Query 014195
Match_columns 429
No_of_seqs 327 out of 2333
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 07:11:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014195.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014195hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 100.0 7.4E-50 2.5E-54 375.4 31.9 288 25-392 16-307 (308)
2 2xn4_A Kelch-like protein 2; s 100.0 1.8E-49 6.2E-54 371.6 33.1 269 92-397 32-302 (302)
3 3ii7_A Kelch-like protein 7; p 100.0 2.7E-48 9.4E-53 364.3 30.2 264 93-395 27-295 (306)
4 2vpj_A Kelch-like protein 12; 100.0 5.9E-48 2E-52 361.1 31.9 283 32-394 13-300 (301)
5 4asc_A Kelch repeat and BTB do 100.0 2.3E-47 8E-52 359.5 27.1 277 95-402 18-305 (315)
6 1zgk_A Kelch-like ECH-associat 100.0 4.2E-46 1.5E-50 349.8 29.1 274 107-427 10-287 (308)
7 2woz_A Kelch repeat and BTB do 100.0 7.8E-46 2.7E-50 349.5 25.0 277 94-402 28-315 (318)
8 2uvk_A YJHT; unknown function, 100.0 4.4E-45 1.5E-49 350.0 28.9 294 104-427 2-342 (357)
9 2xn4_A Kelch-like protein 2; s 100.0 1.8E-44 6.2E-49 337.6 30.3 264 117-426 11-275 (302)
10 2vpj_A Kelch-like protein 12; 100.0 4.9E-44 1.7E-48 334.5 30.8 263 119-427 12-278 (301)
11 3ii7_A Kelch-like protein 7; p 100.0 8.1E-44 2.8E-48 333.9 29.7 260 121-427 11-272 (306)
12 2uvk_A YJHT; unknown function, 100.0 1.2E-43 4.1E-48 340.0 24.9 303 26-384 12-354 (357)
13 4asc_A Kelch repeat and BTB do 100.0 5.7E-43 2E-47 329.5 26.3 265 121-427 4-277 (315)
14 2woz_A Kelch repeat and BTB do 100.0 5.7E-42 2E-46 323.1 27.9 276 110-427 7-287 (318)
15 2zwa_A Leucine carboxyl methyl 100.0 2.7E-38 9.3E-43 326.9 25.3 285 101-426 378-693 (695)
16 1k3i_A Galactose oxidase precu 100.0 8.5E-39 2.9E-43 330.1 12.8 287 91-405 220-532 (656)
17 2zwa_A Leucine carboxyl methyl 100.0 1.7E-36 5.8E-41 313.4 21.0 269 28-372 392-694 (695)
18 1k3i_A Galactose oxidase precu 100.0 1.4E-34 4.7E-39 298.7 20.7 281 91-405 167-477 (656)
19 3q7m_A Lipoprotein YFGL, BAMB; 98.4 0.00079 2.7E-08 63.5 30.1 289 29-401 49-366 (376)
20 3q7m_A Lipoprotein YFGL, BAMB; 97.9 0.011 3.7E-07 55.6 26.9 235 90-401 63-325 (376)
21 3dsm_A Uncharacterized protein 97.8 0.0034 1.2E-07 58.1 21.7 253 89-401 16-285 (328)
22 2ovr_B FBW7, F-BOX/WD repeat p 97.6 0.0084 2.9E-07 57.7 22.0 263 33-376 128-395 (445)
23 3dsm_A Uncharacterized protein 97.5 0.043 1.5E-06 50.5 23.3 214 137-402 16-244 (328)
24 3mbr_X Glutamine cyclotransfer 97.4 0.013 4.5E-07 51.4 18.1 167 155-377 14-184 (243)
25 3mbr_X Glutamine cyclotransfer 97.4 0.015 5.1E-07 51.0 18.3 112 102-229 9-122 (243)
26 3vgz_A Uncharacterized protein 97.4 0.033 1.1E-06 51.2 21.8 101 89-204 68-178 (353)
27 1l0q_A Surface layer protein; 97.3 0.0018 6E-08 61.1 12.3 169 34-231 2-179 (391)
28 1ri6_A Putative isomerase YBHE 97.3 0.0075 2.6E-07 55.2 15.5 99 90-204 60-166 (343)
29 3v7d_B Cell division control p 97.3 0.089 3.1E-06 50.6 23.8 172 171-402 279-451 (464)
30 3jrp_A Fusion protein of prote 97.2 0.0099 3.4E-07 55.2 16.3 236 91-383 34-299 (379)
31 1k8k_C P40, ARP2/3 complex 41 97.2 0.014 4.8E-07 54.2 17.3 105 121-245 19-126 (372)
32 3nol_A Glutamine cyclotransfer 97.2 0.0087 3E-07 53.0 14.6 159 164-378 45-207 (262)
33 1l0q_A Surface layer protein; 97.1 0.0039 1.3E-07 58.7 11.9 97 122-243 44-144 (391)
34 1p22_A F-BOX/WD-repeat protein 97.1 0.0081 2.8E-07 57.7 14.4 212 33-286 142-356 (435)
35 3jrp_A Fusion protein of prote 97.0 0.025 8.6E-07 52.4 16.1 104 121-244 22-132 (379)
36 3bws_A Protein LP49; two-domai 96.9 0.026 8.9E-07 53.7 16.3 99 90-205 144-249 (433)
37 2xbg_A YCF48-like protein; pho 96.9 0.21 7.3E-06 45.8 21.8 238 96-402 21-268 (327)
38 3nol_A Glutamine cyclotransfer 96.9 0.11 3.9E-06 45.8 18.5 113 101-229 30-144 (262)
39 4ery_A WD repeat-containing pr 96.9 0.073 2.5E-06 48.1 18.0 99 121-243 76-177 (312)
40 1p22_A F-BOX/WD-repeat protein 96.8 0.021 7.3E-07 54.7 14.7 218 117-405 138-356 (435)
41 2xbg_A YCF48-like protein; pho 96.8 0.32 1.1E-05 44.6 22.7 239 97-402 63-311 (327)
42 3ow8_A WD repeat-containing pr 96.7 0.06 2E-06 49.3 16.5 100 121-244 133-235 (321)
43 2iwa_A Glutamine cyclotransfer 96.7 0.1 3.4E-06 46.5 17.2 159 164-377 23-186 (266)
44 2ovr_B FBW7, F-BOX/WD repeat p 96.7 0.15 5.1E-06 48.8 19.9 242 90-405 139-382 (445)
45 2z2n_A Virginiamycin B lyase; 96.7 0.29 1E-05 43.4 20.9 170 33-229 25-201 (299)
46 1got_B GT-beta; complex (GTP-b 96.7 0.079 2.7E-06 48.8 16.9 102 121-244 108-213 (340)
47 3dwl_C Actin-related protein 2 96.7 0.01 3.5E-07 55.5 10.9 104 121-244 22-129 (377)
48 1rwi_B Serine/threonine-protei 96.6 0.2 6.7E-06 44.0 18.6 90 121-229 34-126 (270)
49 3vgz_A Uncharacterized protein 96.6 0.42 1.4E-05 43.6 22.0 73 121-203 52-124 (353)
50 2ojh_A Uncharacterized protein 96.6 0.023 8E-07 50.4 12.3 241 88-380 20-266 (297)
51 3jro_A Fusion protein of prote 96.6 0.023 7.8E-07 59.0 13.6 96 90-200 31-133 (753)
52 1k8k_C P40, ARP2/3 complex 41 96.5 0.086 2.9E-06 48.7 15.8 134 90-243 30-170 (372)
53 3dwl_C Actin-related protein 2 96.4 0.065 2.2E-06 49.8 14.8 135 90-244 33-175 (377)
54 3ow8_A WD repeat-containing pr 96.4 0.086 2.9E-06 48.2 15.1 95 122-231 48-143 (321)
55 3hfq_A Uncharacterized protein 96.4 0.058 2E-06 49.7 14.0 61 139-207 19-80 (347)
56 4ery_A WD repeat-containing pr 96.4 0.29 9.8E-06 44.1 18.5 99 121-243 34-135 (312)
57 1qhu_A Protein (hemopexin); be 96.4 0.58 2E-05 45.0 21.0 133 121-284 158-322 (460)
58 3v7d_B Cell division control p 96.3 0.27 9.2E-06 47.1 19.0 132 120-283 278-410 (464)
59 1gxr_A ESG1, transducin-like e 96.3 0.048 1.6E-06 49.5 12.7 214 121-404 108-327 (337)
60 3zwl_B Eukaryotic translation 96.3 0.086 3E-06 48.4 14.5 106 121-245 43-150 (369)
61 3jro_A Fusion protein of prote 96.2 0.027 9.2E-07 58.5 11.9 104 121-244 20-130 (753)
62 4aez_A CDC20, WD repeat-contai 96.2 0.14 4.6E-06 48.4 15.9 92 90-201 156-250 (401)
63 2pm9_A Protein WEB1, protein t 96.2 0.38 1.3E-05 45.0 19.0 106 122-244 126-247 (416)
64 1got_B GT-beta; complex (GTP-b 96.2 0.046 1.6E-06 50.4 12.2 99 121-244 154-255 (340)
65 3nok_A Glutaminyl cyclase; bet 96.1 0.22 7.4E-06 44.1 15.3 156 163-377 56-215 (268)
66 3hfq_A Uncharacterized protein 96.1 0.29 9.8E-06 44.9 17.3 102 90-205 63-178 (347)
67 3bws_A Protein LP49; two-domai 96.1 0.17 5.7E-06 48.0 16.0 90 139-243 102-197 (433)
68 1r5m_A SIR4-interacting protei 96.1 0.14 4.8E-06 48.0 15.3 65 120-201 215-280 (425)
69 1rwi_B Serine/threonine-protei 96.0 0.4 1.4E-05 41.9 17.1 172 33-229 34-210 (270)
70 2iwa_A Glutamine cyclotransfer 96.0 0.21 7.3E-06 44.4 14.9 112 102-229 9-124 (266)
71 3v9f_A Two-component system se 96.0 0.38 1.3E-05 50.0 19.1 198 139-403 428-646 (781)
72 3vl1_A 26S proteasome regulato 95.9 0.52 1.8E-05 44.2 18.6 64 121-201 108-172 (420)
73 2hes_X YDR267CP; beta-propelle 95.9 0.2 6.8E-06 45.9 15.1 225 121-404 69-318 (330)
74 2qc5_A Streptogramin B lactona 95.9 0.82 2.8E-05 40.4 22.3 171 33-229 30-206 (300)
75 2z2n_A Virginiamycin B lyase; 95.9 0.86 2.9E-05 40.2 21.8 120 90-228 36-158 (299)
76 3odt_A Protein DOA1; ubiquitin 95.9 0.16 5.6E-06 45.3 14.1 24 32-60 27-50 (313)
77 2hqs_A Protein TOLB; TOLB, PAL 95.8 0.47 1.6E-05 45.0 17.7 201 121-379 189-394 (415)
78 2pm7_B Protein transport prote 95.8 0.69 2.4E-05 41.4 18.0 64 122-200 67-133 (297)
79 3fm0_A Protein CIAO1; WDR39,SG 95.8 0.096 3.3E-06 48.4 12.4 105 121-244 27-134 (345)
80 1r5m_A SIR4-interacting protei 95.8 0.6 2.1E-05 43.6 18.3 66 121-204 119-185 (425)
81 2pbi_B Guanine nucleotide-bind 95.7 0.33 1.1E-05 44.9 15.8 52 339-404 294-347 (354)
82 1sq9_A Antiviral protein SKI8; 95.6 0.31 1.1E-05 45.4 15.4 106 120-245 24-156 (397)
83 4aez_A CDC20, WD repeat-contai 95.6 0.47 1.6E-05 44.5 16.7 132 89-244 112-246 (401)
84 1gxr_A ESG1, transducin-like e 95.6 0.23 7.8E-06 44.8 14.0 103 121-243 62-169 (337)
85 2pm9_A Protein WEB1, protein t 95.6 1.1 3.9E-05 41.7 19.3 105 122-243 178-291 (416)
86 2hes_X YDR267CP; beta-propelle 95.5 0.32 1.1E-05 44.5 14.7 104 121-244 24-136 (330)
87 4e54_B DNA damage-binding prot 95.5 0.38 1.3E-05 45.9 15.8 145 33-201 131-284 (435)
88 2pm7_B Protein transport prote 95.5 0.73 2.5E-05 41.2 16.9 104 121-244 20-130 (297)
89 2z3z_A Dipeptidyl aminopeptida 95.4 1.3 4.5E-05 45.0 20.3 192 137-374 234-437 (706)
90 4g56_B MGC81050 protein; prote 95.4 0.21 7E-06 46.4 13.1 68 121-203 105-174 (357)
91 3scy_A Hypothetical bacterial 95.3 1.2 4E-05 41.0 18.1 98 92-200 31-130 (361)
92 4gqb_B Methylosome protein 50; 95.3 0.23 7.8E-06 46.0 13.1 103 121-244 92-199 (344)
93 4gga_A P55CDC, cell division c 95.3 0.75 2.6E-05 43.5 17.1 95 89-201 124-220 (420)
94 4a2l_A BT_4663, two-component 95.3 1.6 5.4E-05 45.3 20.8 196 140-403 429-649 (795)
95 4aow_A Guanine nucleotide-bind 95.3 0.12 4E-06 47.1 10.8 47 190-243 195-243 (340)
96 2ynn_A Coatomer subunit beta'; 95.2 0.36 1.2E-05 43.5 13.7 101 121-244 24-126 (304)
97 3u4y_A Uncharacterized protein 95.2 0.3 1E-05 44.3 13.3 130 33-179 9-147 (331)
98 3bg1_A Protein SEC13 homolog; 95.1 0.3 1E-05 44.3 13.2 68 122-204 71-142 (316)
99 3mkq_A Coatomer beta'-subunit; 95.1 0.27 9.2E-06 50.9 14.3 101 121-244 24-126 (814)
100 2ojh_A Uncharacterized protein 95.1 0.91 3.1E-05 39.7 16.0 187 137-380 21-214 (297)
101 3vl1_A 26S proteasome regulato 95.0 2.2 7.7E-05 39.7 21.9 26 33-63 108-134 (420)
102 3odt_A Protein DOA1; ubiquitin 95.0 1.3 4.3E-05 39.3 17.0 15 364-378 247-261 (313)
103 1q7f_A NHL, brain tumor CG1071 95.0 1.7 5.9E-05 38.2 20.8 220 121-401 40-268 (286)
104 1pgu_A Actin interacting prote 95.0 0.5 1.7E-05 46.8 15.4 101 121-243 127-235 (615)
105 4g56_B MGC81050 protein; prote 95.0 0.95 3.2E-05 41.8 16.3 108 121-243 53-167 (357)
106 3mmy_A MRNA export factor; mRN 94.9 0.24 8.2E-06 45.3 12.1 63 121-201 97-162 (368)
107 3zwl_B Eukaryotic translation 94.9 0.79 2.7E-05 41.7 15.5 67 121-200 85-152 (369)
108 3bg1_A Protein SEC13 homolog; 94.9 0.34 1.2E-05 43.9 12.7 104 121-244 24-134 (316)
109 2qc5_A Streptogramin B lactona 94.9 1.9 6.4E-05 38.0 21.6 118 90-228 41-163 (300)
110 1vyh_C Platelet-activating fac 94.9 0.3 1E-05 46.3 12.8 99 121-243 161-262 (410)
111 2hqs_A Protein TOLB; TOLB, PAL 94.8 0.61 2.1E-05 44.3 14.8 101 90-206 203-307 (415)
112 3no2_A Uncharacterized protein 94.8 1.8 6.3E-05 38.3 17.1 210 121-401 4-230 (276)
113 3fm0_A Protein CIAO1; WDR39,SG 94.8 0.25 8.5E-06 45.5 11.7 159 171-381 27-190 (345)
114 3sfz_A APAF-1, apoptotic pepti 94.8 0.33 1.1E-05 53.1 14.5 101 121-244 1014-1114(1249)
115 1qhu_A Protein (hemopexin); be 94.8 1.8 6.3E-05 41.5 17.8 48 171-231 158-207 (460)
116 1pjx_A Dfpase, DIISOPROPYLFLUO 94.8 0.59 2E-05 41.8 14.0 99 121-229 28-135 (314)
117 3nok_A Glutaminyl cyclase; bet 94.8 0.61 2.1E-05 41.2 13.3 135 215-400 58-196 (268)
118 3lrv_A PRE-mRNA-splicing facto 94.7 2.4 8.2E-05 38.6 20.5 66 121-202 138-204 (343)
119 3mkq_A Coatomer beta'-subunit; 94.7 0.38 1.3E-05 49.8 14.1 101 121-244 66-170 (814)
120 3i2n_A WD repeat-containing pr 94.7 0.28 9.6E-06 44.7 11.8 104 121-245 128-242 (357)
121 2vdu_B TRNA (guanine-N(7)-)-me 94.6 1.6 5.3E-05 41.7 17.4 41 364-404 331-374 (450)
122 1nir_A Nitrite reductase; hemo 94.6 0.63 2.2E-05 46.1 14.8 280 33-375 148-461 (543)
123 1vyh_C Platelet-activating fac 94.6 0.72 2.5E-05 43.5 14.7 100 121-244 119-221 (410)
124 1pgu_A Actin interacting prote 94.6 0.54 1.8E-05 46.6 14.4 53 340-404 263-318 (615)
125 1sq9_A Antiviral protein SKI8; 94.6 0.55 1.9E-05 43.6 13.7 63 123-199 82-157 (397)
126 3ei3_B DNA damage-binding prot 94.5 0.36 1.2E-05 44.9 12.1 61 121-199 174-236 (383)
127 2ecf_A Dipeptidyl peptidase IV 94.4 1.2 4.2E-05 45.5 17.1 68 121-207 119-189 (741)
128 3iz6_a 40S ribosomal protein R 94.4 3.1 0.00011 38.5 19.2 57 337-405 306-366 (380)
129 3azo_A Aminopeptidase; POP fam 94.4 1.7 5.9E-05 43.7 17.9 241 90-378 102-375 (662)
130 2pbi_B Guanine nucleotide-bind 94.4 1.1 3.8E-05 41.2 15.3 100 121-244 165-269 (354)
131 1ri6_A Putative isomerase YBHE 94.4 1.3 4.5E-05 39.8 15.6 50 139-198 61-114 (343)
132 3scy_A Hypothetical bacterial 94.4 0.96 3.3E-05 41.5 14.8 98 124-228 15-116 (361)
133 2aq5_A Coronin-1A; WD40 repeat 94.3 0.25 8.5E-06 46.5 10.8 103 121-243 93-204 (402)
134 3iz6_a 40S ribosomal protein R 94.3 3.3 0.00011 38.4 20.6 102 122-244 170-278 (380)
135 1erj_A Transcriptional repress 94.3 0.97 3.3E-05 42.3 14.8 99 121-243 134-235 (393)
136 2ad6_A Methanol dehydrogenase 94.2 4.8 0.00016 39.9 25.1 79 116-205 110-193 (571)
137 3k26_A Polycomb protein EED; W 94.2 0.39 1.3E-05 43.9 11.5 101 122-244 85-190 (366)
138 3v9f_A Two-component system se 94.1 5.2 0.00018 41.3 21.1 198 140-401 385-600 (781)
139 3b7f_A Glycosyl hydrolase, BNR 94.1 3.8 0.00013 38.3 19.0 95 100-206 43-154 (394)
140 2ynn_A Coatomer subunit beta'; 94.1 0.71 2.4E-05 41.4 12.9 101 121-244 66-170 (304)
141 3pe7_A Oligogalacturonate lyas 94.0 1.1 3.7E-05 41.5 14.4 65 138-207 168-233 (388)
142 1yfq_A Cell cycle arrest prote 94.0 3.3 0.00011 37.1 19.3 52 340-406 262-315 (342)
143 1yfq_A Cell cycle arrest prote 94.0 1.7 5.9E-05 39.1 15.5 101 121-244 22-129 (342)
144 4e54_B DNA damage-binding prot 94.0 4.3 0.00015 38.3 19.5 101 121-244 176-280 (435)
145 1kb0_A Quinohemoprotein alcoho 93.8 6.5 0.00022 39.9 22.5 99 115-229 71-182 (677)
146 3f3f_A Nucleoporin SEH1; struc 93.8 1.5 5E-05 39.3 14.5 65 121-200 22-91 (351)
147 3u4y_A Uncharacterized protein 93.6 0.98 3.4E-05 40.7 13.1 64 121-202 9-74 (331)
148 4gga_A P55CDC, cell division c 93.6 1.5 5.2E-05 41.3 14.8 83 139-232 126-209 (420)
149 3c5m_A Oligogalacturonate lyas 93.6 4.3 0.00015 37.3 18.0 63 138-207 168-233 (396)
150 4a11_B DNA excision repair pro 93.4 0.69 2.4E-05 42.9 11.9 65 121-201 111-177 (408)
151 3k26_A Polycomb protein EED; W 93.4 2.4 8.1E-05 38.4 15.5 66 121-201 127-194 (366)
152 1pex_A Collagenase-3, MMP-13; 93.3 2.5 8.7E-05 35.7 14.0 47 340-402 127-182 (207)
153 3sfz_A APAF-1, apoptotic pepti 93.3 1.7 5.8E-05 47.4 16.3 130 90-244 1025-1156(1249)
154 2dg1_A DRP35, lactonase; beta 93.0 2.8 9.5E-05 37.8 15.2 96 121-229 55-153 (333)
155 3f3f_A Nucleoporin SEH1; struc 93.0 3.1 0.00011 37.0 15.4 31 339-381 316-347 (351)
156 1kv9_A Type II quinohemoprotei 92.6 9.7 0.00033 38.5 23.7 78 117-204 113-194 (668)
157 3e5z_A Putative gluconolactona 92.0 6.1 0.00021 34.8 17.7 87 122-227 40-131 (296)
158 1pby_B Quinohemoprotein amine 92.0 3.4 0.00012 36.9 14.2 148 36-203 3-167 (337)
159 3iuj_A Prolyl endopeptidase; h 91.9 9.6 0.00033 38.7 18.9 241 91-379 156-412 (693)
160 1jmx_B Amine dehydrogenase; ox 91.8 4.8 0.00016 36.1 15.1 68 121-204 10-79 (349)
161 2aq5_A Coronin-1A; WD40 repeat 91.8 4.7 0.00016 37.4 15.5 24 171-202 93-116 (402)
162 4a11_B DNA excision repair pro 91.7 0.69 2.4E-05 42.9 9.4 105 121-244 55-173 (408)
163 3i2n_A WD repeat-containing pr 91.6 1.8 6.2E-05 39.1 12.0 99 122-243 80-196 (357)
164 2z3z_A Dipeptidyl aminopeptida 91.6 6.8 0.00023 39.6 17.4 61 309-379 336-398 (706)
165 2bkl_A Prolyl endopeptidase; m 91.6 13 0.00044 37.7 22.5 107 120-231 78-188 (695)
166 3ei3_B DNA damage-binding prot 91.6 4.4 0.00015 37.2 14.8 101 123-243 87-191 (383)
167 4aow_A Guanine nucleotide-bind 91.5 2.6 8.9E-05 37.8 12.9 95 122-231 51-149 (340)
168 2ecf_A Dipeptidyl peptidase IV 91.0 3.4 0.00012 42.1 14.5 33 121-154 47-80 (741)
169 2ad6_A Methanol dehydrogenase 91.0 13 0.00045 36.7 20.6 100 115-229 56-168 (571)
170 3mmy_A MRNA export factor; mRN 91.0 2.5 8.6E-05 38.2 12.3 101 122-244 54-158 (368)
171 3g4e_A Regucalcin; six bladed 90.9 3.7 0.00013 36.5 13.1 86 121-227 24-114 (297)
172 3pe7_A Oligogalacturonate lyas 90.8 6.5 0.00022 36.0 15.2 108 91-206 61-184 (388)
173 2vdu_B TRNA (guanine-N(7)-)-me 90.5 12 0.0004 35.4 17.1 62 310-376 334-397 (450)
174 4gqb_B Methylosome protein 50; 90.4 7.2 0.00025 35.6 14.9 65 167-244 88-156 (344)
175 1w6s_A Methanol dehydrogenase 90.3 16 0.00054 36.5 18.1 99 115-228 56-173 (599)
176 1nir_A Nitrite reductase; hemo 90.0 3.3 0.00011 40.8 12.9 63 120-201 147-213 (543)
177 3b7f_A Glycosyl hydrolase, BNR 89.9 12 0.00042 34.7 21.7 60 140-206 33-97 (394)
178 3no2_A Uncharacterized protein 89.7 10 0.00035 33.4 16.1 170 34-230 5-184 (276)
179 3g4e_A Regucalcin; six bladed 89.6 2.6 9E-05 37.5 10.9 215 33-285 24-263 (297)
180 4ggc_A P55CDC, cell division c 89.4 9.1 0.00031 33.6 14.5 82 139-231 46-128 (318)
181 3azo_A Aminopeptidase; POP fam 89.3 19 0.00064 35.9 20.6 203 139-379 103-332 (662)
182 2ymu_A WD-40 repeat protein; u 89.2 5.1 0.00018 39.1 13.7 54 338-404 517-570 (577)
183 1yiq_A Quinohemoprotein alcoho 89.2 21 0.00071 36.3 21.7 98 115-228 64-174 (689)
184 2xdw_A Prolyl endopeptidase; a 88.7 20 0.00067 36.4 18.0 134 138-285 208-356 (710)
185 1pby_B Quinohemoprotein amine 88.6 4.6 0.00016 36.0 11.9 76 123-204 47-129 (337)
186 1q7f_A NHL, brain tumor CG1071 88.6 12 0.0004 32.6 18.2 56 166-229 34-96 (286)
187 3dm0_A Maltose-binding peripla 88.5 11 0.00037 38.1 15.7 103 121-244 483-590 (694)
188 2bkl_A Prolyl endopeptidase; m 88.4 19 0.00065 36.4 17.6 182 91-285 148-339 (695)
189 1erj_A Transcriptional repress 88.3 9.9 0.00034 35.2 14.4 60 171-244 134-194 (393)
190 3lrv_A PRE-mRNA-splicing facto 88.3 14 0.00048 33.2 18.1 61 171-244 138-199 (343)
191 3c5m_A Oligogalacturonate lyas 88.2 15 0.00051 33.5 16.4 83 309-402 217-301 (396)
192 3hxj_A Pyrrolo-quinoline quino 87.6 11 0.00037 33.6 13.8 87 118-228 104-194 (330)
193 1jmx_B Amine dehydrogenase; ox 87.5 15 0.00051 32.7 15.0 154 32-203 9-179 (349)
194 1itv_A MMP9; adaptive molecula 87.5 6.4 0.00022 32.9 11.0 49 339-403 108-165 (195)
195 2ymu_A WD-40 repeat protein; u 87.4 15 0.0005 35.8 15.7 64 121-202 314-378 (577)
196 1nr0_A Actin interacting prote 87.4 24 0.00082 34.9 21.2 27 121-153 335-361 (611)
197 1nr0_A Actin interacting prote 87.4 22 0.00074 35.2 17.0 101 121-243 114-218 (611)
198 1kb0_A Quinohemoprotein alcoho 87.3 27 0.00091 35.3 18.8 80 116-205 123-207 (677)
199 1pjx_A Dfpase, DIISOPROPYLFLUO 87.3 7.5 0.00026 34.3 12.4 93 91-198 93-206 (314)
200 2xyi_A Probable histone-bindin 86.7 6.1 0.00021 37.2 12.0 20 122-147 141-160 (430)
201 2dg1_A DRP35, lactonase; beta 86.4 4.2 0.00014 36.5 10.2 150 33-199 55-213 (333)
202 1w6s_A Methanol dehydrogenase 86.3 27 0.00092 34.7 16.7 64 139-205 132-199 (599)
203 4ggc_A P55CDC, cell division c 86.3 16 0.00056 31.9 20.4 57 89-151 44-102 (318)
204 3dm0_A Maltose-binding peripla 86.1 7.7 0.00026 39.2 13.1 66 122-202 395-464 (694)
205 2xzm_R RACK1; ribosome, transl 85.9 15 0.00052 33.0 13.9 102 121-244 38-147 (343)
206 1kv9_A Type II quinohemoprotei 85.6 32 0.0011 34.6 23.6 98 115-228 60-169 (668)
207 3o4h_A Acylamino-acid-releasin 85.5 8.9 0.0003 37.7 12.9 199 118-377 29-232 (582)
208 1hxn_A Hemopexin, HPX; heme, b 84.7 5 0.00017 34.2 9.1 55 220-284 27-81 (219)
209 3frx_A Guanine nucleotide-bind 84.6 13 0.00046 33.1 12.7 63 121-201 76-140 (319)
210 3frx_A Guanine nucleotide-bind 84.3 12 0.0004 33.5 12.2 99 121-244 118-225 (319)
211 3ba0_A Macrophage metalloelast 84.0 22 0.00075 32.9 13.9 47 340-402 284-340 (365)
212 1sqj_A OXG-RCBH, oligoxylogluc 83.8 43 0.0015 34.5 28.2 235 99-383 3-280 (789)
213 3ott_A Two-component system se 83.7 30 0.001 35.3 16.4 52 310-378 538-592 (758)
214 3o4h_A Acylamino-acid-releasin 82.9 8.8 0.0003 37.7 11.6 97 94-205 136-233 (582)
215 3hxj_A Pyrrolo-quinoline quino 82.3 26 0.00088 30.9 14.6 81 121-227 70-153 (330)
216 1sqj_A OXG-RCBH, oligoxylogluc 82.1 50 0.0017 34.1 22.4 245 93-379 40-340 (789)
217 2cn3_A Xyloglucanase, beta-1,4 81.9 48 0.0017 33.8 26.3 259 99-402 10-321 (737)
218 1k32_A Tricorn protease; prote 81.7 24 0.00082 37.6 15.1 80 139-230 359-440 (1045)
219 3fvz_A Peptidyl-glycine alpha- 81.4 29 0.001 31.0 22.6 216 139-403 70-311 (329)
220 3e5z_A Putative gluconolactona 80.9 28 0.00095 30.4 15.7 172 35-228 41-235 (296)
221 3qhy_B Beta-lactamase inhibito 80.8 25 0.00087 31.0 12.7 135 114-285 34-168 (282)
222 1itv_A MMP9; adaptive molecula 80.6 23 0.0008 29.3 12.9 27 336-376 152-178 (195)
223 1qks_A Cytochrome CD1 nitrite 80.4 19 0.00066 35.5 12.8 163 33-218 166-348 (567)
224 1xfd_A DIP, dipeptidyl aminope 80.1 34 0.0012 34.3 15.1 77 121-206 71-150 (723)
225 2p4o_A Hypothetical protein; p 80.1 31 0.0011 30.5 16.2 145 33-199 42-198 (306)
226 2ghs_A AGR_C_1268P; regucalcin 80.0 33 0.0011 30.7 15.8 66 122-207 61-126 (326)
227 1gen_A Gelatinase A; hydrolase 79.6 27 0.00094 29.5 14.3 50 339-402 134-192 (218)
228 1qks_A Cytochrome CD1 nitrite 79.5 19 0.00066 35.5 12.5 59 121-198 166-226 (567)
229 3v65_B Low-density lipoprotein 79.2 40 0.0014 31.2 20.2 193 139-402 97-306 (386)
230 2xyi_A Probable histone-bindin 79.0 14 0.00049 34.6 11.1 19 342-372 291-309 (430)
231 1su3_A Interstitial collagenas 78.7 43 0.0015 31.9 14.2 47 340-402 367-422 (450)
232 4a2l_A BT_4663, two-component 77.4 68 0.0023 32.8 23.0 100 91-207 194-299 (795)
233 2fp8_A Strictosidine synthase; 77.0 35 0.0012 30.3 12.7 82 116-205 84-180 (322)
234 3oyo_A Hemopexin fold protein 76.4 18 0.00061 30.9 9.8 50 339-402 126-188 (225)
235 1n7d_A LDL receptor, low-densi 76.3 49 0.0017 33.5 14.7 51 340-402 551-602 (699)
236 4h5i_A Guanine nucleotide-exch 76.0 46 0.0016 30.2 15.5 81 139-232 158-241 (365)
237 2p4o_A Hypothetical protein; p 75.8 42 0.0014 29.6 25.3 112 99-227 19-133 (306)
238 3c7x_A Matrix metalloproteinas 75.0 35 0.0012 28.3 12.5 47 340-402 109-165 (196)
239 1su3_A Interstitial collagenas 75.0 38 0.0013 32.3 12.6 28 336-377 410-437 (450)
240 3a0f_A Xyloglucanase; beta-pro 74.9 79 0.0027 32.4 22.3 198 94-326 47-294 (763)
241 1ijq_A LDL receptor, low-densi 74.2 48 0.0016 29.5 20.5 198 139-402 11-226 (316)
242 1yiq_A Quinohemoprotein alcoho 74.1 31 0.0011 34.9 12.6 121 216-377 65-199 (689)
243 3fvz_A Peptidyl-glycine alpha- 73.1 51 0.0017 29.4 23.3 96 121-230 154-259 (329)
244 3oyo_A Hemopexin fold protein 71.8 30 0.001 29.4 10.1 19 339-371 179-197 (225)
245 2xdw_A Prolyl endopeptidase; a 71.2 89 0.0031 31.4 22.5 81 120-205 82-166 (710)
246 3c7x_A Matrix metalloproteinas 70.4 45 0.0015 27.6 10.9 21 340-374 156-177 (196)
247 2fp8_A Strictosidine synthase; 69.0 62 0.0021 28.6 15.0 81 139-228 41-144 (322)
248 3hrp_A Uncharacterized protein 68.9 75 0.0025 29.6 19.4 91 121-227 141-236 (409)
249 3a0f_A Xyloglucanase; beta-pro 67.2 1.2E+02 0.004 31.1 22.7 203 140-383 45-295 (763)
250 1npe_A Nidogen, entactin; glyc 66.8 60 0.0021 27.7 15.5 171 33-229 47-226 (267)
251 1flg_A Protein (quinoprotein e 66.8 1E+02 0.0035 30.3 20.4 75 115-205 62-144 (582)
252 2hz6_A Endoplasmic reticulum t 66.7 2.5 8.6E-05 39.2 2.3 52 167-231 5-58 (369)
253 3dw8_B Serine/threonine-protei 66.7 79 0.0027 29.0 16.2 29 337-377 350-378 (447)
254 1yr2_A Prolyl oligopeptidase; 64.7 1.2E+02 0.0042 30.5 16.3 133 138-285 243-383 (741)
255 3sjl_D Methylamine dehydrogena 63.7 94 0.0032 28.8 14.0 111 33-151 44-173 (386)
256 3v64_C Agrin; beta propeller, 62.1 92 0.0031 28.2 21.6 195 139-402 54-263 (349)
257 2xzm_R RACK1; ribosome, transl 61.5 88 0.003 27.8 13.6 19 221-244 87-105 (343)
258 2gop_A Trilobed protease; beta 60.4 90 0.0031 27.5 12.4 62 136-208 41-103 (347)
259 3qhy_B Beta-lactamase inhibito 59.3 83 0.0028 27.5 10.9 57 164-231 151-207 (282)
260 3ju4_A Endo-N-acetylneuraminid 58.0 1.2E+02 0.0042 28.3 19.9 124 101-230 271-406 (670)
261 3ott_A Two-component system se 57.7 1.6E+02 0.0056 29.7 19.8 47 170-227 72-118 (758)
262 2ghs_A AGR_C_1268P; regucalcin 57.4 25 0.00087 31.4 7.3 141 34-198 61-209 (326)
263 3ju4_A Endo-N-acetylneuraminid 54.8 1.4E+02 0.0048 28.0 19.2 193 147-351 269-483 (670)
264 3p5b_L Low density lipoprotein 53.8 1.4E+02 0.0047 27.6 19.6 195 139-401 93-307 (400)
265 3m0c_C LDL receptor, low-densi 53.5 2E+02 0.007 29.5 19.6 193 139-402 405-620 (791)
266 1n7d_A LDL receptor, low-densi 53.0 1.9E+02 0.0066 29.1 19.0 92 115-228 409-514 (699)
267 1pex_A Collagenase-3, MMP-13; 51.7 1E+02 0.0036 25.6 18.3 138 117-284 29-183 (207)
268 2ece_A 462AA long hypothetical 51.1 1.7E+02 0.0058 27.9 15.2 72 121-201 95-175 (462)
269 4h5i_A Guanine nucleotide-exch 49.3 1.5E+02 0.0051 26.7 19.5 61 337-405 227-291 (365)
270 3v65_B Low-density lipoprotein 48.0 1.7E+02 0.0057 26.8 21.0 115 92-228 98-220 (386)
271 3vu4_A KMHSV2; beta-propeller 45.9 1.6E+02 0.0056 26.2 16.7 23 33-60 70-92 (355)
272 1flg_A Protein (quinoprotein e 45.7 1.2E+02 0.004 29.9 10.5 121 216-377 63-200 (582)
273 3iuj_A Prolyl endopeptidase; h 45.2 2.5E+02 0.0084 28.1 15.2 59 308-378 259-323 (693)
274 1npe_A Nidogen, entactin; glyc 44.7 1.4E+02 0.0049 25.2 22.7 91 121-229 47-141 (267)
275 1jof_A Carboxy-CIS,CIS-muconat 42.0 1.9E+02 0.0065 25.8 12.8 66 126-203 6-74 (365)
276 3vu4_A KMHSV2; beta-propeller 41.1 1.9E+02 0.0066 25.7 16.1 24 339-374 205-229 (355)
277 3dr2_A Exported gluconolactona 39.4 1.3E+02 0.0046 26.0 9.1 102 91-201 108-226 (305)
278 3sjl_D Methylamine dehydrogena 39.0 61 0.0021 30.1 6.7 72 121-204 291-368 (386)
279 1yr2_A Prolyl oligopeptidase; 38.8 3.1E+02 0.011 27.5 20.1 80 121-205 118-204 (741)
280 3hrp_A Uncharacterized protein 37.8 2.4E+02 0.0084 25.9 17.6 34 165-206 134-168 (409)
281 1ck7_A Protein (gelatinase A); 37.3 61 0.0021 32.3 6.7 51 339-403 547-606 (631)
282 1ijq_A LDL receptor, low-densi 34.7 2.4E+02 0.008 24.8 20.4 113 92-228 12-138 (316)
283 2cn3_A Xyloglucanase, beta-1,4 33.9 3.8E+02 0.013 27.0 23.4 207 147-402 10-262 (737)
284 2gop_A Trilobed protease; beta 32.5 1.2E+02 0.004 26.7 7.6 104 90-207 152-259 (347)
285 3tc9_A Hypothetical hydrolase; 32.5 1.9E+02 0.0065 27.0 9.2 49 171-230 149-199 (430)
286 3gre_A Serine/threonine-protei 31.6 3E+02 0.01 25.0 16.3 61 171-244 181-243 (437)
287 3c75_H MADH, methylamine dehyd 31.0 3.3E+02 0.011 25.4 16.0 111 33-151 84-213 (426)
288 1hxn_A Hemopexin, HPX; heme, b 30.6 2.4E+02 0.0082 23.6 16.0 58 120-199 27-90 (219)
289 3lp9_A LS-24; SEED albumin, pl 30.0 1.5E+02 0.005 25.1 7.2 92 120-230 71-192 (227)
290 4d9s_A UVB-resistance protein 27.6 2.4E+02 0.0082 26.0 9.0 17 213-229 182-199 (406)
291 1k32_A Tricorn protease; prote 27.2 5.7E+02 0.019 26.9 21.7 114 91-207 34-151 (1045)
292 3m0c_C LDL receptor, low-densi 26.3 5.4E+02 0.018 26.3 21.3 88 121-228 435-532 (791)
293 1gen_A Gelatinase A; hydrolase 26.3 2.8E+02 0.0097 23.1 12.1 92 121-230 87-193 (218)
294 4d9s_A UVB-resistance protein 25.0 2.9E+02 0.01 25.3 9.1 17 113-129 182-199 (406)
295 3v64_C Agrin; beta propeller, 24.4 3.8E+02 0.013 23.9 22.4 115 92-228 55-177 (349)
296 3ba0_A Macrophage metalloelast 22.4 4.4E+02 0.015 23.9 16.8 94 116-230 185-293 (365)
297 4a5s_A Dipeptidyl peptidase 4 21.9 6E+02 0.021 25.3 18.4 21 137-157 91-111 (740)
298 4hvt_A Ritya.17583.B, post-pro 21.1 6.4E+02 0.022 25.3 12.4 39 189-230 268-308 (711)
299 2oaj_A Protein SNI1; WD40 repe 20.6 7.2E+02 0.024 25.7 12.9 177 171-405 28-233 (902)
300 3tc9_A Hypothetical hydrolase; 20.3 5.1E+02 0.018 23.9 15.9 95 90-202 159-260 (430)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=7.4e-50 Score=375.37 Aligned_cols=288 Identities=17% Similarity=0.266 Sum_probs=245.0
Q ss_pred HHHHHHhhcceeeeecCCCcccceeeeeeecCCCCeEEecCCCCCCCcceeeeecCCCCcCcccccccccccccCCCeEE
Q 014195 25 MILGFALVADFFWASSSKFTSSYLNIASNWSPYHNSIILPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAPELKWEK 104 (429)
Q Consensus 25 ~~~~~~~~~~~ly~~GG~~~~~~~~~~~~yd~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 104 (429)
..|+++.+++.||++||. ....+++++ .||+.+++|+.
T Consensus 16 ~~~~~~~~~~~i~v~GG~-~~~~~~~~~-----------------------------------------~~d~~~~~W~~ 53 (308)
T 1zgk_A 16 RGSHAPKVGRLIYTAGGY-FRQSLSYLE-----------------------------------------AYNPSNGTWLR 53 (308)
T ss_dssp -----CCCCCCEEEECCB-SSSBCCCEE-----------------------------------------EEETTTTEEEE
T ss_pred CCccccCCCCEEEEEeCc-CCCCcceEE-----------------------------------------EEcCCCCeEeE
Confidence 478899999999999997 333444444 45567889999
Q ss_pred ccCCCCCccCCcEEEECCEEEEEeccC---CCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEeCCEEEEEeCee
Q 014195 105 MKAAPVPRLDGAAIQIKNLLYVFAGYG---SIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQY 181 (429)
Q Consensus 105 ~~~~p~~R~~~~~~~~~~~iyv~GG~~---~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~ 181 (429)
++++|.+|..|+++.++++|||+||.. ......+++++||+.+++|+.++++|. +|..|++++++++||++||.+
T Consensus 54 ~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~~~~~iyv~GG~~ 131 (308)
T 1zgk_A 54 LADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSV--PRNRIGVGVIDGHIYAVGGSH 131 (308)
T ss_dssp CCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSS--CCBTCEEEEETTEEEEECCEE
T ss_pred CCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCc--CccccEEEEECCEEEEEcCCC
Confidence 999999999999999999999999984 333456789999999999999999987 788999999999999999987
Q ss_pred CCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEEECCEEEEEeCCCCCCCCccccceEeeeecCCccccceeeccC
Q 014195 182 GPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIP 261 (429)
Q Consensus 182 ~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 261 (429)
+... .+++++||+.+++|+.++++|.+|..|+++.++++||++||.+......+++.| |+.+++|+.+++
T Consensus 132 ~~~~---~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~y-------d~~~~~W~~~~~ 201 (308)
T 1zgk_A 132 GCIH---HNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECY-------YPERNEWRMITA 201 (308)
T ss_dssp TTEE---CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEE-------ETTTTEEEECCC
T ss_pred CCcc---cccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEE-------eCCCCeEeeCCC
Confidence 7543 789999999999999999999999999999999999999998765543333333 489999999999
Q ss_pred CCCCCCceeEEEeCCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCCCCCCCCCcceeEEEEC
Q 014195 262 IPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLVN 340 (429)
Q Consensus 262 ~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~~~~r~~~~~~~~~~~ 340 (429)
+|.++..+++++++++|||+||.+... ..++++.|| .+++|+.++++|.+|..+. +++++
T Consensus 202 ~p~~r~~~~~~~~~~~iyv~GG~~~~~-----------------~~~~v~~yd~~~~~W~~~~~~p~~r~~~~--~~~~~ 262 (308)
T 1zgk_A 202 MNTIRSGAGVCVLHNCIYAAGGYDGQD-----------------QLNSVERYDVETETWTFVAPMKHRRSALG--ITVHQ 262 (308)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBCSSS-----------------BCCCEEEEETTTTEEEECCCCSSCCBSCE--EEEET
T ss_pred CCCccccceEEEECCEEEEEeCCCCCC-----------------ccceEEEEeCCCCcEEECCCCCCCccceE--EEEEC
Confidence 999999999999999999999986432 356899999 9999999999999988654 57889
Q ss_pred CEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEEecccCcceeeeeeEE
Q 014195 341 NSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIGKLPYRVKTTLAGY 392 (429)
Q Consensus 341 ~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v~~lp~~r~~~~~~~ 392 (429)
++|||+||.+... .++++++||+++++|+.+++||.+|..|++++
T Consensus 263 ~~i~v~GG~~~~~-------~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~ 307 (308)
T 1zgk_A 263 GRIYVLGGYDGHT-------FLDSVECYDPDTDTWSEVTRMTSGRSGVGVAV 307 (308)
T ss_dssp TEEEEECCBCSSC-------BCCEEEEEETTTTEEEEEEECSSCCBSCEEEE
T ss_pred CEEEEEcCcCCCc-------ccceEEEEcCCCCEEeecCCCCCCcccceeEe
Confidence 9999999987654 57899999999999999999999999998875
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.8e-49 Score=371.63 Aligned_cols=269 Identities=18% Similarity=0.294 Sum_probs=231.3
Q ss_pred cccccccCCCeEEccCCCCCccCCcEEEECCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEeC
Q 014195 92 FQDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDG 171 (429)
Q Consensus 92 ~~~~d~~~~~W~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~ 171 (429)
++.||+.+++|++++++|.+|..|+++.++++|||+||.++... .+++++||+.+++|+.++++|. +|..|++++++
T Consensus 32 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~-~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~~~ 108 (302)
T 2xn4_A 32 VECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLR-VRTVDSYDPVKDQWTSVANMRD--RRSTLGAAVLN 108 (302)
T ss_dssp EEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSB-CCCEEEEETTTTEEEEECCCSS--CCBSCEEEEET
T ss_pred EEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCcc-ccceEEECCCCCceeeCCCCCc--cccceEEEEEC
Confidence 34455677889999999999999999999999999999876543 5779999999999999999987 78899999999
Q ss_pred CEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEEECCEEEEEeCCCCCCCCccccceEeeeecCCc
Q 014195 172 RYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKP 251 (429)
Q Consensus 172 ~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~ 251 (429)
++||++||.++... ++++++||+.+++|+.++++|.+|..|+++.++++||++||.+........+ ++.||+
T Consensus 109 ~~iyv~GG~~~~~~---~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~-----~~~yd~ 180 (302)
T 2xn4_A 109 GLLYAVGGFDGSTG---LSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLST-----VECYNA 180 (302)
T ss_dssp TEEEEEEEECSSCE---EEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCC-----EEEEET
T ss_pred CEEEEEcCCCCCcc---CceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccE-----EEEEeC
Confidence 99999999876543 7899999999999999999999999999999999999999986542111122 233459
Q ss_pred cccceeeccCCCCCCCceeEEEeCCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCCCCCCCC
Q 014195 252 LEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDS 330 (429)
Q Consensus 252 ~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~~~~r~ 330 (429)
.+++|+.++++|.++..+++++++++|||+||.++.. ..++++.|| .+++|+.++++|.+|.
T Consensus 181 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-----------------~~~~~~~yd~~~~~W~~~~~~~~~r~ 243 (302)
T 2xn4_A 181 TTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPL-----------------VRKSVEVYDPTTNAWRQVADMNMCRR 243 (302)
T ss_dssp TTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSS-----------------BCCCEEEEETTTTEEEEECCCSSCCB
T ss_pred CCCcEEECCCCccccccccEEEECCEEEEECCCCCCc-----------------ccceEEEEeCCCCCEeeCCCCCCccc
Confidence 9999999999999999999999999999999986432 356799999 8999999999999988
Q ss_pred CcceeEEEECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEEec-ccCcceeeeeeEEECCEE
Q 014195 331 HIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIG-KLPYRVKTTLAGYWNGWL 397 (429)
Q Consensus 331 ~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v~-~lp~~r~~~~~~~~~~~i 397 (429)
.+. ++.++++|||+||.+... .++++++||+++++|+.++ +||.+|..|++++++++|
T Consensus 244 ~~~--~~~~~~~i~v~GG~~~~~-------~~~~v~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~i 302 (302)
T 2xn4_A 244 NAG--VCAVNGLLYVVGGDDGSC-------NLASVEYYNPTTDKWTVVSSCMSTGRSYAGVTVIDKRL 302 (302)
T ss_dssp SCE--EEEETTEEEEECCBCSSS-------BCCCEEEEETTTTEEEECSSCCSSCCBSCEEEEEEC--
T ss_pred cCe--EEEECCEEEEECCcCCCc-------ccccEEEEcCCCCeEEECCcccCcccccceEEEecccC
Confidence 654 578899999999987654 4679999999999999997 899999999999998875
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=2.7e-48 Score=364.29 Aligned_cols=264 Identities=21% Similarity=0.335 Sum_probs=229.5
Q ss_pred ccccccCCCeEEccCCCCCccCCcEEEECCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEeCC
Q 014195 93 QDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGR 172 (429)
Q Consensus 93 ~~~d~~~~~W~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~ 172 (429)
+.||+.+++|+.++++|.+|.+|+++.++++|||+||.+ ....+++++||+.+++|+.++++|. +|.+|+++.+++
T Consensus 27 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~--~~~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~~~~ 102 (306)
T 3ii7_A 27 RYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQ--LFPIKRMDCYNVVKDSWYSKLGPPT--PRDSLAACAAEG 102 (306)
T ss_dssp EEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBS--SSBCCEEEEEETTTTEEEEEECCSS--CCBSCEEEEETT
T ss_pred EEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCC--CCCcceEEEEeCCCCeEEECCCCCc--cccceeEEEECC
Confidence 344557889999999999999999999999999999988 4456789999999999999999987 789999999999
Q ss_pred EEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEEECCEEEEEeCCCCCCC----CccccceEeeeec
Q 014195 173 YIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRY----TPEVDHWSLAVKD 248 (429)
Q Consensus 173 ~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~----~~~~~~~~~~~~~ 248 (429)
+||++||.+.... ..+++++||+.+++|+.++++|.+|..|+++.++++||++||...... ..+++ .
T Consensus 103 ~iyv~GG~~~~~~--~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~-------~ 173 (306)
T 3ii7_A 103 KIYTSGGSEVGNS--ALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCE-------V 173 (306)
T ss_dssp EEEEECCBBTTBS--CCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEE-------E
T ss_pred EEEEECCCCCCCc--EeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEE-------E
Confidence 9999999873332 378999999999999999999999999999999999999999865433 33333 3
Q ss_pred CCccccceeeccCCCCCCCceeEEEeCCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCCCCC
Q 014195 249 GKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPK 327 (429)
Q Consensus 249 ~d~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~~~ 327 (429)
||+.+++|+.++++|.++..+++++++++|||+||.+... ..++++.|| .+++|+.++++|.
T Consensus 174 yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~-----------------~~~~~~~yd~~~~~W~~~~~~p~ 236 (306)
T 3ii7_A 174 YDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLG-----------------GLDNVEYYDIKLNEWKMVSPMPW 236 (306)
T ss_dssp EETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTE-----------------EBCCEEEEETTTTEEEECCCCSC
T ss_pred eCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCC-----------------CCceEEEeeCCCCcEEECCCCCC
Confidence 3599999999999999999999999999999999986431 467899999 8999999999999
Q ss_pred CCCCcceeEEEECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEEecccCcceeeeeeEEECC
Q 014195 328 PDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIGKLPYRVKTTLAGYWNG 395 (429)
Q Consensus 328 ~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v~~lp~~r~~~~~~~~~~ 395 (429)
+|..+. +++++++|||+||.+... .+++++.||+++++|+.++++|.+|..|+++.+.+
T Consensus 237 ~r~~~~--~~~~~~~i~v~GG~~~~~-------~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~ 295 (306)
T 3ii7_A 237 KGVTVK--CAAVGSIVYVLAGFQGVG-------RLGHILEYNTETDKWVANSKVRAFPVTSCLICVVD 295 (306)
T ss_dssp CBSCCE--EEEETTEEEEEECBCSSS-------BCCEEEEEETTTTEEEEEEEEECCSCTTCEEEEEE
T ss_pred Ccccee--EEEECCEEEEEeCcCCCe-------eeeeEEEEcCCCCeEEeCCCcccccceeEEEEECC
Confidence 988654 478899999999987654 47799999999999999999999999998876554
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=5.9e-48 Score=361.13 Aligned_cols=283 Identities=17% Similarity=0.305 Sum_probs=245.4
Q ss_pred hcceeeeecC-CCcccceeeeeeecCCCCeEEecCCCCCCCcceeeeecCCCCcCcccccccccccccCCCeEEccCCCC
Q 014195 32 VADFFWASSS-KFTSSYLNIASNWSPYHNSIILPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAPELKWEKMKAAPV 110 (429)
Q Consensus 32 ~~~~ly~~GG-~~~~~~~~~~~~yd~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 110 (429)
+++.||++|| .++...++++++| |+.+++|+.++++|.
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~-----------------------------------------d~~~~~W~~~~~~p~ 51 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKY-----------------------------------------DPKTQEWSFLPSITR 51 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEE-----------------------------------------ETTTTEEEECCCCSS
T ss_pred CCCEEEEEeCccCCCcceeEEEEE-----------------------------------------cCCCCeEEeCCCCCh
Confidence 7899999999 5554555555555 457789999999999
Q ss_pred CccCCcEEEECCEEEEEeccCCCCceeeeEEEEECCCCc---eeeCCCCCCCCccceeeEEEeCCEEEEEeCeeCCCCCC
Q 014195 111 PRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT---WGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRG 187 (429)
Q Consensus 111 ~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~---W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~ 187 (429)
+|..|+++.++++||++||.++.. ..+++++||+.+++ |+.++++|. +|..|+++..+++||++||..+...
T Consensus 52 ~r~~~~~~~~~~~l~v~GG~~~~~-~~~~~~~~d~~~~~~~~W~~~~~~p~--~r~~~~~~~~~~~lyv~GG~~~~~~-- 126 (301)
T 2vpj_A 52 KRRYVASVSLHDRIYVIGGYDGRS-RLSSVECLDYTADEDGVWYSVAPMNV--RRGLAGATTLGDMIYVSGGFDGSRR-- 126 (301)
T ss_dssp CCBSCEEEEETTEEEEECCBCSSC-BCCCEEEEETTCCTTCCCEEECCCSS--CCBSCEEEEETTEEEEECCBCSSCB--
T ss_pred hhccccEEEECCEEEEEcCCCCCc-cCceEEEEECCCCCCCeeEECCCCCC--CccceeEEEECCEEEEEcccCCCcc--
Confidence 999999999999999999987544 46789999999999 999999987 7899999999999999999876543
Q ss_pred CCceeEEEeCCCCceEeCCCCCCCCCCceEEEECCEEEEEeCCCCCCCCccccceEeeeecCCccccceeeccCCCCCCC
Q 014195 188 PTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGP 267 (429)
Q Consensus 188 ~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~ 267 (429)
.+++++||+.+++|+.++++|.+|..|++++++++||++||.+......+++.| |+.+++|+.++++|.++.
T Consensus 127 -~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~-------d~~~~~W~~~~~~p~~r~ 198 (301)
T 2vpj_A 127 -HTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKY-------DPHTGHWTNVTPMATKRS 198 (301)
T ss_dssp -CCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEE-------ETTTTEEEEECCCSSCCB
T ss_pred -cceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEE-------eCCCCcEEeCCCCCcccc
Confidence 789999999999999999999999999999999999999998765544444444 489999999999999999
Q ss_pred ceeEEEeCCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCCCCCCCCCcceeEEEECCEEEEE
Q 014195 268 HRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIV 346 (429)
Q Consensus 268 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~~~~r~~~~~~~~~~~~~i~v~ 346 (429)
.++++.++++|||+||.+... ..++++.|| .+++|+.++++|.+|..+. +++++++|||+
T Consensus 199 ~~~~~~~~~~i~v~GG~~~~~-----------------~~~~v~~yd~~~~~W~~~~~~p~~r~~~~--~~~~~~~i~v~ 259 (301)
T 2vpj_A 199 GAGVALLNDHIYVVGGFDGTA-----------------HLSSVEAYNIRTDSWTTVTSMTTPRCYVG--ATVLRGRLYAI 259 (301)
T ss_dssp SCEEEEETTEEEEECCBCSSS-----------------BCCCEEEEETTTTEEEEECCCSSCCBSCE--EEEETTEEEEE
T ss_pred cceEEEECCEEEEEeCCCCCc-----------------ccceEEEEeCCCCcEEECCCCCCccccee--EEEECCEEEEE
Confidence 999999999999999986432 356799999 8999999999999998654 47889999999
Q ss_pred cccCCCCCCccceeeeCcEEEEecCCCCeEEecccCcceeeeeeEEEC
Q 014195 347 GGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIGKLPYRVKTTLAGYWN 394 (429)
Q Consensus 347 GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v~~lp~~r~~~~~~~~~ 394 (429)
||.+... .++++++||+++++|+.+++||.+|..|+++.++
T Consensus 260 GG~~~~~-------~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~ 300 (301)
T 2vpj_A 260 AGYDGNS-------LLSSIECYDPIIDSWEVVTSMGTQRCDAGVCVLR 300 (301)
T ss_dssp CCBCSSS-------BEEEEEEEETTTTEEEEEEEEEEEEESCEEEEEE
T ss_pred cCcCCCc-------ccccEEEEcCCCCeEEEcCCCCcccccceEEEeC
Confidence 9987654 4679999999999999999999999999888764
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=2.3e-47 Score=359.47 Aligned_cols=277 Identities=18% Similarity=0.281 Sum_probs=229.9
Q ss_pred ccccCCCeEEccCC--CCCccCCcEEEECCEEEEEecc-----CCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeE
Q 014195 95 LPAPELKWEKMKAA--PVPRLDGAAIQIKNLLYVFAGY-----GSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGM 167 (429)
Q Consensus 95 ~d~~~~~W~~~~~~--p~~R~~~~~~~~~~~iyv~GG~-----~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~ 167 (429)
||+.+++|+. +++ |.+|.+|++++++++|||+||. .......+++++||+.+++|+.++++|. +|.+|++
T Consensus 18 yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~ 94 (315)
T 4asc_A 18 YDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPS--PRCLFGL 94 (315)
T ss_dssp EETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSS--CEESCEE
T ss_pred ECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCc--chhceeE
Confidence 3456777876 656 4589999999999999999996 2233455679999999999999999987 7999999
Q ss_pred EEeCCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEEECCEEEEEeCCC-CCCCCccccceEeee
Q 014195 168 VTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSG-ENRYTPEVDHWSLAV 246 (429)
Q Consensus 168 ~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~~~~~~ 246 (429)
+.++++||++||.+........+++++||+.+++|+.++++|.+|..|+++.++++|||+||.. ......+++.|
T Consensus 95 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~y---- 170 (315)
T 4asc_A 95 GEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVY---- 170 (315)
T ss_dssp EEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEE----
T ss_pred EEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEE----
Confidence 9999999999998642222347899999999999999999999999999999999999999983 33333333333
Q ss_pred ecCCccccceeeccCCCCCCCceeEEEeCCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCCC
Q 014195 247 KDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSM 325 (429)
Q Consensus 247 ~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~ 325 (429)
|+.+++|+.++++|.++..|++++++++|||+||.+... ..++++.|| .+++|+.++++
T Consensus 171 ---d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-----------------~~~~~~~yd~~~~~W~~~~~~ 230 (315)
T 4asc_A 171 ---DPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTG-----------------LTSSAEVYSITDNKWAPFEAF 230 (315)
T ss_dssp ---ETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSS-----------------EEEEEEEEETTTTEEEEECCC
T ss_pred ---eCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCC-----------------ccceEEEEECCCCeEEECCCC
Confidence 489999999999999999999999999999999986432 466899999 89999999999
Q ss_pred CCCCCCcceeEEEECCEEEEEcccCCCCCCcc--ceeeeCcEEEEecCCCCeEEecccCcceeeeeeEEECCEEEEEcc
Q 014195 326 PKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTK--KMVLVGEIFQFNLNTLKWHVIGKLPYRVKTTLAGYWNGWLYFTSG 402 (429)
Q Consensus 326 ~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~--~~~~~~~i~~yd~~~~~W~~v~~lp~~r~~~~~~~~~~~i~v~GG 402 (429)
|.+|..++ +++++++|||+||.+.....+. ....++++++||+++++|+.+ ++.+|..+++++++++||++..
T Consensus 231 p~~r~~~~--~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~~~~~~~~~~~l~v~~~ 305 (315)
T 4asc_A 231 PQERSSLS--LVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV--LREIAYAAGATFLPVRLNVLRL 305 (315)
T ss_dssp SSCCBSCE--EEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE--ESCSSCCSSCEEEEEEECGGGS
T ss_pred CCccccee--EEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh--ccCCcCccceEEeCCEEEEEEe
Confidence 99998764 4788999999999864321111 112578999999999999999 7788999999999999999965
No 6
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=4.2e-46 Score=349.76 Aligned_cols=274 Identities=18% Similarity=0.302 Sum_probs=225.6
Q ss_pred CCCCCccCCcEEEECCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEeCCEEEEEeCee---CC
Q 014195 107 AAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQY---GP 183 (429)
Q Consensus 107 ~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~---~~ 183 (429)
+-|.+|..|+++.++++||++||.+ ....+++++||+.+++|+.++++|. +|.+|+++..+++||++||.. ..
T Consensus 10 ~~~~~~~~~~~~~~~~~i~v~GG~~--~~~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~~~~~lyv~GG~~~~~~~ 85 (308)
T 1zgk_A 10 SSGLVPRGSHAPKVGRLIYTAGGYF--RQSLSYLEAYNPSNGTWLRLADLQV--PRSGLAGCVVGGLLYAVGGRNNSPDG 85 (308)
T ss_dssp -----------CCCCCCEEEECCBS--SSBCCCEEEEETTTTEEEECCCCSS--CCBSCEEEEETTEEEEECCEEEETTE
T ss_pred cCCeeeCCccccCCCCEEEEEeCcC--CCCcceEEEEcCCCCeEeECCCCCc--ccccceEEEECCEEEEECCCcCCCCC
Confidence 4467799999999999999999983 3346789999999999999998887 788999999999999999984 21
Q ss_pred CCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEEECCEEEEEeCCCCCCCCccccceEeeeecCCccccceeeccCCC
Q 014195 184 QCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIP 263 (429)
Q Consensus 184 ~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p 263 (429)
. ...+++++||+.+++|+.+++||.+|..|++++++++|||+||........+++.| |+.+++|+.++++|
T Consensus 86 ~--~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~y-------d~~~~~W~~~~~~p 156 (308)
T 1zgk_A 86 N--TDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERY-------EPERDEWHLVAPML 156 (308)
T ss_dssp E--EECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEE-------ETTTTEEEECCCCS
T ss_pred C--eecceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEE-------CCCCCeEeECCCCC
Confidence 1 12789999999999999999999999999999999999999998765444444333 48999999999999
Q ss_pred CCCCceeEEEeCCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCCCCCCCCCcceeEEEECCE
Q 014195 264 RGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLVNNS 342 (429)
Q Consensus 264 ~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~~~~r~~~~~~~~~~~~~ 342 (429)
.++..+++++++++|||+||.+... ..++++.|| .+++|+.++++|.+|..+. +++++++
T Consensus 157 ~~r~~~~~~~~~~~iyv~GG~~~~~-----------------~~~~~~~yd~~~~~W~~~~~~p~~r~~~~--~~~~~~~ 217 (308)
T 1zgk_A 157 TRRIGVGVAVLNRLLYAVGGFDGTN-----------------RLNSAECYYPERNEWRMITAMNTIRSGAG--VCVLHNC 217 (308)
T ss_dssp SCCBSCEEEEETTEEEEECCBCSSC-----------------BCCCEEEEETTTTEEEECCCCSSCCBSCE--EEEETTE
T ss_pred ccccceEEEEECCEEEEEeCCCCCC-----------------cCceEEEEeCCCCeEeeCCCCCCccccce--EEEECCE
Confidence 9999999999999999999986442 256799999 9999999999999998764 4788999
Q ss_pred EEEEcccCCCCCCccceeeeCcEEEEecCCCCeEEecccCcceeeeeeEEECCEEEEEcccCCCCCCCCCCccccccEEe
Q 014195 343 IVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIGKLPYRVKTTLAGYWNGWLYFTSGQRDKGPDDPAPRKVHGDMWR 422 (429)
Q Consensus 343 i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v~~lp~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~d~w~ 422 (429)
|||+||.+... .++++++||+++++|+.++++|.+|..++++.++++||++||... ...++|+|+
T Consensus 218 iyv~GG~~~~~-------~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~--------~~~~~~v~~ 282 (308)
T 1zgk_A 218 IYAAGGYDGQD-------QLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDG--------HTFLDSVEC 282 (308)
T ss_dssp EEEECCBCSSS-------BCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCS--------SCBCCEEEE
T ss_pred EEEEeCCCCCC-------ccceEEEEeCCCCcEEECCCCCCCccceEEEEECCEEEEEcCcCC--------CcccceEEE
Confidence 99999998654 477999999999999999999999999999999999999999754 123467777
Q ss_pred eeeec
Q 014195 423 TKLLL 427 (429)
Q Consensus 423 ~~~~~ 427 (429)
+++..
T Consensus 283 yd~~~ 287 (308)
T 1zgk_A 283 YDPDT 287 (308)
T ss_dssp EETTT
T ss_pred EcCCC
Confidence 77653
No 7
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=7.8e-46 Score=349.53 Aligned_cols=277 Identities=20% Similarity=0.307 Sum_probs=226.3
Q ss_pred cccccCCCeEEccCC--CCCccCCcEEEECCEEEEEeccCC--C---CceeeeEEEEECCCCceeeCCCCCCCCccceee
Q 014195 94 DLPAPELKWEKMKAA--PVPRLDGAAIQIKNLLYVFAGYGS--I---DYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLG 166 (429)
Q Consensus 94 ~~d~~~~~W~~~~~~--p~~R~~~~~~~~~~~iyv~GG~~~--~---~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~ 166 (429)
.||+.+++|.. .++ |.+|.+|+++.++++|||+||... . ....+++++||+.+++|+.++++|. +|..|+
T Consensus 28 ~yd~~~~~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~ 104 (318)
T 2woz_A 28 AYDPMENECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPS--ARCLFG 104 (318)
T ss_dssp EEETTTTEEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSS--CBCSCE
T ss_pred EECCCCCceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCc--cccccc
Confidence 44557778877 344 468999999999999999999632 1 1234569999999999999999987 788999
Q ss_pred EEEeCCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEEECCEEEEEeCCCC-CCCCccccceEee
Q 014195 167 MVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGE-NRYTPEVDHWSLA 245 (429)
Q Consensus 167 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~-~~~~~~~~~~~~~ 245 (429)
+++++++|||+||..... ....+++++||+.+++|+.++++|.+|..|++++++++|||+||... .....++..
T Consensus 105 ~~~~~~~iyv~GG~~~~~-~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~---- 179 (318)
T 2woz_A 105 LGEVDDKIYVVAGKDLQT-EASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFI---- 179 (318)
T ss_dssp EEEETTEEEEEEEEBTTT-CCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEE----
T ss_pred eEEECCEEEEEcCccCCC-CcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEE----
Confidence 999999999999986422 12378999999999999999999999999999999999999999743 222333333
Q ss_pred eecCCccccceeeccCCCCCCCceeEEEeCCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCC
Q 014195 246 VKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPS 324 (429)
Q Consensus 246 ~~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~ 324 (429)
||+.+++|+.++++|.++..|++++++++|||+||.+... ..++++.|| .+++|+.+++
T Consensus 180 ---yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-----------------~~~~~~~yd~~~~~W~~~~~ 239 (318)
T 2woz_A 180 ---YNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDG-----------------LSASVEAFDLKTNKWEVMTE 239 (318)
T ss_dssp ---EETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTE-----------------EEEEEEEEETTTCCEEECCC
T ss_pred ---EcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCC-----------------ccceEEEEECCCCeEEECCC
Confidence 3499999999999999999999999999999999986431 466899999 9999999999
Q ss_pred CCCCCCCcceeEEEECCEEEEEcccCCCCCCcc--ceeeeCcEEEEecCCCCeEEecccCcceeeeeeEEECCEEEEEcc
Q 014195 325 MPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTK--KMVLVGEIFQFNLNTLKWHVIGKLPYRVKTTLAGYWNGWLYFTSG 402 (429)
Q Consensus 325 ~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~--~~~~~~~i~~yd~~~~~W~~v~~lp~~r~~~~~~~~~~~i~v~GG 402 (429)
+|.+|..+ ++++++++|||+||.+....... .....+++|+||+++++|+.+ +|.+|..|+++.++++||++.-
T Consensus 240 ~p~~r~~~--~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~~~~~~~~~~~iyi~~~ 315 (318)
T 2woz_A 240 FPQERSSI--SLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--LKEIRYASGASCLATRLNLFKL 315 (318)
T ss_dssp CSSCCBSC--EEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--ESCCGGGTTCEEEEEEEEGGGC
T ss_pred CCCcccce--EEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--cccccccccceeeCCEEEEEEe
Confidence 99998865 45889999999999876421111 011467999999999999999 8899999999999999999843
No 8
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=4.4e-45 Score=349.99 Aligned_cols=294 Identities=18% Similarity=0.231 Sum_probs=229.2
Q ss_pred EccCCCCCccCCcEEEECCEEEEEeccCCCCceeeeEEEEECC--CCceeeCCCCC-CCCccceeeEEEeCCEEEEEeCe
Q 014195 104 KMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFT--DNTWGGRFDMP-REMAHSHLGMVTDGRYIYVVTGQ 180 (429)
Q Consensus 104 ~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~--~~~W~~~~~~~-~~~~r~~~~~~~~~~~lyv~GG~ 180 (429)
.+++||.+|.+|++++++++|||+||.+. +++++||+. +++|+.+++|| . +|.+|++++++++|||+||.
T Consensus 2 ~l~~lP~~r~~~~~~~~~~~iyv~GG~~~-----~~~~~~d~~~~~~~W~~~~~~p~~--~R~~~~~~~~~~~lyv~GG~ 74 (357)
T 2uvk_A 2 VLPETPVPFKSGTGAIDNDTVYIGLGSAG-----TAWYKLDTQAKDKKWTALAAFPGG--PRDQATSAFIDGNLYVFGGI 74 (357)
T ss_dssp CSCCCSSCCCSCEEEEETTEEEEECGGGT-----TCEEEEETTSSSCCEEECCCCTTC--CCBSCEEEEETTEEEEECCE
T ss_pred CCCCCCccccceEEEEECCEEEEEeCcCC-----CeEEEEccccCCCCeeECCCCCCC--cCccceEEEECCEEEEEcCC
Confidence 47889999999999999999999999864 359999998 49999999998 5 78999999999999999998
Q ss_pred -e-CCCCCCCCceeEEEeCCCCceEeCCCCC-CCCCCceEEEECCEEEEEeCCCCCCCCc----------c---------
Q 014195 181 -Y-GPQCRGPTAHTFVLDTETKKWQDLPPLP-VPRYAPATQLWRGRLHVMGGSGENRYTP----------E--------- 238 (429)
Q Consensus 181 -~-~~~~~~~~~~~~~yd~~t~~W~~~~~~p-~~r~~~~~~~~~~~lyv~GG~~~~~~~~----------~--------- 238 (429)
+ .......++++++||+.+++|+.+++|+ .+|..|++++++++|||+||.+...+.. .
T Consensus 75 ~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (357)
T 2uvk_A 75 GKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINA 154 (357)
T ss_dssp EECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhh
Confidence 3 1211223789999999999999999988 9999999999999999999986432000 0
Q ss_pred --------ccceEeeeecCCccccceeeccCCCCCCCc-eeEEEeCCEEEEEcccCCCCCCCCCCCccccccCCeeeeCc
Q 014195 239 --------VDHWSLAVKDGKPLEKEWRTEIPIPRGGPH-RACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDD 309 (429)
Q Consensus 239 --------~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (429)
...+.-.++.||+.+++|+.++++|..+.. +++++++++|||+||..... ...++
T Consensus 155 ~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~----------------~~~~~ 218 (357)
T 2uvk_A 155 HYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPG----------------LRTDA 218 (357)
T ss_dssp HHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETT----------------EECCC
T ss_pred hhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCC----------------cccCc
Confidence 001122344556999999999999876544 89999999999999975321 14566
Q ss_pred eEEe--C-CCCCeEEcCCCCCCCCCcceeEEEECCEEEEEcccCCCCCC----------ccceeeeCcEEEEecCCCCeE
Q 014195 310 VYML--D-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPT----------TKKMVLVGEIFQFNLNTLKWH 376 (429)
Q Consensus 310 v~~~--d-~~~~W~~~~~~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~----------~~~~~~~~~i~~yd~~~~~W~ 376 (429)
++.| | .+++|+.+++++.||.++.+++++++++|||+||.+..... ......++++++||+++++|+
T Consensus 219 v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~ 298 (357)
T 2uvk_A 219 VFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWD 298 (357)
T ss_dssp EEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CE
T ss_pred eEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCcee
Confidence 7666 4 68899999999999888777789999999999997643210 000013468999999999999
Q ss_pred EecccCcceeeeeeEEECCEEEEEcccCCCCCCCCCCccccccEEeeeeec
Q 014195 377 VIGKLPYRVKTTLAGYWNGWLYFTSGQRDKGPDDPAPRKVHGDMWRTKLLL 427 (429)
Q Consensus 377 ~v~~lp~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~d~w~~~~~~ 427 (429)
.++++|.+|..|+++.++++|||+||.+..+ ..++|+|++++.-
T Consensus 299 ~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~-------~~~~~v~~l~~~~ 342 (357)
T 2uvk_A 299 KSGELSQGRAYGVSLPWNNSLLIIGGETAGG-------KAVTDSVLITVKD 342 (357)
T ss_dssp EEEECSSCCBSSEEEEETTEEEEEEEECGGG-------CEEEEEEEEEC-C
T ss_pred eCCCCCCCcccceeEEeCCEEEEEeeeCCCC-------CEeeeEEEEEEcC
Confidence 9999999999999999999999999976532 2358899887753
No 9
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.8e-44 Score=337.61 Aligned_cols=264 Identities=17% Similarity=0.267 Sum_probs=222.7
Q ss_pred EEEECCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCCceeEEEe
Q 014195 117 AIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLD 196 (429)
Q Consensus 117 ~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd 196 (429)
.+.+++.||++||.+.. ..+++++||+.+++|+.++++|. +|.+|+++..+++||++||.++... .+++++||
T Consensus 11 ~~~~~~~i~v~GG~~~~--~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~~~~~lyv~GG~~~~~~---~~~~~~~d 83 (302)
T 2xn4_A 11 PMNLPKLMVVVGGQAPK--AIRSVECYDFKEERWHQVAELPS--RRCRAGMVYMAGLVFAVGGFNGSLR---VRTVDSYD 83 (302)
T ss_dssp ----CEEEEEECCBSSS--BCCCEEEEETTTTEEEEECCCSS--CCBSCEEEEETTEEEEESCBCSSSB---CCCEEEEE
T ss_pred ccCCCCEEEEECCCCCC--CCCcEEEEcCcCCcEeEcccCCc--ccccceEEEECCEEEEEeCcCCCcc---ccceEEEC
Confidence 44568899999998653 35779999999999999998887 7889999999999999999876543 78999999
Q ss_pred CCCCceEeCCCCCCCCCCceEEEECCEEEEEeCCCCCCCCccccceEeeeecCCccccceeeccCCCCCCCceeEEEeCC
Q 014195 197 TETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDD 276 (429)
Q Consensus 197 ~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~ 276 (429)
+.+++|+.+++||.+|..|++++++++|||+||.+......+ ++.||+.+++|+.++++|.++..++++++++
T Consensus 84 ~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~-------~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~ 156 (302)
T 2xn4_A 84 PVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSS-------VEAYNIKSNEWFHVAPMNTRRSSVGVGVVGG 156 (302)
T ss_dssp TTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEE-------EEEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred CCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCce-------EEEEeCCCCeEeecCCCCCcccCceEEEECC
Confidence 999999999999999999999999999999999875443333 3344599999999999999999999999999
Q ss_pred EEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCCCCCCCCCcceeEEEECCEEEEEcccCCCCCC
Q 014195 277 RLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPT 355 (429)
Q Consensus 277 ~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~ 355 (429)
+||++||.+... ....++++.|| .+++|+.++++|.+|..+ ++++++++|||+||.+...
T Consensus 157 ~iyv~GG~~~~~---------------~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~--~~~~~~~~iyv~GG~~~~~-- 217 (302)
T 2xn4_A 157 LLYAVGGYDVAS---------------RQCLSTVECYNATTNEWTYIAEMSTRRSGA--GVGVLNNLLYAVGGHDGPL-- 217 (302)
T ss_dssp EEEEECCEETTT---------------TEECCCEEEEETTTTEEEEECCCSSCCBSC--EEEEETTEEEEECCBSSSS--
T ss_pred EEEEEeCCCCCC---------------CccccEEEEEeCCCCcEEECCCCccccccc--cEEEECCEEEEECCCCCCc--
Confidence 999999986431 12467899999 999999999999998865 4578899999999987654
Q ss_pred ccceeeeCcEEEEecCCCCeEEecccCcceeeeeeEEECCEEEEEcccCCCCCCCCCCccccccEEeeeee
Q 014195 356 TKKMVLVGEIFQFNLNTLKWHVIGKLPYRVKTTLAGYWNGWLYFTSGQRDKGPDDPAPRKVHGDMWRTKLL 426 (429)
Q Consensus 356 ~~~~~~~~~i~~yd~~~~~W~~v~~lp~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~d~w~~~~~ 426 (429)
.++++++||+++++|+.++++|.+|..++++.++++||++||.... ..++++|++++.
T Consensus 218 -----~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~--------~~~~~v~~yd~~ 275 (302)
T 2xn4_A 218 -----VRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGS--------CNLASVEYYNPT 275 (302)
T ss_dssp -----BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSS--------SBCCCEEEEETT
T ss_pred -----ccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCEEEEECCcCCC--------cccccEEEEcCC
Confidence 4679999999999999999999999999999999999999997542 123566666654
No 10
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=4.9e-44 Score=334.51 Aligned_cols=263 Identities=19% Similarity=0.292 Sum_probs=224.9
Q ss_pred EECCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCCceeEEEeCC
Q 014195 119 QIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (429)
Q Consensus 119 ~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~ 198 (429)
.++++||++||........+++++||+.+++|+.++++|. +|.+|+++..+++||++||.++.. ..+++++||+.
T Consensus 12 ~~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~~~~~l~v~GG~~~~~---~~~~~~~~d~~ 86 (301)
T 2vpj_A 12 GANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITR--KRRYVASVSLHDRIYVIGGYDGRS---RLSSVECLDYT 86 (301)
T ss_dssp -CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSS--CCBSCEEEEETTEEEEECCBCSSC---BCCCEEEEETT
T ss_pred cCCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCCh--hhccccEEEECCEEEEEcCCCCCc---cCceEEEEECC
Confidence 3688999999944344557789999999999999998887 788999999999999999987543 27899999999
Q ss_pred CCc---eEeCCCCCCCCCCceEEEECCEEEEEeCCCCCCCCccccceEeeeecCCccccceeeccCCCCCCCceeEEEeC
Q 014195 199 TKK---WQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVD 275 (429)
Q Consensus 199 t~~---W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~~ 275 (429)
+++ |+.++++|.+|..|+++.++++||++||........+++. ||+.+++|+.++++|.++..+++++++
T Consensus 87 ~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~-------~d~~~~~W~~~~~~p~~r~~~~~~~~~ 159 (301)
T 2vpj_A 87 ADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMER-------YDPNIDQWSMLGDMQTAREGAGLVVAS 159 (301)
T ss_dssp CCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEE-------EETTTTEEEEEEECSSCCBSCEEEEET
T ss_pred CCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEE-------EcCCCCeEEECCCCCCCcccceEEEEC
Confidence 999 9999999999999999999999999999876544333333 358999999999999999999999999
Q ss_pred CEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCCCCCCCCCcceeEEEECCEEEEEcccCCCCC
Q 014195 276 DRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHP 354 (429)
Q Consensus 276 ~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~ 354 (429)
++||++||.+... ..++++.|| .+++|+.++++|.+|..+. ++.++++|||+||.+...
T Consensus 160 ~~iyv~GG~~~~~-----------------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~--~~~~~~~i~v~GG~~~~~- 219 (301)
T 2vpj_A 160 GVIYCLGGYDGLN-----------------ILNSVEKYDPHTGHWTNVTPMATKRSGAG--VALLNDHIYVVGGFDGTA- 219 (301)
T ss_dssp TEEEEECCBCSSC-----------------BCCCEEEEETTTTEEEEECCCSSCCBSCE--EEEETTEEEEECCBCSSS-
T ss_pred CEEEEECCCCCCc-----------------ccceEEEEeCCCCcEEeCCCCCcccccce--EEEECCEEEEEeCCCCCc-
Confidence 9999999986432 467899999 8999999999999998654 578899999999998654
Q ss_pred CccceeeeCcEEEEecCCCCeEEecccCcceeeeeeEEECCEEEEEcccCCCCCCCCCCccccccEEeeeeec
Q 014195 355 TTKKMVLVGEIFQFNLNTLKWHVIGKLPYRVKTTLAGYWNGWLYFTSGQRDKGPDDPAPRKVHGDMWRTKLLL 427 (429)
Q Consensus 355 ~~~~~~~~~~i~~yd~~~~~W~~v~~lp~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~d~w~~~~~~ 427 (429)
.++++++||+++++|+.++++|.+|..|+++.++++||++||.... ..++++|++++..
T Consensus 220 ------~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~--------~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 220 ------HLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGN--------SLLSSIECYDPII 278 (301)
T ss_dssp ------BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSS--------SBEEEEEEEETTT
T ss_pred ------ccceEEEEeCCCCcEEECCCCCCcccceeEEEECCEEEEEcCcCCC--------cccccEEEEcCCC
Confidence 4679999999999999999999999999999999999999997642 2346777777643
No 11
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=8.1e-44 Score=333.87 Aligned_cols=260 Identities=17% Similarity=0.250 Sum_probs=222.1
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCCceeEEEeCCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 200 (429)
.+.||++||.+. .+++++||+.+++|+.++++|. +|.+|+++.++++||++||.+ .. ..+++++||+.++
T Consensus 11 ~~~l~~~GG~~~----~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~~~~~lyv~GG~~-~~---~~~~~~~~d~~~~ 80 (306)
T 3ii7_A 11 HDYRIALFGGSQ----PQSCRYFNPKDYSWTDIRCPFE--KRRDAACVFWDNVVYILGGSQ-LF---PIKRMDCYNVVKD 80 (306)
T ss_dssp CCEEEEEECCSS----TTSEEEEETTTTEEEECCCCSC--CCBSCEEEEETTEEEEECCBS-SS---BCCEEEEEETTTT
T ss_pred cceEEEEeCCCC----CceEEEecCCCCCEecCCCCCc--ccceeEEEEECCEEEEEeCCC-CC---CcceEEEEeCCCC
Confidence 478999999866 4679999999999999999987 789999999999999999987 22 3789999999999
Q ss_pred ceEeCCCCCCCCCCceEEEECCEEEEEeCCC-CCCCCccccceEeeeecCCccccceeeccCCCCCCCceeEEEeCCEEE
Q 014195 201 KWQDLPPLPVPRYAPATQLWRGRLHVMGGSG-ENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLL 279 (429)
Q Consensus 201 ~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~iy 279 (429)
+|+.++++|.+|..|++++++++|||+||.+ ......+++.| |+.+++|+.++++|.++..|+++.++++||
T Consensus 81 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~-------d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy 153 (306)
T 3ii7_A 81 SWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECY-------DTRTESWHTKPSMLTQRCSHGMVEANGLIY 153 (306)
T ss_dssp EEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEE-------ETTTTEEEEECCCSSCCBSCEEEEETTEEE
T ss_pred eEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEE-------eCCCCceEeCCCCcCCcceeEEEEECCEEE
Confidence 9999999999999999999999999999986 33333333333 489999999999999999999999999999
Q ss_pred EEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCCCCCCCCCcceeEEEECCEEEEEcccCCCCCCccc
Q 014195 280 VIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKK 358 (429)
Q Consensus 280 v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~ 358 (429)
|+||...... .....++++.|| .+++|+.++++|.+|..+. +++++++|||+||.+...
T Consensus 154 v~GG~~~~~~-------------~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~--~~~~~~~i~v~GG~~~~~----- 213 (306)
T 3ii7_A 154 VCGGSLGNNV-------------SGRVLNSCEVYDPATETWTELCPMIEARKNHG--LVFVKDKIFAVGGQNGLG----- 213 (306)
T ss_dssp EECCEESCTT-------------TCEECCCEEEEETTTTEEEEECCCSSCCBSCE--EEEETTEEEEECCEETTE-----
T ss_pred EECCCCCCCC-------------cccccceEEEeCCCCCeEEECCCccchhhcce--EEEECCEEEEEeCCCCCC-----
Confidence 9999864321 112467899999 9999999999999988654 478899999999987653
Q ss_pred eeeeCcEEEEecCCCCeEEecccCcceeeeeeEEECCEEEEEcccCCCCCCCCCCccccccEEeeeeec
Q 014195 359 MVLVGEIFQFNLNTLKWHVIGKLPYRVKTTLAGYWNGWLYFTSGQRDKGPDDPAPRKVHGDMWRTKLLL 427 (429)
Q Consensus 359 ~~~~~~i~~yd~~~~~W~~v~~lp~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~d~w~~~~~~ 427 (429)
.++++++||+++++|+.++++|.+|..++++.++++|||+||....+ .++++|++++..
T Consensus 214 --~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~--------~~~~~~~yd~~~ 272 (306)
T 3ii7_A 214 --GLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAVGSIVYVLAGFQGVG--------RLGHILEYNTET 272 (306)
T ss_dssp --EBCCEEEEETTTTEEEECCCCSCCBSCCEEEEETTEEEEEECBCSSS--------BCCEEEEEETTT
T ss_pred --CCceEEEeeCCCCcEEECCCCCCCccceeEEEECCEEEEEeCcCCCe--------eeeeEEEEcCCC
Confidence 57899999999999999999999999999999999999999976421 346677777653
No 12
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=1.2e-43 Score=340.03 Aligned_cols=303 Identities=17% Similarity=0.142 Sum_probs=220.4
Q ss_pred HHHHHhhcceeeeecCCCcccceeeeeeecCCCCeEEecCCCCCCCcceeeeecCCCCcCcccccccccccccCCCeEEc
Q 014195 26 ILGFALVADFFWASSSKFTSSYLNIASNWSPYHNSIILPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAPELKWEKM 105 (429)
Q Consensus 26 ~~~~~~~~~~ly~~GG~~~~~~~~~~~~yd~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 105 (429)
.|++++++++|||+||.++ +++.+||+ +..+++|+++
T Consensus 12 ~~~~~~~~~~iyv~GG~~~----~~~~~~d~---------------------------------------~~~~~~W~~~ 48 (357)
T 2uvk_A 12 SGTGAIDNDTVYIGLGSAG----TAWYKLDT---------------------------------------QAKDKKWTAL 48 (357)
T ss_dssp SCEEEEETTEEEEECGGGT----TCEEEEET---------------------------------------TSSSCCEEEC
T ss_pred ceEEEEECCEEEEEeCcCC----CeEEEEcc---------------------------------------ccCCCCeeEC
Confidence 3566777999999999654 24555553 1125899999
Q ss_pred cCCC-CCccCCcEEEECCEEEEEecc-C---CCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEeCCEEEEEeCe
Q 014195 106 KAAP-VPRLDGAAIQIKNLLYVFAGY-G---SIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQ 180 (429)
Q Consensus 106 ~~~p-~~R~~~~~~~~~~~iyv~GG~-~---~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~ 180 (429)
++|| .+|.+|++++++++|||+||. + .....++++++||+.+++|+.+++++ |.+|..|++++.+++|||+||.
T Consensus 49 ~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~-p~~r~~~~~~~~~~~iyv~GG~ 127 (357)
T 2uvk_A 49 AAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHA-PMGMAGHVTFVHNGKAYVTGGV 127 (357)
T ss_dssp CCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCC-SSCCSSEEEEEETTEEEEEECC
T ss_pred CCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCC-CcccccceEEEECCEEEEEeCc
Confidence 9999 899999999999999999998 2 23446788999999999999999998 5589999999999999999997
Q ss_pred eCCC-------------------------------CCCCCceeEEEeCCCCceEeCCCCCCCCCC-ceEEEECCEEEEEe
Q 014195 181 YGPQ-------------------------------CRGPTAHTFVLDTETKKWQDLPPLPVPRYA-PATQLWRGRLHVMG 228 (429)
Q Consensus 181 ~~~~-------------------------------~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~-~~~~~~~~~lyv~G 228 (429)
+... ....++++++||+.+++|+.++++|.+|.. |++++++++|||+|
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~G 207 (357)
T 2uvk_A 128 NQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLIN 207 (357)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEEC
T ss_pred CCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEe
Confidence 5431 001268999999999999999999977655 99999999999999
Q ss_pred CCCCCCCCccccceEeeeecCCccccceeeccCC--CCCCCceeEEEeCCEEEEEcccCCCCCCCCCCCccccccCCeee
Q 014195 229 GSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPI--PRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVV 306 (429)
Q Consensus 229 G~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~--p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 306 (429)
|..... ....+.|. +++|+.+++|+.++++ |+.+..+++++++++|||+||.+.....+......-........
T Consensus 208 G~~~~~-~~~~~v~~---~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~ 283 (357)
T 2uvk_A 208 GEAKPG-LRTDAVFE---LDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKK 283 (357)
T ss_dssp CEEETT-EECCCEEE---EECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCC
T ss_pred eecCCC-cccCceEE---EEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccc
Confidence 975432 11223332 3335799999998877 45566778999999999999975321000000000000000112
Q ss_pred eCceEEeC-CCCCeEEcCCCCCCCCCcceeEEEECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEEecccCcc
Q 014195 307 YDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIGKLPYR 384 (429)
Q Consensus 307 ~~~v~~~d-~~~~W~~~~~~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v~~lp~~ 384 (429)
.++++.|| .+++|+.++++|.+|..+. ++.++++|||+||.+.... .++++++|+.++++|.+..++|..
T Consensus 284 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~--~~~~~~~i~v~GG~~~~~~------~~~~v~~l~~~~~~~~~~~~~~~~ 354 (357)
T 2uvk_A 284 SYSTDIHLWHNGKWDKSGELSQGRAYGV--SLPWNNSLLIIGGETAGGK------AVTDSVLITVKDNKVTVQNLEHHH 354 (357)
T ss_dssp EECCEEEECC---CEEEEECSSCCBSSE--EEEETTEEEEEEEECGGGC------EEEEEEEEEC-CCSCEEEC-----
T ss_pred eeeEEEEecCCCceeeCCCCCCCcccce--eEEeCCEEEEEeeeCCCCC------EeeeEEEEEEcCcEeEeeeccccc
Confidence 45689999 8999999999999998754 4789999999999987654 578999999999999998777653
No 13
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=5.7e-43 Score=329.50 Aligned_cols=265 Identities=20% Similarity=0.308 Sum_probs=219.2
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEeCCEEEEEeCeeCC---CCCCCCceeEEEeC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGP---QCRGPTAHTFVLDT 197 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~---~~~~~~~~~~~yd~ 197 (429)
++.||++|| +++++||+.+++|+. +++|.|.+|.+|++++.+++||++||.... ......+++++||+
T Consensus 4 ~~~l~~~GG--------~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~ 74 (315)
T 4asc_A 4 QDLIFMISE--------EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDH 74 (315)
T ss_dssp EEEEEEEET--------TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEET
T ss_pred ceEEEEEcC--------CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecC
Confidence 467999999 469999999999987 778777789999999999999999997321 11112456999999
Q ss_pred CCCceEeCCCCCCCCCCceEEEECCEEEEEeCCCC---CCCCccccceEeeeecCCccccceeeccCCCCCCCceeEEEe
Q 014195 198 ETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGE---NRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVV 274 (429)
Q Consensus 198 ~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~---~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~ 274 (429)
.+++|+.+++||.+|..|+++.++++|||+||.+. .....++.+ ||+.+++|+.++++|.++..|+++++
T Consensus 75 ~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~-------~d~~~~~W~~~~~~p~~r~~~~~~~~ 147 (315)
T 4asc_A 75 LDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMC-------YDRLSFKWGESDPLPYVVYGHTVLSH 147 (315)
T ss_dssp TTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEE-------EETTTTEEEECCCCSSCCBSCEEEEE
T ss_pred CCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEE-------ECCCCCcEeECCCCCCcccceeEEEE
Confidence 99999999999999999999999999999999742 233333333 34899999999999999999999999
Q ss_pred CCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCCCCCCCCCcceeEEEECCEEEEEcccCCCC
Q 014195 275 DDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKH 353 (429)
Q Consensus 275 ~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~~~~r~~~~~~~~~~~~~i~v~GG~~~~~ 353 (429)
+++|||+||.+... ...++++.|| .+++|+.++++|.+|..+. +++++++|||+||.+...
T Consensus 148 ~~~iyv~GG~~~~~----------------~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~--~~~~~~~iyv~GG~~~~~ 209 (315)
T 4asc_A 148 MDLVYVIGGKGSDR----------------KCLNKMCVYDPKKFEWKELAPMQTARSLFG--ATVHDGRIIVAAGVTDTG 209 (315)
T ss_dssp TTEEEEECCBCTTS----------------CBCCCEEEEETTTTEEEECCCCSSCCBSCE--EEEETTEEEEEEEECSSS
T ss_pred CCEEEEEeCCCCCC----------------cccceEEEEeCCCCeEEECCCCCCchhceE--EEEECCEEEEEeccCCCC
Confidence 99999999984321 1467899999 8999999999999988764 478899999999997664
Q ss_pred CCccceeeeCcEEEEecCCCCeEEecccCcceeeeeeEEECCEEEEEcccCCCCC--CCCCCccccccEEeeeeec
Q 014195 354 PTTKKMVLVGEIFQFNLNTLKWHVIGKLPYRVKTTLAGYWNGWLYFTSGQRDKGP--DDPAPRKVHGDMWRTKLLL 427 (429)
Q Consensus 354 ~~~~~~~~~~~i~~yd~~~~~W~~v~~lp~~r~~~~~~~~~~~i~v~GG~~~~~~--~~~~~~~~~~d~w~~~~~~ 427 (429)
.++++++||+++++|+.++++|.+|..|+++.++++||++||...... .... ...++|+|++++..
T Consensus 210 -------~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~-~~~~~~v~~yd~~~ 277 (315)
T 4asc_A 210 -------LTSSAEVYSITDNKWAPFEAFPQERSSLSLVSLVGTLYAIGGFATLETESGELV-PTELNDIWRYNEEE 277 (315)
T ss_dssp -------EEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEE-EEEEEEEEEEETTT
T ss_pred -------ccceEEEEECCCCeEEECCCCCCcccceeEEEECCEEEEECCccccCcCCcccc-ccccCcEEEecCCC
Confidence 578999999999999999999999999999999999999999764211 1111 13458889888764
No 14
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=5.7e-42 Score=323.10 Aligned_cols=276 Identities=22% Similarity=0.327 Sum_probs=220.4
Q ss_pred CCccCCcEEEECCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEeCCEEEEEeCeeC--CCC-C
Q 014195 110 VPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYG--PQC-R 186 (429)
Q Consensus 110 ~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~--~~~-~ 186 (429)
.+|.++.. .+.||++||. ++++||+.+++|.. .+++.+.+|.+|+++..+++||++||... ... .
T Consensus 7 ~~r~~~~~---~~~i~~~GG~--------~~~~yd~~~~~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~ 74 (318)
T 2woz_A 7 IPRHGMFV---KDLILLVNDT--------AAVAYDPMENECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQ 74 (318)
T ss_dssp SCCCCCSE---EEEEEEECSS--------EEEEEETTTTEEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------
T ss_pred ccccccee---cchhhhcccc--------ceEEECCCCCceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCC
Confidence 45655433 4689999993 38999999999998 56666668999999999999999999632 111 1
Q ss_pred CCCceeEEEeCCCCceEeCCCCCCCCCCceEEEECCEEEEEeCCCCCCCCccccceEeeeecCCccccceeeccCCCCCC
Q 014195 187 GPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGG 266 (429)
Q Consensus 187 ~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~ 266 (429)
...+++++||+.+++|+.+++||.+|..|++++++++|||+||...... ...-.++.||+.+++|+.++++|.++
T Consensus 75 ~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~-----~~~~~~~~yd~~~~~W~~~~~~p~~r 149 (318)
T 2woz_A 75 PLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTE-----ASLDSVLCYDPVAAKWSEVKNLPIKV 149 (318)
T ss_dssp CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTC-----CEEEEEEEEETTTTEEEEECCCSSCE
T ss_pred CccccEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCC-----cccceEEEEeCCCCCEeECCCCCCcc
Confidence 1134699999999999999999999999999999999999999753111 11223444569999999999999999
Q ss_pred CceeEEEeCCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCCCCCCCCCcceeEEEECCEEEE
Q 014195 267 PHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVI 345 (429)
Q Consensus 267 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~~~~r~~~~~~~~~~~~~i~v 345 (429)
.+|++++++++|||+||.+... ...++++.|| .+++|+.++++|.+|..++ +++++++|||
T Consensus 150 ~~~~~~~~~~~iyv~GG~~~~~----------------~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~--~~~~~~~iyv 211 (318)
T 2woz_A 150 YGHNVISHNGMIYCLGGKTDDK----------------KCTNRVFIYNPKKGDWKDLAPMKTPRSMFG--VAIHKGKIVI 211 (318)
T ss_dssp ESCEEEEETTEEEEECCEESSS----------------CBCCCEEEEETTTTEEEEECCCSSCCBSCE--EEEETTEEEE
T ss_pred cccEEEEECCEEEEEcCCCCCC----------------CccceEEEEcCCCCEEEECCCCCCCcccce--EEEECCEEEE
Confidence 9999999999999999975321 1467899999 8999999999999998764 4788999999
Q ss_pred EcccCCCCCCccceeeeCcEEEEecCCCCeEEecccCcceeeeeeEEECCEEEEEcccCCCCCCCCC-CccccccEEeee
Q 014195 346 VGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIGKLPYRVKTTLAGYWNGWLYFTSGQRDKGPDDPA-PRKVHGDMWRTK 424 (429)
Q Consensus 346 ~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v~~lp~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~-~~~~~~d~w~~~ 424 (429)
+||.+... .++++++||+++++|+.++++|.+|..|+++.++++||++||.........+ .....+|+|+++
T Consensus 212 ~GG~~~~~-------~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd 284 (318)
T 2woz_A 212 AGGVTEDG-------LSASVEAFDLKTNKWEVMTEFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYE 284 (318)
T ss_dssp EEEEETTE-------EEEEEEEEETTTCCEEECCCCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEE
T ss_pred EcCcCCCC-------ccceEEEEECCCCeEEECCCCCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEe
Confidence 99987654 5779999999999999999999999999999999999999998653211111 012358899888
Q ss_pred eec
Q 014195 425 LLL 427 (429)
Q Consensus 425 ~~~ 427 (429)
+..
T Consensus 285 ~~~ 287 (318)
T 2woz_A 285 DDK 287 (318)
T ss_dssp TTT
T ss_pred CCC
Confidence 764
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=2.7e-38 Score=326.86 Aligned_cols=285 Identities=12% Similarity=0.112 Sum_probs=220.2
Q ss_pred CeEEccCCCCCccCCcEEEECCEEEEEeccCCCCceeeeEEEEECCCCceeeCC-CCC---CCCccceeeEEEe--CCEE
Q 014195 101 KWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRF-DMP---REMAHSHLGMVTD--GRYI 174 (429)
Q Consensus 101 ~W~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~-~~~---~~~~r~~~~~~~~--~~~l 174 (429)
+|...+..|..|.++ +++++++|||+||.+. ...+++++||+.+++|+.++ ++| .|.+|.+|+++++ +++|
T Consensus 378 ~~~~~~~~p~rr~g~-~~~~~~~iyv~GG~~~--~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~l 454 (695)
T 2zwa_A 378 QLLECECPINRKFGD-VDVAGNDVFYMGGSNP--YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQL 454 (695)
T ss_dssp EEEECCCTTCCBSCE-EEECSSCEEEECCBSS--SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEE
T ss_pred eEeccCCCCCCceeE-EEEECCEEEEECCCCC--CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEE
Confidence 344445556666554 4458999999999877 44678999999999999988 633 3448999999999 9999
Q ss_pred EEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEEE-CCEEEEEeCCCCCCCCccccceEeeeecCCccc
Q 014195 175 YVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW-RGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLE 253 (429)
Q Consensus 175 yv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~ 253 (429)
||+||.+.... .++++|+||+.+++|+.+++||.+|..|+++++ +++|||+||.+... + ++.||+.+
T Consensus 455 yv~GG~~~~~~--~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~-----~-----v~~yd~~t 522 (695)
T 2zwa_A 455 LLIGGRKAPHQ--GLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP-----A-----MLLYNVTE 522 (695)
T ss_dssp EEECCBSSTTC--BCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC-----S-----EEEEETTT
T ss_pred EEEcCCCCCCC--ccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC-----C-----EEEEECCC
Confidence 99999876542 378999999999999999999999999999997 99999999987543 2 33445999
Q ss_pred cceeeccC---CCCCCCceeEEEeC---CEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCC------eE
Q 014195 254 KEWRTEIP---IPRGGPHRACVVVD---DRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMK------WK 320 (429)
Q Consensus 254 ~~W~~~~~---~p~~~~~~~~~~~~---~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~------W~ 320 (429)
++|+.+++ +|.++.+|++++++ ++|||+||..... ....++++.|| .+++ |+
T Consensus 523 ~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~---------------~~~~~~v~~yd~~~~~w~~~~~W~ 587 (695)
T 2zwa_A 523 EIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQ---------------TTVSDKAIIFKYDAENATEPITVI 587 (695)
T ss_dssp TEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTS---------------SCBCCEEEEEEECTTCSSCCEEEE
T ss_pred CceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCC---------------CeeeCcEEEEEccCCccccceEEE
Confidence 99999876 78888888878877 8999999985331 11467899999 8888 89
Q ss_pred EcCCC-CCCCCCcceeEEEEC-CEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEEecccCc--------ceeeeee
Q 014195 321 VLPSM-PKPDSHIEFAWVLVN-NSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIGKLPY--------RVKTTLA 390 (429)
Q Consensus 321 ~~~~~-~~~r~~~~~~~~~~~-~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v~~lp~--------~r~~~~~ 390 (429)
.+.++ +.+|..+ ++++++ ++|||+||.+..... ...+++++||+++++|+.+ ++|. .+..|++
T Consensus 588 ~~~~~p~~~R~~~--~~~~~~~~~iyv~GG~~~~~~~----~~~~~v~~yd~~t~~W~~~-~~p~~~~~~~~p~~~gh~~ 660 (695)
T 2zwa_A 588 KKLQHPLFQRYGS--QIKYITPRKLLIVGGTSPSGLF----DRTNSIISLDPLSETLTSI-PISRRIWEDHSLMLAGFSL 660 (695)
T ss_dssp EEEECGGGCCBSC--EEEEEETTEEEEECCBCSSCCC----CTTTSEEEEETTTTEEEEC-CCCHHHHHHSCCCCSSCEE
T ss_pred EcCCCCCCCcccc--eEEEeCCCEEEEECCccCCCCC----CCCCeEEEEECCCCeEEEe-eccccccCCCCccceeeeE
Confidence 98875 4777765 447778 999999998755421 1367999999999999964 3332 2456777
Q ss_pred EEECC-EEEEEcccCCCCCCCCCCccccccEEeeeee
Q 014195 391 GYWNG-WLYFTSGQRDKGPDDPAPRKVHGDMWRTKLL 426 (429)
Q Consensus 391 ~~~~~-~i~v~GG~~~~~~~~~~~~~~~~d~w~~~~~ 426 (429)
+.+++ +|||+||...- ..-....|++|+++|.
T Consensus 661 ~~~~~g~i~v~GGg~~c----fsfGt~~n~i~~ldl~ 693 (695)
T 2zwa_A 661 VSTSMGTIHIIGGGATC----YGFGSVTNVGLKLIAI 693 (695)
T ss_dssp ECC---CEEEECCEEEC----TTSCEEECCCEEEEEC
T ss_pred EEeCCCEEEEEeCCccC----cCccccccceEEEEEE
Confidence 76666 99999996431 1113445799999986
No 16
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=8.5e-39 Score=330.13 Aligned_cols=287 Identities=11% Similarity=0.040 Sum_probs=211.8
Q ss_pred ccccccccCCCeEEccCCCCCccCCc--EEE-ECCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeE
Q 014195 91 TFQDLPAPELKWEKMKAAPVPRLDGA--AIQ-IKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGM 167 (429)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~R~~~~--~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~ 167 (429)
.+..||+.+++|+.++.||.+|..++ ++. .+++||++||.+.. ++++||+.+++|+.+++|+. +|..|++
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~-----~v~~yd~~t~~W~~~~~~~~--~R~~~s~ 292 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAK-----KTSLYDSSSDSWIPGPDMQV--ARGYQSS 292 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTT-----CEEEEEGGGTEEEECCCCSS--CCSSCEE
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCC-----ceEEecCcCCceeECCCCCc--cccccce
Confidence 45677889999999999998887664 333 58999999997653 59999999999999999988 7889999
Q ss_pred EEe-CCEEEEEeCe-eCCCCCCCCceeEEEeCCCCceEeC-----CCCCCCCCCceEEEECCEEEEEeCCCCCCCCcccc
Q 014195 168 VTD-GRYIYVVTGQ-YGPQCRGPTAHTFVLDTETKKWQDL-----PPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVD 240 (429)
Q Consensus 168 ~~~-~~~lyv~GG~-~~~~~~~~~~~~~~yd~~t~~W~~~-----~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~ 240 (429)
+++ +++|||+||. ++.. ..+++++||+.+++|+.+ .+|+.+|.. +++..++++|++||.++..+...
T Consensus 293 ~~~~dg~iyv~GG~~~~~~---~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~-~~~~~~~~iyv~Gg~~g~~~~~~-- 366 (656)
T 1k3i_A 293 ATMSDGRVFTIGGSWSGGV---FEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ-GLYRSDNHAWLFGWKKGSVFQAG-- 366 (656)
T ss_dssp EECTTSCEEEECCCCCSSS---CCCCEEEEETTTTEEEEETTSCSGGGCCCCTT-GGGTTTCSCCEEECGGGCEEECC--
T ss_pred EEecCCeEEEEeCcccCCc---ccccceEeCCCCCcceeCCCcccccccccccc-ceeecCCceEEEECCCCcEEEec--
Confidence 998 9999999995 4333 278999999999999997 456666553 56668999999999865321000
Q ss_pred ceEeeeecCCccccceeeccCCCCC-------CCceeEEE---eCCEEEEEcccCCCCCCCCCCCccccccCCeeeeCce
Q 014195 241 HWSLAVKDGKPLEKEWRTEIPIPRG-------GPHRACVV---VDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDV 310 (429)
Q Consensus 241 ~~~~~~~~~d~~~~~W~~~~~~p~~-------~~~~~~~~---~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v 310 (429)
....++.||+.+++|......++. +..+++++ .+++|||+||....... .... ...++
T Consensus 367 -~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~-------~~~~----~~~~v 434 (656)
T 1k3i_A 367 -PSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDS-------DATT----NAHII 434 (656)
T ss_dssp -SSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSS-------BCCC----CEEEE
T ss_pred -CccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCC-------CcCC----cceEE
Confidence 011234445889998764322211 22234443 58999999997532100 0000 11258
Q ss_pred EEeC-CCCCeEEcC--CCCCCCCCcceeEEEE-CCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEEecccCccee
Q 014195 311 YMLD-DEMKWKVLP--SMPKPDSHIEFAWVLV-NNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIGKLPYRVK 386 (429)
Q Consensus 311 ~~~d-~~~~W~~~~--~~~~~r~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v~~lp~~r~ 386 (429)
+.|| .+++|+.+. +||.+|..+.+ +++ +++|||+||.+...... ....++++++||+++++|+.+++++.+|.
T Consensus 435 ~~yd~~~~~W~~~~~~~mp~~R~~~~~--~~l~~g~i~v~GG~~~~~~~~-~~~~~~~v~~ydp~t~~W~~~~~~~~~R~ 511 (656)
T 1k3i_A 435 TLGEPGTSPNTVFASNGLYFARTFHTS--VVLPDGSTFITGGQRRGIPFE-DSTPVFTPEIYVPEQDTFYKQNPNSIVRV 511 (656)
T ss_dssp ECCSTTSCCEEEECTTCCSSCCBSCEE--EECTTSCEEEECCBSBCCTTC-CCSBCCCCEEEEGGGTEEEECCCCSSCCC
T ss_pred EcCCCCCCCeeEEccCCCCCCcccCCe--EECCCCCEEEECCcccCcCcC-CCCcccceEEEcCCCCceeecCCCCCccc
Confidence 8999 899999987 89999987643 555 99999999976432111 11156799999999999999999999999
Q ss_pred eeeeEEE--CCEEEEEcccCC
Q 014195 387 TTLAGYW--NGWLYFTSGQRD 405 (429)
Q Consensus 387 ~~~~~~~--~~~i~v~GG~~~ 405 (429)
.|+++++ +++||++||...
T Consensus 512 ~hs~a~ll~dg~v~v~GG~~~ 532 (656)
T 1k3i_A 512 YHSISLLLPDGRVFNGGGGLC 532 (656)
T ss_dssp TTEEEEECTTSCEEEEECCCC
T ss_pred cccHhhcCCCcEEEecCCCCC
Confidence 9988877 999999999643
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=1.7e-36 Score=313.45 Aligned_cols=269 Identities=12% Similarity=0.089 Sum_probs=206.7
Q ss_pred HHHhhcceeeeecCCCcccceeeeeeecCCCCeEEecCCCCCCCcceeeeecCCCCcCcccccccccccccCCCeEEcc-
Q 014195 28 GFALVADFFWASSSKFTSSYLNIASNWSPYHNSIILPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAPELKWEKMK- 106 (429)
Q Consensus 28 ~~~~~~~~ly~~GG~~~~~~~~~~~~yd~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~- 106 (429)
+++++++.||++||.++ ..++++++|| +.+++|+.++
T Consensus 392 ~~~~~~~~iyv~GG~~~-~~~~~v~~yd-----------------------------------------~~~~~W~~~~~ 429 (695)
T 2zwa_A 392 DVDVAGNDVFYMGGSNP-YRVNEILQLS-----------------------------------------IHYDKIDMKNI 429 (695)
T ss_dssp EEEECSSCEEEECCBSS-SBCCCEEEEE-----------------------------------------ECSSCEEEEEC
T ss_pred EEEEECCEEEEECCCCC-CCcCcEEEEE-----------------------------------------CCCCeEEEecc
Confidence 44458999999999766 5555555555 5677888877
Q ss_pred C-----CCCCccCCcEEEE--CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEe
Q 014195 107 A-----APVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVT 178 (429)
Q Consensus 107 ~-----~p~~R~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~G 178 (429)
+ +|.+|.+|+++++ +++|||+||.+.....++++|+||+.+++|+.++++|. +|..|+++++ +++|||+|
T Consensus 430 ~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~--~R~~h~~~~~~~~~iyv~G 507 (695)
T 2zwa_A 430 EVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSH--TRFRHSACSLPDGNVLILG 507 (695)
T ss_dssp CCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSB--CCBSCEEEECTTSCEEEEC
T ss_pred CCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCC--CcccceEEEEcCCEEEEEC
Confidence 5 7899999999999 99999999998766567889999999999999999987 7899999996 99999999
Q ss_pred CeeCCCCCCCCceeEEEeCCCCceEeCCC---CCCCCCCceEEEEC---CEEEEEeCCCCC--CCCccccceEeeeecCC
Q 014195 179 GQYGPQCRGPTAHTFVLDTETKKWQDLPP---LPVPRYAPATQLWR---GRLHVMGGSGEN--RYTPEVDHWSLAVKDGK 250 (429)
Q Consensus 179 G~~~~~~~~~~~~~~~yd~~t~~W~~~~~---~p~~r~~~~~~~~~---~~lyv~GG~~~~--~~~~~~~~~~~~~~~~d 250 (429)
|.+... ++++||+.+++|+.+++ +|.+|..|++++++ ++|||+||.... ....++.. ||
T Consensus 508 G~~~~~------~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~-------yd 574 (695)
T 2zwa_A 508 GVTEGP------AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAII-------FK 574 (695)
T ss_dssp CBCSSC------SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEE-------EE
T ss_pred CCCCCC------CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEE-------EE
Confidence 986533 89999999999999986 89999999988877 899999998543 22333333 34
Q ss_pred ccccc------eeeccCC-CCCCCceeEEEeC-CEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEE
Q 014195 251 PLEKE------WRTEIPI-PRGGPHRACVVVD-DRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKV 321 (429)
Q Consensus 251 ~~~~~------W~~~~~~-p~~~~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~ 321 (429)
+.+++ |+.+.++ +.+|.+|++++++ ++|||+||.+.... ....++++.|| .+++|+.
T Consensus 575 ~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~--------------~~~~~~v~~yd~~t~~W~~ 640 (695)
T 2zwa_A 575 YDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGL--------------FDRTNSIISLDPLSETLTS 640 (695)
T ss_dssp ECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCC--------------CCTTTSEEEEETTTTEEEE
T ss_pred ccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCC--------------CCCCCeEEEEECCCCeEEE
Confidence 78888 8887665 4677778999999 99999999864321 01356799999 9999996
Q ss_pred cCCCCC-------CCCCcceeEEEECC-EEEEEcccCCCCCCccceeeeCcEEEEecCC
Q 014195 322 LPSMPK-------PDSHIEFAWVLVNN-SIVIVGGTTEKHPTTKKMVLVGEIFQFNLNT 372 (429)
Q Consensus 322 ~~~~~~-------~r~~~~~~~~~~~~-~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~ 372 (429)
+. +|. | ...+++++.+++ +|||+||....-.+ .++.+++|.+|...
T Consensus 641 ~~-~p~~~~~~~~p-~~~gh~~~~~~~g~i~v~GGg~~cfsf---Gt~~n~i~~ldl~~ 694 (695)
T 2zwa_A 641 IP-ISRRIWEDHSL-MLAGFSLVSTSMGTIHIIGGGATCYGF---GSVTNVGLKLIAIA 694 (695)
T ss_dssp CC-CCHHHHHHSCC-CCSSCEEECC---CEEEECCEEECTTS---CEEECCCEEEEECC
T ss_pred ee-ccccccCCCCc-cceeeeEEEeCCCEEEEEeCCccCcCc---cccccceEEEEEEc
Confidence 54 221 2 222344466565 99999996432211 12677999998764
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=1.4e-34 Score=298.69 Aligned_cols=281 Identities=16% Similarity=0.185 Sum_probs=209.7
Q ss_pred ccccccccCCCeEEccCCCCCccCCcEEEE--CCEEEEEeccCCCC-----ceeeeEEEEECCCCceeeCCCCCCCCccc
Q 014195 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSID-----YVHSHVDIYNFTDNTWGGRFDMPREMAHS 163 (429)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~R~~~~~~~~--~~~iyv~GG~~~~~-----~~~~~~~~yd~~~~~W~~~~~~~~~~~r~ 163 (429)
.+..||+.+++|+.++++|. ..++++++ +++||++||.+... ...+++++||+.+++|+.++.++.++.+.
T Consensus 167 ~~~~~dp~~~~W~~~~~~P~--~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~ 244 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTIDLPI--VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMF 244 (656)
T ss_dssp CCCCCCTTSCEEEEEEECSS--CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCS
T ss_pred ccccCCCCCCeeeeeccCCC--CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCc
Confidence 36689999999999988765 55666666 89999999986532 13457999999999999998887743333
Q ss_pred eeeEE-EeCCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEEE-CCEEEEEeCC-CCCCCCcccc
Q 014195 164 HLGMV-TDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW-RGRLHVMGGS-GENRYTPEVD 240 (429)
Q Consensus 164 ~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~-~~~~~~~~~~ 240 (429)
.++++ ..+++||++||.+. .++++||+.+++|+.+++|+.+|..|+++++ +++|||+||. ++.....+.+
T Consensus 245 ~~~~~~~~~g~lyv~GG~~~-------~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e 317 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDA-------KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGE 317 (656)
T ss_dssp SCEEEECTTSCEEEECSSST-------TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEE
T ss_pred cccccCCCCCCEEEeCCCCC-------CceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccce
Confidence 33444 46899999999653 3799999999999999999999999999999 9999999994 4444444444
Q ss_pred ceEeeeecCCccccceeec-----cCCCCCCCceeEEEeCCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-
Q 014195 241 HWSLAVKDGKPLEKEWRTE-----IPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD- 314 (429)
Q Consensus 241 ~~~~~~~~~d~~~~~W~~~-----~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d- 314 (429)
+| |+.+++|+.+ .|++..+.. +++..+++||++||.++.... ....++++.||
T Consensus 318 ~y-------d~~t~~W~~~~~~~~~p~~~~~~~-~~~~~~~~iyv~Gg~~g~~~~-------------~~~~~~v~~yd~ 376 (656)
T 1k3i_A 318 VY-------SPSSKTWTSLPNAKVNPMLTADKQ-GLYRSDNHAWLFGWKKGSVFQ-------------AGPSTAMNWYYT 376 (656)
T ss_dssp EE-------ETTTTEEEEETTSCSGGGCCCCTT-GGGTTTCSCCEEECGGGCEEE-------------CCSSSEEEEEEC
T ss_pred Ee-------CCCCCcceeCCCcccccccccccc-ceeecCCceEEEECCCCcEEE-------------ecCccceeeeec
Confidence 44 4899999986 567777653 666689999999998643100 00245789999
Q ss_pred CCCCeEEcCC-CCC-----CCCCcceeEE--EECCEEEEEcccCCCCCCccceeeeC---cEEEEecCCCCeEEec--cc
Q 014195 315 DEMKWKVLPS-MPK-----PDSHIEFAWV--LVNNSIVIVGGTTEKHPTTKKMVLVG---EIFQFNLNTLKWHVIG--KL 381 (429)
Q Consensus 315 ~~~~W~~~~~-~~~-----~r~~~~~~~~--~~~~~i~v~GG~~~~~~~~~~~~~~~---~i~~yd~~~~~W~~v~--~l 381 (429)
.++.|..... .+. +....+.+++ ..+++||++||.+...... .++ ++++||+++++|+.+. .|
T Consensus 377 ~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~----~~~~~~~v~~yd~~~~~W~~~~~~~m 452 (656)
T 1k3i_A 377 SGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSD----ATTNAHIITLGEPGTSPNTVFASNGL 452 (656)
T ss_dssp STTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSB----CCCCEEEEECCSTTSCCEEEECTTCC
T ss_pred CCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCC----cCCcceEEEcCCCCCCCeeEEccCCC
Confidence 8888875432 221 1112222222 2589999999975422110 234 7999999999999986 99
Q ss_pred CcceeeeeeEEE-CCEEEEEcccCC
Q 014195 382 PYRVKTTLAGYW-NGWLYFTSGQRD 405 (429)
Q Consensus 382 p~~r~~~~~~~~-~~~i~v~GG~~~ 405 (429)
|.+|..|+++.+ +++|||+||...
T Consensus 453 p~~R~~~~~~~l~~g~i~v~GG~~~ 477 (656)
T 1k3i_A 453 YFARTFHTSVVLPDGSTFITGGQRR 477 (656)
T ss_dssp SSCCBSCEEEECTTSCEEEECCBSB
T ss_pred CCCcccCCeEECCCCCEEEECCccc
Confidence 999999998877 999999999764
No 19
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.38 E-value=0.00079 Score=63.52 Aligned_cols=289 Identities=15% Similarity=0.154 Sum_probs=148.7
Q ss_pred HHhhcceeeeecCCCcccceeeeeeecCCCCe--EEecCCCC-------CCCcceee-eecCCCCcCccccccccccccc
Q 014195 29 FALVADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGP-------QKGENIGV-KTKKDVVPKRILPATFQDLPAP 98 (429)
Q Consensus 29 ~~~~~~~ly~~GG~~~~~~~~~~~~yd~~~~~--~~~p~~~~-------r~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~ 98 (429)
-++.++.||+... + ..+.+||+++.+ ........ ........ ......... .....+..+|..
T Consensus 49 p~v~~~~v~~~~~-~-----g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~-~~~g~l~a~d~~ 121 (376)
T 3q7m_A 49 PALADNVVYAADR-A-----GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIG-SEKAQVYALNTS 121 (376)
T ss_dssp CEEETTEEEEECT-T-----SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEE-ETTSEEEEEETT
T ss_pred cEEECCEEEEEcC-C-----CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEE-cCCCEEEEEECC
Confidence 4567888998653 2 268899998887 33322111 11111111 111111100 012457788877
Q ss_pred CC--CeEEccCCCCCccCCcEEEECCEEEEEeccCCCCceeeeEEEEECCCCc--eeeCCCCCCCCccceeeEEEeCCEE
Q 014195 99 EL--KWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREMAHSHLGMVTDGRYI 174 (429)
Q Consensus 99 ~~--~W~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~r~~~~~~~~~~~l 174 (429)
++ .|+.-..- ....+.+..++.||+... ...++.||+.+.+ |+.-...+....+...+.++.++.|
T Consensus 122 tG~~~W~~~~~~---~~~~~p~~~~~~v~v~~~-------~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v 191 (376)
T 3q7m_A 122 DGTVAWQTKVAG---EALSRPVVSDGLVLIHTS-------NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAA 191 (376)
T ss_dssp TCCEEEEEECSS---CCCSCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEE
T ss_pred CCCEEEEEeCCC---ceEcCCEEECCEEEEEcC-------CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEE
Confidence 65 47553221 112233455888887542 1258999998876 8764322211112234445568877
Q ss_pred EEEeCeeCCCCCCCCceeEEEeCCCCc--eEeCCCCCCCC--------CCceEEEECCEEEEEeCCCCCCCCccccceEe
Q 014195 175 YVVTGQYGPQCRGPTAHTFVLDTETKK--WQDLPPLPVPR--------YAPATQLWRGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 175 yv~GG~~~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~r--------~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
|+- .. ...+..+|+.+.+ |+.-...+... .....+..++.+|+.+. + .....++.
T Consensus 192 ~~g-~~--------~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~-~-----g~l~~~d~ 256 (376)
T 3q7m_A 192 VVG-GD--------NGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY-N-----GNLTALDL 256 (376)
T ss_dssp EEC-CT--------TTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT-T-----SCEEEEET
T ss_pred EEE-cC--------CCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec-C-----cEEEEEEC
Confidence 763 21 3468899988764 77643322111 22334566888888742 1 11222221
Q ss_pred eeecCCccccceeeccCCCCCCCceeEEEeCCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCC--CeEE
Q 014195 245 AVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEM--KWKV 321 (429)
Q Consensus 245 ~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~--~W~~ 321 (429)
......|+.... . ....+..++.||+..... .++.+| .+. .|+.
T Consensus 257 -----~tG~~~w~~~~~----~-~~~~~~~~~~l~~~~~~g-----------------------~l~~~d~~tG~~~w~~ 303 (376)
T 3q7m_A 257 -----RSGQIMWKRELG----S-VNDFIVDGNRIYLVDQND-----------------------RVMALTIDGGVTLWTQ 303 (376)
T ss_dssp -----TTCCEEEEECCC----C-EEEEEEETTEEEEEETTC-----------------------CEEEEETTTCCEEEEE
T ss_pred -----CCCcEEeeccCC----C-CCCceEECCEEEEEcCCC-----------------------eEEEEECCCCcEEEee
Confidence 122335765421 1 235566788899876421 277887 443 4776
Q ss_pred cCCCCCCCCCcceeEEEECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCC--eEEecccCcceeeeeeEEECCEEEE
Q 014195 322 LPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLK--WHVIGKLPYRVKTTLAGYWNGWLYF 399 (429)
Q Consensus 322 ~~~~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~--W~~v~~lp~~r~~~~~~~~~~~i~v 399 (429)
-. +.. +.. .+.++.++.||+.... ..++.||+++.+ |+. .++........+..++.||+
T Consensus 304 ~~-~~~-~~~--~~~~~~~~~l~v~~~~-------------g~l~~~d~~tG~~~~~~--~~~~~~~~~~~~~~~~~l~v 364 (376)
T 3q7m_A 304 SD-LLH-RLL--TSPVLYNGNLVVGDSE-------------GYLHWINVEDGRFVAQQ--KVDSSGFQTEPVAADGKLLI 364 (376)
T ss_dssp CT-TTT-SCC--CCCEEETTEEEEECTT-------------SEEEEEETTTCCEEEEE--ECCTTCBCSCCEEETTEEEE
T ss_pred cc-cCC-Ccc--cCCEEECCEEEEEeCC-------------CeEEEEECCCCcEEEEE--ecCCCcceeCCEEECCEEEE
Confidence 32 111 111 1235678888876421 269999998876 543 22222223344557888888
Q ss_pred Ec
Q 014195 400 TS 401 (429)
Q Consensus 400 ~G 401 (429)
..
T Consensus 365 ~~ 366 (376)
T 3q7m_A 365 QA 366 (376)
T ss_dssp EB
T ss_pred Ee
Confidence 63
No 20
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.90 E-value=0.011 Score=55.60 Aligned_cols=235 Identities=18% Similarity=0.240 Sum_probs=124.0
Q ss_pred cccccccccCC--CeEEccCCC-------CCccCCcEEEECCEEEEEeccCCCCceeeeEEEEECCCCc--eeeCCCCCC
Q 014195 90 ATFQDLPAPEL--KWEKMKAAP-------VPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPR 158 (429)
Q Consensus 90 ~~~~~~d~~~~--~W~~~~~~p-------~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~ 158 (429)
..+..+|..+. .|+.-.... ........+..++.||+.... ..+.++|..+.+ |+.-.. .
T Consensus 63 g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~-------g~l~a~d~~tG~~~W~~~~~--~ 133 (376)
T 3q7m_A 63 GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK-------AQVYALNTSDGTVAWQTKVA--G 133 (376)
T ss_dssp SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT-------SEEEEEETTTCCEEEEEECS--S
T ss_pred CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC-------CEEEEEECCCCCEEEEEeCC--C
Confidence 35778887655 476533211 112223345568888885431 358999998775 765321 1
Q ss_pred CCccceeeEEEeCCEEEEEeCeeCCCCCCCCceeEEEeCCCCc--eEeCCCCCC--CCCCceEEEECCEEEEEeCCCCCC
Q 014195 159 EMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKK--WQDLPPLPV--PRYAPATQLWRGRLHVMGGSGENR 234 (429)
Q Consensus 159 ~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~--~r~~~~~~~~~~~lyv~GG~~~~~ 234 (429)
....+.++.++.||+... ...++.||+.+.+ |+.-...+. .+...+.+..++.+|+- ..++
T Consensus 134 ---~~~~~p~~~~~~v~v~~~---------~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g-~~~g-- 198 (376)
T 3q7m_A 134 ---EALSRPVVSDGLVLIHTS---------NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVG-GDNG-- 198 (376)
T ss_dssp ---CCCSCCEEETTEEEEECT---------TSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEEC-CTTT--
T ss_pred ---ceEcCCEEECCEEEEEcC---------CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEE-cCCC--
Confidence 112223456888887532 3478999998775 876543221 22234445567877763 2221
Q ss_pred CCccccceEeeeecCCccccceeeccCCCCCC--------CceeEEEeCCEEEEEcccCCCCCCCCCCCccccccCCeee
Q 014195 235 YTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGG--------PHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVV 306 (429)
Q Consensus 235 ~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~--------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 306 (429)
.+..++. ......|+.....|... .....+..++.||+.+. ++
T Consensus 199 ---~l~~~d~-----~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~-~g-------------------- 249 (376)
T 3q7m_A 199 ---RVSAVLM-----EQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY-NG-------------------- 249 (376)
T ss_dssp ---EEEEEET-----TTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT-TS--------------------
T ss_pred ---EEEEEEC-----CCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec-Cc--------------------
Confidence 1222221 12344576643333211 11244566888888652 11
Q ss_pred eCceEEeC-CC--CCeEEcCCCCCCCCCcceeEEEECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCC--eEEeccc
Q 014195 307 YDDVYMLD-DE--MKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLK--WHVIGKL 381 (429)
Q Consensus 307 ~~~v~~~d-~~--~~W~~~~~~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~--W~~v~~l 381 (429)
.++.+| .+ ..|+.-.. . ..+.+..++.||+.... ..++.||+++.+ |+.- .+
T Consensus 250 --~l~~~d~~tG~~~w~~~~~--~-----~~~~~~~~~~l~~~~~~-------------g~l~~~d~~tG~~~w~~~-~~ 306 (376)
T 3q7m_A 250 --NLTALDLRSGQIMWKRELG--S-----VNDFIVDGNRIYLVDQN-------------DRVMALTIDGGVTLWTQS-DL 306 (376)
T ss_dssp --CEEEEETTTCCEEEEECCC--C-----EEEEEEETTEEEEEETT-------------CCEEEEETTTCCEEEEEC-TT
T ss_pred --EEEEEECCCCcEEeeccCC--C-----CCCceEECCEEEEEcCC-------------CeEEEEECCCCcEEEeec-cc
Confidence 277777 43 35775321 1 12346678899887631 268999998764 6642 12
Q ss_pred CcceeeeeeEEECCEEEEEc
Q 014195 382 PYRVKTTLAGYWNGWLYFTS 401 (429)
Q Consensus 382 p~~r~~~~~~~~~~~i~v~G 401 (429)
+ .+.....+..++.||+..
T Consensus 307 ~-~~~~~~~~~~~~~l~v~~ 325 (376)
T 3q7m_A 307 L-HRLLTSPVLYNGNLVVGD 325 (376)
T ss_dssp T-TSCCCCCEEETTEEEEEC
T ss_pred C-CCcccCCEEECCEEEEEe
Confidence 1 122233445677777653
No 21
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.83 E-value=0.0034 Score=58.06 Aligned_cols=253 Identities=11% Similarity=0.036 Sum_probs=132.7
Q ss_pred ccccccccccCCCeEEcc-----CCCCCccCCcEEEECCEEEEEeccCCCCceeeeEEEEECCCCce-eeCCCCCCCCcc
Q 014195 89 PATFQDLPAPELKWEKMK-----AAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTW-GGRFDMPREMAH 162 (429)
Q Consensus 89 ~~~~~~~d~~~~~W~~~~-----~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W-~~~~~~~~~~~r 162 (429)
...+..+|+.++++..-- ..+.......++..++++|+.... .+.+.++|+.+.+- ..++....
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~------~~~v~viD~~t~~~~~~i~~~~~---- 85 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNN------SHVIFAIDINTFKEVGRITGFTS---- 85 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGG------GTEEEEEETTTCCEEEEEECCSS----
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcC------CCEEEEEECcccEEEEEcCCCCC----
Confidence 355677888877664311 112222334566679999998753 24589999998876 33433322
Q ss_pred ceeeEEE-eCCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCC----CCCCceEEEECCEEEEEeCCCCCCCCc
Q 014195 163 SHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPV----PRYAPATQLWRGRLHVMGGSGENRYTP 237 (429)
Q Consensus 163 ~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~----~r~~~~~~~~~~~lyv~GG~~~~~~~~ 237 (429)
...+++ .++++|+.... ...+.++|+.+.+-...-+... ...-..++..+++||+..-. ...
T Consensus 86 -p~~i~~~~~g~lyv~~~~--------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~----~~~ 152 (328)
T 3dsm_A 86 -PRYIHFLSDEKAYVTQIW--------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS----YQN 152 (328)
T ss_dssp -EEEEEEEETTEEEEEEBS--------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT----TCC
T ss_pred -CcEEEEeCCCeEEEEECC--------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC----CCC
Confidence 233444 67899998632 4678999999987543211111 00233455578999998520 112
Q ss_pred cccceEeeeecCCccccceeeccCCCCCCCceeEEEeCCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CC
Q 014195 238 EVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DE 316 (429)
Q Consensus 238 ~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~ 316 (429)
.+.+++ +.+.+.....+....-. ..+..-++++|+..-...... +. ....+.++.+| .+
T Consensus 153 ~v~viD-------~~t~~~~~~i~~g~~p~-~i~~~~dG~l~v~~~~~~~~~--~~----------~~~~~~v~~id~~t 212 (328)
T 3dsm_A 153 RILKID-------TETDKVVDELTIGIQPT-SLVMDKYNKMWTITDGGYEGS--PY----------GYEAPSLYRIDAET 212 (328)
T ss_dssp EEEEEE-------TTTTEEEEEEECSSCBC-CCEECTTSEEEEEBCCBCTTC--SS----------CBCCCEEEEEETTT
T ss_pred EEEEEE-------CCCCeEEEEEEcCCCcc-ceEEcCCCCEEEEECCCccCC--cc----------ccCCceEEEEECCC
Confidence 333333 55555443222211111 123334688888764321100 00 00023588998 66
Q ss_pred CCeEEcCCCCCCCCCcceeEEEE--CCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEEecccCc-ceeeeeeEE-
Q 014195 317 MKWKVLPSMPKPDSHIEFAWVLV--NNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIGKLPY-RVKTTLAGY- 392 (429)
Q Consensus 317 ~~W~~~~~~~~~r~~~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v~~lp~-~r~~~~~~~- 392 (429)
.+....-.++... . ...++.. ++.+|+..+ .++.+|+++.+.....-++. .....+++.
T Consensus 213 ~~v~~~~~~~~g~-~-p~~la~~~d~~~lyv~~~---------------~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vd 275 (328)
T 3dsm_A 213 FTVEKQFKFKLGD-W-PSEVQLNGTRDTLYWINN---------------DIWRMPVEADRVPVRPFLEFRDTKYYGLTVN 275 (328)
T ss_dssp TEEEEEEECCTTC-C-CEEEEECTTSCEEEEESS---------------SEEEEETTCSSCCSSCSBCCCSSCEEEEEEC
T ss_pred CeEEEEEecCCCC-C-ceeEEEecCCCEEEEEcc---------------EEEEEECCCCceeeeeeecCCCCceEEEEEc
Confidence 6554322222211 1 1233444 467887643 48899998877532222222 122334443
Q ss_pred -ECCEEEEEc
Q 014195 393 -WNGWLYFTS 401 (429)
Q Consensus 393 -~~~~i~v~G 401 (429)
.+++||+..
T Consensus 276 p~~g~lyva~ 285 (328)
T 3dsm_A 276 PNNGEVYVAD 285 (328)
T ss_dssp TTTCCEEEEE
T ss_pred CCCCeEEEEc
Confidence 367899986
No 22
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.64 E-value=0.0084 Score=57.72 Aligned_cols=263 Identities=13% Similarity=0.072 Sum_probs=122.3
Q ss_pred cceeeeecCCCcccceeeeeeecCCCCe--EEecCCCCCCCc-ceeeeecCCCCcCcccccccccccccCCCeEEccCCC
Q 014195 33 ADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGE-NIGVKTKKDVVPKRILPATFQDLPAPELKWEKMKAAP 109 (429)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~yd~~~~~--~~~p~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p 109 (429)
++...+.|+.++ .+..||..+.+ ..+.. +.... .+... +..... ......+..+|..+.+- +..+.
T Consensus 128 ~g~~l~sg~~dg-----~i~vwd~~~~~~~~~~~~--h~~~v~~~~~~-~~~l~s-~~~dg~i~vwd~~~~~~--~~~~~ 196 (445)
T 2ovr_B 128 CGNRIVSGSDDN-----TLKVWSAVTGKCLRTLVG--HTGGVWSSQMR-DNIIIS-GSTDRTLKVWNAETGEC--IHTLY 196 (445)
T ss_dssp ETTEEEEEETTS-----CEEEEETTTCCEEEECCC--CSSCEEEEEEE-TTEEEE-EETTSCEEEEETTTTEE--EEEEC
T ss_pred cCCEEEEEECCC-----cEEEEECCCCcEEEEEcC--CCCCEEEEEec-CCEEEE-EeCCCeEEEEECCcCcE--EEEEC
Confidence 344455566555 56788887776 33322 11111 11111 111111 11233455566555432 22222
Q ss_pred CCccCCcEEEECCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCC
Q 014195 110 VPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPT 189 (429)
Q Consensus 110 ~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~ 189 (429)
.......+...++..++.|+.++ .+.+||..+.+-...-.... ..-.++.. ++..++.|+.+
T Consensus 197 ~h~~~v~~~~~~~~~l~s~s~dg------~i~~wd~~~~~~~~~~~~~~---~~v~~~~~-~~~~l~~~~~d-------- 258 (445)
T 2ovr_B 197 GHTSTVRCMHLHEKRVVSGSRDA------TLRVWDIETGQCLHVLMGHV---AAVRCVQY-DGRRVVSGAYD-------- 258 (445)
T ss_dssp CCSSCEEEEEEETTEEEEEETTS------EEEEEESSSCCEEEEEECCS---SCEEEEEE-CSSCEEEEETT--------
T ss_pred CCCCcEEEEEecCCEEEEEeCCC------EEEEEECCCCcEEEEEcCCc---ccEEEEEE-CCCEEEEEcCC--------
Confidence 22222223333455566676543 48889988765432211111 11122333 66667776642
Q ss_pred ceeEEEeCCCCceEeCCCCCCCCCCceEEEECCEEEEEeCCCCCCCCccccceEeeeecCCccccceeeccCCCCCCCce
Q 014195 190 AHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHR 269 (429)
Q Consensus 190 ~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~ 269 (429)
..+..||+.+.+-.. .+......-..+..++..++.|+.++ .+..|++ .+.+- ...+.......
T Consensus 259 g~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~d~-----~i~i~d~-------~~~~~--~~~~~~~~~~v 322 (445)
T 2ovr_B 259 FMVKVWDPETETCLH--TLQGHTNRVYSLQFDGIHVVSGSLDT-----SIRVWDV-------ETGNC--IHTLTGHQSLT 322 (445)
T ss_dssp SCEEEEEGGGTEEEE--EECCCSSCEEEEEECSSEEEEEETTS-----CEEEEET-------TTCCE--EEEECCCCSCE
T ss_pred CEEEEEECCCCcEeE--EecCCCCceEEEEECCCEEEEEeCCC-----eEEEEEC-------CCCCE--EEEEcCCcccE
Confidence 457788887654322 11211222233445777778877653 4566663 22211 11111111112
Q ss_pred eEEEeCCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCe-EEcCCCCCCCCCcceeEEEECCEEEEEc
Q 014195 270 ACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKW-KVLPSMPKPDSHIEFAWVLVNNSIVIVG 347 (429)
Q Consensus 270 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W-~~~~~~~~~r~~~~~~~~~~~~~i~v~G 347 (429)
.+...++..++.|+.++. +..+| .+.+- ..+........ ....+..++..++.|
T Consensus 323 ~~~~~~~~~l~~~~~dg~----------------------i~vwd~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~l~s~ 378 (445)
T 2ovr_B 323 SGMELKDNILVSGNADST----------------------VKIWDIKTGQCLQTLQGPNKHQS--AVTCLQFNKNFVITS 378 (445)
T ss_dssp EEEEEETTEEEEEETTSC----------------------EEEEETTTCCEEEEECSTTSCSS--CEEEEEECSSEEEEE
T ss_pred EEEEEeCCEEEEEeCCCe----------------------EEEEECCCCcEEEEEccCCCCCC--CEEEEEECCCEEEEE
Confidence 334445667777776533 55565 33322 22221111111 122355677788888
Q ss_pred ccCCCCCCccceeeeCcEEEEecCCCCeE
Q 014195 348 GTTEKHPTTKKMVLVGEIFQFNLNTLKWH 376 (429)
Q Consensus 348 G~~~~~~~~~~~~~~~~i~~yd~~~~~W~ 376 (429)
+.++ .|.+||..+.+..
T Consensus 379 ~~dg------------~v~iwd~~~~~~~ 395 (445)
T 2ovr_B 379 SDDG------------TVKLWDLKTGEFI 395 (445)
T ss_dssp ETTS------------EEEEEETTTCCEE
T ss_pred eCCC------------eEEEEECCCCcee
Confidence 7642 6889999887653
No 23
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.46 E-value=0.043 Score=50.50 Aligned_cols=214 Identities=12% Similarity=0.048 Sum_probs=113.5
Q ss_pred eeeEEEEECCCCceeeCCC---CCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCCceeEEEeCCCCce-EeCCCCCCCC
Q 014195 137 HSHVDIYNFTDNTWGGRFD---MPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKW-QDLPPLPVPR 212 (429)
Q Consensus 137 ~~~~~~yd~~~~~W~~~~~---~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W-~~~~~~p~~r 212 (429)
...+-+||++++++..--. -..+.......++..++++|+.... ...+.++|+.+.+- ..++....|
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~--------~~~v~viD~~t~~~~~~i~~~~~p- 86 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNN--------SHVIFAIDINTFKEVGRITGFTSP- 86 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGG--------GTEEEEEETTTCCEEEEEECCSSE-
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcC--------CCEEEEEECcccEEEEEcCCCCCC-
Confidence 3568999999998764210 0112233445677789999998642 45789999998876 334333222
Q ss_pred CCceEEE-ECCEEEEEeCCCCCCCCccccceEeeeecCCccccceeeccCCCCC----CCceeEEEeCCEEEEEcc-cCC
Q 014195 213 YAPATQL-WRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRG----GPHRACVVVDDRLLVIGG-QEG 286 (429)
Q Consensus 213 ~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~----~~~~~~~~~~~~iyv~GG-~~~ 286 (429)
+.++. -++++|+....+ ..+.+++ +.+.+-....+.... ..-..++..+++||+..- ..
T Consensus 87 --~~i~~~~~g~lyv~~~~~-----~~v~~iD-------~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~- 151 (328)
T 3dsm_A 87 --RYIHFLSDEKAYVTQIWD-----YRIFIIN-------PKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQ- 151 (328)
T ss_dssp --EEEEEEETTEEEEEEBSC-----SEEEEEE-------TTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTC-
T ss_pred --cEEEEeCCCeEEEEECCC-----CeEEEEE-------CCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCC-
Confidence 33444 688999987432 2333443 555443321122210 011234447899999852 21
Q ss_pred CCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEE-cCCCCCCCCCcceeEEEECCEEEEEcccCCCCCC-ccceeeeC
Q 014195 287 DFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKV-LPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPT-TKKMVLVG 363 (429)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~-~~~~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~-~~~~~~~~ 363 (429)
+.+..+| .+.+... ++....|. .. .+..++++|+....+..... .. -.+
T Consensus 152 ---------------------~~v~viD~~t~~~~~~i~~g~~p~---~i-~~~~dG~l~v~~~~~~~~~~~~~---~~~ 203 (328)
T 3dsm_A 152 ---------------------NRILKIDTETDKVVDELTIGIQPT---SL-VMDKYNKMWTITDGGYEGSPYGY---EAP 203 (328)
T ss_dssp ---------------------CEEEEEETTTTEEEEEEECSSCBC---CC-EECTTSEEEEEBCCBCTTCSSCB---CCC
T ss_pred ---------------------CEEEEEECCCCeEEEEEEcCCCcc---ce-EEcCCCCEEEEECCCccCCcccc---CCc
Confidence 1377887 6555432 22212221 12 23456898887643311100 00 024
Q ss_pred cEEEEecCCCCeEEecccCcceeeeeeEEE--CCEEEEEcc
Q 014195 364 EIFQFNLNTLKWHVIGKLPYRVKTTLAGYW--NGWLYFTSG 402 (429)
Q Consensus 364 ~i~~yd~~~~~W~~v~~lp~~r~~~~~~~~--~~~i~v~GG 402 (429)
.++++|+++.+....-.++.......++.. ++.||+..+
T Consensus 204 ~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~ 244 (328)
T 3dsm_A 204 SLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN 244 (328)
T ss_dssp EEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS
T ss_pred eEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc
Confidence 799999998876543334332222333332 355666543
No 24
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.44 E-value=0.013 Score=51.36 Aligned_cols=167 Identities=18% Similarity=0.185 Sum_probs=101.1
Q ss_pred CCCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEEECCEEEEEeCCCCCC
Q 014195 155 DMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENR 234 (429)
Q Consensus 155 ~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~ 234 (429)
..|.+..-.-.++...++.||+..|..+ .+.+.++|+++.+=..--+++..-...+++..+++||+....++
T Consensus 14 ~~phd~~~ftqGL~~~~~~LyestG~~g------~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~-- 85 (243)
T 3mbr_X 14 RYPHDTTAFTEGLFYLRGHLYESTGETG------RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNH-- 85 (243)
T ss_dssp EEECCTTCCEEEEEEETTEEEEEECCTT------SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSS--
T ss_pred EcCCCCccccccEEEECCEEEEECCCCC------CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCC--
Confidence 3344323445678888999999988654 46788999999987766666666666778889999999965432
Q ss_pred CCccccceEeeeecCCccccceeeccCCCCCCCceeEEEeCCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC
Q 014195 235 YTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD 314 (429)
Q Consensus 235 ~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 314 (429)
...+|+ +.+.+-.. ..+....+.+++.-+++||+--|.+ .++.+|
T Consensus 86 ---~v~v~D-------~~tl~~~~--ti~~~~~Gwglt~dg~~L~vSdgs~-----------------------~l~~iD 130 (243)
T 3mbr_X 86 ---EGFVYD-------LATLTPRA--RFRYPGEGWALTSDDSHLYMSDGTA-----------------------VIRKLD 130 (243)
T ss_dssp ---EEEEEE-------TTTTEEEE--EEECSSCCCEEEECSSCEEEECSSS-----------------------EEEEEC
T ss_pred ---EEEEEE-------CCcCcEEE--EEeCCCCceEEeeCCCEEEEECCCC-----------------------eEEEEe
Confidence 233333 33332222 2222223446666677799987632 478888
Q ss_pred -CCCCeE-EcC--CCCCCCCCcceeEEEECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEE
Q 014195 315 -DEMKWK-VLP--SMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHV 377 (429)
Q Consensus 315 -~~~~W~-~~~--~~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~ 377 (429)
.+.+-. .+. .-+.+..... -+...+++||+-- +. .++|.+.||++.+-..
T Consensus 131 p~t~~~~~~I~V~~~g~~~~~lN-eLe~~~G~lyanv-w~-----------s~~I~vIDp~tG~V~~ 184 (243)
T 3mbr_X 131 PDTLQQVGSIKVTAGGRPLDNLN-ELEWVNGELLANV-WL-----------TSRIARIDPASGKVVA 184 (243)
T ss_dssp TTTCCEEEEEECEETTEECCCEE-EEEEETTEEEEEE-TT-----------TTEEEEECTTTCBEEE
T ss_pred CCCCeEEEEEEEccCCcccccce-eeEEeCCEEEEEE-CC-----------CCeEEEEECCCCCEEE
Confidence 554432 221 1122211111 1344588988443 21 3489999999986543
No 25
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.42 E-value=0.015 Score=50.98 Aligned_cols=112 Identities=17% Similarity=0.108 Sum_probs=77.8
Q ss_pred eEEccCCCCCccCC--cEEEECCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEeCCEEEEEeC
Q 014195 102 WEKMKAAPVPRLDG--AAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTG 179 (429)
Q Consensus 102 W~~~~~~p~~R~~~--~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG 179 (429)
.+-+...|.....+ ++...++.||+..|..+.+ .+.++|+.+++=..--+++. .-...+++..+++||+...
T Consensus 9 ~~v~~~~phd~~~ftqGL~~~~~~LyestG~~g~S----~v~~vD~~tgkv~~~~~l~~--~~fgeGi~~~~~~ly~ltw 82 (243)
T 3mbr_X 9 YRVVKRYPHDTTAFTEGLFYLRGHLYESTGETGRS----SVRKVDLETGRILQRAEVPP--PYFGAGIVAWRDRLIQLTW 82 (243)
T ss_dssp EEEEEEEECCTTCCEEEEEEETTEEEEEECCTTSC----EEEEEETTTCCEEEEEECCT--TCCEEEEEEETTEEEEEES
T ss_pred eEEEEEcCCCCccccccEEEECCEEEEECCCCCCc----eEEEEECCCCCEEEEEeCCC--CcceeEEEEeCCEEEEEEe
Confidence 34444455444444 6677789999999976643 58899999998765545554 4456778889999999854
Q ss_pred eeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEEECCEEEEEeC
Q 014195 180 QYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGG 229 (429)
Q Consensus 180 ~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG 229 (429)
. .+.+++||+++.+-.. .++.+..+.+++.-+++||+.-|
T Consensus 83 ~--------~~~v~v~D~~tl~~~~--ti~~~~~Gwglt~dg~~L~vSdg 122 (243)
T 3mbr_X 83 R--------NHEGFVYDLATLTPRA--RFRYPGEGWALTSDDSHLYMSDG 122 (243)
T ss_dssp S--------SSEEEEEETTTTEEEE--EEECSSCCCEEEECSSCEEEECS
T ss_pred e--------CCEEEEEECCcCcEEE--EEeCCCCceEEeeCCCEEEEECC
Confidence 3 5689999998865433 23333456677776788998865
No 26
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.39 E-value=0.033 Score=51.17 Aligned_cols=101 Identities=13% Similarity=0.042 Sum_probs=52.5
Q ss_pred ccccccccccCCCeEEccCCCCCccCCcEEEE-C-CEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCC------
Q 014195 89 PATFQDLPAPELKWEKMKAAPVPRLDGAAIQI-K-NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREM------ 160 (429)
Q Consensus 89 ~~~~~~~d~~~~~W~~~~~~p~~R~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~------ 160 (429)
...+..+|..+.+-...-+. ...-+.++.. + +.+|+.+..+ ..+.+||+.+.+-...-+.+...
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~ 139 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHN--DLKPFGATINNTTQTLWFGNTVN------SAVTAIDAKTGEVKGRLVLDDRKRTEEVR 139 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEE--SSCCCSEEEETTTTEEEEEETTT------TEEEEEETTTCCEEEEEESCCCCCCSSCC
T ss_pred CccEEEEcCCCCeEEEEEec--CCCcceEEECCCCCEEEEEecCC------CEEEEEeCCCCeeEEEEecCCCccccccC
Confidence 34566777776654332222 1222334443 3 4688876543 25899999888743221221100
Q ss_pred ccceeeEEE--eCCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEe
Q 014195 161 AHSHLGMVT--DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQD 204 (429)
Q Consensus 161 ~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~ 204 (429)
+..-.++++ .++.+|+.+... ...++.+|+.+.+-..
T Consensus 140 ~~~~~~~~~s~dg~~l~~~~~~~-------~~~i~~~d~~~~~~~~ 178 (353)
T 3vgz_A 140 PLQPRELVADDATNTVYISGIGK-------ESVIWVVDGGNIKLKT 178 (353)
T ss_dssp CCEEEEEEEETTTTEEEEEEESS-------SCEEEEEETTTTEEEE
T ss_pred CCCCceEEECCCCCEEEEEecCC-------CceEEEEcCCCCceEE
Confidence 111233444 356788775211 3568999998776443
No 27
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.33 E-value=0.0018 Score=61.14 Aligned_cols=169 Identities=15% Similarity=0.109 Sum_probs=84.2
Q ss_pred ceeeeecCCCcccceeeeeeecCCCCe--EEecCCCCCCCcceeeeecC-CCCcCcccccccccccccCCCeEEccCCCC
Q 014195 34 DFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTKK-DVVPKRILPATFQDLPAPELKWEKMKAAPV 110 (429)
Q Consensus 34 ~~ly~~GG~~~~~~~~~~~~yd~~~~~--~~~p~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 110 (429)
..+|+.|+.++ .+..||..+.+ ..++.... -..+...... ...........+..+|..+++....-..+
T Consensus 2 ~~l~vs~~~d~-----~v~v~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~- 73 (391)
T 1l0q_A 2 TFAYIANSESD-----NISVIDVTSNKVTATIPVGSN--PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG- 73 (391)
T ss_dssp EEEEEEETTTT-----EEEEEETTTTEEEEEEECSSS--EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS-
T ss_pred CEEEEEcCCCC-----EEEEEECCCCeEEEEeecCCC--cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECC-
Confidence 56888888666 67889998887 33332111 1112211111 11111112345667777665433222211
Q ss_pred CccCCcEEEE--CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe--CCEEEEEeCeeCCCCC
Q 014195 111 PRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCR 186 (429)
Q Consensus 111 ~R~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~ 186 (429)
..-.+++.. +..||+.+..+ ..+.+||+.+++....-.... ...+++.. +..||+.++.
T Consensus 74 -~~v~~~~~spdg~~l~~~~~~~------~~v~v~d~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~~~~~------ 136 (391)
T 1l0q_A 74 -SSPQGVAVSPDGKQVYVTNMAS------STLSVIDTTSNTVAGTVKTGK----SPLGLALSPDGKKLYVTNNG------ 136 (391)
T ss_dssp -SSEEEEEECTTSSEEEEEETTT------TEEEEEETTTTEEEEEEECSS----SEEEEEECTTSSEEEEEETT------
T ss_pred -CCccceEECCCCCEEEEEECCC------CEEEEEECCCCeEEEEEeCCC----CcceEEECCCCCEEEEEeCC------
Confidence 111222222 34566665432 348999999887644322221 12344443 4467777643
Q ss_pred CCCceeEEEeCCCCceEeCCCCCCCCCCceEEEE--CCEEEEEeCCC
Q 014195 187 GPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW--RGRLHVMGGSG 231 (429)
Q Consensus 187 ~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~ 231 (429)
...+.+||+.+.+....-... ..-..++.. +..||+.++.+
T Consensus 137 --~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~dg~~l~~~~~~~ 179 (391)
T 1l0q_A 137 --DKTVSVINTVTKAVINTVSVG--RSPKGIAVTPDGTKVYVANFDS 179 (391)
T ss_dssp --TTEEEEEETTTTEEEEEEECC--SSEEEEEECTTSSEEEEEETTT
T ss_pred --CCEEEEEECCCCcEEEEEecC--CCcceEEECCCCCEEEEEeCCC
Confidence 357889999887765432221 111222222 34677776644
No 28
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.25 E-value=0.0075 Score=55.25 Aligned_cols=99 Identities=7% Similarity=-0.016 Sum_probs=46.5
Q ss_pred ccccccccc--CCCeEEccCCCCCccCCcEEEE-CC-EEEEEeccCCCCceeeeEEEEECCCC-ceeeCCCCCCCCccce
Q 014195 90 ATFQDLPAP--ELKWEKMKAAPVPRLDGAAIQI-KN-LLYVFAGYGSIDYVHSHVDIYNFTDN-TWGGRFDMPREMAHSH 164 (429)
Q Consensus 90 ~~~~~~d~~--~~~W~~~~~~p~~R~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~~~r~~ 164 (429)
..+..|+.. +.+++.+..++....-..++.. ++ .||+.+..+ ..+.+||.... ..+.+..++.. ..-
T Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~--~~~ 131 (343)
T 1ri6_A 60 FRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNA------GNVSVTRLEDGLPVGVVDVVEGL--DGC 131 (343)
T ss_dssp TEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTT------TEEEEEEEETTEEEEEEEEECCC--TTB
T ss_pred CeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCC------CeEEEEECCCCccccccccccCC--CCc
Confidence 344454444 6677766554433222233332 33 566655322 23777777322 12222222221 112
Q ss_pred eeEEEe--CCEEEEEeCeeCCCCCCCCceeEEEeCCC-CceEe
Q 014195 165 LGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTET-KKWQD 204 (429)
Q Consensus 165 ~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t-~~W~~ 204 (429)
.++++. +..||+.+.. ...+.+||..+ .+...
T Consensus 132 ~~~~~s~dg~~l~~~~~~--------~~~v~~~d~~~~~~~~~ 166 (343)
T 1ri6_A 132 HSANISPDNRTLWVPALK--------QDRICLFTVSDDGHLVA 166 (343)
T ss_dssp CCCEECTTSSEEEEEEGG--------GTEEEEEEECTTSCEEE
T ss_pred eEEEECCCCCEEEEecCC--------CCEEEEEEecCCCceee
Confidence 223332 4567776522 34688899887 66653
No 29
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.25 E-value=0.089 Score=50.56 Aligned_cols=172 Identities=13% Similarity=0.094 Sum_probs=80.6
Q ss_pred CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEEECCEEEEEeCCCCCCCCccccceEeeeecCC
Q 014195 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGK 250 (429)
Q Consensus 171 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d 250 (429)
++.+++.|+. ...+..||..+.+-...-.............-+++.++.|+.++ .+..|++
T Consensus 279 ~~~~l~~~~~--------d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg-----~i~vwd~------ 339 (464)
T 3v7d_B 279 HGNIVVSGSY--------DNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDT-----TIRIWDL------ 339 (464)
T ss_dssp ETTEEEEEET--------TSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTS-----CEEEEET------
T ss_pred CCCEEEEEeC--------CCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCC-----cEEEEEC------
Confidence 3445556553 34678889877653322111111111111222566777777553 4666763
Q ss_pred ccccceeeccCCCCCCCceeEEEeCCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCCCCCCC
Q 014195 251 PLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPD 329 (429)
Q Consensus 251 ~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~~~~r 329 (429)
.+.+ ....+........++..++..++.|+.++. +..+| .+..-..... ...
T Consensus 340 -~~~~--~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~----------------------v~vwd~~~~~~~~~~~--~~~ 392 (464)
T 3v7d_B 340 -ENGE--LMYTLQGHTALVGLLRLSDKFLVSAAADGS----------------------IRGWDANDYSRKFSYH--HTN 392 (464)
T ss_dssp -TTTE--EEEEECCCSSCEEEEEECSSEEEEEETTSE----------------------EEEEETTTCCEEEEEE--CTT
T ss_pred -CCCc--EEEEEeCCCCcEEEEEEcCCEEEEEeCCCc----------------------EEEEECCCCceeeeec--CCC
Confidence 2221 111111111122445556777777776533 45555 3322111111 111
Q ss_pred CCcceeEEEECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEEecccCcceeeeeeEEECCEEEEEcc
Q 014195 330 SHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIGKLPYRVKTTLAGYWNGWLYFTSG 402 (429)
Q Consensus 330 ~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v~~lp~~r~~~~~~~~~~~i~v~GG 402 (429)
. ........++++++.|+ + + .+.+||.++.+-......+....-..+...++.+++.++
T Consensus 393 ~-~~~~~~~~~~~~l~~~~-d--g----------~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~~~l~~~~~ 451 (464)
T 3v7d_B 393 L-SAITTFYVSDNILVSGS-E--N----------QFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVE 451 (464)
T ss_dssp C-CCEEEEEECSSEEEEEE-T--T----------EEEEEETTTCCEEESCTTTTCSEEEEEEEETTEEEEEEE
T ss_pred C-ccEEEEEeCCCEEEEec-C--C----------eEEEEECCCCcEEehhhccCCCcEEEEEecCCEEEEEEE
Confidence 1 12233566788888776 2 1 689999998875442222222222333334555555544
No 30
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.23 E-value=0.0099 Score=55.24 Aligned_cols=236 Identities=11% Similarity=0.086 Sum_probs=111.6
Q ss_pred ccccccccCCCeEEccCCCCCccCCcEEEE--C--CEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceee
Q 014195 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQI--K--NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLG 166 (429)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~R~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~ 166 (429)
.+..+|.....+..+..+...........+ + +.+++.|+.++ .+.+||..+++|..+..+... ...-.+
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg------~v~iwd~~~~~~~~~~~~~~~-~~~v~~ 106 (379)
T 3jrp_A 34 TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG------KVLIWKEENGRWSQIAVHAVH-SASVNS 106 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS------CEEEEEEETTEEEEEEEECCC-SSCEEE
T ss_pred cEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC------EEEEEEcCCCceeEeeeecCC-CcceEE
Confidence 344555554444444444332222222333 2 56777777653 378899999888765444321 122233
Q ss_pred EEEe-C--CEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCC-CCceEEEE--------------CCEEEEEe
Q 014195 167 MVTD-G--RYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPR-YAPATQLW--------------RGRLHVMG 228 (429)
Q Consensus 167 ~~~~-~--~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r-~~~~~~~~--------------~~~lyv~G 228 (429)
++.. + +.+++.|+. ...+..||..+..-.....+.... .-.+++.. ++.+++.|
T Consensus 107 ~~~~~~~~~~~l~~~~~--------d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 178 (379)
T 3jrp_A 107 VQWAPHEYGPLLLVASS--------DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTG 178 (379)
T ss_dssp EEECCGGGCSEEEEEET--------TSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEE
T ss_pred EEeCCCCCCCEEEEecC--------CCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEE
Confidence 3333 2 456666654 346778888765321110010001 11111211 46778887
Q ss_pred CCCCCCCCccccceEeeeecCCccccceeeccCCCCCCCce-eEEE-eC---CEEEEEcccCCCCCCCCCCCccccccCC
Q 014195 229 GSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHR-ACVV-VD---DRLLVIGGQEGDFMAKPGSPIFKCSRRN 303 (429)
Q Consensus 229 G~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~-~~~~-~~---~~iyv~GG~~~~~~~~~~~~~~~~~~~~ 303 (429)
+.++ .+..|++. .....|.....+....... +++. -+ +.+++.|+.++.
T Consensus 179 ~~dg-----~i~i~d~~-----~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~---------------- 232 (379)
T 3jrp_A 179 GADN-----LVKIWKYN-----SDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT---------------- 232 (379)
T ss_dssp ETTS-----CEEEEEEE-----TTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC----------------
T ss_pred eCCC-----eEEEEEec-----CCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCE----------------
Confidence 7653 46677753 2333344333332211111 2222 24 678888886543
Q ss_pred eeeeCceEEeC-CCCCeEEc-CCCCCCCCCcceeEEEECCEEEEEcccCCCCCCccceeeeCcEEEEecC-CCCeEEecc
Q 014195 304 EVVYDDVYMLD-DEMKWKVL-PSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLN-TLKWHVIGK 380 (429)
Q Consensus 304 ~~~~~~v~~~d-~~~~W~~~-~~~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~-~~~W~~v~~ 380 (429)
-.+|.++ ....+... .................+++.++.|+.++ .+.+||.. ...|..+..
T Consensus 233 ----i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg------------~i~iw~~~~~~~~~~~~~ 296 (379)
T 3jrp_A 233 ----CIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDN------------KVTLWKENLEGKWEPAGE 296 (379)
T ss_dssp ----EEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSS------------SEEEEEEEETTEEEEEEE
T ss_pred ----EEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCC------------cEEEEeCCCCCccccccc
Confidence 0244443 22222221 11111111111112334677777777643 46777766 468887765
Q ss_pred cCc
Q 014195 381 LPY 383 (429)
Q Consensus 381 lp~ 383 (429)
+..
T Consensus 297 ~~~ 299 (379)
T 3jrp_A 297 VHQ 299 (379)
T ss_dssp EC-
T ss_pred eec
Confidence 444
No 31
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.23 E-value=0.014 Score=54.17 Aligned_cols=105 Identities=12% Similarity=0.205 Sum_probs=58.0
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 199 (429)
++.++++|+.+ ..+.+||..+.+|+.+..+... ...-.+++.. ++.+++.|+. ...+..||..+
T Consensus 19 ~~~~l~~~~~d------~~v~i~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~~~~~--------dg~i~vwd~~~ 83 (372)
T 1k8k_C 19 DRTQIAICPNN------HEVHIYEKSGNKWVQVHELKEH-NGQVTGVDWAPDSNRIVTCGT--------DRNAYVWTLKG 83 (372)
T ss_dssp TSSEEEEECSS------SEEEEEEEETTEEEEEEEEECC-SSCEEEEEEETTTTEEEEEET--------TSCEEEEEEET
T ss_pred CCCEEEEEeCC------CEEEEEeCCCCcEEeeeeecCC-CCcccEEEEeCCCCEEEEEcC--------CCeEEEEECCC
Confidence 45667777653 2488999998877665444321 1112233333 5556666663 24677888888
Q ss_pred CceEeCCCCCCCCCCceEEEE--CCEEEEEeCCCCCCCCccccceEee
Q 014195 200 KKWQDLPPLPVPRYAPATQLW--RGRLHVMGGSGENRYTPEVDHWSLA 245 (429)
Q Consensus 200 ~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~ 245 (429)
.++.....+.........+.+ ++++++.|+.+ ..+..|++.
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~i~d~~ 126 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGS-----RVISICYFE 126 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETT-----SSEEEEEEE
T ss_pred CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCC-----CEEEEEEec
Confidence 876654322221222222222 56677777654 346667753
No 32
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.23 E-value=0.0087 Score=53.01 Aligned_cols=159 Identities=15% Similarity=0.125 Sum_probs=93.6
Q ss_pred eeeEEEeCCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEEECCEEEEEeCCCCCCCCccccceE
Q 014195 164 HLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWS 243 (429)
Q Consensus 164 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~ 243 (429)
..++...++.||+..|..+ .+.+.++|+++.+=..--+++..-...+++..+++||+....+ ....+|+
T Consensus 45 tqGL~~~~~~LyestG~~g------~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~-----~~v~v~D 113 (262)
T 3nol_A 45 TEGFFYRNGYFYESTGLNG------RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKN-----GLGFVWN 113 (262)
T ss_dssp EEEEEEETTEEEEEEEETT------EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-----SEEEEEE
T ss_pred cceEEEECCEEEEECCCCC------CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeC-----CEEEEEE
Confidence 4566667899999988654 4578899999998665545654445566788899999996543 2233333
Q ss_pred eeeecCCccccceeeccCCCCCCCceeEEEeCCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeE-E
Q 014195 244 LAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWK-V 321 (429)
Q Consensus 244 ~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~-~ 321 (429)
+.+.+-.. .++....+.+++.-++.||+.-|.+ .++.+| .+.+-. .
T Consensus 114 -------~~t~~~~~--ti~~~~eG~glt~dg~~L~~SdGs~-----------------------~i~~iDp~T~~v~~~ 161 (262)
T 3nol_A 114 -------IRNLRQVR--SFNYDGEGWGLTHNDQYLIMSDGTP-----------------------VLRFLDPESLTPVRT 161 (262)
T ss_dssp -------TTTCCEEE--EEECSSCCCCEEECSSCEEECCSSS-----------------------EEEEECTTTCSEEEE
T ss_pred -------CccCcEEE--EEECCCCceEEecCCCEEEEECCCC-----------------------eEEEEcCCCCeEEEE
Confidence 44433222 2222223346666667788876631 478888 554322 2
Q ss_pred cCC--CCCCCCCcceeEEEECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEEe
Q 014195 322 LPS--MPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVI 378 (429)
Q Consensus 322 ~~~--~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v 378 (429)
+.- -..|..... -+...+++||+-- +. .++|.+.||++.+-...
T Consensus 162 I~V~~~g~~~~~lN-ELe~~~G~lyan~-w~-----------~~~I~vIDp~tG~V~~~ 207 (262)
T 3nol_A 162 ITVTAHGEELPELN-ELEWVDGEIFANV-WQ-----------TNKIVRIDPETGKVTGI 207 (262)
T ss_dssp EECEETTEECCCEE-EEEEETTEEEEEE-TT-----------SSEEEEECTTTCBEEEE
T ss_pred EEeccCCccccccc-eeEEECCEEEEEE-cc-----------CCeEEEEECCCCcEEEE
Confidence 221 111211111 1234589988533 21 34899999999865443
No 33
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.09 E-value=0.0039 Score=58.72 Aligned_cols=97 Identities=18% Similarity=0.167 Sum_probs=52.6
Q ss_pred CEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe--CCEEEEEeCeeCCCCCCCCceeEEEeCCC
Q 014195 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (429)
Q Consensus 122 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 199 (429)
..||+.++.+ ..+.+||+.+++....-..+. .-.+++.. +..||+.+.. ...+.+||+.+
T Consensus 44 ~~l~~~~~~d------~~i~v~d~~~~~~~~~~~~~~----~v~~~~~spdg~~l~~~~~~--------~~~v~v~d~~~ 105 (391)
T 1l0q_A 44 TKVYVANAHS------NDVSIIDTATNNVIATVPAGS----SPQGVAVSPDGKQVYVTNMA--------SSTLSVIDTTS 105 (391)
T ss_dssp SEEEEEEGGG------TEEEEEETTTTEEEEEEECSS----SEEEEEECTTSSEEEEEETT--------TTEEEEEETTT
T ss_pred CEEEEECCCC------CeEEEEECCCCeEEEEEECCC----CccceEECCCCCEEEEEECC--------CCEEEEEECCC
Confidence 3677777543 358899998887654322222 12233333 4567776542 35789999998
Q ss_pred CceEeCCCCCCCCCCceEEEE--CCEEEEEeCCCCCCCCccccceE
Q 014195 200 KKWQDLPPLPVPRYAPATQLW--RGRLHVMGGSGENRYTPEVDHWS 243 (429)
Q Consensus 200 ~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~ 243 (429)
++-...-... .....++.. +..||+.++.+ ..+..|+
T Consensus 106 ~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d 144 (391)
T 1l0q_A 106 NTVAGTVKTG--KSPLGLALSPDGKKLYVTNNGD-----KTVSVIN 144 (391)
T ss_dssp TEEEEEEECS--SSEEEEEECTTSSEEEEEETTT-----TEEEEEE
T ss_pred CeEEEEEeCC--CCcceEEECCCCCEEEEEeCCC-----CEEEEEE
Confidence 8654432211 122233332 34577776544 2355555
No 34
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.09 E-value=0.0081 Score=57.70 Aligned_cols=212 Identities=13% Similarity=0.070 Sum_probs=97.6
Q ss_pred cceeeeecCCCcccceeeeeeecCCCCe--EEecCCCCCCCcceeeeecCCCCcCcccccccccccccCCCeEEccCCCC
Q 014195 33 ADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAPELKWEKMKAAPV 110 (429)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~yd~~~~~--~~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 110 (429)
++..++.|+.++ .+..||..+.+ ..+... .... .+................+..+|..+.+-. ..+..
T Consensus 142 d~~~l~~g~~dg-----~i~iwd~~~~~~~~~~~~h--~~~v-~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~--~~~~~ 211 (435)
T 1p22_A 142 DDQKIVSGLRDN-----TIKIWDKNTLECKRILTGH--TGSV-LCLQYDERVIITGSSDSTVRVWDVNTGEML--NTLIH 211 (435)
T ss_dssp CSSEEEEEESSS-----CEEEEESSSCCEEEEECCC--SSCE-EEEECCSSEEEEEETTSCEEEEESSSCCEE--EEECC
T ss_pred CCCEEEEEeCCC-----eEEEEeCCCCeEEEEEcCC--CCcE-EEEEECCCEEEEEcCCCeEEEEECCCCcEE--EEEcC
Confidence 455666777665 56788887776 333321 1111 111111111111112344556666655432 12222
Q ss_pred CccCCcEEEECCEEEEEeccCCCCceeeeEEEEECCCCceeeC-CCCCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCC
Q 014195 111 PRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGR-FDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPT 189 (429)
Q Consensus 111 ~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~ 189 (429)
...........+..++.|+.++ .+.+||..+.+-... ..+... ...-.++.. ++..++.|+. .
T Consensus 212 h~~~v~~l~~~~~~l~s~s~dg------~i~vwd~~~~~~~~~~~~~~~~-~~~v~~~~~-~~~~l~s~~~--------d 275 (435)
T 1p22_A 212 HCEAVLHLRFNNGMMVTCSKDR------SIAVWDMASPTDITLRRVLVGH-RAAVNVVDF-DDKYIVSASG--------D 275 (435)
T ss_dssp CCSCEEEEECCTTEEEEEETTS------CEEEEECSSSSCCEEEEEECCC-SSCEEEEEE-ETTEEEEEET--------T
T ss_pred CCCcEEEEEEcCCEEEEeeCCC------cEEEEeCCCCCCceeeeEecCC-CCcEEEEEe-CCCEEEEEeC--------C
Confidence 2222223333555677777554 378888877653211 111110 111223334 4445555553 3
Q ss_pred ceeEEEeCCCCceEeCCCCCCCCCCceEEEECCEEEEEeCCCCCCCCccccceEeeeecCCccccceeeccCCCCCCCce
Q 014195 190 AHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHR 269 (429)
Q Consensus 190 ~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~ 269 (429)
..+..||..+.+-... +........++..++.+++.|+.++ .+..|++ .+.+ ....+.......
T Consensus 276 g~i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~g~~dg-----~i~iwd~-------~~~~--~~~~~~~h~~~v 339 (435)
T 1p22_A 276 RTIKVWNTSTCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDN-----TIRLWDI-------ECGA--CLRVLEGHEELV 339 (435)
T ss_dssp SEEEEEETTTCCEEEE--EECCSSCEEEEEEETTEEEEEETTS-----CEEEEET-------TTCC--EEEEECCCSSCE
T ss_pred CeEEEEECCcCcEEEE--EcCCCCcEEEEEeCCCEEEEEeCCC-----eEEEEEC-------CCCC--EEEEEeCCcCcE
Confidence 4678899887653321 1111122234445677777777653 4666663 2211 111111111122
Q ss_pred eEEEeCCEEEEEcccCC
Q 014195 270 ACVVVDDRLLVIGGQEG 286 (429)
Q Consensus 270 ~~~~~~~~iyv~GG~~~ 286 (429)
.++..++..++.|+.++
T Consensus 340 ~~~~~~~~~l~sg~~dg 356 (435)
T 1p22_A 340 RCIRFDNKRIVSGAYDG 356 (435)
T ss_dssp EEEECCSSEEEEEETTS
T ss_pred EEEEecCCEEEEEeCCC
Confidence 44455788888888654
No 35
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.95 E-value=0.025 Score=52.43 Aligned_cols=104 Identities=11% Similarity=0.118 Sum_probs=57.7
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-C--CEEEEEeCeeCCCCCCCCceeEEEeC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-G--RYIYVVTGQYGPQCRGPTAHTFVLDT 197 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~--~~lyv~GG~~~~~~~~~~~~~~~yd~ 197 (429)
++..++.|+.++ .+.+||....++..+..+... ...-.+++.. + +.+++.|+.+ ..+..||.
T Consensus 22 ~~~~l~~~~~dg------~i~iw~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~l~s~~~d--------g~v~iwd~ 86 (379)
T 3jrp_A 22 YGKRLATCSSDK------TIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHPKFGTILASCSYD--------GKVLIWKE 86 (379)
T ss_dssp SSSEEEEEETTS------CEEEEEEETTEEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEETT--------SCEEEEEE
T ss_pred CCCEEEEEECCC------cEEEEecCCCcceeeeEecCC-CCcEEEEEeCCCCCCCEEEEeccC--------CEEEEEEc
Confidence 455667776543 377888876666655444321 1122333432 2 5666676643 35778899
Q ss_pred CCCceEeCCCCCCCCCCceEEEE--C--CEEEEEeCCCCCCCCccccceEe
Q 014195 198 ETKKWQDLPPLPVPRYAPATQLW--R--GRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 198 ~t~~W~~~~~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
.+.+|..+..+.........+.+ + +.+++.|+.++ .+..|++
T Consensus 87 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~-----~i~v~d~ 132 (379)
T 3jrp_A 87 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEF 132 (379)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEEC
T ss_pred CCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCC-----cEEEEec
Confidence 99888776544332222233333 2 56777776553 3555654
No 36
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.93 E-value=0.026 Score=53.73 Aligned_cols=99 Identities=14% Similarity=0.089 Sum_probs=53.7
Q ss_pred cccccccccCCCeEEccCCC---CCccCCcEEEE--CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccce
Q 014195 90 ATFQDLPAPELKWEKMKAAP---VPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSH 164 (429)
Q Consensus 90 ~~~~~~d~~~~~W~~~~~~p---~~R~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~ 164 (429)
..+..+|..+.+........ .+......+.+ ++.+++.++.+ ..+.+||+.+.+....-.... ..-
T Consensus 144 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d------~~v~~~d~~~~~~~~~~~~~~---~~~ 214 (433)
T 3bws_A 144 EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA------NAVHVFDLKTLAYKATVDLTG---KWS 214 (433)
T ss_dssp SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG------TEEEEEETTTCCEEEEEECSS---SSE
T ss_pred CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC------CEEEEEECCCceEEEEEcCCC---CCe
Confidence 34677787776655433221 11111112223 67888887753 358899998766433211111 112
Q ss_pred eeEEEe--CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeC
Q 014195 165 LGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDL 205 (429)
Q Consensus 165 ~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~ 205 (429)
.+++.. ++.+|+.+.. ...+.+||+.+.+....
T Consensus 215 ~~~~~~~~~~~l~~~~~~--------~~~i~~~d~~~~~~~~~ 249 (433)
T 3bws_A 215 KILLYDPIRDLVYCSNWI--------SEDISVIDRKTKLEIRK 249 (433)
T ss_dssp EEEEEETTTTEEEEEETT--------TTEEEEEETTTTEEEEE
T ss_pred eEEEEcCCCCEEEEEecC--------CCcEEEEECCCCcEEEE
Confidence 233333 5577777643 34788999988765443
No 37
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.91 E-value=0.21 Score=45.81 Aligned_cols=238 Identities=12% Similarity=0.140 Sum_probs=119.3
Q ss_pred cccCCCeEEccCCCCCccCCcEEEE-CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEeCCEE
Q 014195 96 PAPELKWEKMKAAPVPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYI 174 (429)
Q Consensus 96 d~~~~~W~~~~~~p~~R~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~l 174 (429)
.....+|+.+.. +....-.++... .+.+|++|- .+ .+++-+-...+|+.+............++...++.+
T Consensus 21 ~d~g~~W~~~~~-~~~~~~~~v~~~~~~~~~~~G~-~g------~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~ 92 (327)
T 2xbg_A 21 ALDYNPWEAIQL-PTTATILDMSFIDRHHGWLVGV-NA------TLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEG 92 (327)
T ss_dssp BCSSCCEEEEEC-SCSSCEEEEEESSSSCEEEEET-TT------EEEEESSTTSSCEECCCCCSCCCCEEEEEEEETTEE
T ss_pred CCCCCCceEeec-CCCCcEEEEEECCCCcEEEEcC-CC------eEEEeCCCCCCCeECCCCCCCCCccEEEEEecCCeE
Confidence 345568988763 332222233332 456788652 21 244443345689987532111122334555567889
Q ss_pred EEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCC-CCCCCceEEE-ECCEEEEEeCCCCCCCCccccceEeeeecCCcc
Q 014195 175 YVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLP-VPRYAPATQL-WRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPL 252 (429)
Q Consensus 175 yv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p-~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~ 252 (429)
|++|- ...+++-+-.-.+|+.+.... .+-....++. -++++|+.|... ..|.- +..
T Consensus 93 ~~~g~---------~g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g--------~v~~S-----~Dg 150 (327)
T 2xbg_A 93 WIVGE---------PPIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVG--------AIYRT-----KDS 150 (327)
T ss_dssp EEEEE---------TTEEEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTC--------CEEEE-----SST
T ss_pred EEEEC---------CCeEEEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCc--------cEEEE-----cCC
Confidence 88752 224554433467899986431 2222233433 468888887421 12221 123
Q ss_pred ccceeeccCCCCCCCceeEEEe-CCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-C-CCCeEEcCCCCCCC
Q 014195 253 EKEWRTEIPIPRGGPHRACVVV-DDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-D-EMKWKVLPSMPKPD 329 (429)
Q Consensus 253 ~~~W~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~-~~~W~~~~~~~~~r 329 (429)
-.+|+.......... +.++.. ++.++++|-. + .+|+-+ . ...|+.+.. +.+.
T Consensus 151 G~tW~~~~~~~~~~~-~~~~~~~~~~~~~~g~~-G----------------------~~~~S~d~gG~tW~~~~~-~~~~ 205 (327)
T 2xbg_A 151 GKNWQALVQEAIGVM-RNLNRSPSGEYVAVSSR-G----------------------SFYSTWEPGQTAWEPHNR-TTSR 205 (327)
T ss_dssp TSSEEEEECSCCCCE-EEEEECTTSCEEEEETT-S----------------------SEEEEECTTCSSCEEEEC-CSSS
T ss_pred CCCCEEeecCCCcce-EEEEEcCCCcEEEEECC-C----------------------cEEEEeCCCCCceeECCC-CCCC
Confidence 567887643222222 233333 5566666532 1 256553 3 689999854 2233
Q ss_pred CCcceeEEEECCEEEEEcccCCCCCCccceeeeCcEEEEecC-CCCeEEecc--cCcceeeeeeEE-ECCEEEEEcc
Q 014195 330 SHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLN-TLKWHVIGK--LPYRVKTTLAGY-WNGWLYFTSG 402 (429)
Q Consensus 330 ~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~-~~~W~~v~~--lp~~r~~~~~~~-~~~~i~v~GG 402 (429)
..... +...++.+|+.+.. + .+++.+.+ ..+|+.+.. ++.....+.+.. .++.+|++|+
T Consensus 206 ~~~~~-~~~~~g~~~~~~~~---G----------~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~ 268 (327)
T 2xbg_A 206 RLHNM-GFTPDGRLWMIVNG---G----------KIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG 268 (327)
T ss_dssp CEEEE-EECTTSCEEEEETT---T----------EEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES
T ss_pred cccee-EECCCCCEEEEeCC---c----------eEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC
Confidence 32222 12346788877642 1 34554333 568987642 333222233322 2578888865
No 38
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.89 E-value=0.11 Score=45.82 Aligned_cols=113 Identities=10% Similarity=0.026 Sum_probs=75.2
Q ss_pred CeEEccCCCCCccC--CcEEEECCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEeCCEEEEEe
Q 014195 101 KWEKMKAAPVPRLD--GAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVT 178 (429)
Q Consensus 101 ~W~~~~~~p~~R~~--~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~G 178 (429)
.++.+...|..+.. .++...++.||+..|..+. +.+.++|+++.+=..--+++. .-...+++..+++||+..
T Consensus 30 ~~~vv~~~phd~~~ftqGL~~~~~~LyestG~~g~----S~v~~vD~~Tgkv~~~~~l~~--~~FgeGit~~g~~ly~lt 103 (262)
T 3nol_A 30 DYQIVHSYPHDTKAFTEGFFYRNGYFYESTGLNGR----SSIRKVDIESGKTLQQIELGK--RYFGEGISDWKDKIVGLT 103 (262)
T ss_dssp EEEEEEEEECCTTCEEEEEEEETTEEEEEEEETTE----EEEEEECTTTCCEEEEEECCT--TCCEEEEEEETTEEEEEE
T ss_pred ceEEEEEecCCCCcccceEEEECCEEEEECCCCCC----ceEEEEECCCCcEEEEEecCC--ccceeEEEEeCCEEEEEE
Confidence 34455555544333 4455558899999997653 458899999998655434443 344567888999999995
Q ss_pred CeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEEECCEEEEEeC
Q 014195 179 GQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGG 229 (429)
Q Consensus 179 G~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG 229 (429)
.. .+.+++||+++.+-.. .++.+-.+.+++.-+++||+.-|
T Consensus 104 w~--------~~~v~v~D~~t~~~~~--ti~~~~eG~glt~dg~~L~~SdG 144 (262)
T 3nol_A 104 WK--------NGLGFVWNIRNLRQVR--SFNYDGEGWGLTHNDQYLIMSDG 144 (262)
T ss_dssp SS--------SSEEEEEETTTCCEEE--EEECSSCCCCEEECSSCEEECCS
T ss_pred ee--------CCEEEEEECccCcEEE--EEECCCCceEEecCCCEEEEECC
Confidence 42 5689999998876433 22223355666666777888755
No 39
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.85 E-value=0.073 Score=48.12 Aligned_cols=99 Identities=14% Similarity=0.122 Sum_probs=50.1
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 199 (429)
++.+++.|+.++ .+.+||..+.+-... +... ...-.++... ++.+++.|+.+ ..+..||+.+
T Consensus 76 ~~~~l~s~~~d~------~i~vwd~~~~~~~~~--~~~~-~~~v~~~~~~~~~~~l~s~~~d--------~~i~iwd~~~ 138 (312)
T 4ery_A 76 DSNLLVSASDDK------TLKIWDVSSGKCLKT--LKGH-SNYVFCCNFNPQSNLIVSGSFD--------ESVRIWDVKT 138 (312)
T ss_dssp TSSEEEEEETTS------EEEEEETTTCCEEEE--EECC-SSCEEEEEECSSSSEEEEEETT--------SCEEEEETTT
T ss_pred CCCEEEEECCCC------EEEEEECCCCcEEEE--EcCC-CCCEEEEEEcCCCCEEEEEeCC--------CcEEEEECCC
Confidence 456777777543 478899887754321 1110 0111222222 45566666643 3577888887
Q ss_pred CceEeCCCCCCCCCCceEEEE--CCEEEEEeCCCCCCCCccccceE
Q 014195 200 KKWQDLPPLPVPRYAPATQLW--RGRLHVMGGSGENRYTPEVDHWS 243 (429)
Q Consensus 200 ~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~ 243 (429)
.+-... ++.....-..+.+ ++++++.|+.++ .+..|+
T Consensus 139 ~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~wd 177 (312)
T 4ery_A 139 GKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYDG-----LCRIWD 177 (312)
T ss_dssp CCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEE
T ss_pred CEEEEE--ecCCCCcEEEEEEcCCCCEEEEEeCCC-----cEEEEE
Confidence 653321 1111111122222 566777777653 455666
No 40
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.82 E-value=0.021 Score=54.72 Aligned_cols=218 Identities=9% Similarity=0.069 Sum_probs=107.7
Q ss_pred EEEECCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCCceeEEEe
Q 014195 117 AIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLD 196 (429)
Q Consensus 117 ~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd 196 (429)
+...++..++.|+.++ .+.+||..+.+-...-... .........++.+++.|+.+ ..+..||
T Consensus 138 ~~~~d~~~l~~g~~dg------~i~iwd~~~~~~~~~~~~h----~~~v~~l~~~~~~l~sg~~d--------g~i~vwd 199 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDN------TIKIWDKNTLECKRILTGH----TGSVLCLQYDERVIITGSSD--------STVRVWD 199 (435)
T ss_dssp EEECCSSEEEEEESSS------CEEEEESSSCCEEEEECCC----SSCEEEEECCSSEEEEEETT--------SCEEEEE
T ss_pred EEEECCCEEEEEeCCC------eEEEEeCCCCeEEEEEcCC----CCcEEEEEECCCEEEEEcCC--------CeEEEEE
Confidence 3444777788887654 4788998876643321111 11222233366677777643 4677888
Q ss_pred CCCCceEeCCCCCCCCCCceEEEECCEEEEEeCCCCCCCCccccceEeeeecCCccccceeeccCCCCCCCceeEEEeCC
Q 014195 197 TETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDD 276 (429)
Q Consensus 197 ~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~ 276 (429)
..+.+-... +......-..+...+..++.|+.++ .+..|++. .. ........+........++..++
T Consensus 200 ~~~~~~~~~--~~~h~~~v~~l~~~~~~l~s~s~dg-----~i~vwd~~-----~~-~~~~~~~~~~~~~~~v~~~~~~~ 266 (435)
T 1p22_A 200 VNTGEMLNT--LIHHCEAVLHLRFNNGMMVTCSKDR-----SIAVWDMA-----SP-TDITLRRVLVGHRAAVNVVDFDD 266 (435)
T ss_dssp SSSCCEEEE--ECCCCSCEEEEECCTTEEEEEETTS-----CEEEEECS-----SS-SCCEEEEEECCCSSCEEEEEEET
T ss_pred CCCCcEEEE--EcCCCCcEEEEEEcCCEEEEeeCCC-----cEEEEeCC-----CC-CCceeeeEecCCCCcEEEEEeCC
Confidence 887754322 1111222233344566777777653 46667642 11 11110011111111123444466
Q ss_pred EEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCCCCCCCCCcceeEEEECCEEEEEcccCCCCCC
Q 014195 277 RLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPT 355 (429)
Q Consensus 277 ~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~ 355 (429)
..++.|+.++. +..+| .+.+- +..+...... ...+..++..++.|+.++
T Consensus 267 ~~l~s~~~dg~----------------------i~vwd~~~~~~--~~~~~~~~~~--v~~~~~~~~~l~~g~~dg---- 316 (435)
T 1p22_A 267 KYIVSASGDRT----------------------IKVWNTSTCEF--VRTLNGHKRG--IACLQYRDRLVVSGSSDN---- 316 (435)
T ss_dssp TEEEEEETTSE----------------------EEEEETTTCCE--EEEEECCSSC--EEEEEEETTEEEEEETTS----
T ss_pred CEEEEEeCCCe----------------------EEEEECCcCcE--EEEEcCCCCc--EEEEEeCCCEEEEEeCCC----
Confidence 67777766432 55565 43322 1111111111 223445677777777543
Q ss_pred ccceeeeCcEEEEecCCCCeEEecccCcceeeeeeEEECCEEEEEcccCC
Q 014195 356 TKKMVLVGEIFQFNLNTLKWHVIGKLPYRVKTTLAGYWNGWLYFTSGQRD 405 (429)
Q Consensus 356 ~~~~~~~~~i~~yd~~~~~W~~v~~lp~~r~~~~~~~~~~~i~v~GG~~~ 405 (429)
.|.+||..+.+-.. .+........++..+++.++.|+.+.
T Consensus 317 --------~i~iwd~~~~~~~~--~~~~h~~~v~~~~~~~~~l~sg~~dg 356 (435)
T 1p22_A 317 --------TIRLWDIECGACLR--VLEGHEELVRCIRFDNKRIVSGAYDG 356 (435)
T ss_dssp --------CEEEEETTTCCEEE--EECCCSSCEEEEECCSSEEEEEETTS
T ss_pred --------eEEEEECCCCCEEE--EEeCCcCcEEEEEecCCEEEEEeCCC
Confidence 68889988764322 22211112223334777777777543
No 41
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.77 E-value=0.32 Score=44.60 Aligned_cols=239 Identities=12% Similarity=0.076 Sum_probs=116.2
Q ss_pred ccCCCeEEccCC-CCCc-cCCcEEEECCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEE-EeCCE
Q 014195 97 APELKWEKMKAA-PVPR-LDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMV-TDGRY 173 (429)
Q Consensus 97 ~~~~~W~~~~~~-p~~R-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~-~~~~~ 173 (429)
....+|+.+... +.+. ...++...++.+|++|- .+ .+++-+-.-.+|+.+..... .+-....++ ..++.
T Consensus 63 DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~-~g------~i~~S~DgG~tW~~~~~~~~-~~~~~~~i~~~~~~~ 134 (327)
T 2xbg_A 63 DGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGE-PP------IMLHTTDGGQSWSQIPLDPK-LPGSPRLIKALGNGS 134 (327)
T ss_dssp STTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEE-TT------EEEEESSTTSSCEECCCCTT-CSSCEEEEEEEETTE
T ss_pred CCCCCCeECCCCCCCCCccEEEEEecCCeEEEEEC-CC------eEEEECCCCCCceECccccC-CCCCeEEEEEECCCC
Confidence 344589987532 2222 22334444678888752 11 24443333578998764321 011123333 34678
Q ss_pred EEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEEE-CCEEEEEeCCCCCCCCccccceEeeeecCCcc
Q 014195 174 IYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW-RGRLHVMGGSGENRYTPEVDHWSLAVKDGKPL 252 (429)
Q Consensus 174 lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~ 252 (429)
+|+.|. ...+++-+-.-.+|+.+.... +...+.++.. ++++|++|- .+ ..|... |..
T Consensus 135 ~~~~~~---------~g~v~~S~DgG~tW~~~~~~~-~~~~~~~~~~~~~~~~~~g~-~G-------~~~~S~----d~g 192 (327)
T 2xbg_A 135 AEMITN---------VGAIYRTKDSGKNWQALVQEA-IGVMRNLNRSPSGEYVAVSS-RG-------SFYSTW----EPG 192 (327)
T ss_dssp EEEEET---------TCCEEEESSTTSSEEEEECSC-CCCEEEEEECTTSCEEEEET-TS-------SEEEEE----CTT
T ss_pred EEEEeC---------CccEEEEcCCCCCCEEeecCC-CcceEEEEEcCCCcEEEEEC-CC-------cEEEEe----CCC
Confidence 888764 123555444467899885422 2233344333 556766652 21 122211 122
Q ss_pred ccceeeccCCCCCCCceeEEE-eCCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEe-C-CCCCeEEcCCCCCCC
Q 014195 253 EKEWRTEIPIPRGGPHRACVV-VDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYML-D-DEMKWKVLPSMPKPD 329 (429)
Q Consensus 253 ~~~W~~~~~~p~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-d-~~~~W~~~~~~~~~r 329 (429)
..+|+......... .+.++. -++.+|+.+.. + .++.. + ...+|+.+...+.+.
T Consensus 193 G~tW~~~~~~~~~~-~~~~~~~~~g~~~~~~~~-G----------------------~~~~s~~D~G~tW~~~~~~~~~~ 248 (327)
T 2xbg_A 193 QTAWEPHNRTTSRR-LHNMGFTPDGRLWMIVNG-G----------------------KIAFSDPDNSENWGELLSPLRRN 248 (327)
T ss_dssp CSSCEEEECCSSSC-EEEEEECTTSCEEEEETT-T----------------------EEEEEETTEEEEECCCBCTTSSC
T ss_pred CCceeECCCCCCCc-cceeEECCCCCEEEEeCC-c----------------------eEEEecCCCCCeeEeccCCcccC
Confidence 46788764322222 223333 36678877642 1 14544 2 367898875321222
Q ss_pred CCcceeEEE-ECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEEeccc-CcceeeeeeE-EECCEEEEEcc
Q 014195 330 SHIEFAWVL-VNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIGKL-PYRVKTTLAG-YWNGWLYFTSG 402 (429)
Q Consensus 330 ~~~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v~~l-p~~r~~~~~~-~~~~~i~v~GG 402 (429)
...-.+++. .++.+|+.|+.. .+++-.-...+|+.+... +.+...+.+. .-++.++++|.
T Consensus 249 ~~~~~~v~~~~~~~~~~~g~~g-------------~i~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~ 311 (327)
T 2xbg_A 249 SVGFLDLAYRTPNEVWLAGGAG-------------ALLCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQ 311 (327)
T ss_dssp CSCEEEEEESSSSCEEEEESTT-------------CEEEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECS
T ss_pred CcceEEEEecCCCEEEEEeCCC-------------eEEEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcC
Confidence 111122222 257888887631 344333345799988532 2222223333 34667666654
No 42
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.74 E-value=0.06 Score=49.31 Aligned_cols=100 Identities=10% Similarity=0.015 Sum_probs=51.5
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 199 (429)
++..++.|+.++ .+.+||..+.+-...-.... ..-.+++.. +++.++.|+.+ ..+..||..+
T Consensus 133 dg~~l~~g~~dg------~v~i~~~~~~~~~~~~~~~~---~~v~~~~~spdg~~lasg~~d--------g~i~iwd~~~ 195 (321)
T 3ow8_A 133 DSQYLATGTHVG------KVNIFGVESGKKEYSLDTRG---KFILSIAYSPDGKYLASGAID--------GIINIFDIAT 195 (321)
T ss_dssp TSSEEEEECTTS------EEEEEETTTCSEEEEEECSS---SCEEEEEECTTSSEEEEEETT--------SCEEEEETTT
T ss_pred CCCEEEEEcCCC------cEEEEEcCCCceeEEecCCC---ceEEEEEECCCCCEEEEEcCC--------CeEEEEECCC
Confidence 556777776543 47788887765332111111 112233332 55667777643 3577889887
Q ss_pred CceEeCCCCCCCCCC-ceEE-EECCEEEEEeCCCCCCCCccccceEe
Q 014195 200 KKWQDLPPLPVPRYA-PATQ-LWRGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 200 ~~W~~~~~~p~~r~~-~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
.+-... +...... .+++ .-++++++.|+.++ .+..|++
T Consensus 196 ~~~~~~--~~~h~~~v~~l~~spd~~~l~s~s~dg-----~i~iwd~ 235 (321)
T 3ow8_A 196 GKLLHT--LEGHAMPIRSLTFSPDSQLLVTASDDG-----YIKIYDV 235 (321)
T ss_dssp TEEEEE--ECCCSSCCCEEEECTTSCEEEEECTTS-----CEEEEET
T ss_pred CcEEEE--EcccCCceeEEEEcCCCCEEEEEcCCC-----eEEEEEC
Confidence 754321 1111111 1222 22677888887653 4666763
No 43
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.74 E-value=0.1 Score=46.49 Aligned_cols=159 Identities=11% Similarity=0.006 Sum_probs=88.5
Q ss_pred eeeEEEeC-CEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEEECCEEEEEeCCCCCCCCccccce
Q 014195 164 HLGMVTDG-RYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHW 242 (429)
Q Consensus 164 ~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~ 242 (429)
-+++++.+ +.||+..|..+ .+.+.++|+.+++=...-+++.......++..+++||+..-.+ ..+.++
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~------~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~-----~~v~vi 91 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYG------RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLK-----NIGFIY 91 (266)
T ss_dssp EEEEEECSTTEEEEEECSTT------TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTC-----SEEEEE
T ss_pred cccEEEeCCCeEEEECCCCC------CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecC-----CEEEEE
Confidence 35677665 89999877422 4689999999988665434444334456777789999996533 223333
Q ss_pred EeeeecCCccccceeeccCCCCCCCceeEEEeCCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCe-E
Q 014195 243 SLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKW-K 320 (429)
Q Consensus 243 ~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W-~ 320 (429)
+ +.+.+=...-+.+ ...+.+.+.-++++|+.-|. +.++.+| .+.+- .
T Consensus 92 D-------~~t~~v~~~i~~g-~~~g~glt~Dg~~l~vs~gs-----------------------~~l~viD~~t~~v~~ 140 (266)
T 2iwa_A 92 D-------RRTLSNIKNFTHQ-MKDGWGLATDGKILYGSDGT-----------------------SILYEIDPHTFKLIK 140 (266)
T ss_dssp E-------TTTTEEEEEEECC-SSSCCEEEECSSSEEEECSS-----------------------SEEEEECTTTCCEEE
T ss_pred E-------CCCCcEEEEEECC-CCCeEEEEECCCEEEEECCC-----------------------CeEEEEECCCCcEEE
Confidence 3 3332211111112 12233455555669987652 1478887 55432 2
Q ss_pred EcC--CCCCCCCCcceeEEEECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEE
Q 014195 321 VLP--SMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHV 377 (429)
Q Consensus 321 ~~~--~~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~ 377 (429)
.++ ..+.|..... .+...+++||+--.. .++|.+.|+++.+-..
T Consensus 141 ~I~Vg~~~~p~~~~n-ele~~dg~lyvn~~~------------~~~V~vID~~tg~V~~ 186 (266)
T 2iwa_A 141 KHNVKYNGHRVIRLN-ELEYINGEVWANIWQ------------TDCIARISAKDGTLLG 186 (266)
T ss_dssp EEECEETTEECCCEE-EEEEETTEEEEEETT------------SSEEEEEETTTCCEEE
T ss_pred EEEECCCCcccccce-eEEEECCEEEEecCC------------CCeEEEEECCCCcEEE
Confidence 222 1111211111 223448888865422 2489999999886433
No 44
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.72 E-value=0.15 Score=48.76 Aligned_cols=242 Identities=13% Similarity=0.062 Sum_probs=114.5
Q ss_pred cccccccccCCCeEEccCCCCCccCCcEEEECCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEE
Q 014195 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT 169 (429)
Q Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~ 169 (429)
..+..+|..+.+- +..+......-.+....+.+++.|+.++ .+.+||..+++-...-.... ..-.++..
T Consensus 139 g~i~vwd~~~~~~--~~~~~~h~~~v~~~~~~~~~l~s~~~dg------~i~vwd~~~~~~~~~~~~h~---~~v~~~~~ 207 (445)
T 2ovr_B 139 NTLKVWSAVTGKC--LRTLVGHTGGVWSSQMRDNIIISGSTDR------TLKVWNAETGECIHTLYGHT---STVRCMHL 207 (445)
T ss_dssp SCEEEEETTTCCE--EEECCCCSSCEEEEEEETTEEEEEETTS------CEEEEETTTTEEEEEECCCS---SCEEEEEE
T ss_pred CcEEEEECCCCcE--EEEEcCCCCCEEEEEecCCEEEEEeCCC------eEEEEECCcCcEEEEECCCC---CcEEEEEe
Confidence 3455566554432 2222222222222333455677777654 37889988875433211111 11233444
Q ss_pred eCCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEEECCEEEEEeCCCCCCCCccccceEeeeecC
Q 014195 170 DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDG 249 (429)
Q Consensus 170 ~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~ 249 (429)
.++ .++.|+. ...+..||..+.+-... +........++..+++.++.|+.++ .+..|+.
T Consensus 208 ~~~-~l~s~s~--------dg~i~~wd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~dg-----~i~iwd~----- 266 (445)
T 2ovr_B 208 HEK-RVVSGSR--------DATLRVWDIETGQCLHV--LMGHVAAVRCVQYDGRRVVSGAYDF-----MVKVWDP----- 266 (445)
T ss_dssp ETT-EEEEEET--------TSEEEEEESSSCCEEEE--EECCSSCEEEEEECSSCEEEEETTS-----CEEEEEG-----
T ss_pred cCC-EEEEEeC--------CCEEEEEECCCCcEEEE--EcCCcccEEEEEECCCEEEEEcCCC-----EEEEEEC-----
Confidence 444 4556653 34678888887653321 1111222234445777888877653 4566663
Q ss_pred CccccceeeccCCCCCCCceeEEEeCCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCCCCCC
Q 014195 250 KPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKP 328 (429)
Q Consensus 250 d~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~~~~ 328 (429)
.+.+ ....+........++..++..++.|+.++. +..+| .+.+-. ..+...
T Consensus 267 --~~~~--~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~----------------------i~i~d~~~~~~~--~~~~~~ 318 (445)
T 2ovr_B 267 --ETET--CLHTLQGHTNRVYSLQFDGIHVVSGSLDTS----------------------IRVWDVETGNCI--HTLTGH 318 (445)
T ss_dssp --GGTE--EEEEECCCSSCEEEEEECSSEEEEEETTSC----------------------EEEEETTTCCEE--EEECCC
T ss_pred --CCCc--EeEEecCCCCceEEEEECCCEEEEEeCCCe----------------------EEEEECCCCCEE--EEEcCC
Confidence 2221 111111111122444457777777876533 55665 433221 111111
Q ss_pred CCCcceeEEEECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEEecccCc-ceeeeeeEEECCEEEEEcccCC
Q 014195 329 DSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIGKLPY-RVKTTLAGYWNGWLYFTSGQRD 405 (429)
Q Consensus 329 r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v~~lp~-~r~~~~~~~~~~~i~v~GG~~~ 405 (429)
... ......++..++.|+.++ .+.+||..+.+-...-..+. ......++..++.+++.|+.+.
T Consensus 319 ~~~--v~~~~~~~~~l~~~~~dg------------~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg 382 (445)
T 2ovr_B 319 QSL--TSGMELKDNILVSGNADS------------TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDG 382 (445)
T ss_dssp CSC--EEEEEEETTEEEEEETTS------------CEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTS
T ss_pred ccc--EEEEEEeCCEEEEEeCCC------------eEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCC
Confidence 111 122444566777776542 68889987765322211111 1122233445667777766543
No 45
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.72 E-value=0.29 Score=43.41 Aligned_cols=170 Identities=9% Similarity=0.011 Sum_probs=79.2
Q ss_pred cceeeeecCCCcccceeeeeeecCCCCe-EEecCC-CCCCCcceeeeecCCCCcCcccccccccccccCCCeEEccCCCC
Q 014195 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-IILPNN-GPQKGENIGVKTKKDVVPKRILPATFQDLPAPELKWEKMKAAPV 110 (429)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~yd~~~~~-~~~p~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 110 (429)
++.||+....+ +.+..||+. .. ...+.. ....-.+++................+..+|+. .+.+... +|.
T Consensus 25 ~g~l~v~~~~~-----~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~-~~~ 96 (299)
T 2z2n_A 25 KGKVWITQHKA-----NMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYT-LPN 96 (299)
T ss_dssp TSCEEEEETTT-----TEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEE-CSS
T ss_pred CCCEEEEecCC-----CcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEe-CCC
Confidence 56788754322 257888888 55 333211 11111122221111111111112346677765 4444433 221
Q ss_pred -CccCCcEEEE-CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCC
Q 014195 111 -PRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRG 187 (429)
Q Consensus 111 -~R~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~ 187 (429)
...-++++.. ++.+|+....+ ..+.+||+ +++...... +.. ...-.+++.. ++++|+..-.
T Consensus 97 ~~~~~~~i~~~~~g~l~v~~~~~------~~i~~~d~-~g~~~~~~~-~~~-~~~~~~i~~~~~g~l~v~~~~------- 160 (299)
T 2z2n_A 97 PDSAPYGITEGPNGDIWFTEMNG------NRIGRITD-DGKIREYEL-PNK-GSYPSFITLGSDNALWFTENQ------- 160 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTT------TEEEEECT-TCCEEEEEC-SST-TCCEEEEEECTTSCEEEEETT-------
T ss_pred cCCCceeeEECCCCCEEEEecCC------ceEEEECC-CCCEEEecC-CCC-CCCCceEEEcCCCCEEEEeCC-------
Confidence 1112233333 56888865321 24888998 665554321 111 1223444444 5688886421
Q ss_pred CCceeEEEeCCCCceEeCCCCCCCCCC-ceEEEE-CCEEEEEeC
Q 014195 188 PTAHTFVLDTETKKWQDLPPLPVPRYA-PATQLW-RGRLHVMGG 229 (429)
Q Consensus 188 ~~~~~~~yd~~t~~W~~~~~~p~~r~~-~~~~~~-~~~lyv~GG 229 (429)
...+++||+ +.+..... ++..... ..++.- +++||+...
T Consensus 161 -~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~ 201 (299)
T 2z2n_A 161 -NNAIGRITE-SGDITEFK-IPTPASGPVGITKGNDDALWFVEI 201 (299)
T ss_dssp -TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEET
T ss_pred -CCEEEEEcC-CCcEEEee-CCCCCCcceeEEECCCCCEEEEcc
Confidence 357899999 77766541 1111111 223332 567888753
No 46
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.67 E-value=0.079 Score=48.82 Aligned_cols=102 Identities=14% Similarity=0.101 Sum_probs=48.6
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCce--eeCCCCCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCCceeEEEeCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTW--GGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W--~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~ 198 (429)
++..++.||.++ .+.+||..+..- .....+..............++. ++.|+. ...+..||..
T Consensus 108 ~~~~l~s~~~d~------~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~--------d~~i~~wd~~ 172 (340)
T 1got_B 108 SGNYVACGGLDN------ICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSG--------DTTCALWDIE 172 (340)
T ss_dssp TSSEEEEEETTC------EEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEET--------TSCEEEEETT
T ss_pred CCCEEEEEeCCC------eEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEEC--------CCcEEEEECC
Confidence 556777777653 477888876531 11111111001111112223555 444443 3467788988
Q ss_pred CCceEeCCCCCCCCCCceEEE--ECCEEEEEeCCCCCCCCccccceEe
Q 014195 199 TKKWQDLPPLPVPRYAPATQL--WRGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 199 t~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
+.+-... +......-..+. -++++++.|+.++ .+..|++
T Consensus 173 ~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sg~~d~-----~v~~wd~ 213 (340)
T 1got_B 173 TGQQTTT--FTGHTGDVMSLSLAPDTRLFVSGACDA-----SAKLWDV 213 (340)
T ss_dssp TTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEET
T ss_pred CCcEEEE--EcCCCCceEEEEECCCCCEEEEEeCCC-----cEEEEEC
Confidence 7654322 111111111222 2567888887653 4666763
No 47
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.67 E-value=0.01 Score=55.48 Aligned_cols=104 Identities=13% Similarity=0.162 Sum_probs=52.0
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 199 (429)
++.+++.|+.++ .+.+||..++.|..+..+.... ..-.+++.. ++.+++.|+.+ ..+..||..+
T Consensus 22 ~g~~l~~~~~d~------~i~iw~~~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~s~d--------~~v~vwd~~~ 86 (377)
T 3dwl_C 22 QRTEFVTTTATN------QVELYEQDGNGWKHARTFSDHD-KIVTCVDWAPKSNRIVTCSQD--------RNAYVYEKRP 86 (377)
T ss_dssp SSSEEECCCSSS------CBCEEEEETTEEEECCCBCCCS-SCEEEEEECTTTCCEEEEETT--------SSEEEC----
T ss_pred CCCEEEEecCCC------EEEEEEccCCceEEEEEEecCC-ceEEEEEEeCCCCEEEEEeCC--------CeEEEEEcCC
Confidence 456677776543 3678888888887776665421 122333333 45667776642 3577888887
Q ss_pred Cc-eEeCCCCCCCCCCceEEEE--CCEEEEEeCCCCCCCCccccceEe
Q 014195 200 KK-WQDLPPLPVPRYAPATQLW--RGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 200 ~~-W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
.+ |.....+.........+.+ ++++++.|+.++ .+..|++
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~ 129 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGAR-----VISVCYF 129 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSS-----CEEECCC
T ss_pred CCceeeeeEecccCCceEEEEECCCCCEEEEEecCC-----eEEEEEE
Confidence 76 4433222211112222222 566677776542 3555654
No 48
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.61 E-value=0.2 Score=43.98 Aligned_cols=90 Identities=16% Similarity=0.066 Sum_probs=45.2
Q ss_pred CCEEEE-EeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCC
Q 014195 121 KNLLYV-FAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (429)
Q Consensus 121 ~~~iyv-~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~ 198 (429)
++.+|+ .... ...+.+||+.+........... ..-.++++. ++.||+... ...+.+||+.
T Consensus 34 ~g~l~v~~~~~------~~~i~~~~~~~~~~~~~~~~~~---~~p~~i~~~~~g~l~v~~~---------~~~i~~~d~~ 95 (270)
T 1rwi_B 34 AGNVYVTSEGM------YGRVVKLATGSTGTTVLPFNGL---YQPQGLAVDGAGTVYVTDF---------NNRVVTLAAG 95 (270)
T ss_dssp TCCEEEEECSS------SCEEEEECC-----EECCCCSC---CSCCCEEECTTCCEEEEET---------TTEEEEECTT
T ss_pred CCCEEEEccCC------CCcEEEecCCCcccceEeeCCc---CCcceeEECCCCCEEEEcC---------CCEEEEEeCC
Confidence 467888 4322 1347889987766554432211 112344444 567888753 2468889998
Q ss_pred CCceEeCCCCCCCCCCceEEEE-CCEEEEEeC
Q 014195 199 TKKWQDLPPLPVPRYAPATQLW-RGRLHVMGG 229 (429)
Q Consensus 199 t~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG 229 (429)
+.....+..... ..-..++.. +++||+...
T Consensus 96 ~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~ 126 (270)
T 1rwi_B 96 SNNQTVLPFDGL-NYPEGLAVDTQGAVYVADR 126 (270)
T ss_dssp CSCCEECCCCSC-SSEEEEEECTTCCEEEEEG
T ss_pred CceEeeeecCCc-CCCcceEECCCCCEEEEEC
Confidence 876554432111 111233332 577888753
No 49
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.59 E-value=0.42 Score=43.56 Aligned_cols=73 Identities=7% Similarity=-0.069 Sum_probs=40.9
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCCceeEEEeCCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 200 (429)
++.+|+.............++++|+.+.+-...-+... .-...++...++.+|+.+.. ...+..+|+.+.
T Consensus 52 g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~v~~~~--------~~~v~~~d~~~~ 121 (353)
T 3vgz_A 52 ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL--KPFGATINNTTQTLWFGNTV--------NSAVTAIDAKTG 121 (353)
T ss_dssp TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS--CCCSEEEETTTTEEEEEETT--------TTEEEEEETTTC
T ss_pred CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC--CcceEEECCCCCEEEEEecC--------CCEEEEEeCCCC
Confidence 34777766432221124569999998886543322222 11122222334568887652 357899999887
Q ss_pred ceE
Q 014195 201 KWQ 203 (429)
Q Consensus 201 ~W~ 203 (429)
+-.
T Consensus 122 ~~~ 124 (353)
T 3vgz_A 122 EVK 124 (353)
T ss_dssp CEE
T ss_pred eeE
Confidence 643
No 50
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.58 E-value=0.023 Score=50.36 Aligned_cols=241 Identities=7% Similarity=-0.059 Sum_probs=113.1
Q ss_pred cccccccccccCCCeEEccCCCCCccCCcEEEE-CCEEEEEeccCCCCceeeeEEEEECCC-CceeeCCCCCCCCcccee
Q 014195 88 LPATFQDLPAPELKWEKMKAAPVPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTD-NTWGGRFDMPREMAHSHL 165 (429)
Q Consensus 88 ~~~~~~~~d~~~~~W~~~~~~p~~R~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~-~~W~~~~~~~~~~~r~~~ 165 (429)
....+..+|..+++...+...+. .-.+++.. +++.+++++ + ..++++|..+ .+...+...... .....
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~--~v~~~~~spdg~~l~~~~-~------~~i~~~d~~~~~~~~~~~~~~~~-~~~~~ 89 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPE--LFEAPNWSPDGKYLLLNS-E------GLLYRLSLAGDPSPEKVDTGFAT-ICNND 89 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESS--CCEEEEECTTSSEEEEEE-T------TEEEEEESSSCCSCEECCCTTCC-CBCSC
T ss_pred cceeEEEEeCCCCceeeeccCCc--ceEeeEECCCCCEEEEEc-C------CeEEEEeCCCCCCceEecccccc-ccccc
Confidence 44566677777665544433211 11122222 455555554 1 2589999998 777666433321 11111
Q ss_pred eEEEeCCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEEE-CC-EEEEEeCCCCCCCCccccceE
Q 014195 166 GMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW-RG-RLHVMGGSGENRYTPEVDHWS 243 (429)
Q Consensus 166 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~ 243 (429)
....-+++.+++++..... ...++.+|..+.+-..+..... ...+... ++ .|++.++.+ .....|.
T Consensus 90 ~~~spdg~~l~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~~~-----~~~~l~~ 157 (297)
T 2ojh_A 90 HGISPDGALYAISDKVEFG----KSAIYLLPSTGGTPRLMTKNLP---SYWHGWSPDGKSFTYCGIRD-----QVFDIYS 157 (297)
T ss_dssp CEECTTSSEEEEEECTTTS----SCEEEEEETTCCCCEECCSSSS---EEEEEECTTSSEEEEEEEET-----TEEEEEE
T ss_pred eEECCCCCEEEEEEeCCCC----cceEEEEECCCCceEEeecCCC---ccceEECCCCCEEEEEECCC-----CceEEEE
Confidence 1222245555554432221 5689999988877666543321 1122222 34 455454433 2245565
Q ss_pred eeeecCCccccceeeccCCCCCCCceeEEEeCCE-EEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEE
Q 014195 244 LAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDR-LLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKV 321 (429)
Q Consensus 244 ~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~ 321 (429)
+. ..+.....+...+... .......+++ |++.+..++. ..+|.++ .......
T Consensus 158 ~~-----~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~--------------------~~i~~~~~~~~~~~~ 211 (297)
T 2ojh_A 158 MD-----IDSGVETRLTHGEGRN-DGPDYSPDGRWIYFNSSRTGQ--------------------MQIWRVRVDGSSVER 211 (297)
T ss_dssp EE-----TTTCCEEECCCSSSCE-EEEEECTTSSEEEEEECTTSS--------------------CEEEEEETTSSCEEE
T ss_pred EE-----CCCCcceEcccCCCcc-ccceECCCCCEEEEEecCCCC--------------------ccEEEECCCCCCcEE
Confidence 43 3444444333222211 1112223555 4444332221 2478887 6666666
Q ss_pred cCCCCCCCCCcceeEEEECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEEecc
Q 014195 322 LPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIGK 380 (429)
Q Consensus 322 ~~~~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v~~ 380 (429)
+.... ..........+++.+++++......... ......++++|.++.+...+..
T Consensus 212 ~~~~~---~~~~~~~~s~dg~~l~~~~~~~~~~~~~-~~~~~~l~~~d~~~~~~~~~~~ 266 (297)
T 2ojh_A 212 ITDSA---YGDWFPHPSPSGDKVVFVSYDADVFDHP-RDLDVRVQLMDMDGGNVETLFD 266 (297)
T ss_dssp CCCCS---EEEEEEEECTTSSEEEEEEEETTCCSCC-SSEEEEEEEEETTSCSCEEEEE
T ss_pred EecCC---cccCCeEECCCCCEEEEEEcCCCCCccc-ccCceEEEEEecCCCCceeeec
Confidence 54322 1111111234666666665443211000 0012379999999888766543
No 51
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.55 E-value=0.023 Score=59.01 Aligned_cols=96 Identities=8% Similarity=0.027 Sum_probs=53.1
Q ss_pred cccccccccCCCeEEccCCCCCccCCcEEEE--C--CEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCcccee
Q 014195 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQI--K--NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHL 165 (429)
Q Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~R~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~ 165 (429)
..+..+|.....+..+..+......-..+.+ + +..++.|+.++ .+.+||..+++|..+..+... ...-.
T Consensus 31 g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg------~I~vwd~~~~~~~~~~~~~~h-~~~V~ 103 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG------KVLIWKEENGRWSQIAVHAVH-SASVN 103 (753)
T ss_dssp TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS------CEEEEEEETTEEEEEEEECCC-SSCEE
T ss_pred CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC------eEEEEECCCCcccccccccCC-CCCeE
Confidence 3455666655555555544433322223333 2 56777777654 378889988887665444321 11223
Q ss_pred eEEEe-C--CEEEEEeCeeCCCCCCCCceeEEEeCCCC
Q 014195 166 GMVTD-G--RYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (429)
Q Consensus 166 ~~~~~-~--~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 200 (429)
+++.. + +.++++|+. ...+..||..+.
T Consensus 104 ~v~~sp~~~~~~l~sgs~--------dg~I~vwdl~~~ 133 (753)
T 3jro_A 104 SVQWAPHEYGPLLLVASS--------DGKVSVVEFKEN 133 (753)
T ss_dssp EEEECCGGGCSEEEEEET--------TSEEEEEECCSS
T ss_pred EEEECCCCCCCEEEEEeC--------CCcEEEEEeecC
Confidence 33333 2 557777764 346777887765
No 52
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.46 E-value=0.086 Score=48.67 Aligned_cols=134 Identities=12% Similarity=0.104 Sum_probs=65.0
Q ss_pred cccccccccCCCeEEccCCCCCccCC-cEEEE-CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeE
Q 014195 90 ATFQDLPAPELKWEKMKAAPVPRLDG-AAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGM 167 (429)
Q Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~R~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~ 167 (429)
..+..+|..+.+|+.+..+....... +++.. ++.+++.|+.++ .+.+||..+.++.....+... ...-.++
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg------~i~vwd~~~~~~~~~~~~~~~-~~~v~~~ 102 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDR------NAYVWTLKGRTWKPTLVILRI-NRAARCV 102 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTS------CEEEEEEETTEEEEEEECCCC-SSCEEEE
T ss_pred CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCC------eEEEEECCCCeeeeeEEeecC-CCceeEE
Confidence 45666777776665555544322221 22222 556677776543 378889888877654322221 1122233
Q ss_pred EEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCCCc-eEeCCCCCCC-CCCceEEEE--CCEEEEEeCCCCCCCCccccce
Q 014195 168 VTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKK-WQDLPPLPVP-RYAPATQLW--RGRLHVMGGSGENRYTPEVDHW 242 (429)
Q Consensus 168 ~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~-W~~~~~~p~~-r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~ 242 (429)
+.. ++.++++|+.+ ..+..||..+.. |........+ ...-..+.+ ++++++.|+.++ .+..|
T Consensus 103 ~~~~~~~~l~~~~~d--------~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~~~ 169 (372)
T 1k8k_C 103 RWAPNEKKFAVGSGS--------RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF-----KCRIF 169 (372)
T ss_dssp EECTTSSEEEEEETT--------SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS-----CEEEE
T ss_pred EECCCCCEEEEEeCC--------CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCC-----CEEEE
Confidence 333 45566666532 345556665543 3222211111 111122222 566777777553 34555
Q ss_pred E
Q 014195 243 S 243 (429)
Q Consensus 243 ~ 243 (429)
+
T Consensus 170 d 170 (372)
T 1k8k_C 170 S 170 (372)
T ss_dssp E
T ss_pred E
Confidence 5
No 53
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.42 E-value=0.065 Score=49.82 Aligned_cols=135 Identities=12% Similarity=0.052 Sum_probs=63.5
Q ss_pred cccccccccCCCeEEccCCCCCccCCcEEEE--CCEEEEEeccCCCCceeeeEEEEECCCCc-eeeCCCCCCCCccceee
Q 014195 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNT-WGGRFDMPREMAHSHLG 166 (429)
Q Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~R~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~~~~~~r~~~~ 166 (429)
..+..+|..+..|+.+..+.........+.+ ++.+++.|+.++ .+.+||..+.+ |.....+... ...-.+
T Consensus 33 ~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~------~v~vwd~~~~~~~~~~~~~~~~-~~~v~~ 105 (377)
T 3dwl_C 33 NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDR------NAYVYEKRPDGTWKQTLVLLRL-NRAATF 105 (377)
T ss_dssp SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTS------SEEEC------CCCCEEECCCC-SSCEEE
T ss_pred CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCC------eEEEEEcCCCCceeeeeEeccc-CCceEE
Confidence 4556677777777776666543332222333 456777777543 37888988877 5544333221 112223
Q ss_pred EEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCCCc-eEeCCCCCC-CCCCceEEEE--CCEEEEEeCCCCCCCCccccc
Q 014195 167 MVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKK-WQDLPPLPV-PRYAPATQLW--RGRLHVMGGSGENRYTPEVDH 241 (429)
Q Consensus 167 ~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~-W~~~~~~p~-~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~ 241 (429)
++.. ++++++.|+.+ ..+..||..+.+ |..+..+.. ....-..+.+ ++++++.|+.+ ..+..
T Consensus 106 ~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-----~~i~i 172 (377)
T 3dwl_C 106 VRWSPNEDKFAVGSGA--------RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD-----RKAYV 172 (377)
T ss_dssp EECCTTSSCCEEEESS--------SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS-----SCEEE
T ss_pred EEECCCCCEEEEEecC--------CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC-----CEEEE
Confidence 3332 45666666643 356677877664 433332222 1111122222 56677777765 34566
Q ss_pred eEe
Q 014195 242 WSL 244 (429)
Q Consensus 242 ~~~ 244 (429)
|++
T Consensus 173 wd~ 175 (377)
T 3dwl_C 173 LSA 175 (377)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
No 54
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.38 E-value=0.086 Score=48.23 Aligned_cols=95 Identities=11% Similarity=0.004 Sum_probs=43.2
Q ss_pred CEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCCC
Q 014195 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (429)
Q Consensus 122 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 200 (429)
+.+++.|+.++. +.++|..+.+......+... ...-.++... ++.+++.|+. ...+..+|..+.
T Consensus 48 ~~~l~tgs~D~~------v~vW~~~~~~~~~~~~l~gh-~~~v~~~~~~~~~~~l~s~s~--------D~~i~lWd~~~~ 112 (321)
T 3ow8_A 48 SETVVTGSLDDL------VKVWKWRDERLDLQWSLEGH-QLGVVSVDISHTLPIAASSSL--------DAHIRLWDLENG 112 (321)
T ss_dssp -CEEEEEETTSC------EEEEEEETTEEEEEEEECCC-SSCEEEEEECSSSSEEEEEET--------TSEEEEEETTTT
T ss_pred CCEEEEEcCCCC------EEEEECCCCCeeeeeeeccC-CCCEEEEEECCCCCEEEEEeC--------CCcEEEEECCCC
Confidence 457777876643 55566555543322112110 1111222222 4456666654 346778888876
Q ss_pred ceEeCCCCCCCCCCceEEEECCEEEEEeCCC
Q 014195 201 KWQDLPPLPVPRYAPATQLWRGRLHVMGGSG 231 (429)
Q Consensus 201 ~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~ 231 (429)
+-...-.............-+++.++.|+.+
T Consensus 113 ~~~~~~~~~~~~~~~~~~spdg~~l~~g~~d 143 (321)
T 3ow8_A 113 KQIKSIDAGPVDAWTLAFSPDSQYLATGTHV 143 (321)
T ss_dssp EEEEEEECCTTCCCCEEECTTSSEEEEECTT
T ss_pred CEEEEEeCCCccEEEEEECCCCCEEEEEcCC
Confidence 5432211111111112222356677777654
No 55
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.38 E-value=0.058 Score=49.66 Aligned_cols=61 Identities=8% Similarity=0.001 Sum_probs=36.0
Q ss_pred eEEEEECCCCceeeCCCCCCCCccceeeEEE-eCCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCC
Q 014195 139 HVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPP 207 (429)
Q Consensus 139 ~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~ 207 (429)
.++.+|..+++++.+..... ...-..+++ -+++||+.+.... ...++.||+.+.+++.+..
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~--~~~p~~~a~spdg~l~~~~~~~~------~~~v~~~~~~~g~~~~~~~ 80 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAA--TQNPTYLALSAKDCLYSVDKEDD------EGGIAAWQIDGQTAHKLNT 80 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEE--CSCCCCEEECTTCEEEEEEEETT------EEEEEEEEEETTEEEEEEE
T ss_pred EEEEEcCCCCeEEEeeeeec--cCCcceEEEccCCeEEEEEecCC------CceEEEEEecCCcEEEeee
Confidence 47888888888876432221 011122333 3667777753211 3578899998888776654
No 56
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.37 E-value=0.29 Score=44.07 Aligned_cols=99 Identities=12% Similarity=0.061 Sum_probs=50.9
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 199 (429)
++..++.|+.++ .+.+||..+.+....-.... ..-.+++.. ++++++.|+. ...+..||..+
T Consensus 34 ~~~~l~s~~~dg------~i~iw~~~~~~~~~~~~~h~---~~v~~~~~~~~~~~l~s~~~--------d~~i~vwd~~~ 96 (312)
T 4ery_A 34 NGEWLASSSADK------LIKIWGAYDGKFEKTISGHK---LGISDVAWSSDSNLLVSASD--------DKTLKIWDVSS 96 (312)
T ss_dssp TSSEEEEEETTS------CEEEEETTTCCEEEEECCCS---SCEEEEEECTTSSEEEEEET--------TSEEEEEETTT
T ss_pred CCCEEEEeeCCC------eEEEEeCCCcccchhhccCC---CceEEEEEcCCCCEEEEECC--------CCEEEEEECCC
Confidence 456677777554 37788888777654322111 112233332 5566777764 34677888887
Q ss_pred CceEeCCCCCCCCCCceEEE--ECCEEEEEeCCCCCCCCccccceE
Q 014195 200 KKWQDLPPLPVPRYAPATQL--WRGRLHVMGGSGENRYTPEVDHWS 243 (429)
Q Consensus 200 ~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~ 243 (429)
.+-... +......-..+. -++++++.|+.++ .+..|+
T Consensus 97 ~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~d~-----~i~iwd 135 (312)
T 4ery_A 97 GKCLKT--LKGHSNYVFCCNFNPQSNLIVSGSFDE-----SVRIWD 135 (312)
T ss_dssp CCEEEE--EECCSSCEEEEEECSSSSEEEEEETTS-----CEEEEE
T ss_pred CcEEEE--EcCCCCCEEEEEEcCCCCEEEEEeCCC-----cEEEEE
Confidence 653221 111111111122 2456777777653 456666
No 57
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=96.37 E-value=0.58 Score=45.01 Aligned_cols=133 Identities=19% Similarity=0.273 Sum_probs=69.8
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCCceeEEEeCCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 200 (429)
++++|+|-| +..|+||..+++...- ..+. .+... ++....+++|+|-| +..++||+.+.
T Consensus 158 ~~~~yfFkG--------~~yw~yd~~~~~~~~~-~w~g-i~~iD-AA~~~~g~~YfFkG----------~~y~rfd~~~~ 216 (460)
T 1qhu_A 158 DEGILFFQG--------NRKWFWDLTTGTKKER-SWPA-VGNCT-SALRWLGRYYCFQG----------NQFLRFNPVSG 216 (460)
T ss_dssp SSEEEEEET--------TEEEEEETTTTEEEEE-CCTT-SCCCS-EEEEETTEEEEEET----------TEEEEECTTTC
T ss_pred CCeEEEEec--------ccEEEEecccceeecc-cCCC-CCccc-hheeeCCceEEEEC----------CEEEEEcCccC
Confidence 678898877 2479999887754321 1111 11222 33334689999966 35677777654
Q ss_pred c------------eEeCCCCC------------------CCC-CCceEEE-ECCEEEEEeCCCCCCCCccccceEeeeec
Q 014195 201 K------------WQDLPPLP------------------VPR-YAPATQL-WRGRLHVMGGSGENRYTPEVDHWSLAVKD 248 (429)
Q Consensus 201 ~------------W~~~~~~p------------------~~r-~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~~ 248 (429)
+ |..++... .+. ..-++.. .++++|+|-|..--++....+....
T Consensus 217 ~v~~gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg~~yWR~~~~~~~~~p---- 292 (460)
T 1qhu_A 217 EVPPGYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSGSHYWRLDTNRDGWHS---- 292 (460)
T ss_dssp CCCTTCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEETTEEEECTTGGGCCCC----
T ss_pred cccCCCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeCCEEEEEecCCCCcCc----
Confidence 3 22222110 111 2233334 4789999988532222221111111
Q ss_pred CCccccceeeccCCCCCCCceeEEEeCCEEEEEccc
Q 014195 249 GKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQ 284 (429)
Q Consensus 249 ~d~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~ 284 (429)
.+....|..+ |..-- ++...++++|+|-|.
T Consensus 293 -~~Is~~Wpgl---P~~ID--AAf~~~~~~yfFkG~ 322 (460)
T 1qhu_A 293 -WPIAHQWPQG---PSTVD--AAFSWEDKLYLIQDT 322 (460)
T ss_dssp -EEGGGTCTTS---CSSCS--EEEEETTEEEEEETT
T ss_pred -cchhhhccCC---CCCCc--EEEEECCeEEEEeCC
Confidence 0334566644 33322 555568999999775
No 58
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.33 E-value=0.27 Score=47.12 Aligned_cols=132 Identities=11% Similarity=0.091 Sum_probs=66.2
Q ss_pred ECCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCC
Q 014195 120 IKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (429)
Q Consensus 120 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~ 198 (429)
.++.+++.|+.++ .+.+||..+.+-...-.... ..-.+++.. ++..++.|+. ...+..||..
T Consensus 278 ~~~~~l~~~~~d~------~i~vwd~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~sg~~--------dg~i~vwd~~ 340 (464)
T 3v7d_B 278 GHGNIVVSGSYDN------TLIVWDVAQMKCLYILSGHT---DRIYSTIYDHERKRCISASM--------DTTIRIWDLE 340 (464)
T ss_dssp EETTEEEEEETTS------CEEEEETTTTEEEEEECCCS---SCEEEEEEETTTTEEEEEET--------TSCEEEEETT
T ss_pred CCCCEEEEEeCCC------eEEEEECCCCcEEEEecCCC---CCEEEEEEcCCCCEEEEEeC--------CCcEEEEECC
Confidence 3455666676543 38889988765433211111 112233333 4456666654 3467889988
Q ss_pred CCceEeCCCCCCCCCCceEEEECCEEEEEeCCCCCCCCccccceEeeeecCCccccceeeccCCCCCCCceeEEEeCCEE
Q 014195 199 TKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRL 278 (429)
Q Consensus 199 t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~i 278 (429)
+.+-.. .+......-..+...++.++.|+.++ .+..|++. .....+... ........+...++++
T Consensus 341 ~~~~~~--~~~~h~~~v~~~~~~~~~l~s~s~dg-----~v~vwd~~-----~~~~~~~~~---~~~~~~~~~~~~~~~~ 405 (464)
T 3v7d_B 341 NGELMY--TLQGHTALVGLLRLSDKFLVSAAADG-----SIRGWDAN-----DYSRKFSYH---HTNLSAITTFYVSDNI 405 (464)
T ss_dssp TTEEEE--EECCCSSCEEEEEECSSEEEEEETTS-----EEEEEETT-----TCCEEEEEE---CTTCCCEEEEEECSSE
T ss_pred CCcEEE--EEeCCCCcEEEEEEcCCEEEEEeCCC-----cEEEEECC-----CCceeeeec---CCCCccEEEEEeCCCE
Confidence 765322 12222222344455677777777653 46677642 111112211 1112222445567777
Q ss_pred EEEcc
Q 014195 279 LVIGG 283 (429)
Q Consensus 279 yv~GG 283 (429)
++.|+
T Consensus 406 l~~~~ 410 (464)
T 3v7d_B 406 LVSGS 410 (464)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 77776
No 59
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.28 E-value=0.048 Score=49.51 Aligned_cols=214 Identities=11% Similarity=0.008 Sum_probs=99.8
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 199 (429)
++..+++|+.++ .+.+||..+.+......+... ...-.+++.. ++..++.|+. ...+..||..+
T Consensus 108 ~~~~l~~~~~d~------~i~~~d~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~--------dg~v~~~d~~~ 172 (337)
T 1gxr_A 108 DGCTLIVGGEAS------TLSIWDLAAPTPRIKAELTSS-APACYALAISPDSKVCFSCCS--------DGNIAVWDLHN 172 (337)
T ss_dssp TSSEEEEEESSS------EEEEEECCCC--EEEEEEECS-SSCEEEEEECTTSSEEEEEET--------TSCEEEEETTT
T ss_pred CCCEEEEEcCCC------cEEEEECCCCCcceeeecccC-CCceEEEEECCCCCEEEEEeC--------CCcEEEEeCCC
Confidence 455666666543 488999988875443332221 1112233333 5556666653 24678899887
Q ss_pred CceEeCCCCCCCCCCceEEEE--CCEEEEEeCCCCCCCCccccceEeeeecCCccccceeeccCCCCCCCceeEEE-eCC
Q 014195 200 KKWQDLPPLPVPRYAPATQLW--RGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVV-VDD 276 (429)
Q Consensus 200 ~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~-~~~ 276 (429)
.+....-... ......+.+ +++.++.|+.++ .+..|++ .+.+-......+... .+++. .++
T Consensus 173 ~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~dg-----~i~~~d~-------~~~~~~~~~~~~~~v--~~~~~s~~~ 236 (337)
T 1gxr_A 173 QTLVRQFQGH--TDGASCIDISNDGTKLWTGGLDN-----TVRSWDL-------REGRQLQQHDFTSQI--FSLGYCPTG 236 (337)
T ss_dssp TEEEEEECCC--SSCEEEEEECTTSSEEEEEETTS-----EEEEEET-------TTTEEEEEEECSSCE--EEEEECTTS
T ss_pred Cceeeeeecc--cCceEEEEECCCCCEEEEEecCC-----cEEEEEC-------CCCceEeeecCCCce--EEEEECCCC
Confidence 7544321111 111222222 566677776542 3555553 222111111111111 12222 356
Q ss_pred EEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCCCCCCCCCcceeEEEECCEEEEEcccCCCCCC
Q 014195 277 RLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPT 355 (429)
Q Consensus 277 ~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~ 355 (429)
+++++|+.++. +..|| .+..-..+.... ..........++++++.++.++
T Consensus 237 ~~l~~~~~~~~----------------------i~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~dg---- 287 (337)
T 1gxr_A 237 EWLAVGMESSN----------------------VEVLHVNKPDKYQLHLHE---SCVLSLKFAYCGKWFVSTGKDN---- 287 (337)
T ss_dssp SEEEEEETTSC----------------------EEEEETTSSCEEEECCCS---SCEEEEEECTTSSEEEEEETTS----
T ss_pred CEEEEEcCCCc----------------------EEEEECCCCCeEEEcCCc---cceeEEEECCCCCEEEEecCCC----
Confidence 67777765432 56666 443322222211 1111112233567777777532
Q ss_pred ccceeeeCcEEEEecCCCCeEEecccCcceeeeee-EEECCEEEEEcccC
Q 014195 356 TKKMVLVGEIFQFNLNTLKWHVIGKLPYRVKTTLA-GYWNGWLYFTSGQR 404 (429)
Q Consensus 356 ~~~~~~~~~i~~yd~~~~~W~~v~~lp~~r~~~~~-~~~~~~i~v~GG~~ 404 (429)
.+.+||..+.+-..... ....-.++ ...+++.++.|+.+
T Consensus 288 --------~i~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~d 327 (337)
T 1gxr_A 288 --------LLNAWRTPYGASIFQSK--ESSSVLSCDISVDDKYIVTGSGD 327 (337)
T ss_dssp --------EEEEEETTTCCEEEEEE--CSSCEEEEEECTTSCEEEEEETT
T ss_pred --------cEEEEECCCCeEEEEec--CCCcEEEEEECCCCCEEEEecCC
Confidence 68889988776442211 11111222 22356777776643
No 60
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.26 E-value=0.086 Score=48.40 Aligned_cols=106 Identities=8% Similarity=-0.012 Sum_probs=52.5
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 199 (429)
++.+++.|+.++ .+.+||..+.+-... +... ...-.+++.. ++..++.|+. ...+..||..+
T Consensus 43 ~~~~l~~~~~dg------~i~vwd~~~~~~~~~--~~~h-~~~v~~~~~~~~~~~l~s~~~--------dg~i~iwd~~~ 105 (369)
T 3zwl_B 43 EGDLLFSCSKDS------SASVWYSLNGERLGT--LDGH-TGTIWSIDVDCFTKYCVTGSA--------DYSIKLWDVSN 105 (369)
T ss_dssp TSCEEEEEESSS------CEEEEETTTCCEEEE--ECCC-SSCEEEEEECTTSSEEEEEET--------TTEEEEEETTT
T ss_pred CCCEEEEEeCCC------EEEEEeCCCchhhhh--hhhc-CCcEEEEEEcCCCCEEEEEeC--------CCeEEEEECCC
Confidence 456677776543 378899877654332 2110 1112233333 4556666654 34688889887
Q ss_pred CceEeCCCCCCCCCCceEEE-ECCEEEEEeCCCCCCCCccccceEee
Q 014195 200 KKWQDLPPLPVPRYAPATQL-WRGRLHVMGGSGENRYTPEVDHWSLA 245 (429)
Q Consensus 200 ~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~ 245 (429)
.+-...-..+ ..-..+.. -+++.++.++.+.......+..|++.
T Consensus 106 ~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~ 150 (369)
T 3zwl_B 106 GQCVATWKSP--VPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIE 150 (369)
T ss_dssp CCEEEEEECS--SCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEE
T ss_pred CcEEEEeecC--CCeEEEEEccCCCEEEEecCCccCCCCEEEEEEec
Confidence 7644332211 11111222 24556666554422223445666653
No 61
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.25 E-value=0.027 Score=58.47 Aligned_cols=104 Identities=11% Similarity=0.118 Sum_probs=59.4
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-C--CEEEEEeCeeCCCCCCCCceeEEEeC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-G--RYIYVVTGQYGPQCRGPTAHTFVLDT 197 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~--~~lyv~GG~~~~~~~~~~~~~~~yd~ 197 (429)
++..++.|+.++ .+.+||...+++..+..+... ...-.+++.. + +.+++.|+.+ ..+..||.
T Consensus 20 dg~~latg~~dg------~I~vwd~~~~~~~~~~~l~~h-~~~V~~l~~s~~~~~~~l~s~s~D--------g~I~vwd~ 84 (753)
T 3jro_A 20 YGKRLATCSSDK------TIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHPKFGTILASCSYD--------GKVLIWKE 84 (753)
T ss_dssp SSCCEEEEETTT------EEEEEEEETTEEEEEEEECCC-SSCEEEEEECCTTSCSEEEEEETT--------SCEEEEEE
T ss_pred CCCeEEEEECCC------cEEEEecCCCCCccceeccCC-cCceEEEEecCCCCCCEEEEEeCC--------CeEEEEEC
Confidence 355667776543 477888877777665544431 1122333332 3 5667777643 46778899
Q ss_pred CCCceEeCCCCCCCCCCceEEEE--C--CEEEEEeCCCCCCCCccccceEe
Q 014195 198 ETKKWQDLPPLPVPRYAPATQLW--R--GRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 198 ~t~~W~~~~~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
.+.+|..+..+......-..+.+ + +.+++.|+.++ .+..|++
T Consensus 85 ~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg-----~I~vwdl 130 (753)
T 3jro_A 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEF 130 (753)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEEC
T ss_pred CCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCC-----cEEEEEe
Confidence 88887766544332322333333 3 66778877653 3556654
No 62
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.21 E-value=0.14 Score=48.36 Aligned_cols=92 Identities=3% Similarity=-0.077 Sum_probs=46.0
Q ss_pred cccccccccCCCeEEccCCCCCccCCcEEEECCEEEEEeccCCCCceeeeEEEEECCCCcee--eCCCCCCCCccceeeE
Q 014195 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWG--GRFDMPREMAHSHLGM 167 (429)
Q Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~--~~~~~~~~~~r~~~~~ 167 (429)
..+..+|..+.+-.. .+............++.+++.|+.++ .+.+||..+..-. .+.... ..-.++
T Consensus 156 g~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~~----~~v~~~ 223 (401)
T 4aez_A 156 GLVDIYDVESQTKLR--TMAGHQARVGCLSWNRHVLSSGSRSG------AIHHHDVRIANHQIGTLQGHS----SEVCGL 223 (401)
T ss_dssp SCEEEEETTTCCEEE--EECCCSSCEEEEEEETTEEEEEETTS------EEEEEETTSSSCEEEEEECCS----SCEEEE
T ss_pred CeEEEEECcCCeEEE--EecCCCCceEEEEECCCEEEEEcCCC------CEEEEecccCcceeeEEcCCC----CCeeEE
Confidence 345566666554322 22222222233344666777777543 4788998743321 111111 112223
Q ss_pred EEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCCCc
Q 014195 168 VTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKK 201 (429)
Q Consensus 168 ~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~ 201 (429)
+.. ++.+++.|+. ...+..||..+.+
T Consensus 224 ~~~~~~~~l~s~~~--------d~~v~iwd~~~~~ 250 (401)
T 4aez_A 224 AWRSDGLQLASGGN--------DNVVQIWDARSSI 250 (401)
T ss_dssp EECTTSSEEEEEET--------TSCEEEEETTCSS
T ss_pred EEcCCCCEEEEEeC--------CCeEEEccCCCCC
Confidence 332 5567777764 3467788988754
No 63
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.20 E-value=0.38 Score=45.00 Aligned_cols=106 Identities=12% Similarity=0.171 Sum_probs=53.2
Q ss_pred CEEEEEeccCCCCceeeeEEEEECCCCc------ee-eCCCCCCCCccceeeEEEe--CCEEEEEeCeeCCCCCCCCcee
Q 014195 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNT------WG-GRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHT 192 (429)
Q Consensus 122 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~------W~-~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~ 192 (429)
+.+++.|+.++ .+.+||..+.+ -. .+...... ...-.+++.. ++.+++.|+.+ ..+
T Consensus 126 ~~~l~s~~~dg------~v~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~d--------g~v 190 (416)
T 2pm9_A 126 DNVLASGGNNG------EIFIWDMNKCTESPSNYTPLTPGQSMSS-VDEVISLAWNQSLAHVFASAGSS--------NFA 190 (416)
T ss_dssp TTBEEEECSSS------CEEBCBTTTTSSCTTTCCCBCCCCSCCS-SCCCCEEEECSSCTTEEEEESSS--------SCE
T ss_pred CCEEEEEcCCC------eEEEEECCCCccccccccccccccccCC-CCCeeEEEeCCCCCcEEEEEcCC--------CCE
Confidence 56777777543 37889988765 11 11111111 1112233333 25677777643 457
Q ss_pred EEEeCCCCceEeCCCCCCC----CCCceEEEE--C-CEEEEEeCCCCCCCCccccceEe
Q 014195 193 FVLDTETKKWQDLPPLPVP----RYAPATQLW--R-GRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 193 ~~yd~~t~~W~~~~~~p~~----r~~~~~~~~--~-~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
..||..+.+-...-..+.. ......+.+ + ..+++.|+.++. ...+..|++
T Consensus 191 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--~~~i~~~d~ 247 (416)
T 2pm9_A 191 SIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN--DPSILIWDL 247 (416)
T ss_dssp EEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS--SCCCCEEET
T ss_pred EEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC--CceEEEEeC
Confidence 8899888765433222211 111222222 2 357777765531 125677764
No 64
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.20 E-value=0.046 Score=50.43 Aligned_cols=99 Identities=9% Similarity=0.097 Sum_probs=49.6
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 199 (429)
++. ++.|+.++ .+.+||..+.+-...-.... ..-.+++.. ++.+++.|+.+ ..+..||..+
T Consensus 154 ~~~-l~s~s~d~------~i~~wd~~~~~~~~~~~~h~---~~v~~~~~~~~~~~l~sg~~d--------~~v~~wd~~~ 215 (340)
T 1got_B 154 DNQ-IVTSSGDT------TCALWDIETGQQTTTFTGHT---GDVMSLSLAPDTRLFVSGACD--------ASAKLWDVRE 215 (340)
T ss_dssp TTE-EEEEETTS------CEEEEETTTTEEEEEECCCS---SCEEEEEECTTSSEEEEEETT--------SCEEEEETTT
T ss_pred CCc-EEEEECCC------cEEEEECCCCcEEEEEcCCC---CceEEEEECCCCCEEEEEeCC--------CcEEEEECCC
Confidence 455 45555432 47889988876433211111 112233333 55677777643 3577788877
Q ss_pred CceEeCCCCCCCCCCceEEEE--CCEEEEEeCCCCCCCCccccceEe
Q 014195 200 KKWQDLPPLPVPRYAPATQLW--RGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 200 ~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
.+-... +......-..+.+ ++++++.|+.++ .+..|++
T Consensus 216 ~~~~~~--~~~h~~~v~~v~~~p~~~~l~s~s~d~-----~v~iwd~ 255 (340)
T 1got_B 216 GMCRQT--FTGHESDINAICFFPNGNAFATGSDDA-----TCRLFDL 255 (340)
T ss_dssp CSEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEET
T ss_pred CeeEEE--EcCCcCCEEEEEEcCCCCEEEEEcCCC-----cEEEEEC
Confidence 643221 1111111112222 567778877653 4666763
No 65
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.13 E-value=0.22 Score=44.12 Aligned_cols=156 Identities=13% Similarity=0.047 Sum_probs=90.7
Q ss_pred ceeeEEEeCCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEEECCEEEEEeCCCCCCCCccccce
Q 014195 163 SHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHW 242 (429)
Q Consensus 163 ~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~ 242 (429)
...++...++.||+..|.++ .+.++|+++.+=..-- ++..-...+++..+++||+....++ ...+|
T Consensus 56 ftqGL~~~~~~Ly~stG~~g--------~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~-----~v~V~ 121 (268)
T 3nok_A 56 FTQGLVFHQGHFFESTGHQG--------TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEG-----LLFTW 121 (268)
T ss_dssp CEEEEEEETTEEEEEETTTT--------EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSC-----EEEEE
T ss_pred ccceEEEECCEEEEEcCCCC--------EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCC-----EEEEE
Confidence 34567777999999988532 4888999998754433 5544445567788999999965432 23333
Q ss_pred EeeeecCCccccceeeccCCCCCCCceeEEEeCCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeE-
Q 014195 243 SLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWK- 320 (429)
Q Consensus 243 ~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~- 320 (429)
+ +.+.+-...-+.+ ..+.+++.-+++||+.-|.+ .++.+| .+.+-.
T Consensus 122 D-------~~Tl~~~~ti~~~--~eGwGLt~Dg~~L~vSdGs~-----------------------~l~~iDp~T~~v~~ 169 (268)
T 3nok_A 122 S-------GMPPQRERTTRYS--GEGWGLCYWNGKLVRSDGGT-----------------------MLTFHEPDGFALVG 169 (268)
T ss_dssp E-------TTTTEEEEEEECS--SCCCCEEEETTEEEEECSSS-----------------------EEEEECTTTCCEEE
T ss_pred E-------CCcCcEEEEEeCC--CceeEEecCCCEEEEECCCC-----------------------EEEEEcCCCCeEEE
Confidence 2 4333322211222 22346667788899987632 478887 554332
Q ss_pred EcC--CCCCCCCCcceeEEEECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEE
Q 014195 321 VLP--SMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHV 377 (429)
Q Consensus 321 ~~~--~~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~ 377 (429)
.+. .-+.+..... .+...+++||+-- +. .++|.+.||++.+-..
T Consensus 170 ~I~V~~~g~~v~~lN-eLe~~dG~lyanv-w~-----------s~~I~vIDp~TG~V~~ 215 (268)
T 3nok_A 170 AVQVKLRGQPVELIN-ELECANGVIYANI-WH-----------SSDVLEIDPATGTVVG 215 (268)
T ss_dssp EEECEETTEECCCEE-EEEEETTEEEEEE-TT-----------CSEEEEECTTTCBEEE
T ss_pred EEEeCCCCccccccc-ccEEeCCEEEEEE-CC-----------CCeEEEEeCCCCcEEE
Confidence 222 1111111111 1234588988532 22 3589999999986544
No 66
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.12 E-value=0.29 Score=44.86 Aligned_cols=102 Identities=7% Similarity=-0.000 Sum_probs=48.6
Q ss_pred cccccccccCCCeEEccCCCCCc-cCCcEEEE-CC-EEEEEeccCCCCceeeeEEEEECC-CCceeeCCCCC----CCCc
Q 014195 90 ATFQDLPAPELKWEKMKAAPVPR-LDGAAIQI-KN-LLYVFAGYGSIDYVHSHVDIYNFT-DNTWGGRFDMP----REMA 161 (429)
Q Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~R-~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~yd~~-~~~W~~~~~~~----~~~~ 161 (429)
..+..+|....+++.+..+.... .-..++.. ++ .||+.+..+ ..+.+||.. +.+...+..+. .|..
T Consensus 63 ~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~------~~v~v~~~~~~g~~~~~~~~~~~~~~p~~ 136 (347)
T 3hfq_A 63 GGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHK------GTAEVMKIAADGALTLTDTVQHSGHGPRP 136 (347)
T ss_dssp EEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTT------TEEEEEEECTTSCEEEEEEEECCCCCSST
T ss_pred ceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCC------CEEEEEEeCCCCCeeecceeecCCCCCCc
Confidence 45667777666666655432111 11223333 34 566665322 236677764 33333322111 1101
Q ss_pred ----cceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCC-CCceEeC
Q 014195 162 ----HSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTE-TKKWQDL 205 (429)
Q Consensus 162 ----r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~-t~~W~~~ 205 (429)
..-+++++. ++++|+.+.. ...+.+||+. +.+...+
T Consensus 137 ~~~~~~~~~~~~spdg~l~v~~~~--------~~~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 137 EQDGSHIHYTDLTPDNRLAVIDLG--------SDKVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp TCSSCCEEEEEECTTSCEEEEETT--------TTEEEEEEECTTSCEEEE
T ss_pred cccCCCceEEEECCCCcEEEEeCC--------CCEEEEEEECCCCcEEEe
Confidence 112333333 5567776431 3478888887 5555543
No 67
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.09 E-value=0.17 Score=48.00 Aligned_cols=90 Identities=11% Similarity=-0.086 Sum_probs=51.3
Q ss_pred eEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCC---CCCCC
Q 014195 139 HVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLP---VPRYA 214 (429)
Q Consensus 139 ~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p---~~r~~ 214 (429)
.++.+|+.+++++.+..++.+.. -.+++.. ++.+++.++. ...+.+||+.+.+.....+.. .....
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~~--~~~~~~s~~~~~~~~~~~--------~~~i~~~d~~~g~~~~~~~~~~~~~~~~~ 171 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGFQ--PKSVRFIDNTRLAIPLLE--------DEGMDVLDINSGQTVRLSPPEKYKKKLGF 171 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSSC--BCCCEESSSSEEEEEBTT--------SSSEEEEETTTCCEEEECCCHHHHTTCCE
T ss_pred EEEEECCCCCcceEEEEEcCCCC--ceEEEEeCCCeEEEEeCC--------CCeEEEEECCCCeEeeecCcccccccCCc
Confidence 48889998877666544433211 1223332 7788887653 235889999988776543321 11111
Q ss_pred ceEEEE--CCEEEEEeCCCCCCCCccccceE
Q 014195 215 PATQLW--RGRLHVMGGSGENRYTPEVDHWS 243 (429)
Q Consensus 215 ~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~ 243 (429)
...+.. ++++++.++.+ ..+..|+
T Consensus 172 v~~~~~~~~~~~~~s~~~d-----~~v~~~d 197 (433)
T 3bws_A 172 VETISIPEHNELWVSQMQA-----NAVHVFD 197 (433)
T ss_dssp EEEEEEGGGTEEEEEEGGG-----TEEEEEE
T ss_pred eeEEEEcCCCEEEEEECCC-----CEEEEEE
Confidence 122233 68888888754 3455665
No 68
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.08 E-value=0.14 Score=48.00 Aligned_cols=65 Identities=9% Similarity=0.106 Sum_probs=33.2
Q ss_pred ECCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCC
Q 014195 120 IKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (429)
Q Consensus 120 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~ 198 (429)
..+..+++|+.+ ..+.+||..+.+-...-.... ..-.+++.. ++.+++.|+. ...+..||..
T Consensus 215 ~~~~~~~~~~~~------g~i~~~d~~~~~~~~~~~~~~---~~i~~~~~~~~~~~l~~~~~--------d~~i~i~d~~ 277 (425)
T 1r5m_A 215 VDDDKFVIPGPK------GAIFVYQITEKTPTGKLIGHH---GPISVLEFNDTNKLLLSASD--------DGTLRIWHGG 277 (425)
T ss_dssp EETTEEEEECGG------GCEEEEETTCSSCSEEECCCS---SCEEEEEEETTTTEEEEEET--------TSCEEEECSS
T ss_pred cCCCEEEEEcCC------CeEEEEEcCCCceeeeeccCC---CceEEEEECCCCCEEEEEcC--------CCEEEEEECC
Confidence 334446666653 248899988764322111111 112233333 4556666653 2357788877
Q ss_pred CCc
Q 014195 199 TKK 201 (429)
Q Consensus 199 t~~ 201 (429)
+.+
T Consensus 278 ~~~ 280 (425)
T 1r5m_A 278 NGN 280 (425)
T ss_dssp SBS
T ss_pred CCc
Confidence 654
No 69
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.01 E-value=0.4 Score=41.91 Aligned_cols=172 Identities=14% Similarity=0.071 Sum_probs=79.6
Q ss_pred cceeee-ecCCCcccceeeeeeecCCCCe-EEecCCCCCCCcceeeeecCCCCcCcccccccccccccCCCeEEccCCCC
Q 014195 33 ADFFWA-SSSKFTSSYLNIASNWSPYHNS-IILPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAPELKWEKMKAAPV 110 (429)
Q Consensus 33 ~~~ly~-~GG~~~~~~~~~~~~yd~~~~~-~~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 110 (429)
++.||+ ....+ +.+.+||+.+.. ...+......-.+++............ ...+..+|+.......+.....
T Consensus 34 ~g~l~v~~~~~~-----~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~ 107 (270)
T 1rwi_B 34 AGNVYVTSEGMY-----GRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGL 107 (270)
T ss_dssp TCCEEEEECSSS-----CEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSC
T ss_pred CCCEEEEccCCC-----CcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCc
Confidence 567888 53332 256778887766 433321111122333322211111111 3467778877655443321110
Q ss_pred CccCCcEEEE-CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCC
Q 014195 111 PRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGP 188 (429)
Q Consensus 111 ~R~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~ 188 (429)
..-.+++.. ++.||+.... ...+.+||..+........... ..-.++++. +++||+....
T Consensus 108 -~~p~~i~~~~~g~l~v~~~~------~~~i~~~~~~~~~~~~~~~~~~---~~p~~i~~~~~g~l~v~~~~-------- 169 (270)
T 1rwi_B 108 -NYPEGLAVDTQGAVYVADRG------NNRVVKLAAGSKTQTVLPFTGL---NDPDGVAVDNSGNVYVTDTD-------- 169 (270)
T ss_dssp -SSEEEEEECTTCCEEEEEGG------GTEEEEECTTCCSCEECCCCSC---CSCCCEEECTTCCEEEEEGG--------
T ss_pred -CCCcceEECCCCCEEEEECC------CCEEEEEECCCceeEeeccccC---CCceeEEEeCCCCEEEEECC--------
Confidence 111233333 5678887543 1247888876665443321111 112334444 5678887432
Q ss_pred CceeEEEeCCCCceEeCCCCCCCCCCceEEEE-CCEEEEEeC
Q 014195 189 TAHTFVLDTETKKWQDLPPLPVPRYAPATQLW-RGRLHVMGG 229 (429)
Q Consensus 189 ~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG 229 (429)
...+.+||+.+..-........ ..-..++.- ++.||+...
T Consensus 170 ~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~d~~g~l~v~~~ 210 (270)
T 1rwi_B 170 NNRVVKLEAESNNQVVLPFTDI-TAPWGIAVDEAGTVYVTEH 210 (270)
T ss_dssp GTEEEEECTTTCCEEECCCSSC-CSEEEEEECTTCCEEEEET
T ss_pred CCEEEEEecCCCceEeecccCC-CCceEEEECCCCCEEEEEC
Confidence 3478899988776544321111 111223332 458888764
No 70
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.99 E-value=0.21 Score=44.35 Aligned_cols=112 Identities=13% Similarity=0.027 Sum_probs=69.1
Q ss_pred eEEccCCCCCccC--CcEEEEC-CEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEeCCEEEEEe
Q 014195 102 WEKMKAAPVPRLD--GAAIQIK-NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVT 178 (429)
Q Consensus 102 W~~~~~~p~~R~~--~~~~~~~-~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~G 178 (429)
.+.+...|..... ++++..+ +.||+..|..+. +.+.++|+.+++=...-+++. .....+++..+++||+..
T Consensus 9 ~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~----s~v~~iD~~tg~v~~~i~l~~--~~fgeGi~~~g~~lyv~t 82 (266)
T 2iwa_A 9 VEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGR----SSVRQVALQTGKVENIHKMDD--SYFGEGLTLLNEKLYQVV 82 (266)
T ss_dssp EEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTT----CEEEEEETTTCCEEEEEECCT--TCCEEEEEEETTEEEEEE
T ss_pred ceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCC----CEEEEEECCCCCEEEEEecCC--CcceEEEEEeCCEEEEEE
Confidence 3444555544322 4565555 799998875332 358999999998654333332 334567788899999985
Q ss_pred CeeCCCCCCCCceeEEEeCCCCceEeCCCCCCC-CCCceEEEECCEEEEEeC
Q 014195 179 GQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVP-RYAPATQLWRGRLHVMGG 229 (429)
Q Consensus 179 G~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~-r~~~~~~~~~~~lyv~GG 229 (429)
-. .+.+++||+.+.+=.. .++.+ -...+++.-++++|+.-|
T Consensus 83 ~~--------~~~v~viD~~t~~v~~--~i~~g~~~g~glt~Dg~~l~vs~g 124 (266)
T 2iwa_A 83 WL--------KNIGFIYDRRTLSNIK--NFTHQMKDGWGLATDGKILYGSDG 124 (266)
T ss_dssp TT--------CSEEEEEETTTTEEEE--EEECCSSSCCEEEECSSSEEEECS
T ss_pred ec--------CCEEEEEECCCCcEEE--EEECCCCCeEEEEECCCEEEEECC
Confidence 32 5689999998764322 22222 233445555677888754
No 71
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.96 E-value=0.38 Score=49.96 Aligned_cols=198 Identities=16% Similarity=0.084 Sum_probs=102.4
Q ss_pred eEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCC---CCCCC
Q 014195 139 HVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLP---VPRYA 214 (429)
Q Consensus 139 ~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p---~~r~~ 214 (429)
-+.+||+.+++++.......+ ...-.+++.. ++.||+.. ...+++||+.+.+|+.....+ .+...
T Consensus 428 Gl~~~~~~~~~~~~~~~~~~~-~~~v~~i~~d~~g~lwigt----------~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (781)
T 3v9f_A 428 NISYYNTRLKKFQIIELEKNE-LLDVRVFYEDKNKKIWIGT----------HAGVFVIDLASKKVIHHYDTSNSQLLENF 496 (781)
T ss_dssp EEEEECSSSCEEEECCSTTTC-CCCEEEEEECTTSEEEEEE----------TTEEEEEESSSSSCCEEECTTTSSCSCSC
T ss_pred CEEEEcCCCCcEEEeccCCCC-CCeEEEEEECCCCCEEEEE----------CCceEEEeCCCCeEEecccCcccccccce
Confidence 378999999999877532111 1222334333 57888742 246889999999887664322 11111
Q ss_pred -ceEEE-ECCEEEEEeCCCCCCCCccccceEeeeecCCccccceeecc---CCCCCCCceeEEE-eCCEEEEEcccCCCC
Q 014195 215 -PATQL-WRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEI---PIPRGGPHRACVV-VDDRLLVIGGQEGDF 288 (429)
Q Consensus 215 -~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~~~~~~~~~-~~~~iyv~GG~~~~~ 288 (429)
.+++. .++.|++-.-..+ . +. +|+.+++++... .++.... .+++. .++.|++... .
T Consensus 497 i~~i~~d~~g~lWigt~~~G------l--~~-----~~~~~~~~~~~~~~~~l~~~~i-~~i~~d~~g~lWi~T~-~--- 558 (781)
T 3v9f_A 497 VRSIAQDSEGRFWIGTFGGG------V--GI-----YTPDMQLVRKFNQYEGFCSNTI-NQIYRSSKGQMWLATG-E--- 558 (781)
T ss_dssp EEEEEECTTCCEEEEESSSC------E--EE-----ECTTCCEEEEECTTTTCSCSCE-EEEEECTTSCEEEEET-T---
T ss_pred eEEEEEcCCCCEEEEEcCCC------E--EE-----EeCCCCeEEEccCCCCCCCCee-EEEEECCCCCEEEEEC-C---
Confidence 11221 2567776532111 1 11 235555555532 2232221 12222 2566777543 1
Q ss_pred CCCCCCCccccccCCeeeeCce-EEeC-CCCCeEEcCC---CCCCCCCcceeEEE-ECCEEEEEcccCCCCCCccceeee
Q 014195 289 MAKPGSPIFKCSRRNEVVYDDV-YMLD-DEMKWKVLPS---MPKPDSHIEFAWVL-VNNSIVIVGGTTEKHPTTKKMVLV 362 (429)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~v-~~~d-~~~~W~~~~~---~~~~r~~~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~ 362 (429)
-+ ++|| .+.+++.... ++.... .+++. .++.|++.+.
T Consensus 559 --------------------Glv~~~d~~~~~~~~~~~~~gl~~~~i---~~i~~d~~g~lW~~t~-------------- 601 (781)
T 3v9f_A 559 --------------------GLVCFPSARNFDYQVFQRKEGLPNTHI---RAISEDKNGNIWASTN-------------- 601 (781)
T ss_dssp --------------------EEEEESCTTTCCCEEECGGGTCSCCCC---CEEEECSSSCEEEECS--------------
T ss_pred --------------------CceEEECCCCCcEEEccccCCCCCceE---EEEEECCCCCEEEEcC--------------
Confidence 14 8888 6777776542 332221 12233 3577887652
Q ss_pred CcEEEEecCCCCeEEec---ccCcceee-eeeEEE-CCEEEEEccc
Q 014195 363 GEIFQFNLNTLKWHVIG---KLPYRVKT-TLAGYW-NGWLYFTSGQ 403 (429)
Q Consensus 363 ~~i~~yd~~~~~W~~v~---~lp~~r~~-~~~~~~-~~~i~v~GG~ 403 (429)
+-+.+|||++.+++... .++..... .+++.. +|+||+ ||.
T Consensus 602 ~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~-g~~ 646 (781)
T 3v9f_A 602 TGISCYITSKKCFYTYDHSNNIPQGSFISGCVTKDHNGLIYF-GSI 646 (781)
T ss_dssp SCEEEEETTTTEEEEECGGGTCCSSCEEEEEEEECTTSCEEE-EET
T ss_pred CceEEEECCCCceEEecccCCccccccccCceEECCCCEEEE-ECC
Confidence 14889999999888763 24433322 233333 456555 553
No 72
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=95.95 E-value=0.52 Score=44.25 Aligned_cols=64 Identities=3% Similarity=-0.068 Sum_probs=36.7
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 199 (429)
++.+++.|+.++ .+.+||..+.+-...-... ...-.+++.. ++.+++.|+. ...+..||..+
T Consensus 108 ~~~~l~~~~~dg------~i~iwd~~~~~~~~~~~~h---~~~v~~~~~~~~~~~l~s~s~--------d~~i~iwd~~~ 170 (420)
T 3vl1_A 108 QMRRFILGTTEG------DIKVLDSNFNLQREIDQAH---VSEITKLKFFPSGEALISSSQ--------DMQLKIWSVKD 170 (420)
T ss_dssp SSCEEEEEETTS------CEEEECTTSCEEEEETTSS---SSCEEEEEECTTSSEEEEEET--------TSEEEEEETTT
T ss_pred CCCEEEEEECCC------CEEEEeCCCcceeeecccc---cCccEEEEECCCCCEEEEEeC--------CCeEEEEeCCC
Confidence 567778887643 3788998876544331111 1122333333 4556666654 34688888876
Q ss_pred Cc
Q 014195 200 KK 201 (429)
Q Consensus 200 ~~ 201 (429)
.+
T Consensus 171 ~~ 172 (420)
T 3vl1_A 171 GS 172 (420)
T ss_dssp CC
T ss_pred Cc
Confidence 54
No 73
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.93 E-value=0.2 Score=45.86 Aligned_cols=225 Identities=12% Similarity=0.159 Sum_probs=98.2
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCC-----ceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEE
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDN-----TWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFV 194 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~-----~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~ 194 (429)
++.+++.|+.++ .+.+||.... ++..+..+... ...-.+++.. +++.++.|+.+ ..+..
T Consensus 69 ~~~~las~s~D~------~v~iw~~~~~~~~~~~~~~~~~~~~h-~~~V~~v~~sp~g~~las~s~D--------~~v~i 133 (330)
T 2hes_X 69 HTSLLAAGSFDS------TVSIWAKEESADRTFEMDLLAIIEGH-ENEVKGVAWSNDGYYLATCSRD--------KSVWI 133 (330)
T ss_dssp TSSEEEEEETTS------CEEEEEC-------CCCEEEEEEC-----CEEEEEECTTSCEEEEEETT--------SCEEE
T ss_pred CCCEEEEEeCCC------cEEEEEcccCcCccccceeEEEEcCC-CCcEEEEEECCCCCEEEEEeCC--------CEEEE
Confidence 456777777654 3667776432 22222222110 0111223332 56666777643 35667
Q ss_pred EeCCC--CceEeCCCCCCCCCCceEEEE--CCEEEEEeCCCCCCCCccccceEeeeecCCccccceeeccCCCCCCCc-e
Q 014195 195 LDTET--KKWQDLPPLPVPRYAPATQLW--RGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPH-R 269 (429)
Q Consensus 195 yd~~t--~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~-~ 269 (429)
||... ..++.+..+......-..+.. ++.+++.|+.+ ..+..|+.. +..|+....+...... .
T Consensus 134 wd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D-----~~i~iW~~~-------~~~~~~~~~~~~h~~~v~ 201 (330)
T 2hes_X 134 WETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD-----DTVRIWKDY-------DDDWECVAVLNGHEGTVW 201 (330)
T ss_dssp EECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT-----SCEEEEEEE-------TTEEEEEEEECCCSSCEE
T ss_pred EeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC-----CeEEEEECC-------CCCeeEEEEccCCCCcEE
Confidence 77732 334433322211111222222 56677777765 346777642 3444443322211111 1
Q ss_pred eEEEe-C--CEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-C----CCCeEEcCCCCCCCCCcceeEEEECC
Q 014195 270 ACVVV-D--DRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-D----EMKWKVLPSMPKPDSHIEFAWVLVNN 341 (429)
Q Consensus 270 ~~~~~-~--~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~----~~~W~~~~~~~~~r~~~~~~~~~~~~ 341 (429)
++... + +..++.|+.++. -.+|.+. . ...|..+..++......-.+++..++
T Consensus 202 ~~~~~~~~~~~~l~s~s~D~~--------------------v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~ 261 (330)
T 2hes_X 202 SSDFDKTEGVFRLCSGSDDST--------------------VRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFN 261 (330)
T ss_dssp EEEECCSSSSCEEEEEETTSC--------------------EEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTT
T ss_pred EEEecCCCCeeEEEEEeCCCe--------------------EEEEEecCCCccccceeEEeeecccccccceEEEEEcCC
Confidence 22222 2 345566665432 0244442 1 12355444333211111222333455
Q ss_pred EEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEEecccCccee--e-eeeE-EE--CCEEEEEcccC
Q 014195 342 SIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIGKLPYRVK--T-TLAG-YW--NGWLYFTSGQR 404 (429)
Q Consensus 342 ~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v~~lp~~r~--~-~~~~-~~--~~~i~v~GG~~ 404 (429)
.+++.||.++ .|.+||..+..|..+........ . .++. .. ++++++.||.+
T Consensus 262 ~~l~s~~~dg------------~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~D 318 (330)
T 2hes_X 262 GLIASVGADG------------VLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDD 318 (330)
T ss_dssp SCEEEEETTS------------CEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETT
T ss_pred CEEEEEeCCC------------EEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCC
Confidence 5667777543 57888888888866533221111 1 1111 12 46677777754
No 74
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.92 E-value=0.82 Score=40.38 Aligned_cols=171 Identities=13% Similarity=0.045 Sum_probs=80.0
Q ss_pred cceeeeecCCCcccceeeeeeecCCCCe-EEecCCCC-CCCcceeeeecCCCCcCcccccccccccccCCCeEEccCCCC
Q 014195 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-IILPNNGP-QKGENIGVKTKKDVVPKRILPATFQDLPAPELKWEKMKAAPV 110 (429)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~yd~~~~~-~~~p~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 110 (429)
++.||+....+ +.+.+||+. .. ..++.... ..-.+++................+..+|+. .++........
T Consensus 30 ~g~l~v~~~~~-----~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~ 102 (300)
T 2qc5_A 30 DGKVWFTQHKA-----NKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQP 102 (300)
T ss_dssp TSCEEEEETTT-----TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSST
T ss_pred CCCEEEEcCCC-----CeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCC
Confidence 57788865322 257788888 44 33222111 111122221111111111123457778877 66654321111
Q ss_pred CccCCcEEEE-CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCC
Q 014195 111 PRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGP 188 (429)
Q Consensus 111 ~R~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~ 188 (429)
...-++++.. ++.+|+....+ ..+.+||+. .+..... ++.. ...-.+++.. +++||+....
T Consensus 103 ~~~~~~i~~~~~g~l~v~~~~~------~~i~~~~~~-g~~~~~~-~~~~-~~~~~~i~~d~~g~l~v~~~~-------- 165 (300)
T 2qc5_A 103 DSGPYGITEGLNGDIWFTQLNG------DRIGKLTAD-GTIYEYD-LPNK-GSYPAFITLGSDNALWFTENQ-------- 165 (300)
T ss_dssp TCCEEEEEECSTTCEEEEETTT------TEEEEECTT-SCEEEEE-CSST-TCCEEEEEECTTSSEEEEETT--------
T ss_pred CCCCccceECCCCCEEEEccCC------CeEEEECCC-CCEEEcc-CCCC-CCCceeEEECCCCCEEEEecC--------
Confidence 1112233333 56888865321 248889987 6555332 2211 1223344443 5678886421
Q ss_pred CceeEEEeCCCCceEeCCCCCCCCCCceEEEE--CCEEEEEeC
Q 014195 189 TAHTFVLDTETKKWQDLPPLPVPRYAPATQLW--RGRLHVMGG 229 (429)
Q Consensus 189 ~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG 229 (429)
...+++||+ +.+..... ++........+.+ ++.||+...
T Consensus 166 ~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~ 206 (300)
T 2qc5_A 166 NNSIGRITN-TGKLEEYP-LPTNAAAPVGITSGNDGALWFVEI 206 (300)
T ss_dssp TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEET
T ss_pred CCeEEEECC-CCcEEEee-CCCCCCCcceEEECCCCCEEEEcc
Confidence 356889998 66665532 1211112222223 567888753
No 75
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.88 E-value=0.86 Score=40.24 Aligned_cols=120 Identities=7% Similarity=-0.038 Sum_probs=59.6
Q ss_pred cccccccccCCCeEEccCCCCCccCCcEEE-ECCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEE
Q 014195 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQ-IKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMV 168 (429)
Q Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~R~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~ 168 (429)
..+..+|+. ..+...........-++++. -++.+|+....+ ..+.+||+. .+.+.+. ++.. ...-.+++
T Consensus 36 ~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~------~~i~~~~~~-g~~~~~~-~~~~-~~~~~~i~ 105 (299)
T 2z2n_A 36 NMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAA------NKIGRITKK-GIIKEYT-LPNP-DSAPYGIT 105 (299)
T ss_dssp TEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTT------TEEEEECTT-SCEEEEE-CSST-TCCEEEEE
T ss_pred CcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCC------CeEEEECCC-CcEEEEe-CCCc-CCCceeeE
Confidence 346677777 66655432111111122333 256788875321 247889986 4554432 2211 12234455
Q ss_pred Ee-CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEEE-CCEEEEEe
Q 014195 169 TD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW-RGRLHVMG 228 (429)
Q Consensus 169 ~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~lyv~G 228 (429)
.. ++.||+.... ...+.++|+ +.+............-..++.- ++++|+..
T Consensus 106 ~~~~g~l~v~~~~--------~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 158 (299)
T 2z2n_A 106 EGPNGDIWFTEMN--------GNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTE 158 (299)
T ss_dssp ECTTSCEEEEETT--------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEE
T ss_pred ECCCCCEEEEecC--------CceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEe
Confidence 54 5788887431 346888998 5555543211111122233332 56888865
No 76
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=95.87 E-value=0.16 Score=45.35 Aligned_cols=24 Identities=29% Similarity=0.128 Sum_probs=16.8
Q ss_pred hcceeeeecCCCcccceeeeeeecCCCCe
Q 014195 32 VADFFWASSSKFTSSYLNIASNWSPYHNS 60 (429)
Q Consensus 32 ~~~~ly~~GG~~~~~~~~~~~~yd~~~~~ 60 (429)
.++.+++.|+.++ .+..||..+..
T Consensus 27 ~~~~~l~s~~~dg-----~v~vw~~~~~~ 50 (313)
T 3odt_A 27 VDDSKVASVSRDG-----TVRLWSKDDQW 50 (313)
T ss_dssp EETTEEEEEETTS-----EEEEEEESSSE
T ss_pred cCCCEEEEEEcCC-----cEEEEECCCCE
Confidence 4566677787776 56778876666
No 77
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.81 E-value=0.47 Score=45.04 Aligned_cols=201 Identities=11% Similarity=0.066 Sum_probs=101.5
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe--CCEEEEEeCeeCCCCCCCCceeEEEeCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~ 198 (429)
+++.+++++.+... ..++++|+.+.+...+...+. ...+++.. +..|++.+..++ ...++.+|+.
T Consensus 189 dg~~la~~s~~~~~---~~i~~~d~~tg~~~~l~~~~~----~~~~~~~spdg~~la~~~~~~g------~~~i~~~d~~ 255 (415)
T 2hqs_A 189 DGSKLAYVTFESGR---SALVIQTLANGAVRQVASFPR----HNGAPAFSPDGSKLAFALSKTG------SLNLYVMDLA 255 (415)
T ss_dssp TSSEEEEEECTTSS---CEEEEEETTTCCEEEEECCSS----CEEEEEECTTSSEEEEEECTTS------SCEEEEEETT
T ss_pred CCCEEEEEEecCCC---cEEEEEECCCCcEEEeecCCC----cccCEEEcCCCCEEEEEEecCC------CceEEEEECC
Confidence 55555666554322 358999999988776654432 12233332 345665554322 4579999999
Q ss_pred CCceEeCCCCCCCCCCceEEEE--CCEEEEEeCCCCCCCCccccceEeeeecCCccccceeeccCCCCCCCceeEEEeCC
Q 014195 199 TKKWQDLPPLPVPRYAPATQLW--RGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDD 276 (429)
Q Consensus 199 t~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~ 276 (429)
+.+...+...+. ....... +++.++++..... ....|.++ ..+.+-+.+.... ......+..-++
T Consensus 256 ~~~~~~l~~~~~---~~~~~~~spdg~~l~~~s~~~g----~~~i~~~d-----~~~~~~~~l~~~~-~~~~~~~~spdG 322 (415)
T 2hqs_A 256 SGQIRQVTDGRS---NNTEPTWFPDSQNLAFTSDQAG----RPQVYKVN-----INGGAPQRITWEG-SQNQDADVSSDG 322 (415)
T ss_dssp TCCEEECCCCSS---CEEEEEECTTSSEEEEEECTTS----SCEEEEEE-----TTSSCCEECCCSS-SEEEEEEECTTS
T ss_pred CCCEEeCcCCCC---cccceEECCCCCEEEEEECCCC----CcEEEEEE-----CCCCCEEEEecCC-CcccCeEECCCC
Confidence 988776654321 1122222 5554444432211 12334332 3333322221111 111111222356
Q ss_pred EEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCCCCCCCCCcceeEEEECCEEEEEcccCCCCCC
Q 014195 277 RLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPT 355 (429)
Q Consensus 277 ~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~ 355 (429)
+.+++++.... ...++.+| .+.+...+.... .........+++.+++++.+...
T Consensus 323 ~~l~~~~~~~g-------------------~~~i~~~d~~~~~~~~l~~~~----~~~~~~~spdg~~l~~~s~~~~~-- 377 (415)
T 2hqs_A 323 KFMVMVSSNGG-------------------QQHIAKQDLATGGVQVLSSTF----LDETPSLAPNGTMVIYSSSQGMG-- 377 (415)
T ss_dssp SEEEEEEECSS-------------------CEEEEEEETTTCCEEECCCSS----SCEEEEECTTSSEEEEEEEETTE--
T ss_pred CEEEEEECcCC-------------------ceEEEEEECCCCCEEEecCCC----CcCCeEEcCCCCEEEEEEcCCCc--
Confidence 65555543211 11477887 777776655322 11222234567777777654321
Q ss_pred ccceeeeCcEEEEecCCCCeEEec
Q 014195 356 TKKMVLVGEIFQFNLNTLKWHVIG 379 (429)
Q Consensus 356 ~~~~~~~~~i~~yd~~~~~W~~v~ 379 (429)
..++.+|.+......+.
T Consensus 378 -------~~l~~~d~~g~~~~~l~ 394 (415)
T 2hqs_A 378 -------SVLNLVSTDGRFKARLP 394 (415)
T ss_dssp -------EEEEEEETTSCCEEECC
T ss_pred -------cEEEEEECCCCcEEEee
Confidence 27999999887766654
No 78
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.81 E-value=0.69 Score=41.37 Aligned_cols=64 Identities=11% Similarity=0.109 Sum_probs=35.7
Q ss_pred CEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEeC---CEEEEEeCeeCCCCCCCCceeEEEeCC
Q 014195 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDG---RYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (429)
Q Consensus 122 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~---~~lyv~GG~~~~~~~~~~~~~~~yd~~ 198 (429)
+.+++.|+.++ .+.++|..+.+|..+..+... ...-.+++... +.+++.|+.+ ..+..||..
T Consensus 67 g~~l~s~s~D~------~v~iWd~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~g~~l~s~s~d--------~~v~~wd~~ 131 (297)
T 2pm7_B 67 GTILASCSYDG------KVMIWKEENGRWSQIAVHAVH-SASVNSVQWAPHEYGPMLLVASSD--------GKVSVVEFK 131 (297)
T ss_dssp CSEEEEEETTT------EEEEEEBSSSCBCCCEEECCC-SSCEEEEEECCGGGCSEEEEEETT--------SEEEEEEBC
T ss_pred CCEEEEEcCCC------EEEEEEcCCCceEEEEEeecC-CCceeEEEeCcCCCCcEEEEEECC--------CcEEEEEec
Confidence 56777777654 478899988887665433221 11122333322 4566666542 356667776
Q ss_pred CC
Q 014195 199 TK 200 (429)
Q Consensus 199 t~ 200 (429)
+.
T Consensus 132 ~~ 133 (297)
T 2pm7_B 132 EN 133 (297)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 79
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.80 E-value=0.096 Score=48.36 Aligned_cols=105 Identities=11% Similarity=0.154 Sum_probs=55.7
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 199 (429)
++.+++.||.++ .+.+||..+++|.....+.......-.+++.. ++.+++.|+.+ ..+..||..+
T Consensus 27 ~g~~las~~~D~------~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D--------~~v~iw~~~~ 92 (345)
T 3fm0_A 27 AGTLLASCGGDR------RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD--------ATTCIWKKNQ 92 (345)
T ss_dssp TSSCEEEEETTS------CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT--------SCEEEEEECC
T ss_pred CCCEEEEEcCCC------eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC--------CcEEEEEccC
Confidence 567778887654 37788888887753222111111222233332 55667777653 3456677777
Q ss_pred CceEeCCCCCCCCCCceEEEE--CCEEEEEeCCCCCCCCccccceEe
Q 014195 200 KKWQDLPPLPVPRYAPATQLW--RGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 200 ~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
..+..+..+......-..+.+ ++++++.|+.+ ..+..|++
T Consensus 93 ~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D-----~~v~iwd~ 134 (345)
T 3fm0_A 93 DDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD-----KSVWVWEV 134 (345)
T ss_dssp C-EEEEEEECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEEE
T ss_pred CCeEEEEEccCCCCCceEEEEeCCCCEEEEEECC-----CeEEEEEC
Confidence 766544333221111222222 56777787765 34667775
No 80
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.79 E-value=0.6 Score=43.56 Aligned_cols=66 Identities=6% Similarity=-0.105 Sum_probs=34.8
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 199 (429)
++.++++|+.++ .+.+||.....-..+..... .-.+++.. ++..++.++. ...+..||..+
T Consensus 119 ~~~~l~~~~~dg------~i~i~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~~~--------d~~i~iwd~~~ 180 (425)
T 1r5m_A 119 DGNSIVTGVENG------ELRLWNKTGALLNVLNFHRA----PIVSVKWNKDGTHIISMDV--------ENVTILWNVIS 180 (425)
T ss_dssp TSSEEEEEETTS------CEEEEETTSCEEEEECCCCS----CEEEEEECTTSSEEEEEET--------TCCEEEEETTT
T ss_pred CCCEEEEEeCCC------eEEEEeCCCCeeeeccCCCc----cEEEEEECCCCCEEEEEec--------CCeEEEEECCC
Confidence 456777777543 37788844443333322211 12333333 4555555553 34577888877
Q ss_pred CceEe
Q 014195 200 KKWQD 204 (429)
Q Consensus 200 ~~W~~ 204 (429)
.+-..
T Consensus 181 ~~~~~ 185 (425)
T 1r5m_A 181 GTVMQ 185 (425)
T ss_dssp TEEEE
T ss_pred CcEEE
Confidence 66443
No 81
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.69 E-value=0.33 Score=44.89 Aligned_cols=52 Identities=12% Similarity=0.061 Sum_probs=27.5
Q ss_pred ECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEEecccCccee--eeeeEEECCEEEEEcccC
Q 014195 339 VNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIGKLPYRVK--TTLAGYWNGWLYFTSGQR 404 (429)
Q Consensus 339 ~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v~~lp~~r~--~~~~~~~~~~i~v~GG~~ 404 (429)
.++++++.|+.++ .|.+||..+.+= +..+..... ...+...+++.++.|+.+
T Consensus 294 ~~g~~l~~g~~d~------------~i~vwd~~~~~~--~~~l~~h~~~v~~l~~spdg~~l~sgs~D 347 (354)
T 2pbi_B 294 LSGRLLFAGYNDY------------TINVWDVLKGSR--VSILFGHENRVSTLRVSPDGTAFCSGSWD 347 (354)
T ss_dssp TTSSEEEEEETTS------------CEEEEETTTCSE--EEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred CCCCEEEEEECCC------------cEEEEECCCCce--EEEEECCCCcEEEEEECCCCCEEEEEcCC
Confidence 4677777776542 688889866542 222221111 112223456777777654
No 82
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.63 E-value=0.31 Score=45.39 Aligned_cols=106 Identities=8% Similarity=-0.071 Sum_probs=53.8
Q ss_pred ECCEEEEEeccCCCCceeeeEEEEECCCCc----eeeCCCCCCCCccceeeEEEe-C----C---EEEEEeCeeCCCCCC
Q 014195 120 IKNLLYVFAGYGSIDYVHSHVDIYNFTDNT----WGGRFDMPREMAHSHLGMVTD-G----R---YIYVVTGQYGPQCRG 187 (429)
Q Consensus 120 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~----W~~~~~~~~~~~r~~~~~~~~-~----~---~lyv~GG~~~~~~~~ 187 (429)
+...+++.|+.++ .+.+||..+.+ +..+..+... ...-.+++.. + + .+++.|+.+
T Consensus 24 ~~~~~l~s~~~dg------~i~iw~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~g~~~~~l~s~~~d------ 90 (397)
T 1sq9_A 24 ACNSFTVSCSGDG------YLKVWDNKLLDNENPKDKSYSHFVH-KSGLHHVDVLQAIERDAFELCLVATTSFS------ 90 (397)
T ss_dssp ECSSEEEEEETTS------EEEEEESBCCTTCCGGGGEEEEECC-TTCEEEEEEEEEEETTTEEEEEEEEEETT------
T ss_pred ecCCeEEEEcCCC------EEEEEECCCcccccCCCcceEEecC-CCcEEEEEEecccccCCccccEEEEEcCC------
Confidence 3446677777643 47888888776 2222211110 1111223332 3 5 677777643
Q ss_pred CCceeEEEeCCCCc------eEeCCCCCCC---CCCceEEEE-----CCEE-EEEeCCCCCCCCccccceEee
Q 014195 188 PTAHTFVLDTETKK------WQDLPPLPVP---RYAPATQLW-----RGRL-HVMGGSGENRYTPEVDHWSLA 245 (429)
Q Consensus 188 ~~~~~~~yd~~t~~------W~~~~~~p~~---r~~~~~~~~-----~~~l-yv~GG~~~~~~~~~~~~~~~~ 245 (429)
..+..||..+.+ +..+...+.. ..-.++... +++. ++.|+.+ ..+..|++.
T Consensus 91 --g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~ 156 (397)
T 1sq9_A 91 --GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-----GTTYIWKFH 156 (397)
T ss_dssp --SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-----SCEEEEEEE
T ss_pred --CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-----CcEEEEeCC
Confidence 357778877766 6665543311 111222333 4566 7777755 346677754
No 83
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=95.59 E-value=0.47 Score=44.53 Aligned_cols=132 Identities=12% Similarity=0.028 Sum_probs=63.7
Q ss_pred ccccccccccCCCeEEccCCCCCccCCcEEEE-CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeE
Q 014195 89 PATFQDLPAPELKWEKMKAAPVPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGM 167 (429)
Q Consensus 89 ~~~~~~~d~~~~~W~~~~~~p~~R~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~ 167 (429)
...+..+|..+.+............-.+++.. ++.++++|+.++ .+.+||..+.+....-.... ..-.++
T Consensus 112 d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg------~i~iwd~~~~~~~~~~~~~~---~~v~~~ 182 (401)
T 4aez_A 112 ERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNG------LVDIYDVESQTKLRTMAGHQ---ARVGCL 182 (401)
T ss_dssp TTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTS------CEEEEETTTCCEEEEECCCS---SCEEEE
T ss_pred CCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCC------eEEEEECcCCeEEEEecCCC---CceEEE
Confidence 34566677776665444333211111122222 556677776543 47889988776543211111 112333
Q ss_pred EEeCCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEEE--CCEEEEEeCCCCCCCCccccceEe
Q 014195 168 VTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW--RGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 168 ~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
.. ++.+++.|+. ...+..||..+..-... .+......-..+.+ ++++++.|+.++ .+..|++
T Consensus 183 ~~-~~~~l~~~~~--------dg~i~i~d~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~ 246 (401)
T 4aez_A 183 SW-NRHVLSSGSR--------SGAIHHHDVRIANHQIG-TLQGHSSEVCGLAWRSDGLQLASGGNDN-----VVQIWDA 246 (401)
T ss_dssp EE-ETTEEEEEET--------TSEEEEEETTSSSCEEE-EEECCSSCEEEEEECTTSSEEEEEETTS-----CEEEEET
T ss_pred EE-CCCEEEEEcC--------CCCEEEEecccCcceee-EEcCCCCCeeEEEEcCCCCEEEEEeCCC-----eEEEccC
Confidence 44 4556666654 34677888874321111 11111111122222 567777877653 4566663
No 84
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.58 E-value=0.23 Score=44.84 Aligned_cols=103 Identities=9% Similarity=0.012 Sum_probs=49.8
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceee-CCCCCC-CCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGG-RFDMPR-EMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-~~~~~~-~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~ 197 (429)
++++++.|+ + ..+.+||..+.+... +..+.. .....-.+++.. +++.+++|+. ...+..||.
T Consensus 62 ~~~~l~~~~-d------g~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------d~~i~~~d~ 126 (337)
T 1gxr_A 62 PTRHVYTGG-K------GCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE--------ASTLSIWDL 126 (337)
T ss_dssp SSSEEEEEC-B------SEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES--------SSEEEEEEC
T ss_pred CCcEEEEcC-C------CeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcC--------CCcEEEEEC
Confidence 456666665 3 247889987765321 111110 001112233333 4556666653 347888999
Q ss_pred CCCceEeCCCCCCCCCCceEEEE--CCEEEEEeCCCCCCCCccccceE
Q 014195 198 ETKKWQDLPPLPVPRYAPATQLW--RGRLHVMGGSGENRYTPEVDHWS 243 (429)
Q Consensus 198 ~t~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~ 243 (429)
.+.+......+.........+.+ ++++++.|+.++ .+..|+
T Consensus 127 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~v~~~d 169 (337)
T 1gxr_A 127 AAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG-----NIAVWD 169 (337)
T ss_dssp CCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTS-----CEEEEE
T ss_pred CCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCC-----cEEEEe
Confidence 88775444322222222222222 566777776543 355665
No 85
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.58 E-value=1.1 Score=41.67 Aligned_cols=105 Identities=10% Similarity=0.092 Sum_probs=51.9
Q ss_pred CEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCC---ccceeeEEEe--CCEEEEEeCeeCCCCCCCCceeEEEe
Q 014195 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREM---AHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLD 196 (429)
Q Consensus 122 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~---~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd 196 (429)
+.+++.|+.++ .+.+||..+.+-...-..+.+. ...-.+++.. +..+++.|+.++. ...+..||
T Consensus 178 ~~~l~~~~~dg------~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~-----~~~i~~~d 246 (416)
T 2pm9_A 178 AHVFASAGSSN------FASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN-----DPSILIWD 246 (416)
T ss_dssp TTEEEEESSSS------CEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS-----SCCCCEEE
T ss_pred CcEEEEEcCCC------CEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC-----CceEEEEe
Confidence 46777777543 3889999887654332222100 1112333333 2357777764431 12677888
Q ss_pred CCCCceEeCCCCC-CCCCCceEEEE---CCEEEEEeCCCCCCCCccccceE
Q 014195 197 TETKKWQDLPPLP-VPRYAPATQLW---RGRLHVMGGSGENRYTPEVDHWS 243 (429)
Q Consensus 197 ~~t~~W~~~~~~p-~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~ 243 (429)
..+..- .+..+. .....-..+.+ ++++++.|+.++ .+..|+
T Consensus 247 ~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg-----~v~~wd 291 (416)
T 2pm9_A 247 LRNANT-PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDN-----TVLLWN 291 (416)
T ss_dssp TTSTTS-CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSS-----EEEEEC
T ss_pred CCCCCC-CcEEeecCccCceeEEEeCCCCCCeEEEEeCCC-----CEEEee
Confidence 877531 111121 11111122222 567777777653 355565
No 86
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.51 E-value=0.32 Score=44.47 Aligned_cols=104 Identities=6% Similarity=0.011 Sum_probs=47.5
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCC-CccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPRE-MAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~-~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~ 198 (429)
.+ +++.|+.++ .+.+||..++.+..+..+... ....-.+++.. ++.+++.|+.+ ..+..||..
T Consensus 24 ~~-~las~~~D~------~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D--------~~v~iw~~~ 88 (330)
T 2hes_X 24 QG-ILATGSTDR------KIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD--------STVSIWAKE 88 (330)
T ss_dssp TT-EEEEEESSS------CEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT--------SCEEEEEC-
T ss_pred CC-EEEEEcCCC------EEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC--------CcEEEEEcc
Confidence 44 667776543 377888887655443222110 01112233332 55677777653 345566664
Q ss_pred CC-----ceEeCCCCCCCCCCceEEEE--CCEEEEEeCCCCCCCCccccceEe
Q 014195 199 TK-----KWQDLPPLPVPRYAPATQLW--RGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 199 t~-----~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
+. .+..+..+......-..+.+ ++++++.|+.+ ..+..|++
T Consensus 89 ~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D-----~~v~iwd~ 136 (330)
T 2hes_X 89 ESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRD-----KSVWIWET 136 (330)
T ss_dssp ------CCCEEEEEEC----CEEEEEECTTSCEEEEEETT-----SCEEEEEC
T ss_pred cCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCC-----CEEEEEec
Confidence 32 12222111111111112222 56777777765 34667764
No 87
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.51 E-value=0.38 Score=45.85 Aligned_cols=145 Identities=7% Similarity=-0.077 Sum_probs=66.2
Q ss_pred cceeeeecCCCcccceeeeeeecCCCCe--EEecCCCCCCC-cceeee--ecCCCCcCcccccccccccccCCCeEEccC
Q 014195 33 ADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKG-ENIGVK--TKKDVVPKRILPATFQDLPAPELKWEKMKA 107 (429)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~yd~~~~~--~~~p~~~~r~~-~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 107 (429)
++.+.+.|+.+| .+..||..+.. ..+....+... ..+... .+..... -.....+..+|..++....+..
T Consensus 131 ~~~~lasGs~dg-----~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s-~s~D~~v~iwd~~~~~~~~~~~ 204 (435)
T 4e54_B 131 HPSTVAVGSKGG-----DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYA-SSMEGTTRLQDFKGNILRVFAS 204 (435)
T ss_dssp CTTCEEEEETTS-----CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEE-ECSSSCEEEEETTSCEEEEEEC
T ss_pred CCCEEEEEeCCC-----EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEE-EeCCCEEEEeeccCCceeEEec
Confidence 455777788777 56778887766 33322222221 122211 0111110 0122344555655544333322
Q ss_pred CCCCc-cCCcEEEE-CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe--CCEEEEEeCeeCC
Q 014195 108 APVPR-LDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGP 183 (429)
Q Consensus 108 ~p~~R-~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~ 183 (429)
..... ...++... ++.+++.|+.++ .+.++|...+.-..+.... ..-.+++.. ++.+++.|+.+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~l~~g~~dg------~i~~wd~~~~~~~~~~~h~----~~v~~v~~~p~~~~~~~s~s~d-- 272 (435)
T 4e54_B 205 SDTINIWFCSLDVSASSRMVVTGDNVG------NVILLNMDGKELWNLRMHK----KKVTHVALNPCCDWFLATASVD-- 272 (435)
T ss_dssp CSSCSCCCCCEEEETTTTEEEEECSSS------BEEEEESSSCBCCCSBCCS----SCEEEEEECTTCSSEEEEEETT--
T ss_pred cCCCCccEEEEEECCCCCEEEEEeCCC------cEeeeccCcceeEEEeccc----ceEEeeeecCCCceEEEEecCc--
Confidence 22111 11223332 567777887654 3778888765322221111 111233332 34577777643
Q ss_pred CCCCCCceeEEEeCCCCc
Q 014195 184 QCRGPTAHTFVLDTETKK 201 (429)
Q Consensus 184 ~~~~~~~~~~~yd~~t~~ 201 (429)
..+.+||..+.+
T Consensus 273 ------~~v~iwd~~~~~ 284 (435)
T 4e54_B 273 ------QTVKIWDLRQVR 284 (435)
T ss_dssp ------SBCCEEETTTCC
T ss_pred ------ceeeEEeccccc
Confidence 345567876643
No 88
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.48 E-value=0.73 Score=41.19 Aligned_cols=104 Identities=10% Similarity=0.101 Sum_probs=53.8
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe---CCEEEEEeCeeCCCCCCCCceeEEEeC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD---GRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~yd~ 197 (429)
+++.++.|+.++ .+.+||..+++.+.+..+... ...-.+++.. ++.+++.|+.+ ..+..||.
T Consensus 20 ~g~~las~s~D~------~v~iw~~~~~~~~~~~~l~gH-~~~V~~v~~s~~~~g~~l~s~s~D--------~~v~iWd~ 84 (297)
T 2pm7_B 20 YGKRMATCSSDK------TIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHPKFGTILASCSYD--------GKVMIWKE 84 (297)
T ss_dssp TSSEEEEEETTS------CEEEEEBCSSCBCCCEEECCC-SSCEEEEEECCGGGCSEEEEEETT--------TEEEEEEB
T ss_pred CCCEEEEEeCCC------EEEEEecCCCCcEEEEEEccc-cCCeEEEEecCCCcCCEEEEEcCC--------CEEEEEEc
Confidence 466777777654 377888876544433333221 1112233332 25677777643 46778898
Q ss_pred CCCceEeCCCCCCCCCCceEEEE--C--CEEEEEeCCCCCCCCccccceEe
Q 014195 198 ETKKWQDLPPLPVPRYAPATQLW--R--GRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 198 ~t~~W~~~~~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
.+.+|..+..+......-..+.+ + +.+++.|+.++ .+..|++
T Consensus 85 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~-----~v~~wd~ 130 (297)
T 2pm7_B 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDG-----KVSVVEF 130 (297)
T ss_dssp SSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEEB
T ss_pred CCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCC-----cEEEEEe
Confidence 88877655332211111222222 1 45667776553 3455553
No 89
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.40 E-value=1.3 Score=44.99 Aligned_cols=192 Identities=13% Similarity=-0.029 Sum_probs=92.3
Q ss_pred eeeEEEEECCCCceeeCCCCCCCCccceeeEEE-eCCEEEEEeCeeCCCCCCCCceeEEEeCCCC-ceEeCCCCCCCC--
Q 014195 137 HSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTETK-KWQDLPPLPVPR-- 212 (429)
Q Consensus 137 ~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~-~W~~~~~~p~~r-- 212 (429)
...++++|..+.+-..+...... ...-..++. -+++.++++..+.... ...++.+|+.+. ....+.......
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~---~~~v~~~d~~~g~~~~~~~~~~~~~~~ 309 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPK-EKFLTNLSWSPDENILYVAEVNRAQN---ECKVNAYDAETGRFVRTLFVETDKHYV 309 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCT-TCEEEEEEECTTSSEEEEEEECTTSC---EEEEEEEETTTCCEEEEEEEEECSSCC
T ss_pred eeEEEEEECCCCceEeeccCCCC-ceeEeeEEEECCCCEEEEEEeCCCCC---eeEEEEEECCCCceeeEEEEccCCCeE
Confidence 35699999998876655432110 122222333 2444444444333221 468999999988 666543111111
Q ss_pred --CCceEEEE--CCEEEEEeCCCCCCCCccccceEeeeecCCccccceeeccCCCCCCCceeEEEe--CC-EEEEEcccC
Q 014195 213 --YAPATQLW--RGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVV--DD-RLLVIGGQE 285 (429)
Q Consensus 213 --~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~--~~-~iyv~GG~~ 285 (429)
.......- ++++++.+..++ ....|.+. ......+.+..-.... .....+ ++ .||+.+..+
T Consensus 310 ~~~~~~~~sp~~dg~~l~~~~~~g-----~~~l~~~~-----~~~~~~~~l~~~~~~v--~~~~~~spdg~~l~~~~~~~ 377 (706)
T 2z3z_A 310 EPLHPLTFLPGSNNQFIWQSRRDG-----WNHLYLYD-----TTGRLIRQVTKGEWEV--TNFAGFDPKGTRLYFESTEA 377 (706)
T ss_dssp CCCSCCEECTTCSSEEEEEECTTS-----SCEEEEEE-----TTSCEEEECCCSSSCE--EEEEEECTTSSEEEEEESSS
T ss_pred CccCCceeecCCCCEEEEEEccCC-----ccEEEEEE-----CCCCEEEecCCCCeEE--EeeeEEcCCCCEEEEEecCC
Confidence 11122333 777666654432 34556543 3344444443211111 121222 34 466665443
Q ss_pred CCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCCCCCCCCCcceeEEEECCEEEEEcccCCCCCCccceeeeCc
Q 014195 286 GDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGE 364 (429)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~ 364 (429)
+. ....+|.+| .+...+.+.. ..... ......+++.+++...+... -.+
T Consensus 378 ~~------------------~~~~l~~~d~~~~~~~~l~~---~~~~~-~~~~spdg~~l~~~~~~~~~--------p~~ 427 (706)
T 2z3z_A 378 SP------------------LERHFYCIDIKGGKTKDLTP---ESGMH-RTQLSPDGSAIIDIFQSPTV--------PRK 427 (706)
T ss_dssp CT------------------TCBEEEEEETTCCCCEESCC---SSSEE-EEEECTTSSEEEEEEECSSC--------SCE
T ss_pred CC------------------ceEEEEEEEcCCCCceeccC---CCceE-EEEECCCCCEEEEEecCCCC--------CcE
Confidence 21 012488887 6666666552 11111 12233466666666443322 136
Q ss_pred EEEEecCCCC
Q 014195 365 IFQFNLNTLK 374 (429)
Q Consensus 365 i~~yd~~~~~ 374 (429)
++++|.++.+
T Consensus 428 i~l~d~~~~~ 437 (706)
T 2z3z_A 428 VTVTNIGKGS 437 (706)
T ss_dssp EEEEESSSCE
T ss_pred EEEEECCCCe
Confidence 8888887765
No 90
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=95.39 E-value=0.21 Score=46.43 Aligned_cols=68 Identities=10% Similarity=-0.043 Sum_probs=29.2
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCC-CccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPRE-MAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~-~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~ 198 (429)
++.++ +++.++ .+.+||..+++-..+...... ....-.+++.. +++.++.|+.+ ..+..||..
T Consensus 105 d~~~l-~~s~dg------~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d--------g~v~iwd~~ 169 (357)
T 4g56_B 105 EKGIL-VASDSG------AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD--------FSVKVWDLS 169 (357)
T ss_dssp TTEEE-EEETTS------CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT--------SCEEEEETT
T ss_pred CCCEE-EEECCC------EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC--------CeEEEEECC
Confidence 45554 455433 377888877654332221110 01111233332 55667777643 357788988
Q ss_pred CCceE
Q 014195 199 TKKWQ 203 (429)
Q Consensus 199 t~~W~ 203 (429)
+.+-.
T Consensus 170 ~~~~~ 174 (357)
T 4g56_B 170 QKAVL 174 (357)
T ss_dssp TTEEE
T ss_pred CCcEE
Confidence 77543
No 91
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=95.32 E-value=1.2 Score=40.96 Aligned_cols=98 Identities=8% Similarity=-0.045 Sum_probs=47.4
Q ss_pred cccccccCCCeEEccCCCCCccCCcEEEE-CC-EEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEE
Q 014195 92 FQDLPAPELKWEKMKAAPVPRLDGAAIQI-KN-LLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT 169 (429)
Q Consensus 92 ~~~~d~~~~~W~~~~~~p~~R~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~ 169 (429)
++.+|+.+.+++.+... ....-..++.. ++ .||+.+..+.... .-.+|.+|..+.+.+.+...+.. ....+.++.
T Consensus 31 ~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~-~v~~~~~~~~~g~~~~~~~~~~~-~~~p~~~~~ 107 (361)
T 3scy_A 31 TFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQA-AVSAFAFDKEKGTLHLLNTQKTM-GADPCYLTT 107 (361)
T ss_dssp EEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTC-EEEEEEEETTTTEEEEEEEEECS-SSCEEEEEE
T ss_pred EEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCC-cEEEEEEeCCCCcEEEeeEeccC-CCCcEEEEE
Confidence 34556666776665544 21211223332 34 5666654321111 11256666666777766544321 112233344
Q ss_pred eCCEEEEEeCeeCCCCCCCCceeEEEeCCCC
Q 014195 170 DGRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (429)
Q Consensus 170 ~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 200 (429)
.++.||+.... ...+..|+..++
T Consensus 108 dg~~l~~~~~~--------~~~v~~~~~~~~ 130 (361)
T 3scy_A 108 NGKNIVTANYS--------GGSITVFPIGQD 130 (361)
T ss_dssp CSSEEEEEETT--------TTEEEEEEBCTT
T ss_pred CCCEEEEEECC--------CCEEEEEEeCCC
Confidence 55567766421 346777887643
No 92
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=95.31 E-value=0.23 Score=45.96 Aligned_cols=103 Identities=8% Similarity=-0.056 Sum_probs=49.4
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCC-CCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPR-EMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~-~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~ 198 (429)
.+..++.|+.++ .+.+||..+++-........ .....-.+++.. +++.++.|+.+ ..+.++|+.
T Consensus 92 ~d~~l~~~s~dg------~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d--------~~i~iwd~~ 157 (344)
T 4gqb_B 92 GERGILVASDSG------AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD--------ICIKVWDLA 157 (344)
T ss_dssp TTTEEEEEETTS------EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT--------SCEEEEETT
T ss_pred CCCeEEEEECCC------EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC--------CeEEEEECC
Confidence 444455666543 47888988775432211100 000111233332 56677777643 357788988
Q ss_pred CCceEeCCCCCCCCCCceEEEE---CCEEEEEeCCCCCCCCccccceEe
Q 014195 199 TKKWQDLPPLPVPRYAPATQLW---RGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 199 t~~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
+++-... +......-..+.+ +..+++.|+.+ ..+..|++
T Consensus 158 ~~~~~~~--~~~h~~~V~~~~~~~~~~~~l~s~s~D-----~~v~iwd~ 199 (344)
T 4gqb_B 158 QQVVLSS--YRAHAAQVTCVAASPHKDSVFLSCSED-----NRILLWDT 199 (344)
T ss_dssp TTEEEEE--ECCCSSCEEEEEECSSCTTEEEEEETT-----SCEEEEET
T ss_pred CCcEEEE--EcCcCCceEEEEecCCCCCceeeeccc-----cccccccc
Confidence 7653322 1111111112222 33577777765 34667763
No 93
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.31 E-value=0.75 Score=43.47 Aligned_cols=95 Identities=9% Similarity=0.080 Sum_probs=50.4
Q ss_pred ccccccccccCCCeEEccCCCCCccCCcEEEE--CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceee
Q 014195 89 PATFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLG 166 (429)
Q Consensus 89 ~~~~~~~d~~~~~W~~~~~~p~~R~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~ 166 (429)
...+..+|..+++...+-.+......-.++.+ ++..++.|+.++ .+.+||..+.+-........ . ...
T Consensus 124 d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg------~v~iWd~~~~~~~~~~~~h~--~--~v~ 193 (420)
T 4gga_A 124 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA------EVQLWDVQQQKRLRNMTSHS--A--RVG 193 (420)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEEECCCS--S--CEE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCC------eEEEEEcCCCcEEEEEeCCC--C--ceE
Confidence 45667777777766554444332222222222 567777787654 37889988876433221111 1 222
Q ss_pred EEEeCCEEEEEeCeeCCCCCCCCceeEEEeCCCCc
Q 014195 167 MVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKK 201 (429)
Q Consensus 167 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~ 201 (429)
+...++.+++.|+. ...+..+|..+..
T Consensus 194 ~~s~~~~~l~sgs~--------d~~i~~~d~~~~~ 220 (420)
T 4gga_A 194 SLSWNSYILSSGSR--------SGHIHHHDVRVAE 220 (420)
T ss_dssp EEEEETTEEEEEET--------TSEEEEEETTSSS
T ss_pred EEeeCCCEEEEEeC--------CCceeEeeecccc
Confidence 33345566667664 3356666665543
No 94
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.29 E-value=1.6 Score=45.31 Aligned_cols=196 Identities=12% Similarity=0.123 Sum_probs=99.4
Q ss_pred EEEEECCCCceeeCCCCCCCCc-cceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCC--CCC--CC
Q 014195 140 VDIYNFTDNTWGGRFDMPREMA-HSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPL--PVP--RY 213 (429)
Q Consensus 140 ~~~yd~~~~~W~~~~~~~~~~~-r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~--p~~--r~ 213 (429)
+.+||+.+++++.........+ ..-.+++.. ++.||+.. ...+++||+.+++|+..... +.. ..
T Consensus 429 l~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt----------~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (795)
T 4a2l_A 429 LSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT----------LSALVRFNPEQRSFTTIEKEKDGTPVVSK 498 (795)
T ss_dssp EEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE----------SSCEEEEETTTTEEEECCBCTTCCBCCCC
T ss_pred eeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe----------cCceeEEeCCCCeEEEccccccccccCCc
Confidence 7899999998877643211111 112233333 56777653 13578999999999887533 111 11
Q ss_pred CceEEE--ECCEEEEEeCCCCCCCCccccceEeeeecCCccccceeecc------CCCCCCCceeEEE-eCCEEEEEccc
Q 014195 214 APATQL--WRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEI------PIPRGGPHRACVV-VDDRLLVIGGQ 284 (429)
Q Consensus 214 ~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~------~~p~~~~~~~~~~-~~~~iyv~GG~ 284 (429)
...... -++.|++-.. .+ ..+|+ +.+.++ ... .++.... .+++. .++.|++....
T Consensus 499 ~i~~i~~d~~g~lWigt~-~G------l~~~~-------~~~~~~-~~~~~~~~~~l~~~~i-~~i~~d~~g~lWigT~~ 562 (795)
T 4a2l_A 499 QITTLFRDSHKRLWIGGE-EG------LSVFK-------QEGLDI-QKASILPVSNVTKLFT-NCIYEASNGIIWVGTRE 562 (795)
T ss_dssp CEEEEEECTTCCEEEEES-SC------EEEEE-------EETTEE-EECCCSCSCGGGGSCE-EEEEECTTSCEEEEESS
T ss_pred eEEEEEECCCCCEEEEeC-Cc------eEEEe-------CCCCeE-EEecCCCCCCCCCCee-EEEEECCCCCEEEEeCC
Confidence 111122 2567887643 21 22222 444444 211 1222111 12222 25677774421
Q ss_pred CCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCC---CCCCCCCcceeEEEE-CCEEEEEcccCCCCCCccce
Q 014195 285 EGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPS---MPKPDSHIEFAWVLV-NNSIVIVGGTTEKHPTTKKM 359 (429)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~---~~~~r~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~ 359 (429)
. +++|| .+.+++.... +|.. .. .+++.- +|.|++.+.
T Consensus 563 --G----------------------l~~~d~~~~~~~~~~~~~gl~~~--~i-~~i~~d~~g~lWi~t~----------- 604 (795)
T 4a2l_A 563 --G----------------------FYCFNEKDKQIKRYNTTNGLPNN--VV-YGILEDSFGRLWLSTN----------- 604 (795)
T ss_dssp --C----------------------EEEEETTTTEEEEECGGGTCSCS--CE-EEEEECTTSCEEEEET-----------
T ss_pred --C----------------------ceeECCCCCcEEEeCCCCCCchh--he-EEEEECCCCCEEEEcC-----------
Confidence 1 78888 6777776542 3221 11 222222 467887762
Q ss_pred eeeCcEEEEecCCCCeEEec---ccCcceee-eeeEEE-CCEEEEEccc
Q 014195 360 VLVGEIFQFNLNTLKWHVIG---KLPYRVKT-TLAGYW-NGWLYFTSGQ 403 (429)
Q Consensus 360 ~~~~~i~~yd~~~~~W~~v~---~lp~~r~~-~~~~~~-~~~i~v~GG~ 403 (429)
+-+.+|||++.+++... .++..... .+++.. +|.||+ ||.
T Consensus 605 ---~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~-g~~ 649 (795)
T 4a2l_A 605 ---RGISCFNPETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYF-GGI 649 (795)
T ss_dssp ---TEEEEEETTTTEEEEECGGGTCSCSCEEEEEEEECTTSCEEE-EET
T ss_pred ---CceEEEcCCCCcEEEcCCcCCCccccCccCceeECCCCeEEE-ecC
Confidence 15889999999988763 24433332 233333 456555 453
No 95
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.26 E-value=0.12 Score=47.06 Aligned_cols=47 Identities=17% Similarity=0.039 Sum_probs=23.7
Q ss_pred ceeEEEeCCCCceEeCCCCCCCCCCceEEE--ECCEEEEEeCCCCCCCCccccceE
Q 014195 190 AHTFVLDTETKKWQDLPPLPVPRYAPATQL--WRGRLHVMGGSGENRYTPEVDHWS 243 (429)
Q Consensus 190 ~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~ 243 (429)
..+..||..+.+....-.... ..-..+. -++++++.|+.++ .+..|+
T Consensus 195 ~~i~i~d~~~~~~~~~~~~h~--~~v~~~~~s~~~~~l~s~s~Dg-----~i~iwd 243 (340)
T 4aow_A 195 KLVKVWNLANCKLKTNHIGHT--GYLNTVTVSPDGSLCASGGKDG-----QAMLWD 243 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCS--SCEEEEEECTTSSEEEEEETTC-----EEEEEE
T ss_pred CEEEEEECCCCceeeEecCCC--CcEEEEEECCCCCEEEEEeCCC-----eEEEEE
Confidence 356778888765433211111 1111222 2567778887653 355565
No 96
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=95.17 E-value=0.36 Score=43.46 Aligned_cols=101 Identities=10% Similarity=0.095 Sum_probs=50.4
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCCceeEEEeCCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 200 (429)
++.+++.|+.++ .+.+||..+.+-...-.... ..........++++++.|+. ...+..||..+.
T Consensus 24 ~~~~l~s~~~dg------~v~lWd~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~s~s~--------d~~i~vwd~~~~ 87 (304)
T 2ynn_A 24 TEPWVLTTLYSG------RVELWNYETQVEVRSIQVTE--TPVRAGKFIARKNWIIVGSD--------DFRIRVFNYNTG 87 (304)
T ss_dssp SSSEEEEEETTS------EEEEEETTTTEEEEEEECCS--SCEEEEEEEGGGTEEEEEET--------TSEEEEEETTTC
T ss_pred CCCEEEEEcCCC------cEEEEECCCCceeEEeeccC--CcEEEEEEeCCCCEEEEECC--------CCEEEEEECCCC
Confidence 456677777653 47888988775432211111 11112222235556666664 346778888776
Q ss_pred ceEeCCCCCCCCC-CceEEE-ECCEEEEEeCCCCCCCCccccceEe
Q 014195 201 KWQDLPPLPVPRY-APATQL-WRGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 201 ~W~~~~~~p~~r~-~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
+-... +..... -.+++. -++++++.|+.+ ..+..|++
T Consensus 88 ~~~~~--~~~h~~~v~~~~~~~~~~~l~sgs~D-----~~v~lWd~ 126 (304)
T 2ynn_A 88 EKVVD--FEAHPDYIRSIAVHPTKPYVLSGSDD-----LTVKLWNW 126 (304)
T ss_dssp CEEEE--EECCSSCEEEEEECSSSSEEEEEETT-----SCEEEEEG
T ss_pred cEEEE--EeCCCCcEEEEEEcCCCCEEEEECCC-----CeEEEEEC
Confidence 53221 111111 111222 256677777765 34677764
No 97
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=95.16 E-value=0.3 Score=44.27 Aligned_cols=130 Identities=8% Similarity=0.027 Sum_probs=61.2
Q ss_pred cceeeeecCCCcccceeeeeeecCCCCe--EEecCCCCCCCcceeeeecC-CCCcCcccccccccccccCCCe-E-EccC
Q 014195 33 ADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTKK-DVVPKRILPATFQDLPAPELKW-E-KMKA 107 (429)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~yd~~~~~--~~~p~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~W-~-~~~~ 107 (429)
.+.+|+....++ .+..||+.+.+ ..++.. ... .+++..... ...........+..+|..+.+. . .+..
T Consensus 9 ~~~~~v~~~~~~-----~v~~~d~~~~~~~~~~~~~-~~~-~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 9 SNFGIVVEQHLR-----RISFFSTDTLEILNQITLG-YDF-VDTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp CCEEEEEEGGGT-----EEEEEETTTCCEEEEEECC-CCE-EEEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred CCEEEEEecCCC-----eEEEEeCcccceeeeEEcc-CCc-ceEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc
Confidence 567888876544 78899998888 233321 111 122221111 1111111234677788777653 2 2221
Q ss_pred CCCCccCCcEEEE-C-CEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CC-EEEEEeC
Q 014195 108 APVPRLDGAAIQI-K-NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GR-YIYVVTG 179 (429)
Q Consensus 108 ~p~~R~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~-~lyv~GG 179 (429)
...++ ++++.. + ..+| ++...+. ...+.+||+.+++....-+... ..+.+++. ++ .+|+.+.
T Consensus 82 ~~~~~--~~~~~s~dg~~l~-~~~~~~~---~~~i~v~d~~~~~~~~~~~~~~----~~~~~~~spdg~~l~~~~~ 147 (331)
T 3u4y_A 82 GQSSM--ADVDITPDDQFAV-TVTGLNH---PFNMQSYSFLKNKFISTIPIPY----DAVGIAISPNGNGLILIDR 147 (331)
T ss_dssp CSSCC--CCEEECTTSSEEE-ECCCSSS---SCEEEEEETTTTEEEEEEECCT----TEEEEEECTTSSCEEEEEE
T ss_pred CCCCc--cceEECCCCCEEE-EecCCCC---cccEEEEECCCCCeEEEEECCC----CccceEECCCCCEEEEEec
Confidence 11222 213333 3 3566 3322211 1258999999887654322221 12344443 33 5777654
No 98
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.15 E-value=0.3 Score=44.31 Aligned_cols=68 Identities=15% Similarity=0.213 Sum_probs=37.3
Q ss_pred CEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-C--CEEEEEeCeeCCCCCCCCceeEEEeCC
Q 014195 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-G--RYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (429)
Q Consensus 122 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~--~~lyv~GG~~~~~~~~~~~~~~~yd~~ 198 (429)
+.+++.|+.++ .+.+||..+.+|..+..+... ...-.+++.. + +.+++.|+.++ .+..||..
T Consensus 71 ~~~l~s~s~D~------~v~iWd~~~~~~~~~~~~~~h-~~~V~~v~~~p~~~g~~lasgs~D~--------~i~lwd~~ 135 (316)
T 3bg1_A 71 GNILASCSYDR------KVIIWREENGTWEKSHEHAGH-DSSVNSVCWAPHDYGLILACGSSDG--------AISLLTYT 135 (316)
T ss_dssp SSCEEEEETTS------CEEEECCSSSCCCEEEEECCC-SSCCCEEEECCTTTCSCEEEECSSS--------CEEEEEEC
T ss_pred CCEEEEEECCC------EEEEEECCCCcceEEEEccCC-CCceEEEEECCCCCCcEEEEEcCCC--------CEEEEecC
Confidence 56677777653 378899988877654333221 1111233332 2 55677776533 45566766
Q ss_pred CC-ceEe
Q 014195 199 TK-KWQD 204 (429)
Q Consensus 199 t~-~W~~ 204 (429)
+. .|..
T Consensus 136 ~~~~~~~ 142 (316)
T 3bg1_A 136 GEGQWEV 142 (316)
T ss_dssp SSSCEEE
T ss_pred CCCCcce
Confidence 54 4654
No 99
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.12 E-value=0.27 Score=50.95 Aligned_cols=101 Identities=11% Similarity=0.060 Sum_probs=50.1
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEE-eCCEEEEEeCeeCCCCCCCCceeEEEeCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 199 (429)
++..+++|+.++ .+.+||..+++....-.... .. -.+++. -++..+++|+. ...+.+||..+
T Consensus 24 ~~~~la~~~~~g------~v~iwd~~~~~~~~~~~~~~--~~-v~~~~~s~~~~~l~~~~~--------dg~i~vw~~~~ 86 (814)
T 3mkq_A 24 TEPWVLTTLYSG------RVEIWNYETQVEVRSIQVTE--TP-VRAGKFIARKNWIIVGSD--------DFRIRVFNYNT 86 (814)
T ss_dssp SSSEEEEEETTS------EEEEEETTTTEEEEEEECCS--SC-EEEEEEEGGGTEEEEEET--------TSEEEEEETTT
T ss_pred CCCEEEEEeCCC------EEEEEECCCCceEEEEecCC--Cc-EEEEEEeCCCCEEEEEeC--------CCeEEEEECCC
Confidence 455666666432 48889988876543211111 11 122222 24556666653 34688899888
Q ss_pred CceEeCCCCCCCCCCceEEE-ECCEEEEEeCCCCCCCCccccceEe
Q 014195 200 KKWQDLPPLPVPRYAPATQL-WRGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 200 ~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
.+....-.... ..-.+++. -+++.++.|+.+ ..+..|++
T Consensus 87 ~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~d-----g~i~vw~~ 126 (814)
T 3mkq_A 87 GEKVVDFEAHP-DYIRSIAVHPTKPYVLSGSDD-----LTVKLWNW 126 (814)
T ss_dssp CCEEEEEECCS-SCEEEEEECSSSSEEEEEETT-----SEEEEEEG
T ss_pred CcEEEEEecCC-CCEEEEEEeCCCCEEEEEcCC-----CEEEEEEC
Confidence 76543211111 11111222 255566666654 34666763
No 100
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=95.09 E-value=0.91 Score=39.67 Aligned_cols=187 Identities=11% Similarity=-0.016 Sum_probs=92.8
Q ss_pred eeeEEEEECCCCceeeCCCCCCCCccceeeEEE-eCCEEEEEeCeeCCCCCCCCceeEEEeCCC-CceEeCCCCCC-CCC
Q 014195 137 HSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTET-KKWQDLPPLPV-PRY 213 (429)
Q Consensus 137 ~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t-~~W~~~~~~p~-~r~ 213 (429)
...++++|+.+++...+..... . -.+++. -+++.+++++ ...++++|+.+ .+...+..... ...
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~~--~--v~~~~~spdg~~l~~~~---------~~~i~~~d~~~~~~~~~~~~~~~~~~~ 87 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTPE--L--FEAPNWSPDGKYLLLNS---------EGLLYRLSLAGDPSPEKVDTGFATICN 87 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEESS--C--CEEEEECTTSSEEEEEE---------TTEEEEEESSSCCSCEECCCTTCCCBC
T ss_pred ceeEEEEeCCCCceeeeccCCc--c--eEeeEECCCCCEEEEEc---------CCeEEEEeCCCCCCceEeccccccccc
Confidence 3569999999988765543222 1 122222 2455555543 24789999999 87777654332 222
Q ss_pred CceEEEECCEEEEEeCCCCCCCCccccceEeeeecCCccccceeeccCCCCCCCceeEEE-eCCE-EEEEcccCCCCCCC
Q 014195 214 APATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVV-VDDR-LLVIGGQEGDFMAK 291 (429)
Q Consensus 214 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~-~~~~-iyv~GG~~~~~~~~ 291 (429)
......-+++.+++++.... .....|.+. ..+..-+.+..... ...+.. -+++ |++.+..++.
T Consensus 88 ~~~~~spdg~~l~~~~~~~~---~~~~l~~~~-----~~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~~~~~---- 152 (297)
T 2ojh_A 88 NDHGISPDGALYAISDKVEF---GKSAIYLLP-----STGGTPRLMTKNLP---SYWHGWSPDGKSFTYCGIRDQV---- 152 (297)
T ss_dssp SCCEECTTSSEEEEEECTTT---SSCEEEEEE-----TTCCCCEECCSSSS---EEEEEECTTSSEEEEEEEETTE----
T ss_pred cceEECCCCCEEEEEEeCCC---CcceEEEEE-----CCCCceEEeecCCC---ccceEECCCCCEEEEEECCCCc----
Confidence 22223335665566553221 234455543 33333333222221 112222 2444 5544543321
Q ss_pred CCCCccccccCCeeeeCceEEeC-CCCCeEEcCCCCCCCCCcceeEEEECCEEEEEccc-CCCCCCccceeeeCcEEEEe
Q 014195 292 PGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGT-TEKHPTTKKMVLVGEIFQFN 369 (429)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~~~~r~~~~~~~~~~~~~i~v~GG~-~~~~~~~~~~~~~~~i~~yd 369 (429)
..+|.++ .+.....+...+.. ........+++.+++.+. +.. ..+|.++
T Consensus 153 ----------------~~l~~~~~~~~~~~~~~~~~~~---~~~~~~s~dg~~l~~~~~~~~~----------~~i~~~~ 203 (297)
T 2ojh_A 153 ----------------FDIYSMDIDSGVETRLTHGEGR---NDGPDYSPDGRWIYFNSSRTGQ----------MQIWRVR 203 (297)
T ss_dssp ----------------EEEEEEETTTCCEEECCCSSSC---EEEEEECTTSSEEEEEECTTSS----------CEEEEEE
T ss_pred ----------------eEEEEEECCCCcceEcccCCCc---cccceECCCCCEEEEEecCCCC----------ccEEEEC
Confidence 1478877 66666665443211 111112345654444443 322 2788888
Q ss_pred cCCCCeEEecc
Q 014195 370 LNTLKWHVIGK 380 (429)
Q Consensus 370 ~~~~~W~~v~~ 380 (429)
+.......+..
T Consensus 204 ~~~~~~~~~~~ 214 (297)
T 2ojh_A 204 VDGSSVERITD 214 (297)
T ss_dssp TTSSCEEECCC
T ss_pred CCCCCcEEEec
Confidence 87777766643
No 101
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=95.04 E-value=2.2 Score=39.73 Aligned_cols=26 Identities=4% Similarity=-0.259 Sum_probs=18.0
Q ss_pred cceeeeecCCCcccceeeeeeecCCCCe-EEe
Q 014195 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-IIL 63 (429)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~yd~~~~~-~~~ 63 (429)
++.++++|+.++ .+..||..+.. ...
T Consensus 108 ~~~~l~~~~~dg-----~i~iwd~~~~~~~~~ 134 (420)
T 3vl1_A 108 QMRRFILGTTEG-----DIKVLDSNFNLQREI 134 (420)
T ss_dssp SSCEEEEEETTS-----CEEEECTTSCEEEEE
T ss_pred CCCEEEEEECCC-----CEEEEeCCCcceeee
Confidence 556677777666 56788888777 443
No 102
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=95.04 E-value=1.3 Score=39.32 Aligned_cols=15 Identities=0% Similarity=-0.022 Sum_probs=11.0
Q ss_pred cEEEEecCCCCeEEe
Q 014195 364 EIFQFNLNTLKWHVI 378 (429)
Q Consensus 364 ~i~~yd~~~~~W~~v 378 (429)
.+.+||..+.+....
T Consensus 247 ~v~iwd~~~~~~~~~ 261 (313)
T 3odt_A 247 TVRIWSKENGSLKQV 261 (313)
T ss_dssp EEEEECTTTCCEEEE
T ss_pred EEEEEECCCCceeEE
Confidence 688999888765443
No 103
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=95.00 E-value=1.7 Score=38.20 Aligned_cols=220 Identities=9% Similarity=-0.015 Sum_probs=101.7
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCC--CCccceeeEEE--eCCEEEEEeCeeCCCCCCCCceeEEEe
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPR--EMAHSHLGMVT--DGRYIYVVTGQYGPQCRGPTAHTFVLD 196 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~--~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd 196 (429)
++.+|+....+ ..+.+||+....-..+..... .....-.++++ .++.||+..... ...+.+||
T Consensus 40 ~g~l~v~~~~~------~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~-------~~~i~~~d 106 (286)
T 1q7f_A 40 QNDIIVADTNN------HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP-------THQIQIYN 106 (286)
T ss_dssp TCCEEEEEGGG------TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG-------GCEEEEEC
T ss_pred CCCEEEEECCC------CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC-------CCEEEEEC
Confidence 46788875432 348889987554333322110 00112345555 377899886320 24688899
Q ss_pred CCCCceEeCCCCCCCCCCceEEE-ECCEEEEEeCCCCCCCCccccceEeeeecCCccccceeeccCCCCCCCceeEEE-e
Q 014195 197 TETKKWQDLPPLPVPRYAPATQL-WRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVV-V 274 (429)
Q Consensus 197 ~~t~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~-~ 274 (429)
+....-..+..... ..-..++. -++++|+...... .+..|+ +................-..++. -
T Consensus 107 ~~g~~~~~~~~~~~-~~~~~i~~~~~g~l~v~~~~~~-----~i~~~~-------~~g~~~~~~~~~~~~~~p~~i~~~~ 173 (286)
T 1q7f_A 107 QYGQFVRKFGATIL-QHPRGVTVDNKGRIIVVECKVM-----RVIIFD-------QNGNVLHKFGCSKHLEFPNGVVVND 173 (286)
T ss_dssp TTSCEEEEECTTTC-SCEEEEEECTTSCEEEEETTTT-----EEEEEC-------TTSCEEEEEECTTTCSSEEEEEECS
T ss_pred CCCcEEEEecCccC-CCceEEEEeCCCCEEEEECCCC-----EEEEEc-------CCCCEEEEeCCCCccCCcEEEEECC
Confidence 65554433322111 11122332 2577888754321 222222 33222222211111111112332 3
Q ss_pred CCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCCCCCCCCCcceeEEE-ECCEEEEEcccCCC
Q 014195 275 DDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVL-VNNSIVIVGGTTEK 352 (429)
Q Consensus 275 ~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~~~~r~~~~~~~~~-~~~~i~v~GG~~~~ 352 (429)
+++||+....+. .++.|| .......+..... ... ..+++. .+++||+....+.
T Consensus 174 ~g~l~v~~~~~~----------------------~i~~~~~~g~~~~~~~~~g~-~~~-p~~i~~d~~G~l~v~~~~~~- 228 (286)
T 1q7f_A 174 KQEIFISDNRAH----------------------CVKVFNYEGQYLRQIGGEGI-TNY-PIGVGINSNGEILIADNHNN- 228 (286)
T ss_dssp SSEEEEEEGGGT----------------------EEEEEETTCCEEEEESCTTT-SCS-EEEEEECTTCCEEEEECSSS-
T ss_pred CCCEEEEECCCC----------------------EEEEEcCCCCEEEEEccCCc-cCC-CcEEEECCCCCEEEEeCCCC-
Confidence 678988765422 377777 4433333332110 011 122333 4678888874431
Q ss_pred CCCccceeeeCcEEEEecCCCCeEEecc-cCcceeeeeeEEECCEEEEEc
Q 014195 353 HPTTKKMVLVGEIFQFNLNTLKWHVIGK-LPYRVKTTLAGYWNGWLYFTS 401 (429)
Q Consensus 353 ~~~~~~~~~~~~i~~yd~~~~~W~~v~~-lp~~r~~~~~~~~~~~i~v~G 401 (429)
..|.+||++...-..+.. .+.......+...+++||+..
T Consensus 229 ----------~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 229 ----------FNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVLAS 268 (286)
T ss_dssp ----------CEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEEE
T ss_pred ----------EEEEEECCCCCEEEEEcccCCCCcceeEEECCCCcEEEEC
Confidence 168899977654444321 111111122223468888873
No 104
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=94.99 E-value=0.5 Score=46.83 Aligned_cols=101 Identities=9% Similarity=0.061 Sum_probs=47.0
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CC-EEEEEeCeeCCCCCCCCceeEEEeCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GR-YIYVVTGQYGPQCRGPTAHTFVLDTE 198 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~yd~~ 198 (429)
+++.+++++.+... ...++.+|... .-..+.... ..-.+++.. ++ .+++.|+. ...+..||..
T Consensus 127 ~~~~l~~~~~~~~~--~~~v~~~d~~~-~~~~~~~~~----~~v~~~~~~~~~~~~l~~~~~--------d~~v~vwd~~ 191 (615)
T 1pgu_A 127 EGRRLCVVGEGRDN--FGVFISWDSGN-SLGEVSGHS----QRINACHLKQSRPMRSMTVGD--------DGSVVFYQGP 191 (615)
T ss_dssp TSSEEEEEECCSSC--SEEEEETTTCC-EEEECCSCS----SCEEEEEECSSSSCEEEEEET--------TTEEEEEETT
T ss_pred CCCEEEEeccCCCC--ccEEEEEECCC-cceeeecCC----ccEEEEEECCCCCcEEEEEeC--------CCcEEEEeCC
Confidence 45666666654432 23477787322 112221111 112223333 33 36666653 3467788877
Q ss_pred CCceEeCCCCCCCCC---CceEEEE--C-CEEEEEeCCCCCCCCccccceE
Q 014195 199 TKKWQDLPPLPVPRY---APATQLW--R-GRLHVMGGSGENRYTPEVDHWS 243 (429)
Q Consensus 199 t~~W~~~~~~p~~r~---~~~~~~~--~-~~lyv~GG~~~~~~~~~~~~~~ 243 (429)
+.+-... +..... .-..+.+ + +++++.|+.++ .+..|+
T Consensus 192 ~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~vwd 235 (615)
T 1pgu_A 192 PFKFSAS--DRTHHKQGSFVRDVEFSPDSGEFVITVGSDR-----KISCFD 235 (615)
T ss_dssp TBEEEEE--ECSSSCTTCCEEEEEECSTTCCEEEEEETTC-----CEEEEE
T ss_pred Ccceeee--ecccCCCCceEEEEEECCCCCCEEEEEeCCC-----eEEEEE
Confidence 6543322 111111 1222222 4 67777777653 456666
No 105
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=94.96 E-value=0.95 Score=41.81 Aligned_cols=108 Identities=12% Similarity=0.006 Sum_probs=44.5
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceee--CCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGG--RFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~--~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~ 197 (429)
++++++.|+.+........+++|+..+..=.. ....... ...-.+++.. +++++ +++. ...+..||+
T Consensus 53 DG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~-~~~V~~~~~s~d~~~l-~~s~--------dg~v~lWd~ 122 (357)
T 4g56_B 53 DGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQT-EAGVTDVAWVSEKGIL-VASD--------SGAVELWEI 122 (357)
T ss_dssp SSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEEC-SSCEEEEEEETTTEEE-EEET--------TSCEEEC--
T ss_pred CCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCC-CCCEEEEEEcCCCCEE-EEEC--------CCEEEEeec
Confidence 67888888765432223457888776553211 1110000 0111233333 45554 4443 235677887
Q ss_pred CCCceEeCCCCCC-CC-CCceEEE--ECCEEEEEeCCCCCCCCccccceE
Q 014195 198 ETKKWQDLPPLPV-PR-YAPATQL--WRGRLHVMGGSGENRYTPEVDHWS 243 (429)
Q Consensus 198 ~t~~W~~~~~~p~-~r-~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~ 243 (429)
.+.+-..+..... .. ..-..+. -+++.++.|+.++ .+..|+
T Consensus 123 ~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg-----~v~iwd 167 (357)
T 4g56_B 123 LEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDF-----SVKVWD 167 (357)
T ss_dssp ------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTS-----CEEEEE
T ss_pred cccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCC-----eEEEEE
Confidence 7765332221110 11 1111222 2667778877653 466676
No 106
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=94.94 E-value=0.24 Score=45.31 Aligned_cols=63 Identities=6% Similarity=-0.073 Sum_probs=37.9
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEE---eCCEEEEEeCeeCCCCCCCCceeEEEeC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT---DGRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~---~~~~lyv~GG~~~~~~~~~~~~~~~yd~ 197 (429)
++..++.|+.++ .+.+||..+.+...+..... .-.+++. .++.+++.|+. ...+..||.
T Consensus 97 ~~~~l~s~~~dg------~v~iwd~~~~~~~~~~~~~~----~v~~~~~~~~~~~~~l~~~~~--------dg~i~vwd~ 158 (368)
T 3mmy_A 97 DGSKVFTASCDK------TAKMWDLSSNQAIQIAQHDA----PVKTIHWIKAPNYSCVMTGSW--------DKTLKFWDT 158 (368)
T ss_dssp TSSEEEEEETTS------EEEEEETTTTEEEEEEECSS----CEEEEEEEECSSCEEEEEEET--------TSEEEEECS
T ss_pred CCCEEEEEcCCC------cEEEEEcCCCCceeeccccC----ceEEEEEEeCCCCCEEEEccC--------CCcEEEEEC
Confidence 556666776543 48899998887655432222 1223333 35677777764 346788888
Q ss_pred CCCc
Q 014195 198 ETKK 201 (429)
Q Consensus 198 ~t~~ 201 (429)
.+.+
T Consensus 159 ~~~~ 162 (368)
T 3mmy_A 159 RSSN 162 (368)
T ss_dssp SCSS
T ss_pred CCCc
Confidence 7754
No 107
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=94.89 E-value=0.79 Score=41.72 Aligned_cols=67 Identities=4% Similarity=0.018 Sum_probs=34.5
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 199 (429)
++..++.|+.++ .+.+||..+.+-...-..+. + -.+++.. ++..+++++.+.... ...+..||..+
T Consensus 85 ~~~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~--~--v~~~~~~~~~~~l~~~~~~~~~~---~g~i~~~d~~~ 151 (369)
T 3zwl_B 85 FTKYCVTGSADY------SIKLWDVSNGQCVATWKSPV--P--VKRVEFSPCGNYFLAILDNVMKN---PGSINIYEIER 151 (369)
T ss_dssp TSSEEEEEETTT------EEEEEETTTCCEEEEEECSS--C--EEEEEECTTSSEEEEEECCBTTB---CCEEEEEEEEE
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEEeecCC--C--eEEEEEccCCCEEEEecCCccCC---CCEEEEEEecC
Confidence 456667776543 48899998876544322222 1 1222322 445555554331111 24677777665
Q ss_pred C
Q 014195 200 K 200 (429)
Q Consensus 200 ~ 200 (429)
.
T Consensus 152 ~ 152 (369)
T 3zwl_B 152 D 152 (369)
T ss_dssp C
T ss_pred C
Confidence 4
No 108
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=94.88 E-value=0.34 Score=43.94 Aligned_cols=104 Identities=10% Similarity=0.071 Sum_probs=53.4
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe---CCEEEEEeCeeCCCCCCCCceeEEEeC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD---GRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~yd~ 197 (429)
++..++.|+.++ .+.+||..+++...+..+... ...-.+++.. ++.+++.|+.+ ..+..||+
T Consensus 24 ~g~~lasgs~D~------~v~lwd~~~~~~~~~~~l~gH-~~~V~~v~~~~~~~~~~l~s~s~D--------~~v~iWd~ 88 (316)
T 3bg1_A 24 YGTRLATCSSDR------SVKIFDVRNGGQILIADLRGH-EGPVWQVAWAHPMYGNILASCSYD--------RKVIIWRE 88 (316)
T ss_dssp GGCEEEEEETTT------EEEEEEEETTEEEEEEEEECC-SSCEEEEEECCGGGSSCEEEEETT--------SCEEEECC
T ss_pred CCCEEEEEeCCC------eEEEEEecCCCcEEEEEEcCC-CccEEEEEeCCCCCCCEEEEEECC--------CEEEEEEC
Confidence 456677777543 377888877654333222211 1112233332 25667777643 35778888
Q ss_pred CCCceEeCCCCCCCCCCceEEEE--C--CEEEEEeCCCCCCCCccccceEe
Q 014195 198 ETKKWQDLPPLPVPRYAPATQLW--R--GRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 198 ~t~~W~~~~~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
.+.+|..+..+......-..+.+ + +.+++.|+.++ .+..|++
T Consensus 89 ~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~-----~i~lwd~ 134 (316)
T 3bg1_A 89 ENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG-----AISLLTY 134 (316)
T ss_dssp SSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSS-----CEEEEEE
T ss_pred CCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCC-----CEEEEec
Confidence 88777554322211111222222 2 56777777653 4556664
No 109
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=94.88 E-value=1.9 Score=37.98 Aligned_cols=118 Identities=11% Similarity=0.109 Sum_probs=59.5
Q ss_pred cccccccccCCCeEEccCCCCC-ccCCcEEEE-CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeE
Q 014195 90 ATFQDLPAPELKWEKMKAAPVP-RLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGM 167 (429)
Q Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~-R~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~ 167 (429)
..+..+|+. .+..... ++.. ..-++++.- ++.+|+....+ ..+.+||+. +++.... ++.. ...-+++
T Consensus 41 ~~v~~~~~~-~~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~------~~v~~~d~~-g~~~~~~-~~~~-~~~~~~i 109 (300)
T 2qc5_A 41 NKISSLDQS-GRIKEFE-VPTPDAKVMCLIVSSLGDIWFTENGA------NKIGKLSKK-GGFTEYP-LPQP-DSGPYGI 109 (300)
T ss_dssp TEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSCEEEEETTT------TEEEEECTT-SCEEEEE-CSST-TCCEEEE
T ss_pred CeEEEECCC-CceEEEE-CCCCCCcceeEEECCCCCEEEEecCC------CeEEEECCC-CCeEEec-CCCC-CCCCccc
Confidence 456677776 5555432 1211 111223332 46788865321 248899988 6665442 2211 1223445
Q ss_pred EEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCC-CCCceEEE-ECCEEEEEe
Q 014195 168 VTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVP-RYAPATQL-WRGRLHVMG 228 (429)
Q Consensus 168 ~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~-r~~~~~~~-~~~~lyv~G 228 (429)
+.. ++.+|+.... ...+.+||+. .+..... ++.. ..-..++. -+++||+..
T Consensus 110 ~~~~~g~l~v~~~~--------~~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~ 163 (300)
T 2qc5_A 110 TEGLNGDIWFTQLN--------GDRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNALWFTE 163 (300)
T ss_dssp EECSTTCEEEEETT--------TTEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSSEEEEE
T ss_pred eECCCCCEEEEccC--------CCeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCCEEEEe
Confidence 544 6788887421 3468889987 5555332 1211 11122332 256788865
No 110
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=94.87 E-value=0.3 Score=46.30 Aligned_cols=99 Identities=11% Similarity=0.046 Sum_probs=49.3
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 199 (429)
++.+++.|+.++. +.+||..+.+-.. .+... ...-.+++.. ++..++.|+. ...+..||..+
T Consensus 161 ~~~~l~sgs~D~~------i~iwd~~~~~~~~--~~~~h-~~~V~~v~~~p~~~~l~s~s~--------D~~i~~wd~~~ 223 (410)
T 1vyh_C 161 SGKLLASCSADMT------IKLWDFQGFECIR--TMHGH-DHNVSSVSIMPNGDHIVSASR--------DKTIKMWEVQT 223 (410)
T ss_dssp TSSEEEEEETTSC------CCEEETTSSCEEE--CCCCC-SSCEEEEEECSSSSEEEEEET--------TSEEEEEETTT
T ss_pred CCCEEEEEeCCCe------EEEEeCCCCceeE--EEcCC-CCCEEEEEEeCCCCEEEEEeC--------CCeEEEEECCC
Confidence 4667788876543 5678876654322 22221 1112233332 4556666664 34677888887
Q ss_pred CceEeCCCCCCCCCCceEEE--ECCEEEEEeCCCCCCCCccccceE
Q 014195 200 KKWQDLPPLPVPRYAPATQL--WRGRLHVMGGSGENRYTPEVDHWS 243 (429)
Q Consensus 200 ~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~ 243 (429)
..-... +.........+. .++++++.|+.++ .+..|+
T Consensus 224 ~~~~~~--~~~h~~~v~~~~~~~~g~~l~s~s~D~-----~v~vwd 262 (410)
T 1vyh_C 224 GYCVKT--FTGHREWVRMVRPNQDGTLIASCSNDQ-----TVRVWV 262 (410)
T ss_dssp CCEEEE--EECCSSCEEEEEECTTSSEEEEEETTS-----CEEEEE
T ss_pred CcEEEE--EeCCCccEEEEEECCCCCEEEEEcCCC-----eEEEEE
Confidence 653221 111111111222 2566777777653 355555
No 111
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=94.82 E-value=0.61 Score=44.27 Aligned_cols=101 Identities=8% Similarity=-0.011 Sum_probs=54.3
Q ss_pred cccccccccCCCeEEccCCCCCccCCcEEEE-CC-EEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeE
Q 014195 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQI-KN-LLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGM 167 (429)
Q Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~R~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~ 167 (429)
..+..+|..+.+...+...+. ...+.+.. ++ +|++.+..++. ..++++|+.+.+...+..... . ...+
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~--~~~~~~~spdg~~la~~~~~~g~----~~i~~~d~~~~~~~~l~~~~~--~--~~~~ 272 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR--HNGAPAFSPDGSKLAFALSKTGS----LNLYVMDLASGQIRQVTDGRS--N--NTEP 272 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS--CEEEEEECTTSSEEEEEECTTSS----CEEEEEETTTCCEEECCCCSS--C--EEEE
T ss_pred cEEEEEECCCCcEEEeecCCC--cccCEEEcCCCCEEEEEEecCCC----ceEEEEECCCCCEEeCcCCCC--c--ccce
Confidence 356677877776665544332 11122222 44 45545544332 359999999988776654332 1 1223
Q ss_pred EEe-CCE-EEEEeCeeCCCCCCCCceeEEEeCCCCceEeCC
Q 014195 168 VTD-GRY-IYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP 206 (429)
Q Consensus 168 ~~~-~~~-lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~ 206 (429)
+.. +++ |++.+..++ ...++.+|..+.+-..+.
T Consensus 273 ~~spdg~~l~~~s~~~g------~~~i~~~d~~~~~~~~l~ 307 (415)
T 2hqs_A 273 TWFPDSQNLAFTSDQAG------RPQVYKVNINGGAPQRIT 307 (415)
T ss_dssp EECTTSSEEEEEECTTS------SCEEEEEETTSSCCEECC
T ss_pred EECCCCCEEEEEECCCC------CcEEEEEECCCCCEEEEe
Confidence 332 444 444432111 457999999988755543
No 112
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=94.79 E-value=1.8 Score=38.33 Aligned_cols=210 Identities=15% Similarity=0.060 Sum_probs=102.8
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCc--eeeCCCCCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCCceeEEEeCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~ 198 (429)
.+.++++|..+ ..+.++|+++.+ |+.-..-. ...+...+.-++++++.+ ...+..||++
T Consensus 4 ~~~~lv~~~~~------~~v~~~d~~tG~~~w~~~~~~~---~~~~~~~~~pdG~ilvs~----------~~~V~~~d~~ 64 (276)
T 3no2_A 4 PQHLLVGGSGW------NKIAIINKDTKEIVWEYPLEKG---WECNSVAATKAGEILFSY----------SKGAKMITRD 64 (276)
T ss_dssp CCEEEEECTTC------SEEEEEETTTTEEEEEEECCTT---CCCCEEEECTTSCEEEEC----------BSEEEEECTT
T ss_pred CCcEEEeeCCC------CEEEEEECCCCeEEEEeCCCcc---CCCcCeEECCCCCEEEeC----------CCCEEEECCC
Confidence 45677776543 348889987775 66532211 122334444577888732 2468889983
Q ss_pred CC-ceEeCCCCCCCCCCceEE-EECCEEEEEeCCCCCCCCccccceEeeeecCCccc-cceeeccC----CCCCCCceeE
Q 014195 199 TK-KWQDLPPLPVPRYAPATQ-LWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLE-KEWRTEIP----IPRGGPHRAC 271 (429)
Q Consensus 199 t~-~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~-~~W~~~~~----~p~~~~~~~~ 271 (429)
.. .|+.-.+. ....+++. ..++++++...... ...+.+ |+.. ..|+.... .+........
T Consensus 65 G~~~W~~~~~~--~~~~~~~~~~~dG~~lv~~~~~~------~~v~~v-----d~~Gk~l~~~~~~~~~~~~~~~~~~v~ 131 (276)
T 3no2_A 65 GRELWNIAAPA--GCEMQTARILPDGNALVAWCGHP------STILEV-----NMKGEVLSKTEFETGIERPHAQFRQIN 131 (276)
T ss_dssp SCEEEEEECCT--TCEEEEEEECTTSCEEEEEESTT------EEEEEE-----CTTSCEEEEEEECCSCSSGGGSCSCCE
T ss_pred CCEEEEEcCCC--CccccccEECCCCCEEEEecCCC------CEEEEE-----eCCCCEEEEEeccCCCCcccccccCce
Confidence 22 36654321 11122222 23666666543211 111111 2322 12332111 0101111233
Q ss_pred EEeCCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-C-CCCeEEcCCCCCCCCCcceeEEEECCEEEEEccc
Q 014195 272 VVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-D-EMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGT 349 (429)
Q Consensus 272 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~-~~~W~~~~~~~~~r~~~~~~~~~~~~~i~v~GG~ 349 (429)
...++.+++....++ .++.|| . +..|+.-.. ..| ..+.+..++.+++.+..
T Consensus 132 ~~~~G~~lv~~~~~~----------------------~v~~~d~~G~~~w~~~~~-~~~----~~~~~~~~g~~~v~~~~ 184 (276)
T 3no2_A 132 KNKKGNYLVPLFATS----------------------EVREIAPNGQLLNSVKLS-GTP----FSSAFLDNGDCLVACGD 184 (276)
T ss_dssp ECTTSCEEEEETTTT----------------------EEEEECTTSCEEEEEECS-SCC----CEEEECTTSCEEEECBT
T ss_pred ECCCCCEEEEecCCC----------------------EEEEECCCCCEEEEEECC-CCc----cceeEcCCCCEEEEeCC
Confidence 445667666554321 378888 4 445765432 111 12234557788887754
Q ss_pred CCCCCCccceeeeCcEEEEecCCC--CeEEec-ccCccee--eee-eEEECCEEEEEc
Q 014195 350 TEKHPTTKKMVLVGEIFQFNLNTL--KWHVIG-KLPYRVK--TTL-AGYWNGWLYFTS 401 (429)
Q Consensus 350 ~~~~~~~~~~~~~~~i~~yd~~~~--~W~~v~-~lp~~r~--~~~-~~~~~~~i~v~G 401 (429)
+ ..+..+|+++. .|+.-. .++..+. ..+ ....++.+|+..
T Consensus 185 ~------------~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 185 A------------HCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp T------------SEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred C------------CeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 3 25899999854 466532 2332221 122 334578899887
No 113
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=94.78 E-value=0.25 Score=45.52 Aligned_cols=159 Identities=10% Similarity=0.156 Sum_probs=76.9
Q ss_pred CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCC-CCceEEEE--CCEEEEEeCCCCCCCCccccceEeeee
Q 014195 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPR-YAPATQLW--RGRLHVMGGSGENRYTPEVDHWSLAVK 247 (429)
Q Consensus 171 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r-~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~ 247 (429)
++++++.||.+ ..+..||..+++|.....+.... ..-..+.+ ++++++.|+.++ .+..|+..
T Consensus 27 ~g~~las~~~D--------~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~-----~v~iw~~~-- 91 (345)
T 3fm0_A 27 AGTLLASCGGD--------RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA-----TTCIWKKN-- 91 (345)
T ss_dssp TSSCEEEEETT--------SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEEC--
T ss_pred CCCEEEEEcCC--------CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC-----cEEEEEcc--
Confidence 56677777643 35667888887775432211111 11122222 567778877653 45667642
Q ss_pred cCCccccceeeccCCCCCCCceeEEE--eCCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeCCCCCeEEcCCC
Q 014195 248 DGKPLEKEWRTEIPIPRGGPHRACVV--VDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLDDEMKWKVLPSM 325 (429)
Q Consensus 248 ~~d~~~~~W~~~~~~p~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~W~~~~~~ 325 (429)
+..++....+........++. -++++++.|+.++. -.+|..+....+..+..+
T Consensus 92 -----~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~--------------------v~iwd~~~~~~~~~~~~~ 146 (345)
T 3fm0_A 92 -----QDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKS--------------------VWVWEVDEEDEYECVSVL 146 (345)
T ss_dssp -----CC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC--------------------EEEEEECTTSCEEEEEEE
T ss_pred -----CCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCe--------------------EEEEECCCCCCeEEEEEe
Confidence 333332222221111112222 26677777876533 013443333344433322
Q ss_pred CCCCCCcceeEEEECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEEeccc
Q 014195 326 PKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIGKL 381 (429)
Q Consensus 326 ~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v~~l 381 (429)
..............++++++.|+.++ .+.+||..+..|..+..+
T Consensus 147 ~~h~~~v~~~~~~p~~~~l~s~s~d~------------~i~~w~~~~~~~~~~~~~ 190 (345)
T 3fm0_A 147 NSHTQDVKHVVWHPSQELLASASYDD------------TVKLYREEEDDWVCCATL 190 (345)
T ss_dssp CCCCSCEEEEEECSSSSCEEEEETTS------------CEEEEEEETTEEEEEEEE
T ss_pred cCcCCCeEEEEECCCCCEEEEEeCCC------------cEEEEEecCCCEEEEEEe
Confidence 22222212212234567777777643 577888888887654433
No 114
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=94.77 E-value=0.33 Score=53.10 Aligned_cols=101 Identities=6% Similarity=-0.058 Sum_probs=53.8
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCCceeEEEeCCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 200 (429)
++..++.|+.++ .+.+||..+++...+..... .-.+++...+..++.|+. ...+..||..+.
T Consensus 1014 dg~~l~s~~~dg------~i~vwd~~~~~~~~~~~~~~----~v~~~~~~~~~~l~~~~~--------dg~v~vwd~~~~ 1075 (1249)
T 3sfz_A 1014 DGKTLISSSEDS------VIQVWNWQTGDYVFLQAHQE----TVKDFRLLQDSRLLSWSF--------DGTVKVWNVITG 1075 (1249)
T ss_dssp SSSCEEEECSSS------BEEEEETTTTEEECCBCCSS----CEEEEEECSSSEEEEEES--------SSEEEEEETTTT
T ss_pred CCCEEEEEcCCC------EEEEEECCCCceEEEecCCC----cEEEEEEcCCCcEEEEEC--------CCcEEEEECCCC
Confidence 556677776543 48899999887765433222 123333443434455553 346788888876
Q ss_pred ceEeCCCCCCCCCCceEEEECCEEEEEeCCCCCCCCccccceEe
Q 014195 201 KWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 201 ~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
+-...-..........+..-++++++.|+.++ .+..|++
T Consensus 1076 ~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~-----~v~iwd~ 1114 (1249)
T 3sfz_A 1076 RIERDFTCHQGTVLSCAISSDATKFSSTSADK-----TAKIWSF 1114 (1249)
T ss_dssp CCCEEEECCSSCCCCEEECSSSSSCEEECCSS-----CCCEECS
T ss_pred ceeEEEcccCCcEEEEEECCCCCEEEEEcCCC-----cEEEEEC
Confidence 53321111111122222234667777777653 4666763
No 115
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=94.77 E-value=1.8 Score=41.52 Aligned_cols=48 Identities=19% Similarity=0.342 Sum_probs=32.9
Q ss_pred CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeC--CCCCCCCCCceEEEECCEEEEEeCCC
Q 014195 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDL--PPLPVPRYAPATQLWRGRLHVMGGSG 231 (429)
Q Consensus 171 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~--~~~p~~r~~~~~~~~~~~lyv~GG~~ 231 (429)
++++|+|-| +..|+||..+++...- +.+| . --++....+++|+|-|..
T Consensus 158 ~~~~yfFkG----------~~yw~yd~~~~~~~~~~w~gi~--~-iDAA~~~~g~~YfFkG~~ 207 (460)
T 1qhu_A 158 DEGILFFQG----------NRKWFWDLTTGTKKERSWPAVG--N-CTSALRWLGRYYCFQGNQ 207 (460)
T ss_dssp SSEEEEEET----------TEEEEEETTTTEEEEECCTTSC--C-CSEEEEETTEEEEEETTE
T ss_pred CCeEEEEec----------ccEEEEecccceeecccCCCCC--c-cchheeeCCceEEEECCE
Confidence 678898866 3679999988765432 2233 2 345566689999998864
No 116
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=94.77 E-value=0.59 Score=41.82 Aligned_cols=99 Identities=9% Similarity=0.061 Sum_probs=51.9
Q ss_pred CCEEEEEeccCC-CCceeeeEEEEECCCCceeeCCCCC-CCCccceeeEEEe-C-CEEEEEeCeeCCCCCCCCceeEEEe
Q 014195 121 KNLLYVFAGYGS-IDYVHSHVDIYNFTDNTWGGRFDMP-REMAHSHLGMVTD-G-RYIYVVTGQYGPQCRGPTAHTFVLD 196 (429)
Q Consensus 121 ~~~iyv~GG~~~-~~~~~~~~~~yd~~~~~W~~~~~~~-~~~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~~~~yd 196 (429)
++.+|+...... .......+.+||+.++++..+.... ......-.+++.. + ++||+... ...+++||
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~---------~~~l~~~d 98 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM---------RLGLLVVQ 98 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET---------TTEEEEEE
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC---------CCCEEEEe
Confidence 567888721000 0001235889999998887653200 0001122344443 4 78898753 23688999
Q ss_pred CCCCceEeC-CCCCC--CC-CCceEEE-ECCEEEEEeC
Q 014195 197 TETKKWQDL-PPLPV--PR-YAPATQL-WRGRLHVMGG 229 (429)
Q Consensus 197 ~~t~~W~~~-~~~p~--~r-~~~~~~~-~~~~lyv~GG 229 (429)
++ .+...+ ..... +. .-..++. -++++|+...
T Consensus 99 ~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 135 (314)
T 1pjx_A 99 TD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAP 135 (314)
T ss_dssp TT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEEC
T ss_pred CC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEec
Confidence 98 777665 32221 11 1223332 3678888754
No 117
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=94.76 E-value=0.61 Score=41.21 Aligned_cols=135 Identities=10% Similarity=-0.019 Sum_probs=78.9
Q ss_pred ceEEEECCEEEEEeCCCCCCCCccccceEeeeecCCccccceeeccCCCCCCCceeEEEeCCEEEEEcccCCCCCCCCCC
Q 014195 215 PATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGS 294 (429)
Q Consensus 215 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 294 (429)
.++...++.||+..|..+. +..+ |+++.+=.... ++...++.+++..+++||+....++
T Consensus 58 qGL~~~~~~Ly~stG~~g~-----v~~i-------D~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~-------- 116 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQGT-----LRQL-------SLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEG-------- 116 (268)
T ss_dssp EEEEEETTEEEEEETTTTE-----EEEC-------CSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSC--------
T ss_pred ceEEEECCEEEEEcCCCCE-----EEEE-------ECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCC--------
Confidence 4555668999999997643 2222 35555444433 6666666678888999999865432
Q ss_pred CccccccCCeeeeCceEEeCCCCCeEEcCCCCCCCCCcceeEEEECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCC
Q 014195 295 PIFKCSRRNEVVYDDVYMLDDEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLK 374 (429)
Q Consensus 295 ~~~~~~~~~~~~~~~v~~~d~~~~W~~~~~~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~ 374 (429)
.++.|| ..+-+.+...+.+.. +.+++.-++++|+.-|. +.++.+||++.+
T Consensus 117 --------------~v~V~D-~~Tl~~~~ti~~~~e--GwGLt~Dg~~L~vSdGs-------------~~l~~iDp~T~~ 166 (268)
T 3nok_A 117 --------------LLFTWS-GMPPQRERTTRYSGE--GWGLCYWNGKLVRSDGG-------------TMLTFHEPDGFA 166 (268)
T ss_dssp --------------EEEEEE-TTTTEEEEEEECSSC--CCCEEEETTEEEEECSS-------------SEEEEECTTTCC
T ss_pred --------------EEEEEE-CCcCcEEEEEeCCCc--eeEEecCCCEEEEECCC-------------CEEEEEcCCCCe
Confidence 488897 233333333333322 33446667788887652 279999999876
Q ss_pred eEEe---cccCccee-eeeeEEECCEEEEE
Q 014195 375 WHVI---GKLPYRVK-TTLAGYWNGWLYFT 400 (429)
Q Consensus 375 W~~v---~~lp~~r~-~~~~~~~~~~i~v~ 400 (429)
-..- ..-+.+.. --.+...+++||+-
T Consensus 167 v~~~I~V~~~g~~v~~lNeLe~~dG~lyan 196 (268)
T 3nok_A 167 LVGAVQVKLRGQPVELINELECANGVIYAN 196 (268)
T ss_dssp EEEEEECEETTEECCCEEEEEEETTEEEEE
T ss_pred EEEEEEeCCCCcccccccccEEeCCEEEEE
Confidence 4331 12122211 12233457777753
No 118
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=94.73 E-value=2.4 Score=38.55 Aligned_cols=66 Identities=6% Similarity=0.026 Sum_probs=38.9
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 199 (429)
++.+++.|+.++ .+.+||..+.+-..+..... ...-.+++.. ++.+++.|+. ...+..||..+
T Consensus 138 ~~~~l~s~s~dg------~i~~wd~~~~~~~~~~~~~~--~~~i~~~~~~pdg~~lasg~~--------dg~i~iwd~~~ 201 (343)
T 3lrv_A 138 NTEYFIWADNRG------TIGFQSYEDDSQYIVHSAKS--DVEYSSGVLHKDSLLLALYSP--------DGILDVYNLSS 201 (343)
T ss_dssp -CCEEEEEETTC------CEEEEESSSSCEEEEECCCS--SCCCCEEEECTTSCEEEEECT--------TSCEEEEESSC
T ss_pred CCCEEEEEeCCC------cEEEEECCCCcEEEEEecCC--CCceEEEEECCCCCEEEEEcC--------CCEEEEEECCC
Confidence 456677777554 37889998877644322222 1112233333 6677777774 34678899887
Q ss_pred Cce
Q 014195 200 KKW 202 (429)
Q Consensus 200 ~~W 202 (429)
.+-
T Consensus 202 ~~~ 204 (343)
T 3lrv_A 202 PDQ 204 (343)
T ss_dssp TTS
T ss_pred CCC
Confidence 653
No 119
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.73 E-value=0.38 Score=49.83 Aligned_cols=101 Identities=8% Similarity=0.076 Sum_probs=49.6
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 199 (429)
++..+++|+.++ .+.+||..+.+....-.... ..-.+++.. ++..++.|+. ...+..||..+
T Consensus 66 ~~~~l~~~~~dg------~i~vw~~~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~~--------dg~i~vw~~~~ 128 (814)
T 3mkq_A 66 RKNWIIVGSDDF------RIRVFNYNTGEKVVDFEAHP---DYIRSIAVHPTKPYVLSGSD--------DLTVKLWNWEN 128 (814)
T ss_dssp GGTEEEEEETTS------EEEEEETTTCCEEEEEECCS---SCEEEEEECSSSSEEEEEET--------TSEEEEEEGGG
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEEEecCC---CCEEEEEEeCCCCEEEEEcC--------CCEEEEEECCC
Confidence 556677776532 48899998877643211111 112223332 4445555553 34677888876
Q ss_pred C-ceEeCCCCCCCCCCceEEEE--CCEEEEEeCCCCCCCCccccceEe
Q 014195 200 K-KWQDLPPLPVPRYAPATQLW--RGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 200 ~-~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
+ .....-.. ....-.+++.. ++.+++.|+.++ .+..|++
T Consensus 129 ~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~~~~~dg-----~v~vwd~ 170 (814)
T 3mkq_A 129 NWALEQTFEG-HEHFVMCVAFNPKDPSTFASGCLDR-----TVKVWSL 170 (814)
T ss_dssp TSEEEEEEEC-CSSCEEEEEEETTEEEEEEEEETTS-----EEEEEET
T ss_pred CceEEEEEcC-CCCcEEEEEEEcCCCCEEEEEeCCC-----eEEEEEC
Confidence 5 22221110 11111122222 456777777653 3556653
No 120
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=94.69 E-value=0.28 Score=44.73 Aligned_cols=104 Identities=5% Similarity=-0.067 Sum_probs=52.9
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCc--eeeCCCCCCCCccceeeEEE-----eCCEEEEEeCeeCCCCCCCCceeE
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREMAHSHLGMVT-----DGRYIYVVTGQYGPQCRGPTAHTF 193 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~r~~~~~~~-----~~~~lyv~GG~~~~~~~~~~~~~~ 193 (429)
++..++.|+.++ .+.+||..+.+ ...+........+.-.+++. .++.+++.|+. ...+.
T Consensus 128 ~~~~l~~~~~d~------~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~--------d~~i~ 193 (357)
T 3i2n_A 128 GAPEIVTGSRDG------TVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYD--------NGDIK 193 (357)
T ss_dssp CCCEEEEEETTS------CEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEET--------TSEEE
T ss_pred CccEEEEEeCCC------eEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEcc--------CCeEE
Confidence 455677776543 37889988765 22332222211122233331 35666666653 34788
Q ss_pred EEeCCCCceEeCCCCCCCCCCceEEEE----CCEEEEEeCCCCCCCCccccceEee
Q 014195 194 VLDTETKKWQDLPPLPVPRYAPATQLW----RGRLHVMGGSGENRYTPEVDHWSLA 245 (429)
Q Consensus 194 ~yd~~t~~W~~~~~~p~~r~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~~~~~ 245 (429)
.||..+.+-....... ..-.++... ++..++.|+.++ .+..|++.
T Consensus 194 i~d~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~ 242 (357)
T 3i2n_A 194 LFDLRNMALRWETNIK--NGVCSLEFDRKDISMNKLVATSLEG-----KFHVFDMR 242 (357)
T ss_dssp EEETTTTEEEEEEECS--SCEEEEEESCSSSSCCEEEEEESTT-----EEEEEEEE
T ss_pred EEECccCceeeecCCC--CceEEEEcCCCCCCCCEEEEECCCC-----eEEEEeCc
Confidence 8998887643322111 111222222 566777776543 45667653
No 121
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=94.64 E-value=1.6 Score=41.65 Aligned_cols=41 Identities=7% Similarity=0.020 Sum_probs=23.5
Q ss_pred cEEEEec--C-CCCeEEecccCcceeeeeeEEECCEEEEEcccC
Q 014195 364 EIFQFNL--N-TLKWHVIGKLPYRVKTTLAGYWNGWLYFTSGQR 404 (429)
Q Consensus 364 ~i~~yd~--~-~~~W~~v~~lp~~r~~~~~~~~~~~i~v~GG~~ 404 (429)
.|.+||. . ...+..+..++....-.++....+.+++..+..
T Consensus 331 ~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~~~~ 374 (450)
T 2vdu_B 331 CIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTLDNK 374 (450)
T ss_dssp EEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEECCT
T ss_pred eEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEEecc
Confidence 6778887 3 345666655544333344455567777776543
No 122
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=94.63 E-value=0.63 Score=46.05 Aligned_cols=280 Identities=9% Similarity=0.003 Sum_probs=124.7
Q ss_pred cceeeeecCCCcccceeeeeeecCCCCe--EEecCCCCCCCcceeeeecC---CCCcCcccccccccccc--cCCCeEEc
Q 014195 33 ADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTKK---DVVPKRILPATFQDLPA--PELKWEKM 105 (429)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~yd~~~~~--~~~p~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~~~d~--~~~~W~~~ 105 (429)
++.+|+.+..++ .+..||..+.+ ..++.... .+++...... +..+. ...+..+|. .+. +.+
T Consensus 148 ~~~~~vs~~~d~-----~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~---d~~V~v~D~~~~t~--~~~ 215 (543)
T 1nir_A 148 PNLFSVTLRDAG-----QIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGR---DARIDMIDLWAKEP--TKV 215 (543)
T ss_dssp GGEEEEEEGGGT-----EEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEET---TSEEEEEETTSSSC--EEE
T ss_pred CCEEEEEEcCCC-----eEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECC---CCeEEEEECcCCCC--cEE
Confidence 678888876544 67788998887 34442111 1222222121 11111 256777777 443 233
Q ss_pred cCCCCCccCCcEEEE-----CC-EEEEEeccCCCCceeeeEEEEECCCCceeeCCCCC---------CCCccceeeEEEe
Q 014195 106 KAAPVPRLDGAAIQI-----KN-LLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMP---------REMAHSHLGMVTD 170 (429)
Q Consensus 106 ~~~p~~R~~~~~~~~-----~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~---------~~~~r~~~~~~~~ 170 (429)
..++....-..++.. ++ .+|+..-. ...+.++|..+.+-...-+.. .+.+|....+...
T Consensus 216 ~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~------~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~ 289 (543)
T 1nir_A 216 AEIKIGIEARSVESSKFKGYEDRYTIAGAYW------PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASH 289 (543)
T ss_dssp EEEECCSEEEEEEECCSTTCTTTEEEEEEEE------SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECS
T ss_pred EEEecCCCcceEEeCCCcCCCCCEEEEEEcc------CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECC
Confidence 333322211223332 34 55554322 234778898876543221110 0112322222222
Q ss_pred -CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEEE-CCE-EEEEeCCCCCCCCccccceEeeee
Q 014195 171 -GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW-RGR-LHVMGGSGENRYTPEVDHWSLAVK 247 (429)
Q Consensus 171 -~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~~~~~~~~~~ 247 (429)
+..+|+.... ...++.+|..+.+-..+..++..+.-+.++.- +++ +|+.+..+ ..+.+|+
T Consensus 290 ~~~~~~vs~~~--------~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~-----~~v~v~D---- 352 (543)
T 1nir_A 290 EHPEFIVNVKE--------TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNS-----NKVAVID---- 352 (543)
T ss_dssp SSSEEEEEETT--------TTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGG-----TEEEEEE----
T ss_pred CCCEEEEEECC--------CCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCC-----CeEEEEE----
Confidence 4555554321 46788898877542221122223333333332 444 55543322 2344555
Q ss_pred cCCccccceee---ccCCCCCCCceeEEEe-CCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeCCCC----Ce
Q 014195 248 DGKPLEKEWRT---EIPIPRGGPHRACVVV-DDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLDDEM----KW 319 (429)
Q Consensus 248 ~~d~~~~~W~~---~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~----~W 319 (429)
..+.+-.. ....|....+...+.- ++.+|+.+..... .-.++..+..+ .|
T Consensus 353 ---~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~-------------------~V~v~d~~~~~~~~~~~ 410 (543)
T 1nir_A 353 ---SKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDG-------------------SISLIGTDPKNHPQYAW 410 (543)
T ss_dssp ---TTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSS-------------------EEEEEECCTTTCTTTBT
T ss_pred ---CCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCc-------------------eEEEEEeCCCCCchhcC
Confidence 33433222 2233444332232222 3678887653211 01244443211 28
Q ss_pred EEcCCCCCCCCCcceeEEEECCEEEEEccc-CCCCCCccceeeeCcEEEEecCCCCe
Q 014195 320 KVLPSMPKPDSHIEFAWVLVNNSIVIVGGT-TEKHPTTKKMVLVGEIFQFNLNTLKW 375 (429)
Q Consensus 320 ~~~~~~~~~r~~~~~~~~~~~~~i~v~GG~-~~~~~~~~~~~~~~~i~~yd~~~~~W 375 (429)
+.+..++.......+.....+++.+.++.. +.+.. ..+.|.+||.++.+-
T Consensus 411 ~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~------~~~~v~v~d~~~~~~ 461 (543)
T 1nir_A 411 KKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDAR------ISQSVAVFDLKNLDA 461 (543)
T ss_dssp SEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHH------HHTCEEEEETTCTTS
T ss_pred eEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcc------cCceEEEEECCCCCC
Confidence 877765543322111113344444444432 21100 234899999988763
No 123
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=94.60 E-value=0.72 Score=43.54 Aligned_cols=100 Identities=8% Similarity=0.061 Sum_probs=51.2
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 199 (429)
++.+++.|+.++ .+.+||..+.+....-.... ..-.+++.. ++.+++.|+.++ .+..||..+
T Consensus 119 ~~~~l~s~s~Dg------~i~vwd~~~~~~~~~l~~h~---~~V~~v~~~~~~~~l~sgs~D~--------~i~iwd~~~ 181 (410)
T 1vyh_C 119 VFSVMVSASEDA------TIKVWDYETGDFERTLKGHT---DSVQDISFDHSGKLLASCSADM--------TIKLWDFQG 181 (410)
T ss_dssp SSSEEEEEESSS------CEEEEETTTCCCCEEECCCS---SCEEEEEECTTSSEEEEEETTS--------CCCEEETTS
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEEEeccC---CcEEEEEEcCCCCEEEEEeCCC--------eEEEEeCCC
Confidence 456777777654 37889988876543211111 112233332 566777777543 455677766
Q ss_pred CceEeCCCCCCCCCCceEEEE--CCEEEEEeCCCCCCCCccccceEe
Q 014195 200 KKWQDLPPLPVPRYAPATQLW--RGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 200 ~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
.+-.. .+......-..+.+ ++..++.|+.+ ..+..|++
T Consensus 182 ~~~~~--~~~~h~~~V~~v~~~p~~~~l~s~s~D-----~~i~~wd~ 221 (410)
T 1vyh_C 182 FECIR--TMHGHDHNVSSVSIMPNGDHIVSASRD-----KTIKMWEV 221 (410)
T ss_dssp SCEEE--CCCCCSSCEEEEEECSSSSEEEEEETT-----SEEEEEET
T ss_pred CceeE--EEcCCCCCEEEEEEeCCCCEEEEEeCC-----CeEEEEEC
Confidence 54322 22211111222222 56667777755 34666663
No 124
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=94.57 E-value=0.54 Score=46.62 Aligned_cols=53 Identities=9% Similarity=-0.086 Sum_probs=28.2
Q ss_pred CCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEEecccC---cceeeeeeEEECCEEEEEcccC
Q 014195 340 NNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIGKLP---YRVKTTLAGYWNGWLYFTSGQR 404 (429)
Q Consensus 340 ~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v~~lp---~~r~~~~~~~~~~~i~v~GG~~ 404 (429)
++..++.++.++ .+.+||..+.+-...-..+ .......+...++..++.|+.+
T Consensus 263 ~~~~l~~~~~d~------------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 318 (615)
T 1pgu_A 263 DSQKFATVGADA------------TIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLD 318 (615)
T ss_dssp SSSEEEEEETTS------------EEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETT
T ss_pred CCCEEEEEcCCC------------cEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECC
Confidence 777788877542 6888998876543322222 1111222222355566666543
No 125
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=94.56 E-value=0.55 Score=43.64 Aligned_cols=63 Identities=14% Similarity=0.126 Sum_probs=33.0
Q ss_pred EEEEEeccCCCCceeeeEEEEECCCCc------eeeCCCCCCCC-ccceeeEEEe-----CCEE-EEEeCeeCCCCCCCC
Q 014195 123 LLYVFAGYGSIDYVHSHVDIYNFTDNT------WGGRFDMPREM-AHSHLGMVTD-----GRYI-YVVTGQYGPQCRGPT 189 (429)
Q Consensus 123 ~iyv~GG~~~~~~~~~~~~~yd~~~~~------W~~~~~~~~~~-~r~~~~~~~~-----~~~l-yv~GG~~~~~~~~~~ 189 (429)
.+++.|+.++ .+.+||..+.+ +..+...+... ...-.+++.. ++.. ++.|+.+
T Consensus 82 ~~l~s~~~dg------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-------- 147 (397)
T 1sq9_A 82 CLVATTSFSG------DLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-------- 147 (397)
T ss_dssp EEEEEEETTS------CEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT--------
T ss_pred cEEEEEcCCC------CEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC--------
Confidence 7778877653 37778877776 66554432100 0112233333 3445 6666643
Q ss_pred ceeEEEeCCC
Q 014195 190 AHTFVLDTET 199 (429)
Q Consensus 190 ~~~~~yd~~t 199 (429)
..+..||..+
T Consensus 148 g~i~iwd~~~ 157 (397)
T 1sq9_A 148 GTTYIWKFHP 157 (397)
T ss_dssp SCEEEEEEES
T ss_pred CcEEEEeCCc
Confidence 3566677665
No 126
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=94.47 E-value=0.36 Score=44.87 Aligned_cols=61 Identities=3% Similarity=-0.113 Sum_probs=32.8
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCE-EEEEeCeeCCCCCCCCceeEEEeCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRY-IYVVTGQYGPQCRGPTAHTFVLDTE 198 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~~~~~~~yd~~ 198 (429)
++.+++.|+.++ .+.+||.....-..+.... ..-.+++.. ++. +++.|+. ...+..||..
T Consensus 174 ~~~~l~~~~~d~------~i~i~d~~~~~~~~~~~h~----~~v~~~~~~~~~~~~l~s~~~--------d~~i~iwd~~ 235 (383)
T 3ei3_B 174 SRQMLATGDSTG------RLLLLGLDGHEIFKEKLHK----AKVTHAEFNPRCDWLMATSSV--------DATVKLWDLR 235 (383)
T ss_dssp TTTEEEEEETTS------EEEEEETTSCEEEEEECSS----SCEEEEEECSSCTTEEEEEET--------TSEEEEEEGG
T ss_pred CCCEEEEECCCC------CEEEEECCCCEEEEeccCC----CcEEEEEECCCCCCEEEEEeC--------CCEEEEEeCC
Confidence 456677776543 4888998544333332211 112233333 333 6777664 3467788887
Q ss_pred C
Q 014195 199 T 199 (429)
Q Consensus 199 t 199 (429)
+
T Consensus 236 ~ 236 (383)
T 3ei3_B 236 N 236 (383)
T ss_dssp G
T ss_pred C
Confidence 6
No 127
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=94.44 E-value=1.2 Score=45.49 Aligned_cols=68 Identities=7% Similarity=0.034 Sum_probs=38.6
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCC---ceeeCCCCCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCCceeEEEeC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDN---TWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~---~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~ 197 (429)
+++.++++.. ..++++|..++ +-..+..... ........-+++.++++. ...++.+|.
T Consensus 119 Dg~~l~~~~~-------~~i~~~d~~~~~~~~~~~l~~~~~---~~~~~~~SPDG~~la~~~---------~~~i~~~d~ 179 (741)
T 2ecf_A 119 DAQRLLFPLG-------GELYLYDLKQEGKAAVRQLTHGEG---FATDAKLSPKGGFVSFIR---------GRNLWVIDL 179 (741)
T ss_dssp TSSEEEEEET-------TEEEEEESSSCSTTSCCBCCCSSS---CEEEEEECTTSSEEEEEE---------TTEEEEEET
T ss_pred CCCEEEEEeC-------CcEEEEECCCCCcceEEEcccCCc---ccccccCCCCCCEEEEEe---------CCcEEEEec
Confidence 5555555543 46999999887 5555433322 111112222454444432 237999999
Q ss_pred CCCceEeCCC
Q 014195 198 ETKKWQDLPP 207 (429)
Q Consensus 198 ~t~~W~~~~~ 207 (429)
.+.+...+..
T Consensus 180 ~~g~~~~~~~ 189 (741)
T 2ecf_A 180 ASGRQMQLTA 189 (741)
T ss_dssp TTTEEEECCC
T ss_pred CCCCEEEecc
Confidence 9988777653
No 128
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.43 E-value=3.1 Score=38.53 Aligned_cols=57 Identities=11% Similarity=0.117 Sum_probs=32.2
Q ss_pred EEECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeE-EecccCcce---eeeeeEEECCEEEEEcccCC
Q 014195 337 VLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWH-VIGKLPYRV---KTTLAGYWNGWLYFTSGQRD 405 (429)
Q Consensus 337 ~~~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~-~v~~lp~~r---~~~~~~~~~~~i~v~GG~~~ 405 (429)
...++++++.|+.++ .|.+||..+.+-. .+..+.... ....+...+++.++.|+.+.
T Consensus 306 ~s~~g~~l~~g~~dg------------~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~ 366 (380)
T 3iz6_a 306 FSISGRLLFAGYSNG------------DCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDK 366 (380)
T ss_dssp ECSSSSEEEEECTTS------------CEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTS
T ss_pred ECCCCCEEEEEECCC------------CEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCC
Confidence 345677777776542 6888998776543 233322221 12222334677888887653
No 129
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=94.42 E-value=1.7 Score=43.68 Aligned_cols=241 Identities=10% Similarity=-0.047 Sum_probs=114.3
Q ss_pred ccccccccc--C-CCeEEccCCCC----CccCCcEEEECCEEEEEeccCC----CCceeeeEEEEECCC------Cceee
Q 014195 90 ATFQDLPAP--E-LKWEKMKAAPV----PRLDGAAIQIKNLLYVFAGYGS----IDYVHSHVDIYNFTD------NTWGG 152 (429)
Q Consensus 90 ~~~~~~d~~--~-~~W~~~~~~p~----~R~~~~~~~~~~~iyv~GG~~~----~~~~~~~~~~yd~~~------~~W~~ 152 (429)
..++.++.. . ..-.++...+. .+....+..-+++.+++...+. ......+++++|..+ .+-+.
T Consensus 102 ~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 181 (662)
T 3azo_A 102 QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRE 181 (662)
T ss_dssp CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEE
T ss_pred CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeE
Confidence 345566654 3 45555555431 1111122223555444444331 112235799999988 66666
Q ss_pred CC-CCCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCCceeEEEeCC-CC---ceEeCCCCCCCCCCceEE-EECCEEEE
Q 014195 153 RF-DMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTE-TK---KWQDLPPLPVPRYAPATQ-LWRGRLHV 226 (429)
Q Consensus 153 ~~-~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~-t~---~W~~~~~~p~~r~~~~~~-~~~~~lyv 226 (429)
+. .-.. .-...+ ..-+++.+++...+.....-...+++.+|.. +. +...+..-. .......+ .-++++|+
T Consensus 182 l~~~~~~--~~~~~~-~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~-~~~~~~~~~spdg~l~~ 257 (662)
T 3azo_A 182 LSDDAHR--FVTGPR-LSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP-EEAIAQAEWAPDGSLIV 257 (662)
T ss_dssp SSCSCSS--EECCCE-ECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET-TBCEEEEEECTTSCEEE
T ss_pred EEecCCC--cccCce-ECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC-CceEcceEECCCCeEEE
Confidence 64 3221 111111 2224444444443332111113689999998 56 343332111 11111222 22677777
Q ss_pred EeCCCCCCCCccccceEeeeecCCccccceeeccCCCCCCC-------ceeEEEe-CCEEEEEcccCCCCCCCCCCCccc
Q 014195 227 MGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGP-------HRACVVV-DDRLLVIGGQEGDFMAKPGSPIFK 298 (429)
Q Consensus 227 ~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~-------~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~ 298 (429)
.+..++ ....|.+ |..+.+++.+.+...... ....+.. ++++++.+.. +.
T Consensus 258 ~~~~~~-----~~~l~~~-----~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~----------- 315 (662)
T 3azo_A 258 ATDRTG-----WWNLHRV-----DPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GA----------- 315 (662)
T ss_dssp EECTTS-----SCEEEEE-----CTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SS-----------
T ss_pred EECCCC-----CeEEEEE-----ECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-Cc-----------
Confidence 765442 1233433 355666666543221110 0123333 6777776654 22
Q ss_pred cccCCeeeeCceEEeC-CCCCeEEcCCCCCCCCCcceeE-EEECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeE
Q 014195 299 CSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAW-VLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWH 376 (429)
Q Consensus 299 ~~~~~~~~~~~v~~~d-~~~~W~~~~~~~~~r~~~~~~~-~~~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~ 376 (429)
..+|.+| .+...+.+... .... ..+ ...++.+++..+.... ..++|.+|+++.+.+
T Consensus 316 ---------~~l~~~d~~~~~~~~l~~~---~~~~-~~~~s~~~~~~~~~~~~~~~---------~~~i~~~d~~~g~~~ 373 (662)
T 3azo_A 316 ---------AVLGILDPESGELVDAAGP---WTEW-AATLTVSGTRAVGVAASPRT---------AYEVVELDTVTGRAR 373 (662)
T ss_dssp ---------CEEEEEETTTTEEEECCSS---CCEE-EEEEEEETTEEEEEEEETTE---------EEEEEEEETTTCCEE
T ss_pred ---------cEEEEEECCCCcEEEecCC---CCeE-EEEEecCCCEEEEEEcCCCC---------CCEEEEEECCCCceE
Confidence 2478777 66666665432 1111 122 3345666666544322 237899999888877
Q ss_pred Ee
Q 014195 377 VI 378 (429)
Q Consensus 377 ~v 378 (429)
.+
T Consensus 374 ~l 375 (662)
T 3azo_A 374 TI 375 (662)
T ss_dssp EE
T ss_pred Ee
Confidence 66
No 130
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=94.40 E-value=1.1 Score=41.24 Aligned_cols=100 Identities=11% Similarity=0.098 Sum_probs=50.2
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe---CCEEEEEeCeeCCCCCCCCceeEEEeC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD---GRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~yd~ 197 (429)
++..++.|+.++ .+.+||+.+.+-...-.... .. -.++... ++.+++.|+.+ ..+..||.
T Consensus 165 ~~~~l~t~s~D~------~v~lwd~~~~~~~~~~~~h~--~~-v~~~~~~~~~~g~~l~sgs~D--------g~v~~wd~ 227 (354)
T 2pbi_B 165 SDMQILTASGDG------TCALWDVESGQLLQSFHGHG--AD-VLCLDLAPSETGNTFVSGGCD--------KKAMVWDM 227 (354)
T ss_dssp SSSEEEEEETTS------EEEEEETTTCCEEEEEECCS--SC-EEEEEECCCSSCCEEEEEETT--------SCEEEEET
T ss_pred CCCEEEEEeCCC------cEEEEeCCCCeEEEEEcCCC--CC-eEEEEEEeCCCCCEEEEEeCC--------CeEEEEEC
Confidence 344555565432 47889998876433211111 11 1122221 34677777653 36778898
Q ss_pred CCCceEeCCCCCCCCCCceEEEE--CCEEEEEeCCCCCCCCccccceEe
Q 014195 198 ETKKWQDLPPLPVPRYAPATQLW--RGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 198 ~t~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
.+.+....-... ...-..+.+ ++.+++.|+.++ .+..|++
T Consensus 228 ~~~~~~~~~~~h--~~~v~~v~~~p~~~~l~s~s~D~-----~v~lwd~ 269 (354)
T 2pbi_B 228 RSGQCVQAFETH--ESDVNSVRYYPSGDAFASGSDDA-----TCRLYDL 269 (354)
T ss_dssp TTCCEEEEECCC--SSCEEEEEECTTSSEEEEEETTS-----CEEEEET
T ss_pred CCCcEEEEecCC--CCCeEEEEEeCCCCEEEEEeCCC-----eEEEEEC
Confidence 877644321111 111122222 567777777653 4666763
No 131
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=94.39 E-value=1.3 Score=39.80 Aligned_cols=50 Identities=20% Similarity=0.200 Sum_probs=26.0
Q ss_pred eEEEEECC--CCceeeCCCCCCCCccceeeEEEe--CCEEEEEeCeeCCCCCCCCceeEEEeCC
Q 014195 139 HVDIYNFT--DNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (429)
Q Consensus 139 ~~~~yd~~--~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~ 198 (429)
.+.+|+.. +++++.+..++.+. .-..+++. +..||+.+.. ...+..||..
T Consensus 61 ~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~--------~~~i~~~d~~ 114 (343)
T 1ri6_A 61 RVLAYRIAPDDGALTFAAESALPG--SLTHISTDHQGQFVFVGSYN--------AGNVSVTRLE 114 (343)
T ss_dssp EEEEEEECTTTCCEEEEEEEECSS--CCSEEEECTTSSEEEEEETT--------TTEEEEEEEE
T ss_pred eEEEEEecCCCCceeeccccccCC--CCcEEEEcCCCCEEEEEecC--------CCeEEEEECC
Confidence 36666665 77877654443321 11223332 4456666431 2457778773
No 132
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=94.36 E-value=0.96 Score=41.52 Aligned_cols=98 Identities=15% Similarity=0.090 Sum_probs=47.4
Q ss_pred EEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEE--eCCEEEEEeCeeCCCCCCCCceeEEEeCCCCc
Q 014195 124 LYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT--DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKK 201 (429)
Q Consensus 124 iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~ 201 (429)
.+.+|.+.......-.++.+|+.+.+++.+..... .. -..+++ .+..||+......... .-.+|.+|..+.+
T Consensus 15 ~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~--~~-p~~l~~spdg~~l~~~~~~~~~~~---~v~~~~~~~~~g~ 88 (361)
T 3scy_A 15 TMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEV--AN-PSYLIPSADGKFVYSVNEFSKDQA---AVSAFAFDKEKGT 88 (361)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEEC--SC-CCSEEECTTSSEEEEEECCSSTTC---EEEEEEEETTTTE
T ss_pred EEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccC--CC-CceEEECCCCCEEEEEEccCCCCC---cEEEEEEeCCCCc
Confidence 44567665433222246777888888877654311 11 122233 2446777654211110 2234556666677
Q ss_pred eEeCCCCCCCCCC-ceEEEECCE-EEEEe
Q 014195 202 WQDLPPLPVPRYA-PATQLWRGR-LHVMG 228 (429)
Q Consensus 202 W~~~~~~p~~r~~-~~~~~~~~~-lyv~G 228 (429)
.+.+...+..... ..++. +++ ||+..
T Consensus 89 ~~~~~~~~~~~~~p~~~~~-dg~~l~~~~ 116 (361)
T 3scy_A 89 LHLLNTQKTMGADPCYLTT-NGKNIVTAN 116 (361)
T ss_dssp EEEEEEEECSSSCEEEEEE-CSSEEEEEE
T ss_pred EEEeeEeccCCCCcEEEEE-CCCEEEEEE
Confidence 7766544322222 22333 554 66554
No 133
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=94.35 E-value=0.25 Score=46.45 Aligned_cols=103 Identities=10% Similarity=-0.054 Sum_probs=52.2
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceee-----CCCCCCCCccceeeEEEe-CC-EEEEEeCeeCCCCCCCCceeE
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGG-----RFDMPREMAHSHLGMVTD-GR-YIYVVTGQYGPQCRGPTAHTF 193 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-----~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~ 193 (429)
++.+++.|+.++ .+.+||..++.... +..+... ...-.+++.. ++ .+++.|+.+ ..+.
T Consensus 93 ~~~~l~s~s~dg------~v~vw~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~p~~~~~l~s~~~d--------g~i~ 157 (402)
T 2aq5_A 93 NDNVIASGSEDC------TVMVWEIPDGGLVLPLREPVITLEGH-TKRVGIVAWHPTAQNVLLSAGCD--------NVIL 157 (402)
T ss_dssp CTTEEEEEETTS------EEEEEECCTTCCSSCBCSCSEEEECC-SSCEEEEEECSSBTTEEEEEETT--------SCEE
T ss_pred CCCEEEEEeCCC------eEEEEEccCCCCccccCCceEEecCC-CCeEEEEEECcCCCCEEEEEcCC--------CEEE
Confidence 456777777553 48889988875421 1111110 1112233333 32 477777643 4678
Q ss_pred EEeCCCCceEeCCC-CCCCCCCceEEEE-CCEEEEEeCCCCCCCCccccceE
Q 014195 194 VLDTETKKWQDLPP-LPVPRYAPATQLW-RGRLHVMGGSGENRYTPEVDHWS 243 (429)
Q Consensus 194 ~yd~~t~~W~~~~~-~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~ 243 (429)
.||..+.+....-. ......-.+++.. ++++++.|+.+ ..+..|+
T Consensus 158 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd 204 (402)
T 2aq5_A 158 VWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-----KRVRVIE 204 (402)
T ss_dssp EEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-----SEEEEEE
T ss_pred EEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC-----CcEEEEe
Confidence 89988876543211 1111111122222 56677777654 3456665
No 134
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.32 E-value=3.3 Score=38.36 Aligned_cols=102 Identities=7% Similarity=0.048 Sum_probs=49.3
Q ss_pred CEEEEEeccCCCCceeeeEEEEECCCCceeeCCC--CCCCCccceeeEEE--eCCEEEEEeCeeCCCCCCCCceeEEEeC
Q 014195 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFD--MPREMAHSHLGMVT--DGRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (429)
Q Consensus 122 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~--~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~ 197 (429)
+..++.|+.++ .+.+||..+.+-...-. .+......-.++.. .++.+++.|+.+ ..+..||+
T Consensus 170 ~~~l~s~s~D~------~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D--------~~v~~wd~ 235 (380)
T 3iz6_a 170 ETRLITGSGDQ------TCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD--------TTVRLWDL 235 (380)
T ss_dssp SSCEEEECTTS------CEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETT--------SCEEEEET
T ss_pred CCEEEEECCCC------cEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECC--------CeEEEEEC
Confidence 34456666543 37889998876543221 11110111222333 256788888753 35667887
Q ss_pred CCC--ceEeCCCCCCCCCCceEEE-ECCEEEEEeCCCCCCCCccccceEe
Q 014195 198 ETK--KWQDLPPLPVPRYAPATQL-WRGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 198 ~t~--~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
... .-..+..-. . .-.+++. -+++.++.|+.++ .+..|++
T Consensus 236 ~~~~~~~~~~~~h~-~-~v~~v~~~p~~~~l~s~s~D~-----~i~lwd~ 278 (380)
T 3iz6_a 236 RITSRAVRTYHGHE-G-DINSVKFFPDGQRFGTGSDDG-----TCRLFDM 278 (380)
T ss_dssp TTTCCCCEEECCCS-S-CCCEEEECTTSSEEEEECSSS-----CEEEEET
T ss_pred CCCCcceEEECCcC-C-CeEEEEEecCCCeEEEEcCCC-----eEEEEEC
Confidence 532 111111100 0 1112222 2567778887653 4666763
No 135
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=94.30 E-value=0.97 Score=42.30 Aligned_cols=99 Identities=8% Similarity=0.034 Sum_probs=52.1
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 199 (429)
+++.++.|+.++ .+.+||..+.+-...-.... ..-.+++.. ++..++.|+. ...+..||..+
T Consensus 134 dg~~l~s~~~d~------~i~iwd~~~~~~~~~~~~h~---~~v~~~~~~p~~~~l~s~s~--------d~~v~iwd~~~ 196 (393)
T 1erj_A 134 DGKFLATGAEDR------LIRIWDIENRKIVMILQGHE---QDIYSLDYFPSGDKLVSGSG--------DRTVRIWDLRT 196 (393)
T ss_dssp TSSEEEEEETTS------CEEEEETTTTEEEEEECCCS---SCEEEEEECTTSSEEEEEET--------TSEEEEEETTT
T ss_pred CCCEEEEEcCCC------eEEEEECCCCcEEEEEccCC---CCEEEEEEcCCCCEEEEecC--------CCcEEEEECCC
Confidence 566777777653 47889988776443211111 112233333 4445556653 34677889888
Q ss_pred CceEeCCCCCCCCCCceEEEE--CCEEEEEeCCCCCCCCccccceE
Q 014195 200 KKWQDLPPLPVPRYAPATQLW--RGRLHVMGGSGENRYTPEVDHWS 243 (429)
Q Consensus 200 ~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~ 243 (429)
.+....-... ..-.+++.. ++++++.|+.++ .+..|+
T Consensus 197 ~~~~~~~~~~--~~v~~~~~~~~~~~~l~~~s~d~-----~v~iwd 235 (393)
T 1erj_A 197 GQCSLTLSIE--DGVTTVAVSPGDGKYIAAGSLDR-----AVRVWD 235 (393)
T ss_dssp TEEEEEEECS--SCEEEEEECSTTCCEEEEEETTS-----CEEEEE
T ss_pred CeeEEEEEcC--CCcEEEEEECCCCCEEEEEcCCC-----cEEEEE
Confidence 7644322111 111122222 567888887653 456665
No 136
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=94.23 E-value=4.8 Score=39.93 Aligned_cols=79 Identities=9% Similarity=0.069 Sum_probs=45.3
Q ss_pred cEEEECCEEEEEeccCCCCceeeeEEEEECCCCc--eeeC-CCCCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCCcee
Q 014195 116 AAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGR-FDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHT 192 (429)
Q Consensus 116 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~ 192 (429)
+.++.+++||+... ...+.++|..+.+ |+.- ...+.. .....+.++.++.||+....... .....+
T Consensus 110 ~~~~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~~~~~-~~~~~~P~v~~g~v~vg~~~~~~---~~~g~v 178 (571)
T 2ad6_A 110 GLAYGAGQIVKKQA-------NGHLLALDAKTGKINWEVEVCDPKVG-STLTQAPFVAKDTVLMGCSGAEL---GVRGAV 178 (571)
T ss_dssp CCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCCGGGT-CBCCSCCEEETTEEEEECBCGGG---TCCCEE
T ss_pred ccEEECCEEEEEeC-------CCEEEEEECCCCCEEEEecCCCCCcc-ceeccCCEEECCEEEEEecCCcc---CCCCEE
Confidence 34566889988643 1358999998874 8753 221110 01122334568888875432111 113578
Q ss_pred EEEeCCCCc--eEeC
Q 014195 193 FVLDTETKK--WQDL 205 (429)
Q Consensus 193 ~~yd~~t~~--W~~~ 205 (429)
+.||++|.+ |+.-
T Consensus 179 ~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 179 NAFDLKTGELKWRAF 193 (571)
T ss_dssp EEEETTTCCEEEEEE
T ss_pred EEEECCCCcEEEEEc
Confidence 999998764 8653
No 137
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=94.17 E-value=0.39 Score=43.86 Aligned_cols=101 Identities=10% Similarity=0.065 Sum_probs=51.9
Q ss_pred CEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe--CCEEEEEeCeeCCCCCCCCceeEEEeCCC
Q 014195 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (429)
Q Consensus 122 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 199 (429)
+.+++.|+.++ .+.+||..+.+-... +... ...-.+++.. ++.+++.|+. ...+..||..+
T Consensus 85 ~~~l~~~~~dg------~i~v~d~~~~~~~~~--~~~~-~~~i~~~~~~~~~~~~l~s~~~--------dg~i~iwd~~~ 147 (366)
T 3k26_A 85 HPLLAVAGSRG------IIRIINPITMQCIKH--YVGH-GNAINELKFHPRDPNLLLSVSK--------DHALRLWNIQT 147 (366)
T ss_dssp CEEEEEEETTC------EEEEECTTTCCEEEE--EESC-CSCEEEEEECSSCTTEEEEEET--------TSCEEEEETTT
T ss_pred CCEEEEecCCC------EEEEEEchhceEeee--ecCC-CCcEEEEEECCCCCCEEEEEeC--------CCeEEEEEeec
Confidence 56778787653 488899887654321 1110 1112233333 5567777764 34678889887
Q ss_pred CceEeC-CCCCCCCCCceEEEE--CCEEEEEeCCCCCCCCccccceEe
Q 014195 200 KKWQDL-PPLPVPRYAPATQLW--RGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 200 ~~W~~~-~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
.+-... ..+......-..+.+ +++.++.|+.++ .+..|++
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~i~d~ 190 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDH-----SLKLWRI 190 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTS-----CEEEEES
T ss_pred CeEEEEecccccccCceeEEEECCCCCEEEEecCCC-----CEEEEEC
Confidence 654432 111211222222222 456677776553 3555553
No 138
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.11 E-value=5.2 Score=41.28 Aligned_cols=198 Identities=11% Similarity=0.011 Sum_probs=98.4
Q ss_pred EEEEECCCCceeeCCCCCCCCc-cceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCC-CCCce
Q 014195 140 VDIYNFTDNTWGGRFDMPREMA-HSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVP-RYAPA 216 (429)
Q Consensus 140 ~~~yd~~~~~W~~~~~~~~~~~-r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~-r~~~~ 216 (429)
+.+||+.+++++.... +...+ ..-.+++.. ++.||+- .. ...+++||+.+++++.......+ ..-.+
T Consensus 385 l~~~~~~~~~~~~~~~-~~~~~~~~v~~i~~d~~g~lWig-t~--------~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~ 454 (781)
T 3v9f_A 385 INVFENGKRVAIYNKE-NRELLSNSVLCSLKDSEGNLWFG-TY--------LGNISYYNTRLKKFQIIELEKNELLDVRV 454 (781)
T ss_dssp EEEEETTEEEEECC------CCCSBEEEEEECTTSCEEEE-ET--------TEEEEEECSSSCEEEECCSTTTCCCCEEE
T ss_pred EEEEECCCCeEEEccC-CCCCCCcceEEEEECCCCCEEEE-ec--------cCCEEEEcCCCCcEEEeccCCCCCCeEEE
Confidence 7789998887776521 11111 222344443 6778873 21 24688999999999887532111 11122
Q ss_pred EEEE-CCEEEEEeCCCCCCCCccccceEeeeecCCccccceeeccCCC-----CCCCceeEEE-eCCEEEEEcccCCCCC
Q 014195 217 TQLW-RGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIP-----RGGPHRACVV-VDDRLLVIGGQEGDFM 289 (429)
Q Consensus 217 ~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p-----~~~~~~~~~~-~~~~iyv~GG~~~~~~ 289 (429)
++.- ++.|++-.. . ...+| |+.+.+|+.....+ .... .+++. .++.|++..-..
T Consensus 455 i~~d~~g~lwigt~-~------Gl~~~-------~~~~~~~~~~~~~~~~~~~~~~i-~~i~~d~~g~lWigt~~~---- 515 (781)
T 3v9f_A 455 FYEDKNKKIWIGTH-A------GVFVI-------DLASKKVIHHYDTSNSQLLENFV-RSIAQDSEGRFWIGTFGG---- 515 (781)
T ss_dssp EEECTTSEEEEEET-T------EEEEE-------ESSSSSCCEEECTTTSSCSCSCE-EEEEECTTCCEEEEESSS----
T ss_pred EEECCCCCEEEEEC-C------ceEEE-------eCCCCeEEecccCccccccccee-EEEEEcCCCCEEEEEcCC----
Confidence 2222 567777532 1 12222 25566665533221 1111 12222 256677743211
Q ss_pred CCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCCC-CCCCCCcceeEEE-ECCEEEEEcccCCCCCCccceeeeCcE-
Q 014195 290 AKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSM-PKPDSHIEFAWVL-VNNSIVIVGGTTEKHPTTKKMVLVGEI- 365 (429)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~-~~~r~~~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~i- 365 (429)
-+++|| .+.+++..... ..+.... .+++. .++.|++... . -+
T Consensus 516 -------------------Gl~~~~~~~~~~~~~~~~~~l~~~~i-~~i~~d~~g~lWi~T~-~-------------Glv 561 (781)
T 3v9f_A 516 -------------------GVGIYTPDMQLVRKFNQYEGFCSNTI-NQIYRSSKGQMWLATG-E-------------GLV 561 (781)
T ss_dssp -------------------CEEEECTTCCEEEEECTTTTCSCSCE-EEEEECTTSCEEEEET-T-------------EEE
T ss_pred -------------------CEEEEeCCCCeEEEccCCCCCCCCee-EEEEECCCCCEEEEEC-C-------------Cce
Confidence 178888 67777776531 1111111 22222 3567777542 1 35
Q ss_pred EEEecCCCCeEEecc---cCcceeeeeeEE-ECCEEEEEc
Q 014195 366 FQFNLNTLKWHVIGK---LPYRVKTTLAGY-WNGWLYFTS 401 (429)
Q Consensus 366 ~~yd~~~~~W~~v~~---lp~~r~~~~~~~-~~~~i~v~G 401 (429)
.+||+++++++.... +|.... .+++. -+|.||+.+
T Consensus 562 ~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t 600 (781)
T 3v9f_A 562 CFPSARNFDYQVFQRKEGLPNTHI-RAISEDKNGNIWAST 600 (781)
T ss_dssp EESCTTTCCCEEECGGGTCSCCCC-CEEEECSSSCEEEEC
T ss_pred EEECCCCCcEEEccccCCCCCceE-EEEEECCCCCEEEEc
Confidence 889999888877632 333222 22222 246676654
No 139
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=94.09 E-value=3.8 Score=38.26 Aligned_cols=95 Identities=12% Similarity=0.089 Sum_probs=50.9
Q ss_pred CCeEEccCCCCCccCCcEEEE---CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCC---CCCCcc-------ceee
Q 014195 100 LKWEKMKAAPVPRLDGAAIQI---KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDM---PREMAH-------SHLG 166 (429)
Q Consensus 100 ~~W~~~~~~p~~R~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~---~~~~~r-------~~~~ 166 (429)
.+|+.+........-++++.- .+.||+.+...... .-+++.+-...+|+.+... +....+ .-.+
T Consensus 43 ~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g---~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~ 119 (394)
T 3b7f_A 43 RTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLG---PTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFW 119 (394)
T ss_dssp CSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CC---EEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEE
T ss_pred CCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCC---ccEEEeCCCCCCceECCccccCCCcccccccccccceeE
Confidence 589876421211222333333 45788765322111 1377777778899987532 211111 1123
Q ss_pred EEEe----CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCC
Q 014195 167 MVTD----GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP 206 (429)
Q Consensus 167 ~~~~----~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~ 206 (429)
+++. .+.||+.+- ...+++.+-...+|+.+.
T Consensus 120 l~~~~~~~~~~l~~g~~---------~ggl~~S~DgG~tW~~~~ 154 (394)
T 3b7f_A 120 LTPGHASEPGTWYAGTS---------PQGLFRSTDHGASWEPVA 154 (394)
T ss_dssp EEECCTTSTTCEEEEEE---------TTEEEEESSTTSBCEECH
T ss_pred EEeCCCCCCCEEEEEec---------CCcEEEEcCCCCCeEECc
Confidence 4443 567877542 246888888888999885
No 140
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=94.08 E-value=0.71 Score=41.42 Aligned_cols=101 Identities=7% Similarity=0.008 Sum_probs=48.3
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 199 (429)
++.+++.|+.++ .+.+||..+.+-... +... ...-.+++.. ++.+++.|+.+ ..+..||..+
T Consensus 66 ~~~~l~s~s~d~------~i~vwd~~~~~~~~~--~~~h-~~~v~~~~~~~~~~~l~sgs~D--------~~v~lWd~~~ 128 (304)
T 2ynn_A 66 RKNWIIVGSDDF------RIRVFNYNTGEKVVD--FEAH-PDYIRSIAVHPTKPYVLSGSDD--------LTVKLWNWEN 128 (304)
T ss_dssp GGTEEEEEETTS------EEEEEETTTCCEEEE--EECC-SSCEEEEEECSSSSEEEEEETT--------SCEEEEEGGG
T ss_pred CCCEEEEECCCC------EEEEEECCCCcEEEE--EeCC-CCcEEEEEEcCCCCEEEEECCC--------CeEEEEECCC
Confidence 456667776543 478899887754321 1110 1112233333 45566666643 3566777765
Q ss_pred CceEeCCCCCCCCCCceEEEE---CCEEEEEeCCCCCCCCccccceEe
Q 014195 200 KKWQDLPPLPVPRYAPATQLW---RGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 200 ~~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
+. .....+......-..+.+ ++.+++.|+.+ ..+..|++
T Consensus 129 ~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D-----~~v~iwd~ 170 (304)
T 2ynn_A 129 NW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD-----RTVKVWSL 170 (304)
T ss_dssp TT-EEEEEECCCCSCEEEEEECTTCTTEEEEEETT-----SEEEEEET
T ss_pred Cc-chhhhhcccCCcEEEEEECCCCCCEEEEEeCC-----CeEEEEEC
Confidence 42 111111111111122222 45677777765 34666764
No 141
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=94.02 E-value=1.1 Score=41.50 Aligned_cols=65 Identities=2% Similarity=-0.067 Sum_probs=35.8
Q ss_pred eeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCC
Q 014195 138 SHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPP 207 (429)
Q Consensus 138 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~ 207 (429)
..++++|+.+.+-+.+...+. ...+....- +++.+++....... .....++.+|..+.....+..
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~~---~~~~~~~sp~dg~~l~~~~~~~~~--~~~~~l~~~d~~~~~~~~l~~ 233 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQENQ---WLGHPIYRPYDDSTVAFCHEGPHD--LVDARMWLINEDGTNMRKVKT 233 (388)
T ss_dssp EEEEEEETTTCCEEEEEEESS---CEEEEEEETTEEEEEEEEECSCTT--TSSCSEEEEETTSCCCEESCC
T ss_pred ceEEEEECCCCceEEeecCCc---cccccEECCCCCCEEEEEEecCCC--CCcceEEEEeCCCCceEEeee
Confidence 569999999887666543222 222222222 34433333221111 114589999998887777654
No 142
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=93.98 E-value=3.3 Score=37.15 Aligned_cols=52 Identities=13% Similarity=0.072 Sum_probs=32.2
Q ss_pred CCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEEecccCcc--eeeeeeEEECCEEEEEcccCCC
Q 014195 340 NNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIGKLPYR--VKTTLAGYWNGWLYFTSGQRDK 406 (429)
Q Consensus 340 ~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v~~lp~~--r~~~~~~~~~~~i~v~GG~~~~ 406 (429)
++++++.|+.++ .|.+||..+.+-. ..+... ..-.++. .++++++.|+.+..
T Consensus 262 ~~~~l~~~~~dg------------~i~vwd~~~~~~~--~~~~~~h~~~v~~~~-~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 262 RHKFLYTAGSDG------------IISCWNLQTRKKI--KNFAKFNEDSVVKIA-CSDNILCLATSDDT 315 (342)
T ss_dssp TTCCEEEEETTS------------CEEEEETTTTEEE--EECCCCSSSEEEEEE-ECSSEEEEEEECTH
T ss_pred CCCEEEEecCCc------------eEEEEcCccHhHh--hhhhcccCCCceEec-CCCCeEEEEecCCc
Confidence 567777777542 6889998876543 223322 1223334 88888888887654
No 143
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=93.96 E-value=1.7 Score=39.08 Aligned_cols=101 Identities=9% Similarity=0.017 Sum_probs=51.0
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCc----eeeCCCCCCCCccceeeEEEe-CCE-EEEEeCeeCCCCCCCCceeEE
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNT----WGGRFDMPREMAHSHLGMVTD-GRY-IYVVTGQYGPQCRGPTAHTFV 194 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~----W~~~~~~~~~~~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~~~~~~~ 194 (429)
++.++++|+.++ .+.+||..+.+ -..+.... ..-.+++.. ++. +++.|+. ...+..
T Consensus 22 ~~~~l~~~~~d~------~v~iw~~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~l~~~~~--------dg~i~~ 83 (342)
T 1yfq_A 22 SKSLLLITSWDG------SLTVYKFDIQAKNVDLLQSLRYK----HPLLCCNFIDNTDLQIYVGTV--------QGEILK 83 (342)
T ss_dssp GGTEEEEEETTS------EEEEEEEETTTTEEEEEEEEECS----SCEEEEEEEESSSEEEEEEET--------TSCEEE
T ss_pred CCCEEEEEcCCC------eEEEEEeCCCCccccceeeeecC----CceEEEEECCCCCcEEEEEcC--------CCeEEE
Confidence 445566666443 47778877665 32222111 112233332 556 6666664 346888
Q ss_pred EeC-CCCceEeCCCCCCCCCCceEEEECCEEEEEeCCCCCCCCccccceEe
Q 014195 195 LDT-ETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 195 yd~-~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
||. .+.+...+...+....-.++....+.+++.|+.+ ..+..|++
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d-----~~i~iwd~ 129 (342)
T 1yfq_A 84 VDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD-----GLIEVIDP 129 (342)
T ss_dssp ECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETT-----SEEEEECH
T ss_pred EEeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCC-----CeEEEEcc
Confidence 998 8877665544111111122333325566666654 23555653
No 144
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=93.95 E-value=4.3 Score=38.34 Aligned_cols=101 Identities=9% Similarity=0.058 Sum_probs=52.0
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 199 (429)
++.+++.|+.++ .+.++|..++....+...... .....++... ++.+++.|+.+ ..+..||..+
T Consensus 176 ~~~~l~s~s~D~------~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~g~~d--------g~i~~wd~~~ 240 (435)
T 4e54_B 176 NTNQFYASSMEG------TTRLQDFKGNILRVFASSDTI-NIWFCSLDVSASSRMVVTGDNV--------GNVILLNMDG 240 (435)
T ss_dssp CTTEEEEECSSS------CEEEEETTSCEEEEEECCSSC-SCCCCCEEEETTTTEEEEECSS--------SBEEEEESSS
T ss_pred CCCEEEEEeCCC------EEEEeeccCCceeEEeccCCC-CccEEEEEECCCCCEEEEEeCC--------CcEeeeccCc
Confidence 455677777654 377889888766544332211 1112233332 56677777643 4577888765
Q ss_pred CceEeCCCCCCCCCCceEEEE---CCEEEEEeCCCCCCCCccccceEe
Q 014195 200 KKWQDLPPLPVPRYAPATQLW---RGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 200 ~~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
..- ..+......-..+.+ ++.+++.|+.+ ..+..|++
T Consensus 241 ~~~---~~~~~h~~~v~~v~~~p~~~~~~~s~s~d-----~~v~iwd~ 280 (435)
T 4e54_B 241 KEL---WNLRMHKKKVTHVALNPCCDWFLATASVD-----QTVKIWDL 280 (435)
T ss_dssp CBC---CCSBCCSSCEEEEEECTTCSSEEEEEETT-----SBCCEEET
T ss_pred cee---EEEecccceEEeeeecCCCceEEEEecCc-----ceeeEEec
Confidence 432 222211111222232 34477777755 34667764
No 145
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=93.80 E-value=6.5 Score=39.91 Aligned_cols=99 Identities=18% Similarity=0.283 Sum_probs=59.6
Q ss_pred CcEEEECCEEEEEeccCCCCceeeeEEEEECCCCc--eeeCCCCCCCC------ccceeeEEEeCCEEEEEeCeeCCCCC
Q 014195 115 GAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREM------AHSHLGMVTDGRYIYVVTGQYGPQCR 186 (429)
Q Consensus 115 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~------~r~~~~~~~~~~~lyv~GG~~~~~~~ 186 (429)
.+-++.++.||+.... ..++++|..+.+ |+.-...+... .....+.++.+++||+...
T Consensus 71 ~~P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~------- 136 (677)
T 1kb0_A 71 ATPVVVDGIMYVSASW-------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------- 136 (677)
T ss_dssp CCCEEETTEEEEECGG-------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-------
T ss_pred eCCEEECCEEEEECCC-------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC-------
Confidence 3445679999997652 358899988775 87644332100 0112345677899988632
Q ss_pred CCCceeEEEeCCCCc--eEeCCC-C-CC-CCCCceEEEECCEEEEEeC
Q 014195 187 GPTAHTFVLDTETKK--WQDLPP-L-PV-PRYAPATQLWRGRLHVMGG 229 (429)
Q Consensus 187 ~~~~~~~~yd~~t~~--W~~~~~-~-p~-~r~~~~~~~~~~~lyv~GG 229 (429)
...++++|.+|.+ |+.-.. - +. .....+-++.++++|+..+
T Consensus 137 --dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~ 182 (677)
T 1kb0_A 137 --DGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNG 182 (677)
T ss_dssp --TSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCB
T ss_pred --CCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEec
Confidence 3578999998765 876432 1 11 1122334566888887654
No 146
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=93.75 E-value=1.5 Score=39.32 Aligned_cols=65 Identities=6% Similarity=0.051 Sum_probs=33.3
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCC--ceeeCCCCCCCCccceeeEEEe---CCEEEEEeCeeCCCCCCCCceeEEE
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDN--TWGGRFDMPREMAHSHLGMVTD---GRYIYVVTGQYGPQCRGPTAHTFVL 195 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~y 195 (429)
++.+++.|+.++ .+.+||..+. .++.+..+... ...-.+++.. ++.+++.|+.+ ..+..|
T Consensus 22 ~~~~l~~~~~dg------~i~iw~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~d~~~l~s~~~d--------g~v~vw 86 (351)
T 3f3f_A 22 YGRHVATCSSDQ------HIKVFKLDKDTSNWELSDSWRAH-DSSIVAIDWASPEYGRIIASASYD--------KTVKLW 86 (351)
T ss_dssp SSSEEEEEETTS------EEEEEEECSSSCCEEEEEEEECC-SSCEEEEEECCGGGCSEEEEEETT--------SCEEEE
T ss_pred CCCEEEEeeCCC------eEEEEECCCCCCcceecceeccC-CCcEEEEEEcCCCCCCEEEEEcCC--------CeEEEE
Confidence 455667776543 3667776643 44443322211 1112333443 26677777653 356677
Q ss_pred eCCCC
Q 014195 196 DTETK 200 (429)
Q Consensus 196 d~~t~ 200 (429)
|..+.
T Consensus 87 d~~~~ 91 (351)
T 3f3f_A 87 EEDPD 91 (351)
T ss_dssp EECTT
T ss_pred ecCCC
Confidence 77654
No 147
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=93.65 E-value=0.98 Score=40.70 Aligned_cols=64 Identities=8% Similarity=-0.003 Sum_probs=41.0
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEE--eCCEEEEEeCeeCCCCCCCCceeEEEeCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT--DGRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~ 198 (429)
.+.+|+....+ ..+.+||+.+++....-..+. ... .+++ .+..+|+.+.. ...++.+|+.
T Consensus 9 ~~~~~v~~~~~------~~v~~~d~~~~~~~~~~~~~~---~~~-~~~~s~dg~~l~~~~~~--------~~~i~~~d~~ 70 (331)
T 3u4y_A 9 SNFGIVVEQHL------RRISFFSTDTLEILNQITLGY---DFV-DTAITSDCSNVVVTSDF--------CQTLVQIETQ 70 (331)
T ss_dssp CCEEEEEEGGG------TEEEEEETTTCCEEEEEECCC---CEE-EEEECSSSCEEEEEEST--------TCEEEEEECS
T ss_pred CCEEEEEecCC------CeEEEEeCcccceeeeEEccC---Ccc-eEEEcCCCCEEEEEeCC--------CCeEEEEECC
Confidence 46788877643 358999999998865433332 112 3333 24468877542 3488999998
Q ss_pred CCce
Q 014195 199 TKKW 202 (429)
Q Consensus 199 t~~W 202 (429)
+.+.
T Consensus 71 ~~~~ 74 (331)
T 3u4y_A 71 LEPP 74 (331)
T ss_dssp SSSC
T ss_pred CCce
Confidence 8874
No 148
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=93.62 E-value=1.5 Score=41.29 Aligned_cols=83 Identities=10% Similarity=0.022 Sum_probs=47.7
Q ss_pred eEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceE
Q 014195 139 HVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPAT 217 (429)
Q Consensus 139 ~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~ 217 (429)
.|.++|..+++...+-.+... ...-.+++.. ++.+++.|+.+ ..+.+||..+.+-...- ........+
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~-~~~V~sv~fspdg~~lasgs~D--------g~v~iWd~~~~~~~~~~--~~h~~~v~~ 194 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQP-GEYISSVAWIKEGNYLAVGTSS--------AEVQLWDVQQQKRLRNM--TSHSARVGS 194 (420)
T ss_dssp EEEEEETTTCCEEEEEECCST-TCCEEEEEECTTSSEEEEEETT--------SCEEEEETTTTEEEEEE--CCCSSCEEE
T ss_pred EEEEEECCCCCEEEEEEecCC-CCcEEEEEECCCCCEEEEEECC--------CeEEEEEcCCCcEEEEE--eCCCCceEE
Confidence 589999999887665444331 1112233333 56677777643 46778898887543322 111222334
Q ss_pred EEECCEEEEEeCCCC
Q 014195 218 QLWRGRLHVMGGSGE 232 (429)
Q Consensus 218 ~~~~~~lyv~GG~~~ 232 (429)
...++.+.+.|+.+.
T Consensus 195 ~s~~~~~l~sgs~d~ 209 (420)
T 4gga_A 195 LSWNSYILSSGSRSG 209 (420)
T ss_dssp EEEETTEEEEEETTS
T ss_pred EeeCCCEEEEEeCCC
Confidence 455777777777653
No 149
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.61 E-value=4.3 Score=37.25 Aligned_cols=63 Identities=2% Similarity=-0.112 Sum_probs=35.7
Q ss_pred eeEEEEECCCCceeeCCCCCCCCccceeeEEEe--CC-EEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCC
Q 014195 138 SHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GR-YIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPP 207 (429)
Q Consensus 138 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~-~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~ 207 (429)
..++++|+.+.+...+...+. . ....... ++ +|++... .... .....++.+|..+.++..+..
T Consensus 168 ~~l~~~d~~~g~~~~~~~~~~---~-~~~~~~sp~dg~~l~~~~~-~~~~--~~~~~l~~~d~~~~~~~~l~~ 233 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQDTA---W-LGHPIYRPFDDSTVGFCHE-GPHD--LVDARMWLVNEDGSNVRKIKE 233 (396)
T ss_dssp EEEEEEETTTCCEEEEEEESS---C-EEEEEEETTEEEEEEEEEC-SCSS--SCSCCCEEEETTSCCCEESSC
T ss_pred ceEEEEECCCCcEEeeccCCc---c-cccceECCCCCCEEEEEec-CCCC--CCCceEEEEECCCCceeEeec
Confidence 468999999988776643211 1 1222222 24 3554432 1111 112589999998888877754
No 150
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=93.43 E-value=0.69 Score=42.89 Aligned_cols=65 Identities=6% Similarity=0.109 Sum_probs=35.2
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe--CCEEEEEeCeeCCCCCCCCceeEEEeCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~ 198 (429)
++.+++.|+.++ .+.+||..+.+-...-..+. .......... ++.+++.|+. ...+..||..
T Consensus 111 ~~~~l~s~~~d~------~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--------~~~v~~~d~~ 174 (408)
T 4a11_B 111 DTGMFTSSSFDK------TLKVWDTNTLQTADVFNFEE--TVYSHHMSPVSTKHCLVAVGTR--------GPKVQLCDLK 174 (408)
T ss_dssp CTTCEEEEETTS------EEEEEETTTTEEEEEEECSS--CEEEEEECSSCSSCCEEEEEES--------SSSEEEEESS
T ss_pred CCcEEEEEeCCC------eEEEeeCCCCccceeccCCC--ceeeeEeecCCCCCcEEEEEcC--------CCeEEEEeCC
Confidence 345677776543 47889988876554433332 1111211111 3346666654 3467788887
Q ss_pred CCc
Q 014195 199 TKK 201 (429)
Q Consensus 199 t~~ 201 (429)
+.+
T Consensus 175 ~~~ 177 (408)
T 4a11_B 175 SGS 177 (408)
T ss_dssp SSC
T ss_pred Ccc
Confidence 654
No 151
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=93.43 E-value=2.4 Score=38.42 Aligned_cols=66 Identities=12% Similarity=0.083 Sum_probs=36.1
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCC-CCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRF-DMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~-~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~ 198 (429)
++.+++.|+.++ .+.+||..+.+-...- .+... ...-.+++.. ++..++.|+. ...+..||..
T Consensus 127 ~~~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~--------dg~i~i~d~~ 191 (366)
T 3k26_A 127 DPNLLLSVSKDH------ALRLWNIQTDTLVAIFGGVEGH-RDEVLSADYDLLGEKIMSCGM--------DHSLKLWRIN 191 (366)
T ss_dssp CTTEEEEEETTS------CEEEEETTTTEEEEEECSTTSC-SSCEEEEEECTTSSEEEEEET--------TSCEEEEESC
T ss_pred CCCEEEEEeCCC------eEEEEEeecCeEEEEecccccc-cCceeEEEECCCCCEEEEecC--------CCCEEEEECC
Confidence 456777777643 3888999877654321 11111 1122333332 4556666664 2357788887
Q ss_pred CCc
Q 014195 199 TKK 201 (429)
Q Consensus 199 t~~ 201 (429)
+.+
T Consensus 192 ~~~ 194 (366)
T 3k26_A 192 SKR 194 (366)
T ss_dssp SHH
T ss_pred CCc
Confidence 653
No 152
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=93.30 E-value=2.5 Score=35.75 Aligned_cols=47 Identities=17% Similarity=0.352 Sum_probs=30.0
Q ss_pred CCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEE-----e----cccCcceeeeeeEEECCEEEEEcc
Q 014195 340 NNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHV-----I----GKLPYRVKTTLAGYWNGWLYFTSG 402 (429)
Q Consensus 340 ~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~-----v----~~lp~~r~~~~~~~~~~~i~v~GG 402 (429)
++++|+|-|. ..|+||..+++-.. + +.+|. .-.++...++++|+|-|
T Consensus 127 ~gk~yfFkG~--------------~ywr~d~~~~~~d~gyPr~i~~~~~Gip~--~iDaAf~~~g~~YfFkg 182 (207)
T 1pex_A 127 TGKTLLFSGN--------------QVWRYDDTNHIMDKDYPRLIEEDFPGIGD--KVDAVYEKNGYIYFFNG 182 (207)
T ss_dssp TSEEEEEETT--------------EEEEEETTTTEECSSCCCBHHHHSTTSCS--CCSEEEEETTEEEEEET
T ss_pred CCEEEEEeCC--------------EEEEEeCcCccccCCCCccHHHcCCCCCC--CccEEEEcCCcEEEEEC
Confidence 4799999874 68999987653110 0 12221 22345567999999977
No 153
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=93.26 E-value=1.7 Score=47.43 Aligned_cols=130 Identities=10% Similarity=0.067 Sum_probs=60.3
Q ss_pred cccccccccCCCeEEccCCCCCccCCcEEEECCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEE
Q 014195 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT 169 (429)
Q Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~ 169 (429)
..+..+|..+.....+.... ..-.++....+..++.|+.++ .+.+||..+.+-...-.... .........
T Consensus 1025 g~i~vwd~~~~~~~~~~~~~--~~v~~~~~~~~~~l~~~~~dg------~v~vwd~~~~~~~~~~~~~~--~~v~~~~~s 1094 (1249)
T 3sfz_A 1025 SVIQVWNWQTGDYVFLQAHQ--ETVKDFRLLQDSRLLSWSFDG------TVKVWNVITGRIERDFTCHQ--GTVLSCAIS 1094 (1249)
T ss_dssp SBEEEEETTTTEEECCBCCS--SCEEEEEECSSSEEEEEESSS------EEEEEETTTTCCCEEEECCS--SCCCCEEEC
T ss_pred CEEEEEECCCCceEEEecCC--CcEEEEEEcCCCcEEEEECCC------cEEEEECCCCceeEEEcccC--CcEEEEEEC
Confidence 34556666655443322111 111122223343455665543 48889988776432211111 111112222
Q ss_pred eCCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEE--ECCEEEEEeCCCCCCCCccccceEe
Q 014195 170 DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQL--WRGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 170 ~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
-++..++.|+.+ ..+..||..+.+ .+..+......-..+. -++++++.|+.++ .+..|++
T Consensus 1095 ~d~~~l~s~s~d--------~~v~iwd~~~~~--~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg-----~i~vwd~ 1156 (1249)
T 3sfz_A 1095 SDATKFSSTSAD--------KTAKIWSFDLLS--PLHELKGHNGCVRCSAFSLDGILLATGDDNG-----EIRIWNV 1156 (1249)
T ss_dssp SSSSSCEEECCS--------SCCCEECSSSSS--CSBCCCCCSSCEEEEEECSSSSEEEEEETTS-----CCCEEES
T ss_pred CCCCEEEEEcCC--------CcEEEEECCCcc--eeeeeccCCCcEEEEEECCCCCEEEEEeCCC-----EEEEEEC
Confidence 355667777653 345677776654 2222221111122222 3677888887653 4677774
No 154
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=93.04 E-value=2.8 Score=37.78 Aligned_cols=96 Identities=10% Similarity=0.069 Sum_probs=53.0
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 199 (429)
++.||+.+..+ ..+++||+.+++...+...+. ..-.+++.. ++++|+....+.. ....+++||+++
T Consensus 55 ~g~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~~---~~~~~i~~~~dg~l~v~~~~~~~----~~~~i~~~d~~~ 121 (333)
T 2dg1_A 55 QGQLFLLDVFE------GNIFKINPETKEIKRPFVSHK---ANPAAIKIHKDGRLFVCYLGDFK----STGGIFAATENG 121 (333)
T ss_dssp TSCEEEEETTT------CEEEEECTTTCCEEEEEECSS---SSEEEEEECTTSCEEEEECTTSS----SCCEEEEECTTS
T ss_pred CCCEEEEECCC------CEEEEEeCCCCcEEEEeeCCC---CCcceEEECCCCcEEEEeCCCCC----CCceEEEEeCCC
Confidence 56788876532 248999999988776532111 223344443 6678887532211 135789999998
Q ss_pred CceEeC-CCCCCCCCCceEEE-ECCEEEEEeC
Q 014195 200 KKWQDL-PPLPVPRYAPATQL-WRGRLHVMGG 229 (429)
Q Consensus 200 ~~W~~~-~~~p~~r~~~~~~~-~~~~lyv~GG 229 (429)
.+...+ ........-..++. -++++|+...
T Consensus 122 ~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 153 (333)
T 2dg1_A 122 DNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDF 153 (333)
T ss_dssp CSCEEEECSSSSCCCEEEEEECTTSCEEEEEC
T ss_pred CEEEEEEccCccCCcccceEECCCCCEEEEec
Confidence 876532 22211111122222 2677887643
No 155
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=92.97 E-value=3.1 Score=37.02 Aligned_cols=31 Identities=6% Similarity=0.230 Sum_probs=20.1
Q ss_pred ECCEEEEEcccCCCCCCccceeeeCcEEEEecCC-CCeEEeccc
Q 014195 339 VNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNT-LKWHVIGKL 381 (429)
Q Consensus 339 ~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~-~~W~~v~~l 381 (429)
.++++++.|+.++ .|.+||..+ +.|..+..+
T Consensus 316 ~~~~~l~s~~~dg------------~v~iw~~~~~~~~~~~~~~ 347 (351)
T 3f3f_A 316 LTGTILSSAGDDG------------KVRLWKATYSNEFKCMSVI 347 (351)
T ss_dssp SSSCCEEEEETTS------------CEEEEEECTTSCEEEEEEE
T ss_pred CCCCEEEEecCCC------------cEEEEecCcCcchhheeeh
Confidence 3567777777653 577777776 467666543
No 156
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=92.60 E-value=9.7 Score=38.53 Aligned_cols=78 Identities=13% Similarity=0.114 Sum_probs=45.2
Q ss_pred EEEECCEEEEEeccCCCCceeeeEEEEECCCCc--eeeCCCCCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCCceeEE
Q 014195 117 AIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFV 194 (429)
Q Consensus 117 ~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~ 194 (429)
.++.+++||+... + ..+..+|..+.+ |+.-..-+........+.++.++.||+..+. ... .....++.
T Consensus 113 ~~~~~~~v~v~~~-d------g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~-~~~--~~~g~v~a 182 (668)
T 1kv9_A 113 VALWGDKVYVGTL-D------GRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGG-AEY--GVRGFVSA 182 (668)
T ss_dssp CEEEBTEEEEECT-T------SEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBC-TTT--CCBCEEEE
T ss_pred eEEECCEEEEEcC-C------CEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCC-CCc--CCCCEEEE
Confidence 4556888887542 1 348999998875 8753221111112223445668888774321 110 11457999
Q ss_pred EeCCCCc--eEe
Q 014195 195 LDTETKK--WQD 204 (429)
Q Consensus 195 yd~~t~~--W~~ 204 (429)
||+.|.+ |+.
T Consensus 183 ~D~~tG~~~W~~ 194 (668)
T 1kv9_A 183 YDADTGKLAWRF 194 (668)
T ss_dssp EETTTCCEEEEE
T ss_pred EECCCCcEEEEe
Confidence 9998865 876
No 157
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=92.01 E-value=6.1 Score=34.83 Aligned_cols=87 Identities=7% Similarity=0.006 Sum_probs=50.4
Q ss_pred CEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCCC
Q 014195 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (429)
Q Consensus 122 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 200 (429)
+.||+++..+ ..+++||+.++ .+.+.. +. ..-.+++.. ++++|+.... ...+.+||+.+.
T Consensus 40 ~~l~~~~~~~------~~i~~~~~~~~-~~~~~~-~~---~~~~~l~~~~dg~l~v~~~~--------~~~i~~~d~~~g 100 (296)
T 3e5z_A 40 SAVIFSDVRQ------NRTWAWSDDGQ-LSPEMH-PS---HHQNGHCLNKQGHLIACSHG--------LRRLERQREPGG 100 (296)
T ss_dssp TEEEEEEGGG------TEEEEEETTSC-EEEEES-SC---SSEEEEEECTTCCEEEEETT--------TTEEEEECSTTC
T ss_pred CEEEEEeCCC------CEEEEEECCCC-eEEEEC-CC---CCcceeeECCCCcEEEEecC--------CCeEEEEcCCCC
Confidence 3588887543 24889999988 555432 11 122344443 6678876421 357899999888
Q ss_pred ceEeCCCCC----CCCCCceEEEECCEEEEE
Q 014195 201 KWQDLPPLP----VPRYAPATQLWRGRLHVM 227 (429)
Q Consensus 201 ~W~~~~~~p----~~r~~~~~~~~~~~lyv~ 227 (429)
+.+.+.... ..+....++.-+++||+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vt 131 (296)
T 3e5z_A 101 EWESIADSFEGKKLNSPNDVCLAPDGSLWFS 131 (296)
T ss_dssp CEEEEECEETTEECCCCCCEEECTTSCEEEE
T ss_pred cEEEEeeccCCCCCCCCCCEEECCCCCEEEE
Confidence 877653211 111222233347788886
No 158
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=91.96 E-value=3.4 Score=36.88 Aligned_cols=148 Identities=10% Similarity=0.029 Sum_probs=66.8
Q ss_pred eeeecCCCcccceeeeeeecCCCCe--EEecCCCCC-CCcceeeeecC-CCCcCcccccccccccccCCCeEEccCCCCC
Q 014195 36 FWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQ-KGENIGVKTKK-DVVPKRILPATFQDLPAPELKWEKMKAAPVP 111 (429)
Q Consensus 36 ly~~GG~~~~~~~~~~~~yd~~~~~--~~~p~~~~r-~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 111 (429)
+++.++.++ .+..||+.+.+ ..++..... ...+++..... ...........+..+|..+.+-...-..+.+
T Consensus 3 ~~v~~~~~~-----~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~ 77 (337)
T 1pby_B 3 YILAPARPD-----KLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP 77 (337)
T ss_dssp EEEEEETTT-----EEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT
T ss_pred EEEEcCCCC-----eEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc
Confidence 445555444 67889998877 333321100 01112211111 1111111234567777776654322112110
Q ss_pred ----ccCCcEEEE-CC-EEEEEecc---CCCCc--eeeeEEEEECCCCceeeCCCCCCCCccceeeEEE--eCCEEEEEe
Q 014195 112 ----RLDGAAIQI-KN-LLYVFAGY---GSIDY--VHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT--DGRYIYVVT 178 (429)
Q Consensus 112 ----R~~~~~~~~-~~-~iyv~GG~---~~~~~--~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~--~~~~lyv~G 178 (429)
..-+.++.. ++ .||+.... ..... ....+.+||+.+.+....-+... . ...+++ .+..||+..
T Consensus 78 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~--~--~~~~~~s~dg~~l~~~~ 153 (337)
T 1pby_B 78 EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR--Q--ITMLAWARDGSKLYGLG 153 (337)
T ss_dssp TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS--S--CCCEEECTTSSCEEEES
T ss_pred ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCC--C--cceeEECCCCCEEEEeC
Confidence 012233333 34 67776421 11110 12569999998876543222221 1 122233 244576651
Q ss_pred CeeCCCCCCCCceeEEEeCCCCceE
Q 014195 179 GQYGPQCRGPTAHTFVLDTETKKWQ 203 (429)
Q Consensus 179 G~~~~~~~~~~~~~~~yd~~t~~W~ 203 (429)
..+..+|+.+.+-.
T Consensus 154 -----------~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 154 -----------RDLHVMDPEAGTLV 167 (337)
T ss_dssp -----------SSEEEEETTTTEEE
T ss_pred -----------CeEEEEECCCCcEe
Confidence 35888998887644
No 159
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=91.91 E-value=9.6 Score=38.67 Aligned_cols=241 Identities=10% Similarity=0.054 Sum_probs=108.8
Q ss_pred ccccccccCCCeEEccCCCCCccCCcEEEECCEEEEEeccCCC-------CceeeeEEEEECCCCcee--eCCCCCC-CC
Q 014195 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSI-------DYVHSHVDIYNFTDNTWG--GRFDMPR-EM 160 (429)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~-------~~~~~~~~~yd~~~~~W~--~~~~~~~-~~ 160 (429)
.+..+|..+++.... .++..+....+.. +++-+++.-.+.. ......+++++..+.+=+ .+...+. .
T Consensus 156 ~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~- 232 (693)
T 3iuj_A 156 EIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQ- 232 (693)
T ss_dssp EEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGG-
T ss_pred EEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCC-
Confidence 455667777665443 1222222333344 6543333333321 012345888888776531 2222211 0
Q ss_pred ccceeeEE-EeCCE-EEEEeCeeCCCCCCCCceeEEEeCCCC--ceEeCCCCCCCCCCceEEEECCEEEEEeCCCCCCCC
Q 014195 161 AHSHLGMV-TDGRY-IYVVTGQYGPQCRGPTAHTFVLDTETK--KWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYT 236 (429)
Q Consensus 161 ~r~~~~~~-~~~~~-lyv~GG~~~~~~~~~~~~~~~yd~~t~--~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~ 236 (429)
+....++. .-+++ |++... .+.. .++++.+|..+. .|..+.+-..... ......+++||+....+..
T Consensus 233 ~~~~~~~~~SpDg~~l~~~~~-~~~~----~~~i~~~d~~~~~~~~~~l~~~~~~~~-~~~~~~g~~l~~~t~~~~~--- 303 (693)
T 3iuj_A 233 HHRYVGATVTEDDRFLLISAA-NSTS----GNRLYVKDLSQENAPLLTVQGDLDADV-SLVDNKGSTLYLLTNRDAP--- 303 (693)
T ss_dssp CCSEEEEEECTTSCEEEEEEE-SSSS----CCEEEEEETTSTTCCCEEEECSSSSCE-EEEEEETTEEEEEECTTCT---
T ss_pred CeEEEEEEEcCCCCEEEEEEc-cCCC----CcEEEEEECCCCCCceEEEeCCCCceE-EEEeccCCEEEEEECCCCC---
Confidence 11122222 22444 444322 1111 368999998776 6777643221111 1133457899998764321
Q ss_pred ccccceEeeeecCCccccceeeccCCCCCCCceeEEEeCCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-C
Q 014195 237 PEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-D 315 (429)
Q Consensus 237 ~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~ 315 (429)
....+...+. .+....|+.+.+-..... .....++.|++..-.++ ...++.+| .
T Consensus 304 -~~~l~~~d~~--~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g--------------------~~~l~~~d~~ 358 (693)
T 3iuj_A 304 -NRRLVTVDAA--NPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDA--------------------TARVEQFDYE 358 (693)
T ss_dssp -TCEEEEEETT--SCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETT--------------------EEEEEEECTT
T ss_pred -CCEEEEEeCC--CCCccccEEEecCCCCEE--EEEEECCEEEEEEEECC--------------------eeEEEEEECC
Confidence 1222222111 123346887655433322 44455666665543321 12477777 5
Q ss_pred CCCeEEcCCCCCCCCCcceeEEEECC-EEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEEec
Q 014195 316 EMKWKVLPSMPKPDSHIEFAWVLVNN-SIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIG 379 (429)
Q Consensus 316 ~~~W~~~~~~~~~r~~~~~~~~~~~~-~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v~ 379 (429)
....+.+. +|........+ ...++ .|++.. .+... -..++.||..+.+++.+.
T Consensus 359 g~~~~~l~-~p~~~~~~~~~-~~~d~~~l~~~~-ss~~t--------P~~l~~~d~~~g~~~~l~ 412 (693)
T 3iuj_A 359 GKRVREVA-LPGLGSVSGFN-GKHDDPALYFGF-ENYAQ--------PPTLYRFEPKSGAISLYR 412 (693)
T ss_dssp SCEEEEEC-CSSSSEEEECC-CCTTCSCEEEEE-ECSSS--------CCEEEEECTTTCCEEEEE
T ss_pred CCeeEEee-cCCCceEEeee-cCCCCCEEEEEe-cCCCC--------CCEEEEEECCCCeEEEEE
Confidence 44334432 33221111110 11133 333332 22111 137999999888887764
No 160
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=91.82 E-value=4.8 Score=36.13 Aligned_cols=68 Identities=15% Similarity=0.181 Sum_probs=40.9
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe--CCEEEEEeCeeCCCCCCCCceeEEEeCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~ 198 (429)
++++|+.++.+ ..++++|+.+++....-+.+. ....+.+++. ++.+|+.+.. ...+++||+.
T Consensus 10 ~~~~~v~~~~~------~~v~~~d~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~~~v~~~~--------~~~i~~~d~~ 73 (349)
T 1jmx_B 10 GHEYMIVTNYP------NNLHVVDVASDTVYKSCVMPD--KFGPGTAMMAPDNRTAYVLNNH--------YGDIYGIDLD 73 (349)
T ss_dssp TCEEEEEEETT------TEEEEEETTTTEEEEEEECSS--CCSSCEEEECTTSSEEEEEETT--------TTEEEEEETT
T ss_pred CCEEEEEeCCC------CeEEEEECCCCcEEEEEecCC--CCCCceeEECCCCCEEEEEeCC--------CCcEEEEeCC
Confidence 56788887653 358999999887654322222 0011233333 4468877532 4578999999
Q ss_pred CCceEe
Q 014195 199 TKKWQD 204 (429)
Q Consensus 199 t~~W~~ 204 (429)
+.+-..
T Consensus 74 t~~~~~ 79 (349)
T 1jmx_B 74 TCKNTF 79 (349)
T ss_dssp TTEEEE
T ss_pred CCcEEE
Confidence 876543
No 161
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=91.82 E-value=4.7 Score=37.40 Aligned_cols=24 Identities=4% Similarity=0.025 Sum_probs=16.3
Q ss_pred CCEEEEEeCeeCCCCCCCCceeEEEeCCCCce
Q 014195 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKW 202 (429)
Q Consensus 171 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W 202 (429)
++.+++.|+.+ ..+.+||..+...
T Consensus 93 ~~~~l~s~s~d--------g~v~vw~~~~~~~ 116 (402)
T 2aq5_A 93 NDNVIASGSED--------CTVMVWEIPDGGL 116 (402)
T ss_dssp CTTEEEEEETT--------SEEEEEECCTTCC
T ss_pred CCCEEEEEeCC--------CeEEEEEccCCCC
Confidence 56677777642 4677888887654
No 162
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=91.70 E-value=0.69 Score=42.88 Aligned_cols=105 Identities=14% Similarity=0.132 Sum_probs=51.7
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCC----------CCCCccceeeEEEe--CCEEEEEeCeeCCCCCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDM----------PREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGP 188 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~----------~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~ 188 (429)
++.+++.|+.++ .+.+||..+.+....... +......-.+++.. ++.+++.|+.
T Consensus 55 ~~~~l~~~~~dg------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-------- 120 (408)
T 4a11_B 55 EGRYMLSGGSDG------VIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSF-------- 120 (408)
T ss_dssp TCCEEEEEETTS------CEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEET--------
T ss_pred CCCEEEEEcCCC------eEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeC--------
Confidence 467777777654 378888887654332110 00001112233333 4456666654
Q ss_pred CceeEEEeCCCCceEeCCCCCCCCCCceEEEE--CCEEEEEeCCCCCCCCccccceEe
Q 014195 189 TAHTFVLDTETKKWQDLPPLPVPRYAPATQLW--RGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 189 ~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
...+..||..+.+-...-..+.+......... ++.+++.|+.++ .+..|++
T Consensus 121 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~d~ 173 (408)
T 4a11_B 121 DKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGP-----KVQLCDL 173 (408)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSS-----SEEEEES
T ss_pred CCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCC-----eEEEEeC
Confidence 34678888888765443322221111111111 344667766542 3555653
No 163
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=91.62 E-value=1.8 Score=39.11 Aligned_cols=99 Identities=12% Similarity=0.112 Sum_probs=47.8
Q ss_pred CEEEEEeccCCCCceeeeEEEEECCCCc--eeeCCCCCCCCccceeeEEE-------eCCEEEEEeCeeCCCCCCCCcee
Q 014195 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREMAHSHLGMVT-------DGRYIYVVTGQYGPQCRGPTAHT 192 (429)
Q Consensus 122 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~r~~~~~~~-------~~~~lyv~GG~~~~~~~~~~~~~ 192 (429)
+.+++.|+.++ .+.+||..+.+ -..+..... .-.++.. .++.+++.|+. ...+
T Consensus 80 ~~~l~~~~~dg------~i~iwd~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~s~~~~~l~~~~~--------d~~i 141 (357)
T 3i2n_A 80 QRYLATGDFGG------NLHIWNLEAPEMPVYSVKGHKE----IINAIDGIGGLGIGEGAPEIVTGSR--------DGTV 141 (357)
T ss_dssp TCCEEEEETTS------CEEEECTTSCSSCSEEECCCSS----CEEEEEEESGGGCC-CCCEEEEEET--------TSCE
T ss_pred CceEEEecCCC------eEEEEeCCCCCccEEEEEeccc----ceEEEeeccccccCCCccEEEEEeC--------CCeE
Confidence 46777776543 37888888765 112211111 1112211 24556666664 2367
Q ss_pred EEEeCCCCc--eEeCCCCCC--CCCCceEE-----EECCEEEEEeCCCCCCCCccccceE
Q 014195 193 FVLDTETKK--WQDLPPLPV--PRYAPATQ-----LWRGRLHVMGGSGENRYTPEVDHWS 243 (429)
Q Consensus 193 ~~yd~~t~~--W~~~~~~p~--~r~~~~~~-----~~~~~lyv~GG~~~~~~~~~~~~~~ 243 (429)
..||+.+.+ ...+..... .+...+++ .-++++++.|+.++ .+..|+
T Consensus 142 ~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~-----~i~i~d 196 (357)
T 3i2n_A 142 KVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNG-----DIKLFD 196 (357)
T ss_dssp EEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTS-----EEEEEE
T ss_pred EEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCC-----eEEEEE
Confidence 788888764 333322221 11222222 13667777776542 355565
No 164
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=91.56 E-value=6.8 Score=39.57 Aligned_cols=61 Identities=8% Similarity=0.031 Sum_probs=31.5
Q ss_pred ceEEeC-CCCCeEEcCCCCCCCCCcceeEEEECC-EEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEEec
Q 014195 309 DVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLVNN-SIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIG 379 (429)
Q Consensus 309 ~v~~~d-~~~~W~~~~~~~~~r~~~~~~~~~~~~-~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v~ 379 (429)
.+|.+| .....+.+..-... .........++ .|++.+..+... ...+|.+|.++...+.+.
T Consensus 336 ~l~~~~~~~~~~~~l~~~~~~--v~~~~~~spdg~~l~~~~~~~~~~--------~~~l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 336 HLYLYDTTGRLIRQVTKGEWE--VTNFAGFDPKGTRLYFESTEASPL--------ERHFYCIDIKGGKTKDLT 398 (706)
T ss_dssp EEEEEETTSCEEEECCCSSSC--EEEEEEECTTSSEEEEEESSSCTT--------CBEEEEEETTCCCCEESC
T ss_pred EEEEEECCCCEEEecCCCCeE--EEeeeEEcCCCCEEEEEecCCCCc--------eEEEEEEEcCCCCceecc
Confidence 488887 56666666432111 11111122344 455555433211 237899999887766654
No 165
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=91.56 E-value=13 Score=37.66 Aligned_cols=107 Identities=7% Similarity=-0.072 Sum_probs=53.3
Q ss_pred ECCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCC---CCccceeeEEE-eCCEEEEEeCeeCCCCCCCCceeEEE
Q 014195 120 IKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPR---EMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVL 195 (429)
Q Consensus 120 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~---~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~y 195 (429)
-++++|.+--..+.. ...+|+.+.....|+.+.+.+. .....-.+... -+++.+++.-..+... ...++++
T Consensus 78 dG~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~---~~~i~v~ 152 (695)
T 2bkl_A 78 RNGRFFYVRTHKDKE--KAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAAD---EAVLHVI 152 (695)
T ss_dssp ETTEEEEEEECTTCS--SCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCS---CCEEEEE
T ss_pred ECCEEEEEEEcCCCe--EEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCc---eEEEEEE
Confidence 366666654332222 2457888888888887754322 00001111222 2555555543322221 4689999
Q ss_pred eCCCCceEeCCCCCCCCCCceEEEECCEEEEEeCCC
Q 014195 196 DTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSG 231 (429)
Q Consensus 196 d~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~ 231 (429)
|.++++......++.......+..-+++.+++...+
T Consensus 153 dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d 188 (695)
T 2bkl_A 153 DVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLP 188 (695)
T ss_dssp ETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECC
T ss_pred ECCCCCCcCCcccCcccccceEEecCCCEEEEEEec
Confidence 999988651112222221222223366666665543
No 166
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=91.55 E-value=4.4 Score=37.23 Aligned_cols=101 Identities=10% Similarity=0.007 Sum_probs=55.3
Q ss_pred EEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe--CCEEEEEeCeeCCCCCCCCceeEEEeCCCC
Q 014195 123 LLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (429)
Q Consensus 123 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 200 (429)
.+++.|+.++ .+.+||..+.+....-..... ...-.+++.. ++.+++.|+. ...+..||..+.
T Consensus 87 ~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~l~s~~~--------d~~i~iwd~~~~ 151 (383)
T 3ei3_B 87 TTVAVGSKGG------DIILWDYDVQNKTSFIQGMGP-GDAITGMKFNQFNTNQLFVSSI--------RGATTLRDFSGS 151 (383)
T ss_dssp TEEEEEEBTS------CEEEEETTSTTCEEEECCCST-TCBEEEEEEETTEEEEEEEEET--------TTEEEEEETTSC
T ss_pred CEEEEEcCCC------eEEEEeCCCcccceeeecCCc-CCceeEEEeCCCCCCEEEEEeC--------CCEEEEEECCCC
Confidence 5777777643 488999998877654333211 1222344444 3466666654 346788898876
Q ss_pred ceEeCCCCCCCCCCc-eEE-EECCEEEEEeCCCCCCCCccccceE
Q 014195 201 KWQDLPPLPVPRYAP-ATQ-LWRGRLHVMGGSGENRYTPEVDHWS 243 (429)
Q Consensus 201 ~W~~~~~~p~~r~~~-~~~-~~~~~lyv~GG~~~~~~~~~~~~~~ 243 (429)
....+.......... +++ .-++++++.|+.+ ..+..|+
T Consensus 152 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d 191 (383)
T 3ei3_B 152 VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDST-----GRLLLLG 191 (383)
T ss_dssp EEEEEECCCCSSCCEEEEEEETTTTEEEEEETT-----SEEEEEE
T ss_pred ceEEEeccCCCCCCeEEEEECCCCCEEEEECCC-----CCEEEEE
Confidence 665554322111111 222 2256677777655 2455565
No 167
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=91.48 E-value=2.6 Score=37.76 Aligned_cols=95 Identities=9% Similarity=-0.058 Sum_probs=43.3
Q ss_pred CEEEEEeccCCCCceeeeEEEEECCCCceee---CCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeC
Q 014195 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGG---RFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (429)
Q Consensus 122 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~---~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~ 197 (429)
+.+++.||.++ .+.++|+.+.+... ...+... ...-.+++.. ++++++.|+.+ ..+..++.
T Consensus 51 ~~~l~S~s~D~------~i~vWd~~~~~~~~~~~~~~l~~h-~~~V~~~~~s~dg~~l~s~~~d--------~~i~~~~~ 115 (340)
T 4aow_A 51 PDMILSASRDK------TIIMWKLTRDETNYGIPQRALRGH-SHFVSDVVISSDGQFALSGSWD--------GTLRLWDL 115 (340)
T ss_dssp TTEEEEEETTS------CEEEEEECCSSSCSEEEEEEECCC-SSCEEEEEECTTSSEEEEEETT--------SEEEEEET
T ss_pred CCEEEEEcCCC------eEEEEECCCCCcccceeeEEEeCC-CCCEEEEEECCCCCEEEEEccc--------ccceEEee
Confidence 46788888764 26677766554221 1111110 0111222222 55666666643 35666777
Q ss_pred CCCceEeCCCCCCCCCCceEEEECCEEEEEeCCC
Q 014195 198 ETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSG 231 (429)
Q Consensus 198 ~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~ 231 (429)
........................+..++.|+.+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d 149 (340)
T 4aow_A 116 TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 149 (340)
T ss_dssp TTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred cccceeeeecCCCCceeEEEEeecCccceeecCC
Confidence 6665444322221111111222245555666654
No 168
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=90.98 E-value=3.4 Score=42.11 Aligned_cols=33 Identities=9% Similarity=-0.126 Sum_probs=21.0
Q ss_pred CCEEEEEecc-CCCCceeeeEEEEECCCCceeeCC
Q 014195 121 KNLLYVFAGY-GSIDYVHSHVDIYNFTDNTWGGRF 154 (429)
Q Consensus 121 ~~~iyv~GG~-~~~~~~~~~~~~yd~~~~~W~~~~ 154 (429)
+++.+++++. ++... ...++++|..+.+...+.
T Consensus 47 dG~~la~~~~~d~~~~-~~~i~~~d~~~g~~~~~~ 80 (741)
T 2ecf_A 47 DGSRVTFLRGKDSDRN-QLDLWSYDIGSGQTRLLV 80 (741)
T ss_dssp TSSEEEEEECCSSCTT-EEEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEeccCCCCc-ccEEEEEECCCCceeEcc
Confidence 5555555554 43222 346999999999877654
No 169
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=90.96 E-value=13 Score=36.72 Aligned_cols=100 Identities=18% Similarity=0.266 Sum_probs=58.7
Q ss_pred CcEEEECCEEEEEeccCCCCceeeeEEEEEC-CCCc--eeeCCCCCCC-Cc-----cceeeEEEeCCEEEEEeCeeCCCC
Q 014195 115 GAAIQIKNLLYVFAGYGSIDYVHSHVDIYNF-TDNT--WGGRFDMPRE-MA-----HSHLGMVTDGRYIYVVTGQYGPQC 185 (429)
Q Consensus 115 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~-~~~~--W~~~~~~~~~-~~-----r~~~~~~~~~~~lyv~GG~~~~~~ 185 (429)
.+-++.++.||+....+ ..++++|. .+.+ |+.-...+.. .+ ....+.++.+++||+...
T Consensus 56 ~~P~v~~g~vyv~~~~~------~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------ 123 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAFP------NNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------ 123 (571)
T ss_dssp SCCEEETTEEEEECSTT------TCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------
T ss_pred cccEEECCEEEEEeCCC------CEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC------
Confidence 44556799999976521 24889998 7664 8764332210 00 112345677999988632
Q ss_pred CCCCceeEEEeCCCCc--eEeCC-CCCCC-CCCceEEEECCEEEEEeC
Q 014195 186 RGPTAHTFVLDTETKK--WQDLP-PLPVP-RYAPATQLWRGRLHVMGG 229 (429)
Q Consensus 186 ~~~~~~~~~yd~~t~~--W~~~~-~~p~~-r~~~~~~~~~~~lyv~GG 229 (429)
...++++|.++.+ |+.-. ..+.. ....+-++.++++|+-.+
T Consensus 124 ---dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~ 168 (571)
T 2ad6_A 124 ---NGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCS 168 (571)
T ss_dssp ---TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECB
T ss_pred ---CCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEec
Confidence 3578999998874 87532 21111 122233456888887643
No 170
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=90.96 E-value=2.5 Score=38.22 Aligned_cols=101 Identities=6% Similarity=0.012 Sum_probs=52.2
Q ss_pred CEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCCC
Q 014195 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (429)
Q Consensus 122 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 200 (429)
+.+++.|+.++ .+.+||..+........+... ...-.+++.. ++..++.|+. ...+..||..+.
T Consensus 54 g~~l~~~~~dg------~i~iw~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~~--------dg~v~iwd~~~~ 118 (368)
T 3mmy_A 54 GNFLIAGSWAN------DVRCWEVQDSGQTIPKAQQMH-TGPVLDVCWSDDGSKVFTASC--------DKTAKMWDLSSN 118 (368)
T ss_dssp SEEEEEEETTS------EEEEEEECTTSCEEEEEEEEC-SSCEEEEEECTTSSEEEEEET--------TSEEEEEETTTT
T ss_pred ceEEEEECCCC------cEEEEEcCCCCceeEEEeccc-cCCEEEEEECcCCCEEEEEcC--------CCcEEEEEcCCC
Confidence 47888887653 377888876433321111110 1112233333 5556666653 346888999888
Q ss_pred ceEeCCCCCCCCCCceEEE---ECCEEEEEeCCCCCCCCccccceEe
Q 014195 201 KWQDLPPLPVPRYAPATQL---WRGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 201 ~W~~~~~~p~~r~~~~~~~---~~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
+......... .-.++.. -++++++.|+.++ .+..|++
T Consensus 119 ~~~~~~~~~~--~v~~~~~~~~~~~~~l~~~~~dg-----~i~vwd~ 158 (368)
T 3mmy_A 119 QAIQIAQHDA--PVKTIHWIKAPNYSCVMTGSWDK-----TLKFWDT 158 (368)
T ss_dssp EEEEEEECSS--CEEEEEEEECSSCEEEEEEETTS-----EEEEECS
T ss_pred CceeeccccC--ceEEEEEEeCCCCCEEEEccCCC-----cEEEEEC
Confidence 7655422111 1112222 3567778877653 3555653
No 171
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=90.89 E-value=3.7 Score=36.55 Aligned_cols=86 Identities=10% Similarity=-0.055 Sum_probs=48.5
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 199 (429)
++.||++.-.. ..+++||+.+++-.... .+. + -.+++.. ++++|+.. ...+.+||+++
T Consensus 24 ~~~l~~~d~~~------~~i~~~d~~~~~~~~~~-~~~---~-~~~i~~~~dG~l~v~~----------~~~l~~~d~~~ 82 (297)
T 3g4e_A 24 SNSLLFVDIPA------KKVCRWDSFTKQVQRVT-MDA---P-VSSVALRQSGGYVATI----------GTKFCALNWKE 82 (297)
T ss_dssp TTEEEEEETTT------TEEEEEETTTCCEEEEE-CSS---C-EEEEEEBTTSSEEEEE----------TTEEEEEETTT
T ss_pred CCEEEEEECCC------CEEEEEECCCCcEEEEe-CCC---c-eEEEEECCCCCEEEEE----------CCeEEEEECCC
Confidence 46788876432 35899999988764432 222 1 1233333 55666642 24788999999
Q ss_pred CceEeCCCCCC--C--CCCceEEEECCEEEEE
Q 014195 200 KKWQDLPPLPV--P--RYAPATQLWRGRLHVM 227 (429)
Q Consensus 200 ~~W~~~~~~p~--~--r~~~~~~~~~~~lyv~ 227 (429)
.+++.+...+. + +....++.-++++|+.
T Consensus 83 g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~ 114 (297)
T 3g4e_A 83 QSAVVLATVDNDKKNNRFNDGKVDPAGRYFAG 114 (297)
T ss_dssp TEEEEEEECCTTCSSEEEEEEEECTTSCEEEE
T ss_pred CcEEEEEecCCCCCCCCCCCEEECCCCCEEEe
Confidence 98877653321 1 1211222236778774
No 172
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=90.85 E-value=6.5 Score=36.04 Aligned_cols=108 Identities=7% Similarity=-0.028 Sum_probs=53.6
Q ss_pred ccccccccCCCeEEccCCCCCccCCcEEEECCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccce-eeE-E
Q 014195 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSH-LGM-V 168 (429)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~-~~~-~ 168 (429)
.++.+|..+.+-..+...+..........-+++.+++...+ ..++++|+.+.+-..+...+. .... ... .
T Consensus 61 ~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~------~~l~~~d~~~g~~~~~~~~~~--~~~~~~~~~~ 132 (388)
T 3pe7_A 61 NYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG------RNLMRVDLATLEENVVYQVPA--EWVGYGTWVA 132 (388)
T ss_dssp EEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT------TEEEEEETTTCCEEEEEECCT--TEEEEEEEEE
T ss_pred eEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC------CeEEEEECCCCcceeeeechh--hcccccceeE
Confidence 35666777766666654433222122333355444444322 258999999987666554443 1111 111 1
Q ss_pred EeCCEEEEEeCeeCCC--------------CCCCCceeEEEeCCCCceEeCC
Q 014195 169 TDGRYIYVVTGQYGPQ--------------CRGPTAHTFVLDTETKKWQDLP 206 (429)
Q Consensus 169 ~~~~~lyv~GG~~~~~--------------~~~~~~~~~~yd~~t~~W~~~~ 206 (429)
..++++++.--..... .......++.+|+.+.+-..+.
T Consensus 133 ~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~ 184 (388)
T 3pe7_A 133 NSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL 184 (388)
T ss_dssp CTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE
T ss_pred CCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEee
Confidence 2234333321100000 0112468999999988766554
No 173
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=90.52 E-value=12 Score=35.38 Aligned_cols=62 Identities=11% Similarity=0.173 Sum_probs=32.2
Q ss_pred eEEe-C-CCCCeEEcCCCCCCCCCcceeEEEECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeE
Q 014195 310 VYML-D-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWH 376 (429)
Q Consensus 310 v~~~-d-~~~~W~~~~~~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~ 376 (429)
+|.. + ....+..+..+... .. -.+++...+.+++..+......... -.-.++.++.+++.|+
T Consensus 334 iw~~~~~~~~~l~~~~~~~~~-~~-v~~~~~~~~~~~v~~~~~~~~~~~~---~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 334 ILEMSEKQKGDLALKQIITFP-YN-VISLSAHNDEFQVTLDNKESSGVQK---NFAKFIEYNLNENSFV 397 (450)
T ss_dssp EEEECSSSTTCEEEEEEEECS-SC-EEEEEEETTEEEEEECCTTCCSSCC---CSEEEEEEETTTTEEE
T ss_pred EEEeccCCCCceeeccEeccC-Cc-eEEEEecCCcEEEEEecccCCCCCC---cceEEEEEEcCCCeEE
Confidence 5666 3 44556665544433 21 2344566677777765432211000 0116777788888886
No 174
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=90.43 E-value=7.2 Score=35.59 Aligned_cols=65 Identities=12% Similarity=0.080 Sum_probs=31.7
Q ss_pred EEEeCCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCC--CCCCCceEEE--ECCEEEEEeCCCCCCCCccccce
Q 014195 167 MVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLP--VPRYAPATQL--WRGRLHVMGGSGENRYTPEVDHW 242 (429)
Q Consensus 167 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p--~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~ 242 (429)
++...+..++.|+. ...+..||..+++-....... .-...-.++. -+++.++.|+.++ .+..|
T Consensus 88 ~~~s~d~~l~~~s~--------dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~-----~i~iw 154 (344)
T 4gqb_B 88 LTWVGERGILVASD--------SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI-----CIKVW 154 (344)
T ss_dssp EEEETTTEEEEEET--------TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS-----CEEEE
T ss_pred EEEeCCCeEEEEEC--------CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC-----eEEEE
Confidence 44444444556553 346778888776532211100 0011111222 2677778887653 46677
Q ss_pred Ee
Q 014195 243 SL 244 (429)
Q Consensus 243 ~~ 244 (429)
++
T Consensus 155 d~ 156 (344)
T 4gqb_B 155 DL 156 (344)
T ss_dssp ET
T ss_pred EC
Confidence 63
No 175
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=90.28 E-value=16 Score=36.46 Aligned_cols=99 Identities=13% Similarity=0.194 Sum_probs=56.4
Q ss_pred CcEEEECCEEEEEeccCCCCceeeeEEEEEC-CCCc--eeeCCCCCCCC---c---cceeeEEE--eCCE----EEEEeC
Q 014195 115 GAAIQIKNLLYVFAGYGSIDYVHSHVDIYNF-TDNT--WGGRFDMPREM---A---HSHLGMVT--DGRY----IYVVTG 179 (429)
Q Consensus 115 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~-~~~~--W~~~~~~~~~~---~---r~~~~~~~--~~~~----lyv~GG 179 (429)
.+-++.++.||+....+ ..++++|. .+.+ |+.-...+... . ....+.++ .+++ ||+...
T Consensus 56 ~tP~v~~g~vyv~~~~~------~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~ 129 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSFP------NNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL 129 (599)
T ss_dssp SCCEEETTEEEEECSTT------TCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT
T ss_pred eccEEECCEEEEEeCCC------CEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC
Confidence 44566799999986521 24889998 7664 87644332100 0 11223455 6777 887532
Q ss_pred eeCCCCCCCCceeEEEeCCCCc--eEeCCCCCCC--CCCceEEEECCEEEEEe
Q 014195 180 QYGPQCRGPTAHTFVLDTETKK--WQDLPPLPVP--RYAPATQLWRGRLHVMG 228 (429)
Q Consensus 180 ~~~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~--r~~~~~~~~~~~lyv~G 228 (429)
...++++|.+|.+ |+.-..-+.. ....+-++.+++||+-.
T Consensus 130 ---------dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~ 173 (599)
T 1w6s_A 130 ---------DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGS 173 (599)
T ss_dssp ---------TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECC
T ss_pred ---------CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEe
Confidence 3578899998875 8753211111 11223345688887654
No 176
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=89.99 E-value=3.3 Score=40.76 Aligned_cols=63 Identities=16% Similarity=0.144 Sum_probs=37.2
Q ss_pred ECCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe--CCEEEEEeCeeCCCCCCCCceeEEEeC
Q 014195 120 IKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (429)
Q Consensus 120 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~ 197 (429)
.++++|+.+..+ ..+.++|..+.+-... ++.... -|++++. +..||+.+. ...+..||+
T Consensus 147 p~~~~~vs~~~d------~~V~v~D~~t~~~~~~--i~~g~~--~~~v~~spdg~~l~v~~~---------d~~V~v~D~ 207 (543)
T 1nir_A 147 LPNLFSVTLRDA------GQIALVDGDSKKIVKV--IDTGYA--VHISRMSASGRYLLVIGR---------DARIDMIDL 207 (543)
T ss_dssp GGGEEEEEEGGG------TEEEEEETTTCCEEEE--EECSTT--EEEEEECTTSCEEEEEET---------TSEEEEEET
T ss_pred CCCEEEEEEcCC------CeEEEEECCCceEEEE--EecCcc--cceEEECCCCCEEEEECC---------CCeEEEEEC
Confidence 367888887543 3478899988865432 221111 3444443 456776643 257889999
Q ss_pred --CCCc
Q 014195 198 --ETKK 201 (429)
Q Consensus 198 --~t~~ 201 (429)
.+.+
T Consensus 208 ~~~t~~ 213 (543)
T 1nir_A 208 WAKEPT 213 (543)
T ss_dssp TSSSCE
T ss_pred cCCCCc
Confidence 5544
No 177
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=89.95 E-value=12 Score=34.71 Aligned_cols=60 Identities=17% Similarity=0.203 Sum_probs=35.3
Q ss_pred EEEEECCC--CceeeCCCCCCCCccceeeEEEe---CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCC
Q 014195 140 VDIYNFTD--NTWGGRFDMPREMAHSHLGMVTD---GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP 206 (429)
Q Consensus 140 ~~~yd~~~--~~W~~~~~~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~ 206 (429)
+.+++... .+|+.+.+... ...-++++.. .+.||+.+.. +.. -..+++.+....+|+.+.
T Consensus 33 l~~~~~~~~g~~W~~~~~~~~--~~~v~~i~~dp~~~~~l~~g~~~-g~~----g~gl~~s~D~G~tW~~~~ 97 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGPVFL--GHTIHHIVQDPREPERMLMAART-GHL----GPTVFRSDDGGGNWTEAT 97 (394)
T ss_dssp EEEEEECTTSCSEEEEEEEST--TSEEEEEEECSSSTTCEEEEEEC---C----CEEEEEESSTTSCCEECS
T ss_pred eEEEECCCCCCCceECCccCC--CCceEEEEECCCCCCeEEEEecC-CCC----CccEEEeCCCCCCceECC
Confidence 56777655 78987642111 1233455554 5678876531 110 125778877788999986
No 178
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=89.70 E-value=10 Score=33.39 Aligned_cols=170 Identities=9% Similarity=-0.059 Sum_probs=79.8
Q ss_pred ceeeeecCCCcccceeeeeeecCCCCe--EEecCCCCCCCcceeeeecC-CCCcCcccccccccccccCC-CeEEccCCC
Q 014195 34 DFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTKK-DVVPKRILPATFQDLPAPEL-KWEKMKAAP 109 (429)
Q Consensus 34 ~~ly~~GG~~~~~~~~~~~~yd~~~~~--~~~p~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~-~W~~~~~~p 109 (429)
+.++++|..++ .+..+|+++.+ ..++.......+.+...... ...+ ....+..+|+... .|+.-. +
T Consensus 5 ~~~lv~~~~~~-----~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs---~~~~V~~~d~~G~~~W~~~~--~ 74 (276)
T 3no2_A 5 QHLLVGGSGWN-----KIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS---YSKGAKMITRDGRELWNIAA--P 74 (276)
T ss_dssp CEEEEECTTCS-----EEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE---CBSEEEEECTTSCEEEEEEC--C
T ss_pred CcEEEeeCCCC-----EEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe---CCCCEEEECCCCCEEEEEcC--C
Confidence 45666666554 67789998888 55554221111222222222 1111 2345778888322 465433 1
Q ss_pred CCccCCcEEEE-CCEEEEEeccCCCCceeeeEEEEECCCCc-eeeC--CCCCCCCccceeeEEEeCCEEEEEeCeeCCCC
Q 014195 110 VPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNT-WGGR--FDMPREMAHSHLGMVTDGRYIYVVTGQYGPQC 185 (429)
Q Consensus 110 ~~R~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~--~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~ 185 (429)
.....+++..+ ++.+++....+ ...++.+|+..+. |+.- ...+.+...........++.+++....
T Consensus 75 ~~~~~~~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~----- 144 (276)
T 3no2_A 75 AGCEMQTARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA----- 144 (276)
T ss_dssp TTCEEEEEEECTTSCEEEEEEST-----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT-----
T ss_pred CCccccccEECCCCCEEEEecCC-----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC-----
Confidence 11112233333 56666654321 1247788885442 4321 111111111222233445556655321
Q ss_pred CCCCceeEEEeCCCC-ceEeCCCCCCCCCCceEEEE-CCEEEEEeCC
Q 014195 186 RGPTAHTFVLDTETK-KWQDLPPLPVPRYAPATQLW-RGRLHVMGGS 230 (429)
Q Consensus 186 ~~~~~~~~~yd~~t~-~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~ 230 (429)
...+.+||++-+ .|+.-.+ ...+++... ++.+++.+..
T Consensus 145 ---~~~v~~~d~~G~~~w~~~~~----~~~~~~~~~~~g~~~v~~~~ 184 (276)
T 3no2_A 145 ---TSEVREIAPNGQLLNSVKLS----GTPFSSAFLDNGDCLVACGD 184 (276)
T ss_dssp ---TTEEEEECTTSCEEEEEECS----SCCCEEEECTTSCEEEECBT
T ss_pred ---CCEEEEECCCCCEEEEEECC----CCccceeEcCCCCEEEEeCC
Confidence 457889998833 3665432 112334433 6778877653
No 179
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=89.60 E-value=2.6 Score=37.53 Aligned_cols=215 Identities=9% Similarity=0.081 Sum_probs=98.4
Q ss_pred cceeeeecCCCcccceeeeeeecCCCCe-EEecCCCCCCCcceeeeecC-CCCcCcccccccccccccCCCeEEccCCCC
Q 014195 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-IILPNNGPQKGENIGVKTKK-DVVPKRILPATFQDLPAPELKWEKMKAAPV 110 (429)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~yd~~~~~-~~~p~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 110 (429)
++.||++.-.. ..+.+||+.+.. ....... .-.+++..... ...+ ....+..+|+.+.+++.+...+.
T Consensus 24 ~~~l~~~d~~~-----~~i~~~d~~~~~~~~~~~~~--~~~~i~~~~dG~l~v~---~~~~l~~~d~~~g~~~~~~~~~~ 93 (297)
T 3g4e_A 24 SNSLLFVDIPA-----KKVCRWDSFTKQVQRVTMDA--PVSSVALRQSGGYVAT---IGTKFCALNWKEQSAVVLATVDN 93 (297)
T ss_dssp TTEEEEEETTT-----TEEEEEETTTCCEEEEECSS--CEEEEEEBTTSSEEEE---ETTEEEEEETTTTEEEEEEECCT
T ss_pred CCEEEEEECCC-----CEEEEEECCCCcEEEEeCCC--ceEEEEECCCCCEEEE---ECCeEEEEECCCCcEEEEEecCC
Confidence 34566655432 367899998877 3332211 00111111111 1111 13457788888887776654432
Q ss_pred ----CccCCcEEEECCEEEEEeccCCC-----CceeeeEEEEECCCCceeeC-CCCCCCCccceeeEEEe--CCEEEEEe
Q 014195 111 ----PRLDGAAIQIKNLLYVFAGYGSI-----DYVHSHVDIYNFTDNTWGGR-FDMPREMAHSHLGMVTD--GRYIYVVT 178 (429)
Q Consensus 111 ----~R~~~~~~~~~~~iyv~GG~~~~-----~~~~~~~~~yd~~~~~W~~~-~~~~~~~~r~~~~~~~~--~~~lyv~G 178 (429)
.|....++.-++.+|+..-.... ......++++|+.. +...+ ..+.. ..++++. +..||+..
T Consensus 94 ~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~~-----pngi~~spdg~~lyv~~ 167 (297)
T 3g4e_A 94 DKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVDI-----SNGLDWSLDHKIFYYID 167 (297)
T ss_dssp TCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEESB-----EEEEEECTTSCEEEEEE
T ss_pred CCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeecccc-----ccceEEcCCCCEEEEec
Confidence 12111222225677774321111 01124588898753 33332 11211 2334443 44688874
Q ss_pred CeeCCCCCCCCceeEEEeC--CCCceEe---CCCCCCC-CCCceEEE-ECCEEEEEeCCCCCCCCccccceEeeeecCCc
Q 014195 179 GQYGPQCRGPTAHTFVLDT--ETKKWQD---LPPLPVP-RYAPATQL-WRGRLHVMGGSGENRYTPEVDHWSLAVKDGKP 251 (429)
Q Consensus 179 G~~~~~~~~~~~~~~~yd~--~t~~W~~---~~~~p~~-r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~ 251 (429)
.. ...+++||. .+.+... +..++.. ..-..++. -++.||+..-.. ..+.+| |+
T Consensus 168 ~~--------~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~-----~~v~~~-------d~ 227 (297)
T 3g4e_A 168 SL--------SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG-----GRVIRL-------DP 227 (297)
T ss_dssp GG--------GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT-----TEEEEE-------CT
T ss_pred CC--------CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC-----CEEEEE-------cC
Confidence 32 356788875 4554321 1112211 11122332 367888875321 112223 36
Q ss_pred cccceeeccCCCCCCCceeEEEeC----CEEEEEcccC
Q 014195 252 LEKEWRTEIPIPRGGPHRACVVVD----DRLLVIGGQE 285 (429)
Q Consensus 252 ~~~~W~~~~~~p~~~~~~~~~~~~----~~iyv~GG~~ 285 (429)
.+.+....-++|.... .++.++ +.|||.....
T Consensus 228 ~tG~~~~~i~~p~~~~--t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 228 VTGKRLQTVKLPVDKT--TSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp TTCCEEEEEECSSSBE--EEEEEESGGGCEEEEEEBCT
T ss_pred CCceEEEEEECCCCCc--eEEEEeCCCCCEEEEEcCCc
Confidence 6555444444453332 444443 4788877543
No 180
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=89.40 E-value=9.1 Score=33.63 Aligned_cols=82 Identities=10% Similarity=0.021 Sum_probs=44.3
Q ss_pred eEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceE
Q 014195 139 HVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPAT 217 (429)
Q Consensus 139 ~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~ 217 (429)
.+.++|..+++..++-.+... ...-.+++.. +++.++.|+.+ ..+..||..+.+-...-... ......
T Consensus 46 tV~iWd~~tg~~~~~~~~~~~-~~~V~~v~~~~~~~~l~sgs~D--------g~v~iw~~~~~~~~~~~~~h--~~~~~~ 114 (318)
T 4ggc_A 46 SVYLWSASSGDILQLLQMEQP-GEYISSVAWIKEGNYLAVGTSS--------AEVQLWDVQQQKRLRNMTSH--SARVGS 114 (318)
T ss_dssp EEEEEETTTCCEEEEEECCST-TCCEEEEEECTTSSEEEEEETT--------SEEEEEETTTTEEEEEEECC--SSCEEE
T ss_pred EEEEEECCCCCEEEEEEecCC-CCeEEEEEECCCCCEEEEEECC--------CcEEEeecCCceeEEEecCc--cceEEE
Confidence 588999999887654333331 1112233332 55677777643 46778888887643322111 112233
Q ss_pred EEECCEEEEEeCCC
Q 014195 218 QLWRGRLHVMGGSG 231 (429)
Q Consensus 218 ~~~~~~lyv~GG~~ 231 (429)
....+++.+.|+.+
T Consensus 115 ~~~~~~~l~s~~~~ 128 (318)
T 4ggc_A 115 LSWNSYILSSGSRS 128 (318)
T ss_dssp EEEETTEEEEEETT
T ss_pred eecCCCEEEEEecC
Confidence 44455666666654
No 181
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=89.33 E-value=19 Score=35.94 Aligned_cols=203 Identities=10% Similarity=-0.091 Sum_probs=94.5
Q ss_pred eEEEEECC--C-CceeeCCCCCCC--CccceeeEEE-eCCEEEEEeCeeCC--CCCCCCceeEEEeCCC------CceEe
Q 014195 139 HVDIYNFT--D-NTWGGRFDMPRE--MAHSHLGMVT-DGRYIYVVTGQYGP--QCRGPTAHTFVLDTET------KKWQD 204 (429)
Q Consensus 139 ~~~~yd~~--~-~~W~~~~~~~~~--~~r~~~~~~~-~~~~lyv~GG~~~~--~~~~~~~~~~~yd~~t------~~W~~ 204 (429)
.+|.+|.. + ..-..+...+.. ..+. ..++. -+++.+++...+.. ........++.+|..+ .+.+.
T Consensus 103 ~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~-~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 181 (662)
T 3azo_A 103 RLYAFEPDAPGGAVPRPLTPVSAVGGGLRW-ADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRE 181 (662)
T ss_dssp CEEEECTTSTTCCCCEECSCCCCSTTCEEE-EEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEE
T ss_pred eEEEEcCCCCCCCCCEeccCCccCCCCccc-cCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeE
Confidence 48889887 4 666666554310 0122 22222 24444444433311 0001146899999988 66666
Q ss_pred CC-CCCCCCCCceEEEECCEEEEEeCCCCCCC-CccccceEeeeecCCcc-cc---ceeeccCCCCCCCceeEEEeCCEE
Q 014195 205 LP-PLPVPRYAPATQLWRGRLHVMGGSGENRY-TPEVDHWSLAVKDGKPL-EK---EWRTEIPIPRGGPHRACVVVDDRL 278 (429)
Q Consensus 205 ~~-~~p~~r~~~~~~~~~~~lyv~GG~~~~~~-~~~~~~~~~~~~~~d~~-~~---~W~~~~~~p~~~~~~~~~~~~~~i 278 (429)
+. .-+. ........-+++..++...+.... -...+.|.++ .. +. ..+.+..-........+..-+++|
T Consensus 182 l~~~~~~-~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d-----~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l 255 (662)
T 3azo_A 182 LSDDAHR-FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTAR-----VTEDGRFADTRTLLGGPEEAIAQAEWAPDGSL 255 (662)
T ss_dssp SSCSCSS-EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEE-----ECTTSCEEEEEEEEEETTBCEEEEEECTTSCE
T ss_pred EEecCCC-cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEE-----ECCCCcccccEEeCCCCCceEcceEECCCCeE
Confidence 65 3221 111112233555444433221110 0112333322 33 23 233322211111111122237777
Q ss_pred EEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCCCCCCCC----Cc-ceeEEE-ECCEEEEEcccCC
Q 014195 279 LVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDS----HI-EFAWVL-VNNSIVIVGGTTE 351 (429)
Q Consensus 279 yv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~~~~r~----~~-~~~~~~-~~~~i~v~GG~~~ 351 (429)
|+.+..++. ..+|.+| .+.+++.+........ .. ...++. .++++++.+.. .
T Consensus 256 ~~~~~~~~~--------------------~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~ 314 (662)
T 3azo_A 256 IVATDRTGW--------------------WNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-G 314 (662)
T ss_dssp EEEECTTSS--------------------CEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-S
T ss_pred EEEECCCCC--------------------eEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-C
Confidence 766654321 2489998 6888888765321110 00 011233 36777777655 3
Q ss_pred CCCCccceeeeCcEEEEecCCCCeEEec
Q 014195 352 KHPTTKKMVLVGEIFQFNLNTLKWHVIG 379 (429)
Q Consensus 352 ~~~~~~~~~~~~~i~~yd~~~~~W~~v~ 379 (429)
. ..+|.+|.++...+.+.
T Consensus 315 ~----------~~l~~~d~~~~~~~~l~ 332 (662)
T 3azo_A 315 A----------AVLGILDPESGELVDAA 332 (662)
T ss_dssp S----------CEEEEEETTTTEEEECC
T ss_pred c----------cEEEEEECCCCcEEEec
Confidence 2 27888999887776653
No 182
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=89.22 E-value=5.1 Score=39.13 Aligned_cols=54 Identities=7% Similarity=-0.041 Sum_probs=27.6
Q ss_pred EECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEEecccCcceeeeeeEEECCEEEEEcccC
Q 014195 338 LVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIGKLPYRVKTTLAGYWNGWLYFTSGQR 404 (429)
Q Consensus 338 ~~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v~~lp~~r~~~~~~~~~~~i~v~GG~~ 404 (429)
..++++++.|+.+. .|.+||.....-..+..-. ..-...+...+++.++.||.+
T Consensus 517 s~dg~~l~s~~~dg------------~v~lwd~~~~~~~~~~~h~-~~v~~~~fs~dg~~l~s~~~D 570 (577)
T 2ymu_A 517 SPDGQTIASASDDK------------TVKLWNRNGQLLQTLTGHS-SSVWGVAFSPDGQTIASASSD 570 (577)
T ss_dssp CTTSSCEEEEETTS------------EEEEECTTSCEEEEEECCS-SCEEEEEECTTSSCEEEEETT
T ss_pred cCCCCEEEEEECcC------------EEEEEeCCCCEEEEEcCCC-CCEEEEEEcCCCCEEEEEeCC
Confidence 34677777777542 5777886544333221111 111112233467777777754
No 183
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=89.18 E-value=21 Score=36.25 Aligned_cols=98 Identities=15% Similarity=0.179 Sum_probs=58.5
Q ss_pred CcEEEECCEEEEEeccCCCCceeeeEEEEECCCCc--eeeCCCCCCCC------ccceeeEEEeCCEEEEEeCeeCCCCC
Q 014195 115 GAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREM------AHSHLGMVTDGRYIYVVTGQYGPQCR 186 (429)
Q Consensus 115 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~------~r~~~~~~~~~~~lyv~GG~~~~~~~ 186 (429)
.+-++.++.||+.... ..++++|..+.+ |+.-...+... .....+.++.+++||+...
T Consensus 64 ~~P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~------- 129 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGPF-------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL------- 129 (689)
T ss_dssp CCCEEETTEEEEECGG-------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------
T ss_pred ecCEEECCEEEEEcCC-------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-------
Confidence 3445679999997642 348899988775 87643332100 0012345667898887642
Q ss_pred CCCceeEEEeCCCCc--eEeCCC-CCC--CCCCceEEEECCEEEEEe
Q 014195 187 GPTAHTFVLDTETKK--WQDLPP-LPV--PRYAPATQLWRGRLHVMG 228 (429)
Q Consensus 187 ~~~~~~~~yd~~t~~--W~~~~~-~p~--~r~~~~~~~~~~~lyv~G 228 (429)
...++.+|.+|.+ |+.-.. -+. .....+-++.++++|+-.
T Consensus 130 --dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~ 174 (689)
T 1yiq_A 130 --DGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGN 174 (689)
T ss_dssp --TSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECC
T ss_pred --CCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEe
Confidence 3578899998775 876442 111 122233456788888743
No 184
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=88.73 E-value=20 Score=36.36 Aligned_cols=134 Identities=10% Similarity=0.039 Sum_probs=62.6
Q ss_pred eeEEEEECCCCcee--eCCCCCCCCccceeeEEE-eCCEEEEEeCeeCCCCCCCCceeEEEeCCC------C--ceEeCC
Q 014195 138 SHVDIYNFTDNTWG--GRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTET------K--KWQDLP 206 (429)
Q Consensus 138 ~~~~~yd~~~~~W~--~~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t------~--~W~~~~ 206 (429)
..+++++..+.+.+ .+...+.. +....++.. -+++..++....+.. ..++++.+|..+ . .+..+.
T Consensus 208 ~~v~~~~l~t~~~~~~~v~~~~~~-~~~~~~~~~SpDg~~l~~~~~~~~~---~~~~l~~~d~~~~~~~~~~~~~~~~l~ 283 (710)
T 2xdw_A 208 QKLYYHVLGTDQSEDILCAEFPDE-PKWMGGAELSDDGRYVLLSIREGCD---PVNRLWYCDLQQESNGITGILKWVKLI 283 (710)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTC-TTCEEEEEECTTSCEEEEEEECSSS---SCCEEEEEEGGGSSSSSCSSCCCEEEE
T ss_pred CEEEEEECCCCcccceEEeccCCC-CeEEEEEEEcCCCCEEEEEEEccCC---CccEEEEEECcccccccCCccceEEee
Confidence 45899999887643 22222210 122222322 244433333322211 146899999876 4 577664
Q ss_pred CCCCCCCCceEEEECCEEEEEeCCCCCCCCccccceEeeeecCCccc---cceeeccCCCCCCCceeEEEe-CCEEEEEc
Q 014195 207 PLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLE---KEWRTEIPIPRGGPHRACVVV-DDRLLVIG 282 (429)
Q Consensus 207 ~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~---~~W~~~~~~p~~~~~~~~~~~-~~~iyv~G 282 (429)
.-.... ......-+++||+.+..+.. ....|... ..+ ..|+.+.+-.....-..+... ++.|++..
T Consensus 284 ~~~~~~-~~~~s~dg~~l~~~s~~~~~----~~~l~~~d-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~ 353 (710)
T 2xdw_A 284 DNFEGE-YDYVTNEGTVFTFKTNRHSP----NYRLINID-----FTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCY 353 (710)
T ss_dssp CSSSSC-EEEEEEETTEEEEEECTTCT----TCEEEEEE-----TTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEE
T ss_pred CCCCcE-EEEEeccCCEEEEEECCCCC----CCEEEEEe-----CCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEE
Confidence 322211 11223346788888654321 12222221 222 258776443221111233444 77777776
Q ss_pred ccC
Q 014195 283 GQE 285 (429)
Q Consensus 283 G~~ 285 (429)
..+
T Consensus 354 ~~~ 356 (710)
T 2xdw_A 354 LHD 356 (710)
T ss_dssp EET
T ss_pred EEC
Confidence 544
No 185
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=88.60 E-value=4.6 Score=35.96 Aligned_cols=76 Identities=13% Similarity=0.174 Sum_probs=38.0
Q ss_pred EEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCC--ccceeeEEEe--CCEEEEEeCeeCCCCCC---CCceeEEE
Q 014195 123 LLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREM--AHSHLGMVTD--GRYIYVVTGQYGPQCRG---PTAHTFVL 195 (429)
Q Consensus 123 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~--~r~~~~~~~~--~~~lyv~GG~~~~~~~~---~~~~~~~y 195 (429)
.+|+.+..+ ..++++|+.+.+-...-+.+.+. ...-..+++. ++.||+.....+..... ....+.+|
T Consensus 47 ~l~v~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~ 120 (337)
T 1pby_B 47 IAYATVNKS------ESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALY 120 (337)
T ss_dssp EEEEEETTT------TEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEE
T ss_pred EEEEEeCCC------CeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEE
Confidence 677776432 35899999887654321221100 0011223332 44777764211000000 13689999
Q ss_pred eCCCCceEe
Q 014195 196 DTETKKWQD 204 (429)
Q Consensus 196 d~~t~~W~~ 204 (429)
|+.+.+...
T Consensus 121 d~~~~~~~~ 129 (337)
T 1pby_B 121 DAETLSRRK 129 (337)
T ss_dssp ETTTTEEEE
T ss_pred ECCCCcEEE
Confidence 998876543
No 186
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=88.58 E-value=12 Score=32.63 Aligned_cols=56 Identities=14% Similarity=0.138 Sum_probs=29.9
Q ss_pred eEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCC---CC-CCCceEEE--ECCEEEEEeC
Q 014195 166 GMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLP---VP-RYAPATQL--WRGRLHVMGG 229 (429)
Q Consensus 166 ~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p---~~-r~~~~~~~--~~~~lyv~GG 229 (429)
++++. ++.+|+.... ...+.+||+.......+.... .. ..-..++. -+++||+.+.
T Consensus 34 ~v~~~~~g~l~v~~~~--------~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~ 96 (286)
T 1q7f_A 34 GVAVNAQNDIIVADTN--------NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTER 96 (286)
T ss_dssp EEEECTTCCEEEEEGG--------GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEEC
T ss_pred eEEECCCCCEEEEECC--------CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcC
Confidence 34443 5678887532 346888998765444433211 11 12233344 2688998864
No 187
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=88.46 E-value=11 Score=38.14 Aligned_cols=103 Identities=16% Similarity=0.002 Sum_probs=48.4
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEeC-C--EEEEEeCeeCCCCCCCCceeEEEeC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDG-R--YIYVVTGQYGPQCRGPTAHTFVLDT 197 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~-~--~lyv~GG~~~~~~~~~~~~~~~yd~ 197 (429)
++..++.|+.++ .+.++|.....-..+..........-.+++... + .+++.|+. ...+.+||.
T Consensus 483 ~~~~l~s~s~D~------~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~--------d~~v~vwd~ 548 (694)
T 3dm0_A 483 DNRQIVSASRDR------TIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASW--------DKTVKVWNL 548 (694)
T ss_dssp TSSCEEEEETTS------CEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEET--------TSCEEEEET
T ss_pred CCCEEEEEeCCC------EEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeC--------CCeEEEEEC
Confidence 456667777654 367777654432222111111011112233322 1 35666654 245778888
Q ss_pred CCCceEeCCCCCCCCCCceEEE--ECCEEEEEeCCCCCCCCccccceEe
Q 014195 198 ETKKWQDLPPLPVPRYAPATQL--WRGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 198 ~t~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
.+.+-... +......-..+. -++++++.|+.++ .+..|++
T Consensus 549 ~~~~~~~~--~~~h~~~v~~v~~spdg~~l~sg~~Dg-----~i~iwd~ 590 (694)
T 3dm0_A 549 SNCKLRST--LAGHTGYVSTVAVSPDGSLCASGGKDG-----VVLLWDL 590 (694)
T ss_dssp TTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS-----BCEEEET
T ss_pred CCCcEEEE--EcCCCCCEEEEEEeCCCCEEEEEeCCC-----eEEEEEC
Confidence 77654322 111111112222 2677888887653 4667764
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=88.42 E-value=19 Score=36.38 Aligned_cols=182 Identities=10% Similarity=0.072 Sum_probs=82.8
Q ss_pred ccccccccCCCeEEccCCCCCccCCcEEEECCEEEEEeccCCCC-------ceeeeEEEEECCCCcee--eCCCCCCCCc
Q 014195 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSID-------YVHSHVDIYNFTDNTWG--GRFDMPREMA 161 (429)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~-------~~~~~~~~yd~~~~~W~--~~~~~~~~~~ 161 (429)
.+..+|..+++......++..+....+..-+++.++++..+... .....+++++..+.+-+ .+...+.. +
T Consensus 148 ~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~-~ 226 (695)
T 2bkl_A 148 VLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGD-P 226 (695)
T ss_dssp EEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCC-T
T ss_pred EEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCC-C
Confidence 45666777666431112222221222222356666666554321 12345999999887632 33222221 1
Q ss_pred cceeeEEE-eCCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEEECCEEEEEeCCCCCCCCcccc
Q 014195 162 HSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVD 240 (429)
Q Consensus 162 r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~ 240 (429)
....+... -+++..++...+.. ..++++.+|..+..|..+..-... ....+..++++|+....+.. ...+-
T Consensus 227 ~~~~~~~~SpDG~~l~~~~~~~~----~~~~l~~~~~~~~~~~~l~~~~~~--~~~~~~~~g~l~~~s~~~~~--~~~l~ 298 (695)
T 2bkl_A 227 TTFLQSDLSRDGKYLFVYILRGW----SENDVYWKRPGEKDFRLLVKGVGA--KYEVHAWKDRFYVLTDEGAP--RQRVF 298 (695)
T ss_dssp TCEEEEEECTTSCCEEEEEEETT----TEEEEEEECTTCSSCEEEEECSSC--CEEEEEETTEEEEEECTTCT--TCEEE
T ss_pred EEEEEEEECCCCCEEEEEEeCCC----CceEEEEEcCCCCceEEeecCCCc--eEEEEecCCcEEEEECCCCC--CCEEE
Confidence 22223332 24444444443331 156888888877788877532211 12223356666665433211 11122
Q ss_pred ceEeeeecCCccccceeeccCCCCCCCceeEEEeCCEEEEEcccC
Q 014195 241 HWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQE 285 (429)
Q Consensus 241 ~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~ 285 (429)
.|++. .+....|+.+.+......-..+...+++|++....+
T Consensus 299 ~~d~~----~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~d 339 (695)
T 2bkl_A 299 EVDPA----KPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKD 339 (695)
T ss_dssp EEBTT----BCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEET
T ss_pred EEeCC----CCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEEC
Confidence 22211 011223777644321111123344588888877654
No 189
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=88.32 E-value=9.9 Score=35.18 Aligned_cols=60 Identities=15% Similarity=0.080 Sum_probs=30.4
Q ss_pred CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEE-ECCEEEEEeCCCCCCCCccccceEe
Q 014195 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQL-WRGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 171 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
+++.++.|+.+ ..+..||..+.+-...-.-.. ..-.+++. -+++.++.|+.+ ..+..|++
T Consensus 134 dg~~l~s~~~d--------~~i~iwd~~~~~~~~~~~~h~-~~v~~~~~~p~~~~l~s~s~d-----~~v~iwd~ 194 (393)
T 1erj_A 134 DGKFLATGAED--------RLIRIWDIENRKIVMILQGHE-QDIYSLDYFPSGDKLVSGSGD-----RTVRIWDL 194 (393)
T ss_dssp TSSEEEEEETT--------SCEEEEETTTTEEEEEECCCS-SCEEEEEECTTSSEEEEEETT-----SEEEEEET
T ss_pred CCCEEEEEcCC--------CeEEEEECCCCcEEEEEccCC-CCEEEEEEcCCCCEEEEecCC-----CcEEEEEC
Confidence 56667777642 467788988775433211111 11111222 145566666654 34666763
No 190
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=88.26 E-value=14 Score=33.22 Aligned_cols=61 Identities=8% Similarity=-0.046 Sum_probs=34.2
Q ss_pred CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEE-ECCEEEEEeCCCCCCCCccccceEe
Q 014195 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQL-WRGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 171 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
++.+++.|+. ...+..||..+.+-..+........-.+++. -++.+++.|+.++ .+..|++
T Consensus 138 ~~~~l~s~s~--------dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg-----~i~iwd~ 199 (343)
T 3lrv_A 138 NTEYFIWADN--------RGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDG-----ILDVYNL 199 (343)
T ss_dssp -CCEEEEEET--------TCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTS-----CEEEEES
T ss_pred CCCEEEEEeC--------CCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCC-----EEEEEEC
Confidence 4556776764 3467788988876644322222212222322 3677888887653 4677774
No 191
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.25 E-value=15 Score=33.47 Aligned_cols=83 Identities=12% Similarity=0.117 Sum_probs=41.9
Q ss_pred ceEEeC-CCCCeEEcCCCCCCCCCcceeEEEECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEEecccCcceee
Q 014195 309 DVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIGKLPYRVKT 387 (429)
Q Consensus 309 ~v~~~d-~~~~W~~~~~~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v~~lp~~r~~ 387 (429)
.++.+| ....+..+.. ..+...........+++.+++........ ...++++|+.+.+.+.+..++.. .
T Consensus 217 ~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~-------~~~l~~~d~~~g~~~~l~~~~~~--~ 286 (396)
T 3c5m_A 217 RMWLVNEDGSNVRKIKE-HAEGESCTHEFWIPDGSAMAYVSYFKGQT-------DRVIYKANPETLENEEVMVMPPC--S 286 (396)
T ss_dssp CCEEEETTSCCCEESSC-CCTTEEEEEEEECTTSSCEEEEEEETTTC-------CEEEEEECTTTCCEEEEEECCSE--E
T ss_pred eEEEEECCCCceeEeec-cCCCccccceEECCCCCEEEEEecCCCCc-------cceEEEEECCCCCeEEeeeCCCC--C
Confidence 578888 6777777654 21111111112233565444443322111 12499999998887776544421 1
Q ss_pred eeeEEE-CCEEEEEcc
Q 014195 388 TLAGYW-NGWLYFTSG 402 (429)
Q Consensus 388 ~~~~~~-~~~i~v~GG 402 (429)
..... +++++++.+
T Consensus 287 -~~~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 287 -HLMSNFDGSLMVGDG 301 (396)
T ss_dssp -EEEECSSSSEEEEEE
T ss_pred -CCccCCCCceEEEec
Confidence 22223 666665544
No 192
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=87.64 E-value=11 Score=33.55 Aligned_cols=87 Identities=15% Similarity=0.213 Sum_probs=44.9
Q ss_pred EEECCEEEEEeccCCCCceeeeEEEEECC-CCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEE
Q 014195 118 IQIKNLLYVFAGYGSIDYVHSHVDIYNFT-DNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVL 195 (429)
Q Consensus 118 ~~~~~~iyv~GG~~~~~~~~~~~~~yd~~-~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~y 195 (429)
+..++.||+... + ..+++||+. ...|....+.+ ...+.+.. ++.||+... ...+++|
T Consensus 104 ~~~~~~l~v~t~-~------~~l~~~d~~g~~~~~~~~~~~-----~~~~~~~~~~g~l~vgt~---------~~~l~~~ 162 (330)
T 3hxj_A 104 TIFEDILYVTSM-D------GHLYAINTDGTEKWRFKTKKA-----IYATPIVSEDGTIYVGSN---------DNYLYAI 162 (330)
T ss_dssp EEETTEEEEECT-T------SEEEEECTTSCEEEEEECSSC-----CCSCCEECTTSCEEEECT---------TSEEEEE
T ss_pred eEECCEEEEEec-C------CEEEEEcCCCCEEEEEcCCCc-----eeeeeEEcCCCEEEEEcC---------CCEEEEE
Confidence 344888887432 1 248889988 33465432211 11223344 677776421 2578889
Q ss_pred eCCCC-ceEeCCCCCCCCCCceEEE-ECCEEEEEe
Q 014195 196 DTETK-KWQDLPPLPVPRYAPATQL-WRGRLHVMG 228 (429)
Q Consensus 196 d~~t~-~W~~~~~~p~~r~~~~~~~-~~~~lyv~G 228 (429)
|+... .|....+ .... .+.+. .++.||+..
T Consensus 163 d~~g~~~~~~~~~--~~~~-~~~~~d~~g~l~v~t 194 (330)
T 3hxj_A 163 NPDGTEKWRFKTN--DAIT-SAASIGKDGTIYFGS 194 (330)
T ss_dssp CTTSCEEEEEECS--SCCC-SCCEECTTCCEEEES
T ss_pred CCCCCEeEEEecC--CCce-eeeEEcCCCEEEEEe
Confidence 98822 3655322 2222 22333 367777654
No 193
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=87.51 E-value=15 Score=32.68 Aligned_cols=154 Identities=8% Similarity=-0.032 Sum_probs=69.4
Q ss_pred hcceeeeecCCCcccceeeeeeecCCCCe--EEecCCCCCCCcceeeeecC-CCCcCcccccccccccccCCCeEEccCC
Q 014195 32 VADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTKK-DVVPKRILPATFQDLPAPELKWEKMKAA 108 (429)
Q Consensus 32 ~~~~ly~~GG~~~~~~~~~~~~yd~~~~~--~~~p~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 108 (429)
.++.+|+.++.++ .+..||+.+.+ ..++.........+...... ...........+..+|..+.+-...-..
T Consensus 9 ~~~~~~v~~~~~~-----~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 9 AGHEYMIVTNYPN-----NLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp TTCEEEEEEETTT-----EEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred CCCEEEEEeCCCC-----eEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 4677888887554 67899998887 23332110011122221111 1111111234567778776654322222
Q ss_pred CC-----CccCCcEEEE-CC-EEEEEecc---CCCCc--eeeeEEEEECCCCceee-CCCCCCCCccceeeEEE-eCCEE
Q 014195 109 PV-----PRLDGAAIQI-KN-LLYVFAGY---GSIDY--VHSHVDIYNFTDNTWGG-RFDMPREMAHSHLGMVT-DGRYI 174 (429)
Q Consensus 109 p~-----~R~~~~~~~~-~~-~iyv~GG~---~~~~~--~~~~~~~yd~~~~~W~~-~~~~~~~~~r~~~~~~~-~~~~l 174 (429)
+. ...-..++.. ++ .||+.+.. ..... ....+.+||+.+++-.. +...+.+ +.-.+++. -++++
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~~~s~dg~l 161 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP--RQVYLMRAADDGSL 161 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC--SSCCCEEECTTSCE
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC--CcccceeECCCCcE
Confidence 21 1112233333 44 56655421 00000 02468999998754221 1111121 12223333 35567
Q ss_pred EEEeCeeCCCCCCCCceeEEEeCCCCceE
Q 014195 175 YVVTGQYGPQCRGPTAHTFVLDTETKKWQ 203 (429)
Q Consensus 175 yv~GG~~~~~~~~~~~~~~~yd~~t~~W~ 203 (429)
|+.+ .++.++|+.+.+-.
T Consensus 162 ~~~~-----------~~i~~~d~~~~~~~ 179 (349)
T 1jmx_B 162 YVAG-----------PDIYKMDVKTGKYT 179 (349)
T ss_dssp EEES-----------SSEEEECTTTCCEE
T ss_pred EEcc-----------CcEEEEeCCCCcee
Confidence 7742 23778888776543
No 194
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=87.47 E-value=6.4 Score=32.87 Aligned_cols=49 Identities=12% Similarity=0.295 Sum_probs=31.3
Q ss_pred ECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEE-----e----cccCcceeeeeeEEECCEEEEEccc
Q 014195 339 VNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHV-----I----GKLPYRVKTTLAGYWNGWLYFTSGQ 403 (429)
Q Consensus 339 ~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~-----v----~~lp~~r~~~~~~~~~~~i~v~GG~ 403 (429)
.++++|+|=|. ..|+||..+++-.. + +.+| ..-.++...++++|+|-|.
T Consensus 108 ~~g~~yfFkg~--------------~ywr~d~~~~~~~~gyPr~i~~~w~Gvp--~~idaa~~~~g~~Yffkg~ 165 (195)
T 1itv_A 108 GRGKMLLFSGR--------------RLWRFDVKAQMVDPRSASEVDRMFPGVP--LDTHDVFQFREKAYFCQDR 165 (195)
T ss_dssp STTEEEEEETT--------------EEEEEETTTTEECGGGCEEHHHHSTTSC--SSCSEEEEETTEEEEEETT
T ss_pred CCCeEEEEeCC--------------EEEEEeCCcccccCCCccChhhcCCCCC--CCCCEEEEeCCeEEEEeCC
Confidence 46899999764 68999987753211 1 1222 2234556678999999873
No 195
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=87.42 E-value=15 Score=35.75 Aligned_cols=64 Identities=8% Similarity=-0.000 Sum_probs=31.9
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 199 (429)
++..++.|+.++ .+.++|.....-..+..... .-.+++.. +++.++.|+. ...+..||...
T Consensus 314 ~~~~l~t~~~d~------~i~~w~~~~~~~~~~~~~~~----~v~~~~~s~~g~~l~~~~~--------dg~v~~~~~~~ 375 (577)
T 2ymu_A 314 DGQTIASASDDK------TVKLWNRNGQHLQTLTGHSS----SVWGVAFSPDGQTIASASD--------DKTVKLWNRNG 375 (577)
T ss_dssp TSSEEEEEETTS------CEEEEETTSCEEEEECCCSS----CEEEEEECTTSSEEEEEET--------TSEEEEEETTC
T ss_pred CCCEEEEEeCCC------eEEEEeCCCCeeEEEeCCCC----CEEEEEECCCCCEEEEEeC--------CCEEEEEcCCC
Confidence 455666666543 36677776654443322211 11223332 5556666653 23566777654
Q ss_pred Cce
Q 014195 200 KKW 202 (429)
Q Consensus 200 ~~W 202 (429)
..-
T Consensus 376 ~~~ 378 (577)
T 2ymu_A 376 QLL 378 (577)
T ss_dssp CEE
T ss_pred CEE
Confidence 433
No 196
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=87.40 E-value=24 Score=34.91 Aligned_cols=27 Identities=7% Similarity=0.087 Sum_probs=18.2
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGR 153 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~ 153 (429)
+++.++.|+.++ .+.++|..+.+....
T Consensus 335 dg~~l~s~s~D~------~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 335 DGKTLFSADAEG------HINSWDISTGISNRV 361 (611)
T ss_dssp TSSEEEEEETTS------CEEEEETTTCCEEEC
T ss_pred CCCEEEEEeCCC------cEEEEECCCCceeee
Confidence 566677777654 377899888766543
No 197
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=87.40 E-value=22 Score=35.25 Aligned_cols=101 Identities=10% Similarity=0.126 Sum_probs=46.7
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CC-EEEEEeCeeCCCCCCCCceeEEEeCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GR-YIYVVTGQYGPQCRGPTAHTFVLDTE 198 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~yd~~ 198 (429)
+++.++.+|.+... ...++.+|..+ .+..+... ...-.+++.. ++ ..++.|+.+ ..+..||..
T Consensus 114 dg~~l~~~~~~~~~--~~~v~~wd~~~----~~~~l~gh-~~~v~~v~f~p~~~~~l~s~s~D--------~~v~lwd~~ 178 (611)
T 1nr0_A 114 ESKRIAAVGEGRER--FGHVFLFDTGT----SNGNLTGQ-ARAMNSVDFKPSRPFRIISGSDD--------NTVAIFEGP 178 (611)
T ss_dssp TSCEEEEEECCSSC--SEEEEETTTCC----BCBCCCCC-SSCEEEEEECSSSSCEEEEEETT--------SCEEEEETT
T ss_pred CCCEEEEEECCCCc--eeEEEEeeCCC----CcceecCC-CCCceEEEECCCCCeEEEEEeCC--------CeEEEEECC
Confidence 45666666654332 23477777422 12223221 1122233333 22 356666643 356677766
Q ss_pred CCceEeCCCCCCCCCCceEEEE--CCEEEEEeCCCCCCCCccccceE
Q 014195 199 TKKWQDLPPLPVPRYAPATQLW--RGRLHVMGGSGENRYTPEVDHWS 243 (429)
Q Consensus 199 t~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~ 243 (429)
+.+... .+......-..+.+ ++++++.|+.++ .+..|+
T Consensus 179 ~~~~~~--~l~~H~~~V~~v~fspdg~~las~s~D~-----~i~lwd 218 (611)
T 1nr0_A 179 PFKFKS--TFGEHTKFVHSVRYNPDGSLFASTGGDG-----TIVLYN 218 (611)
T ss_dssp TBEEEE--EECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEE
T ss_pred CCeEee--eeccccCceEEEEECCCCCEEEEEECCC-----cEEEEE
Confidence 544322 12111111122222 677888887653 466676
No 198
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=87.28 E-value=27 Score=35.32 Aligned_cols=80 Identities=14% Similarity=0.051 Sum_probs=46.1
Q ss_pred cEEEECCEEEEEeccCCCCceeeeEEEEECCCCc--eeeCCC-CCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCCcee
Q 014195 116 AAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFD-MPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHT 192 (429)
Q Consensus 116 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~-~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~ 192 (429)
+.++.+++||+... ...+.++|..+.+ |+.-.. -.........+.++.++.||+..+.... .....+
T Consensus 123 ~~a~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~---~~~g~v 192 (677)
T 1kb0_A 123 GVALWKGKVYVGAW-------DGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEY---GVRGYI 192 (677)
T ss_dssp CCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTT---CCBCEE
T ss_pred CceEECCEEEEEcC-------CCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEeccccc---CCCCEE
Confidence 44556888888642 1358899998775 875322 1110011223345668888775432111 114579
Q ss_pred EEEeCCCCc--eEeC
Q 014195 193 FVLDTETKK--WQDL 205 (429)
Q Consensus 193 ~~yd~~t~~--W~~~ 205 (429)
+.||..|.+ |+.-
T Consensus 193 ~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 193 TAYDAETGERKWRWF 207 (677)
T ss_dssp EEEETTTCCEEEEEE
T ss_pred EEEECCCCcEEEEec
Confidence 999998875 8763
No 199
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=87.25 E-value=7.5 Score=34.30 Aligned_cols=93 Identities=10% Similarity=0.027 Sum_probs=46.7
Q ss_pred ccccccccCCCeEEc-cCCCC--C-ccCCcEEEE-CCEEEEEeccCC---------CCceeeeEEEEECCCCceeeCCC-
Q 014195 91 TFQDLPAPELKWEKM-KAAPV--P-RLDGAAIQI-KNLLYVFAGYGS---------IDYVHSHVDIYNFTDNTWGGRFD- 155 (429)
Q Consensus 91 ~~~~~d~~~~~W~~~-~~~p~--~-R~~~~~~~~-~~~iyv~GG~~~---------~~~~~~~~~~yd~~~~~W~~~~~- 155 (429)
.+..+|+. ++...+ ..... + ..-..++.. ++.+|+....+. .......+++||+. .+...+..
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~ 170 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTA 170 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEE
T ss_pred CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccC
Confidence 56677877 666655 33221 1 111233332 567888654321 11112468999987 55544321
Q ss_pred CCCCCccceeeEEEe-----CC-EEEEEeCeeCCCCCCCCceeEEEeCC
Q 014195 156 MPREMAHSHLGMVTD-----GR-YIYVVTGQYGPQCRGPTAHTFVLDTE 198 (429)
Q Consensus 156 ~~~~~~r~~~~~~~~-----~~-~lyv~GG~~~~~~~~~~~~~~~yd~~ 198 (429)
+.. ..++++. ++ .||+.... ...+++||+.
T Consensus 171 ~~~-----~~~i~~~~~~d~dg~~l~v~~~~--------~~~i~~~~~~ 206 (314)
T 1pjx_A 171 FQF-----PNGIAVRHMNDGRPYQLIVAETP--------TKKLWSYDIK 206 (314)
T ss_dssp ESS-----EEEEEEEECTTSCEEEEEEEETT--------TTEEEEEEEE
T ss_pred CCC-----cceEEEecccCCCCCEEEEEECC--------CCeEEEEECC
Confidence 111 1233333 33 57776421 3578888876
No 200
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=86.73 E-value=6.1 Score=37.20 Aligned_cols=20 Identities=15% Similarity=0.227 Sum_probs=13.2
Q ss_pred CEEEEEeccCCCCceeeeEEEEECCC
Q 014195 122 NLLYVFAGYGSIDYVHSHVDIYNFTD 147 (429)
Q Consensus 122 ~~iyv~GG~~~~~~~~~~~~~yd~~~ 147 (429)
+.+++.|+.++ .+.+||..+
T Consensus 141 ~~~lat~~~dg------~V~vwd~~~ 160 (430)
T 2xyi_A 141 ACVIATKTPSS------DVLVFDYTK 160 (430)
T ss_dssp EEEEEEECSSS------CEEEEEGGG
T ss_pred CcEEEEECCCC------cEEEEECCC
Confidence 45777776543 377888765
No 201
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=86.39 E-value=4.2 Score=36.54 Aligned_cols=150 Identities=7% Similarity=-0.111 Sum_probs=69.3
Q ss_pred cceeeeecCCCcccceeeeeeecCCCCe-EEecCCCCCCCcceeeeecC--CCCcCcc--cccccccccccCCCeEEc-c
Q 014195 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-IILPNNGPQKGENIGVKTKK--DVVPKRI--LPATFQDLPAPELKWEKM-K 106 (429)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~yd~~~~~-~~~p~~~~r~~~~~~~~~~~--~~~~~~~--~~~~~~~~d~~~~~W~~~-~ 106 (429)
++.||+.+..++ .+.+||+.+.+ ..+.......-.+++..... +...... ....+..+|+.+.....+ .
T Consensus 55 ~g~l~~~~~~~~-----~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~ 129 (333)
T 2dg1_A 55 QGQLFLLDVFEG-----NIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIE 129 (333)
T ss_dssp TSCEEEEETTTC-----EEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEEC
T ss_pred CCCEEEEECCCC-----EEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEc
Confidence 556777665433 67889998877 33321111111112111111 1100000 013567788777665422 2
Q ss_pred CCCCCccCCcEEEE-CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-C-CEEEEEeCeeCC
Q 014195 107 AAPVPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-G-RYIYVVTGQYGP 183 (429)
Q Consensus 107 ~~p~~R~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~-~~lyv~GG~~~~ 183 (429)
.......-..++.. ++.+|+.............++++|+.+.+...+..-. ....+++.. + +.||+....
T Consensus 130 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~i~~~~dg~~l~v~~~~--- 202 (333)
T 2dg1_A 130 DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNI----SVANGIALSTDEKVLWVTETT--- 202 (333)
T ss_dssp SSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEE----SSEEEEEECTTSSEEEEEEGG---
T ss_pred cCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCC----CcccceEECCCCCEEEEEeCC---
Confidence 11111111122222 5678876532211112346899999887766542110 112334433 3 368876421
Q ss_pred CCCCCCceeEEEeCCC
Q 014195 184 QCRGPTAHTFVLDTET 199 (429)
Q Consensus 184 ~~~~~~~~~~~yd~~t 199 (429)
...+++||+.+
T Consensus 203 -----~~~i~~~d~~~ 213 (333)
T 2dg1_A 203 -----ANRLHRIALED 213 (333)
T ss_dssp -----GTEEEEEEECT
T ss_pred -----CCeEEEEEecC
Confidence 34788888854
No 202
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=86.31 E-value=27 Score=34.74 Aligned_cols=64 Identities=11% Similarity=0.093 Sum_probs=35.2
Q ss_pred eEEEEECCCCc--eeeCCCCCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCCceeEEEeCCCCc--eEeC
Q 014195 139 HVDIYNFTDNT--WGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKK--WQDL 205 (429)
Q Consensus 139 ~~~~yd~~~~~--W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~--W~~~ 205 (429)
.+.++|.++.+ |+.-..-+........+-++.++.||+-.+.... .....+..||.+|.+ |+.-
T Consensus 132 ~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~---g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 132 NVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAEL---GVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGG---TCCCEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEeccccc---CCCCeEEEEECCCCcEEEEEc
Confidence 48899998875 8753211110001122334568888764321111 114578999999865 8754
No 203
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=86.31 E-value=16 Score=31.89 Aligned_cols=57 Identities=5% Similarity=-0.023 Sum_probs=32.3
Q ss_pred ccccccccccCCCeEEccCCCCCccCCcEEEE--CCEEEEEeccCCCCceeeeEEEEECCCCcee
Q 014195 89 PATFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWG 151 (429)
Q Consensus 89 ~~~~~~~d~~~~~W~~~~~~p~~R~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~ 151 (429)
...+..+|..+++-.++-.+......-.++.. +++.++.|+.++ .+.++|..+++-.
T Consensus 44 D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg------~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 44 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA------EVQLWDVQQQKRL 102 (318)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS------EEEEEETTTTEEE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCC------cEEEeecCCceeE
Confidence 34566778777765444333222211122222 567777887654 4788998887643
No 204
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=86.14 E-value=7.7 Score=39.22 Aligned_cols=66 Identities=9% Similarity=0.005 Sum_probs=33.1
Q ss_pred CEEEEEeccCCCCceeeeEEEEECCCCcee--e-CCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeC
Q 014195 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNTWG--G-RFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (429)
Q Consensus 122 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~--~-~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~ 197 (429)
..+++.|+.++ .+.+||..++.-. . ...+... ...-.+++.. ++++++.|+. ...+.+||.
T Consensus 395 ~~~l~s~s~D~------~i~~W~~~~~~~~~~~~~~~~~~h-~~~v~~v~~s~~g~~l~sgs~--------Dg~v~vwd~ 459 (694)
T 3dm0_A 395 ADIIVSASRDK------SIILWKLTKDDKAYGVAQRRLTGH-SHFVEDVVLSSDGQFALSGSW--------DGELRLWDL 459 (694)
T ss_dssp CSEEEEEETTS------EEEEEECCCSTTCSCEEEEEEECC-SSCEEEEEECTTSSEEEEEET--------TSEEEEEET
T ss_pred CCEEEEEeCCC------cEEEEEccCCCcccccccceecCC-CCcEEEEEECCCCCEEEEEeC--------CCcEEEEEC
Confidence 35777777654 3677777654211 1 0011110 0111223322 5667777764 346778888
Q ss_pred CCCce
Q 014195 198 ETKKW 202 (429)
Q Consensus 198 ~t~~W 202 (429)
.+.+-
T Consensus 460 ~~~~~ 464 (694)
T 3dm0_A 460 AAGVS 464 (694)
T ss_dssp TTTEE
T ss_pred CCCcc
Confidence 77643
No 205
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=85.88 E-value=15 Score=33.03 Aligned_cols=102 Identities=9% Similarity=0.093 Sum_probs=47.1
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCcee-----eCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEE
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWG-----GRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFV 194 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~-----~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~ 194 (429)
++.+++.|+.++ .+.+||..+.+-. ....+... ...-.+++.. ++.+++.|+. ...+..
T Consensus 38 d~~~l~sgs~D~------~v~iWd~~~~~~~~~~~~~~~~l~~h-~~~V~~~~~~~~~~~l~s~s~--------D~~v~l 102 (343)
T 2xzm_R 38 DSPVLISGSRDK------TVMIWKLYEEEQNGYFGIPHKALTGH-NHFVSDLALSQENCFAISSSW--------DKTLRL 102 (343)
T ss_dssp CCCEEEEEETTS------CEEEEEECSSCCSSBSEEEEEEECCC-SSCEEEEEECSSTTEEEEEET--------TSEEEE
T ss_pred CCCEEEEEcCCC------EEEEEECCcCCcccccccccchhccC-CCceEEEEECCCCCEEEEEcC--------CCcEEE
Confidence 456778887654 2666776543211 11111110 0111222332 4556666654 346778
Q ss_pred EeCCCCceEeCCCCCCCCCCceEEEE--CCEEEEEeCCCCCCCCccccceEe
Q 014195 195 LDTETKKWQDLPPLPVPRYAPATQLW--RGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 195 yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
||..+.+.... +......-..+.+ +++.++.||.+ ..+..|++
T Consensus 103 wd~~~~~~~~~--~~~h~~~v~~v~~sp~~~~l~s~~~d-----~~i~~wd~ 147 (343)
T 2xzm_R 103 WDLRTGTTYKR--FVGHQSEVYSVAFSPDNRQILSAGAE-----REIKLWNI 147 (343)
T ss_dssp EETTSSCEEEE--EECCCSCEEEEEECSSTTEEEEEETT-----SCEEEEES
T ss_pred EECCCCcEEEE--EcCCCCcEEEEEECCCCCEEEEEcCC-----CEEEEEec
Confidence 88887654321 1100111112222 56666777755 34566663
No 206
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=85.59 E-value=32 Score=34.63 Aligned_cols=98 Identities=18% Similarity=0.284 Sum_probs=58.6
Q ss_pred CcEEEECCEEEEEeccCCCCceeeeEEEEECCCCc--eeeCCCCCCCCc------cceeeEEEeCCEEEEEeCeeCCCCC
Q 014195 115 GAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREMA------HSHLGMVTDGRYIYVVTGQYGPQCR 186 (429)
Q Consensus 115 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~------r~~~~~~~~~~~lyv~GG~~~~~~~ 186 (429)
.+-++.++.||+.... ..++++|..+.+ |+.-...+.... ....+.++.+++||+...
T Consensus 60 ~~P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------- 125 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMSW-------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL------- 125 (668)
T ss_dssp CCCEEETTEEEEEEGG-------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-------
T ss_pred cCCEEECCEEEEECCC-------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-------
Confidence 3445679999997642 358899988775 876433321000 012345667888887532
Q ss_pred CCCceeEEEeCCCCc--eEeCCCCCC--CCCCceEEEECCEEEEEe
Q 014195 187 GPTAHTFVLDTETKK--WQDLPPLPV--PRYAPATQLWRGRLHVMG 228 (429)
Q Consensus 187 ~~~~~~~~yd~~t~~--W~~~~~~p~--~r~~~~~~~~~~~lyv~G 228 (429)
...++.+|.+|.+ |+.-..-+. .....+-++.++++|+-.
T Consensus 126 --dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~ 169 (668)
T 1kv9_A 126 --DGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGN 169 (668)
T ss_dssp --TSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECC
T ss_pred --CCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeC
Confidence 3578999998875 886432111 122233456788888753
No 207
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=85.51 E-value=8.9 Score=37.72 Aligned_cols=199 Identities=12% Similarity=0.029 Sum_probs=93.4
Q ss_pred EEECCEEEEEecc-CCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCCceeEEEe
Q 014195 118 IQIKNLLYVFAGY-GSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLD 196 (429)
Q Consensus 118 ~~~~~~iyv~GG~-~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd 196 (429)
...+++.+++++. ++ .+.+|+..+.+-.++...+. ..-.+.+...+++.+.....+... ...+|..+
T Consensus 29 ~~~DG~~la~~s~~~g------~~~lw~~~~g~~~~lt~~~~---~~~~~~~~spd~~l~~~~~~~g~~---~~~l~~~~ 96 (582)
T 3o4h_A 29 GVVDGDKLLVVGFSEG------SVNAYLYDGGETVKLNREPI---NSVLDPHYGVGRVILVRDVSKGAE---QHALFKVN 96 (582)
T ss_dssp EEETTTEEEEEEEETT------EEEEEEEETTEEEECCSSCC---SEECEECTTCSEEEEEEECSTTSC---CEEEEEEE
T ss_pred cCCCCCeEEEEEccCC------ceeEEEEcCCCcEeeecccc---cccccccCCCCeEEEEeccCCCCc---ceEEEEEe
Confidence 3456666666554 32 24455555665555543321 112222333345555443211111 45677787
Q ss_pred C--CCCceEeCCCCCCCCCCceEEEECC-EEEEEeCCCCCCCCccccceEeeeecCCccccceeeccCCCCCCCceeEEE
Q 014195 197 T--ETKKWQDLPPLPVPRYAPATQLWRG-RLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVV 273 (429)
Q Consensus 197 ~--~t~~W~~~~~~p~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~ 273 (429)
. ....- .+...+..+ ......++ .++++.+..+. ...|++ .+.+-+.+...+. . ..+..
T Consensus 97 ~~~~g~~~-~l~~~~~~~--~~~~s~dg~~~~~~s~~~~~-----~~l~d~-------~~g~~~~l~~~~~--~-~~~~s 158 (582)
T 3o4h_A 97 TSRPGEEQ-RLEAVKPMR--ILSGVDTGEAVVFTGATEDR-----VALYAL-------DGGGLRELARLPG--F-GFVSD 158 (582)
T ss_dssp TTSTTCCE-ECTTSCSBE--EEEEEECSSCEEEEEECSSC-----EEEEEE-------ETTEEEEEEEESS--C-EEEEE
T ss_pred ccCCCccc-cccCCCCce--eeeeCCCCCeEEEEecCCCC-----ceEEEc-------cCCcEEEeecCCC--c-eEEEC
Confidence 7 44332 443333222 22334443 45555443321 226653 3444333332232 2 23344
Q ss_pred eCCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCCCCCCCCCcceeEEEECCEEEEEcccCCC
Q 014195 274 VDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEK 352 (429)
Q Consensus 274 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~~~~r~~~~~~~~~~~~~i~v~GG~~~~ 352 (429)
-+++.+++++..... ..++|.+| .+.+++.+...... . ..-....||+.++.+..++.
T Consensus 159 pDG~~la~~~~~~~~------------------~~~i~~~d~~~g~~~~l~~~~~~--~-~~~~~SpDG~~l~~~~~~~~ 217 (582)
T 3o4h_A 159 IRGDLIAGLGFFGGG------------------RVSLFTSNLSSGGLRVFDSGEGS--F-SSASISPGMKVTAGLETARE 217 (582)
T ss_dssp EETTEEEEEEEEETT------------------EEEEEEEETTTCCCEEECCSSCE--E-EEEEECTTSCEEEEEECSSC
T ss_pred CCCCEEEEEEEcCCC------------------CeEEEEEcCCCCCceEeecCCCc--c-ccceECCCCCEEEEccCCCe
Confidence 567666655543210 12488888 77888776532211 1 11123456766554332221
Q ss_pred CCCccceeeeCcEEEEecCCCCeEE
Q 014195 353 HPTTKKMVLVGEIFQFNLNTLKWHV 377 (429)
Q Consensus 353 ~~~~~~~~~~~~i~~yd~~~~~W~~ 377 (429)
..|+++|+++.+.+.
T Consensus 218 ----------~~i~~~d~~~~~~~~ 232 (582)
T 3o4h_A 218 ----------ARLVTVDPRDGSVED 232 (582)
T ss_dssp ----------EEEEEECTTTCCEEE
T ss_pred ----------eEEEEEcCCCCcEEE
Confidence 279999999888773
No 208
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=84.74 E-value=5 Score=34.24 Aligned_cols=55 Identities=25% Similarity=0.425 Sum_probs=27.9
Q ss_pred ECCEEEEEeCCCCCCCCccccceEeeeecCCccccceeeccCCCCCCCceeEEEeCCEEEEEccc
Q 014195 220 WRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQ 284 (429)
Q Consensus 220 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~ 284 (429)
.++++|+|=|..--.+....+.... .+.+..|..+ |.. .. ++...++++|+|-|.
T Consensus 27 ~~g~~yfFkg~~~Wr~~~~~~~~~p-----~~Is~~wpgL---P~~-ID-AA~~~~~~~yfFkG~ 81 (219)
T 1hxn_A 27 NHGATYVFSGSHYWRLDTNRDGWHS-----WPIAHQWPQG---PST-VD-AAFSWEDKLYLIQDT 81 (219)
T ss_dssp TTSCEEEEETTEEEESSSSSCTTCC-----EEGGGTCTTS---CSS-CS-EEEEETTEEEEEETT
T ss_pred CCCcEEEEeCCEEEEEcCCCCCCCc-----eEhhhhccCC---CCC-cc-EEEEECCcEEEecCC
Confidence 4789999977421111111111000 0234456544 332 22 444459999999875
No 209
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=84.61 E-value=13 Score=33.09 Aligned_cols=63 Identities=5% Similarity=0.005 Sum_probs=34.0
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceee-CCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGG-RFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~ 198 (429)
++..++.|+.++ .+.+||..+++-.. +..... .-.+++.. ++.+++.|+.+ ..+..||..
T Consensus 76 dg~~l~s~s~D~------~v~~wd~~~~~~~~~~~~h~~----~v~~~~~~~~~~~l~s~s~D--------~~i~vwd~~ 137 (319)
T 3frx_A 76 DGAYALSASWDK------TLRLWDVATGETYQRFVGHKS----DVMSVDIDKKASMIISGSRD--------KTIKVWTIK 137 (319)
T ss_dssp TSSEEEEEETTS------EEEEEETTTTEEEEEEECCSS----CEEEEEECTTSCEEEEEETT--------SCEEEEETT
T ss_pred CCCEEEEEeCCC------EEEEEECCCCCeeEEEccCCC----cEEEEEEcCCCCEEEEEeCC--------CeEEEEECC
Confidence 456677777653 48889988876432 111111 11223332 55677777653 345667776
Q ss_pred CCc
Q 014195 199 TKK 201 (429)
Q Consensus 199 t~~ 201 (429)
...
T Consensus 138 ~~~ 140 (319)
T 3frx_A 138 GQC 140 (319)
T ss_dssp SCE
T ss_pred CCe
Confidence 543
No 210
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=84.33 E-value=12 Score=33.47 Aligned_cols=99 Identities=9% Similarity=0.055 Sum_probs=47.0
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-------CCEEEEEeCeeCCCCCCCCceeE
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-------GRYIYVVTGQYGPQCRGPTAHTF 193 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-------~~~lyv~GG~~~~~~~~~~~~~~ 193 (429)
++.+++.|+.++ .+.+||.....-..+..... .-.++... ++.+++.|+. ...+.
T Consensus 118 ~~~~l~s~s~D~------~i~vwd~~~~~~~~~~~h~~----~v~~~~~~~~~~~~~~~~~l~s~~~--------d~~i~ 179 (319)
T 3frx_A 118 KASMIISGSRDK------TIKVWTIKGQCLATLLGHND----WVSQVRVVPNEKADDDSVTIISAGN--------DKMVK 179 (319)
T ss_dssp TSCEEEEEETTS------CEEEEETTSCEEEEECCCSS----CEEEEEECCC------CCEEEEEET--------TSCEE
T ss_pred CCCEEEEEeCCC------eEEEEECCCCeEEEEeccCC----cEEEEEEccCCCCCCCccEEEEEeC--------CCEEE
Confidence 456777777654 36778876543332221111 11122222 2335555554 23567
Q ss_pred EEeCCCCceEeCCCCCCCCCCceEEE--ECCEEEEEeCCCCCCCCccccceEe
Q 014195 194 VLDTETKKWQDLPPLPVPRYAPATQL--WRGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 194 ~yd~~t~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
.||..+.+-... +......-..+. -++++++.|+.++ .+..|++
T Consensus 180 ~wd~~~~~~~~~--~~~h~~~v~~~~~sp~g~~l~s~~~dg-----~i~iwd~ 225 (319)
T 3frx_A 180 AWNLNQFQIEAD--FIGHNSNINTLTASPDGTLIASAGKDG-----EIMLWNL 225 (319)
T ss_dssp EEETTTTEEEEE--ECCCCSCEEEEEECTTSSEEEEEETTC-----EEEEEET
T ss_pred EEECCcchhhee--ecCCCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEEC
Confidence 788876543221 111111111222 2677777877653 4666764
No 211
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=83.95 E-value=22 Score=32.88 Aligned_cols=47 Identities=15% Similarity=0.183 Sum_probs=29.2
Q ss_pred CCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEE-----e----cccCcceeeeeeEEE-CCEEEEEcc
Q 014195 340 NNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHV-----I----GKLPYRVKTTLAGYW-NGWLYFTSG 402 (429)
Q Consensus 340 ~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~-----v----~~lp~~r~~~~~~~~-~~~i~v~GG 402 (429)
++++|+|=|. ..|+||..+++-.. + +.+| ..--+++.. ++++|+|-|
T Consensus 284 ~~~~yfFkG~--------------~yw~yd~~~~~v~~gyPk~I~~~f~g~p--~~iDaA~~~~~g~~YfFkg 340 (365)
T 3ba0_A 284 FYRTYFFVDN--------------QYWRYDERRQMMDPGYPKLITKNFQGIG--PKIDAVFYSKNKYYYFFQG 340 (365)
T ss_dssp TTEEEEEETT--------------EEEEEETTTTEECSSCCCCHHHHSTTCC--SSCSEEEEETTTEEEEEET
T ss_pred CCEEEEEECC--------------EEEEEeCCcceecCCCCcchhhcCCCCC--CccceeeEecCCcEEEEeC
Confidence 5799999763 68999987654211 0 1122 122344445 899999977
No 212
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=83.77 E-value=43 Score=34.54 Aligned_cols=235 Identities=14% Similarity=0.190 Sum_probs=116.4
Q ss_pred CCCeEEccCCCCCccCCcEEEE---CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCC---CccceeeEEEe--
Q 014195 99 ELKWEKMKAAPVPRLDGAAIQI---KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPRE---MAHSHLGMVTD-- 170 (429)
Q Consensus 99 ~~~W~~~~~~p~~R~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~---~~r~~~~~~~~-- 170 (429)
..+|+.+......| -.+++.. .+.+|+ |+..+ -+++-+-...+|+.+...+.+ ..+.-.++++.
T Consensus 3 ~~~W~~~~~~~~g~-i~~i~~~p~~~~~~~a-~~~~g------gv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~ 74 (789)
T 1sqj_A 3 HYEFKNVAIGGGGY-ITGIVAHPKTKDLLYA-RTDIG------GAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPN 74 (789)
T ss_dssp -CEEEECCCCBCSC-EEEEEECSSSTTCEEE-EESSS------CEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETT
T ss_pred cccceEccCCCCCc-EEEEEECCCCCCEEEE-EecCC------CEEEecCCCCCeeECccCCCcccccCCceeEEEECCC
Confidence 34688887633222 2223332 234555 43221 267777778899998653321 11334455554
Q ss_pred -CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCC-CC-----CCC-CCceEEEE---CCEEEEEeCCCCCCCCccc
Q 014195 171 -GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPP-LP-----VPR-YAPATQLW---RGRLHVMGGSGENRYTPEV 239 (429)
Q Consensus 171 -~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~-~p-----~~r-~~~~~~~~---~~~lyv~GG~~~~~~~~~~ 239 (429)
.+.+|+..|...... ...+++=+-.-.+|+.+.. ++ ..| ..+.+++. .+.+|+ |... .
T Consensus 75 ~~~~i~~~~g~~~~~~---~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~-g~~~-------~ 143 (789)
T 1sqj_A 75 NPDRLYLAQGRYVGDE---WAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWM-GTRT-------E 143 (789)
T ss_dssp EEEEEEEEECSCTTSS---CCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEE-ECSS-------S
T ss_pred CCCEEEEEeCccCCCc---ccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEE-Eecc-------C
Confidence 257888765321010 1455555555678998742 22 122 22345543 345666 3311 1
Q ss_pred cceEeeeecCCccccceeeccCCCC---CCCceeEEEe----CCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEE
Q 014195 240 DHWSLAVKDGKPLEKEWRTEIPIPR---GGPHRACVVV----DDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYM 312 (429)
Q Consensus 240 ~~~~~~~~~~d~~~~~W~~~~~~p~---~~~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 312 (429)
..|.- +..-++|+....+|. .......+.+ .+.||+...... .+|+
T Consensus 144 gl~~S-----~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~----------------------~v~~ 196 (789)
T 1sqj_A 144 GIWKS-----SDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAPQ----------------------GMYV 196 (789)
T ss_dssp CEEEE-----SSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESSTT----------------------CEEE
T ss_pred CEEEE-----CCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCCC----------------------eEEE
Confidence 23332 134578888765441 1122233333 245776543211 2555
Q ss_pred eC-CCCCeEEcCCCCCCC----------------CCcceeEEEECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCe
Q 014195 313 LD-DEMKWKVLPSMPKPD----------------SHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKW 375 (429)
Q Consensus 313 ~d-~~~~W~~~~~~~~~r----------------~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W 375 (429)
-. ...+|+.+..++... ..+...+...++.||+..+..... ... ....+++.+-...+|
T Consensus 197 S~DgG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~p-~~g---~~g~l~~S~DgG~tW 272 (789)
T 1sqj_A 197 THDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYPGP-WGV---TFGEVWRQNRTSGAW 272 (789)
T ss_dssp ESSTTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEESSCSS-SCC---CCCCEEEEETTTCCE
T ss_pred EcCCCcCcccCCCCcCccccccccccCcccccccccceeEEcCCCCeEEEEEecCCCC-CCC---CCceEEEEeCCCCce
Confidence 54 678999988544321 002221111178888885321100 000 123688888888999
Q ss_pred EEecccCc
Q 014195 376 HVIGKLPY 383 (429)
Q Consensus 376 ~~v~~lp~ 383 (429)
+.+...|.
T Consensus 273 ~~~~~~~~ 280 (789)
T 1sqj_A 273 DDITPRVG 280 (789)
T ss_dssp EECCCCTT
T ss_pred EECcCCCC
Confidence 99876543
No 213
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=83.73 E-value=30 Score=35.26 Aligned_cols=52 Identities=13% Similarity=0.173 Sum_probs=30.0
Q ss_pred eEEeC-CCCCeEEcC--CCCCCCCCcceeEEEECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEEe
Q 014195 310 VYMLD-DEMKWKVLP--SMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVI 378 (429)
Q Consensus 310 v~~~d-~~~~W~~~~--~~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v 378 (429)
+++|| .+.+++... .++. . .-.+++.-++.|++... +-+.+|||++.+.+..
T Consensus 538 l~~~~~~~~~~~~~~~~gl~~--~-~i~~i~~~~g~lWi~t~--------------~Gl~~~~~~~~~~~~~ 592 (758)
T 3ott_A 538 VMRINPKDESQQSISFGSFSN--N-EILSMTCVKNSIWVSTT--------------NGLWIIDRKTMDARQQ 592 (758)
T ss_dssp EEEECC--CCCCBCCCCC-----C-CEEEEEEETTEEEEEES--------------SCEEEEETTTCCEEEC
T ss_pred eEEEecCCCceEEecccCCCc--c-ceEEEEECCCCEEEECC--------------CCeEEEcCCCceeEEe
Confidence 77787 666665543 2332 1 12334455788887652 1488999999887764
No 214
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=82.91 E-value=8.8 Score=37.73 Aligned_cols=97 Identities=11% Similarity=-0.038 Sum_probs=53.5
Q ss_pred cccccCCCeEEccCCCCCccCCcEEEECCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CC
Q 014195 94 DLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GR 172 (429)
Q Consensus 94 ~~d~~~~~W~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~ 172 (429)
.+|..+.+-+.+...+. ......-+++.++++..+..+ ...++++|+.+.+++.+...+. .. ...+.. ++
T Consensus 136 l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~--~~~i~~~d~~~g~~~~l~~~~~--~~--~~~~~SpDG 206 (582)
T 3o4h_A 136 LYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGG--RVSLFTSNLSSGGLRVFDSGEG--SF--SSASISPGM 206 (582)
T ss_dssp EEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETT--EEEEEEEETTTCCCEEECCSSC--EE--EEEEECTTS
T ss_pred EEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCC--CeEEEEEcCCCCCceEeecCCC--cc--ccceECCCC
Confidence 45666655555443332 222233466666666554333 1359999999999887754332 11 222222 44
Q ss_pred EEEEEeCeeCCCCCCCCceeEEEeCCCCceEeC
Q 014195 173 YIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDL 205 (429)
Q Consensus 173 ~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~ 205 (429)
+.++.+..++ ...++.+|+++.+...+
T Consensus 207 ~~l~~~~~~~------~~~i~~~d~~~~~~~~~ 233 (582)
T 3o4h_A 207 KVTAGLETAR------EARLVTVDPRDGSVEDL 233 (582)
T ss_dssp CEEEEEECSS------CEEEEEECTTTCCEEEC
T ss_pred CEEEEccCCC------eeEEEEEcCCCCcEEEc
Confidence 4443332211 35899999999888743
No 215
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=82.25 E-value=26 Score=30.92 Aligned_cols=81 Identities=16% Similarity=0.210 Sum_probs=40.4
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCC-ceeeCCCCCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCCceeEEEeCC-
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDN-TWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTE- 198 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~- 198 (429)
++.||+.. .+ +.+||+..+ .|..- .+.. .....++.++.||+... ...+++||+.
T Consensus 70 ~g~l~v~t--------~~-l~~~d~~g~~~~~~~--~~~~---~~~~~~~~~~~l~v~t~---------~~~l~~~d~~g 126 (330)
T 3hxj_A 70 DGTIYFGS--------DK-VYAINPDGTEKWRFD--TKKA---IVSDFTIFEDILYVTSM---------DGHLYAINTDG 126 (330)
T ss_dssp TTEECCSS--------CE-EEEECCCGGGGGGSC--C--------CCEEEETTEEEEECT---------TSEEEEECTTS
T ss_pred CCcEEEec--------Cc-EEEECCCCcEEEEEE--CCCC---cccCceEECCEEEEEec---------CCEEEEEcCCC
Confidence 56777632 12 888997433 35432 1111 11223334888887531 3468889987
Q ss_pred CCceEeCCCCCCCCCCceEEEE-CCEEEEE
Q 014195 199 TKKWQDLPPLPVPRYAPATQLW-RGRLHVM 227 (429)
Q Consensus 199 t~~W~~~~~~p~~r~~~~~~~~-~~~lyv~ 227 (429)
...|....+.+ . ..+.+.. ++.||+.
T Consensus 127 ~~~~~~~~~~~--~-~~~~~~~~~g~l~vg 153 (330)
T 3hxj_A 127 TEKWRFKTKKA--I-YATPIVSEDGTIYVG 153 (330)
T ss_dssp CEEEEEECSSC--C-CSCCEECTTSCEEEE
T ss_pred CEEEEEcCCCc--e-eeeeEEcCCCEEEEE
Confidence 34576543221 1 1222333 6677764
No 216
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=82.08 E-value=50 Score=34.06 Aligned_cols=245 Identities=11% Similarity=0.129 Sum_probs=114.7
Q ss_pred ccccccCCCeEEccCCCC-----CccCCcEEEEC---CEEEEEeccCCCCceeeeEEEEECCCCceeeCCC-CCCC---C
Q 014195 93 QDLPAPELKWEKMKAAPV-----PRLDGAAIQIK---NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFD-MPRE---M 160 (429)
Q Consensus 93 ~~~d~~~~~W~~~~~~p~-----~R~~~~~~~~~---~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~-~~~~---~ 160 (429)
++-+....+|+++...+. .+.-++++.-. +.+|+..|....... ..+++=+-.-.+|+.+.. ++.+ .
T Consensus 40 ~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~-~~v~~S~DgG~TW~~~~~~~~~~~~~~ 118 (789)
T 1sqj_A 40 YRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEW-AAFYVSEDRGQSFTIYESPFPMGANDM 118 (789)
T ss_dssp EEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSC-CEEEEESSTTSEEEEEECSSCCCTTST
T ss_pred EEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcc-cEEEEECCCCCcceeccCCcccCccCC
Confidence 344445668999765332 12223333332 468887664221111 234444445668998742 1110 0
Q ss_pred cc-ceeeEEEe---CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCC---CCCCceEEEE----CCEEEEEeC
Q 014195 161 AH-SHLGMVTD---GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPV---PRYAPATQLW----RGRLHVMGG 229 (429)
Q Consensus 161 ~r-~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~---~r~~~~~~~~----~~~lyv~GG 229 (429)
.| ..+.+++. .+.+|+ |.. ...+++=+-.-.+|+++..+|. .-.....+.+ .+.||+...
T Consensus 119 ~~~~~~~iav~p~~~~~v~~-g~~--------~~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~ 189 (789)
T 1sqj_A 119 GRNNGERLAVNPFNSNEVWM-GTR--------TEGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASAT 189 (789)
T ss_dssp TTTSCCCEEEETTEEEEEEE-ECS--------SSCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEES
T ss_pred CccceeEEEEcCCCCCEEEE-Eec--------cCCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEc
Confidence 12 12344444 356666 331 2345544444578999876441 1122223333 246777653
Q ss_pred CCCCCCCccccceEeeeecCCccccceeeccCCCCCC----------------CceeEEEe--CCEEEEEcccCCCCCCC
Q 014195 230 SGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGG----------------PHRACVVV--DDRLLVIGGQEGDFMAK 291 (429)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~----------------~~~~~~~~--~~~iyv~GG~~~~~~~~ 291 (429)
.. ...|.- ...-.+|+.+..+|... ..+.+++. .+.||+..+.....
T Consensus 190 ~~-------~~v~~S-----~DgG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~p--- 254 (789)
T 1sqj_A 190 AP-------QGMYVT-----HDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYPGP--- 254 (789)
T ss_dssp ST-------TCEEEE-----SSTTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEESSCSS---
T ss_pred CC-------CeEEEE-----cCCCcCcccCCCCcCccccccccccCcccccccccceeEEcCCCCeEEEEEecCCCC---
Confidence 21 122221 12345788766544432 00233322 78888874321100
Q ss_pred CCCCccccccCCeeeeCceEEeC-CCCCeEEcCCCCCC-------CCCc---c-eeEEEE---CCEEEEEcccCCCCCCc
Q 014195 292 PGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKP-------DSHI---E-FAWVLV---NNSIVIVGGTTEKHPTT 356 (429)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~~~~-------r~~~---~-~~~~~~---~~~i~v~GG~~~~~~~~ 356 (429)
.. .....+|+.+ ...+|+.+.+.+.. +... . ..+++. .+.||+.+.......
T Consensus 255 --------~~---g~~g~l~~S~DgG~tW~~~~~~~~~~~p~~~~~~~~~~~g~~~lav~p~~~~~v~~~~~~~~~~~-- 321 (789)
T 1sqj_A 255 --------WG---VTFGEVWRQNRTSGAWDDITPRVGNSSPAPYNNQTFPAGGFCGLSVDATNPNRLVVITLDRDPGP-- 321 (789)
T ss_dssp --------SC---CCCCCEEEEETTTCCEEECCCCTTTEESCCCSSCCSCCCEEEEEEEETTEEEEEEEEEECCCSCS--
T ss_pred --------CC---CCCceEEEEeCCCCceEECcCCCCccccccccccccccCceEEEEECCCCCCEEEEEEeccCCCc--
Confidence 00 0112477776 78899999864431 0011 2 223332 246777765322100
Q ss_pred cceeeeCcEEEEecCCCCeEEec
Q 014195 357 KKMVLVGEIFQFNLNTLKWHVIG 379 (429)
Q Consensus 357 ~~~~~~~~i~~yd~~~~~W~~v~ 379 (429)
....+++=+-...+|+.+.
T Consensus 322 ----~~~~l~~S~DgG~tW~~~~ 340 (789)
T 1sqj_A 322 ----ALDSIYLSTDAGATWKDVT 340 (789)
T ss_dssp ----SCCCEEEESSTTSSEEEHH
T ss_pred ----ccccEEEecCCCCCceeCc
Confidence 0124555444567898876
No 217
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=81.90 E-value=48 Score=33.80 Aligned_cols=259 Identities=18% Similarity=0.211 Sum_probs=128.1
Q ss_pred CCCeEEccCCCCCccCCcEEEE-C--CEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCC---ccceeeEEEe--
Q 014195 99 ELKWEKMKAAPVPRLDGAAIQI-K--NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREM---AHSHLGMVTD-- 170 (429)
Q Consensus 99 ~~~W~~~~~~p~~R~~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~---~r~~~~~~~~-- 170 (429)
..+|+.+..-...-.-+++++. . +.||+.. .. ..+++.+-...+|+.+.+.+... ...-.++++.
T Consensus 10 ~~~w~~~~~~~~~g~i~~i~~~p~~~~~~~~~~-~~------ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~ 82 (737)
T 2cn3_A 10 PYKWDNVVIGGGGGFMPGIVFNETEKDLIYARA-AI------GGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPV 82 (737)
T ss_dssp CEEEEEECCCSBCSCCCEEEECSSSTTCEEEEC-SS------SCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSS
T ss_pred CCeeEEcccCCCcceeeEEEECCCCCCEEEEEe-cC------CcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCC
Confidence 4578888654332122334433 2 4677633 11 13888888899999986633210 1122344443
Q ss_pred -CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCC-CCC-----CC-CCceEEEE---CCEEEEEeCCCCCCCCccc
Q 014195 171 -GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPP-LPV-----PR-YAPATQLW---RGRLHVMGGSGENRYTPEV 239 (429)
Q Consensus 171 -~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~-~p~-----~r-~~~~~~~~---~~~lyv~GG~~~~~~~~~~ 239 (429)
.+.||+..|............+++=.-.-.+|+.+.. .+. .+ ..+.+++. .+.||+-... + .
T Consensus 83 ~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~-g------~ 155 (737)
T 2cn3_A 83 DPNRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC-G------N 155 (737)
T ss_dssp STTCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST-T------C
T ss_pred CCCEEEEEecccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc-C------C
Confidence 3688987653111100002345555555678998752 211 12 22444442 2566664311 0 1
Q ss_pred cceEeeeecCCccccceeeccCCCCCC--------------CceeEEEeC----------CEEEEEcccCCCCCCCCCCC
Q 014195 240 DHWSLAVKDGKPLEKEWRTEIPIPRGG--------------PHRACVVVD----------DRLLVIGGQEGDFMAKPGSP 295 (429)
Q Consensus 240 ~~~~~~~~~~d~~~~~W~~~~~~p~~~--------------~~~~~~~~~----------~~iyv~GG~~~~~~~~~~~~ 295 (429)
..|.- +....+|+.+..+|... .+...+.++ +.||+.-....
T Consensus 156 gl~~S-----~DgG~tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~--------- 221 (737)
T 2cn3_A 156 GLWRS-----TDYGVTWSKVESFPNPGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKN--------- 221 (737)
T ss_dssp CEEEE-----SSTTSSCEECTTCCCCCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSS---------
T ss_pred cEEEe-----CCCCcceecccCCCCCcccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCC---------
Confidence 23321 13346788766554321 011222221 25665422110
Q ss_pred ccccccCCeeeeCceEEeC-CCCCeEEcCCCCCCCCCcceeEEEE-CCEEEEEcccCCCCCCccceeeeCcEEEEecCCC
Q 014195 296 IFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLV-NNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTL 373 (429)
Q Consensus 296 ~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~~~~r~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~ 373 (429)
..+|+-. ...+|+.+..+|.... .+.++.. ++.+|+..+...... .. .-...+++++-...
T Consensus 222 ------------~~v~~S~DgG~tW~~~~~~p~~~~--~~~~~~~~~~~l~~~~~d~~g~y-~~--~~~g~v~~s~d~G~ 284 (737)
T 2cn3_A 222 ------------ESIYRSTDGGVTWKAVPGQPKGLL--PHHGVLASNGMLYITYGDTCGPY-DG--NGKGQVWKFNTRTG 284 (737)
T ss_dssp ------------CCEEEESSTTSCCEECTTCCCSSE--EEEEEECTTSEEEEEEESSCCSS-CC--SCCEEEEEEETTTC
T ss_pred ------------ccEEEEcCCCCceEECCCCCCccc--ceEEEECCCCeEEEEecCCCCcc-cc--ccCceEEEEeCCCC
Confidence 0255554 6788999986654322 1222222 778888764321100 00 01237899999999
Q ss_pred CeEEecccCcc----eeeeeeEEEC----CEEEEEcc
Q 014195 374 KWHVIGKLPYR----VKTTLAGYWN----GWLYFTSG 402 (429)
Q Consensus 374 ~W~~v~~lp~~----r~~~~~~~~~----~~i~v~GG 402 (429)
+|+.+...|.. +..++.+.++ +.||+.+.
T Consensus 285 tW~~i~~~~~~~~~~~~~~~~i~v~p~~~~~ly~~~~ 321 (737)
T 2cn3_A 285 EWIDITPIPYSSSDNRFCFAGLAVDRQNPDIIMVTSM 321 (737)
T ss_dssp CEEECCSSCTTSTTCCSEEEEEEECTTCTTCEEEEEE
T ss_pred CEEEccCCCCCCcccccccccEEEcCCCCCEEEEEec
Confidence 99999776543 3333333333 67887754
No 218
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=81.69 E-value=24 Score=37.65 Aligned_cols=80 Identities=16% Similarity=0.053 Sum_probs=42.9
Q ss_pred eEE-EEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCce
Q 014195 139 HVD-IYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPA 216 (429)
Q Consensus 139 ~~~-~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~ 216 (429)
.++ +||..+.+-..+.. . ......++.. +++.++++.. ...++.+|+.+.+-..+..-........
T Consensus 359 ~l~~~~d~~~~~~~~l~~--~--~~~~~~~~~SpDG~~la~~~~--------~~~v~~~d~~tg~~~~~~~~~~~~v~~~ 426 (1045)
T 1k32_A 359 DFLGIYDYRTGKAEKFEE--N--LGNVFAMGVDRNGKFAVVAND--------RFEIMTVDLETGKPTVIERSREAMITDF 426 (1045)
T ss_dssp EEEEEEETTTCCEEECCC--C--CCSEEEEEECTTSSEEEEEET--------TSEEEEEETTTCCEEEEEECSSSCCCCE
T ss_pred ceEEEEECCCCCceEecC--C--ccceeeeEECCCCCEEEEECC--------CCeEEEEECCCCceEEeccCCCCCccce
Confidence 588 99998887766651 1 1112233332 4555555432 3478999999887666532121111222
Q ss_pred EEEECCEEEEEeCC
Q 014195 217 TQLWRGRLHVMGGS 230 (429)
Q Consensus 217 ~~~~~~~lyv~GG~ 230 (429)
+..-+++.+++++.
T Consensus 427 ~~SpDG~~la~~~~ 440 (1045)
T 1k32_A 427 TISDNSRFIAYGFP 440 (1045)
T ss_dssp EECTTSCEEEEEEE
T ss_pred EECCCCCeEEEEec
Confidence 22336665565543
No 219
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=81.37 E-value=29 Score=30.97 Aligned_cols=216 Identities=14% Similarity=0.070 Sum_probs=100.7
Q ss_pred eEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCCC--ceEeCCC-C-----C
Q 014195 139 HVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETK--KWQDLPP-L-----P 209 (429)
Q Consensus 139 ~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~--~W~~~~~-~-----p 209 (429)
.+.++|+.+.+......... -..-.++++. ++.||+.... ...+.+||+... .-..+.. . .
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~--~~~p~gia~d~~g~l~v~d~~--------~~~v~~~~~~g~~~~~~~~~~~~~~g~~~ 139 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNL--FYLPHGLSIDTDGNYWVTDVA--------LHQVFKLDPHSKEGPLLILGRSMQPGSDQ 139 (329)
T ss_dssp CEEEECTTTCCEEEEECTTT--CSSEEEEEECTTSCEEEEETT--------TTEEEEECTTCSSCCSEEESBTTBCCCST
T ss_pred cEEEEECCCCeEEeccCCCc--cCCceEEEECCCCCEEEEECC--------CCEEEEEeCCCCeEEEEEecccCCCCCCc
Confidence 58999998777543211111 1122344544 6679987532 457889998765 2222221 0 1
Q ss_pred CCCCCc-eEEEE--CCEEEEEeCCCCCCCCccccceEeeeecCCccccceeeccCC-------CCCCC-ceeEEEe-C-C
Q 014195 210 VPRYAP-ATQLW--RGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPI-------PRGGP-HRACVVV-D-D 276 (429)
Q Consensus 210 ~~r~~~-~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~-------p~~~~-~~~~~~~-~-~ 276 (429)
...... .++.. ++.|||..+... ..+.+|+ +....-...... +.... -.++++. + +
T Consensus 140 ~~~~~P~~ia~~~~~g~lyv~d~~~~----~~I~~~~-------~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g 208 (329)
T 3fvz_A 140 NHFCQPTDVAVEPSTGAVFVSDGYCN----SRIVQFS-------PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLD 208 (329)
T ss_dssp TCCSSEEEEEECTTTCCEEEEECSSC----CEEEEEC-------TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTT
T ss_pred cccCCCcEEEEeCCCCeEEEEeCCCC----CeEEEEc-------CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCC
Confidence 111122 33333 688999975311 1222222 211111111100 10001 1233333 4 7
Q ss_pred EEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCCCCCCCCCcceeEEEECCEEEEEcccCCCCCC
Q 014195 277 RLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPT 355 (429)
Q Consensus 277 ~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~ 355 (429)
.|||....+. .|..|| .+.+....-..+..... ..+++...+.+|...|...-...
T Consensus 209 ~l~v~d~~~~----------------------~I~~~~~~~G~~~~~~~~~~~~~~-~~~~~~~pg~~~~~~g~~~v~~~ 265 (329)
T 3fvz_A 209 QLCVADRENG----------------------RIQCFKTDTKEFVREIKHASFGRN-VFAISYIPGFLFAVNGKPYFGDQ 265 (329)
T ss_dssp EEEEEETTTT----------------------EEEEEETTTCCEEEEECCTTTTTC-EEEEEEETTEEEEEECCCCTTCS
T ss_pred EEEEEECCCC----------------------EEEEEECCCCcEEEEEeccccCCC-cceeeecCCEEEEeCCCEEeccC
Confidence 8999876532 377777 53444332211111111 12334445777777764321110
Q ss_pred ccceeeeCcEEEEecCCCCeEEe-cccCcce-eeeeeE-EECCEEEEEccc
Q 014195 356 TKKMVLVGEIFQFNLNTLKWHVI-GKLPYRV-KTTLAG-YWNGWLYFTSGQ 403 (429)
Q Consensus 356 ~~~~~~~~~i~~yd~~~~~W~~v-~~lp~~r-~~~~~~-~~~~~i~v~GG~ 403 (429)
....+.++|+.+.+.... +..+... .-.+++ ..++.||+....
T Consensus 266 -----~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~ 311 (329)
T 3fvz_A 266 -----EPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAH 311 (329)
T ss_dssp -----CCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESS
T ss_pred -----CCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECC
Confidence 124789999888776543 2111111 122332 235789988553
No 220
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=80.87 E-value=28 Score=30.36 Aligned_cols=172 Identities=8% Similarity=-0.014 Sum_probs=78.3
Q ss_pred eeeeecCCCcccceeeeeeecCCCCe--EEecCCCCCCCcceeeeecCCCCcCcccccccccccccCCCeEEccCCCC-C
Q 014195 35 FFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAPELKWEKMKAAPV-P 111 (429)
Q Consensus 35 ~ly~~GG~~~~~~~~~~~~yd~~~~~--~~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~ 111 (429)
.||+++..++ .+.+||+.+.. ...+.. ...+++............-...+..+|+.+++.+.+..... .
T Consensus 41 ~l~~~~~~~~-----~i~~~~~~~~~~~~~~~~~---~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~ 112 (296)
T 3e5z_A 41 AVIFSDVRQN-----RTWAWSDDGQLSPEMHPSH---HQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGK 112 (296)
T ss_dssp EEEEEEGGGT-----EEEEEETTSCEEEEESSCS---SEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTE
T ss_pred EEEEEeCCCC-----EEEEEECCCCeEEEECCCC---CcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCC
Confidence 4677665433 67889988764 222211 11122221111111111112457788887777766543211 1
Q ss_pred ---ccCCcEEEECCEEEEE----eccCC-------CCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEE
Q 014195 112 ---RLDGAAIQIKNLLYVF----AGYGS-------IDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYV 176 (429)
Q Consensus 112 ---R~~~~~~~~~~~iyv~----GG~~~-------~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv 176 (429)
+....++.-++.+|+. |.... .......+++||+. ++...+.... ....++++. ++++++
T Consensus 113 ~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~----~~~~gi~~s~dg~~lv 187 (296)
T 3e5z_A 113 KLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR----VKPNGLAFLPSGNLLV 187 (296)
T ss_dssp ECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC----SSEEEEEECTTSCEEE
T ss_pred CCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC----CCCccEEECCCCCEEE
Confidence 1112222236788886 43210 01112368999987 5554442211 112334443 455554
Q ss_pred EeCeeCCCCCCCCceeEEEeCC-CCce-E--eCCCCCCCCCCceEEE-ECCEEEEEe
Q 014195 177 VTGQYGPQCRGPTAHTFVLDTE-TKKW-Q--DLPPLPVPRYAPATQL-WRGRLHVMG 228 (429)
Q Consensus 177 ~GG~~~~~~~~~~~~~~~yd~~-t~~W-~--~~~~~p~~r~~~~~~~-~~~~lyv~G 228 (429)
.... ...+++||+. +.+. . .+-......- ..++. -+++||+..
T Consensus 188 ~~~~--------~~~i~~~~~~~~g~~~~~~~~~~~~~~~p-~~i~~d~~G~l~v~~ 235 (296)
T 3e5z_A 188 SDTG--------DNATHRYCLNARGETEYQGVHFTVEPGKT-DGLRVDAGGLIWASA 235 (296)
T ss_dssp EETT--------TTEEEEEEECSSSCEEEEEEEECCSSSCC-CSEEEBTTSCEEEEE
T ss_pred EeCC--------CCeEEEEEECCCCcCcCCCeEeeCCCCCC-CeEEECCCCCEEEEc
Confidence 4321 3578889886 4444 1 1111111111 12332 367888876
No 221
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=80.85 E-value=25 Score=30.99 Aligned_cols=135 Identities=10% Similarity=0.032 Sum_probs=61.3
Q ss_pred CCcEEEECCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCCceeE
Q 014195 114 DGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTF 193 (429)
Q Consensus 114 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~ 193 (429)
.|+++.-+++||..|-.. ..+. . + |. ..-..+..+.. -..|++++.++++|.+|-........+ ..+
T Consensus 34 ~h~~~l~~G~v~~wG~n~-~Gql-g-~----p~-~~~~~i~~ia~---G~~hs~~l~~G~v~~wG~n~~Gqlg~P-~~~- 100 (282)
T 3qhy_B 34 FHGLALKGGKVLGWGANL-NGQL-T-M----PA-ATQSGVDAIAA---GNYHSLALKDGEVIAWGGNEDGQTTVP-AEA- 100 (282)
T ss_dssp SEEEEEETTEEEEEECCS-SSTT-S-C----CG-GGGSCCCEEEE---CSSEEEEEETTEEEEEECCTTSTTCCC-GGG-
T ss_pred CeEEEEECCEEEEEeCCC-CCCC-C-C----Cc-cCCCCEEEEEe---CCCEEEEEECCEEEEeeCCCCCCCCCC-ccc-
Confidence 455655589999998432 2221 1 0 00 00011111111 234555556999999985322221100 010
Q ss_pred EEeCCCCceEeCCCCCCCCCCceEEEECCEEEEEeCCCCCCCCccccceEeeeecCCccccceeeccCCCCCCCceeEEE
Q 014195 194 VLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVV 273 (429)
Q Consensus 194 ~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~ 273 (429)
......+ . .-..|+++.-++++|.+|-.......... +... .+..+.-+ ..|+++.
T Consensus 101 -----~~~v~~i---a-~G~~hs~al~~G~v~~wG~n~~gqlg~~~-----------~~~~---~i~~i~~G-~~~~~~l 156 (282)
T 3qhy_B 101 -----RSGVDAI---A-AGAWASYALKDGKVIAWGDDSDGQTTVPA-----------EAQS---GVTALDGG-VYTALAV 156 (282)
T ss_dssp -----SSSEEEE---E-EETTEEEEEETTEEEEEECCTTSTTSCCG-----------GGGS---SEEEEEEC-SSEEEEE
T ss_pred -----CCCeEEE---E-CcCCEEEEEeCCeEEEecCCCCCcCCCCc-----------cCCC---CeEEEEcc-cCEEEEE
Confidence 0111111 1 12335554449999999854322111000 0011 11112222 2356666
Q ss_pred eCCEEEEEcccC
Q 014195 274 VDDRLLVIGGQE 285 (429)
Q Consensus 274 ~~~~iyv~GG~~ 285 (429)
-++++|.+|-..
T Consensus 157 ~~G~v~~wG~n~ 168 (282)
T 3qhy_B 157 KNGGVIAWGDNY 168 (282)
T ss_dssp ETTEEEEEECCT
T ss_pred ECCEEEEecCCC
Confidence 699999999654
No 222
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=80.59 E-value=23 Score=29.35 Aligned_cols=27 Identities=0% Similarity=-0.130 Sum_probs=20.3
Q ss_pred EEEECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeE
Q 014195 336 WVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWH 376 (429)
Q Consensus 336 ~~~~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~ 376 (429)
+...++.+|+|-|. ..|.||..+..-.
T Consensus 152 a~~~~g~~Yffkg~--------------~y~~~~~~~~~v~ 178 (195)
T 1itv_A 152 VFQFREKAYFCQDR--------------FYWRVSSRSELNQ 178 (195)
T ss_dssp EEEETTEEEEEETT--------------EEEEEECCTTCCE
T ss_pred EEEeCCeEEEEeCC--------------EEEEEECCccEEe
Confidence 35667999999875 6889998876543
No 223
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=80.40 E-value=19 Score=35.54 Aligned_cols=163 Identities=7% Similarity=-0.069 Sum_probs=75.8
Q ss_pred cceeeeecCCCcccceeeeeeecCCCCe--EEecCCCCCCCcceeeeecC---CCCcCcccccccccccccCCCeEEccC
Q 014195 33 ADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTKK---DVVPKRILPATFQDLPAPELKWEKMKA 107 (429)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~yd~~~~~--~~~p~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~~~d~~~~~W~~~~~ 107 (429)
++.+|+....++ .+..+|+.+.+ ..++.... .+++...... +..+ ....+..+|....+-+.+..
T Consensus 166 ~~~~~V~~~~~~-----~V~viD~~t~~v~~~i~~g~~--p~~v~~SpDGr~lyv~~---~dg~V~viD~~~~t~~~v~~ 235 (567)
T 1qks_A 166 ENLFSVTLRDAG-----QIALIDGSTYEIKTVLDTGYA--VHISRLSASGRYLFVIG---RDGKVNMIDLWMKEPTTVAE 235 (567)
T ss_dssp GGEEEEEETTTT-----EEEEEETTTCCEEEEEECSSC--EEEEEECTTSCEEEEEE---TTSEEEEEETTSSSCCEEEE
T ss_pred CceEEEEeCCCC-----eEEEEECCCCeEEEEEeCCCC--ccceEECCCCCEEEEEc---CCCeEEEEECCCCCCcEeEE
Confidence 567777665333 78889999987 34543111 1122221111 1111 23467778874112123333
Q ss_pred CCCCccCCcEEEE-----CC-EEEEEeccCCCCceeeeEEEEECCCCceee-CC--CCC------CCCccceeeEEEeCC
Q 014195 108 APVPRLDGAAIQI-----KN-LLYVFAGYGSIDYVHSHVDIYNFTDNTWGG-RF--DMP------REMAHSHLGMVTDGR 172 (429)
Q Consensus 108 ~p~~R~~~~~~~~-----~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-~~--~~~------~~~~r~~~~~~~~~~ 172 (429)
++....-..++.. ++ .+|+..-. .+.+.++|..+.+=.. ++ .++ .|.+|.....+..++
T Consensus 236 i~~G~~P~~ia~s~~~~pDGk~l~v~n~~------~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~ 309 (567)
T 1qks_A 236 IKIGSEARSIETSKMEGWEDKYAIAGAYW------PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYR 309 (567)
T ss_dssp EECCSEEEEEEECCSTTCTTTEEEEEEEE------TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSS
T ss_pred EecCCCCceeEEccccCCCCCEEEEEEcc------CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCC
Confidence 3321111233333 34 67776432 2357788977654322 11 111 012233333333333
Q ss_pred EEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEE
Q 014195 173 YIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQ 218 (429)
Q Consensus 173 ~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~ 218 (429)
..+++-= .....++..|..+.+...+..++..+..|...
T Consensus 310 ~~~vv~~-------~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~ 348 (567)
T 1qks_A 310 PEFIVNV-------KETGKILLVDYTDLNNLKTTEISAERFLHDGG 348 (567)
T ss_dssp SEEEEEE-------TTTTEEEEEETTCSSEEEEEEEECCSSEEEEE
T ss_pred CEEEEEe-------cCCCeEEEEecCCCccceeeeeeccccccCce
Confidence 3444311 11467888888876655554455555555443
No 224
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=80.11 E-value=34 Score=34.35 Aligned_cols=77 Identities=4% Similarity=-0.214 Sum_probs=38.8
Q ss_pred CCEEEEEeccCCCC---ceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCCceeEEEeC
Q 014195 121 KNLLYVFAGYGSID---YVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (429)
Q Consensus 121 ~~~iyv~GG~~~~~---~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~ 197 (429)
+++.++++..+... .....++++|..+.+-..+........+.......-+++.++++. ...++.+|.
T Consensus 71 Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~---------~~~i~~~~~ 141 (723)
T 1xfd_A 71 DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF---------ENNIYYCAH 141 (723)
T ss_dssp TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE---------TTEEEEESS
T ss_pred CCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEE---------CCeEEEEEC
Confidence 56656665543221 123569999999887666644332111111111122343333432 136778887
Q ss_pred CCCceEeCC
Q 014195 198 ETKKWQDLP 206 (429)
Q Consensus 198 ~t~~W~~~~ 206 (429)
.+.+-..+.
T Consensus 142 ~~g~~~~~~ 150 (723)
T 1xfd_A 142 VGKQAIRVV 150 (723)
T ss_dssp SSSCCEEEE
T ss_pred CCCceEEEe
Confidence 776655543
No 225
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=80.10 E-value=31 Score=30.47 Aligned_cols=145 Identities=10% Similarity=0.105 Sum_probs=71.3
Q ss_pred cceeeeecCCCcccceeeeeeecCCCCe-EEecCCCCCCCcceeeeecC-CCCcCccc-ccccccccccCCCeEEccCCC
Q 014195 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-IILPNNGPQKGENIGVKTKK-DVVPKRIL-PATFQDLPAPELKWEKMKAAP 109 (429)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~yd~~~~~-~~~p~~~~r~~~~~~~~~~~-~~~~~~~~-~~~~~~~d~~~~~W~~~~~~p 109 (429)
++.||+.--.. ..+.++|+.... ..+... ....+++..... ...+.... ...+..+|+.+.+.+.+..++
T Consensus 42 ~g~lyv~d~~~-----~~I~~~d~~g~~~~~~~~~--~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~ 114 (306)
T 2p4o_A 42 DGTIFVTNHEV-----GEIVSITPDGNQQIHATVE--GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLP 114 (306)
T ss_dssp TSCEEEEETTT-----TEEEEECTTCCEEEEEECS--SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECT
T ss_pred CCCEEEEeCCC-----CeEEEECCCCceEEEEeCC--CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCC
Confidence 55677765322 257889988766 322221 111222222111 11111000 113566777777777766665
Q ss_pred CCccCCcEEEE-CCEEEEEeccCCCCceeeeEEEEECCCCc---eeeCCC----CC-CCCccceeeEEEeCCEEEEEeCe
Q 014195 110 VPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNT---WGGRFD----MP-REMAHSHLGMVTDGRYIYVVTGQ 180 (429)
Q Consensus 110 ~~R~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~---W~~~~~----~~-~~~~r~~~~~~~~~~~lyv~GG~ 180 (429)
..+.....+.. ++.+|+.--. ...++++|+.+.+ |..-+. .+ ... ....++...++.||+.--
T Consensus 115 ~~~~~~g~~~~~~~~~~v~d~~------~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~-~~pngis~dg~~lyv~d~- 186 (306)
T 2p4o_A 115 DAIFLNGITPLSDTQYLTADSY------RGAIWLIDVVQPSGSIWLEHPMLARSNSESVF-PAANGLKRFGNFLYVSNT- 186 (306)
T ss_dssp TCSCEEEEEESSSSEEEEEETT------TTEEEEEETTTTEEEEEEECGGGSCSSTTCCS-CSEEEEEEETTEEEEEET-
T ss_pred CccccCcccccCCCcEEEEECC------CCeEEEEeCCCCcEeEEEECCccccccccCCC-CcCCCcCcCCCEEEEEeC-
Confidence 54443344433 4567775321 1358999987642 211110 11 111 122334455678998731
Q ss_pred eCCCCCCCCceeEEEeCCC
Q 014195 181 YGPQCRGPTAHTFVLDTET 199 (429)
Q Consensus 181 ~~~~~~~~~~~~~~yd~~t 199 (429)
..+.+++||+..
T Consensus 187 -------~~~~I~~~~~~~ 198 (306)
T 2p4o_A 187 -------EKMLLLRIPVDS 198 (306)
T ss_dssp -------TTTEEEEEEBCT
T ss_pred -------CCCEEEEEEeCC
Confidence 146899999875
No 226
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=79.96 E-value=33 Score=30.67 Aligned_cols=66 Identities=9% Similarity=-0.009 Sum_probs=41.1
Q ss_pred CEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCCceeEEEeCCCCc
Q 014195 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKK 201 (429)
Q Consensus 122 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~ 201 (429)
+.+|+++-.. ..+++||+.+++...+. .+. .....+..-++++|+.. ...+++||+.+.+
T Consensus 61 ~~l~~~d~~~------~~i~~~d~~~~~~~~~~-~~~---~v~~i~~~~dg~l~v~~----------~~gl~~~d~~~g~ 120 (326)
T 2ghs_A 61 GTAWWFNILE------RELHELHLASGRKTVHA-LPF---MGSALAKISDSKQLIAS----------DDGLFLRDTATGV 120 (326)
T ss_dssp TEEEEEEGGG------TEEEEEETTTTEEEEEE-CSS---CEEEEEEEETTEEEEEE----------TTEEEEEETTTCC
T ss_pred CEEEEEECCC------CEEEEEECCCCcEEEEE-CCC---cceEEEEeCCCeEEEEE----------CCCEEEEECCCCc
Confidence 6788876432 25899999988765442 222 11222223477887753 1358999999988
Q ss_pred eEeCCC
Q 014195 202 WQDLPP 207 (429)
Q Consensus 202 W~~~~~ 207 (429)
.+.+..
T Consensus 121 ~~~~~~ 126 (326)
T 2ghs_A 121 LTLHAE 126 (326)
T ss_dssp EEEEEC
T ss_pred EEEEee
Confidence 876643
No 227
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=79.61 E-value=27 Score=29.53 Aligned_cols=50 Identities=20% Similarity=0.233 Sum_probs=30.1
Q ss_pred ECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEE-----ec-c-cCcceeeeeeEEEC--CEEEEEcc
Q 014195 339 VNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHV-----IG-K-LPYRVKTTLAGYWN--GWLYFTSG 402 (429)
Q Consensus 339 ~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~-----v~-~-lp~~r~~~~~~~~~--~~i~v~GG 402 (429)
.++++|+|=|. ..|+||..+++-.. +. . +..+..-.++...+ +++|+|-|
T Consensus 134 ~~g~~YfFkG~--------------~ywr~d~~~~~v~~gyPr~i~~~w~g~p~~idaAf~~~~~g~~YfFkg 192 (218)
T 1gen_A 134 KNKKTYIFAGD--------------KFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKG 192 (218)
T ss_dssp TTTEEEEEETT--------------EEEEEETTTTEECSSCCEEHHHHSSSCCSSCSEEEECTTTCEEEEEET
T ss_pred CCCeEEEEECC--------------EEEEEECccccccCCCCcchhhccCCCCCCCCEEEEEcCCCcEEEEEC
Confidence 36899999774 68999987763211 11 0 01122233455554 89999977
No 228
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=79.50 E-value=19 Score=35.49 Aligned_cols=59 Identities=14% Similarity=0.138 Sum_probs=34.6
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe--CCEEEEEeCeeCCCCCCCCceeEEEeCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~ 198 (429)
++.+||....+ +.+.++|+.+++-.. .++. ...-|.+++. +..+|+.+. ...+..||+.
T Consensus 166 ~~~~~V~~~~~------~~V~viD~~t~~v~~--~i~~--g~~p~~v~~SpDGr~lyv~~~---------dg~V~viD~~ 226 (567)
T 1qks_A 166 ENLFSVTLRDA------GQIALIDGSTYEIKT--VLDT--GYAVHISRLSASGRYLFVIGR---------DGKVNMIDLW 226 (567)
T ss_dssp GGEEEEEETTT------TEEEEEETTTCCEEE--EEEC--SSCEEEEEECTTSCEEEEEET---------TSEEEEEETT
T ss_pred CceEEEEeCCC------CeEEEEECCCCeEEE--EEeC--CCCccceEECCCCCEEEEEcC---------CCeEEEEECC
Confidence 46788875432 358999998876442 2222 1122334433 557787542 3579999995
No 229
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=79.16 E-value=40 Score=31.17 Aligned_cols=193 Identities=8% Similarity=0.046 Sum_probs=101.3
Q ss_pred eEEEEECCCCceeeCCCCCCCCccceeeEEEe--CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCC--CCCCCCCC
Q 014195 139 HVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP--PLPVPRYA 214 (429)
Q Consensus 139 ~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~r~~ 214 (429)
.+.++|+.....+.+.+.. ....++++. ++.||+.-- ....++++++.....+.+. .+..|
T Consensus 97 ~I~~i~~~~~~~~~~~~~~----~~~~gl~~d~~~~~ly~~D~--------~~~~I~r~~~~g~~~~~~~~~~~~~p--- 161 (386)
T 3v65_B 97 DIRQVLPHRSEYTLLLNNL----ENAIALDFHHRRELVFWSDV--------TLDRILRANLNGSNVEEVVSTGLESP--- 161 (386)
T ss_dssp CEEEECTTSCCCEEEECSC----SCEEEEEEETTTTEEEEEET--------TTTEEEEEETTSCCEEEEECSSCSCC---
T ss_pred cceeeccCCCcEEEEecCC----CccEEEEEecCCCeEEEEeC--------CCCcEEEEecCCCCcEEEEeCCCCCc---
Confidence 4788888887766553321 223455554 689998721 1457899999887665542 22222
Q ss_pred ceEEE--ECCEEEEEeCCCCCCCCccccceEeeeecCCccccceeecc--CCCCCCCceeEEEe--CCEEEEEcccCCCC
Q 014195 215 PATQL--WRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEI--PIPRGGPHRACVVV--DDRLLVIGGQEGDF 288 (429)
Q Consensus 215 ~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~--~~p~~~~~~~~~~~--~~~iyv~GG~~~~~ 288 (429)
..+++ .++.||+.-.... .+.+.+ +....-+.+. .+..+. ++++. ++.||+.--..
T Consensus 162 ~glavd~~~g~lY~~d~~~~-----~I~~~~-------~dg~~~~~l~~~~l~~P~---giavdp~~g~ly~td~~~--- 223 (386)
T 3v65_B 162 GGLAVDWVHDKLYWTDSGTS-----RIEVAN-------LDGAHRKVLLWQSLEKPR---AIALHPMEGTIYWTDWGN--- 223 (386)
T ss_dssp CCEEEETTTTEEEEEETTTT-----EEEECB-------TTSCSCEEEECSSCSCEE---EEEEETTTTEEEEEECSS---
T ss_pred cEEEEEeCCCeEEEEcCCCC-----eEEEEe-------CCCCceEEeecCCCCCCc---EEEEEcCCCeEEEeccCC---
Confidence 23333 3789998854321 122211 2221111111 111111 33343 67899875321
Q ss_pred CCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcC--CCCCCCCCcceeEEE--ECCEEEEEcccCCCCCCccceeeeC
Q 014195 289 MAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLP--SMPKPDSHIEFAWVL--VNNSIVIVGGTTEKHPTTKKMVLVG 363 (429)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~--~~~~~r~~~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~ 363 (429)
...|++++ +...-+.+. .+..| .++++ .+++||+.-.. .+
T Consensus 224 ------------------~~~I~r~~~dG~~~~~~~~~~~~~P-----nGlavd~~~~~lY~aD~~------------~~ 268 (386)
T 3v65_B 224 ------------------TPRIEASSMDGSGRRIIADTHLFWP-----NGLTIDYAGRRMYWVDAK------------HH 268 (386)
T ss_dssp ------------------SCEEEEEETTSCSCEEEECSSCSCE-----EEEEEEGGGTEEEEEETT------------TT
T ss_pred ------------------CCEEEEEeCCCCCcEEEEECCCCCe-----eeEEEeCCCCEEEEEECC------------CC
Confidence 12378877 433333322 22222 23344 47899998532 23
Q ss_pred cEEEEecCCCCeEEec--ccCcceeeeeeEEECCEEEEEcc
Q 014195 364 EIFQFNLNTLKWHVIG--KLPYRVKTTLAGYWNGWLYFTSG 402 (429)
Q Consensus 364 ~i~~yd~~~~~W~~v~--~lp~~r~~~~~~~~~~~i~v~GG 402 (429)
.|+.+|++...-+.+. .+.. ..++++.++.||+.--
T Consensus 269 ~I~~~d~dG~~~~~~~~~~~~~---P~giav~~~~ly~td~ 306 (386)
T 3v65_B 269 VIERANLDGSHRKAVISQGLPH---PFAITVFEDSLYWTDW 306 (386)
T ss_dssp EEEEECTTSCSCEEEECSSCSS---EEEEEEETTEEEEEET
T ss_pred EEEEEeCCCCeeEEEEECCCCC---ceEEEEECCEEEEeeC
Confidence 7999998764433332 2322 3556668889998753
No 230
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=79.02 E-value=14 Score=34.58 Aligned_cols=19 Identities=16% Similarity=0.364 Sum_probs=13.6
Q ss_pred EEEEEcccCCCCCCccceeeeCcEEEEecCC
Q 014195 342 SIVIVGGTTEKHPTTKKMVLVGEIFQFNLNT 372 (429)
Q Consensus 342 ~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~ 372 (429)
.+++.|+.++ .|.+||..+
T Consensus 291 ~~l~tg~~dg------------~v~vwd~~~ 309 (430)
T 2xyi_A 291 FILATGSADK------------TVALWDLRN 309 (430)
T ss_dssp TEEEEEETTS------------EEEEEETTC
T ss_pred CEEEEEeCCC------------eEEEEeCCC
Confidence 4788887643 578888876
No 231
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=78.71 E-value=43 Score=31.89 Aligned_cols=47 Identities=13% Similarity=0.235 Sum_probs=29.9
Q ss_pred CCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeE-----Ee----cccCcceeeeeeEEECCEEEEEcc
Q 014195 340 NNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWH-----VI----GKLPYRVKTTLAGYWNGWLYFTSG 402 (429)
Q Consensus 340 ~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~-----~v----~~lp~~r~~~~~~~~~~~i~v~GG 402 (429)
++++|+|=|. ..|+||..+++-. .+ +.+| ..--+++..++++|+|-|
T Consensus 367 ~~k~yfFkG~--------------~yw~yd~~~~~~~~gYPk~I~~~fpgip--~~iDAA~~~~g~~YFFkg 422 (450)
T 1su3_A 367 TGKTYFFVAN--------------KYWRYDEYKRSMDPGYPKMIAHDFPGIG--HKVDAVFMKDGFFYFFHG 422 (450)
T ss_dssp TTEEEEEETT--------------EEEEEETTTTEECSSCSEEHHHHSTTSC--SCCSEEEEETTEEEEEET
T ss_pred CCeEEEEeCC--------------EEEEEeCCCccccCCCCcchhhcCCCCC--CCccEEEEcCCeEEEEeC
Confidence 5899999774 6899997654321 11 1122 122345567899999977
No 232
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=77.38 E-value=68 Score=32.84 Aligned_cols=100 Identities=11% Similarity=0.128 Sum_probs=52.2
Q ss_pred ccccccccCCCeEEccCCCCCccCCcEEE-ECCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCC---CCCc-ccee
Q 014195 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQ-IKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMP---REMA-HSHL 165 (429)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~R~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~---~~~~-r~~~ 165 (429)
.+..||+.+++++.....+....-.++.. -++.|+|.. .. +-+++||+.+++++.....+ ...+ ..-.
T Consensus 194 Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt-~~------~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~ 266 (795)
T 4a2l_A 194 GLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVAT-EG------AGLFLINPKTKEIKNYLHSPSNPKSISSNYIR 266 (795)
T ss_dssp CEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEE-BS------SCEEEEETTTTEEEEECCCTTCTTSCSCSBEE
T ss_pred CEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEE-CC------CCeEEEeCCCCeEEEeecCCCCccccCCCeEE
Confidence 34566666666665532221111111222 256777743 11 12789999998887653221 1111 1122
Q ss_pred eEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCC
Q 014195 166 GMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPP 207 (429)
Q Consensus 166 ~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~ 207 (429)
++... ++.|+|-. ..-+.+||+.+.++.....
T Consensus 267 ~i~~d~~g~lWigt----------~~Gl~~~~~~~~~~~~~~~ 299 (795)
T 4a2l_A 267 SLAMDSQNRLWIGT----------FNDLNIYHEGTDSFASYSS 299 (795)
T ss_dssp EEEECTTSCEEEEE----------SSCEEEEETTTTEEEEECC
T ss_pred EEEEcCCCCEEEEe----------CChhheEcCCCCeEEEEec
Confidence 33333 56777642 1257889999999987753
No 233
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=76.96 E-value=35 Score=30.30 Aligned_cols=82 Identities=15% Similarity=0.061 Sum_probs=43.6
Q ss_pred cEEEE--CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCC--CCccceeeEEEe--CCEEEEEeCeeCCCC----
Q 014195 116 AAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPR--EMAHSHLGMVTD--GRYIYVVTGQYGPQC---- 185 (429)
Q Consensus 116 ~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~--~~~r~~~~~~~~--~~~lyv~GG~~~~~~---- 185 (429)
+++.. ++.|||.-.. ..+.+||+.+++.+.+..... +. ..-..+++. ++.||+.-.......
T Consensus 84 gi~~~~~~g~l~v~d~~-------~~i~~~d~~~g~~~~~~~~~~~~~~-~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~ 155 (322)
T 2fp8_A 84 DISYNLQNNQLYIVDCY-------YHLSVVGSEGGHATQLATSVDGVPF-KWLYAVTVDQRTGIVYFTDVSTLYDDRGVQ 155 (322)
T ss_dssp EEEEETTTTEEEEEETT-------TEEEEECTTCEECEEEESEETTEEC-SCEEEEEECTTTCCEEEEESCSSCCTTCHH
T ss_pred eEEEcCCCCcEEEEECC-------CCEEEEeCCCCEEEEecccCCCCcc-cccceEEEecCCCEEEEECCcccccccccc
Confidence 34444 5789987432 127789988776655432211 11 122334444 578998632110000
Q ss_pred -----CCCCceeEEEeCCCCceEeC
Q 014195 186 -----RGPTAHTFVLDTETKKWQDL 205 (429)
Q Consensus 186 -----~~~~~~~~~yd~~t~~W~~~ 205 (429)
......+++||+.+.+.+.+
T Consensus 156 ~~~~~~~~~g~v~~~d~~~~~~~~~ 180 (322)
T 2fp8_A 156 QIMDTSDKTGRLIKYDPSTKETTLL 180 (322)
T ss_dssp HHHHHTCCCEEEEEEETTTTEEEEE
T ss_pred eehcccCCCceEEEEeCCCCEEEEe
Confidence 01135799999988776543
No 234
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=76.43 E-value=18 Score=30.91 Aligned_cols=50 Identities=12% Similarity=0.153 Sum_probs=31.5
Q ss_pred ECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEE----ec-ccCc------ceeeeeeEE--ECCEEEEEcc
Q 014195 339 VNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHV----IG-KLPY------RVKTTLAGY--WNGWLYFTSG 402 (429)
Q Consensus 339 ~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~----v~-~lp~------~r~~~~~~~--~~~~i~v~GG 402 (429)
.++++|+|-|. ..|+||..+++... +. .+|. +..-.++.. .++++|+|-|
T Consensus 126 ~~gk~yfFkG~--------------~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG 188 (225)
T 3oyo_A 126 KGKEVYLFKGN--------------KYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG 188 (225)
T ss_dssp STTEEEEEETT--------------EEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET
T ss_pred CCCcEEEEeCC--------------eEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC
Confidence 36899999874 68999977765543 11 1221 222234444 3789999987
No 235
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=76.32 E-value=49 Score=33.53 Aligned_cols=51 Identities=10% Similarity=0.027 Sum_probs=31.0
Q ss_pred CCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEEecccCc-ceeeeeeEEECCEEEEEcc
Q 014195 340 NNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIGKLPY-RVKTTLAGYWNGWLYFTSG 402 (429)
Q Consensus 340 ~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v~~lp~-~r~~~~~~~~~~~i~v~GG 402 (429)
+++||+.-... +.|+++|++...-+.+...+. .....++++.++.||+.-.
T Consensus 551 ~~~LY~aD~~~------------~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~ 602 (699)
T 1n7d_A 551 SGRLYWVDSKL------------HSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDI 602 (699)
T ss_dssp TCCEEEEETTT------------TEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECS
T ss_pred CCEEEEEecCC------------CeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeC
Confidence 57899876432 378999987654444433211 1233566667788888753
No 236
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=75.98 E-value=46 Score=30.22 Aligned_cols=81 Identities=7% Similarity=-0.108 Sum_probs=40.1
Q ss_pred eEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCC--CCc
Q 014195 139 HVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPR--YAP 215 (429)
Q Consensus 139 ~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r--~~~ 215 (429)
.+.++|+.+.+-........ . -.+++.. ++++++.++ ...+.+++..+..-.......... ...
T Consensus 158 ~i~iwd~~~~~~~~~~~~~~--~--V~~v~fspdg~~l~s~s---------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 224 (365)
T 4h5i_A 158 IMRIIDPSDLTEKFEIETRG--E--VKDLHFSTDGKVVAYIT---------GSSLEVISTVTGSCIARKTDFDKNWSLSK 224 (365)
T ss_dssp EEEEEETTTTEEEEEEECSS--C--CCEEEECTTSSEEEEEC---------SSCEEEEETTTCCEEEEECCCCTTEEEEE
T ss_pred EEEEeECCCCcEEEEeCCCC--c--eEEEEEccCCceEEecc---------ceeEEEEEeccCcceeeeecCCCCCCEEE
Confidence 47889998876544322111 1 1233332 556666654 234566777666544322211111 111
Q ss_pred eEEEECCEEEEEeCCCC
Q 014195 216 ATQLWRGRLHVMGGSGE 232 (429)
Q Consensus 216 ~~~~~~~~lyv~GG~~~ 232 (429)
....-+++.++.++.+.
T Consensus 225 v~fspdg~~l~~~s~d~ 241 (365)
T 4h5i_A 225 INFIADDTVLIAASLKK 241 (365)
T ss_dssp EEEEETTEEEEEEEESS
T ss_pred EEEcCCCCEEEEEecCC
Confidence 22234788888876553
No 237
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=75.79 E-value=42 Score=29.61 Aligned_cols=112 Identities=8% Similarity=-0.043 Sum_probs=59.9
Q ss_pred CCCeEEccCCCCCccCCcEEEE-CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEE
Q 014195 99 ELKWEKMKAAPVPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYV 176 (429)
Q Consensus 99 ~~~W~~~~~~p~~R~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv 176 (429)
....+.+..+|....-..++.- ++.||+.--. ...+++||+... .......+. .-+++++. +++||+
T Consensus 19 ~~~~~~~~~~p~~~~pegia~~~~g~lyv~d~~------~~~I~~~d~~g~-~~~~~~~~~----~p~gia~~~dG~l~v 87 (306)
T 2p4o_A 19 LAPAKIITSFPVNTFLENLASAPDGTIFVTNHE------VGEIVSITPDGN-QQIHATVEG----KVSGLAFTSNGDLVA 87 (306)
T ss_dssp CCCEEEEEEECTTCCEEEEEECTTSCEEEEETT------TTEEEEECTTCC-EEEEEECSS----EEEEEEECTTSCEEE
T ss_pred CCCceEeEeCCCCCCcceEEECCCCCEEEEeCC------CCeEEEECCCCc-eEEEEeCCC----CceeEEEcCCCcEEE
Confidence 3445555566554433444442 5678887532 134889998764 332222221 23444444 567888
Q ss_pred EeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEE-ECCEEEEE
Q 014195 177 VTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQL-WRGRLHVM 227 (429)
Q Consensus 177 ~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~~~lyv~ 227 (429)
...... ...++++|+.+.+.+.+...+..+.....+. .++.+|+.
T Consensus 88 ad~~~~------~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~ 133 (306)
T 2p4o_A 88 TGWNAD------SIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTA 133 (306)
T ss_dssp EEECTT------SCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEE
T ss_pred EeccCC------cceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEE
Confidence 742110 1258889988888776655544443333332 24456665
No 238
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=75.01 E-value=35 Score=28.31 Aligned_cols=47 Identities=19% Similarity=0.274 Sum_probs=28.1
Q ss_pred CCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeE-----Eec---ccCcceeeeeeEEE-CC-EEEEEcc
Q 014195 340 NNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWH-----VIG---KLPYRVKTTLAGYW-NG-WLYFTSG 402 (429)
Q Consensus 340 ~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~-----~v~---~lp~~r~~~~~~~~-~~-~i~v~GG 402 (429)
++++|+|=|. ..|+||..+++-. .+. .+| ..-.++... ++ ++|+|-|
T Consensus 109 ~g~~yfFkG~--------------~yw~yd~~~~~v~~gyPk~i~~~~gip--~~idaAf~~~~~~~~YfFkg 165 (196)
T 3c7x_A 109 NGKTYFFRGN--------------KYYRFNEELRAVDSEYPKNIKVWEGIP--ESPRGSFMGSDEVFTYFYKG 165 (196)
T ss_dssp TTEEEEEETT--------------EEEEEETTTTEECTTCSEEGGGSBTCC--SSCSEEEECTTSSEEEEEET
T ss_pred CCEEEEEECC--------------EEEEEeCCcccccCCCCccHHHCCCcC--CCcceeEEecCCCEEEEEEC
Confidence 6899999774 6899998775321 111 122 122334444 44 8999977
No 239
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=74.99 E-value=38 Score=32.27 Aligned_cols=28 Identities=14% Similarity=0.231 Sum_probs=21.0
Q ss_pred EEEECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEE
Q 014195 336 WVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHV 377 (429)
Q Consensus 336 ~~~~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~ 377 (429)
++..++++|+|=|. ..|+||..+.+-..
T Consensus 410 A~~~~g~~YFFkg~--------------~ywr~d~~~~~v~~ 437 (450)
T 1su3_A 410 VFMKDGFFYFFHGT--------------RQYKFDPKTKRILT 437 (450)
T ss_dssp EEEETTEEEEEETT--------------EEEEEETTTTEEEE
T ss_pred EEEcCCeEEEEeCC--------------EEEEEECCcceEec
Confidence 35578999999875 68999988766443
No 240
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=74.88 E-value=79 Score=32.37 Aligned_cols=198 Identities=15% Similarity=0.194 Sum_probs=94.0
Q ss_pred cccccCCCeEEccC-C-----CC---CccCCcEEEE----CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCC-CCCC
Q 014195 94 DLPAPELKWEKMKA-A-----PV---PRLDGAAIQI----KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFD-MPRE 159 (429)
Q Consensus 94 ~~d~~~~~W~~~~~-~-----p~---~R~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~-~~~~ 159 (429)
.-+....+|+++.. + +. .........+ .+.+|+..|.-........+++=+-.-.+|+++.. .+.+
T Consensus 47 ~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~ 126 (763)
T 3a0f_A 47 RWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQWDPWAAFLVSDDRGKTFKQYRSPVPMG 126 (763)
T ss_dssp EEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTTTCSCCEEEEESSTTSSCEEEECSSCCC
T ss_pred EECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccccCCCCceEEEECCCCCCceeccCCcccC
Confidence 33445568988765 3 21 1122222222 35788876531111111224444444668998742 1110
Q ss_pred ---Cccc-eeeEEEe---CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCC---CCceEEEE----CCEEE
Q 014195 160 ---MAHS-HLGMVTD---GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPR---YAPATQLW----RGRLH 225 (429)
Q Consensus 160 ---~~r~-~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r---~~~~~~~~----~~~ly 225 (429)
..|. ...+++. .+.+|+.+- ...+++=+-.-.+|+++..++... .....+.+ .+.||
T Consensus 127 ~~~~g~~~~~~l~v~p~~~~~v~a~~~---------~~~l~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~ 197 (763)
T 3a0f_A 127 ANDMGRNGGERLAVNPHWTDELWFGSR---------TQGLWRSTDRAQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTAY 197 (763)
T ss_dssp TTSTTTTSBCCEEECTTSTTCEEEECS---------SSCEEEESSTTSSCEECTTSCCCSCTTTCEEEEEECSSSTTCEE
T ss_pred ccccCccccceEEECCCCCCEEEEEeC---------CCcEEEECCCCcCccccccCcccCCCccceEEEEECCCCCCEEE
Confidence 1122 1234443 367787531 234554444457899998766432 12222232 24677
Q ss_pred EEeCCCCCCCCccccceEeeeecCCccccceeeccCCCC--------------------CCCceeEEEe-CCEEEEEccc
Q 014195 226 VMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPR--------------------GGPHRACVVV-DDRLLVIGGQ 284 (429)
Q Consensus 226 v~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~--------------------~~~~~~~~~~-~~~iyv~GG~ 284 (429)
+.....+ ..|.- +..-.+|+.+...|. ....+.++.. ++.||+....
T Consensus 198 ~~~~~~g-------~v~~S-----~DgG~tW~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~l~~~~~~ 265 (763)
T 3a0f_A 198 VASHAVG-------GLWVT-----WDGGANWSQVGGQPTQWSDWTKSIVAASGTAIQSSGPLPIKIALGKNGRLYITYSD 265 (763)
T ss_dssp EEESSTT-------CEEEE-----SSSSSSCEECTTCCCSCCHHHHHHHHHHCCCCSSSSCEEEEEEECTTSCEEEEEES
T ss_pred EEEeCCC-------eEEEE-----CCCCCCccccCCCccccccccccccccccccccCCCCcceeEEECCCCcEEEEecc
Confidence 7644221 12221 133557887665442 1121222222 6778887421
Q ss_pred CCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCCCC
Q 014195 285 EGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMP 326 (429)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~~ 326 (429)
..... ......+|+.+ ...+|+.+.+.+
T Consensus 266 ~~~~~--------------~~~~g~v~rS~D~G~tW~~~~~~~ 294 (763)
T 3a0f_A 266 APGPW--------------GVLYGEVWSYDPTNGNWKHITPSR 294 (763)
T ss_dssp SCSSS--------------CCCCEEEEEEETTTTEEEECCTTS
T ss_pred CCCCC--------------CCcceeEEEEeCCCCceEECCCCC
Confidence 10000 00112478887 788999987644
No 241
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=74.21 E-value=48 Score=29.54 Aligned_cols=198 Identities=9% Similarity=0.002 Sum_probs=98.4
Q ss_pred eEEEEECCCCceeeCCCCCCCCccceeeEEEe--CCEEEEEeCeeCCCCCCCCceeEEEeCCC----CceEeC-C-CCCC
Q 014195 139 HVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTET----KKWQDL-P-PLPV 210 (429)
Q Consensus 139 ~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t----~~W~~~-~-~~p~ 210 (429)
.+.++|+.+.+...+-+. -..-.++++. +++||+.--. ...++++|+.+ ..-+.+ . .+..
T Consensus 11 ~I~~i~~~~~~~~~~~~~----~~~p~g~~~d~~~~~ly~~D~~--------~~~I~~~~~~g~~~~~~~~~~~~~~~~~ 78 (316)
T 1ijq_A 11 EVRKMTLDRSEYTSLIPN----LRNVVALDTEVASNRIYWSDLS--------QRMICSTQLDRAHGVSSYDTVISRDIQA 78 (316)
T ss_dssp SEEEEETTSCCCEEEECS----CSSEEEEEEETTTTEEEEEETT--------TTEEEEEEC--------CEEEECSSCSC
T ss_pred eEEEEECCCcceEehhcC----CCceEEEEEEeCCCEEEEEECC--------CCcEEEEECCCCCCCcccEEEEeCCCCC
Confidence 478889888876654221 1223555554 6799998431 45788999876 222222 1 2222
Q ss_pred CCCCceEEE--ECCEEEEEeCCCCCCCCccccceEeeeecCCccccceeecc--CCCCCCCceeEEE--eCCEEEEEccc
Q 014195 211 PRYAPATQL--WRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEI--PIPRGGPHRACVV--VDDRLLVIGGQ 284 (429)
Q Consensus 211 ~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~--~~p~~~~~~~~~~--~~~~iyv~GG~ 284 (429)
| ..+++ .+++||+.-... ..+.+++ +....-+.+. .+..++ .+++ .++.||+..-.
T Consensus 79 p---~glavd~~~~~ly~~d~~~-----~~I~~~~-------~~g~~~~~~~~~~~~~P~---~iavdp~~g~ly~~d~~ 140 (316)
T 1ijq_A 79 P---DGLAVDWIHSNIYWTDSVL-----GTVSVAD-------TKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWG 140 (316)
T ss_dssp C---CEEEEETTTTEEEEEETTT-----TEEEEEE-------TTSSSEEEEEECTTCCEE---EEEEETTTTEEEEEECS
T ss_pred c---CEEEEeecCCeEEEEECCC-----CEEEEEe-------CCCCceEEEEECCCCCcc---eEEeCCCCCEEEEEccC
Confidence 2 34444 478999984322 1222222 2221111111 122222 3344 37889987532
Q ss_pred CCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCCCCCCCCCcceeEEEE--CCEEEEEcccCCCCCCccceee
Q 014195 285 EGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLV--NNSIVIVGGTTEKHPTTKKMVL 361 (429)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~~~~r~~~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~ 361 (429)
. ...+++++ +...-+.+.... ... ..++++- +++||+.-..+
T Consensus 141 ~---------------------~~~I~~~~~dG~~~~~~~~~~--~~~-P~gla~d~~~~~lY~~D~~~----------- 185 (316)
T 1ijq_A 141 T---------------------PAKIKKGGLNGVDIYSLVTEN--IQW-PNGITLDLLSGRLYWVDSKL----------- 185 (316)
T ss_dssp S---------------------SCEEEEEETTSCCEEEEECSS--CSC-EEEEEEETTTTEEEEEETTT-----------
T ss_pred C---------------------CCeEEEEcCCCCCeEEEEECC--CCC-ceEEEEeccCCEEEEEECCC-----------
Confidence 1 01377776 443333332111 111 1233443 67999886432
Q ss_pred eCcEEEEecCCCCeEEecccC-cceeeeeeEEECCEEEEEcc
Q 014195 362 VGEIFQFNLNTLKWHVIGKLP-YRVKTTLAGYWNGWLYFTSG 402 (429)
Q Consensus 362 ~~~i~~yd~~~~~W~~v~~lp-~~r~~~~~~~~~~~i~v~GG 402 (429)
+.|+.+|++...-+.+.... ......++++.++.||+.--
T Consensus 186 -~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~ 226 (316)
T 1ijq_A 186 -HSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDI 226 (316)
T ss_dssp -TEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEET
T ss_pred -CeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEEC
Confidence 37999998765444442211 11233556667888888753
No 242
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=74.13 E-value=31 Score=34.93 Aligned_cols=121 Identities=21% Similarity=0.216 Sum_probs=63.3
Q ss_pred eEEEECCEEEEEeCCCCCCCCccccceEeeeecCCccccceeeccCCCCC--------CCceeEEEeCCEEEEEcccCCC
Q 014195 216 ATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRG--------GPHRACVVVDDRLLVIGGQEGD 287 (429)
Q Consensus 216 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--------~~~~~~~~~~~~iyv~GG~~~~ 287 (429)
+-++.+++||+..... .+..++. ......|+.....+.. ....+.++.+++||+.... +
T Consensus 65 ~P~v~~g~vyv~~~~~------~v~AlD~-----~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~d-g- 131 (689)
T 1yiq_A 65 TPIVVDGVMYTTGPFS------VVYALDA-----RDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLD-G- 131 (689)
T ss_dssp CCEEETTEEEEECGGG------CEEEEET-----TTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT-S-
T ss_pred cCEEECCEEEEEcCCC------eEEEEEC-----CCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccC-C-
Confidence 3456799999985421 1222221 1334557764332210 1112446678888886532 1
Q ss_pred CCCCCCCCccccccCCeeeeCceEEeC-CC--CCeEEcCC-CCCCCCCcceeEEEECCEEEEEcccCCCCCCccceeeeC
Q 014195 288 FMAKPGSPIFKCSRRNEVVYDDVYMLD-DE--MKWKVLPS-MPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVG 363 (429)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~--~~W~~~~~-~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~ 363 (429)
.++.+| .+ ..|+.-.. -+........+-++.++.+|+-.+..... ...
T Consensus 132 ---------------------~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~-------~~g 183 (689)
T 1yiq_A 132 ---------------------RLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFG-------VRG 183 (689)
T ss_dssp ---------------------EEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTC-------CBC
T ss_pred ---------------------EEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccC-------CCC
Confidence 378887 43 45886543 11111222223466788887743322111 134
Q ss_pred cEEEEecCCCC--eEE
Q 014195 364 EIFQFNLNTLK--WHV 377 (429)
Q Consensus 364 ~i~~yd~~~~~--W~~ 377 (429)
.++.||+++.+ |+.
T Consensus 184 ~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 184 YVTAYDAETGKEAWRF 199 (689)
T ss_dssp EEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCcEEEEe
Confidence 79999998764 865
No 243
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=73.15 E-value=51 Score=29.35 Aligned_cols=96 Identities=15% Similarity=0.146 Sum_probs=52.5
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCC-------CCCCccceeeEEEe-C-CEEEEEeCeeCCCCCCCCce
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDM-------PREMAHSHLGMVTD-G-RYIYVVTGQYGPQCRGPTAH 191 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~-------~~~~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~ 191 (429)
++.|||..+.. ...+.+||+....-..+... +... ..-.++++. + +.|||.... ...
T Consensus 154 ~g~lyv~d~~~-----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~-~~p~gia~d~~~g~l~v~d~~--------~~~ 219 (329)
T 3fvz_A 154 TGAVFVSDGYC-----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQF-SVPHSLALVPHLDQLCVADRE--------NGR 219 (329)
T ss_dssp TCCEEEEECSS-----CCEEEEECTTSCEEEEECEECCSSSCCTTEE-SCEEEEEEETTTTEEEEEETT--------TTE
T ss_pred CCeEEEEeCCC-----CCeEEEEcCCCCEEEEeccCCCCCCCCCccc-CCCcEEEEECCCCEEEEEECC--------CCE
Confidence 57899987521 23588999654433333211 1111 123455554 3 799998532 457
Q ss_pred eEEEeCCCCceEeCCCC-CCCCCCceEEEECCEEEEEeCC
Q 014195 192 TFVLDTETKKWQDLPPL-PVPRYAPATQLWRGRLHVMGGS 230 (429)
Q Consensus 192 ~~~yd~~t~~W~~~~~~-p~~r~~~~~~~~~~~lyv~GG~ 230 (429)
+.+||+.+.+....-.. .....-.+++...+.+|+..|.
T Consensus 220 I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~ 259 (329)
T 3fvz_A 220 IQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGK 259 (329)
T ss_dssp EEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECC
T ss_pred EEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCC
Confidence 99999987665443211 1222222334444777877775
No 244
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=71.81 E-value=30 Score=29.44 Aligned_cols=19 Identities=5% Similarity=0.221 Sum_probs=16.0
Q ss_pred ECCEEEEEcccCCCCCCccceeeeCcEEEEecC
Q 014195 339 VNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLN 371 (429)
Q Consensus 339 ~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~ 371 (429)
.++++|+|=|. ..|+||..
T Consensus 179 ~~g~~YfFkG~--------------~ywr~d~~ 197 (225)
T 3oyo_A 179 KEPEAYLFKGQ--------------NYVRIDFT 197 (225)
T ss_dssp STTEEEEEETT--------------EEEEEECC
T ss_pred CCCEEEEEECC--------------EEEEEeCC
Confidence 37899999875 68999988
No 245
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=71.22 E-value=89 Score=31.38 Aligned_cols=81 Identities=6% Similarity=-0.108 Sum_probs=41.3
Q ss_pred ECCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCC---CCccceeeEEE-eCCEEEEEeCeeCCCCCCCCceeEEE
Q 014195 120 IKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPR---EMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVL 195 (429)
Q Consensus 120 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~---~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~y 195 (429)
-++++|.+--..+. ....+++.+....+|+.+-+... .....-.+.+. -+++.++++...+... ...++++
T Consensus 82 dG~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~---~~~i~v~ 156 (710)
T 2xdw_A 82 KGKRYFYFYNTGLQ--NQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSD---WVTIKFM 156 (710)
T ss_dssp ETTEEEEEEECSSC--SSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCS---CEEEEEE
T ss_pred ECCEEEEEEEcCCc--eEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCc---eEEEEEE
Confidence 35566654322222 12357888887778875532211 00001112222 2555555544332221 3589999
Q ss_pred eCCCCceEeC
Q 014195 196 DTETKKWQDL 205 (429)
Q Consensus 196 d~~t~~W~~~ 205 (429)
|+.+.+....
T Consensus 157 d~~tg~~~~~ 166 (710)
T 2xdw_A 157 KVDGAKELPD 166 (710)
T ss_dssp ETTTTEEEEE
T ss_pred ECCCCCCCcc
Confidence 9999987653
No 246
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=70.44 E-value=45 Score=27.61 Aligned_cols=21 Identities=24% Similarity=0.412 Sum_probs=16.2
Q ss_pred CC-EEEEEcccCCCCCCccceeeeCcEEEEecCCCC
Q 014195 340 NN-SIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLK 374 (429)
Q Consensus 340 ~~-~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~ 374 (429)
++ ++|+|=|. ..|+||..+.+
T Consensus 156 ~~~~~YfFkg~--------------~y~r~d~~~~~ 177 (196)
T 3c7x_A 156 DEVFTYFYKGN--------------KYWKFNNQKLK 177 (196)
T ss_dssp TSSEEEEEETT--------------EEEEEETTTTE
T ss_pred CCCEEEEEECC--------------EEEEEECCcce
Confidence 44 89999774 68999987764
No 247
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=68.96 E-value=62 Score=28.62 Aligned_cols=81 Identities=14% Similarity=0.117 Sum_probs=42.5
Q ss_pred eEEEEECCCCceeeCCCCCC----------------CCccceeeEEEe--CCEEEEEeCeeCCCCCCCCceeEEEeCCCC
Q 014195 139 HVDIYNFTDNTWGGRFDMPR----------------EMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (429)
Q Consensus 139 ~~~~yd~~~~~W~~~~~~~~----------------~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 200 (429)
.+.+||+.+++++....... +....-+++++. ++.|||.-. ...+.++|+.+.
T Consensus 41 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~---------~~~i~~~d~~~g 111 (322)
T 2fp8_A 41 RVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC---------YYHLSVVGSEGG 111 (322)
T ss_dssp EEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET---------TTEEEEECTTCE
T ss_pred eEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC---------CCCEEEEeCCCC
Confidence 47888888876654321100 000123456665 578998732 234788998877
Q ss_pred ceEeCCCCCC--C-CCCceEEE-E-CCEEEEEe
Q 014195 201 KWQDLPPLPV--P-RYAPATQL-W-RGRLHVMG 228 (429)
Q Consensus 201 ~W~~~~~~p~--~-r~~~~~~~-~-~~~lyv~G 228 (429)
+.+.+..... + .....+++ - ++.||+.-
T Consensus 112 ~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d 144 (322)
T 2fp8_A 112 HATQLATSVDGVPFKWLYAVTVDQRTGIVYFTD 144 (322)
T ss_dssp ECEEEESEETTEECSCEEEEEECTTTCCEEEEE
T ss_pred EEEEecccCCCCcccccceEEEecCCCEEEEEC
Confidence 6555432111 1 11122333 2 57888874
No 248
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=68.90 E-value=75 Score=29.55 Aligned_cols=91 Identities=14% Similarity=0.119 Sum_probs=48.2
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCCceeEEEeCCCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 200 (429)
++.||+....+ ..+.++|+.+++-..+..... ..+.++...++.||+.... + ...++++|+.+.
T Consensus 141 ~g~lyv~d~~~------~~I~~id~~~g~~~~~~~~~~---~~~ia~~~~g~~l~~~d~~-~------~~~I~~~d~~~~ 204 (409)
T 3hrp_A 141 NNTVLAYQRDD------PRVRLISVDDNKVTTVHPGFK---GGKPAVTKDKQRVYSIGWE-G------THTVYVYMKASG 204 (409)
T ss_dssp TTEEEEEETTT------TEEEEEETTTTEEEEEEETCC---BCBCEECTTSSEEEEEBSS-T------TCEEEEEEGGGT
T ss_pred CCCEEEEecCC------CcEEEEECCCCEEEEeeccCC---CCceeEecCCCcEEEEecC-C------CceEEEEEcCCC
Confidence 57899986521 358899999877665433221 1123333335567776431 1 127889998765
Q ss_pred ce-EeCCCC-C-CCCCCceEEEE--CCEEEEE
Q 014195 201 KW-QDLPPL-P-VPRYAPATQLW--RGRLHVM 227 (429)
Q Consensus 201 ~W-~~~~~~-p-~~r~~~~~~~~--~~~lyv~ 227 (429)
.- ..+... + ....-+.++.. ++.||+.
T Consensus 205 ~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~ 236 (409)
T 3hrp_A 205 WAPTRIGQLGSTFSGKIGAVALDETEEWLYFV 236 (409)
T ss_dssp TCEEEEEECCTTSCSCCCBCEECTTSSEEEEE
T ss_pred ceeEEeeeccchhcCCcEEEEEeCCCCeEEEE
Confidence 32 233111 1 11222333333 6889994
No 249
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=67.17 E-value=1.2e+02 Score=31.11 Aligned_cols=203 Identities=16% Similarity=0.239 Sum_probs=103.7
Q ss_pred EEEEECCCCceeeCCC-C-----CCC--CccceeeEEEe---CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCC-C
Q 014195 140 VDIYNFTDNTWGGRFD-M-----PRE--MAHSHLGMVTD---GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP-P 207 (429)
Q Consensus 140 ~~~yd~~~~~W~~~~~-~-----~~~--~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~-~ 207 (429)
+++-+-...+|+.+.. + +.. ....-+++++. .+.+|+..|..... .....+++=+-.-.+|+++. +
T Consensus 45 v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~~--~~~~~i~~S~DgG~TW~~~~~~ 122 (763)
T 3a0f_A 45 TYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQW--DPWAAFLVSDDRGKTFKQYRSP 122 (763)
T ss_dssp EEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTTT--CSCCEEEEESSTTSSCEEEECS
T ss_pred EEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccccC--CCCceEEEECCCCCCceeccCC
Confidence 6777777889998865 3 210 11223444443 36889876532211 11345555555567899875 2
Q ss_pred CC-----CCCCC-ceEEEE---CCEEEEEeCCCCCCCCccccceEeeeecCCccccceeeccCCCCCC---CceeEEEe-
Q 014195 208 LP-----VPRYA-PATQLW---RGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGG---PHRACVVV- 274 (429)
Q Consensus 208 ~p-----~~r~~-~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~---~~~~~~~~- 274 (429)
.+ ..|.. ..+++. .+.+|+.+- . ...|.- +..-.+|+.+..++... .....+.+
T Consensus 123 ~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~-~-------~~l~~S-----~DgG~TW~~~~~~~~~~~~~~~~~~i~~~ 189 (763)
T 3a0f_A 123 VPMGANDMGRNGGERLAVNPHWTDELWFGSR-T-------QGLWRS-----TDRAQTWSRMNQLPDSSTYGIGIISVIFD 189 (763)
T ss_dssp SCCCTTSTTTTSBCCEEECTTSTTCEEEECS-S-------SCEEEE-----SSTTSSCEECTTSCCCSCTTTCEEEEEEC
T ss_pred cccCccccCccccceEEECCCCCCEEEEEeC-C-------CcEEEE-----CCCCcCccccccCcccCCCccceEEEEEC
Confidence 21 12321 234443 367777641 1 223332 13457898877665421 22222222
Q ss_pred ---CCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCCCCCC------------------CCCc
Q 014195 275 ---DDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKP------------------DSHI 332 (429)
Q Consensus 275 ---~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~~~~------------------r~~~ 332 (429)
.+.||+.....+ .+|+-+ ...+|+.+...+.. ....
T Consensus 190 p~~~~~~~~~~~~~g----------------------~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 247 (763)
T 3a0f_A 190 PKNVGTAYVASHAVG----------------------GLWVTWDGGANWSQVGGQPTQWSDWTKSIVAASGTAIQSSGPL 247 (763)
T ss_dssp SSSTTCEEEEESSTT----------------------CEEEESSSSSSCEECTTCCCSCCHHHHHHHHHHCCCCSSSSCE
T ss_pred CCCCCEEEEEEeCCC----------------------eEEEECCCCCCccccCCCccccccccccccccccccccCCCCc
Confidence 245776543211 156554 67789998754421 1111
Q ss_pred ceeEEE-ECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEEecccCc
Q 014195 333 EFAWVL-VNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIGKLPY 383 (429)
Q Consensus 333 ~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v~~lp~ 383 (429)
.+.+++ .++.+|+........ ... ....+++.+-...+|+.+.++|.
T Consensus 248 ~~~~~~~~~g~l~~~~~~~~~~-~~~---~~g~v~rS~D~G~tW~~~~~~~~ 295 (763)
T 3a0f_A 248 PIKIALGKNGRLYITYSDAPGP-WGV---LYGEVWSYDPTNGNWKHITPSRE 295 (763)
T ss_dssp EEEEEECTTSCEEEEEESSCSS-SCC---CCEEEEEEETTTTEEEECCTTSS
T ss_pred ceeEEECCCCcEEEEeccCCCC-CCC---cceeEEEEeCCCCceEECCCCCC
Confidence 112222 267888875321000 000 02378888888899999876554
No 250
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=66.80 E-value=60 Score=27.69 Aligned_cols=171 Identities=9% Similarity=-0.022 Sum_probs=82.9
Q ss_pred cceeeeecCCCcccceeeeeeecCCCCe-EEecCCCCCCCcceeeee-cCCCCcCcccccccccccccCCCeEEccC--C
Q 014195 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-IILPNNGPQKGENIGVKT-KKDVVPKRILPATFQDLPAPELKWEKMKA--A 108 (429)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~yd~~~~~-~~~p~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~W~~~~~--~ 108 (429)
++.||+.-... +.+.++|+.... ..+.........+++... +....-.+.....+..++.....-+.+.. +
T Consensus 47 ~~~ly~~d~~~-----~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~ 121 (267)
T 1npe_A 47 DKVVYWTDISE-----PSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGL 121 (267)
T ss_dssp TTEEEEEETTT-----TEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC
T ss_pred CCEEEEEECCC-----CEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCC
Confidence 56788765432 367888887765 322221111112333321 11111111123445555554432222221 1
Q ss_pred CCCccCCcEEEE--CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe--CCEEEEEeCeeCCC
Q 014195 109 PVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQ 184 (429)
Q Consensus 109 p~~R~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~ 184 (429)
..| ..++.- ++.||+...... ...++++++....-+.+..... ..-.++++. +++||+.--.
T Consensus 122 ~~P---~~i~vd~~~g~lyv~~~~~~----~~~I~~~~~dg~~~~~~~~~~~---~~P~gia~d~~~~~lyv~d~~---- 187 (267)
T 1npe_A 122 VNP---RGIVTDPVRGNLYWTDWNRD----NPKIETSHMDGTNRRILAQDNL---GLPNGLTFDAFSSQLCWVDAG---- 187 (267)
T ss_dssp SSE---EEEEEETTTTEEEEEECCSS----SCEEEEEETTSCCCEEEECTTC---SCEEEEEEETTTTEEEEEETT----
T ss_pred CCc---cEEEEeeCCCEEEEEECCCC----CcEEEEEecCCCCcEEEEECCC---CCCcEEEEcCCCCEEEEEECC----
Confidence 222 233333 578999753211 2358888886544333322111 223445554 5789987321
Q ss_pred CCCCCceeEEEeCCCCceEeC-CCCCCCCCCceEEEECCEEEEEeC
Q 014195 185 CRGPTAHTFVLDTETKKWQDL-PPLPVPRYAPATQLWRGRLHVMGG 229 (429)
Q Consensus 185 ~~~~~~~~~~yd~~t~~W~~~-~~~p~~r~~~~~~~~~~~lyv~GG 229 (429)
.+.++++|+.+..-..+ ..+..| ..++.-++.||+.-.
T Consensus 188 ----~~~I~~~~~~g~~~~~~~~~~~~P---~gi~~d~~~lyva~~ 226 (267)
T 1npe_A 188 ----THRAECLNPAQPGRRKVLEGLQYP---FAVTSYGKNLYYTDW 226 (267)
T ss_dssp ----TTEEEEEETTEEEEEEEEECCCSE---EEEEEETTEEEEEET
T ss_pred ----CCEEEEEecCCCceEEEecCCCCc---eEEEEeCCEEEEEEC
Confidence 46899999976432222 222223 345566889999753
No 251
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=66.76 E-value=1e+02 Score=30.33 Aligned_cols=75 Identities=23% Similarity=0.388 Sum_probs=47.3
Q ss_pred CcEEEECCEEEEEeccCCCCceeeeEEEEECCCCc--eeeCCCCCCCC-c---cceeeEEEeCCEEEEEeCeeCCCCCCC
Q 014195 115 GAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREM-A---HSHLGMVTDGRYIYVVTGQYGPQCRGP 188 (429)
Q Consensus 115 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~-~---r~~~~~~~~~~~lyv~GG~~~~~~~~~ 188 (429)
.+-++.++.||+.... +.++++|.++.+ |+.-...+... + ....+.++.+++||+...
T Consensus 62 ~~P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~--------- 125 (582)
T 1flg_A 62 SQAIVSDGVIYVTASY-------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL--------- 125 (582)
T ss_dssp CCCEEETTEEEEEETT-------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET---------
T ss_pred eccEEECCEEEEEcCC-------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC---------
Confidence 3446679999997653 138899998775 87643322100 0 012344567899987532
Q ss_pred CceeEEEeCCCCc--eEeC
Q 014195 189 TAHTFVLDTETKK--WQDL 205 (429)
Q Consensus 189 ~~~~~~yd~~t~~--W~~~ 205 (429)
...++.+|.+|.+ |+.-
T Consensus 126 dg~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 126 DASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp TTEEEEEESSSCCEEEEEE
T ss_pred CCEEEEEECCCCCEEeeec
Confidence 3578999998875 8763
No 252
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=66.73 E-value=2.5 Score=39.24 Aligned_cols=52 Identities=8% Similarity=0.040 Sum_probs=26.4
Q ss_pred EEEeCCEEEEEeCeeCCCCCCCCceeEEEeCCCCc--eEeCCCCCCCCCCceEEEECCEEEEEeCCC
Q 014195 167 MVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKK--WQDLPPLPVPRYAPATQLWRGRLHVMGGSG 231 (429)
Q Consensus 167 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~ 231 (429)
.++.++.||+.+. ...++++|..+.+ |+.-. . ....+.+..++++|+.+..+
T Consensus 5 P~v~~~~v~~gs~---------dg~v~a~d~~tG~~~W~~~~--~--~~~s~p~~~~g~~~v~~s~d 58 (369)
T 2hz6_A 5 VTLPETLLFVSTL---------DGSLHAVSKRTGSIKWTLKE--D--PVLQVPTHVEEPAFLPDPND 58 (369)
T ss_dssp ---CTTEEEEEET---------TSEEEEEETTTCCEEEEEEC--C--CSCCCC-----CCEEECTTT
T ss_pred CeeeCCEEEEEcC---------CCEEEEEECCCCCEEEEecC--C--CceecceEcCCCEEEEeCCC
Confidence 4556777776542 3468899988764 77643 1 11122344567788876543
No 253
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=66.69 E-value=79 Score=29.03 Aligned_cols=29 Identities=21% Similarity=0.132 Sum_probs=19.5
Q ss_pred EEECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEE
Q 014195 337 VLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHV 377 (429)
Q Consensus 337 ~~~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~ 377 (429)
...+++.++.|+.++ .|.+||..+.+-..
T Consensus 350 ~s~~~~~l~s~s~dg------------~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 350 WNGSDSVVMTGSYNN------------FFRMFDRNTKRDIT 378 (447)
T ss_dssp ECTTSSEEEEECSTT------------EEEEEETTTCCEEE
T ss_pred ECCCCCEEEEeccCC------------EEEEEEcCCCccee
Confidence 344666677777643 68888988876544
No 254
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=64.68 E-value=1.2e+02 Score=30.55 Aligned_cols=133 Identities=14% Similarity=0.136 Sum_probs=63.8
Q ss_pred eeEEEEECCCCcee--eCCCCCCCCccceeeEEE-eCCEEEEEeCeeCCCCCCCCceeEEEeCCCC--c-eEeCCCCCCC
Q 014195 138 SHVDIYNFTDNTWG--GRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTETK--K-WQDLPPLPVP 211 (429)
Q Consensus 138 ~~~~~yd~~~~~W~--~~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~--~-W~~~~~~p~~ 211 (429)
..+++++..+.+-. .+...+.. +....++.. -+++..++...+... ..++++.+|..+. + |..+.+-...
T Consensus 243 ~~v~~~~lgt~~~~~~lv~~~~~~-~~~~~~~~~SpDG~~l~~~~~~~~~---~~~~l~~~d~~~~~~~~~~~l~~~~~~ 318 (741)
T 1yr2_A 243 QTVWLHRLGTPQSADQPVFATPEL-PKRGHGASVSSDGRWVVITSSEGTD---PVNTVHVARVTNGKIGPVTALIPDLKA 318 (741)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTC-TTCEEEEEECTTSCEEEEEEECTTC---SCCEEEEEEEETTEECCCEEEECSSSS
T ss_pred CEEEEEECCCCchhCEEEeccCCC-CeEEEEEEECCCCCEEEEEEEccCC---CcceEEEEECCCCCCcccEEecCCCCc
Confidence 35888888766531 22222211 112223322 345433333322211 1578999999887 6 8777543222
Q ss_pred CCCceEEEECCEEEEEeCCCCCCCCccccceEeeeecCCccc--cceeeccCCCCCCCceeEEEeCCEEEEEcccC
Q 014195 212 RYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLE--KEWRTEIPIPRGGPHRACVVVDDRLLVIGGQE 285 (429)
Q Consensus 212 r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~--~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~ 285 (429)
... .+...++.||+..-.+. .....|... ..+ ..|+.+.+-..... ..+...++.|++....+
T Consensus 319 ~~~-~~~~dg~~l~~~s~~~~----~~~~l~~~d-----~~~~~~~~~~l~~~~~~~l-~~~~~~~~~lv~~~~~d 383 (741)
T 1yr2_A 319 QWD-FVDGVGDQLWFVSGDGA----PLKKIVRVD-----LSGSTPRFDTVVPESKDNL-ESVGIAGNRLFASYIHD 383 (741)
T ss_dssp CEE-EEEEETTEEEEEECTTC----TTCEEEEEE-----CSSSSCEEEEEECCCSSEE-EEEEEEBTEEEEEEEET
T ss_pred eEE-EEeccCCEEEEEECCCC----CCCEEEEEe-----CCCCccccEEEecCCCCeE-EEEEEECCEEEEEEEEC
Confidence 211 12245677877754321 112222221 333 46887654332221 13344578887776554
No 255
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=63.69 E-value=94 Score=28.83 Aligned_cols=111 Identities=7% Similarity=-0.049 Sum_probs=56.3
Q ss_pred cceeeeecCCCcccceeeeeeecCCCCe--EEecC-CCCCCCcceeeeecC-CCCcCc-------ccccccccccccCCC
Q 014195 33 ADFFWASSSKFTSSYLNIASNWSPYHNS--IILPN-NGPQKGENIGVKTKK-DVVPKR-------ILPATFQDLPAPELK 101 (429)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~yd~~~~~--~~~p~-~~~r~~~~~~~~~~~-~~~~~~-------~~~~~~~~~d~~~~~ 101 (429)
++.+|+.-.... ...+.+..+|+.+.+ -.+|- ..| .+.+..-.+. |..... ...+.+..+|..+.+
T Consensus 44 ~~~vyV~~~~~~-~~~~~V~ViD~~t~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~ 120 (386)
T 3sjl_D 44 ARRVYVNDPAHF-AAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL 120 (386)
T ss_dssp TTEEEEEECGGG-CSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCEEEEEcCccc-CCCCEEEEEECCCCeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe
Confidence 456788765311 113689999999999 44443 222 1222111111 111110 123568888988876
Q ss_pred eEEccCCCC-Cc-----cCCcEEEE--CCEEEEEeccCCCCceeeeEEEEECCCCcee
Q 014195 102 WEKMKAAPV-PR-----LDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWG 151 (429)
Q Consensus 102 W~~~~~~p~-~R-----~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~ 151 (429)
-..--+++. +| .-+.++.. +.++||..... .+.+.+.|..+++=.
T Consensus 121 v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~-----~~~VsVID~~t~~vv 173 (386)
T 3sjl_D 121 PTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP-----APAVGVVDLEGKAFK 173 (386)
T ss_dssp EEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSS-----SCEEEEEETTTTEEE
T ss_pred EEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCC-----CCeEEEEECCCCcEE
Confidence 432112221 12 22334433 44788864211 245889999888643
No 256
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=62.06 E-value=92 Score=28.16 Aligned_cols=195 Identities=7% Similarity=0.025 Sum_probs=101.9
Q ss_pred eEEEEECCCCceeeCCCCCCCCccceeeEEEe--CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCC--CCCCCCCC
Q 014195 139 HVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP--PLPVPRYA 214 (429)
Q Consensus 139 ~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~r~~ 214 (429)
.+.++++.....+.+.+-. ..-.++++. ++.||+.-- ....++++++....-+.+. .+..|
T Consensus 54 ~I~~i~~~g~~~~~~~~~~----~~~~~l~~d~~~~~ly~~D~--------~~~~I~r~~~~g~~~~~~~~~~~~~p--- 118 (349)
T 3v64_C 54 DIRQVLPHRSEYTLLLNNL----ENAIALDFHHRRELVFWSDV--------TLDRILRANLNGSNVEEVVSTGLESP--- 118 (349)
T ss_dssp CEEEECTTSCCEEEEECSC----SCEEEEEEETTTTEEEEEET--------TTTEEEEEETTSCSCEEEECSSCSCC---
T ss_pred ceEEEeCCCCeeEEeecCC----CceEEEEEeccccEEEEEec--------cCCceEEEecCCCCceEEEeCCCCCc---
Confidence 4778888887776653221 123445543 689998731 1457899999887655542 22222
Q ss_pred ceEEE--ECCEEEEEeCCCCCCCCccccceEeeeecCCccccceeecc--CCCCCCCceeEEEe--CCEEEEEcccCCCC
Q 014195 215 PATQL--WRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEI--PIPRGGPHRACVVV--DDRLLVIGGQEGDF 288 (429)
Q Consensus 215 ~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~--~~p~~~~~~~~~~~--~~~iyv~GG~~~~~ 288 (429)
..+++ .++.||+.-... ..+.+.+ .....-+.+. .+..++ .+++. ++.||+..-..
T Consensus 119 ~glavd~~~g~ly~~d~~~-----~~I~~~~-------~dG~~~~~l~~~~l~~P~---~iavdp~~g~ly~td~~~--- 180 (349)
T 3v64_C 119 GGLAVDWVHDKLYWTDSGT-----SRIEVAN-------LDGAHRKVLLWQSLEKPR---AIALHPMEGTIYWTDWGN--- 180 (349)
T ss_dssp CEEEEETTTTEEEEEETTT-----TEEEEEE-------TTSCSCEEEECTTCSCEE---EEEEETTTTEEEEEECSS---
T ss_pred cEEEEecCCCeEEEEcCCC-----CeEEEEc-------CCCCceEEEEeCCCCCcc---eEEEecCcCeEEEeccCC---
Confidence 23343 378999885432 1222222 2221111111 122221 33443 68899875332
Q ss_pred CCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCCCCCCCCCcceeEEE--ECCEEEEEcccCCCCCCccceeeeCcE
Q 014195 289 MAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVL--VNNSIVIVGGTTEKHPTTKKMVLVGEI 365 (429)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~~~~r~~~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~i 365 (429)
...|++++ +...-+.+..-. ... ..++++ .+++||+.-.. .+.|
T Consensus 181 ------------------~~~I~r~~~dG~~~~~~~~~~--~~~-PnGla~d~~~~~lY~aD~~------------~~~I 227 (349)
T 3v64_C 181 ------------------TPRIEASSMDGSGRRIIADTH--LFW-PNGLTIDYAGRRMYWVDAK------------HHVI 227 (349)
T ss_dssp ------------------SCEEEEEETTSCSCEESCCSS--CSC-EEEEEEETTTTEEEEEETT------------TTEE
T ss_pred ------------------CCEEEEEeCCCCCcEEEEECC--CCC-cceEEEeCCCCEEEEEECC------------CCEE
Confidence 12478887 444334432211 111 123344 36899998532 2379
Q ss_pred EEEecCCCCeEEec--ccCcceeeeeeEEECCEEEEEcc
Q 014195 366 FQFNLNTLKWHVIG--KLPYRVKTTLAGYWNGWLYFTSG 402 (429)
Q Consensus 366 ~~yd~~~~~W~~v~--~lp~~r~~~~~~~~~~~i~v~GG 402 (429)
+.+|++...=+.+. .+.. -.++++.++.||+.--
T Consensus 228 ~~~~~dG~~~~~~~~~~~~~---P~giav~~~~ly~td~ 263 (349)
T 3v64_C 228 ERANLDGSHRKAVISQGLPH---PFAITVFEDSLYWTDW 263 (349)
T ss_dssp EEEETTSCSCEEEECSSCSS---EEEEEEETTEEEEEET
T ss_pred EEEeCCCCceEEEEeCCCCC---ceEEEEECCEEEEecC
Confidence 99998765433332 2322 3556668899998754
No 257
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=61.47 E-value=88 Score=27.77 Aligned_cols=19 Identities=11% Similarity=0.295 Sum_probs=11.6
Q ss_pred CCEEEEEeCCCCCCCCccccceEe
Q 014195 221 RGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 221 ~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
++.+.+.|+.+ ..+..|++
T Consensus 87 ~~~~l~s~s~D-----~~v~lwd~ 105 (343)
T 2xzm_R 87 ENCFAISSSWD-----KTLRLWDL 105 (343)
T ss_dssp STTEEEEEETT-----SEEEEEET
T ss_pred CCCEEEEEcCC-----CcEEEEEC
Confidence 45666677655 35667763
No 258
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=60.41 E-value=90 Score=27.51 Aligned_cols=62 Identities=11% Similarity=-0.022 Sum_probs=34.5
Q ss_pred eeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCC
Q 014195 136 VHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPL 208 (429)
Q Consensus 136 ~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~ 208 (429)
....++++|..+.+-..+ . . ....... +++.+++........ ...++.+|..+.+...+...
T Consensus 41 ~~~~l~~~d~~~~~~~~l----~---~-~~~~~~SpDg~~la~~~~~~~~~---~~~l~~~~~~~g~~~~l~~~ 103 (347)
T 2gop_A 41 YENTIVIENLKNNARRFI----E---N-ATMPRISPDGKKIAFMRANEEKK---VSEIWVADLETLSSKKILEA 103 (347)
T ss_dssp EEEEEEEEETTTCCEEEE----E---S-CEEEEECTTSSEEEEEEEETTTT---EEEEEEEETTTTEEEEEEEE
T ss_pred ccceEEEEeCCCCceEEc----c---c-CCCeEECCCCCEEEEEEeccCCC---cceEEEEECCCCceEEEEcC
Confidence 356799999998876555 1 1 1122222 443333333222111 45799999998877766443
No 259
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=59.25 E-value=83 Score=27.54 Aligned_cols=57 Identities=12% Similarity=0.094 Sum_probs=30.1
Q ss_pred eeeEEEeCCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEEECCEEEEEeCCC
Q 014195 164 HLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSG 231 (429)
Q Consensus 164 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~ 231 (429)
.|++++.++.+|.+|-........+.. + ......++ .-..|+++.-++++|.+|-..
T Consensus 151 ~~~~~l~~G~v~~wG~n~~gqlg~p~~-~------~~~v~~i~----~G~~hs~al~~G~v~~wG~n~ 207 (282)
T 3qhy_B 151 YTALAVKNGGVIAWGDNYFGQTTVPAE-A------QSGVDDVA----GGIFHSLALKDGKVIAWGDNR 207 (282)
T ss_dssp SEEEEEETTEEEEEECCTTSTTSCCGG-G------GSSEEEEE----ECSSEEEEEETTEEEEEECCT
T ss_pred CEEEEEECCEEEEecCCCCCCCCCcee-c------CCCeEEEE----ecCCEEEEEECCeEEEEECCC
Confidence 456666689999998543222110000 0 11122221 234466665789999998543
No 260
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=58.05 E-value=1.2e+02 Score=28.32 Aligned_cols=124 Identities=14% Similarity=0.075 Sum_probs=71.3
Q ss_pred CeEE--ccCCCCCccCCcEEEECCEEEEEeccCCCCceeeeEEEEECCCCce--------eeCCCCCCCCccceeeEEEe
Q 014195 101 KWEK--MKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTW--------GGRFDMPREMAHSHLGMVTD 170 (429)
Q Consensus 101 ~W~~--~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W--------~~~~~~~~~~~r~~~~~~~~ 170 (429)
.|++ ++.+|..-.-|+.+.+++.-|++|=.+++-.+..--..|=+ +.| ++++.--. ..-+..++-..
T Consensus 271 pW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs--~~~~sp~~~vrr~i~sey~-~~AsEPCvkyY 347 (670)
T 3ju4_A 271 PWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFP--DAFNSPSNYVRRQIPSEYE-PDASEPCIKYY 347 (670)
T ss_dssp CCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEET--TTTTCTTCCEEEECCGGGC-TTEEEEEEEEE
T ss_pred CceecccccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEec--ccccCCcceeeeechhhhc-cccccchhhhh
Confidence 4543 44455555668899998877888866554332211122221 222 22322211 12345667778
Q ss_pred CCEEEEEe-CeeCCCCCCCCceeEEEeCCCCceEeCC-CCCCCCCCceEEEECCEEEEEeCC
Q 014195 171 GRYIYVVT-GQYGPQCRGPTAHTFVLDTETKKWQDLP-PLPVPRYAPATQLWRGRLHVMGGS 230 (429)
Q Consensus 171 ~~~lyv~G-G~~~~~~~~~~~~~~~yd~~t~~W~~~~-~~p~~r~~~~~~~~~~~lyv~GG~ 230 (429)
++.||+.- |..+.. +-+.+.+-+.....|+.+. +-..-....-.+..++.||+||-.
T Consensus 348 dgvLyLtTRgt~~~~---~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgsE 406 (670)
T 3ju4_A 348 DGVLYLITRGTRGDR---LGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGSE 406 (670)
T ss_dssp TTEEEEEEEESCTTS---CCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEEC
T ss_pred CCEEEEEecCcCCCC---CcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEecc
Confidence 99999984 322222 2467888888889999874 222222333456789999999854
No 261
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=57.74 E-value=1.6e+02 Score=29.69 Aligned_cols=47 Identities=17% Similarity=0.237 Sum_probs=27.3
Q ss_pred eCCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEEECCEEEEE
Q 014195 170 DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVM 227 (429)
Q Consensus 170 ~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~ 227 (429)
.++.|||-. ..-+.+||+.++++....... ...-.+++..++.|+|.
T Consensus 72 ~~g~lWigT----------~~Gl~~yd~~~~~f~~~~~~~-~~~i~~i~~~~g~lWig 118 (758)
T 3ott_A 72 DNTYLYMGT----------DNGILVYNYRADRYEQPETDF-PTDVRTMALQGDTLWLG 118 (758)
T ss_dssp TTTEEEEEE----------TTEEEEEETTTTEECCCSCCC-CSCEEEEEEETTEEEEE
T ss_pred CCCcEEEEe----------CCCeEEEeCCCCEEECcccCC-CceEEEEEecCCcEEEE
Confidence 367888752 235789999998886521111 11112233457888875
No 262
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=57.43 E-value=25 Score=31.44 Aligned_cols=141 Identities=6% Similarity=-0.063 Sum_probs=65.8
Q ss_pred ceeeeecCCCcccceeeeeeecCCCCe-EEecCCCCCCCcceeeeecC-CCCcCcccccccccccccCCCeEEccCCCCC
Q 014195 34 DFFWASSSKFTSSYLNIASNWSPYHNS-IILPNNGPQKGENIGVKTKK-DVVPKRILPATFQDLPAPELKWEKMKAAPVP 111 (429)
Q Consensus 34 ~~ly~~GG~~~~~~~~~~~~yd~~~~~-~~~p~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 111 (429)
+.+|+++... ..+.+||+.++. ..+... ..-.++...... ...+. ...+..+|+.+.+.+.+...+..
T Consensus 61 ~~l~~~d~~~-----~~i~~~d~~~~~~~~~~~~--~~v~~i~~~~dg~l~v~~---~~gl~~~d~~~g~~~~~~~~~~~ 130 (326)
T 2ghs_A 61 GTAWWFNILE-----RELHELHLASGRKTVHALP--FMGSALAKISDSKQLIAS---DDGLFLRDTATGVLTLHAELESD 130 (326)
T ss_dssp TEEEEEEGGG-----TEEEEEETTTTEEEEEECS--SCEEEEEEEETTEEEEEE---TTEEEEEETTTCCEEEEECSSTT
T ss_pred CEEEEEECCC-----CEEEEEECCCCcEEEEECC--CcceEEEEeCCCeEEEEE---CCCEEEEECCCCcEEEEeeCCCC
Confidence 4556554332 367889998877 333221 111112111111 11111 23477888888887766543221
Q ss_pred ----ccCCcEEEECCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe--CCEEEEEeCeeCCCC
Q 014195 112 ----RLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQC 185 (429)
Q Consensus 112 ----R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~ 185 (429)
+.....+.-++.+|+.............+++|| +.+...+..- . ....+++.. ++.+|+....
T Consensus 131 ~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~-~---~~~~~i~~s~dg~~lyv~~~~----- 199 (326)
T 2ghs_A 131 LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFAD-I---SIPNSICFSPDGTTGYFVDTK----- 199 (326)
T ss_dssp CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEE-E---SSEEEEEECTTSCEEEEEETT-----
T ss_pred CCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCC-C---cccCCeEEcCCCCEEEEEECC-----
Confidence 111112222567777432211111234688998 4555543210 0 112234433 3467776321
Q ss_pred CCCCceeEEEeCC
Q 014195 186 RGPTAHTFVLDTE 198 (429)
Q Consensus 186 ~~~~~~~~~yd~~ 198 (429)
...+++||..
T Consensus 200 ---~~~I~~~d~~ 209 (326)
T 2ghs_A 200 ---VNRLMRVPLD 209 (326)
T ss_dssp ---TCEEEEEEBC
T ss_pred ---CCEEEEEEcc
Confidence 3578888875
No 263
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=54.78 E-value=1.4e+02 Score=27.96 Aligned_cols=193 Identities=13% Similarity=0.233 Sum_probs=93.3
Q ss_pred CCceee--CCCCCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCCceeEE-EeCC-----CCc-eEeCCC-CCCCCCCce
Q 014195 147 DNTWGG--RFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFV-LDTE-----TKK-WQDLPP-LPVPRYAPA 216 (429)
Q Consensus 147 ~~~W~~--~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~-yd~~-----t~~-W~~~~~-~p~~r~~~~ 216 (429)
...|+. ++.+|. ...-|+.+.+++.=|++|=.+++-. -.++-. |-+. ... =+.++. ....-+..+
T Consensus 269 ~spW~~t~L~~i~~--vTe~HSFa~i~~~~fa~GyHnGDv~---PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPC 343 (670)
T 3ju4_A 269 KSPWRKTDLGLIPS--VTEVHSFATIDNNGFAMGYHQGDVA---PREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPC 343 (670)
T ss_dssp TSCCEEEECCSCTT--CSEEEEEEECSSSCEEEEEEECSSS---SCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEE
T ss_pred cCCceecccccccc--eeeeeeeeEecCCceEEEeccCCCC---cceeeEEEecccccCCcceeeeechhhhccccccch
Confidence 344643 344443 5667899999888889986666543 233222 2111 111 122221 222223445
Q ss_pred EEEECCEEEEEe-CCCCCCCCccccceEeeeecCCccccceeeccC-CCCCCCceeEEEeCCEEEEEcccCCCCCCCCCC
Q 014195 217 TQLWRGRLHVMG-GSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIP-IPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGS 294 (429)
Q Consensus 217 ~~~~~~~lyv~G-G~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~-~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 294 (429)
+-.+++.||+.- |......-....+- +...+.|..+.- -..-....-.+..++.||+||-......-+.+.
T Consensus 344 vkyYdgvLyLtTRgt~~~~~GS~L~rs-------~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgsERA~nEWE~G~ 416 (670)
T 3ju4_A 344 IKYYDGVLYLITRGTRGDRLGSSLHRS-------RDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGSERAENEWEAGA 416 (670)
T ss_dssp EEEETTEEEEEEEESCTTSCCCEEEEE-------SSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEECSSTTCSSTTC
T ss_pred hhhhCCEEEEEecCcCCCCCcceeeee-------cccCCchhheeccccccccCCCcceeCCEEEEEeccccccccccCC
Confidence 557899999986 44332222222211 234566776422 122222334578899999999775544333333
Q ss_pred Ccccccc-CCeeeeCceEE--eC-CCCCeEEcCCC----CCCCCCcce-eEEEECCEE-EEEcccCC
Q 014195 295 PIFKCSR-RNEVVYDDVYM--LD-DEMKWKVLPSM----PKPDSHIEF-AWVLVNNSI-VIVGGTTE 351 (429)
Q Consensus 295 ~~~~~~~-~~~~~~~~v~~--~d-~~~~W~~~~~~----~~~r~~~~~-~~~~~~~~i-~v~GG~~~ 351 (429)
++..+.. ....++..+-. .. +.-+|..+.+- ....+..+. ++++.++-| |||||++.
T Consensus 417 pD~RY~a~yPRtF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgEd~ 483 (670)
T 3ju4_A 417 PDDRYKASYPRTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGEDH 483 (670)
T ss_dssp CCCCSSCBCCEEEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEBCS
T ss_pred CcccccccCCceEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCccc
Confidence 3211111 11222211111 11 34577776531 122222222 346667755 67888765
No 264
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=53.79 E-value=1.4e+02 Score=27.61 Aligned_cols=195 Identities=9% Similarity=0.032 Sum_probs=97.7
Q ss_pred eEEEEECCCCceeeCCCCCCCCccceeeEEEe--CCEEEEEeCeeCCCCCCCCceeEEEeCCCC----ceEeC-C-CCCC
Q 014195 139 HVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTETK----KWQDL-P-PLPV 210 (429)
Q Consensus 139 ~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~----~W~~~-~-~~p~ 210 (429)
++.+.|+....++.+.+- .+.-.++++. +++||+.-- . ...++++++... ....+ . .+..
T Consensus 93 ~I~~i~l~~~~~~~~~~~----~~~~~~l~~d~~~~~lywsD~---~-----~~~I~~~~~~g~~~~~~~~~~~~~~~~~ 160 (400)
T 3p5b_L 93 EVRKMTLDRSEYTSLIPN----LRNVVALDTEVASNRIYWSDL---S-----QRMICSTQLDRAHGVSSYDTVISRDIQA 160 (400)
T ss_dssp EEEEECTTSCSCEEEECS----CSCEEEEEEETTTTEEEEEET---T-----TTEEEEEEC------CCCEEEECSSCSC
T ss_pred eeEEEccCCcceeEeccc----cCcceEEeeeeccCceEEEec---C-----CCeEEEEEcccCCCCCcceEEEeCCCCC
Confidence 578888888877765321 1223455554 689998722 1 357888888752 22222 2 2221
Q ss_pred CCCCceEEE--ECCEEEEEeCCCCCCCCccccceEeeeecCCccccceeecc--CCCCCCCceeEEE--eCCEEEEEccc
Q 014195 211 PRYAPATQL--WRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEI--PIPRGGPHRACVV--VDDRLLVIGGQ 284 (429)
Q Consensus 211 ~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~--~~p~~~~~~~~~~--~~~~iyv~GG~ 284 (429)
-..+++ .+++||+.-.... .+.+.+ +....-+.+. .+..++ ++++ .++.||+.--.
T Consensus 161 ---p~glavD~~~~~lY~~d~~~~-----~I~~~~-------~~g~~~~~l~~~~~~~P~---~iavdp~~g~ly~td~~ 222 (400)
T 3p5b_L 161 ---PDGLAVDWIHSNIYWTDSVLG-----TVSVAD-------TKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWG 222 (400)
T ss_dssp ---EEEEEEETTTTEEEEEETTTT-----EEEEEC-------TTTCSEEEEEECSSCCEE---EEEEETTTTEEEEEECS
T ss_pred ---cccEEEEecCCceEEEECCCC-----eEEEEe-------CCCCceEEEEeCCCCCcc---eEEEecccCeEEEEeCC
Confidence 123333 3789999854321 122221 2222222221 122221 3344 36889987521
Q ss_pred CCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEc-C-CCCCCCCCcceeEEEE--CCEEEEEcccCCCCCCccce
Q 014195 285 EGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVL-P-SMPKPDSHIEFAWVLV--NNSIVIVGGTTEKHPTTKKM 359 (429)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~-~-~~~~~r~~~~~~~~~~--~~~i~v~GG~~~~~~~~~~~ 359 (429)
.. ..|++++ +...-+.+ . .+..| .++++- +++||+.-..
T Consensus 223 ~~---------------------~~I~~~~~dG~~~~~~~~~~l~~P-----~glavd~~~~~lY~aD~~---------- 266 (400)
T 3p5b_L 223 TP---------------------AKIKKGGLNGVDIYSLVTENIQWP-----NGITLDLLSGRLYWVDSK---------- 266 (400)
T ss_dssp SS---------------------CCEEEEETTSCSCEEEECSSCSCE-----EEEEEETTTTEEEEEETT----------
T ss_pred CC---------------------CEEEEEeCCCCccEEEEECCCCce-----EEEEEEeCCCEEEEEECC----------
Confidence 10 1367776 43222222 2 22222 233443 6799998532
Q ss_pred eeeCcEEEEecCCCCeEEecccC-cceeeeeeEEECCEEEEEc
Q 014195 360 VLVGEIFQFNLNTLKWHVIGKLP-YRVKTTLAGYWNGWLYFTS 401 (429)
Q Consensus 360 ~~~~~i~~yd~~~~~W~~v~~lp-~~r~~~~~~~~~~~i~v~G 401 (429)
.+.|+.+|.+...-+.+...+ .-....++++.++.||+.-
T Consensus 267 --~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd 307 (400)
T 3p5b_L 267 --LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTD 307 (400)
T ss_dssp --TTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEE
T ss_pred --CCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEec
Confidence 237999998865444442211 1123356677889999875
No 265
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=53.54 E-value=2e+02 Score=29.50 Aligned_cols=193 Identities=10% Similarity=0.065 Sum_probs=95.7
Q ss_pred eEEEEECCCCceeeCCCCCCCCccceeeEEEe--CCEEEEEeCeeCCCCCCCCceeEEEeCCCC----ceEe-CC-CCCC
Q 014195 139 HVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTETK----KWQD-LP-PLPV 210 (429)
Q Consensus 139 ~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~----~W~~-~~-~~p~ 210 (429)
.+..+++....+..+.... +...++++. +++||+.-.. ...++++++... .... +. .+..
T Consensus 405 ~Ir~i~l~~~~~~~l~~~~----~~~~gl~~d~~~~~lY~sD~~--------~~~I~~~~l~g~~~~~~~~~vi~~~l~~ 472 (791)
T 3m0c_C 405 EVRKMTLDRSEYTSLIPNL----RNVVALDTEVASNRIYWSDLS--------QRMICSTQLDRAHGVSSYDTVISRDIQA 472 (791)
T ss_dssp SEEEECTTSCCCEEEECSC----SSEEEEEEETTTTEEEEEETT--------TTEEEEEEC--------CEEEECSSCSC
T ss_pred ceeEeeccCCcceeeecCC----CceEEEeecccCCeeEEeecc--------ceeEEEEeccCCCCCcceeEEEecCCCC
Confidence 3667777777666553221 223445544 6899988321 356778887652 2222 22 2222
Q ss_pred CCCCceEEE--ECCEEEEEeCCCCCCCCccccceEeeeecCCccccceeecc--CCCCCCCceeEEE--eCCEEEEEccc
Q 014195 211 PRYAPATQL--WRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEI--PIPRGGPHRACVV--VDDRLLVIGGQ 284 (429)
Q Consensus 211 ~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~--~~p~~~~~~~~~~--~~~~iyv~GG~ 284 (429)
| .++++ .+++||+.-... ..+.+.+ .....-+.+. .+..++ ++++ .++.||+.--.
T Consensus 473 P---~GLAvD~~~~~LY~tD~~~-----~~I~v~~-------ldG~~~~~l~~~~l~~P~---gIaVDp~~g~LYwtD~g 534 (791)
T 3m0c_C 473 P---DGLAVDWIHSNIYWTDSVL-----GTVSVAD-------TKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWG 534 (791)
T ss_dssp C---CEEEEETTTTEEEEEETTT-----TEEEEEE-------TTSSSEEEEEECTTCCEE---EEEEETTTTEEEEEECS
T ss_pred c---ceeeeeecCCcEEEEecCC-----CeEEEEe-------CCCCeEEEEEeCCCCCcc---eEEEecCCCCEEEecCC
Confidence 2 23333 367999985322 1222222 2222222221 222222 3444 36889987521
Q ss_pred CCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcC--CCCCCCCCcceeEEE--ECCEEEEEcccCCCCCCccce
Q 014195 285 EGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLP--SMPKPDSHIEFAWVL--VNNSIVIVGGTTEKHPTTKKM 359 (429)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~--~~~~~r~~~~~~~~~--~~~~i~v~GG~~~~~~~~~~~ 359 (429)
. ...|++++ +...-+.+. .+..|. ++++ .+++||+.-..
T Consensus 535 ~---------------------~~~I~~~~~dG~~~~~lv~~~l~~P~-----GLavD~~~~~LYwaD~~---------- 578 (791)
T 3m0c_C 535 T---------------------PAKIKKGGLNGVDIYSLVTENIQWPN-----GITLDLLSGRLYWVDSK---------- 578 (791)
T ss_dssp S---------------------SCEEEEEETTSCCEEEEECSSCSCEE-----EEEEETTTTEEEEEETT----------
T ss_pred C---------------------CCeEEEEecCCCceEEEEeCCCCCce-----EEEEecCCCeEEEEeCC----------
Confidence 1 01366666 433333332 222222 2343 36899998532
Q ss_pred eeeCcEEEEecCCCCeEEec----ccCcceeeeeeEEECCEEEEEcc
Q 014195 360 VLVGEIFQFNLNTLKWHVIG----KLPYRVKTTLAGYWNGWLYFTSG 402 (429)
Q Consensus 360 ~~~~~i~~yd~~~~~W~~v~----~lp~~r~~~~~~~~~~~i~v~GG 402 (429)
.+.|+.+|++...=+.+. .++.| +++++.+++||+.--
T Consensus 579 --~~~I~~~d~dG~~~~~v~~~~~~l~~P---~glav~~~~lYwtD~ 620 (791)
T 3m0c_C 579 --LHSISSIDVNGGNRKTILEDEKRLAHP---FSLAVFEDKVFWTDI 620 (791)
T ss_dssp --TTEEEEEETTSCSCEEEEECTTTTSSE---EEEEEETTEEEEEET
T ss_pred --CCcEEEEecCCCceEEEecCCCccCCC---CEEEEeCCEEEEEEC
Confidence 237999998765444442 23333 566678889998753
No 266
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=53.01 E-value=1.9e+02 Score=29.09 Aligned_cols=92 Identities=17% Similarity=0.078 Sum_probs=47.0
Q ss_pred CcEEEE--CCEEEEEeccCCCCceeeeEEEEECCC----CceeeCC--CCCCCCccceeeEEE--eCCEEEEEeCeeCCC
Q 014195 115 GAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTD----NTWGGRF--DMPREMAHSHLGMVT--DGRYIYVVTGQYGPQ 184 (429)
Q Consensus 115 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~----~~W~~~~--~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~ 184 (429)
++++.. ++.||+.--. ...+.++++.+ ..-..+. .+.. -.++++ .++.||+.-.
T Consensus 409 ~gla~d~~~~~Ly~sD~~------~~~I~~~~~~g~~~~~~~~~~i~~~~~~-----P~glavD~~~g~LY~tD~----- 472 (699)
T 1n7d_A 409 VALDTEVASNRIYWSDLS------QRMICSTQLDRAHGVSSYDTVISRDIQA-----PDGLAVDWIHSNIYWTDS----- 472 (699)
T ss_dssp CCCEEETTTTEEEECCTT------TTSBEEEESCCCCC-CCCCCBCCSCC-------CCCEECCCSSSBCEECCT-----
T ss_pred EEEccccccCeEEEEecC------CCeEEEEecCCCCCCcceEEEEeCCCCC-----cceEEEEeeCCcEEEEec-----
Confidence 344443 5788886322 12478888875 1111111 1222 123444 4778998621
Q ss_pred CCCCCceeEEEeCCCCceEeCC--CCCCCCCCceEEE--ECCEEEEEe
Q 014195 185 CRGPTAHTFVLDTETKKWQDLP--PLPVPRYAPATQL--WRGRLHVMG 228 (429)
Q Consensus 185 ~~~~~~~~~~yd~~t~~W~~~~--~~p~~r~~~~~~~--~~~~lyv~G 228 (429)
....++++++....-..+. .+..|+ .+++ .++.||+.-
T Consensus 473 ---~~~~I~v~d~dg~~~~~l~~~~~~~P~---giavDp~~g~ly~td 514 (699)
T 1n7d_A 473 ---VLGTVSVADTKGVKRKTLFREQGSKPR---AIVVDPVHGFMYWTD 514 (699)
T ss_dssp ---TTSCEEEEBSSSCCEEEECCCSSCCCC---CEECCSSSSCCEECC
T ss_pred ---cCCeEEEEecCCCceEEEEeCCCCCcc---eEEEccCCCcEEEcc
Confidence 1456888998876544432 233332 2333 357788764
No 267
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=51.66 E-value=1e+02 Score=25.60 Aligned_cols=138 Identities=12% Similarity=0.137 Sum_probs=65.9
Q ss_pred EEEECCEEEEEeccCCCCceeeeEEEEECCCCceee--C----CCCCCCCccceeeEEEe-CCEEEEEeCeeCCCCCCCC
Q 014195 117 AIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGG--R----FDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPT 189 (429)
Q Consensus 117 ~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~--~----~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~ 189 (429)
++.+.+.+|+|=|. .+|+++.....+.. + +.+|. ...++.... ++++|+|-|
T Consensus 29 i~~~~g~~y~Fkg~--------~~wr~~~~~~~~~p~~I~~~wp~Lp~---~iDAa~~~~~~~~iyfFkG---------- 87 (207)
T 1pex_A 29 ITSLRGETMIFKDR--------FFWRLHPQQVDAELFLTKSFWPELPN---RIDAAYEHPSHDLIFIFRG---------- 87 (207)
T ss_dssp EEEETTEEEEEETT--------EEEEECSSSSCCEEEEHHHHCTTSCS---SCCEEEEETTTTEEEEEET----------
T ss_pred EEeCCCcEEEEECC--------EEEEEeCCCcCCCceehhHhccCCCC---CccEEEEeccCCcEEEEcc----------
Confidence 44568899999652 47777765443321 1 23332 222333232 689999965
Q ss_pred ceeEEEeCCCCc---eEeCCC--CCCC-CCCceEEEE--CCEEEEEeCCCCCCCCccccceEeeeecCCcc--ccceeec
Q 014195 190 AHTFVLDTETKK---WQDLPP--LPVP-RYAPATQLW--RGRLHVMGGSGENRYTPEVDHWSLAVKDGKPL--EKEWRTE 259 (429)
Q Consensus 190 ~~~~~yd~~t~~---W~~~~~--~p~~-r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~--~~~W~~~ 259 (429)
+.+|+|+..+-. =..+.. +|.. ..--++... ++++|+|-|..--.++..... +...-|. ...|.-+
T Consensus 88 ~~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG~~ywr~d~~~~~----~d~gyPr~i~~~~~Gi 163 (207)
T 1pex_A 88 RKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSGNQVWRYDDTNHI----MDKDYPRLIEEDFPGI 163 (207)
T ss_dssp TEEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEETTEEEEEETTTTE----ECSSCCCBHHHHSTTS
T ss_pred CEEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeCCEEEEEeCcCcc----ccCCCCccHHHcCCCC
Confidence 356777643221 122332 2321 112223322 489999977432111111100 0000021 1234333
Q ss_pred cCCCCCCCceeEEEeCCEEEEEccc
Q 014195 260 IPIPRGGPHRACVVVDDRLLVIGGQ 284 (429)
Q Consensus 260 ~~~p~~~~~~~~~~~~~~iyv~GG~ 284 (429)
|... . ++...++++|+|-|.
T Consensus 164 ---p~~i-D-aAf~~~g~~YfFkg~ 183 (207)
T 1pex_A 164 ---GDKV-D-AVYEKNGYIYFFNGP 183 (207)
T ss_dssp ---CSCC-S-EEEEETTEEEEEETT
T ss_pred ---CCCc-c-EEEEcCCcEEEEECC
Confidence 3222 2 555579999999886
No 268
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=51.10 E-value=1.7e+02 Score=27.85 Aligned_cols=72 Identities=14% Similarity=0.062 Sum_probs=38.4
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCC----ceeeCC---CC--CCCCccceeeEEEeCCEEEEEeCeeCCCCCCCCce
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDN----TWGGRF---DM--PREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAH 191 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~----~W~~~~---~~--~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 191 (429)
..++|+-|..+ +.++++|..++ +-.+.- .+ +....+-|+..+.-++ |||..--+..+ .....
T Consensus 95 r~~l~v~~l~s------~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g--~~~g~ 165 (462)
T 2ece_A 95 RRFLIVPGLRS------SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEG--EGPGG 165 (462)
T ss_dssp SCEEEEEBTTT------CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTS--CSCCE
T ss_pred CCEEEEccCCC------CeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCC--CCCCe
Confidence 34677766543 45999998877 222211 01 0111243444455566 88742222121 12578
Q ss_pred eEEEeCCCCc
Q 014195 192 TFVLDTETKK 201 (429)
Q Consensus 192 ~~~yd~~t~~ 201 (429)
+..+|.+|.+
T Consensus 166 v~vlD~~T~~ 175 (462)
T 2ece_A 166 ILMLDHYSFE 175 (462)
T ss_dssp EEEECTTTCC
T ss_pred EEEEECCCCe
Confidence 9999999865
No 269
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=49.26 E-value=1.5e+02 Score=26.68 Aligned_cols=61 Identities=11% Similarity=0.191 Sum_probs=32.5
Q ss_pred EEECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEEec--ccCccee--eeeeEEECCEEEEEcccCC
Q 014195 337 VLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIG--KLPYRVK--TTLAGYWNGWLYFTSGQRD 405 (429)
Q Consensus 337 ~~~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v~--~lp~~r~--~~~~~~~~~~i~v~GG~~~ 405 (429)
...+++.++.++.+.... ..++.+|.......... .+..... ...+...++++++.|+.+.
T Consensus 227 fspdg~~l~~~s~d~~~~--------~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~ 291 (365)
T 4h5i_A 227 FIADDTVLIAASLKKGKG--------IVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN 291 (365)
T ss_dssp EEETTEEEEEEEESSSCC--------EEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS
T ss_pred EcCCCCEEEEEecCCcce--------eEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC
Confidence 456888888887765431 24666776665544321 1111111 1112234678888877654
No 270
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=47.98 E-value=1.7e+02 Score=26.84 Aligned_cols=115 Identities=12% Similarity=0.045 Sum_probs=59.8
Q ss_pred cccccccCCCeEEccCCCCCccCCcEEEE--CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCC--CCCCCccceeeE
Q 014195 92 FQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFD--MPREMAHSHLGM 167 (429)
Q Consensus 92 ~~~~d~~~~~W~~~~~~p~~R~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~--~~~~~~r~~~~~ 167 (429)
+..+++.....+.+.+- ...-.+++.. ++.||+.--. ...++++++.....+.+.. +.. + .+.++
T Consensus 98 I~~i~~~~~~~~~~~~~--~~~~~gl~~d~~~~~ly~~D~~------~~~I~r~~~~g~~~~~~~~~~~~~--p-~glav 166 (386)
T 3v65_B 98 IRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSDVT------LDRILRANLNGSNVEEVVSTGLES--P-GGLAV 166 (386)
T ss_dssp EEEECTTSCCCEEEECS--CSCEEEEEEETTTTEEEEEETT------TTEEEEEETTSCCEEEEECSSCSC--C-CCEEE
T ss_pred ceeeccCCCcEEEEecC--CCccEEEEEecCCCeEEEEeCC------CCcEEEEecCCCCcEEEEeCCCCC--c-cEEEE
Confidence 44555555444443221 1112233333 5789987422 2358899998877655422 222 2 12333
Q ss_pred EEeCCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCC--CCCCCCCCceEEEE--CCEEEEEe
Q 014195 168 VTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP--PLPVPRYAPATQLW--RGRLHVMG 228 (429)
Q Consensus 168 ~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~r~~~~~~~~--~~~lyv~G 228 (429)
...++.||+.-.. ...+++++++...-+.+. .+..|+ .+++- ++.||+.-
T Consensus 167 d~~~g~lY~~d~~--------~~~I~~~~~dg~~~~~l~~~~l~~P~---giavdp~~g~ly~td 220 (386)
T 3v65_B 167 DWVHDKLYWTDSG--------TSRIEVANLDGAHRKVLLWQSLEKPR---AIALHPMEGTIYWTD 220 (386)
T ss_dssp ETTTTEEEEEETT--------TTEEEECBTTSCSCEEEECSSCSCEE---EEEEETTTTEEEEEE
T ss_pred EeCCCeEEEEcCC--------CCeEEEEeCCCCceEEeecCCCCCCc---EEEEEcCCCeEEEec
Confidence 3347899987321 457888888765433321 233332 23333 67888874
No 271
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=45.88 E-value=1.6e+02 Score=26.19 Aligned_cols=23 Identities=4% Similarity=0.185 Sum_probs=15.4
Q ss_pred cceeeeecCCCcccceeeeeeecCCCCe
Q 014195 33 ADFFWASSSKFTSSYLNIASNWSPYHNS 60 (429)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~yd~~~~~ 60 (429)
.+.+.+.|+.++ .+..||..+.+
T Consensus 70 ~~~~~~~~~~d~-----~v~iWd~~~~~ 92 (355)
T 3vu4_A 70 TNYVAFVTGVKE-----VVHIWDDVKKQ 92 (355)
T ss_dssp SSEEEEECSSTT-----EEEEEETTTTE
T ss_pred CCEEEEEECCcc-----EEEEEECCCCc
Confidence 345556666544 67888888777
No 272
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=45.72 E-value=1.2e+02 Score=29.91 Aligned_cols=121 Identities=16% Similarity=0.225 Sum_probs=60.0
Q ss_pred eEEEECCEEEEEeCCCCCCCCccccceEeeeecCCccccceeeccCCCCCC------CceeEEEeCCEEEEEcccCCCCC
Q 014195 216 ATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGG------PHRACVVVDDRLLVIGGQEGDFM 289 (429)
Q Consensus 216 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~------~~~~~~~~~~~iyv~GG~~~~~~ 289 (429)
+-++.+++||+..... .+..++. ..-...|+.....+... ...+.++.+++||+....
T Consensus 63 ~P~v~~g~vyv~~~~~------~v~AlD~-----~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~d----- 126 (582)
T 1flg_A 63 QAIVSDGVIYVTASYS------RLFALDA-----KTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLD----- 126 (582)
T ss_dssp CCEEETTEEEEEETTT------EEEEEES-----SSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETT-----
T ss_pred ccEEECCEEEEEcCCC------CEEEEEC-----CCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCC-----
Confidence 4467899999987632 1222221 12345587644332210 012445678998885321
Q ss_pred CCCCCCccccccCCeeeeCceEEeC-CC--CCeEEcCCCCCCCCCcceeEEEECC------EEEEEcccCCCCCCcccee
Q 014195 290 AKPGSPIFKCSRRNEVVYDDVYMLD-DE--MKWKVLPSMPKPDSHIEFAWVLVNN------SIVIVGGTTEKHPTTKKMV 360 (429)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~v~~~d-~~--~~W~~~~~~~~~r~~~~~~~~~~~~------~i~v~GG~~~~~~~~~~~~ 360 (429)
..++.+| .+ ..|+.-...+........+-++.++ .||+ |....+..
T Consensus 127 ------------------g~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~v-g~~~~e~~------ 181 (582)
T 1flg_A 127 ------------------ASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIH-GSSGDEFG------ 181 (582)
T ss_dssp ------------------TEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEE-CCBCGGGC------
T ss_pred ------------------CEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEE-eccccccC------
Confidence 1378887 44 3588643211111111122245556 5554 43221100
Q ss_pred eeCcEEEEecCCC--CeEE
Q 014195 361 LVGEIFQFNLNTL--KWHV 377 (429)
Q Consensus 361 ~~~~i~~yd~~~~--~W~~ 377 (429)
....++.||+++. .|+.
T Consensus 182 ~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 182 VVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp CBCEEEEECTTTCCEEEEE
T ss_pred CCCEEEEEECCCCCEEeec
Confidence 1247999999875 4864
No 273
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=45.23 E-value=2.5e+02 Score=28.06 Aligned_cols=59 Identities=5% Similarity=0.090 Sum_probs=34.9
Q ss_pred CceEEeC-CCC--CeEEcCCCCCCCCCcceeEEEECCEEEEEcccCCCCCCccceeeeCcEEEEecCCC---CeEEe
Q 014195 308 DDVYMLD-DEM--KWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTL---KWHVI 378 (429)
Q Consensus 308 ~~v~~~d-~~~--~W~~~~~~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~---~W~~v 378 (429)
+++|.+| .+. .|..+...... ....+...++++|+....+... ..|+.+|+++. .|+.+
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~---~~~~~~~~g~~l~~~t~~~~~~---------~~l~~~d~~~~~~~~~~~l 323 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDA---DVSLVDNKGSTLYLLTNRDAPN---------RRLVTVDAANPGPAHWRDL 323 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSS---CEEEEEEETTEEEEEECTTCTT---------CEEEEEETTSCCGGGCEEE
T ss_pred cEEEEEECCCCCCceEEEeCCCCc---eEEEEeccCCEEEEEECCCCCC---------CEEEEEeCCCCCccccEEE
Confidence 3578877 443 67777542211 1111245578899887654322 37899998763 48775
No 274
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=44.72 E-value=1.4e+02 Score=25.18 Aligned_cols=91 Identities=14% Similarity=0.034 Sum_probs=49.5
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe--CCEEEEEeCeeCCCCCCCCceeEEEeCC
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~ 198 (429)
++.||+.-.. ...+.+||+....-..+.+... ..-+++++. ++.||+.-.. ...+.++|++
T Consensus 47 ~~~ly~~d~~------~~~I~~~~~~g~~~~~~~~~~~---~~p~~ia~d~~~~~lyv~d~~--------~~~I~~~~~~ 109 (267)
T 1npe_A 47 DKVVYWTDIS------EPSIGRASLHGGEPTTIIRQDL---GSPEGIALDHLGRTIFWTDSQ--------LDRIEVAKMD 109 (267)
T ss_dssp TTEEEEEETT------TTEEEEEESSSCCCEEEECTTC---CCEEEEEEETTTTEEEEEETT--------TTEEEEEETT
T ss_pred CCEEEEEECC------CCEEEEEecCCCCcEEEEECCC---CCccEEEEEecCCeEEEEECC--------CCEEEEEEcC
Confidence 5689987532 2358899988765433321111 122445554 6799987421 4578889887
Q ss_pred CCceEeCCCCCCCCCCceEEEE--CCEEEEEeC
Q 014195 199 TKKWQDLPPLPVPRYAPATQLW--RGRLHVMGG 229 (429)
Q Consensus 199 t~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG 229 (429)
...-+.+.+.... .-..++.. +++||+...
T Consensus 110 g~~~~~~~~~~~~-~P~~i~vd~~~g~lyv~~~ 141 (267)
T 1npe_A 110 GTQRRVLFDTGLV-NPRGIVTDPVRGNLYWTDW 141 (267)
T ss_dssp SCSCEEEECSSCS-SEEEEEEETTTTEEEEEEC
T ss_pred CCCEEEEEECCCC-CccEEEEeeCCCEEEEEEC
Confidence 6543332211111 11233333 689999853
No 275
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=41.98 E-value=1.9e+02 Score=25.82 Aligned_cols=66 Identities=8% Similarity=-0.105 Sum_probs=31.2
Q ss_pred EEeccCCCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEEe--CCEEEEEeCeeCCCCCCCCceeEEEeCC-CCce
Q 014195 126 VFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTE-TKKW 202 (429)
Q Consensus 126 v~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~-t~~W 202 (429)
.+|.+...+. -.++.+|+.+.+.+.+...+.+.......+++. +..||+..- . .+..||.. +.+.
T Consensus 6 ~vg~~~~~~~--i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~---------~-~v~~~~~~~~g~~ 73 (365)
T 1jof_A 6 MIGTWTPPGA--IFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM---------K-KWSSFAVKSPTEI 73 (365)
T ss_dssp EEEESSSSCE--EEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB---------T-EEEEEEEEETTEE
T ss_pred EEEEccCCCc--EEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEcc---------c-eEEEEEECCCCCE
Confidence 3466543221 124567788888776543211001111223332 445765532 1 57777765 5554
Q ss_pred E
Q 014195 203 Q 203 (429)
Q Consensus 203 ~ 203 (429)
.
T Consensus 74 ~ 74 (365)
T 1jof_A 74 V 74 (365)
T ss_dssp E
T ss_pred E
Confidence 3
No 276
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=41.13 E-value=1.9e+02 Score=25.68 Aligned_cols=24 Identities=13% Similarity=0.050 Sum_probs=16.9
Q ss_pred ECCEEEEEcccCCCCCCccceeeeCc-EEEEecCCCC
Q 014195 339 VNNSIVIVGGTTEKHPTTKKMVLVGE-IFQFNLNTLK 374 (429)
Q Consensus 339 ~~~~i~v~GG~~~~~~~~~~~~~~~~-i~~yd~~~~~ 374 (429)
.++++++.|+.++ . +.++|..+.+
T Consensus 205 ~~g~~l~s~s~d~------------~~v~iwd~~~~~ 229 (355)
T 3vu4_A 205 RKSDMVATCSQDG------------TIIRVFKTEDGV 229 (355)
T ss_dssp TTSSEEEEEETTC------------SEEEEEETTTCC
T ss_pred CCCCEEEEEeCCC------------CEEEEEECCCCc
Confidence 4677888887653 5 7788887654
No 277
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=39.40 E-value=1.3e+02 Score=26.05 Aligned_cols=102 Identities=9% Similarity=-0.037 Sum_probs=50.7
Q ss_pred ccccccccCCCeEEccCCC-CCcc--CCcEEEE-CCEEEEE----eccCC-------CCceeeeEEEEECCCCceeeCCC
Q 014195 91 TFQDLPAPELKWEKMKAAP-VPRL--DGAAIQI-KNLLYVF----AGYGS-------IDYVHSHVDIYNFTDNTWGGRFD 155 (429)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p-~~R~--~~~~~~~-~~~iyv~----GG~~~-------~~~~~~~~~~yd~~~~~W~~~~~ 155 (429)
.+..+++. .+.+.+.... ..+. -..++.- ++.||+. |-... .......+++||+.+++.+.+.
T Consensus 108 ~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~- 185 (305)
T 3dr2_A 108 AITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA- 185 (305)
T ss_dssp EEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-
T ss_pred EEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-
Confidence 46666765 5555554321 1111 1223332 6788885 32211 0111346999999988887764
Q ss_pred CCCCCccceeeEEEe--CCEEEEEeCeeCCCCCCCCceeEEEeCCCCc
Q 014195 156 MPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTETKK 201 (429)
Q Consensus 156 ~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~ 201 (429)
.. . ...+++.. +..||+........ ....+++||...+.
T Consensus 186 -~~--~-~p~gl~~spdg~~lyv~~~~~~~~---~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 186 -DL--D-HPNGLAFSPDEQTLYVSQTPEQGH---GSVEITAFAWRDGA 226 (305)
T ss_dssp -EE--S-SEEEEEECTTSSEEEEEECCC------CCCEEEEEEEETTE
T ss_pred -cC--C-CCcceEEcCCCCEEEEEecCCcCC---CCCEEEEEEecCCC
Confidence 21 1 12234443 34688774321100 02578888876543
No 278
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=38.96 E-value=61 Score=30.10 Aligned_cols=72 Identities=8% Similarity=0.127 Sum_probs=42.7
Q ss_pred CCEEEEEeccC---CCCceeeeEEEEECCCCceeeCCCCCCCCccceeeEEE-eCC--EEEEEeCeeCCCCCCCCceeEE
Q 014195 121 KNLLYVFAGYG---SIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGR--YIYVVTGQYGPQCRGPTAHTFV 194 (429)
Q Consensus 121 ~~~iyv~GG~~---~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~--~lyv~GG~~~~~~~~~~~~~~~ 194 (429)
++++||.-+.. ......+.++++|.++.+-.. .++. ...-.++++ -++ .||+.-+. .+++.+
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~--~i~v--g~~~~~lavs~D~~~~ly~tn~~--------~~~VsV 358 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLA--KFEM--GHEIDSINVSQDEKPLLYALSTG--------DKTLYI 358 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEE--EEEE--EEEECEEEECSSSSCEEEEEETT--------TTEEEE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEE--EEEC--CCCcceEEECCCCCeEEEEEcCC--------CCeEEE
Confidence 56899974322 222235679999998887543 2222 112223333 233 57776431 578999
Q ss_pred EeCCCCceEe
Q 014195 195 LDTETKKWQD 204 (429)
Q Consensus 195 yd~~t~~W~~ 204 (429)
||..+.+-..
T Consensus 359 iD~~t~k~~~ 368 (386)
T 3sjl_D 359 HDAESGEELR 368 (386)
T ss_dssp EETTTCCEEE
T ss_pred EECCCCcEEE
Confidence 9999887543
No 279
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=38.84 E-value=3.1e+02 Score=27.46 Aligned_cols=80 Identities=10% Similarity=-0.054 Sum_probs=41.1
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECC---CCceeeCCCCC---CCCccceeeEEE-eCCEEEEEeCeeCCCCCCCCceeE
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFT---DNTWGGRFDMP---REMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTF 193 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~---~~~W~~~~~~~---~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~ 193 (429)
++++|.+--..+.+ ...+|+.+.. ...|+.+-+.. ......-.+... -+++.++++...+... ...++
T Consensus 118 G~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e---~~~i~ 192 (741)
T 1yr2_A 118 GASVFYSWNSGLMN--QSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSD---WRTVK 192 (741)
T ss_dssp TTEEEEEEECSSCS--SCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCS---EEEEE
T ss_pred CCEEEEEEEcCCCe--EEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCc---eEEEE
Confidence 56666554322222 2457888877 67787753322 100001112222 2555555554332221 35799
Q ss_pred EEeCCCCceEeC
Q 014195 194 VLDTETKKWQDL 205 (429)
Q Consensus 194 ~yd~~t~~W~~~ 205 (429)
++|+++.+....
T Consensus 193 v~dl~tg~~~~~ 204 (741)
T 1yr2_A 193 FVGVADGKPLAD 204 (741)
T ss_dssp EEETTTCCEEEE
T ss_pred EEECCCCCCCCc
Confidence 999999987553
No 280
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=37.83 E-value=2.4e+02 Score=25.90 Aligned_cols=34 Identities=6% Similarity=0.175 Sum_probs=23.1
Q ss_pred eeEEE-eCCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCC
Q 014195 165 LGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP 206 (429)
Q Consensus 165 ~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~ 206 (429)
+.+++ -+++||+.... ...+.++|+++++-..+.
T Consensus 134 ~~la~d~~g~lyv~d~~--------~~~I~~id~~~g~~~~~~ 168 (409)
T 3hrp_A 134 WGIAAVGNNTVLAYQRD--------DPRVRLISVDDNKVTTVH 168 (409)
T ss_dssp EEEEECSTTEEEEEETT--------TTEEEEEETTTTEEEEEE
T ss_pred eEEEEeCCCCEEEEecC--------CCcEEEEECCCCEEEEee
Confidence 34444 36789998541 357899999987765553
No 281
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=37.29 E-value=61 Score=32.35 Aligned_cols=51 Identities=20% Similarity=0.257 Sum_probs=29.0
Q ss_pred ECCEEEEEcccCCCCCCccceeeeCcEEEEecCCCCeE-----Eecc--cCcceeeeeeEEEC--CEEEEEccc
Q 014195 339 VNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWH-----VIGK--LPYRVKTTLAGYWN--GWLYFTSGQ 403 (429)
Q Consensus 339 ~~~~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~-----~v~~--lp~~r~~~~~~~~~--~~i~v~GG~ 403 (429)
.++++|+|=|. ..|+||..+++-. .+.. +..+..-.++...+ +++|+|-|.
T Consensus 547 ~~gktYFFkG~--------------~ywryd~~~~~vd~gYPk~i~~~w~G~p~~iDAAf~~~~~g~~YFFkG~ 606 (631)
T 1ck7_A 547 KNKKTYIFAGD--------------KFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGA 606 (631)
T ss_dssp TTCEEEEEETT--------------EEEEEETTTTEECTTCCEETTTSCSSCCTTCCEEECCTTSCBCEEEETT
T ss_pred CCCeEEEEECC--------------EEEEEcCCcccccCCCCcchHhhcCCCCCCCcEeEEEcCCCeEEEEECC
Confidence 46899999774 6899997665211 1110 01112223444444 799999773
No 282
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=34.72 E-value=2.4e+02 Score=24.80 Aligned_cols=113 Identities=16% Similarity=0.083 Sum_probs=56.5
Q ss_pred cccccccCCCeEEccCCCCCccCCcEEEE--CCEEEEEeccCCCCceeeeEEEEECCC----CceeeC-C-CCCCCCccc
Q 014195 92 FQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTD----NTWGGR-F-DMPREMAHS 163 (429)
Q Consensus 92 ~~~~d~~~~~W~~~~~~p~~R~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~----~~W~~~-~-~~~~~~~r~ 163 (429)
+..+|........+. +.-..-++++.. ++.||+.--. ...+.++|+.+ ..-+.+ . .+.. +
T Consensus 12 I~~i~~~~~~~~~~~--~~~~~p~g~~~d~~~~~ly~~D~~------~~~I~~~~~~g~~~~~~~~~~~~~~~~~--p-- 79 (316)
T 1ijq_A 12 VRKMTLDRSEYTSLI--PNLRNVVALDTEVASNRIYWSDLS------QRMICSTQLDRAHGVSSYDTVISRDIQA--P-- 79 (316)
T ss_dssp EEEEETTSCCCEEEE--CSCSSEEEEEEETTTTEEEEEETT------TTEEEEEEC--------CEEEECSSCSC--C--
T ss_pred EEEEECCCcceEehh--cCCCceEEEEEEeCCCEEEEEECC------CCcEEEEECCCCCCCcccEEEEeCCCCC--c--
Confidence 344455555444332 111222344443 5689998543 23588899876 222222 1 2222 2
Q ss_pred eeeEEE--eCCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCC--CCCCCCCCceEEE--ECCEEEEEe
Q 014195 164 HLGMVT--DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP--PLPVPRYAPATQL--WRGRLHVMG 228 (429)
Q Consensus 164 ~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~r~~~~~~~--~~~~lyv~G 228 (429)
.++++ .++.||+.-.. ...++++|+....-..+. .+..|+ .+++ .++.||+..
T Consensus 80 -~glavd~~~~~ly~~d~~--------~~~I~~~~~~g~~~~~~~~~~~~~P~---~iavdp~~g~ly~~d 138 (316)
T 1ijq_A 80 -DGLAVDWIHSNIYWTDSV--------LGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTD 138 (316)
T ss_dssp -CEEEEETTTTEEEEEETT--------TTEEEEEETTSSSEEEEEECTTCCEE---EEEEETTTTEEEEEE
T ss_pred -CEEEEeecCCeEEEEECC--------CCEEEEEeCCCCceEEEEECCCCCcc---eEEeCCCCCEEEEEc
Confidence 34444 47899997321 457888998765433321 233332 3333 368899885
No 283
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=33.93 E-value=3.8e+02 Score=27.01 Aligned_cols=207 Identities=17% Similarity=0.273 Sum_probs=102.1
Q ss_pred CCceeeCCCCCCCCccceeeEEEe---CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCC----CCceEEE
Q 014195 147 DNTWGGRFDMPREMAHSHLGMVTD---GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPR----YAPATQL 219 (429)
Q Consensus 147 ~~~W~~~~~~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r----~~~~~~~ 219 (429)
..+|+.+.+-... .| -.++++. .+.||+... ...+++.+-...+|+.+.+.+... .....+.
T Consensus 10 ~~~w~~~~~~~~~-g~-i~~i~~~p~~~~~~~~~~~---------~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~ 78 (737)
T 2cn3_A 10 PYKWDNVVIGGGG-GF-MPGIVFNETEKDLIYARAA---------IGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIA 78 (737)
T ss_dssp CEEEEEECCCSBC-SC-CCEEEECSSSTTCEEEECS---------SSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEE
T ss_pred CCeeEEcccCCCc-ce-eeEEEECCCCCCEEEEEec---------CCcEEEeCCCCCCEEECcCccCcccccCCCcceEE
Confidence 4679888654321 12 2344443 256776431 236888888899999987643211 1122333
Q ss_pred E----CCEEEEEeCCCCCCCCc-cccceEeeeecCCccccceeeccC-CC------CCCCceeEEEe--C-CEEEEEccc
Q 014195 220 W----RGRLHVMGGSGENRYTP-EVDHWSLAVKDGKPLEKEWRTEIP-IP------RGGPHRACVVV--D-DRLLVIGGQ 284 (429)
Q Consensus 220 ~----~~~lyv~GG~~~~~~~~-~~~~~~~~~~~~d~~~~~W~~~~~-~p------~~~~~~~~~~~--~-~~iyv~GG~ 284 (429)
+ .+.||+..|.......+ ....|.- ...-.+|+.... .+ .....+.+++. + +.||+.. .
T Consensus 79 ~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S-----~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~-~ 152 (737)
T 2cn3_A 79 TDPVDPNRVYIVAGMYTNDWLPNMGAILRS-----TDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT-R 152 (737)
T ss_dssp ECSSSTTCEEEEECSCSSSSSCCCCEEEEE-----SSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC-S
T ss_pred eCCCCCCEEEEEecccccccccCCccEEEe-----CCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee-c
Confidence 3 35788886632111111 1233332 245678887532 11 11111233332 2 4566632 1
Q ss_pred CCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcCCCCCCCC------------CcceeEEEEC----------C
Q 014195 285 EGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDS------------HIEFAWVLVN----------N 341 (429)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~~~~~~r~------------~~~~~~~~~~----------~ 341 (429)
.+. -+|+-. ...+|+.+..+|.... ..+...+.++ +
T Consensus 153 ~g~---------------------gl~~S~DgG~tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~ 211 (737)
T 2cn3_A 153 CGN---------------------GLWRSTDYGVTWSKVESFPNPGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTK 211 (737)
T ss_dssp TTC---------------------CEEEESSTTSSCEECTTCCCCCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCS
T ss_pred cCC---------------------cEEEeCCCCcceecccCCCCCcccccCcccccccCCCCEEEEEcCCCCcccCCCCC
Confidence 101 266665 6789999986654311 0112223332 2
Q ss_pred EEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEEecccCcceeeeeeEEE-CCEEEEEcc
Q 014195 342 SIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIGKLPYRVKTTLAGYW-NGWLYFTSG 402 (429)
Q Consensus 342 ~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v~~lp~~r~~~~~~~~-~~~i~v~GG 402 (429)
.||+.-... . ..+++=.-...+|+.+..+|.....+.++.. ++.+|+..+
T Consensus 212 ~v~~~~~~~-~----------~~v~~S~DgG~tW~~~~~~p~~~~~~~~~~~~~~~l~~~~~ 262 (737)
T 2cn3_A 212 TIYVGVADK-N----------ESIYRSTDGGVTWKAVPGQPKGLLPHHGVLASNGMLYITYG 262 (737)
T ss_dssp CEEEEESCS-S----------CCEEEESSTTSCCEECTTCCCSSEEEEEEECTTSEEEEEEE
T ss_pred EEEEEecCC-C----------ccEEEEcCCCCceEECCCCCCcccceEEEECCCCeEEEEec
Confidence 566542111 1 0243332235689999877765444433322 678888643
No 284
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=32.49 E-value=1.2e+02 Score=26.72 Aligned_cols=104 Identities=15% Similarity=0.126 Sum_probs=50.3
Q ss_pred cccccccccCCCe-EEccCCCCCccCCcEEEECCEEEEEeccCCCCc--e-eeeEEEEECCCCceeeCCCCCCCCcccee
Q 014195 90 ATFQDLPAPELKW-EKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDY--V-HSHVDIYNFTDNTWGGRFDMPREMAHSHL 165 (429)
Q Consensus 90 ~~~~~~d~~~~~W-~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~--~-~~~~~~yd~~~~~W~~~~~~~~~~~r~~~ 165 (429)
..++.+|..+++. +.+.. + .....+...+.+++.+..+.... . ...++.+| +.+++.+..- . ...
T Consensus 152 ~~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~-~----~~~ 220 (347)
T 2gop_A 152 TTFWIFDTESEEVIEEFEK-P---RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK-V----SFY 220 (347)
T ss_dssp EEEEEEETTTTEEEEEEEE-E---TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE-E----SEE
T ss_pred ceEEEEECCCCeEEeeecC-C---CcccccCCCCeEEEEEecccccccccccccEEEeC--CCceEEeccC-c----cee
Confidence 3466667766655 44443 2 22333333444555554332211 1 34688888 6677665432 1 112
Q ss_pred eEEEeCCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCC
Q 014195 166 GMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPP 207 (429)
Q Consensus 166 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~ 207 (429)
.....+..|++.+. ...........++.+| +.++..+..
T Consensus 221 ~~spdg~~l~~~~~-~~~~~~~~~~~l~~~d--~~~~~~l~~ 259 (347)
T 2gop_A 221 AVDSDGERILLYGK-PEKKYMSEHNKLYIYD--GKEVMGILD 259 (347)
T ss_dssp EEEECSSCEEEEEC-CSSSCCCSSCEEEEEC--SSCEEESST
T ss_pred eECCCCCEEEEEEc-cccCCccccceEEEEC--CCceEeccc
Confidence 22223344544443 2211111246889999 666776643
No 285
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=32.48 E-value=1.9e+02 Score=26.98 Aligned_cols=49 Identities=10% Similarity=0.112 Sum_probs=29.1
Q ss_pred CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEE-EC-CEEEEEeCC
Q 014195 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQL-WR-GRLHVMGGS 230 (429)
Q Consensus 171 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~-~~lyv~GG~ 230 (429)
++.||+.-- ...+.++|+++++.+.+.+ ...+- ..++. .+ +.||+....
T Consensus 149 ~g~Lyv~d~---------~~~I~~id~~~~~v~~~~~-~~~~P-~~ia~d~~G~~lyvad~~ 199 (430)
T 3tc9_A 149 HNHLYLVGE---------QHPTRLIDFEKEYVSTVYS-GLSKV-RTICWTHEADSMIITNDQ 199 (430)
T ss_dssp EEEEEEEEB---------TEEEEEEETTTTEEEEEEC-CCSCE-EEEEECTTSSEEEEEECC
T ss_pred CCeEEEEeC---------CCcEEEEECCCCEEEEEec-CCCCc-ceEEEeCCCCEEEEEeCC
Confidence 578998831 1578899999988777643 11111 12222 23 459988643
No 286
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=31.56 E-value=3e+02 Score=24.98 Aligned_cols=61 Identities=11% Similarity=0.174 Sum_probs=32.9
Q ss_pred CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEEE--CCEEEEEeCCCCCCCCccccceEe
Q 014195 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW--RGRLHVMGGSGENRYTPEVDHWSL 244 (429)
Q Consensus 171 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~ 244 (429)
++.+++.|+. ...+..||..+.+-...-..+.....-..+.+ ++++++.|+.++ .+..|++
T Consensus 181 ~~~~l~~~~~--------d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg-----~i~iwd~ 243 (437)
T 3gre_A 181 EKSLLVALTN--------LSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRG-----IIDIWDI 243 (437)
T ss_dssp SCEEEEEEET--------TSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTS-----CEEEEET
T ss_pred CCCEEEEEeC--------CCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCC-----eEEEEEc
Confidence 4667777764 34788899887654322111101112222223 677778887653 4666763
No 287
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=31.00 E-value=3.3e+02 Score=25.41 Aligned_cols=111 Identities=7% Similarity=-0.061 Sum_probs=57.6
Q ss_pred cceeeeecCCCcccceeeeeeecCCCCe--EEecC-CCCCCCcceeeeecC-CCCcCc-------ccccccccccccCCC
Q 014195 33 ADFFWASSSKFTSSYLNIASNWSPYHNS--IILPN-NGPQKGENIGVKTKK-DVVPKR-------ILPATFQDLPAPELK 101 (429)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~yd~~~~~--~~~p~-~~~r~~~~~~~~~~~-~~~~~~-------~~~~~~~~~d~~~~~ 101 (429)
.+.+|+.-....... +.+..+|+.+.+ -.+|- ..| ++.+..-.+. +..... ...+.+..+|..+.+
T Consensus 84 ~~~vyV~n~~~~~~~-~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~ 160 (426)
T 3c75_H 84 ARRVYIQDPAHFAAI-TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL 160 (426)
T ss_dssp TTEEEEEECTTTCSS-EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCEEEEECCCcCCCC-CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc
Confidence 456888776432222 799999999999 44543 222 2222221111 111110 124568888998876
Q ss_pred eEEccCCC-CCc-----cCCcEEEE--CCEEEEEeccCCCCceeeeEEEEECCCCcee
Q 014195 102 WEKMKAAP-VPR-----LDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWG 151 (429)
Q Consensus 102 W~~~~~~p-~~R-----~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~ 151 (429)
-..--+++ .+| .-+.++.. +.++||..-. ..+.+.++|..+++=.
T Consensus 161 vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~-----~~~~VsVID~~t~kvv 213 (426)
T 3c75_H 161 PIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS-----PAPAVGVVDLEGKTFD 213 (426)
T ss_dssp EEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS-----SSCEEEEEETTTTEEE
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC-----CCCeEEEEECCCCeEE
Confidence 43211222 112 11233333 3478886321 1245899999887643
No 288
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=30.57 E-value=2.4e+02 Score=23.62 Aligned_cols=58 Identities=17% Similarity=0.258 Sum_probs=33.0
Q ss_pred ECCEEEEEeccCCCCceeeeEEEEECCCCcee--eC----CCCCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCCceeE
Q 014195 120 IKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWG--GR----FDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTF 193 (429)
Q Consensus 120 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~--~~----~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~ 193 (429)
.++++|+|=|. .+|+++.....+. .+ +.+|. ....+.. .++++|+|=| +.+|
T Consensus 27 ~~g~~yfFkg~--------~~Wr~~~~~~~~~p~~Is~~wpgLP~---~IDAA~~-~~~~~yfFkG----------~~yw 84 (219)
T 1hxn_A 27 NHGATYVFSGS--------HYWRLDTNRDGWHSWPIAHQWPQGPS---TVDAAFS-WEDKLYLIQD----------TKVY 84 (219)
T ss_dssp TTSCEEEEETT--------EEEESSSSSCTTCCEEGGGTCTTSCS---SCSEEEE-ETTEEEEEET----------TEEE
T ss_pred CCCcEEEEeCC--------EEEEEcCCCCCCCceEhhhhccCCCC---CccEEEE-ECCcEEEecC----------CEEE
Confidence 36789998662 3677765443221 11 12332 2233333 3899999955 4688
Q ss_pred EEeCCC
Q 014195 194 VLDTET 199 (429)
Q Consensus 194 ~yd~~t 199 (429)
+|+..+
T Consensus 85 ~~~~~~ 90 (219)
T 1hxn_A 85 VFLTKG 90 (219)
T ss_dssp EEECSS
T ss_pred EEeCCC
Confidence 888653
No 289
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=30.01 E-value=1.5e+02 Score=25.07 Aligned_cols=92 Identities=11% Similarity=0.086 Sum_probs=49.6
Q ss_pred ECCEEEEEeccCCCCceeeeEEEEE--CCC-------------CceeeCCCCCCCCccceeeEEE-eCCEEEEEeCeeCC
Q 014195 120 IKNLLYVFAGYGSIDYVHSHVDIYN--FTD-------------NTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGP 183 (429)
Q Consensus 120 ~~~~iyv~GG~~~~~~~~~~~~~yd--~~~-------------~~W~~~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~ 183 (429)
.++++|+|=| +.+|+|+ +.+ ..|.-++....+ .....+... .++++|+|-|
T Consensus 71 ~~g~~~fFKg--------~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p-~~IDAA~~~~~~~k~yfFkG---- 137 (227)
T 3lp9_A 71 ENNEAFIFYE--------NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFE-SGIDAAYRSTRGKEVYLFKG---- 137 (227)
T ss_dssp STTEEEEEET--------TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTT-TCCSEEEECSSTTEEEEEET----
T ss_pred CCCEEEEEeC--------CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCC-CcccEEEEECCCCEEEEEEC----
Confidence 5789999976 2478887 321 123333211001 122333333 2689999966
Q ss_pred CCCCCCceeEEEeCCCCceEeCC------CCCC------CCCCceEEE--ECCEEEEEeCC
Q 014195 184 QCRGPTAHTFVLDTETKKWQDLP------PLPV------PRYAPATQL--WRGRLHVMGGS 230 (429)
Q Consensus 184 ~~~~~~~~~~~yd~~t~~W~~~~------~~p~------~r~~~~~~~--~~~~lyv~GG~ 230 (429)
+..|+||..+++-..-- .+|. +..-.++.. .++++|+|-|.
T Consensus 138 ------~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg~ 192 (227)
T 3lp9_A 138 ------DQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKDD 192 (227)
T ss_dssp ------TEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEETT
T ss_pred ------CEEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEECC
Confidence 46899998765432211 1221 122333443 36899999774
No 290
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=27.61 E-value=2.4e+02 Score=25.96 Aligned_cols=17 Identities=18% Similarity=0.044 Sum_probs=11.8
Q ss_pred CCceEEEE-CCEEEEEeC
Q 014195 213 YAPATQLW-RGRLHVMGG 229 (429)
Q Consensus 213 ~~~~~~~~-~~~lyv~GG 229 (429)
..|+++.. ++++|.+|-
T Consensus 182 ~~hs~alt~~G~v~~wG~ 199 (406)
T 4d9s_A 182 AEHTAAVTEDGDLYGWGW 199 (406)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred CCeEEEEeCCCCEEEeeC
Confidence 34555554 789999984
No 291
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=27.19 E-value=5.7e+02 Score=26.85 Aligned_cols=114 Identities=6% Similarity=-0.052 Sum_probs=55.3
Q ss_pred ccccccccCCCeEEccCCCCCccCCcEEEECCEEEEEeccCCCCceeeeEEEEECCCCceeeCCCCCCCC-ccce--eeE
Q 014195 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREM-AHSH--LGM 167 (429)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~-~r~~--~~~ 167 (429)
.++.++....+-+++...+.. .......-+++.+++............++++|..+.+-.++...+... .|.+ .++
T Consensus 34 ~l~~~~~~gg~~~~lt~~~~~-v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~~~lt~~~~~~~~~~~~~~~~ 112 (1045)
T 1k32_A 34 DLWEHDLKSGSTRKIVSNLGV-INNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVA 112 (1045)
T ss_dssp EEEEEETTTCCEEEEECSSSE-EEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEECSEEE
T ss_pred cEEEEECCCCcEEEeeeCCCc-ccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCeEEcccCCCcccccccccccc
Confidence 455556555555554432211 011111225655555543311111346999999988766664433210 0000 223
Q ss_pred EE-eCCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCC
Q 014195 168 VT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPP 207 (429)
Q Consensus 168 ~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~ 207 (429)
+. -++++++.+..+.... ....++.+|+.+.+-..+..
T Consensus 113 ~~SpDg~ll~~~~~~~~~~--~~~~l~~~~~~~g~~~~l~~ 151 (1045)
T 1k32_A 113 GFDPDGNLIISTDAMQPFS--SMTCLYRVENDGINFVPLNL 151 (1045)
T ss_dssp EECTTCCEEEEECTTSSST--TCCEEEEEEGGGTEEEECCS
T ss_pred cCCCCCEEEEEECCcCCCc--ccceEEEEECCCCCeEEecC
Confidence 33 2556666654332211 14578888988877666543
No 292
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=26.33 E-value=5.4e+02 Score=26.32 Aligned_cols=88 Identities=17% Similarity=0.063 Sum_probs=47.1
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCC----ceee-CC-CCCCCCccceeeEEEeCCEEEEEeCeeCCCCCCCCceeEE
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDN----TWGG-RF-DMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFV 194 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~----~W~~-~~-~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~ 194 (429)
++.||+.-... ..++++++... ..+. +. .+.. + .+.++-..+++||+.-. ....+++
T Consensus 435 ~~~lY~sD~~~------~~I~~~~l~g~~~~~~~~~vi~~~l~~--P-~GLAvD~~~~~LY~tD~--------~~~~I~v 497 (791)
T 3m0c_C 435 SNRIYWSDLSQ------RMICSTQLDRAHGVSSYDTVISRDIQA--P-DGLAVDWIHSNIYWTDS--------VLGTVSV 497 (791)
T ss_dssp TTEEEEEETTT------TEEEEEEC--------CEEEECSSCSC--C-CEEEEETTTTEEEEEET--------TTTEEEE
T ss_pred CCeeEEeeccc------eeEEEEeccCCCCCcceeEEEecCCCC--c-ceeeeeecCCcEEEEec--------CCCeEEE
Confidence 57888875422 34777777642 2232 22 2322 1 13333335789999832 1468899
Q ss_pred EeCCCCceEeCC--CCCCCCCCceEEE--ECCEEEEEe
Q 014195 195 LDTETKKWQDLP--PLPVPRYAPATQL--WRGRLHVMG 228 (429)
Q Consensus 195 yd~~t~~W~~~~--~~p~~r~~~~~~~--~~~~lyv~G 228 (429)
+++....-+.+. .+..|+ ++++ .++.||+.-
T Consensus 498 ~~ldG~~~~~l~~~~l~~P~---gIaVDp~~g~LYwtD 532 (791)
T 3m0c_C 498 ADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTD 532 (791)
T ss_dssp EETTSSSEEEEEECTTCCEE---EEEEETTTTEEEEEE
T ss_pred EeCCCCeEEEEEeCCCCCcc---eEEEecCCCCEEEec
Confidence 998876554442 333333 3444 358899884
No 293
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=26.26 E-value=2.8e+02 Score=23.07 Aligned_cols=92 Identities=15% Similarity=0.212 Sum_probs=49.4
Q ss_pred CCEEEEEeccCCCCceeeeEEEEECCCCc--e-eeCCC--CCCCCccceeeEEE-eCCEEEEEeCeeCCCCCCCCceeEE
Q 014195 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNT--W-GGRFD--MPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFV 194 (429)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W-~~~~~--~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~ 194 (429)
++++|+|=| +..|+||..+.. + +.+.. +|........++.. .++++|+|-| +..|+
T Consensus 87 ~~k~yfFkG--------~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG----------~~ywr 148 (218)
T 1gen_A 87 EEKAVFFAG--------NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG----------DKFWR 148 (218)
T ss_dssp TTEEEEEET--------TEEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET----------TEEEE
T ss_pred CCEEEEEeC--------CEEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC----------CEEEE
Confidence 579999976 348889852110 0 01111 22111122333332 3689999965 46889
Q ss_pred EeCCCCceEeC-----C-C-CCCCCCCceEEEEC--CEEEEEeCC
Q 014195 195 LDTETKKWQDL-----P-P-LPVPRYAPATQLWR--GRLHVMGGS 230 (429)
Q Consensus 195 yd~~t~~W~~~-----~-~-~p~~r~~~~~~~~~--~~lyv~GG~ 230 (429)
||..+++-... . . +..+..-.++...+ +++|+|-|.
T Consensus 149 ~d~~~~~v~~gyPr~i~~~w~g~p~~idaAf~~~~~g~~YfFkg~ 193 (218)
T 1gen_A 149 YNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGA 193 (218)
T ss_dssp EETTTTEECSSCCEEHHHHSSSCCSSCSEEEECTTTCEEEEEETT
T ss_pred EECccccccCCCCcchhhccCCCCCCCCEEEEEcCCCcEEEEECC
Confidence 99877643221 1 0 11233334555554 899999774
No 294
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=25.00 E-value=2.9e+02 Score=25.33 Aligned_cols=17 Identities=18% Similarity=0.114 Sum_probs=12.0
Q ss_pred cCCcEEEE-CCEEEEEec
Q 014195 113 LDGAAIQI-KNLLYVFAG 129 (429)
Q Consensus 113 ~~~~~~~~-~~~iyv~GG 129 (429)
..|+++.. ++.||..|-
T Consensus 182 ~~hs~alt~~G~v~~wG~ 199 (406)
T 4d9s_A 182 AEHTAAVTEDGDLYGWGW 199 (406)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred CCeEEEEeCCCCEEEeeC
Confidence 35666666 569999984
No 295
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=24.35 E-value=3.8e+02 Score=23.88 Aligned_cols=115 Identities=12% Similarity=0.051 Sum_probs=60.5
Q ss_pred cccccccCCCeEEccCCCCCccCCcEEEE--CCEEEEEeccCCCCceeeeEEEEECCCCceeeCCC--CCCCCccceeeE
Q 014195 92 FQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFD--MPREMAHSHLGM 167 (429)
Q Consensus 92 ~~~~d~~~~~W~~~~~~p~~R~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~--~~~~~~r~~~~~ 167 (429)
+..+++.....+.+.+- ...-.+++.. ++.||+.--. ...++++++....-+.+.. +.. + .+.++
T Consensus 55 I~~i~~~g~~~~~~~~~--~~~~~~l~~d~~~~~ly~~D~~------~~~I~r~~~~g~~~~~~~~~~~~~--p-~glav 123 (349)
T 3v64_C 55 IRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSDVT------LDRILRANLNGSNVEEVVSTGLES--P-GGLAV 123 (349)
T ss_dssp EEEECTTSCCEEEEECS--CSCEEEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEEEECSSCSC--C-CEEEE
T ss_pred eEEEeCCCCeeEEeecC--CCceEEEEEeccccEEEEEecc------CCceEEEecCCCCceEEEeCCCCC--c-cEEEE
Confidence 44555555555443221 1112233332 5789987422 2358899998776555422 222 2 12233
Q ss_pred EEeCCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeC--CCCCCCCCCceEEEE--CCEEEEEe
Q 014195 168 VTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDL--PPLPVPRYAPATQLW--RGRLHVMG 228 (429)
Q Consensus 168 ~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~--~~~p~~r~~~~~~~~--~~~lyv~G 228 (429)
...++.||+.-.. ...+++++++...-+.+ ..+..|+ .+++- ++.||+.-
T Consensus 124 d~~~g~ly~~d~~--------~~~I~~~~~dG~~~~~l~~~~l~~P~---~iavdp~~g~ly~td 177 (349)
T 3v64_C 124 DWVHDKLYWTDSG--------TSRIEVANLDGAHRKVLLWQSLEKPR---AIALHPMEGTIYWTD 177 (349)
T ss_dssp ETTTTEEEEEETT--------TTEEEEEETTSCSCEEEECTTCSCEE---EEEEETTTTEEEEEE
T ss_pred ecCCCeEEEEcCC--------CCeEEEEcCCCCceEEEEeCCCCCcc---eEEEecCcCeEEEec
Confidence 3347899987321 45788898876543332 2233332 23333 67888884
No 296
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=22.36 E-value=4.4e+02 Score=23.93 Aligned_cols=94 Identities=7% Similarity=0.056 Sum_probs=47.5
Q ss_pred cEEEECCEEEEEeccCCCCceeeeEEEEECCCCce--eeC----CCCCCCCccceeeEEE-eCCEEEEEeCeeCCCCCCC
Q 014195 116 AAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTW--GGR----FDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGP 188 (429)
Q Consensus 116 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W--~~~----~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~ 188 (429)
+++.+++++|+|=|. .+|+++.....- ..+ +.+|. ....+... .++++|+|-|
T Consensus 185 Av~~~~g~~~fFkg~--------~~Wr~~~~~~~~~p~~I~~~wpgLP~---~iDAa~~~~~~g~~~fFkg--------- 244 (365)
T 3ba0_A 185 AVTTVGNKIFFFKDR--------FFWLKVSERPKTSVNLISSLWPTLPS---GIEAAYEIEARNQVFLFKD--------- 244 (365)
T ss_dssp CEEEETTEEEEEETT--------EEEECCSSCCCCCEEEHHHHCSSCCS---SCCEEEEEGGGTEEEEEET---------
T ss_pred eEEEcCCeEEEEeCC--------EEEEEcCCCccCCccchhhhccCCCC---CccEEEEecCCCEEEEEeC---------
Confidence 345578999998652 366776543221 011 22332 22233333 3789999955
Q ss_pred CceeEEEeCCCCc--e-EeCCC--CCCC-CCCceEEEE--CCEEEEEeCC
Q 014195 189 TAHTFVLDTETKK--W-QDLPP--LPVP-RYAPATQLW--RGRLHVMGGS 230 (429)
Q Consensus 189 ~~~~~~yd~~t~~--W-~~~~~--~p~~-r~~~~~~~~--~~~lyv~GG~ 230 (429)
+..|+|+..+.. + ..+.. +|.. ..--++... ++++|+|-|.
T Consensus 245 -~~yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG~ 293 (365)
T 3ba0_A 245 -DKYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVDN 293 (365)
T ss_dssp -TEEEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEETT
T ss_pred -CEEEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEECC
Confidence 356777654221 1 22332 2321 122233333 5899999773
No 297
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=21.85 E-value=6e+02 Score=25.28 Aligned_cols=21 Identities=19% Similarity=0.343 Sum_probs=16.0
Q ss_pred eeeEEEEECCCCceeeCCCCC
Q 014195 137 HSHVDIYNFTDNTWGGRFDMP 157 (429)
Q Consensus 137 ~~~~~~yd~~~~~W~~~~~~~ 157 (429)
..++++||..+++..++...+
T Consensus 91 ~~~~~~~d~~~~~~~~l~~~~ 111 (740)
T 4a5s_A 91 TASYDIYDLNKRQLITEERIP 111 (740)
T ss_dssp EEEEEEEETTTTEECCSSCCC
T ss_pred ceEEEEEECCCCcEEEcccCC
Confidence 356899999999887765543
No 298
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=21.14 E-value=6.4e+02 Score=25.34 Aligned_cols=39 Identities=21% Similarity=0.270 Sum_probs=24.1
Q ss_pred CceeEEEeCCC--CceEeCCCCCCCCCCceEEEECCEEEEEeCC
Q 014195 189 TAHTFVLDTET--KKWQDLPPLPVPRYAPATQLWRGRLHVMGGS 230 (429)
Q Consensus 189 ~~~~~~yd~~t--~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~ 230 (429)
.++++..|... .+|..+ .+ |+...-....++++|+....
T Consensus 268 ~~~~~~~~~~~~~~~~~~l-~~--~~~~~~~~~~~~~~~~~~~~ 308 (711)
T 4hvt_A 268 NYDNYILDTKYKNLKLQKI-NM--PSDATLQGSFKEYVFWLLRS 308 (711)
T ss_dssp CEEEEEEECSSSSCEEEEC-CS--CTTCEEEEEETTEEEEECSS
T ss_pred ceeEEEEcCCCCCCcceEe-ec--CCcceEeeeECCEEEEEECc
Confidence 46777777653 667777 22 33222245679999998654
No 299
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=20.56 E-value=7.2e+02 Score=25.67 Aligned_cols=177 Identities=10% Similarity=-0.047 Sum_probs=0.0
Q ss_pred CCEEEEEeCeeCCCCCCCCceeEEEeCCCCceEeCCCCCCCCCCceEEEECCEEEEEeCCCCCCCCccccceEeeeecCC
Q 014195 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGK 250 (429)
Q Consensus 171 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~d 250 (429)
++++++.|+. ...+..||..+.+-.....-..+....+... +++++.|+.+ ..+..|+
T Consensus 28 dg~~lAsgs~--------Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp--g~~L~S~s~D-----~~v~lWd------- 85 (902)
T 2oaj_A 28 TQNLLAIATV--------TGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK--GIYLVVINAK-----DTVYVLS------- 85 (902)
T ss_dssp TTTEEEEEET--------TSEEEEECSTTCEEEEECSSCCCEEEEEEET--TTEEEEEETT-----CEEEEEE-------
T ss_pred CCCEEEEEeC--------CCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC--CCEEEEEECc-----CeEEEEE-------
Q ss_pred ccccceeeccCCCCCCCceeEEEeCCEEEEEcccCCCCCCCCCCCccccccCCeeeeCceEEeC-CCCCeEEcC------
Q 014195 251 PLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLP------ 323 (429)
Q Consensus 251 ~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~~~------ 323 (429)
..+.+-...-. ........+..-+++.++.|+.++. +..+| .+..-....
T Consensus 86 ~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~----------------------V~lwd~~~~~~~~~~i~~~~~ 142 (902)
T 2oaj_A 86 LYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGS----------------------MIVYDIDRDQLSSFKLDNLQK 142 (902)
T ss_dssp TTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSC----------------------EEEEETTTTEEEEEEECCHHH
T ss_pred CCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCc----------------------EEEEECCCCccccceeccccc
Q ss_pred --CCCCCCCCcceeEEEECC--EEEEEcccCCCCCCccceeeeCcEEEEecCCCCeEEecccC-----------------
Q 014195 324 --SMPKPDSHIEFAWVLVNN--SIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIGKLP----------------- 382 (429)
Q Consensus 324 --~~~~~r~~~~~~~~~~~~--~i~v~GG~~~~~~~~~~~~~~~~i~~yd~~~~~W~~v~~lp----------------- 382 (429)
..+......-.+++...+ .+++.|+.++ .+ ++|.++.+-...-...
T Consensus 143 ~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg------------~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (902)
T 2oaj_A 143 SSFFPAARLSPIVSIQWNPRDIGTVLISYEYV------------TL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEK 209 (902)
T ss_dssp HHTCSSSCCCCCCEEEEETTEEEEEEEECSSC------------EE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSC
T ss_pred cccccccCCCCeEEEEEccCCCCEEEEEeCCC------------cE-EEECCCCceEEEEecccCCcCCCcccccccccc
Q ss_pred -cceeeeeeEEECCEEEEEcccCC
Q 014195 383 -YRVKTTLAGYWNGWLYFTSGQRD 405 (429)
Q Consensus 383 -~~r~~~~~~~~~~~i~v~GG~~~ 405 (429)
...-...+...++++++.|+.+.
T Consensus 210 h~~~V~~v~fspdg~~lasgs~Dg 233 (902)
T 2oaj_A 210 RTPKVIQSLYHPNSLHIITIHEDN 233 (902)
T ss_dssp BCCCEEEEEECTTSSEEEEEETTC
T ss_pred cCCCeEEEEEcCCCCEEEEEECCC
No 300
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=20.27 E-value=5.1e+02 Score=23.88 Aligned_cols=95 Identities=8% Similarity=-0.013 Sum_probs=47.9
Q ss_pred cccccccccCCCeEEccCCCCCccCCcEEEE--CCEEEEEeccCCCCceeeeEEEEECCCCcee---eCCCCCCCCccce
Q 014195 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWG---GRFDMPREMAHSH 164 (429)
Q Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~R~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~---~~~~~~~~~~r~~ 164 (429)
..+..+|+..+..+.+.. ...+ -..++.- ++.||+..-.++.. ...+..++.. ..|. .++.+.. -
T Consensus 159 ~~I~~id~~~~~v~~~~~-~~~~-P~~ia~d~~G~~lyvad~~~~~~--~~~v~~~~~~-g~~~~~~~l~~~~~-----p 228 (430)
T 3tc9_A 159 HPTRLIDFEKEYVSTVYS-GLSK-VRTICWTHEADSMIITNDQNNND--RPNNYILTRE-SGFKVITELTKGQN-----C 228 (430)
T ss_dssp EEEEEEETTTTEEEEEEC-CCSC-EEEEEECTTSSEEEEEECCSCTT--SEEEEEEEGG-GTSCSEEEEEECSS-----C
T ss_pred CcEEEEECCCCEEEEEec-CCCC-cceEEEeCCCCEEEEEeCCCCcc--cceEEEEeCC-CceeeeeeeccCCC-----c
Confidence 445566666655554433 1111 1122222 34588876543321 2235666654 3343 2332222 2
Q ss_pred eeEEEe--CCEEEEEeCeeCCCCCCCCceeEEEeCCCCce
Q 014195 165 LGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKW 202 (429)
Q Consensus 165 ~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W 202 (429)
+++++. ++.||+.-- ....+++||+.+..-
T Consensus 229 ~giavdp~~g~lyv~d~--------~~~~V~~~~~~~~~~ 260 (430)
T 3tc9_A 229 NGAETHPINGELYFNSW--------NAGQVFRYDFTTQET 260 (430)
T ss_dssp CCEEECTTTCCEEEEET--------TTTEEEEEETTTTEE
T ss_pred eEEEEeCCCCEEEEEEC--------CCCEEEEEECCCCcE
Confidence 444554 578888731 145799999987765
Done!