFGYLYGTPGFQAPEIVRTGP- 253
Query: 300 TPRSDVYSFGVVL 312
T +D+Y+ G L
Sbjct: 254 TVATDIYTVGRTL 266
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++ G +FS + +S
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGE----MFSHLRRIGRFSEPHAR 144
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+L+D +++DFG AK V R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++ G +FS + +S
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGE----MFSHLRRIGRFSEPHAR 144
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+L+D +++DFG AK V R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++ G +FS + +S
Sbjct: 82 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE----MFSHLRRIGRFSEPHAR 137
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+L+D +++DFG AK V R
Sbjct: 138 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 189
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 190 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 11/95 (11%)
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNA-KLSDFGLAKDGPEGDK--SHVSTRIMGT 285
+ LA++H + +RD K N+LLD D KL DFG AK G+ S++ +R
Sbjct: 133 RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--- 187
Query: 286 YGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE I T DV+S G VL E+L G+
Sbjct: 188 --YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 11/95 (11%)
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNA-KLSDFGLAKDGPEGDK--SHVSTRIMGT 285
+ LA++H + +RD K N+LLD D KL DFG AK G+ S++ +R
Sbjct: 133 RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--- 187
Query: 286 YGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE I T DV+S G VL E+L G+
Sbjct: 188 --YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++ G +FS + +S
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGE----MFSHLRRIGRFSEPHAR 144
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+L+D +++DFG AK V R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++A G +FS + +S
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE----MFSHLRRIGRFSEPHAR 144
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+L+D +++DFG AK V R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y AP I++ D ++ GV++ E+ G
Sbjct: 197 XLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 233 FLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR---IMGTYGYA 289
+LH + +IYRD K N+L+D K++DFG AK V R + GT Y
Sbjct: 157 YLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYL 206
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTG 318
APE I++ D ++ GV++ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 11/95 (11%)
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNA-KLSDFGLAKDGPEGDK--SHVSTRIMGT 285
+ LA++H + +RD K N+LLD D KL DFG AK G+ S++ +R
Sbjct: 161 RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--- 215
Query: 286 YGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE I T DV+S G VL E+L G+
Sbjct: 216 --YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 11/95 (11%)
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNA-KLSDFGLAKDGPEGDK--SHVSTRIMGT 285
+ LA++H + +RD K N+LLD D KL DFG AK G+ S++ +R
Sbjct: 167 RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--- 221
Query: 286 YGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE I T DV+S G VL E+L G+
Sbjct: 222 --YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++ G +FS + +S
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE----MFSHLRRIGRFSEPHAR 145
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+L+D +++DFG AK V R
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 197
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++ G +FS + +S
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE----MFSHLRRIGRFSEPHAR 144
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+L+D +++DFG AK V R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++ G +FS + +S
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE----MFSHLRRIGRFSEPHAR 145
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
+ A L F + +IYRD K N+L+D +++DFG AK K T +
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWT-LC 200
Query: 284 GTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
GT Y APE I++ D ++ GV++ E+ G
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 11/95 (11%)
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNA-KLSDFGLAKDGPEGDK--SHVSTRIMGT 285
+ LA++H + +RD K N+LLD D KL DFG AK G+ S++ +R
Sbjct: 133 RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--- 187
Query: 286 YGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE I T DV+S G VL E+L G+
Sbjct: 188 --YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 11/95 (11%)
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNA-KLSDFGLAKDGPEGDK--SHVSTRIMGT 285
+ LA++H + +RD K N+LLD D KL DFG AK G+ S++ +R
Sbjct: 146 RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--- 200
Query: 286 YGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE I T DV+S G VL E+L G+
Sbjct: 201 --YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++ G +FS + +S
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE----MFSHLRRIGRFSEPHAR 144
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+L+D +++DFG AK V R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 55/125 (44%), Gaps = 33/125 (26%)
Query: 223 IAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKD------------- 269
I + G F+HE+ +I+RD K +N LL+ D + K+ DFGLA+
Sbjct: 134 ILYNLLLGENFIHES--GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDL 191
Query: 270 ------GPEGDK------SHVSTRIMGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEIL 316
GP SHV TR Y APE I+ + T D++S G + E+L
Sbjct: 192 EENEEPGPHNKNLKKQLTSHVVTR-----WYRAPELILLQENYTKSIDIWSTGCIFAELL 246
Query: 317 TGRKS 321
+S
Sbjct: 247 NMLQS 251
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 11/95 (11%)
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNA-KLSDFGLAKDGPEGDK--SHVSTRIMGT 285
+ LA++H + +RD K N+LLD D KL DFG AK G+ S++ +R
Sbjct: 169 RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--- 223
Query: 286 YGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE I T DV+S G VL E+L G+
Sbjct: 224 --YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++ G +FS + +S
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE----MFSHLRRIGRFSEPHAR 145
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+L+D +++DFG AK V R
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 197
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++ G +FS + +S
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE----MFSHLRRIGRFSEPHAR 144
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+L+D +++DFG AK V R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++ G +FS + +S
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE----MFSHLRRIGRFSEPHAR 145
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+L+D +++DFG AK V R
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 197
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++ G +FS + +S
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE----MFSHLRRIGRFSEPHAR 145
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+L+D +++DFG AK V R
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 197
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++ G +FS + +S
Sbjct: 75 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE----MFSHLRRIGRFSEPHAR 130
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIM 283
+ A L F + +IYRD K N+L+D +++DFG AK K T +
Sbjct: 131 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWT-LC 185
Query: 284 GTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
GT Y APE I++ D ++ GV++ E+ G
Sbjct: 186 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E+ G +FS + +S
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGE----MFSHLRRIGRFSEPHAR 144
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+++D +++DFGLAK V R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAK--------RVKGRTW 196
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 11/95 (11%)
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNA-KLSDFGLAKDGPEGDK--SHVSTRIMGT 285
+ LA++H + +RD K N+LLD D KL DFG AK G+ S++ +R
Sbjct: 171 RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--- 225
Query: 286 YGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE I T DV+S G VL E+L G+
Sbjct: 226 --YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 11/95 (11%)
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNA-KLSDFGLAKDGPEGDK--SHVSTRIMGT 285
+ LA++H + +RD K N+LLD D KL DFG AK G+ S++ +R
Sbjct: 212 RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--- 266
Query: 286 YGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE I T DV+S G VL E+L G+
Sbjct: 267 --YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E+ G +FS + +S
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGE----MFSHLRRIGRFSEPHAR 145
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+++D K++DFG AK V R
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTW 197
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 11/95 (11%)
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNA-KLSDFGLAKDGPEGDK--SHVSTRIMGT 285
+ LA++H + +RD K N+LLD D KL DFG AK G+ S++ +R
Sbjct: 138 RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--- 192
Query: 286 YGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE I T DV+S G VL E+L G+
Sbjct: 193 --YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E+ G +FS + +S
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGE----MFSHLRRIGRFSEPHAR 144
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+++D K++DFG AK V R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTW 196
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++ G +FS + +S
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE----MFSHLRRIGRFSEPHAR 165
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+L+D +++DFG AK V R
Sbjct: 166 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 217
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 218 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 17/130 (13%)
Query: 193 LIYEFMARGSVENNLFSKVLLPL--------PWSIRMKIAFGAAKGLAFLHEAEKPVIYR 244
+IYE+M S+ F + L P + I +++H EK + +R
Sbjct: 120 IIYEYMENDSILK--FDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN-EKNICHR 176
Query: 245 DFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIM--TGHLTPR 302
D K SNIL+D + KLSDFG ++ DK +R GTY + PE+ + + +
Sbjct: 177 DVKPSNILMDKNGRVKLSDFGESE--YMVDKKIKGSR--GTYEFMPPEFFSNESSYNGAK 232
Query: 303 SDVYSFGVVL 312
D++S G+ L
Sbjct: 233 VDIWSLGICL 242
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 14/157 (8%)
Query: 168 IFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIR--MKIAF 225
I L + HPN++ L + ++ ++ E G L K+L +S R + F
Sbjct: 68 ILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGG----ELLDKILRQKFFSEREASAVLF 123
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNIL-LDTDYN---AKLSDFGLAKDGPEGDKSHVSTR 281
K + +LH + V++RD K SNIL +D N ++ DFG AK + + T
Sbjct: 124 TITKTVEYLHA--QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ-LRAENGLLXTP 180
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
T + APE + D++S GV+L LTG
Sbjct: 181 CY-TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 15/186 (8%)
Query: 140 GLQPVPVAVKVHDGDNSYQG-HREWLA-EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEF 197
GLQ +K +S +G RE + EV L + HPN++ L +LI E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 198 MARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDY 257
+A G + + L K L + + G+ +LH + + + D K NI+L D
Sbjct: 96 VAGGELFDFLAEKESLTEEEA--TEFLKQILNGVYYLHSLQ--IAHFDLKPENIML-LDR 150
Query: 258 NA-----KLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
N K+ DFGLA G++ I GT + APE + L +D++S GV+
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207
Query: 313 LEILTG 318
+L+G
Sbjct: 208 YILLSG 213
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNA-KLSDFGLAKDGPEGDKSHVSTRIMGTYG 287
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + I Y
Sbjct: 134 RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRY- 188
Query: 288 YAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE I T DV+S G VL E+L G+
Sbjct: 189 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNA-KLSDFGLAKDGPEGDKSHVSTRIMGTYG 287
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + I Y
Sbjct: 133 RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRY- 187
Query: 288 YAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE I T DV+S G VL E+L G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 21/143 (14%)
Query: 187 EDEHRVLIYEFMARGSVENNLFSKVLLPLP------WSIRMKIAFGAAKGLAFLHEAEKP 240
+D + L+ ++ G + L SK LP + M IA + L ++H
Sbjct: 145 DDNNLYLVMDYYVGGDLLT-LLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH----- 198
Query: 241 VIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMT---- 296
RD K NIL+D + + +L+DFG E D + S+ +GT Y +PE +
Sbjct: 199 ---RDIKPDNILMDMNGHIRLADFGSCLKLME-DGTVQSSVAVGTPDYISPEILQAMEGG 254
Query: 297 -GHLTPRSDVYSFGVVLLEILTG 318
G P D +S GV + E+L G
Sbjct: 255 KGRYGPECDWWSLGVCMYEMLYG 277
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNA-KLSDFGLAKDGPEGDKSHVSTRIMGTYG 287
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + I Y
Sbjct: 152 RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRY- 206
Query: 288 YAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE I T DV+S G VL E+L G+
Sbjct: 207 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNA-KLSDFGLAKDGPEGDKSHVSTRIMGTYG 287
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + I Y
Sbjct: 141 RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRY- 195
Query: 288 YAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE I T DV+S G VL E+L G+
Sbjct: 196 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNA-KLSDFGLAKDGPEGDKSHVSTRIMGTYG 287
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + I Y
Sbjct: 133 RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRY- 187
Query: 288 YAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE I T DV+S G VL E+L G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 15/186 (8%)
Query: 140 GLQPVPVAVKVHDGDNSYQG-HREWLA-EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEF 197
GLQ +K +S +G RE + EV L + HPN++ L +LI E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 198 MARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDY 257
+A G + + L K L + G+ +LH + + + D K NI+L D
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLHSLQ--IAHFDLKPENIML-LDR 150
Query: 258 NA-----KLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
N K+ DFGLA G++ I GT + APE + L +D++S GV+
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207
Query: 313 LEILTG 318
+L+G
Sbjct: 208 YILLSG 213
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNA-KLSDFGLAKDGPEGDKSHVSTRIMGTYG 287
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + I Y
Sbjct: 145 RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRY- 199
Query: 288 YAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE I T DV+S G VL E+L G+
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 77/187 (41%), Gaps = 36/187 (19%)
Query: 175 HPNLVKLIGYCCEDEHRVL-----IYEFMARGSVENNLFSKVLLPL-----PWSIRMKIA 224
HPN+++ YC E R L + + VE+ S L L P S+ +IA
Sbjct: 86 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDT-------------DYNAKLSDFGLAKDGP 271
G+A LH + +I+RD K NIL+ T + +SDFGL K
Sbjct: 144 ----SGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 197
Query: 272 EGDKSHVST--RIMGTYGYAAPEYI---MTGHLTPRSDVYSFGVVLLEILTGRKSLDKSR 326
G GT G+ APE + LT D++S G V IL+ K +
Sbjct: 198 SGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 257
Query: 327 PAREQNL 333
+RE N+
Sbjct: 258 YSRESNI 264
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 233 FLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR---IMGTYGYA 289
+LH + +IYRD K N+++D K++DFG AK V R + GT Y
Sbjct: 156 YLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYL 205
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTG 318
APE I++ D ++ GV++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNA-KLSDFGLAKDGPEGDKSHVSTRIMGTYG 287
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + I Y
Sbjct: 133 RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRY- 187
Query: 288 YAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE I T DV+S G VL E+L G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 77/187 (41%), Gaps = 36/187 (19%)
Query: 175 HPNLVKLIGYCCEDEHRVL-----IYEFMARGSVENNLFSKVLLPL-----PWSIRMKIA 224
HPN+++ YC E R L + + VE+ S L L P S+ +IA
Sbjct: 86 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDT-------------DYNAKLSDFGLAKDGP 271
G+A LH + +I+RD K NIL+ T + +SDFGL K
Sbjct: 144 ----SGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 197
Query: 272 EGDKSHVST--RIMGTYGYAAPEYI---MTGHLTPRSDVYSFGVVLLEILTGRKSLDKSR 326
G GT G+ APE + LT D++S G V IL+ K +
Sbjct: 198 SGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 257
Query: 327 PAREQNL 333
+RE N+
Sbjct: 258 YSRESNI 264
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNA-KLSDFGLAKDGPEGDKSHVSTRIMGTYG 287
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + I Y
Sbjct: 145 RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRY- 199
Query: 288 YAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE I T DV+S G VL E+L G+
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 15/186 (8%)
Query: 140 GLQPVPVAVKVHDGDNSYQG-HREWLA-EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEF 197
GLQ +K +S +G RE + EV L + HPN++ L +LI E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 198 MARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDY 257
+A G + + L K L + G+ +LH + + + D K NI+L D
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLHSLQ--IAHFDLKPENIML-LDR 150
Query: 258 NA-----KLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
N K+ DFGLA G++ I GT + APE + L +D++S GV+
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207
Query: 313 LEILTG 318
+L+G
Sbjct: 208 YILLSG 213
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNA-KLSDFGLAKDGPEGDKSHVSTRIMGTYG 287
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + I Y
Sbjct: 137 RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRY- 191
Query: 288 YAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE I T DV+S G VL E+L G+
Sbjct: 192 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 229 KGLAFLHEAEKPVIYRDFKTSNILLDTDYNA-KLSDFGLAKDGPEGDKSHVSTRIMGTYG 287
+ LA++H + +RD K N+LLD D KL DFG AK G+ + + I Y
Sbjct: 167 RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRY- 221
Query: 288 YAAPEYIMTG-HLTPRSDVYSFGVVLLEILTGR 319
Y APE I T DV+S G VL E+L G+
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 233 FLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR---IMGTYGYA 289
+LH + +IYRD K N+++D K++DFG AK V R + GT Y
Sbjct: 157 YLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYL 206
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTG 318
APE I++ D ++ GV++ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 233 FLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR---IMGTYGYA 289
+LH + +IYRD K N+++D K++DFG AK V R + GT Y
Sbjct: 157 YLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYL 206
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTG 318
APE I++ D ++ GV++ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 116/290 (40%), Gaps = 47/290 (16%)
Query: 128 VYKGFISEDLREG-LQPVPVAVKVHDGDNSYQGHREWLAEVIF-----LGHLSHPNLVKL 181
++KG E G L V +KV D + HR + +E F + LSH +LV
Sbjct: 24 IFKGVRREVGDYGQLHETEVLLKVLD-----KAHRNY-SESFFEAASMMSKLSHKHLVLN 77
Query: 182 IGYCCEDEHRVLIYEFMARGSVENNL-FSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKP 240
G C + +L+ EF+ GS++ L +K + + W ++++A A + FL E
Sbjct: 78 YGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAMHFLE--ENT 133
Query: 241 VIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR--IMGTYGYAAPEYIMT-G 297
+I+ + NILL + + K + K G V + + + PE I
Sbjct: 134 LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPK 193
Query: 298 HLTPRSDVYSFGVVLLEILTGR----KSLDKSRPAREQNLADWAXXXXXXXXXXXNIIDP 353
+L +D +SFG L EI +G +LD R + Q D
Sbjct: 194 NLNLATDKWSFGTTLWEICSGGDKPLSALDSQR--KLQFYED------------------ 233
Query: 354 RLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVDSLEPLQVLPDEAP 403
P + A L +C+++ P RP R I+ L L PD P
Sbjct: 234 --RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL-FTPDLVP 280
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Query: 192 VLIYEFMARGSVENNLFSKVLLPLPWSIR----MKIAFGAAKGLAFLHEAEKPVIYRDFK 247
+LI E+ A G + FS L L + +++ +G+ +LH+ +++ D K
Sbjct: 105 ILILEYAAGGEI----FSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ--NNIVHLDLK 158
Query: 248 TSNILLDTDY---NAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSD 304
NILL + Y + K+ DFG+++ + IMGT Y APE + +T +D
Sbjct: 159 PQNILLSSIYPLGDIKIVDFGMSRKIGHACELR---EIMGTPEYLAPEILNYDPITTATD 215
Query: 305 VYSFGVVLLEILT 317
+++ G++ +LT
Sbjct: 216 MWNIGIIAYMLLT 228
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 233 FLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR---IMGTYGYA 289
+LH + +IYRD K N+++D K++DFG AK V R + GT Y
Sbjct: 157 YLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYL 206
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTG 318
APE I++ D ++ GV++ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 15/186 (8%)
Query: 140 GLQPVPVAVKVHDGDNSYQG-HREWLA-EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEF 197
GLQ +K +S +G RE + EV L + HPN++ L +LI E
Sbjct: 35 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 94
Query: 198 MARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDY 257
+A G + + L K L + G+ +LH + + + D K NI+L D
Sbjct: 95 VAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLHSLQ--IAHFDLKPENIML-LDR 149
Query: 258 NA-----KLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
N K+ DFGLA G++ I GT + APE + L +D++S GV+
Sbjct: 150 NVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 206
Query: 313 LEILTG 318
+L+G
Sbjct: 207 YILLSG 212
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 15/186 (8%)
Query: 140 GLQPVPVAVKVHDGDNSYQG-HREWLA-EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEF 197
GLQ +K +S +G RE + EV L + HPN++ L +LI E
Sbjct: 35 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 94
Query: 198 MARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDY 257
+A G + + L K L + G+ +LH + + + D K NI+L D
Sbjct: 95 VAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLHSLQ--IAHFDLKPENIML-LDR 149
Query: 258 NA-----KLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
N K+ DFGLA G++ I GT + APE + L +D++S GV+
Sbjct: 150 NVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 206
Query: 313 LEILTG 318
+L+G
Sbjct: 207 YILLSG 212
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 15/186 (8%)
Query: 140 GLQPVPVAVKVHDGDNSYQG-HREWLA-EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEF 197
GLQ +K +S +G RE + EV L + HPN++ L +LI E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 198 MARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDY 257
+A G + + L K L + G+ +LH + + + D K NI+L D
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLHSLQ--IAHFDLKPENIML-LDR 150
Query: 258 NA-----KLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
N K+ DFGLA G++ I GT + APE + L +D++S GV+
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207
Query: 313 LEILTG 318
+L+G
Sbjct: 208 YILLSG 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 15/186 (8%)
Query: 140 GLQPVPVAVKVHDGDNSYQG-HREWLA-EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEF 197
GLQ +K +S +G RE + EV L + HPN++ L +LI E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 198 MARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDY 257
+A G + + L K L + G+ +LH + + + D K NI+L D
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLHSLQ--IAHFDLKPENIML-LDR 150
Query: 258 NA-----KLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
N K+ DFGLA G++ I GT + APE + L +D++S GV+
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207
Query: 313 LEILTG 318
+L+G
Sbjct: 208 YILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 15/186 (8%)
Query: 140 GLQPVPVAVKVHDGDNSYQG-HREWLA-EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEF 197
GLQ +K +S +G RE + EV L + HPN++ L +LI E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 198 MARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDY 257
+A G + + L K L + G+ +LH + + + D K NI+L D
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLHSLQ--IAHFDLKPENIML-LDR 150
Query: 258 NA-----KLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
N K+ DFGLA G++ I GT + APE + L +D++S GV+
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207
Query: 313 LEILTG 318
+L+G
Sbjct: 208 YILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 15/186 (8%)
Query: 140 GLQPVPVAVKVHDGDNSYQG-HREWLA-EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEF 197
GLQ +K +S +G RE + EV L + HPN++ L +LI E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 198 MARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDY 257
+A G + + L K L + G+ +LH + + + D K NI+L D
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLHSLQ--IAHFDLKPENIML-LDR 150
Query: 258 NA-----KLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
N K+ DFGLA G++ I GT + APE + L +D++S GV+
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207
Query: 313 LEILTG 318
+L+G
Sbjct: 208 YILLSG 213
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++A G +FS + +S
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE----MFSHLRRIGRFSEPHAR 144
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+L+D +++DFG AK V R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT APE I++ D ++ GV++ E+ G
Sbjct: 197 XLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 15/186 (8%)
Query: 140 GLQPVPVAVKVHDGDNSYQG-HREWLA-EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEF 197
GLQ +K +S +G RE + EV L + HPN++ L +LI E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 198 MARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDY 257
+A G + + L K L + G+ +LH + + + D K NI+L D
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLHSLQ--IAHFDLKPENIML-LDR 150
Query: 258 NA-----KLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
N K+ DFGLA G++ I GT + APE + L +D++S GV+
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207
Query: 313 LEILTG 318
+L+G
Sbjct: 208 YILLSG 213
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 22/152 (14%)
Query: 179 VKLIGYCCEDE-HRVLIYEFMARGSVENNLFSKVLLPLPWSI------RMKIAFGAAKGL 231
+ + Y +DE H L+ ++ G + L SK LP + M +A + L
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLT-LLSKFEDKLPEDMARFYIGEMVLAIDSIHQL 194
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAP 291
++H RD K N+LLD + + +L+DFG + D + S+ +GT Y +P
Sbjct: 195 HYVH--------RDIKPDNVLLDVNGHIRLADFGSCLKMND-DGTVQSSVAVGTPDYISP 245
Query: 292 EYIMT-----GHLTPRSDVYSFGVVLLEILTG 318
E + G P D +S GV + E+L G
Sbjct: 246 EILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 277
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 15/186 (8%)
Query: 140 GLQPVPVAVKVHDGDNSYQG-HREWLA-EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEF 197
GLQ +K +S +G RE + EV L + HPN++ L +LI E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 198 MARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDY 257
+A G + + L K L + G+ +LH + + + D K NI+L D
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLHSLQ--IAHFDLKPENIML-LDR 150
Query: 258 NA-----KLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
N K+ DFGLA G++ I GT + APE + L +D++S GV+
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207
Query: 313 LEILTG 318
+L+G
Sbjct: 208 YILLSG 213
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 21/161 (13%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++ G + ++L P +
Sbjct: 82 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHA----- 136
Query: 224 AFGAAK---GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVST 280
F AA+ +LH + +IYRD K N+L+D +++DFG AK V
Sbjct: 137 RFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 186
Query: 281 R---IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
R + GT Y APE I++ D ++ GV++ E+ G
Sbjct: 187 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV L + HPN++ L VLI E ++ G + + L K L + +
Sbjct: 65 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 124
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNA-----KLSDFGLAKDGPEGDKSHVST 280
G+ +LH K + + D K NI+L D N KL DFG+A G++
Sbjct: 125 --LDGVHYLHS--KRIAHFDLKPENIML-LDKNVPNPRIKLIDFGIAHKIEAGNEF---K 176
Query: 281 RIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
I GT + APE + L +D++S GV+ +L+G
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 21/161 (13%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++ G + ++L P +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHA----- 143
Query: 224 AFGAAK---GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVST 280
F AA+ +LH + +IYRD K N+L+D +++DFG AK V
Sbjct: 144 RFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 281 R---IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
R + GT Y APE I++ D ++ GV++ E+ G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 21/161 (13%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++ G + ++L P +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHA----- 143
Query: 224 AFGAAK---GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVST 280
F AA+ +LH + +IYRD K N+L+D +++DFG AK V
Sbjct: 144 RFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 281 R---IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
R + GT Y APE I++ D ++ GV++ E+ G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 21/161 (13%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E++ G + ++L P +
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHA----- 144
Query: 224 AFGAAK---GLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVST 280
F AA+ +LH + +IYRD K N+L+D +++DFG AK V
Sbjct: 145 RFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 194
Query: 281 R---IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
R + GT Y APE I++ D ++ GV++ E+ G
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 22/152 (14%)
Query: 179 VKLIGYCCEDE-HRVLIYEFMARGSVENNLFSKVLLPLPWSI------RMKIAFGAAKGL 231
+ + Y +DE H L+ ++ G + L SK LP + M +A + L
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLT-LLSKFEDKLPEDMARFYIGEMVLAIDSIHQL 210
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAP 291
++H RD K N+LLD + + +L+DFG + D + S+ +GT Y +P
Sbjct: 211 HYVH--------RDIKPDNVLLDVNGHIRLADFGSCLKMND-DGTVQSSVAVGTPDYISP 261
Query: 292 EYIMT-----GHLTPRSDVYSFGVVLLEILTG 318
E + G P D +S GV + E+L G
Sbjct: 262 EILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 293
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 15/186 (8%)
Query: 140 GLQPVPVAVKVHDGDNSYQG-HREWLA-EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEF 197
GLQ +K +S +G RE + EV L + HPN++ L +LI E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 198 MARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDY 257
+A G + + L K L + G+ +LH + + + D K NI+L D
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLHSLQ--IAHFDLKPENIML-LDR 150
Query: 258 NA-----KLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
N K+ DFGLA G++ I GT + APE + L +D++S GV+
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207
Query: 313 LEILTG 318
+L+G
Sbjct: 208 YILLSG 213
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 15/158 (9%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E L ++ P LVKL ++ + ++ E+ G +FS + +S
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGE----MFSHLRRIGRFSEPHAR 144
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR-- 281
+ A L F + +IYRD K N+++D +++DFG AK V R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 282 -IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y APE I++ D ++ GV++ E+ G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 119/291 (40%), Gaps = 49/291 (16%)
Query: 128 VYKGFISEDLREG-LQPVPVAVKVHDGDNSYQGHREWLAEVIF-----LGHLSHPNLVKL 181
++KG E G L V +KV D + HR + +E F + LSH +LV
Sbjct: 24 IFKGVRREVGDYGQLHETEVLLKVLD-----KAHRNY-SESFFEAASMMSKLSHKHLVLN 77
Query: 182 IGYC-CEDEHRVLIYEFMARGSVENNL-FSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEK 239
G C C DE+ +L+ EF+ GS++ L +K + + W ++++A A + FL E
Sbjct: 78 YGVCFCGDEN-ILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMHFLE--EN 132
Query: 240 PVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTR--IMGTYGYAAPEYIMT- 296
+I+ + NILL + + K + K G V + + + PE I
Sbjct: 133 TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENP 192
Query: 297 GHLTPRSDVYSFGVVLLEILTG----RKSLDKSRPAREQNLADWAXXXXXXXXXXXNIID 352
+L +D +SFG L EI +G +LD R + Q D
Sbjct: 193 KNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR--KLQFYED----------------- 233
Query: 353 PRLEGDYPVKGVHKAAMLAYHCLNHNPKARPLMRDIVDSLEPLQVLPDEAP 403
P + A L +C+++ P RP R I+ L L PD P
Sbjct: 234 ---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL-FTPDLVP 280
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV L + HPN++ L VLI E ++ G + + L K L + +
Sbjct: 58 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 117
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNA-----KLSDFGLAKDGPEGDKSHVST 280
G+ +LH K + + D K NI+L D N KL DFG+A G++
Sbjct: 118 --LDGVHYLHS--KRIAHFDLKPENIML-LDKNVPNPRIKLIDFGIAHKIEAGNEF---K 169
Query: 281 RIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
I GT + APE + L +D++S GV+ +L+G
Sbjct: 170 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIR-MKIA 224
E+ + L HPN+++L ++ L+ E G + + K + + R MK
Sbjct: 56 EIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDV 115
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDKSHVSTR 281
A +A+ H+ V +RD K N L T D KL DFGLA G + T+
Sbjct: 116 LSA---VAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG--KMMRTK 168
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y +P+ ++ G P D +S GV++ +L G
Sbjct: 169 V-GTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIR-MKIA 224
E+ + L HPN+++L ++ L+ E G + + K + + R MK
Sbjct: 73 EIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDV 132
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDT---DYNAKLSDFGLAKDGPEGDKSHVSTR 281
A +A+ H+ V +RD K N L T D KL DFGLA G + T+
Sbjct: 133 LSA---VAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG--KMMRTK 185
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+ GT Y +P+ ++ G P D +S GV++ +L G
Sbjct: 186 V-GTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 27/180 (15%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV+ H N+V +G C H +I + +G ++ + L + +IA
Sbjct: 79 EVMAYRQTRHENVVLFMGACMSPPHLAIITS-LCKGRTLYSVVRDAKIVLDVNKTRQIAQ 137
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGL------AKDGPEGDKSHVS 279
KG+ +LH K ++++D K+ N+ D ++DFGL + G DK +
Sbjct: 138 EIVKGMGYLH--AKGILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQ 194
Query: 280 TRIMGTYGYAAPEYIMTGHLTP-----------RSDVYSFGVVLLEILTGRKSLDKSRPA 328
G + APE I L+P SDV++ G + E L R+ K++PA
Sbjct: 195 N---GWLCHLAPEIIR--QLSPDTEEDKLPFSKHSDVFALGTIWYE-LHAREWPFKTQPA 248
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 15/186 (8%)
Query: 140 GLQPVPVAVKVHDGDNSYQG-HREWLA-EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEF 197
GLQ +K +S +G RE + EV L + HPN++ L +LI E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGEL 95
Query: 198 MARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDY 257
+A G + + L K L + G+ +LH + + + D K NI+L D
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLHSLQ--IAHFDLKPENIML-LDR 150
Query: 258 NA-----KLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVL 312
N K+ DFGLA G++ I GT + APE + L +D++S GV+
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207
Query: 313 LEILTG 318
+L+G
Sbjct: 208 YILLSG 213
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
E+I L HPN+V+ H ++ E+ + G LF ++ +S F
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE----LFERICNAGRFSEDEARFF 120
Query: 226 --GAAKGLAFLHEAEKPVIYRDFKTSNILLDTD--YNAKLSDFGLAKDGPEGDKSHVSTR 281
G+++ H + V +RD K N LLD K++DFG +K + +
Sbjct: 121 FQQLISGVSYAHAMQ--VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA-- 176
Query: 282 IMGTYGYAAPEYIMTGHLTPR-SDVYSFGVVLLEILTG 318
+GT Y APE ++ + +DV+S GV L +L G
Sbjct: 177 -VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
EV L + HPN++ L VLI E ++ G + + L K L + +
Sbjct: 79 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 138
Query: 226 GAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNA-----KLSDFGLAKDGPEGDKSHVST 280
G+ +LH K + + D K NI+L D N KL DFG+A G++
Sbjct: 139 --LDGVHYLHS--KRIAHFDLKPENIML-LDKNVPNPRIKLIDFGIAHKIEAGNEF---K 190
Query: 281 RIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
I GT + APE + L +D++S GV+ +L+G
Sbjct: 191 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
Query: 173 LSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLA 232
L HPN+V+L E+ L+++ + G + ++ ++ + A
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY------------YSEADASH 134
Query: 233 FLHEA--------EKPVIYRDFKTSNILLDTDYNA---KLSDFGLAKDGPEGDKSHVSTR 281
+H+ + +++RD K N+LL + KL+DFGLA + +G++
Sbjct: 135 CIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIE-VQGEQ-QAWFG 192
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
GT GY +PE + D+++ GV+L +L G
Sbjct: 193 FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 14/158 (8%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
E+I L HPN+V+ H ++ E+ + G LF ++ +S F
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE----LFERICNAGRFSEDEARFF 120
Query: 226 --GAAKGLAFLHEAEKPVIYRDFKTSNILLDTD--YNAKLSDFGLAKDGPEGDKSHVSTR 281
G+++ H + V +RD K N LLD K+ DFG +K + +
Sbjct: 121 FQQLISGVSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-- 176
Query: 282 IMGTYGYAAPEYIMTGHLTPR-SDVYSFGVVLLEILTG 318
+GT Y APE ++ + +DV+S GV L +L G
Sbjct: 177 -VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 14/158 (8%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
E+I L HPN+V+ H ++ E+ + G LF ++ +S F
Sbjct: 64 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE----LFERICNAGRFSEDEARFF 119
Query: 226 --GAAKGLAFLHEAEKPVIYRDFKTSNILLDTD--YNAKLSDFGLAKDGPEGDKSHVSTR 281
G+++ H + V +RD K N LLD K+ DFG +K + +
Sbjct: 120 FQQLISGVSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-- 175
Query: 282 IMGTYGYAAPEYIMTGHLTPR-SDVYSFGVVLLEILTG 318
+GT Y APE ++ + +DV+S GV L +L G
Sbjct: 176 -VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 35/146 (23%)
Query: 193 LIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLH------EAEKPVIYRDF 246
LI ++ GS+ + L S L +K+A+ + GL LH + + + +RD
Sbjct: 112 LITDYHENGSLYDYLKSTTLDA---KSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDL 168
Query: 247 KTSNILLDTDYNAKLSDFGLA----KDGPEGDKSHVSTRIMGTYGYAAPE---------- 292
K+ NIL+ + ++D GLA D E D +TR+ GT Y PE
Sbjct: 169 KSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPP-NTRV-GTKRYMPPEVLDESLNRNH 226
Query: 293 ---YIMTGHLTPRSDVYSFGVVLLEI 315
YIM +D+YSFG++L E+
Sbjct: 227 FQSYIM-------ADMYSFGLILWEV 245
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 239 KPVIYRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTG- 297
K +I+RD K NI++ D+ KL DFG A G + GT Y APE +M
Sbjct: 149 KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT---FCGTIEYCAPEVLMGNP 205
Query: 298 HLTPRSDVYSFGVVL 312
+ P +++S GV L
Sbjct: 206 YRGPELEMWSLGVTL 220
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 78/191 (40%), Gaps = 40/191 (20%)
Query: 175 HPNLVKLIGYCCEDEHRVL-----IYEFMARGSVENNLFSKVLLPL-----PWSIRMKIA 224
HPN+++ YC E R L + + VE+ S L L P S+ +IA
Sbjct: 68 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 225 FGAAKGLAFLHEAEKPVIYRDFKTSNILLDT-------------DYNAKLSDFGLAKDGP 271
G+A LH + +I+RD K NIL+ T + +SDFGL K
Sbjct: 126 ----SGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
Query: 272 EGDKSHVST--RIMGTYGYAAPEYIMTGH-------LTPRSDVYSFGVVLLEILTGRKSL 322
G GT G+ APE + + LT D++S G V IL+ K
Sbjct: 180 SGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
Query: 323 DKSRPAREQNL 333
+ +RE N+
Sbjct: 240 FGDKYSRESNI 250
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 156 SYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPL 215
S + H++ E L HPN+V+L E+ L+++ + G + ++ ++
Sbjct: 43 SARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR----- 97
Query: 216 PWSIRMKIAFGAAKGLAFLHEAE-KPVIYRDFKTSNILLDTDYNA---KLSDFGLAKDGP 271
+ + + L ++ +++RD K N+LL + KL+DFGLA +
Sbjct: 98 EYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIE-V 156
Query: 272 EGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+GD+ GT GY +PE + D+++ GV+L +L G
Sbjct: 157 QGDQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 156 SYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPL 215
S + H++ E L HPN+V+L E+ L+++ + G + ++ ++
Sbjct: 43 SARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR----- 97
Query: 216 PWSIRMKIAFGAAKGLAFLHEAE-KPVIYRDFKTSNILLDTDYNA---KLSDFGLAKDGP 271
+ + + L ++ +++RD K N+LL + KL+DFGLA +
Sbjct: 98 EYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIE-V 156
Query: 272 EGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
+GD+ GT GY +PE + D+++ GV+L +L G
Sbjct: 157 QGDQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 14/158 (8%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
E+I L HPN+V+ H +I E+ + G L+ ++ +S F
Sbjct: 66 EIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGG----ELYERICNAGRFSEDEARFF 121
Query: 226 --GAAKGLAFLHEAEKPVIYRDFKTSNILLDTD--YNAKLSDFGLAKDGPEGDKSHVSTR 281
G+++ H + + +RD K N LLD K+ DFG +K + +
Sbjct: 122 FQQLLSGVSYCHSMQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-- 177
Query: 282 IMGTYGYAAPEYIMTGHLTPR-SDVYSFGVVLLEILTG 318
+GT Y APE ++ + +DV+S GV L +L G
Sbjct: 178 -VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 16/113 (14%)
Query: 215 LPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGL-------- 266
+P I KIA K L LH ++ VI+RD K SN+L++ K DFG+
Sbjct: 133 IPEDILGKIAVSIVKALEHLH-SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDV 191
Query: 267 AKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTGR 319
AKD G K + + + PE G+ + +SD++S G+ +E+ R
Sbjct: 192 AKDIDAGCKPYXAPERIN------PELNQKGY-SVKSDIWSLGITXIELAILR 237
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 32/183 (17%)
Query: 164 LAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKI 223
L E+ L L+H ++VK++ + E + ++ F K+ + + I
Sbjct: 100 LREIAILNRLNHDHVVKVLDIVIPKDVEKF-DELYVVLEIADSDFKKLFRTPVYLTELHI 158
Query: 224 A---FGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGLAK--DGPEGDKS-- 276
+ G+ ++H A +++RD K +N L++ D + K+ DFGLA+ D PE S
Sbjct: 159 KTLLYNLLVGVKYVHSA--GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQL 216
Query: 277 ------------------HVSTRIMG---TYGYAAPEYI-MTGHLTPRSDVYSFGVVLLE 314
++ ++ G T Y APE I + + T DV+S G + E
Sbjct: 217 PISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAE 276
Query: 315 ILT 317
+L
Sbjct: 277 LLN 279
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 155 NSYQGHREWLAEVIFLGHLSHP------NLVKLIGYCCEDEHRVLIYEFMARGSVE---N 205
N + HR+ E+ L HL N++ ++ H + +E ++ E
Sbjct: 132 NEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKK 191
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNA--KLSD 263
N F LPL +R K A + L LH+ +I+ D K NILL + K+ D
Sbjct: 192 NKFQGFSLPL---VR-KFAHSILQCLDALHKNR--IIHCDLKPENILLKQQGRSGIKVID 245
Query: 264 FGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
FG + + V T I + Y APE I+ D++S G +L E+LTG
Sbjct: 246 FGSSCY----EHQRVYTXIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 5/149 (3%)
Query: 173 LSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLA 232
L HP++V+L+ D +++EFM + + + +S + + A
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 233 FLHEAEKPVIYRDFKTSNILLDTDYNA---KLSDFGLAKDGPEGDKSHVSTRIMGTYGYA 289
+ + +I+RD K +LL + N+ KL FG+A G+ V+ +GT +
Sbjct: 143 LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGGRVGTPHFM 200
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTG 318
APE + DV+ GV+L +L+G
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 155 NSYQGHREWLAEVIFLGHLSHP------NLVKLIGYCCEDEHRVLIYEFMARGSVE---N 205
N + HR+ E+ L HL N++ ++ H + +E ++ E
Sbjct: 132 NEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKK 191
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNA--KLSD 263
N F LPL +R K A + L LH+ +I+ D K NILL + K+ D
Sbjct: 192 NKFQGFSLPL---VR-KFAHSILQCLDALHKNR--IIHCDLKPENILLKQQGRSGIKVID 245
Query: 264 FGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
FG + + V T I + Y APE I+ D++S G +L E+LTG
Sbjct: 246 FGSSCY----EHQRVYTXIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 12/157 (7%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLF--SKVLLPLPWSIRMKI 223
E+ + L H NL++L VL+ E++ G + + + S L L + MK
Sbjct: 136 EISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK- 194
Query: 224 AFGAAKGLAFLHEAEKPVIYRDFKTSNIL-LDTDYNA-KLSDFGLAKDGPEGDKSHVSTR 281
+G+ +H+ +++ D K NIL ++ D K+ DFGLA+ +K V+
Sbjct: 195 --QICEGIRHMHQM--YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN-- 248
Query: 282 IMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
GT + APE + ++ +D++S GV+ +L+G
Sbjct: 249 -FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 39/182 (21%)
Query: 165 AEVIFLGHL--SHPN----LVKLIGYCCEDEHRVLIYEFMARGS---VENNLFSKVLLPL 215
+E+ L HL + PN V+++ + H +++E + + ++ N F LP
Sbjct: 60 SEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGF----LPF 115
Query: 216 PWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNIL-LDTDY----------------- 257
K+A+ K + FLH + + + D K NIL + +DY
Sbjct: 116 RLDHIRKMAYQICKSVNFLHSNK--LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLIN 173
Query: 258 -NAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEIL 316
+ K+ DFG A E + VSTR Y APE I+ + DV+S G +L+E
Sbjct: 174 PDIKVVDFGSATYDDEHHSTLVSTR-----HYRAPEVILALGWSQPCDVWSIGCILIEYY 228
Query: 317 TG 318
G
Sbjct: 229 LG 230
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 26/171 (15%)
Query: 166 EVIFLGHLSHPNLVKL--IGYCCEDEHRVLIYEF----------MARGSVENNLFSKVLL 213
E+ L L HPN++ L + D L++++ R S N K +
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKAN----KKPV 123
Query: 214 PLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDY----NAKLSDFGLAK- 268
LP + + + G+ +LH V++RD K +NIL+ + K++D G A+
Sbjct: 124 QLPRGMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVKIADMGFARL 181
Query: 269 -DGPEGDKSHVSTRIMGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLLEILT 317
+ P + + ++ T+ Y APE ++ H T D+++ G + E+LT
Sbjct: 182 FNSPLKPLADLDPVVV-TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 231
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 5/149 (3%)
Query: 173 LSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLA 232
L HP++V+L+ D +++EFM + + + +S + + A
Sbjct: 85 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 144
Query: 233 FLHEAEKPVIYRDFKTSNILLDTDYNA---KLSDFGLAKDGPEGDKSHVSTRIMGTYGYA 289
+ + +I+RD K +LL + N+ KL FG+A G+ V+ +GT +
Sbjct: 145 LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGGRVGTPHFM 202
Query: 290 APEYIMTGHLTPRSDVYSFGVVLLEILTG 318
APE + DV+ GV+L +L+G
Sbjct: 203 APEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 22/94 (23%)
Query: 231 LAFLHEAEKPVIYRDFKTSNILLDTDYNAKLSDFGL--------AKDGPEGDKSHVSTRI 282
LA H + +++ D K +NI L KL DFGL A + EGD +++ +
Sbjct: 168 LALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPEL 227
Query: 283 M-GTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEI 315
+ G+YG AA DV+S G+ +LE+
Sbjct: 228 LQGSYGTAA-------------DVFSLGLTILEV 248
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 80/185 (43%), Gaps = 13/185 (7%)
Query: 140 GLQPVPVAVKVHDGDNSYQG--HREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEF 197
GL+ +K S +G E EV L + H N++ L VLI E
Sbjct: 37 GLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILEL 96
Query: 198 MARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNI-LLDTD 256
++ G + + L K L + G+ +LH K + + D K NI LLD +
Sbjct: 97 VSGGELFDFLAQKESLSEEEA--TSFIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKN 152
Query: 257 Y---NAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLL 313
+ KL DFGLA + +G + I GT + APE + L +D++S GV+
Sbjct: 153 IPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 314 EILTG 318
+L+G
Sbjct: 210 ILLSG 214
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 19/140 (13%)
Query: 193 LIYEFMARGSVENNLFSKVLL-PLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNI 251
L++E M GS+ +++ + L S+ ++ A L FLH K + +RD K NI
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQ---DVASALDFLH--NKGIAHRDLKPENI 142
Query: 252 LLDTDYN---AKLSDFGLAKD-GPEGDKSHVSTRIM----GTYGYAAPEYI-----MTGH 298
L + K+ DFGL GD S +ST + G+ Y APE +
Sbjct: 143 LCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASI 202
Query: 299 LTPRSDVYSFGVVLLEILTG 318
R D++S GV+L +L+G
Sbjct: 203 YDKRCDLWSLGVILYILLSG 222
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 80/185 (43%), Gaps = 13/185 (7%)
Query: 140 GLQPVPVAVKVHDGDNSYQG--HREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEF 197
GL+ +K S +G E EV L + H N++ L VLI E
Sbjct: 37 GLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILEL 96
Query: 198 MARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNI-LLDTD 256
++ G + + L K L + G+ +LH K + + D K NI LLD +
Sbjct: 97 VSGGELFDFLAQKESLSEEEA--TSFIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKN 152
Query: 257 Y---NAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLL 313
+ KL DFGLA + +G + I GT + APE + L +D++S GV+
Sbjct: 153 IPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 314 EILTG 318
+L+G
Sbjct: 210 ILLSG 214
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 146 VAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHR--------VLIY-- 195
VA+K D ++ + ++ HPN+V L + + + VL Y
Sbjct: 67 VAIKKVLQDKRFKNRELQIMRIV-----KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP 121
Query: 196 EFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDT 255
E + R S ++K+ +P + + + LA++H + +RD K N+LLD
Sbjct: 122 ETVYRASRH---YAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG--ICHRDIKPQNLLLDP 176
Query: 256 DYNA-KLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTG-HLTPRSDVYSFGVVLL 313
KL DFG AK G+ + + I Y Y APE I + T D++S G V+
Sbjct: 177 PSGVLKLIDFGSAKILIAGEPN--VSXICSRY-YRAPELIFGATNYTTNIDIWSTGCVMA 233
Query: 314 EILTGR 319
E++ G+
Sbjct: 234 ELMQGQ 239
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 80/185 (43%), Gaps = 13/185 (7%)
Query: 140 GLQPVPVAVKVHDGDNSYQG--HREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEF 197
GL+ +K S +G E EV L + H N++ L VLI E
Sbjct: 37 GLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILEL 96
Query: 198 MARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNI-LLDTD 256
++ G + + L K L + G+ +LH K + + D K NI LLD +
Sbjct: 97 VSGGELFDFLAQKESLSEEEA--TSFIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKN 152
Query: 257 Y---NAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLL 313
+ KL DFGLA + +G + I GT + APE + L +D++S GV+
Sbjct: 153 IPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 314 EILTG 318
+L+G
Sbjct: 210 ILLSG 214
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 74/175 (42%), Gaps = 22/175 (12%)
Query: 155 NSYQGHREWLAEVIFLGHLSHP------NLVKLIGYCCEDEHRVLIYEFMARGSVE---N 205
N + HR+ E+ L HL N++ ++ H + +E ++ E
Sbjct: 132 NEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKK 191
Query: 206 NLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDTDYNA--KLSD 263
N F LPL +R K A + L LH+ +I+ D K NILL + K+ D
Sbjct: 192 NKFQGFSLPL---VR-KFAHSILQCLDALHKNR--IIHCDLKPENILLKQQGRSGIKVID 245
Query: 264 FGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLEILTG 318
FG + + + +R Y APE I+ D++S G +L E+LTG
Sbjct: 246 FGSSCYEHQRVYXXIQSRF-----YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 80/185 (43%), Gaps = 13/185 (7%)
Query: 140 GLQPVPVAVKVHDGDNSYQG--HREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEF 197
GL+ +K S +G E EV L + H N++ L VLI E
Sbjct: 37 GLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILEL 96
Query: 198 MARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNI-LLDTD 256
++ G + + L K L + G+ +LH K + + D K NI LLD +
Sbjct: 97 VSGGELFDFLAQKESLSEEEA--TSFIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKN 152
Query: 257 Y---NAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLL 313
+ KL DFGLA + +G + I GT + APE + L +D++S GV+
Sbjct: 153 IPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 314 EILTG 318
+L+G
Sbjct: 210 ILLSG 214
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 80/185 (43%), Gaps = 13/185 (7%)
Query: 140 GLQPVPVAVKVHDGDNSYQG--HREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEF 197
GL+ +K S +G E EV L + H N++ L VLI E
Sbjct: 37 GLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILEL 96
Query: 198 MARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNI-LLDTD 256
++ G + + L K L + G+ +LH K + + D K NI LLD +
Sbjct: 97 VSGGELFDFLAQKESLSEEEA--TSFIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKN 152
Query: 257 Y---NAKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLL 313
+ KL DFGLA + +G + I GT + APE + L +D++S GV+
Sbjct: 153 IPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 314 EILTG 318
+L+G
Sbjct: 210 ILLSG 214
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 14/158 (8%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
E+I L HPN+V+ H ++ E+ + G LF ++ +S F
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE----LFERICNAGRFSEDEARFF 120
Query: 226 --GAAKGLAFLHEAEKPVIYRDFKTSNILLDTD--YNAKLSDFGLAKDGPEGDKSHVSTR 281
G+++ H + V +RD K N LLD K+ FG +K + +
Sbjct: 121 FQQLISGVSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST-- 176
Query: 282 IMGTYGYAAPEYIMTGHLTPR-SDVYSFGVVLLEILTG 318
+GT Y APE ++ + +DV+S GV L +L G
Sbjct: 177 -VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 26/125 (20%)
Query: 213 LPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNIL-LDTDYN------------- 258
LP P +AF + + FLH+ + + D K NIL +++DY
Sbjct: 132 LPYPIHQVRHMAFQLCQAVKFLHD--NKLTHTDLKPENILFVNSDYELTYNLEKKRDERS 189
Query: 259 -----AKLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLL 313
++ DFG A D H ST I+ T Y APE I+ + DV+S G ++
Sbjct: 190 VKSTAVRVVDFGSAT----FDHEHHST-IVSTRHYRAPEVILELGWSQPCDVWSIGCIIF 244
Query: 314 EILTG 318
E G
Sbjct: 245 EYYVG 249
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 14/158 (8%)
Query: 166 EVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAF 225
E+I L HPN+V+ H ++ E+ + G LF ++ +S F
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE----LFERICNAGRFSEDEARFF 120
Query: 226 --GAAKGLAFLHEAEKPVIYRDFKTSNILLDTD--YNAKLSDFGLAKDGPEGDKSHVSTR 281
G+++ H + V +RD K N LLD K+ FG +K + +
Sbjct: 121 FQQLISGVSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT-- 176
Query: 282 IMGTYGYAAPEYIMTGHLTPR-SDVYSFGVVLLEILTG 318
+GT Y APE ++ + +DV+S GV L +L G
Sbjct: 177 -VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 93/250 (37%), Gaps = 45/250 (18%)
Query: 173 LSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLA 232
+HPN+V D ++ FMA GS ++ + + + + I G K L
Sbjct: 67 FNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALD 126
Query: 233 FLHEAEKPVIYRDFKTSNILLDTDYNAKLS----DFGLAKDGPEGDKSH----VSTRIMG 284
++H ++R K S+IL+ D LS + + G H S +++
Sbjct: 127 YIHHMG--YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLP 184
Query: 285 TYGYAAPEYI---MTGHLTPRSDVYSFGV-------------------VLLEILTGRKS- 321
+ +PE + + G+ +SD+YS G+ +LLE L G
Sbjct: 185 ---WLSPEVLQQNLQGY-DAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPC 240
Query: 322 -LDKSR-PAREQNLADWAXXXXXXXXXXXNIIDPR-LEGDYPVKGVHKAAMLAYH----- 373
LD S PA E ++ PR GD P H+ +H
Sbjct: 241 LLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQ 300
Query: 374 CLNHNPKARP 383
CL NP ARP
Sbjct: 301 CLQRNPDARP 310
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 241 VIYRDFKTSNILLDTDYNA-KLSDFG---LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMT 296
V++RD K NIL+D + KL DFG L KD V T GT Y+ PE+I
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRY 230
Query: 297 GHLTPRS-DVYSFGVVLLEILTG 318
RS V+S G++L +++ G
Sbjct: 231 HRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 93/250 (37%), Gaps = 45/250 (18%)
Query: 173 LSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLA 232
+HPN+V D ++ FMA GS ++ + + + + I G K L
Sbjct: 83 FNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALD 142
Query: 233 FLHEAEKPVIYRDFKTSNILLDTDYNAKLS----DFGLAKDGPEGDKSH----VSTRIMG 284
++H ++R K S+IL+ D LS + + G H S +++
Sbjct: 143 YIHHMG--YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLP 200
Query: 285 TYGYAAPEYI---MTGHLTPRSDVYSFGV-------------------VLLEILTGRKS- 321
+ +PE + + G+ +SD+YS G+ +LLE L G
Sbjct: 201 ---WLSPEVLQQNLQGY-DAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPC 256
Query: 322 -LDKSR-PAREQNLADWAXXXXXXXXXXXNIIDPR-LEGDYPVKGVHKAAMLAYH----- 373
LD S PA E ++ PR GD P H+ +H
Sbjct: 257 LLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQ 316
Query: 374 CLNHNPKARP 383
CL NP ARP
Sbjct: 317 CLQRNPDARP 326
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 232 AFLHEAEKPVIYRDFKTSNILLDTDYNA-KLSDFG---LAKDGPEGDKSHVSTRIMGTYG 287
A H V++RD K NIL+D + KL DFG L KD V T GT
Sbjct: 122 AVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRV 174
Query: 288 YAAPEYIMTGHLTPRS-DVYSFGVVLLEILTG 318
Y+ PE+I RS V+S G++L +++ G
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 59/148 (39%), Gaps = 27/148 (18%)
Query: 190 HRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTS 249
H + +E + + + E L P P +A+ L FLHE + + + D K
Sbjct: 105 HMCIAFELLGKNTFEF-LKENNFQPYPLPHVRHMAYQLCHALRFLHENQ--LTHTDLKPE 161
Query: 250 NILL-----DTDYNA--------------KLSDFGLAKDGPEGDKSHVSTRIMGTYGYAA 290
NIL +T YN +++DFG A D H +T I+ T Y
Sbjct: 162 NILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT----FDHEHHTT-IVATRHYRP 216
Query: 291 PEYIMTGHLTPRSDVYSFGVVLLEILTG 318
PE I+ DV+S G +L E G
Sbjct: 217 PEVILELGWAQPCDVWSIGCILFEYYRG 244
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 241 VIYRDFKTSNILLDTDYNA-KLSDFG---LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMT 296
V++RD K NIL+D + KL DFG L KD V T GT Y+ PE+I
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRY 202
Query: 297 GHLTPRS-DVYSFGVVLLEILTG 318
RS V+S G++L +++ G
Sbjct: 203 HRYHGRSAAVWSLGILLYDMVCG 225
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 241 VIYRDFKTSNILLDTDYNA-KLSDFG---LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMT 296
V++RD K NIL+D + KL DFG L KD V T GT Y+ PE+I
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRY 187
Query: 297 GHLTPRS-DVYSFGVVLLEILTG 318
RS V+S G++L +++ G
Sbjct: 188 HRYHGRSAAVWSLGILLYDMVCG 210
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 59/148 (39%), Gaps = 27/148 (18%)
Query: 190 HRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTS 249
H + +E + + + E L P P +A+ L FLHE + + + D K
Sbjct: 96 HMCIAFELLGKNTFEF-LKENNFQPYPLPHVRHMAYQLCHALRFLHENQ--LTHTDLKPE 152
Query: 250 NILL-----DTDYNA--------------KLSDFGLAKDGPEGDKSHVSTRIMGTYGYAA 290
NIL +T YN +++DFG A D H +T I+ T Y
Sbjct: 153 NILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT----FDHEHHTT-IVATRHYRP 207
Query: 291 PEYIMTGHLTPRSDVYSFGVVLLEILTG 318
PE I+ DV+S G +L E G
Sbjct: 208 PEVILELGWAQPCDVWSIGCILFEYYRG 235
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 241 VIYRDFKTSNILLDTDYNA-KLSDFG---LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMT 296
V++RD K NIL+D + KL DFG L KD V T GT Y+ PE+I
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRY 202
Query: 297 GHLTPRS-DVYSFGVVLLEILTG 318
RS V+S G++L +++ G
Sbjct: 203 HRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 241 VIYRDFKTSNILLDTDYNA-KLSDFG---LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMT 296
V++RD K NIL+D + KL DFG L KD V T GT Y+ PE+I
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRY 188
Query: 297 GHLTPRS-DVYSFGVVLLEILTG 318
RS V+S G++L +++ G
Sbjct: 189 HRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 241 VIYRDFKTSNILLDTDYNA-KLSDFG---LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMT 296
V++RD K NIL+D + KL DFG L KD V T GT Y+ PE+I
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRY 188
Query: 297 GHLTPRS-DVYSFGVVLLEILTG 318
RS V+S G++L +++ G
Sbjct: 189 HRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 241 VIYRDFKTSNILLDTDYNA-KLSDFG---LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMT 296
V++RD K NIL+D + KL DFG L KD V T GT Y+ PE+I
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRY 230
Query: 297 GHLTPRS-DVYSFGVVLLEILTG 318
RS V+S G++L +++ G
Sbjct: 231 HRYHGRSAAVWSLGILLYDMVCG 253
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 241 VIYRDFKTSNILLDTDYNA-KLSDFG---LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMT 296
V++RD K NIL+D + KL DFG L KD V T GT Y+ PE+I
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRY 215
Query: 297 GHLTPRS-DVYSFGVVLLEILTG 318
RS V+S G++L +++ G
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 241 VIYRDFKTSNILLDTDYNA-KLSDFG---LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMT 296
V++RD K NIL+D + KL DFG L KD V T GT Y+ PE+I
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRY 203
Query: 297 GHLTPRS-DVYSFGVVLLEILTG 318
RS V+S G++L +++ G
Sbjct: 204 HRYHGRSAAVWSLGILLYDMVCG 226
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 241 VIYRDFKTSNILLDTDYNA-KLSDFG---LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMT 296
V++RD K NIL+D + KL DFG L KD V T GT Y+ PE+I
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRY 186
Query: 297 GHLTPRS-DVYSFGVVLLEILTG 318
RS V+S G++L +++ G
Sbjct: 187 HRYHGRSAAVWSLGILLYDMVCG 209
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 241 VIYRDFKTSNILLDTDYNA-KLSDFG---LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMT 296
V++RD K NIL+D + KL DFG L KD V T GT Y+ PE+I
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRY 187
Query: 297 GHLTPRS-DVYSFGVVLLEILTG 318
RS V+S G++L +++ G
Sbjct: 188 HRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 241 VIYRDFKTSNILLDTDYNA-KLSDFG---LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMT 296
V++RD K NIL+D + KL DFG L KD V T GT Y+ PE+I
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRY 216
Query: 297 GHLTPRS-DVYSFGVVLLEILTG 318
RS V+S G++L +++ G
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 241 VIYRDFKTSNILLDTDYNA-KLSDFG---LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMT 296
V++RD K NIL+D + KL DFG L KD V T GT Y+ PE+I
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRY 215
Query: 297 GHLTPRS-DVYSFGVVLLEILTG 318
RS V+S G++L +++ G
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCG 238
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 241 VIYRDFKTSNILLDTDYNA-KLSDFG---LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMT 296
V++RD K NIL+D + KL DFG L KD V T GT Y+ PE+I
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRY 230
Query: 297 GHLTPRS-DVYSFGVVLLEILTG 318
RS V+S G++L +++ G
Sbjct: 231 HRYHGRSAAVWSLGILLYDMVCG 253
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 241 VIYRDFKTSNILLDTDYNA-KLSDFG---LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMT 296
V++RD K NIL+D + KL DFG L KD V T GT Y+ PE+I
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRY 215
Query: 297 GHLTPRS-DVYSFGVVLLEILTG 318
RS V+S G++L +++ G
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 241 VIYRDFKTSNILLDTDYNA-KLSDFG---LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMT 296
V++RD K NIL+D + KL DFG L KD V T GT Y+ PE+I
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRY 203
Query: 297 GHLTPRS-DVYSFGVVLLEILTG 318
RS V+S G++L +++ G
Sbjct: 204 HRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 241 VIYRDFKTSNILLDTDYNA-KLSDFG---LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMT 296
V++RD K NIL+D + KL DFG L KD V T GT Y+ PE+I
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRY 216
Query: 297 GHLTPRS-DVYSFGVVLLEILTG 318
RS V+S G++L +++ G
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 241 VIYRDFKTSNILLDTDYNA-KLSDFG---LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMT 296
V++RD K NIL+D + KL DFG L KD V T GT Y+ PE+I
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRY 203
Query: 297 GHLTPRS-DVYSFGVVLLEILTG 318
RS V+S G++L +++ G
Sbjct: 204 HRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 241 VIYRDFKTSNILLDTDYNA-KLSDFG---LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMT 296
V++RD K NIL+D + KL DFG L KD V T GT Y+ PE+I
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRY 216
Query: 297 GHLTPRS-DVYSFGVVLLEILTG 318
RS V+S G++L +++ G
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 241 VIYRDFKTSNILLDTDYNA-KLSDFG---LAKDGPEGDKSHVSTRIMGTYGYAAPEYIMT 296
V++RD K NIL+D + KL DFG L KD V T GT Y+ PE+I
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRY 215
Query: 297 GHLTPRS-DVYSFGVVLLEILTG 318
RS V+S G++L +++ G
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCG 238
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,977,819
Number of Sequences: 62578
Number of extensions: 533304
Number of successful extensions: 3400
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 217
Number of HSP's that attempted gapping in prelim test: 1138
Number of HSP's gapped (non-prelim): 1136
length of query: 429
length of database: 14,973,337
effective HSP length: 102
effective length of query: 327
effective length of database: 8,590,381
effective search space: 2809054587
effective search space used: 2809054587
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)