BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014190
(429 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q12972|PP1R8_HUMAN Nuclear inhibitor of protein phosphatase 1 OS=Homo sapiens
GN=PPP1R8 PE=1 SV=2
Length = 351
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 76/118 (64%), Gaps = 3/118 (2%)
Query: 91 PDWAIEPRSSVYYLDVLKDGEILDRINLDRRRH-IFGRQFQTCDFVLDHQSISRQHAAVI 149
P WA +P ++ LDV+K ++++++ +D +++ +FGR CDF +DHQS SR HAA++
Sbjct: 17 PTWAGKPPPGLH-LDVVKGDKLIEKLIIDEKKYYLFGRNPDLCDFTIDHQSCSRVHAALV 75
Query: 150 PHKN-GSIYVIDLGSAHGTFVANERLTKETPVELEVGQSLRFAASTRTYILRKNTDAL 206
HK+ +++IDL S HGTF+ + RL P ++ + ++ F ASTR Y LR+ L
Sbjct: 76 YHKHLKRVFLIDLNSTHGTFLGHIRLEPHKPQQIPIDSTVSFGASTRAYTLREKPQTL 133
>sp|Q28147|PP1R8_BOVIN Nuclear inhibitor of protein phosphatase 1 OS=Bos taurus GN=PPP1R8
PE=1 SV=1
Length = 351
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 76/118 (64%), Gaps = 3/118 (2%)
Query: 91 PDWAIEPRSSVYYLDVLKDGEILDRINLDRRRH-IFGRQFQTCDFVLDHQSISRQHAAVI 149
P WA +P ++ LDV+K ++++++ +D +++ +FGR CDF +DHQS SR HAA++
Sbjct: 17 PTWAGKPPPGLH-LDVVKGDKLIEKLIIDEKKYYLFGRNPDLCDFTIDHQSCSRVHAALV 75
Query: 150 PHKN-GSIYVIDLGSAHGTFVANERLTKETPVELEVGQSLRFAASTRTYILRKNTDAL 206
HK+ +++IDL S HGTF+ + RL P ++ + ++ F ASTR Y LR+ L
Sbjct: 76 YHKHLKRVFLIDLNSTHGTFLGHIRLEPHKPQQIPIDSTVSFGASTRAYTLREKPQTL 133
>sp|Q8R3G1|PP1R8_MOUSE Nuclear inhibitor of protein phosphatase 1 OS=Mus musculus
GN=Ppp1r8 PE=1 SV=1
Length = 351
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 76/118 (64%), Gaps = 3/118 (2%)
Query: 91 PDWAIEPRSSVYYLDVLKDGEILDRINLDRRRH-IFGRQFQTCDFVLDHQSISRQHAAVI 149
P WA +P ++ LDV+K ++++++ +D +++ +FGR CDF +DHQS SR HAA++
Sbjct: 17 PTWAGKPPPGLH-LDVVKGDKLIEKLIIDEKKYYLFGRNPDLCDFTIDHQSCSRVHAALV 75
Query: 150 PHKN-GSIYVIDLGSAHGTFVANERLTKETPVELEVGQSLRFAASTRTYILRKNTDAL 206
HK+ +++IDL S HGTF+ + RL P ++ + ++ F ASTR Y LR+ L
Sbjct: 76 YHKHLKRVFLIDLNSTHGTFLGHIRLEPHKPQQIPIDSTVSFGASTRAYTLREKPQTL 133
>sp|Q9BWU0|NADAP_HUMAN Kanadaptin OS=Homo sapiens GN=SLC4A1AP PE=1 SV=1
Length = 796
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 66/125 (52%), Gaps = 15/125 (12%)
Query: 88 WQPPDWAIEPRSSVYYLDVLKDGEILDRINLDRRRH-IFGRQFQTCDFVLDHQSISRQHA 146
+Q P W P ++ Y L+ LK G IL +L + +FGR CD L+H S+SR HA
Sbjct: 154 YQEPPWG-GPATAPYSLETLKGGTILGTRSLKGTSYCLFGR-LSGCDVCLEHPSVSRYHA 211
Query: 147 AVIPHK----------NG-SIYVIDLGSAHGTFVANERLTKETPVELEVGQSLRFAASTR 195
V+ H+ NG Y+ DLGS HGTF+ R+ T + VG +RF STR
Sbjct: 212 -VLQHRASGPDGECDSNGPGFYLYDLGSTHGTFLNKTRIPPRTYCRVHVGHVVRFGGSTR 270
Query: 196 TYILR 200
+IL+
Sbjct: 271 LFILQ 275
>sp|P34648|YOT2_CAEEL Uncharacterized protein ZK632.2 OS=Caenorhabditis elegans
GN=ZK632.2 PE=4 SV=1
Length = 710
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 64/120 (53%), Gaps = 13/120 (10%)
Query: 88 WQPPDWAIEPR-SSVYYLDVLKDGEILDRINLDRRRH----IFGRQFQTCDFVLDHQSIS 142
++ P WA EP + + ++LK+G+++ +L R++ + GR CD +++H SIS
Sbjct: 68 YEVPPWACEPDPAHKFQFEILKEGKLIASYDLSNRKNSTFVVIGRIKPGCDLLMEHPSIS 127
Query: 143 RQHAAVIPHKNGSI-------YVIDLGSAHGTFVANERLTKETPVELEVGQSLRFAASTR 195
R H ++ + N + ++ +LGS HG+ + +RL + + VG +F STR
Sbjct: 128 RYHC-ILQYGNDKMSKTGKGWHIFELGSTHGSRMNKKRLPPKQYIRTRVGFIFQFGESTR 186
>sp|Q8TAD8|SNIP1_HUMAN Smad nuclear-interacting protein 1 OS=Homo sapiens GN=SNIP1 PE=1
SV=1
Length = 396
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 15/124 (12%)
Query: 89 QPPDWAIEPRSSVYYLDVLKDGEILDRINLDRRR-HIFGRQFQTCDFVLDHQSISRQHAA 147
+PP+ I + + L K+ E+L + + R+ ++ GR + D +DH S S+QHA
Sbjct: 248 EPPEARIPKKR--WRLYPFKNDEVLPVMYIHRQSAYLLGRHRRIADIPIDHPSCSKQHAV 305
Query: 148 V------IPHKNGSI------YVIDLGSAHGTFVANERLTKETPVELEVGQSLRFAASTR 195
+G++ Y+IDLGS +GTF+ N+R+ + EL+ L+F S+R
Sbjct: 306 FQYRLVEYTRADGTVGRRVKPYIIDLGSGNGTFLNNKRIEPQRYYELKEKDVLKFGFSSR 365
Query: 196 TYIL 199
Y+L
Sbjct: 366 EYVL 369
>sp|Q54VU4|Y8013_DICDI Probable serine/threonine-protein kinase DDB_G0280133
OS=Dictyostelium discoideum GN=DDB_G0280133 PE=3 SV=1
Length = 1505
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 58/126 (46%), Gaps = 15/126 (11%)
Query: 88 WQPPDWAIEPRSSVYYLDVLKDGEILDRINLDRRR-HIFGRQFQTCDFVLDHQSISRQHA 146
W P A P + + L K + LD I L R++ +FGR D +DH S S QHA
Sbjct: 1364 WHEPAEAKLP-TEKWMLYPFKGKDQLDTIYLHRKKSFLFGRNRDIADIPIDHPSCSSQHA 1422
Query: 147 AVIPH-------KNGSI------YVIDLGSAHGTFVANERLTKETPVELEVGQSLRFAAS 193
++ GSI Y+IDL S +GTF+ E++ EL + F S
Sbjct: 1423 VIVFRIRKKENPNTGSIKTFILPYIIDLESTNGTFLKGEKIEPAKYFELRPKDKITFGTS 1482
Query: 194 TRTYIL 199
TR YIL
Sbjct: 1483 TREYIL 1488
>sp|Q8BIZ6|SNIP1_MOUSE Smad nuclear-interacting protein 1 OS=Mus musculus GN=Snip1 PE=1
SV=1
Length = 383
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 15/124 (12%)
Query: 89 QPPDWAIEPRSSVYYLDVLKDGEILDRINLDRRR-HIFGRQFQTCDFVLDHQSISRQHAA 147
+PP+ I + + L K+ E+L + + R+ ++ GR + D +DH S S+QHA
Sbjct: 235 EPPEARIPKKR--WRLYPFKNDEVLPVMYIHRQSAYLLGRHRRIADIPIDHPSCSKQHAV 292
Query: 148 V------IPHKNGSI------YVIDLGSAHGTFVANERLTKETPVELEVGQSLRFAASTR 195
+G++ Y+IDLGS +GTF+ N+R+ + EL+ L+F S+R
Sbjct: 293 FQYRLVEYTRADGTVGRRVKPYIIDLGSGNGTFLNNKRIEPQRYYELKEKDVLKFGFSSR 352
Query: 196 TYIL 199
Y+L
Sbjct: 353 EYVL 356
>sp|Q5M9G6|SNIP1_RAT Smad nuclear interacting protein 1 OS=Rattus norvegicus GN=Snip1
PE=2 SV=1
Length = 389
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 15/124 (12%)
Query: 89 QPPDWAIEPRSSVYYLDVLKDGEILDRINLDRRR-HIFGRQFQTCDFVLDHQSISRQHAA 147
+PP+ I + + L K+ E+L + + R+ ++ GR + D +DH S S+QHA
Sbjct: 239 EPPEARIPKKR--WRLYPFKNDEVLPVMYIHRQSAYLLGRHRRIADIPIDHPSCSKQHAV 296
Query: 148 V------IPHKNGSI------YVIDLGSAHGTFVANERLTKETPVELEVGQSLRFAASTR 195
+G++ Y+IDLGS +GTF+ N+R+ + EL+ L+F S+R
Sbjct: 297 FQYRLVEYTRADGTVGRRVKPYIIDLGSGNGTFLNNKRIEPQRYYELKEKDVLKFGFSSR 356
Query: 196 TYIL 199
Y+L
Sbjct: 357 EYVL 360
>sp|Q8W4D8|DDL_ARATH FHA domain-containing protein DDL OS=Arabidopsis thaliana GN=DDL
PE=1 SV=1
Length = 314
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 17/151 (11%)
Query: 65 KQEASLSV-GK-AQQVTQIGGGQSTWQPPDWAIEPRSSVYYLDVLKDGEILDR-INLDRR 121
K+E S + GK A++ + G + P A +P S + L V KDGE L+ + L R+
Sbjct: 158 KEEPSFELSGKLAEETNRYRGITLLFNEPPEARKP-SERWRLYVFKDGEPLNEPLCLHRQ 216
Query: 122 R-HIFGRQFQTCDFVLDHQSISRQHAAV------------IPHKNGSIYVIDLGSAHGTF 168
++FGR+ + D DH S S+QHA + + K Y++DLGS + T+
Sbjct: 217 SCYLFGRERRIADIPTDHPSCSKQHAVIQYREMEKEKPDGMMGKQVKPYIMDLGSTNKTY 276
Query: 169 VANERLTKETPVELEVGQSLRFAASTRTYIL 199
+ + + EL +++F S+R Y+L
Sbjct: 277 INESPIEPQRYYELFEKDTIKFGNSSREYVL 307
>sp|A0JM08|C170B_XENTR Centrosomal protein of 170 kDa protein B OS=Xenopus tropicalis
GN=cep170b PE=2 SV=1
Length = 1628
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 115 RINLDRRRHIFGRQFQTCDFVLDHQSISRQHAAVIPHKNGSIY-VIDLGSAHGTFVANER 173
R L R GR+ C+ +L +S+ +QHA + + + V DLGS +GTFV + R
Sbjct: 15 RHRLPREMIFVGRE--DCELMLQSRSVDKQHAVINYDSDKDEHRVKDLGSLNGTFVNDVR 72
Query: 174 LTKETPVELEVGQSLRFAASTRTYILRK 201
+ + + L++ ++RF TY+L +
Sbjct: 73 IPDQKYITLKLSDNIRFGYDINTYVLEQ 100
>sp|Q9Y4F5|C170B_HUMAN Centrosomal protein of 170 kDa protein B OS=Homo sapiens GN=CEP170B
PE=1 SV=4
Length = 1589
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 122 RHIFGRQF-----QTCDFVLDHQSISRQHAAV-IPHKNGSIYVIDLGSAHGTFVANERLT 175
RH R+ + C+ +L +S+ +QHA + +V DLGS +GTFV + R+
Sbjct: 15 RHRLPRELIFVGREECELMLQSRSVDKQHAVINYDQDRDEHWVKDLGSLNGTFVNDMRIP 74
Query: 176 KETPVELEVGQSLRFAASTRTYILRK 201
+ V L++ +RF + Y+L +
Sbjct: 75 DQKYVTLKLNDVIRFGYDSNMYVLER 100
>sp|Q498L0|C170B_XENLA Centrosomal protein of 170 kDa protein B OS=Xenopus laevis
GN=cep170b PE=2 SV=1
Length = 1610
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 115 RINLDRRRHIFGRQFQTCDFVLDHQSISRQHAAVIPHKNGSIY-VIDLGSAHGTFVANER 173
R L R GR+ C+ +L +S+ +QHA + + + V DLGS +GTF+ + R
Sbjct: 15 RHRLPREMIFVGRE--DCELMLRSRSVDKQHAVINYDSDKDEHRVKDLGSLNGTFINDVR 72
Query: 174 LTKETPVELEVGQSLRFAASTRTYILRK 201
+ + + L++ ++RF TY+L +
Sbjct: 73 IPDQKYITLKLNDNIRFGYDINTYVLEQ 100
>sp|Q80U49|C170B_MOUSE Centrosomal protein of 170 kDa protein B OS=Mus musculus GN=Cep170b
PE=1 SV=2
Length = 1574
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 122 RHIFGRQF-----QTCDFVLDHQSISRQHAAV-IPHKNGSIYVIDLGSAHGTFVANERLT 175
RH R+ C+ +L +S+ +QHA + +V DLGS +GTFV + R+
Sbjct: 15 RHRLPRELIFVGRDECELMLQSRSVDKQHAVINYDQDRDEHWVKDLGSLNGTFVNDVRIP 74
Query: 176 KETPVELEVGQSLRFAASTRTYILRK 201
+ + L++ +RF + Y+L +
Sbjct: 75 DQKYITLKLNDVIRFGYDSNMYVLER 100
>sp|Q5SW79|CE170_HUMAN Centrosomal protein of 170 kDa OS=Homo sapiens GN=CEP170 PE=1 SV=1
Length = 1584
Score = 45.4 bits (106), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 115 RINLDRRRHIFGRQFQTCDFVLDHQSISRQHAAVIPHKNGSIYVI-DLGSAHGTFVANER 173
R L R GR C+ +L +S+ +QHA + + +++ DLGS +GTFV + R
Sbjct: 15 RHRLPREMIFVGRD--DCELMLQSRSVDKQHAVINYDASTDEHLVKDLGSLNGTFVNDVR 72
Query: 174 LTKETPVELEVGQSLRFAASTRTYIL 199
+ ++T + L++ LRF T + +
Sbjct: 73 IPEQTYITLKLEDKLRFGYDTNLFTV 98
>sp|Q6A065|CE170_MOUSE Centrosomal protein of 170 kDa OS=Mus musculus GN=Cep170 PE=1 SV=2
Length = 1588
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 115 RINLDRRRHIFGRQFQTCDFVLDHQSISRQHAAVIPHKNGSIYVI-DLGSAHGTFVANER 173
R L R GR C+ +L +S+ +QHA + + +++ DLGS +GTFV + R
Sbjct: 15 RHRLPREMIFVGRD--DCELMLQSRSVDKQHAVINYDASMDEHLVKDLGSLNGTFVNDVR 72
Query: 174 LTKETPVELEVGQSLRFAASTRTYIL 199
+ ++T + L++ LRF T + +
Sbjct: 73 IPEQTYITLKLEDKLRFGYDTNLFTV 98
>sp|Q28623|SLMAP_RABIT Sarcolemmal membrane-associated protein OS=Oryctolagus cuniculus
GN=SLMAP PE=1 SV=2
Length = 771
Score = 40.8 bits (94), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 17/86 (19%)
Query: 122 RHIF-------GRQFQTC-----DFVLDHQSISRQHAAV-IPHKNGSIYVIDLGSAHGTF 168
RH++ GR C + D + +SR HA V HK G Y+ D S++GTF
Sbjct: 20 RHVYLDEPIKIGRSVARCRPAQNNATFDCKVLSRNHALVWFDHKTGKFYLQDTKSSNGTF 79
Query: 169 VANERLTKET----PVELEVGQSLRF 190
+ ++RL++ + P E+ G ++F
Sbjct: 80 INSQRLSRGSEESPPCEILSGDIIQF 105
>sp|Q14BN4|SLMAP_HUMAN Sarcolemmal membrane-associated protein OS=Homo sapiens GN=SLMAP
PE=1 SV=1
Length = 828
Score = 40.8 bits (94), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 17/86 (19%)
Query: 122 RHIF-------GRQFQTC-----DFVLDHQSISRQHAAV-IPHKNGSIYVIDLGSAHGTF 168
RH++ GR C + D + +SR HA V HK G Y+ D S++GTF
Sbjct: 20 RHVYLDEPIKIGRSVARCRPAQNNATFDCKVLSRNHALVWFDHKTGKFYLQDTKSSNGTF 79
Query: 169 VANERLTKET----PVELEVGQSLRF 190
+ ++RL++ + P E+ G ++F
Sbjct: 80 INSQRLSRGSEESPPCEILSGDIIQF 105
>sp|Q03944|VPS64_YEAST Vacuolar protein sorting-associated protein 64 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPS64 PE=1
SV=1
Length = 604
Score = 40.4 bits (93), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 121 RRHIFGRQFQTCDFVLDHQSISRQHAAV-IPHKNGSIYVIDLGSAHGTFVANERLTKETP 179
+R +F +Q + + D + +SR HA + +G IY+ DL S++GTFV ++ ++
Sbjct: 203 KRDLFSQQVRPDNGNFDSRVLSRNHACLSCDPTSGKIYIRDLKSSNGTFVNGVKI-RQND 261
Query: 180 VELEVGQSL 188
VEL+VG ++
Sbjct: 262 VELKVGDTV 270
>sp|Q6NHD4|ODHI_CORDI Oxoglutarate dehydrogenase inhibitor OS=Corynebacterium diphtheriae
(strain ATCC 700971 / NCTC 13129 / Biotype gravis)
GN=odhI PE=3 SV=1
Length = 143
Score = 39.3 bits (90), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 66 QEASLSVGKAQQVTQI--GGGQSTWQPPDWAIEPRSSVYYLDVLKDGEILDRINLDRRRH 123
Q + SV +A + ++ G G +T D + P + L V + R LDR
Sbjct: 11 QVETTSVFRADLLKEMESGAGAATASGSD--VTPPAGAGMLVVKRGPNAGARFLLDRPTT 68
Query: 124 IFGRQFQTCDFVLDHQSISRQHAAVIPHKNGSIYVIDLGSAHGTFVANE 172
GR ++ D LD ++SR+HA ++GS V+D+GS +GT+V E
Sbjct: 69 TAGRHPES-DIFLDDVTVSRRHAE-FRRQDGSFEVVDVGSLNGTYVNRE 115
>sp|P0C219|SLMAP_RAT Sarcolemmal membrane-associated protein OS=Rattus norvegicus
GN=Slmap PE=2 SV=1
Length = 858
Score = 38.9 bits (89), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 17/86 (19%)
Query: 122 RHIF-------GRQFQTC-----DFVLDHQSISRQHAAV-IPHKNGSIYVIDLGSAHGTF 168
RH++ GR C + D + +SR HA V HK Y+ D S++GTF
Sbjct: 20 RHVYLDEPIKIGRSVARCRPAQNNATFDCKVLSRNHALVWFDHKTSKFYLQDTKSSNGTF 79
Query: 169 VANERLTKET----PVELEVGQSLRF 190
+ ++RL++ + P E+ G ++F
Sbjct: 80 INSQRLSRGSEESPPCEILSGDIIQF 105
>sp|Q3URD3|SLMAP_MOUSE Sarcolemmal membrane-associated protein OS=Mus musculus GN=Slmap
PE=1 SV=2
Length = 845
Score = 38.5 bits (88), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 17/86 (19%)
Query: 122 RHIF-------GRQFQTC-----DFVLDHQSISRQHAAV-IPHKNGSIYVIDLGSAHGTF 168
RH++ GR C + D + +SR HA V HK Y+ D S++GTF
Sbjct: 20 RHVYLDEPIKIGRSVARCRPAQNNATFDCKVLSRNHALVWFDHKTSKFYLQDTKSSNGTF 79
Query: 169 VANERLTKET----PVELEVGQSLRF 190
+ ++RL++ + P E+ G ++F
Sbjct: 80 INSQRLSRGSEESPPCEILSGDIIQF 105
>sp|Q008X6|R1AB_WBV24 Replicase polyprotein 1ab OS=White bream virus (isolate Blicca
bjoerkna L./Germany/DF24/00) GN=rep PE=1 SV=1
Length = 6872
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 141 ISRQHAAVIPHKNGSIYVIDLGSAHGTFVANERLTKETPVELEVGQSLRFAASTRTYILR 200
+ +++ A IP +NG+I + D G+AH +VA + L K PV Q RF Y++R
Sbjct: 4594 VFKKNTASIPSENGTIMLKDTGTAHEIYVAKQLLAKGLPVL----QHARFNHDGTDYLIR 4649
Query: 201 KNT 203
T
Sbjct: 4650 YYT 4652
>sp|Q9FGC7|ZEP_ARATH Zeaxanthin epoxidase, chloroplastic OS=Arabidopsis thaliana GN=ZEP
PE=1 SV=1
Length = 667
Score = 37.7 bits (86), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 129 FQTCDFVLDHQSISRQHAAVIPHKNGSIYVIDLGSAHGTFVANE-----RLTKETPVELE 183
F V+ +S+ HA VI +K+G+ +++DL S HGT+V + R T P
Sbjct: 568 FPGMRIVIPSSQVSKMHARVI-YKDGAFFLMDLRSEHGTYVTDNEGRRYRATPNFPARFR 626
Query: 184 VGQSLRFA----ASTRTYILRKN 202
+ F A+ R ++RK
Sbjct: 627 SSDIIEFGSDKKAAFRVKVIRKT 649
>sp|P66799|EMBR_MYCTU Transcriptional regulatory protein EmbR OS=Mycobacterium
tuberculosis GN=embR PE=1 SV=1
Length = 388
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 133 DFVLDHQSISRQHAAVIPHKNGSIYVI-DLGSAHGTFVANERLTKETPVELEVGQSLRFA 191
D VLD ++SR HA ++ G+ YVI DL S++G V +ER+ + V L G +R
Sbjct: 317 DIVLDSANVSRHHAVIV--DTGTNYVINDLRSSNGVHVQHERI--RSAVTLNDGDHIRIC 372
Query: 192 ASTRTYILRKNT 203
T+ + T
Sbjct: 373 DHEFTFQISAGT 384
>sp|P66800|EMBR_MYCBO Transcriptional regulatory protein EmbR OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=embR PE=3 SV=1
Length = 388
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 133 DFVLDHQSISRQHAAVIPHKNGSIYVI-DLGSAHGTFVANERLTKETPVELEVGQSLRFA 191
D VLD ++SR HA ++ G+ YVI DL S++G V +ER+ + V L G +R
Sbjct: 317 DIVLDSANVSRHHAVIV--DTGTNYVINDLRSSNGVHVQHERI--RSAVTLNDGDHIRIC 372
Query: 192 ASTRTYILRKNT 203
T+ + T
Sbjct: 373 DHEFTFQISAGT 384
>sp|Q06001|FAR10_YEAST Factor arrest protein 10 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=FAR10 PE=1 SV=1
Length = 478
Score = 36.2 bits (82), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 136 LDHQSISRQHAAV-IPHKNGSIYVIDLGSAHGTFVANERLTKETPVELEVGQSLRFAAST 194
D + +SR HA + G +Y+ DL S++GTF+ +R+ VE++VG +
Sbjct: 137 FDSRVLSRNHALLSCDPLTGKVYIRDLKSSNGTFINGQRIG-SNDVEIKVGDVIDLGTDI 195
Query: 195 RTYILRKNTDA----LFARP 210
T I + A LF +P
Sbjct: 196 DTKIEHRKISATVEELFVQP 215
>sp|Q5I2W8|NBN_DANRE Nibrin OS=Danio rerio GN=nbn PE=2 SV=2
Length = 818
Score = 35.8 bits (81), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 15/110 (13%)
Query: 93 WAIEPRSSVYYLDVLKDGEILDRINLDRRRHIFGRQFQTCDFVL-DHQSISRQHAAVIPH 151
W ++P S GE + I L + ++ GR+ C+ +L + QSISR HA V+
Sbjct: 2 WKLQPTES--------GGESV--ILLAGQEYVVGRK--NCEILLTNDQSISRVHA-VLTV 48
Query: 152 KNGSIYVIDLGSAHGTFVANERLTKETPVELEVGQSLRFAASTRTYILRK 201
++ + D S +GTFV E+L + L+ G + F + L K
Sbjct: 49 TEQAVTLKD-SSKYGTFVNGEKLESGSTKTLQTGYKITFGVFQSKFSLEK 97
>sp|O74388|YNVD_SCHPO Uncharacterized protein C3H7.13 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC3H7.13 PE=1 SV=1
Length = 301
Score = 35.4 bits (80), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 133 DFVLDHQSISRQHAAVIPHKNG-SIYVIDLGSAHGTFVANERLTKE----TPVELEVGQS 187
+ + + +SRQHA + K+ S+Y+ D+ S++GTFV RL+ E P +L G
Sbjct: 43 NLFFNSKVLSRQHAELWLDKDTLSVYIRDVKSSNGTFVNETRLSPENKPSAPCKLNSGDI 102
Query: 188 LRF 190
+ F
Sbjct: 103 VDF 105
>sp|B1AJZ9|FHAD1_HUMAN Forkhead-associated domain-containing protein 1 OS=Homo sapiens
GN=FHAD1 PE=2 SV=2
Length = 1412
Score = 35.4 bits (80), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Query: 125 FGRQFQTCDFVLDHQSISRQHAAVIPHKNGSIYVI-DLGSAHGTFVANERLTKETPVELE 183
GR + D VL I HA + ++ +V+ D S +GTFV NE + V+L
Sbjct: 20 IGR-HENSDLVLQSPDIDNHHALIEYNEAECSFVLQDFNSRNGTFV-NECHIQNVAVKLI 77
Query: 184 VGQSLRFAASTRTYILRKNTDALFARPPPAT 214
G LRF ++ TY L + PPP +
Sbjct: 78 PGDILRFGSAGLTYEL------VIENPPPVS 102
>sp|Q10322|DMA1_SCHPO Probable E3 ubiquitin-protein ligase dma1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=dma1 PE=1 SV=1
Length = 267
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 135 VLDHQSISRQHAAVIPHKNGSIYVIDLGSAHGTFVANERLT 175
V + +SR+HA + ++N + Y+ D+GS+ GTF+ + RL+
Sbjct: 78 VFRSKVVSRRHAQIF-YENNTWYIQDMGSSSGTFLNHVRLS 117
>sp|Q4JVU0|ODHI_CORJK Oxoglutarate dehydrogenase inhibitor OS=Corynebacterium jeikeium
(strain K411) GN=odhI PE=3 SV=1
Length = 144
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 115 RINLDRRRHIFGRQFQTCDFVLDHQSISRQHAAVIPHKNGSIY-VIDLGSAHGTFVANE 172
R LD+ GR D LD ++SR+HA +NG Y V+D+GS +GT+V E
Sbjct: 60 RFLLDQETTAAGRH-PDSDIFLDDVTVSRRHAEF--RRNGDQYEVVDVGSLNGTYVNRE 115
>sp|A6PWD2|FHAD1_MOUSE Forkhead-associated domain-containing protein 1 OS=Mus musculus
GN=Fhad1 PE=2 SV=1
Length = 1420
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 133 DFVLDHQSISRQHAAV-IPHKNGSIYVIDLGSAHGTFVANERLTKETPVELEVGQSLRFA 191
D VL I HA + G+ + D S +GTFV NE + V+L G LRF
Sbjct: 27 DLVLQSADIDNHHALIEFNEAEGTFVLQDFNSRNGTFV-NECHIQNVAVKLIPGDILRFG 85
Query: 192 ASTRTYIL 199
++ TY L
Sbjct: 86 SAGMTYEL 93
>sp|P32348|TBG_USTVI Tubulin gamma chain OS=Ustilago violacea GN=TUB4 PE=3 SV=1
Length = 469
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 339 EENFLPKGVTDKLQ-EVLNKVKSGPKSRIY--DDLYGDSFSGKVGSSWAYSSVSSTRPAS 395
+E+++P+ V L+ VL+ +KSGP +Y ++ + D G G++WA + R
Sbjct: 57 DEHYIPRAVMIDLEPRVLDSIKSGPYKNLYNPENFFYDPQGGGAGNNWAKGYAAGERV-- 114
Query: 396 PPEDAEGKTISMSREKPGNNSL 417
E + RE G++SL
Sbjct: 115 ----YEEVMEMIDREAEGSDSL 132
>sp|Q8NQJ3|ODHI_CORGL Oxoglutarate dehydrogenase inhibitor OS=Corynebacterium glutamicum
(strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 /
NCIMB 10025) GN=odhI PE=1 SV=1
Length = 143
Score = 33.5 bits (75), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 115 RINLDRRRHIFGRQFQTCDFVLDHQSISRQHAAVIPHKNGSIYVIDLGSAHGTFVANE 172
R LD+ GR ++ D LD ++SR+HA ++ G V+D+GS +GT+V E
Sbjct: 60 RFLLDQPTTTAGRHPES-DIFLDDVTVSRRHAEFRINE-GEFEVVDVGSLNGTYVNRE 115
>sp|Q8FTJ5|ODHI_COREF Oxoglutarate dehydrogenase inhibitor OS=Corynebacterium efficiens
(strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC
100395) GN=odhI PE=3 SV=1
Length = 142
Score = 33.1 bits (74), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 115 RINLDRRRHIFGRQFQTCDFVLDHQSISRQHAAVIPHKNGSIYVIDLGSAHGTFVANE 172
R LD+ GR ++ D LD ++SR+HA ++ G V+D+GS +GT+V E
Sbjct: 59 RFLLDQPTTTAGRHPES-DIFLDDVTVSRRHAEFRINE-GEFEVVDVGSLNGTYVNRE 114
>sp|Q5MZJ6|RLMN_SYNP6 Probable dual-specificity RNA methyltransferase RlmN
OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 /
SAUG 1402/1) GN=rlmN PE=3 SV=1
Length = 351
Score = 33.1 bits (74), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 46 SYQQQPQYQNQHQISQNSIKQEASLSVGKAQQVTQIGGGQSTWQPPDWAIEPRSSVYYLD 105
SY+ + YQ ++ S +++ + + Q + + G+S Q D ++ P S+ YL
Sbjct: 26 SYRAKQLYQWLYERSIHNLAEISVFPKAWRQSLQAVPVGRS--QIVDRSVSPSGSIKYLL 83
Query: 106 VLKDGEILDRINL---DRRRHIFGRQF---QTCDFVLDHQSISRQHAAVIPHK 152
L DGEI++ + + DR Q CDF + R+H A PH+
Sbjct: 84 RLHDGEIIEAVGIPSGDRLTVCVSSQLGCAMACDFCATGKGGFRRHLA--PHE 134
>sp|Q8XJR3|DPO3_CLOPE DNA polymerase III PolC-type OS=Clostridium perfringens (strain 13 /
Type A) GN=polC PE=3 SV=1
Length = 1449
Score = 32.3 bits (72), Expect = 7.1, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Query: 218 LPPPPDPSDEEAVVVYNTLINRYGLSKSDLICRSGEPSRSSIGRDDGQQPERAAKRIKKL 277
L P P ++ V+ T + G++K +L C G S G PE K ++++
Sbjct: 1121 LDPKTIPLNDPKVISLFTSPDALGVTKEELGCEVG-----SYGL-----PEFGTKFVRQM 1170
Query: 278 RVSFRDQAGGELVEVVGISDGADVGTEPGPIGMKEG 313
V + ++ +LV + G+S G DV +KEG
Sbjct: 1171 LVDTQPKSFADLVRISGLSHGTDVWLNNAQYFIKEG 1206
>sp|Q31MD1|RLMN_SYNE7 Probable dual-specificity RNA methyltransferase RlmN
OS=Synechococcus elongatus (strain PCC 7942) GN=rlmN
PE=3 SV=1
Length = 361
Score = 32.0 bits (71), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 46 SYQQQPQYQNQHQISQNSIKQEASLSVGKAQQVTQIGGGQSTWQPPDWAIEPRSSVYYLD 105
SY+ + YQ ++ S +++ + + Q + + G+S Q D ++ P ++ YL
Sbjct: 36 SYRAKQLYQWLYERSIHNLAEISVFPKAWRQSLQAVPVGRS--QIVDRSVSPSGTIKYLL 93
Query: 106 VLKDGEILDRINL---DRRRHIFGRQF---QTCDFVLDHQSISRQHAAVIPHK 152
L DGEI++ + + DR Q CDF + R+H A PH+
Sbjct: 94 RLHDGEIIEAVGIPSGDRLTVCVSSQLGCAMACDFCATGKGGFRRHLA--PHE 144
>sp|A0QYG2|GARA_MYCS2 Glycogen accumulation regulator GarA OS=Mycobacterium smegmatis
(strain ATCC 700084 / mc(2)155) GN=garA PE=1 SV=2
Length = 158
Score = 32.0 bits (71), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 132 CDFVLDHQSISRQHAAVIPHKNGSIYVIDLGSAHGTFVANE 172
D LD ++SR+HA + G V+D+GS +GT+V E
Sbjct: 84 SDIFLDDVTVSRRHAE-FRLEGGEFQVVDVGSLNGTYVNRE 123
>sp|Q0JCU7|ZEP_ORYSJ Zeaxanthin epoxidase, chloroplastic OS=Oryza sativa subsp. japonica
GN=ZEP PE=2 SV=1
Length = 659
Score = 32.0 bits (71), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Query: 131 TCDFVLDHQSISRQHAAVIPHKNGSIYVIDLGSAHGTFVANE-----RLTKETPVELEVG 185
T L IS HA I KN + YV D GS HGT++ + R+ PV
Sbjct: 565 TASLALPLPQISENHA-TITCKNKAFYVTDNGSEHGTWITDNEGRRYRVPPNFPVRFHPS 623
Query: 186 QSLRFAASTR 195
++ F + +
Sbjct: 624 DAIEFGSDKK 633
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.130 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 167,715,684
Number of Sequences: 539616
Number of extensions: 7433874
Number of successful extensions: 22495
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 22348
Number of HSP's gapped (non-prelim): 163
length of query: 429
length of database: 191,569,459
effective HSP length: 120
effective length of query: 309
effective length of database: 126,815,539
effective search space: 39186001551
effective search space used: 39186001551
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)