Your job contains 1 sequence.
>014196
MSIPSSSYMRLQFFSRIRQFIQSKSARRRQNEPNHNHEKSRTLKNINCQEEKQVIIEEKN
HEQSDIEEDDCVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLV
SMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAVDESTRHEFGELL
LSLSSLANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVLDNARPMVSNGV
VHTLLKLCSMKERLSEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEILTWEEKPKCQEL
SAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKDERQAKMGP
HSGPQTRRVSIGSPVSPREAQEGKKMMKNLVQQSLHKNLEMITRRANAAADSSKLKSLVI
STSCKSLPY
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014196
(429 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2038598 - symbol:AT2G27430 "AT2G27430" species... 1142 7.1e-116 1
TAIR|locus:2116792 - symbol:AT4G31890 "AT4G31890" species... 387 4.5e-38 2
TAIR|locus:2040214 - symbol:AT2G25130 species:3702 "Arabi... 358 8.5e-33 1
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 217 1.5e-15 2
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie... 220 5.4e-15 1
TAIR|locus:2135788 - symbol:AT4G12710 species:3702 "Arabi... 196 7.1e-13 1
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi... 191 9.5e-12 1
TAIR|locus:2099634 - symbol:AT3G03440 "AT3G03440" species... 183 2.2e-11 1
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 184 3.9e-11 1
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 183 5.3e-11 1
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 174 5.1e-10 1
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 181 5.3e-10 2
TAIR|locus:2145653 - symbol:AT5G14510 species:3702 "Arabi... 167 7.9e-10 1
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 168 3.3e-09 1
TAIR|locus:2096687 - symbol:AT3G01400 species:3702 "Arabi... 160 6.4e-09 1
TAIR|locus:2178818 - symbol:AT5G58680 "AT5G58680" species... 157 1.4e-08 1
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 161 1.6e-08 1
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 157 4.1e-08 1
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 155 7.2e-08 1
TAIR|locus:2130699 - symbol:AT4G16490 "AT4G16490" species... 150 1.5e-07 1
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 150 2.8e-07 1
TAIR|locus:2146183 - symbol:AT5G18320 species:3702 "Arabi... 144 6.7e-07 1
TAIR|locus:2198235 - symbol:AT1G01830 "AT1G01830" species... 137 1.1e-06 2
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 130 4.4e-05 1
TAIR|locus:2043709 - symbol:AT2G45720 "AT2G45720" species... 122 0.00024 1
>TAIR|locus:2038598 [details] [associations]
symbol:AT2G27430 "AT2G27430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR016024 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AY169003 EMBL:AY954802 IPI:IPI00540469
RefSeq:NP_180312.2 UniGene:At.38764 ProteinModelPortal:Q8GUS7
SMR:Q8GUS7 PRIDE:Q8GUS7 EnsemblPlants:AT2G27430.1 GeneID:817288
KEGG:ath:AT2G27430 TAIR:At2g27430 eggNOG:NOG235856
HOGENOM:HOG000241608 InParanoid:Q8GUS7 OMA:KNMEMIT PhylomeDB:Q8GUS7
ProtClustDB:CLSN2690947 Genevestigator:Q8GUS7 Uniprot:Q8GUS7
Length = 438
Score = 1142 (407.1 bits), Expect = 7.1e-116, P = 7.1e-116
Identities = 240/433 (55%), Positives = 315/433 (72%)
Query: 2 SIPSSSYMRLQFFSRIRQFIQSKSARRRQNEPNHNHEKSRTLKNINCQEEKQVIIEEKNH 61
S+ YM+L FF++IR ++SK++ R+ N EKSRT ++ EK + E+
Sbjct: 12 SVWQLQYMKLNFFTKIRCLLKSKASFRKSNL-QALPEKSRTYQDF----EKVAALPEEIV 66
Query: 62 EQSDIEEDDCVLLQKSVKRLHFGSWXXXXXXXXXXXXXXXXDVKIKKLMAELGVIQMLVS 121
+ +E++ V+LQK+VK++HFGSW D K +KLMAELGVIQ+LVS
Sbjct: 67 SKPPEDENEEVVLQKTVKKIHFGSWEEKEKAAIEIEKLAREDKKTRKLMAELGVIQILVS 126
Query: 122 MVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAVDESTRHEFGEXXX 181
MV+++V G ++AA+ ALIQL++GTYTNKA+MV A I +KLPKNV+ +D+STRH F E
Sbjct: 127 MVASDVSGHQKAAVNALIQLSHGTYTNKALMVNADICSKLPKNVEVLDQSTRHAFAELLL 186
Query: 182 XXXXXANTHIPLSSSEILPFLVGILESGSS-VETKELCIGALYNLSAVLDNARPMVSNGV 240
NT +P++SS+ILPFL+ + S S+ ++TKE+C+ + NL VL+NA P+V NG
Sbjct: 187 SLSSLTNTQLPVASSQILPFLMDTMNSDSTDMKTKEICLATISNLCLVLENAGPLVLNGA 246
Query: 241 VHTLLKLCSMKERLSEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEILTWEEKPKCQEL 300
V TLL L S K+ LSEK+LA+LG LVVT GKKAMED LV + LIEILTWE+ PKCQE
Sbjct: 247 VETLLSLMSTKD-LSEKALASLGKLVVTQMGKKAMEDCLLVSKGLIEILTWEDIPKCQEY 305
Query: 301 SAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKDERQAKMGP 360
+AYILM+LAHQS QR+KMAK+GIV V L+++LLGSPL Q+RA KLLQWFKDER +MGP
Sbjct: 306 AAYILMVLAHQSWSQREKMAKAGIVPVLLEVSLLGSPLVQKRAVKLLQWFKDERNVRMGP 365
Query: 361 HSGPQTRRVS--IGSPVSPREAQEGKKMMKNLVQQSLHKNLEMITRRANA--AADSSKLK 416
HSGPQT VS +GSP+SPR +EG+KMMKNLV+QSL+KN+EMITRR N ++S +LK
Sbjct: 366 HSGPQTGWVSPGMGSPMSPRSGEEGRKMMKNLVKQSLYKNMEMITRRGNLDMESESCRLK 425
Query: 417 SLVISTSCKSLPY 429
SL+ISTS KSL Y
Sbjct: 426 SLIISTSSKSLTY 438
>TAIR|locus:2116792 [details] [associations]
symbol:AT4G31890 "AT4G31890" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000225 InterPro:IPR016024 SMART:SM00185 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161579 EMBL:AL049607 HOGENOM:HOG000243144
ProtClustDB:CLSN2683147 EMBL:BT033029 EMBL:AK228494 IPI:IPI00537660
PIR:T06311 RefSeq:NP_001190883.1 RefSeq:NP_194917.1
UniGene:At.44088 ProteinModelPortal:Q9SZ56 SMR:Q9SZ56 PRIDE:Q9SZ56
EnsemblPlants:AT4G31890.1 EnsemblPlants:AT4G31890.2 GeneID:829319
KEGG:ath:AT4G31890 TAIR:At4g31890 eggNOG:NOG319234
InParanoid:Q9SZ56 OMA:ASRILEC PhylomeDB:Q9SZ56 ArrayExpress:Q9SZ56
Genevestigator:Q9SZ56 Uniprot:Q9SZ56
Length = 518
Score = 387 (141.3 bits), Expect = 4.5e-38, Sum P(2) = 4.5e-38
Identities = 116/350 (33%), Positives = 187/350 (53%)
Query: 103 DVKIKKLMAELGVIQMLVSMVS-TEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKL 161
D + + +A LG I LVSM+ + ++ + A++ AL+ L G NKA +V+AG + K+
Sbjct: 174 DSEARVTLAMLGAIPPLVSMIDDSRIVDAQIASLYALLNLGIGNDANKAAIVKAGAVHKM 233
Query: 162 PKNVDAVDESTRHEFGEXXXXXX---XXANTHIPL-SSSEILPFLVGILES---GSSVET 214
K +++ + + E E +++ P+ SS + FLV L++ SS +
Sbjct: 234 LKLIESPNTPDQ-EIAEAVVANFLGLSALDSNKPIIGSSGAIIFLVKTLQNLDETSSSQA 292
Query: 215 KELCIGALYNLSAVLDNARPMVSNGVVHTLLKLCSMKERLSEKSLATLGNLVVTSTGKKA 274
+E + ALYNLS N ++ ++ LL E +SE+ LA L NLV G+KA
Sbjct: 293 REDALRALYNLSIYQPNVSFILETDLITYLLNTLGDME-VSERILAILSNLVAVPEGRKA 351
Query: 275 MEDSPLVPES---LIEILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQL 331
+ LV ++ L+++L W + P CQE + YILM++AH+ R M ++GI L+L
Sbjct: 352 IG---LVCDAFPVLVDVLNWTDSPGCQEKATYILMLMAHKGYGDRQVMIEAGIESALLEL 408
Query: 332 ALLGSPLAQRRASKLLQWFKDERQAKM-------GPHSGP--QTRRVSIGSPVSPREAQE 382
LLGS LAQ+RAS++L+ + ++ ++ G S P TR + + E
Sbjct: 409 TLLGSALAQKRASRILECLRVDKGKQVLDSTGSCGALSAPIYGTRDNGLDHEENDLMMSE 468
Query: 383 GKKMMKNLVQQSLHKNLEMITRRANAAAD---SSKLKSLVISTSCKSLPY 429
+K +K LVQQSL N++ I +RAN D S KSL +S++ KSLP+
Sbjct: 469 ERKAVKQLVQQSLQSNMKRIVKRANLPQDFVPSEHFKSLSLSSTSKSLPF 518
Score = 37 (18.1 bits), Expect = 4.5e-38, Sum P(2) = 4.5e-38
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 11 LQFFSRIRQFIQSKSARRRQNEPNHNHEKSRT 42
L+ R+ + +QS +A R N+ + K T
Sbjct: 131 LEVLKRVVRELQSAAAAREDNDDGGDCRKKIT 162
>TAIR|locus:2040214 [details] [associations]
symbol:AT2G25130 species:3702 "Arabidopsis thaliana"
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0019894 "kinesin
binding" evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
PROSITE:PS50176 SMART:SM00185 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AY144104 EMBL:AY649296 IPI:IPI00540631
PIR:F84644 RefSeq:NP_180085.1 UniGene:At.39061
ProteinModelPortal:Q8H1N2 SMR:Q8H1N2 PaxDb:Q8H1N2 PRIDE:Q8H1N2
EnsemblPlants:AT2G25130.1 GeneID:817051 KEGG:ath:AT2G25130
TAIR:At2g25130 eggNOG:NOG238592 HOGENOM:HOG000243144
InParanoid:Q8H1N2 OMA:GRERGHD PhylomeDB:Q8H1N2
ProtClustDB:CLSN2683147 Genevestigator:Q8H1N2 Uniprot:Q8H1N2
Length = 468
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 106/320 (33%), Positives = 167/320 (52%)
Query: 103 DVKIKKLMAELGVIQMLVSMVSTEVIGRRR--AAIKALIQLANGTYTNKAIMVEAGILTK 160
D++ + +A LG I LVSM+ E A++ AL+ L G NKA +V+AG++ K
Sbjct: 140 DIEARVTLAMLGAIPPLVSMIDDESQSEDALIASLYALLNLGIGNDVNKAAIVKAGVVHK 199
Query: 161 LPKNVDAVDESTRHEFGEXXXXXX---XXANTHIPL-SSSEILPFLVGIL---ESGSSVE 213
+ K V++ + E +++ P+ SS + FLV L E SS +
Sbjct: 200 MLKLVES-SKPPNQAIAEAIVANFLGLSALDSNKPIIGSSGAIIFLVKTLKNFEETSSSQ 258
Query: 214 TKELCIGALYNLSAVLDNARPMVSNGVVHTLLKLCSMKERLSEKSLATLGNLVVTSTGKK 273
+E + ALYNLS N ++ ++ LL E +SE+ LA L N+V G+K
Sbjct: 259 AREDALRALYNLSIYHQNVSFILETDLIPFLLNTLGDME-VSERILAILTNVVSVPEGRK 317
Query: 274 AMEDSPLVPESLIEILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLAL 333
A+ + L+++L W + KCQE + YILM++AH+ R+ M ++GI L+L L
Sbjct: 318 AIGEVVEAFPILVDVLNWNDSIKCQEKAVYILMLMAHKGYGDRNAMIEAGIESSLLELTL 377
Query: 334 LGSPLAQRRASKLLQWFK--DERQAKMGPHSGPQTRRVSIGSPVSPREAQEGKKMMKNLV 391
+GSPLAQ+RAS++L+ + D+ + P G + G + R E +K +K LV
Sbjct: 378 VGSPLAQKRASRVLECLRVVDKGKQVSAPIYGTSSLGRERGHDL--RMTDE-RKAVKQLV 434
Query: 392 QQSLHKNLEMITRRANAAAD 411
QQSL N++ I +RAN D
Sbjct: 435 QQSLQSNMKRIVKRANLPHD 454
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 217 (81.4 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 82/319 (25%), Positives = 145/319 (45%)
Query: 103 DVKIKKLMAELGVIQMLVSMVSTEVIGRRRAA----IKALIQLANGTYTNKAIMVEAGIL 158
D + + M G ++ L+ + + V AA AL LA NK +M+ +G++
Sbjct: 455 DEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVNNNRNKELMLTSGVI 514
Query: 159 TKLPKNVDAVDESTRHEFGEXXXXXXXXANTHIPLSSSEILPFLVGILESGSSVETKELC 218
L K + + + A + I SS+ +PFLV +L+ + K
Sbjct: 515 RLLEKMISSAESHGSATALYLNLSCLDEAKSVI--GSSQAVPFLVQLLQKEIETQCKLDA 572
Query: 219 IGALYNLSAVLDNARPMVSNGVVHTLLKL-CSMKERL-SEKSLATLGNLVVTSTGKKAME 276
+ ALYNLS N ++S+ ++ +L L S E L EKSLA L NL + GK
Sbjct: 573 LHALYNLSTYSPNIPALLSSNIIKSLQGLLASTGENLWIEKSLAVLLNLASSQEGKDEAV 632
Query: 277 DSPLVPESLIEILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGS 336
S + SL +L + + QE + L+IL + + + G++ + +++ G+
Sbjct: 633 SSQGMISSLATVLDMGDTTE-QEQAVSCLLILCNGRESCIQMVLQEGVIPSLVSISVNGT 691
Query: 337 PLAQRRASKLLQWFKDERQAKMGPHSG----PQTR--RVSIGSPVSPREAQEGKKMMKNL 390
P + ++ KLL F++ERQ + P S PQ R S+ +P+S + +++
Sbjct: 692 PRGREKSQKLLMLFREERQQRDQPSSNRDEPPQKEPARKSLSAPLSVHGSTPASASVQDY 751
Query: 391 VQQSLHKNLEMITRRANAA 409
+ L K++ +RR + A
Sbjct: 752 EPRVLSKSM---SRRKSMA 767
Score = 52 (23.4 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 11/53 (20%), Positives = 26/53 (49%)
Query: 18 RQFIQSKSARRRQNEPNHNHEKSRTLKNINCQEEKQVIIEEKNHEQSDIEEDD 70
R + + + Q+ + K + +K + +E ++E +N E+S + +DD
Sbjct: 360 RLALSDSESTKSQSVNSIGSYKLKGVKIVPLEENGTTVVERQNTEESFVSDDD 412
>TAIR|locus:2010424 [details] [associations]
symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
Length = 768
Score = 220 (82.5 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 81/304 (26%), Positives = 143/304 (47%)
Query: 103 DVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIK----ALIQLANGTYTNKAIMVEAGIL 158
D + + LM E G ++ L+ + + + +A K AL LA NK +M+ +GI+
Sbjct: 453 DEEARILMGENGCVEALLQFLGSALNENNASAQKVGAMALFNLAVDNNRNKELMLASGII 512
Query: 159 TKLPKNVDAVDESTRHEFGEXXXXXXXXA--NTHIP-LSSSEILPFLVGILESGSSVETK 215
L + + H G + P + SS +PF+V +L + + V+ K
Sbjct: 513 PLLEEML-----CNPHSHGSVTAIYLNLSCLEEAKPVIGSSLAVPFMVNLLWTETEVQCK 567
Query: 216 ELCIGALYNLSAVLDNARPMVSNGVVHTLLKLC-SMKERLSEKSLATLGNLVVTSTGKKA 274
+ +L++LS N ++S +V+ L L S ++R +EKSLA L NLV+ GK
Sbjct: 568 VDALHSLFHLSTYPPNIPCLLSADLVNALQSLTISDEQRWTEKSLAVLLNLVLNEAGKDE 627
Query: 275 MEDSPLVPESLIEILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALL 334
M +P + +L IL E P QE + +L+IL + S + + + G++ + +++
Sbjct: 628 MVSAPSLVSNLCTILDTGE-PNEQEQAVSLLLILCNHSEICSEMVLQEGVIPSLVSISVN 686
Query: 335 GSPLAQRRASKLLQWFKDERQAKMGPHSGPQTRRVSI---GSPVSPREAQEGKKMMKNLV 391
G+ + RA KLL F++ RQ + PQ V+ G V+ E K K+
Sbjct: 687 GTQRGRERAQKLLTLFRELRQRDQTHLTEPQHTEVTSPEDGFSVASAAVTETKPQCKSAS 746
Query: 392 QQSL 395
++ +
Sbjct: 747 RKKM 750
>TAIR|locus:2135788 [details] [associations]
symbol:AT4G12710 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049640 EMBL:AL161534 HOGENOM:HOG000237435
EMBL:BT026433 EMBL:AK228965 IPI:IPI00547137 PIR:T06629
RefSeq:NP_193007.1 UniGene:At.33450 ProteinModelPortal:Q9SU15
SMR:Q9SU15 EnsemblPlants:AT4G12710.1 GeneID:826883
KEGG:ath:AT4G12710 TAIR:At4g12710 eggNOG:NOG281035
InParanoid:Q9SU15 OMA:MVHRSME PhylomeDB:Q9SU15
ProtClustDB:CLSN2685767 Genevestigator:Q9SU15 Uniprot:Q9SU15
Length = 402
Score = 196 (74.1 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 80/319 (25%), Positives = 155/319 (48%)
Query: 110 MAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAVD 169
+A+ GVI LV M+ + + R A++ AL+ LA NK +V+AG + L + + +
Sbjct: 86 LADAGVIPPLVPMLFSSNVDARHASLLALLNLAVRNERNKIEIVKAGAVPPLIQILKLHN 145
Query: 170 ESTRHEFGEXXXXXXXXANTH-IPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAV 228
S R E A + + SS + P L+ +L SG+ V+ K + AL+NLSA
Sbjct: 146 ASLR-ELATAAILTLSAAPANKAMIISSGVPPLLIQMLSSGT-VQGKVDAVTALHNLSAC 203
Query: 229 LDNARPMVSNGVVHTL---LKLCSMKERLSEKSLATLGNLVVTST-GKKAM---EDSPLV 281
+ + P++ V+ L LK C + +EK+ A + ++ S G+ A+ ED L
Sbjct: 204 KEYSAPILDAKAVYPLIHLLKECKKHSKFAEKATALVEMILSHSEDGRNAITSCEDGIL- 262
Query: 282 PESLIEILTWEEKPKCQELSAYILMILAHQSSEQRDKMA-KSGIVHVSLQLALLGSPLAQ 340
+L+E + + P E + L+ L ++ K+ K G + L + G+ ++
Sbjct: 263 --TLVETVE-DGSPLSIEHAVGALLSLCRSDRDKYRKLILKEGAIPGLLSSTVDGTSKSR 319
Query: 341 RRASKLLQWFKDE-RQAKMGPHSGPQ-TRRVSIGSPVSPREAQEGKKMMKNLVQQSLHKN 398
RA LL ++ R+ +M P + + +++ + + A+ KK+++++V +S+ +
Sbjct: 320 DRARVLLDLLRETPREKEMTPLTLEKIVYGIAVQVDGAEKAAETAKKLLQDMVHRSMELS 379
Query: 399 LEMITRRANAAADSSKLKS 417
++ I +A + A + S
Sbjct: 380 MKSIQHKAASCASIPDISS 398
>TAIR|locus:2032472 [details] [associations]
symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
Length = 771
Score = 191 (72.3 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 70/282 (24%), Positives = 126/282 (44%)
Query: 116 IQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAVDESTRHE 175
+Q L S V + AL LA NK +M+ +G++ L K + ++
Sbjct: 472 LQFLESAVHDNNAAAQETGAMALFNLAVNNNRNKELMLTSGVIPLLEKMISC--SQSQGP 529
Query: 176 FGEXXXXXXXXANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVLDNARPM 235
+ SS+ + F V +L + + K + ALYNLS N +
Sbjct: 530 ATALYLNLSCLEKAKPVIGSSQAVSFFVNLLLQDTKTQCKLDALHALYNLSTYSPNIPTL 589
Query: 236 VSNGVVHTLLKLCSMKERL-SEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEILTWEEK 294
+S+ ++ +L L S L EKSLA L NL + GK+ M + + +L +L +
Sbjct: 590 LSSNIIKSLQVLASTGNHLWIEKSLAVLLNLASSREGKEEMITTQGMISTLATVLDTGDT 649
Query: 295 PKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKDER 354
+ QE + L+IL S + + G++ + +++ GSP + ++ KLL F+++R
Sbjct: 650 VE-QEQAVSCLVILCTGSESCIQMVLQEGVIPSLVSISVNGSPRGRDKSQKLLMLFREQR 708
Query: 355 QAKM-GPHSGPQTRR-----VSIGSPVSPREAQEGKKMMKNL 390
P+ R+ ++I +PVS E+ E K + K++
Sbjct: 709 HRDQPSPNKEEAPRKTVSAPMAIPAPVSAPES-EVKPLTKSI 749
>TAIR|locus:2099634 [details] [associations]
symbol:AT3G03440 "AT3G03440" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR000225 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 EMBL:CP002686
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
IPI:IPI00522077 RefSeq:NP_186994.2 UniGene:At.40980
ProteinModelPortal:F4J139 SMR:F4J139 EnsemblPlants:AT3G03440.1
GeneID:821253 KEGG:ath:AT3G03440 OMA:VRDERNK Uniprot:F4J139
Length = 408
Score = 183 (69.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 74/306 (24%), Positives = 144/306 (47%)
Query: 116 IQMLVSMVSTEVI-GRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAVDESTRH 174
++ LVSM+ + AA+ AL+ LA NK ++EAG L + + + + T
Sbjct: 106 VEPLVSMLRFDSPESHHEAALLALLNLAVKDEKNKVSIIEAGALEPIINFLQS-NSPTLQ 164
Query: 175 EFGEXXXXXXXXANTHIPL-SSSEILPFLVGILESGSSVETKELCIGALYNLSAVLDNAR 233
E+ + + P+ ++ ++P LV +++ GS + K + AL NLS + DN
Sbjct: 165 EYASASLLTLSASANNKPIIGANGVVPLLVKVIKHGSP-QAKADAVMALSNLSTLPDNLS 223
Query: 234 PMVSN---GVVHTLLKLCSMKERLSEKSLATLGNLVVTS----TGKKAMEDSPLVPESLI 286
+++ + LLK + SEK + + L+V+ TG + E L +++
Sbjct: 224 MILATKPLSPILNLLKSSKKSSKTSEKCCSLIEALMVSGEEARTGLVSDEGGVL---AVV 280
Query: 287 EILTWEEKPKCQELSAYILMILAHQS-SEQRDKMAKSGIVHVSLQLALLGSPLAQRRASK 345
E+L + +E + +L+ L S+ R+ + + G++ L+L + G+ ++ +A +
Sbjct: 281 EVLE-NGSLQAREHAVGVLLTLCQSDRSKYREPILREGVIPGLLELTVQGTSKSRIKAQR 339
Query: 346 LLQWFKDERQAKMGPHSGPQTRRVSIGSPVSPREA--QEGK--KMMKNLVQQSLHKNLEM 401
LL ++ + P T + S +S + Q GK KM+ +VQ S+ K+L
Sbjct: 340 LLCLLRNSESPRSEVQ--PDTIENIVSSLISHIDGDDQSGKAKKMLAEMVQVSMEKSLRH 397
Query: 402 ITRRAN 407
+ RA+
Sbjct: 398 LQERAS 403
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 184 (69.8 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 64/243 (26%), Positives = 119/243 (48%)
Query: 109 LMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTY-TNKAIMVEAGILTKLPKNVDA 167
L+AE G I +LV+++++E + + AI ++ L+ Y NK +++ AG +T + + + A
Sbjct: 368 LIAEAGAIPVLVNLLTSEDVATQENAITCVLNLS--IYENNKELIMFAGAVTSIVQVLRA 425
Query: 168 VDESTRHEFGEXXXXXXXXANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSA 227
R I + S +P LV +LE+G+ K+ AL+NL
Sbjct: 426 GTMEARENAAATLFSLSLADENKIIIGGSGAIPALVDLLENGTPRGKKDAAT-ALFNLCI 484
Query: 228 VLDNARPMVSNGVVHTLLKLCS--MKERLSEKSLATLGNLVVTSTGKKAMEDSPLVPESL 285
N V G+V L+K+ S + R+ +++L L L K A+ + +P +L
Sbjct: 485 YHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAKSAIVKANTLP-AL 543
Query: 286 IEILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASK 345
I IL ++ + +E +A IL+ L + +E+ + + G V + L+ G+ +R+A
Sbjct: 544 IGILQTDQT-RNRENAAAILLSLCKRDTEKLITIGRLGAVVPLMDLSKNGTERGKRKAIS 602
Query: 346 LLQ 348
LL+
Sbjct: 603 LLE 605
Score = 121 (47.7 bits), Expect = 0.00036, P = 0.00036
Identities = 52/229 (22%), Positives = 101/229 (44%)
Query: 108 KLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDA 167
K ++ VI+ LV +S+ RR A+ + L+ + N+ ++ EAG + L + +
Sbjct: 325 KNSGDMSVIRALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTS 384
Query: 168 VDESTRHEFGEXXXXXXXXANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSA 227
D +T+ N + + + +V +L +G+ +E +E L++LS
Sbjct: 385 EDVATQENAITCVLNLSIYENNKELIMFAGAVTSIVQVLRAGT-MEARENAAATLFSLSL 443
Query: 228 VLDNARPMVSNGVVHTLLKLCSMKERLSEKSLAT-LGNLVVTSTGKKAMEDSPLVPESLI 286
+N + +G + L+ L +K AT L NL + G K + +L+
Sbjct: 444 ADENKIIIGGSGAIPALVDLLENGTPRGKKDAATALFNLCIYH-GNKGRAVRAGIVTALV 502
Query: 287 EILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLG 335
++L+ + + + + IL +LA+ AKS IV + AL+G
Sbjct: 503 KMLSDSTRHRMVDEALTILSVLANNQD------AKSAIVKANTLPALIG 545
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 183 (69.5 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 65/254 (25%), Positives = 126/254 (49%)
Query: 109 LMAELGVIQMLVSMVSTEV-IGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDA 167
L+AE G I +LV +++++ + A+ ++ L+ + NK +++ AG +T + + A
Sbjct: 378 LIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYEH-NKELIMLAGAVTSIVLVLRA 436
Query: 168 VDESTRHEFGEXXXXXXXXANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSA 227
R I + +S + LV +L+ GS V K+ AL+NL
Sbjct: 437 GSMEARENAAATLFSLSLADENKIIIGASGAIMALVDLLQYGS-VRGKKDAATALFNLCI 495
Query: 228 VLDNARPMVSNGVVHTLLKLC--SMKERLSEKSLATLGNLVVTSTGKKAMEDSPLVPESL 285
N V G+V L+K+ S ER+++++L L L K A+ + +P L
Sbjct: 496 YQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTILSVLASNQVAKTAILRANAIPP-L 554
Query: 286 IEILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASK 345
I+ L +++P+ +E +A IL+ L + +E+ + + G V ++L+ G+ A+R+A+
Sbjct: 555 IDCLQ-KDQPRNRENAAAILLCLCKRDTEKLISIGRLGAVVPLMELSRDGTERAKRKANS 613
Query: 346 LLQWFKDERQAKMG 359
LL+ + + K+G
Sbjct: 614 LLELLRKSSR-KLG 626
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 47/210 (22%), Positives = 94/210 (44%)
Query: 103 DVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLP 162
D + L ++ I+ LV +S++ I RR A+ + L+ + N+ ++ EAG + L
Sbjct: 330 DGSFRDLSGDMSAIRALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLV 389
Query: 163 KNV--DAVDESTRHEFGEXXXXXXXXANTHIPLSSSEILPFLVGILESGSSVETKELCIG 220
K + D E+ + N + + + + ++ +L +GS +E +E
Sbjct: 390 KLLTSDGDTETQENAVTCILNLSIYEHNKELIMLAGAVTSIVL-VLRAGS-MEARENAAA 447
Query: 221 ALYNLSAVLDNARPMVSNGVVHTLLKLCSMKERLSEKSLAT-LGNLVVTSTGKKAMEDSP 279
L++LS +N + ++G + L+ L +K AT L NL + G K
Sbjct: 448 TLFSLSLADENKIIIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQ-GNKGRAVRA 506
Query: 280 LVPESLIEILTWEEKPKCQELSAYILMILA 309
+ + L+++LT + + + IL +LA
Sbjct: 507 GIVKPLVKMLTDSSSERMADEALTILSVLA 536
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 174 (66.3 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 70/304 (23%), Positives = 132/304 (43%)
Query: 46 INCQEEKQVIIEEKNHEQSDIEEDDCVLLQKSVKRLHFGSWXXXXXXXXXXXXXXXXDVK 105
I + KQ ++K + SD + V L + RL G+ +V
Sbjct: 300 IELPKNKQNSRDKKAAKSSDYDHAGLVSL---MNRLRSGNQDEQRAAAGEIRLLAKRNVN 356
Query: 106 IKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNV 165
+ +AE G I +LV+++S+ + A+ AL+ L+ NKA +V++ + K+ + +
Sbjct: 357 NRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIHE-NNKASIVDSHAIPKIVEVL 415
Query: 166 DAVDESTRHEFGEXXXXXXXXANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNL 225
TR + + ++ +P L+ +L GS K+ A++NL
Sbjct: 416 KTGSMETRENAAATLFSLSVVDENKVTIGAAGAIPPLINLLCDGSPRGKKDAAT-AIFNL 474
Query: 226 SAVLDNARPMVSNGVV-HTLLKLCSMKERLSEKSLATLGNLVVTSTGKKAMEDSPLVPES 284
N V G+V H + L + +++L+ L L GK + S +P
Sbjct: 475 CIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEALSLLSILAGNPEGKIVIARSEPIPP- 533
Query: 285 LIEILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRAS 344
L+E++ P+ +E +A IL +L +EQ +G+ +L+ G+ A+R+AS
Sbjct: 534 LVEVIK-TGSPRNRENAAAILWLLCSADTEQTLAAKAAGVEDALKELSETGTDRAKRKAS 592
Query: 345 KLLQ 348
+L+
Sbjct: 593 SILE 596
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 181 (68.8 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 66/307 (21%), Positives = 131/307 (42%)
Query: 53 QVIIEEKNHEQSDIEEDDCVLLQKSVKRLHFGSWXXXXXXXXXXXXXXXXDVKIKKLMAE 112
+++ N + D+ E + ++K V+ L S ++ + ++
Sbjct: 526 RIVSAPSNETRRDLSEVE-TQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGN 584
Query: 113 LGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAVDEST 172
G I +LV ++ + + A+ AL+ L+ KAI +AG + L ++
Sbjct: 585 SGAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAI-ADAGAIEPLIHVLENGSSEA 643
Query: 173 RHEFGEXXXXXXXXANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVLDNA 232
+ I + S + LV +L +G+ K+ AL+NLS +N
Sbjct: 644 KENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAAT-ALFNLSIHQENK 702
Query: 233 RPMVSNGVVHTLLKLCSMKERLSEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEILTWE 292
+V +G V L+ L + +K++A L NL G+ A+ +P L+E++
Sbjct: 703 AMIVQSGAVRYLIDLMDPAAGMVDKAVAVLANLATIPEGRNAIGQEGGIP-LLVEVVELG 761
Query: 293 EKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKD 352
+ +E +A L+ L+ S + + + G V + L+ G+P A+ +A LL +F++
Sbjct: 762 SA-RGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQSGTPRAREKAQALLSYFRN 820
Query: 353 ERQAKMG 359
+R G
Sbjct: 821 QRHGNAG 827
Score = 39 (18.8 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 10/40 (25%), Positives = 16/40 (40%)
Query: 25 SARRRQNEPNHNHEKSRTLKNINCQEEKQVIIEEKNHEQS 64
S Q NH+H ++ +E + E N E+S
Sbjct: 430 SVENGQTSENHHHRSPSATSTVSNEEFPRADANE-NSEES 468
>TAIR|locus:2145653 [details] [associations]
symbol:AT5G14510 species:3702 "Arabidopsis thaliana"
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=RCA] [GO:0010014 "meristem initiation" evidence=RCA]
[GO:0010089 "xylem development" evidence=RCA] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR016024
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AL163817 IPI:IPI00537670
PIR:T48624 RefSeq:NP_196955.1 UniGene:At.31922
ProteinModelPortal:Q9LY78 SMR:Q9LY78 PRIDE:Q9LY78
EnsemblPlants:AT5G14510.1 GeneID:831302 KEGG:ath:AT5G14510
TAIR:At5g14510 eggNOG:NOG303012 HOGENOM:HOG000237435
InParanoid:Q9LY78 OMA:CKEHAVG PhylomeDB:Q9LY78
ProtClustDB:CLSN2687225 Genevestigator:Q9LY78 Uniprot:Q9LY78
Length = 327
Score = 167 (63.8 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 67/302 (22%), Positives = 144/302 (47%)
Query: 105 KIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKN 164
K ++ +AE +I L+SM+ ++ A+ AL+ LA G+ NK +V++G + L +
Sbjct: 30 KQRQKLAEREIISPLLSMLQSQDCITTEVALSALLSLAFGSERNKVRIVKSGAVPTLLEI 89
Query: 165 VDAVDESTRHEFGEXXXXXXXXANTH-IPLSSSEILPFLVGILESGS-SVETKELCIGAL 222
+ + + E N + + ++S+ ++ LVG++ +++ K I L
Sbjct: 90 LQSETKMVVLELAMAFLLILSSCNKNKVKMASTRLVQLLVGLIGLDRLTIQAKVDGIATL 149
Query: 223 YNLSAVLDNARPMVSNGVVHTLLKL---CSMKERLSEKSLATLGNLVVTSTGKKAMEDSP 279
NLS + ++++G + LL++ C L++K++A L N++ S +++
Sbjct: 150 QNLSTLHQIVPLVIASGAPYALLQVINFCDKSSELADKAVALLENII--SHSPESVSSIG 207
Query: 280 LVPESLIEILTWEEKPKCQELSAYILMILAHQSSE-QRDKMAKSGIVHVSLQLALLGSPL 338
L+E + E +C+E + IL+ + + E R + + G++ LQ+++ G+
Sbjct: 208 GAIGVLVEAIE-EGSAQCKEHAVGILLGICNNDRETNRGMILREGVMPGLLQVSVDGTRR 266
Query: 339 AQRRASKLLQWFKDERQAKMGPHSGPQTRRVSIGSPVSPREAQEGKKM---MKNLVQQSL 395
A+ A +LL +D G + ++ I + QEG+++ M LV++ +
Sbjct: 267 AKEMARELLLLLRD----CSGYVIKNKQSKIEIVEQIMREIDQEGERIPGTMLKLVEEMI 322
Query: 396 HK 397
K
Sbjct: 323 SK 324
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 168 (64.2 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 75/327 (22%), Positives = 137/327 (41%)
Query: 33 PNHNHEKSRTLKNINCQEEKQVIIEEKNHEQSDIEEDDCVLLQKSVKRLHFGSWXXXXXX 92
P N E S N+N + E H+ D K V+ L GS
Sbjct: 436 PKKNLESSN---NVNHEHSAAKTYECSVHDLDDSGTMTTSHTIKLVEDLKSGSNKVKTAA 492
Query: 93 XXXXXXXXXXDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIM 152
++ + + G I L+S++ +E + A+ AL+ L+ NKA++
Sbjct: 493 AAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVTALLNLSISEL-NKAMI 551
Query: 153 VEAGILTKLPKNVDAV-DESTRHEFGEXXXXXXXXANTHIPLSSSEILPFLVGILESGSS 211
VE G + L ++ D + + N S+ + LV +L G+
Sbjct: 552 VEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTF 611
Query: 212 VETKELCIGALYNLSAVLDNARPMVSNGVVHTLLKLCSMKERLSEKSLATLGNLVVTSTG 271
K+ AL+NLS DN +V V L++L + +K++A L NL G
Sbjct: 612 RGKKDAA-SALFNLSITHDNKARIVQAKAVKYLVELLDPDLEMVDKAVALLANLSAVGEG 670
Query: 272 KKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQL 331
++A+ +P L+E + + + +E +A +L+ L S + + + G + + L
Sbjct: 671 RQAIVREGGIP-LLVETVDLGSQ-RGKENAASVLLQLCLNSPKFCTLVLQEGAIPPLVAL 728
Query: 332 ALLGSPLAQRRASKLLQWFKDERQAKM 358
+ G+ A+ +A +LL F+++R A+M
Sbjct: 729 SQSGTQRAKEKAQQLLSHFRNQRDARM 755
>TAIR|locus:2096687 [details] [associations]
symbol:AT3G01400 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AC010870 ProtClustDB:CLSN2686276 IPI:IPI00535994
RefSeq:NP_566136.1 UniGene:At.20281 ProteinModelPortal:Q9SGH8
SMR:Q9SGH8 PRIDE:Q9SGH8 EnsemblPlants:AT3G01400.1 GeneID:821320
KEGG:ath:AT3G01400 TAIR:At3g01400 InParanoid:Q9SGH8 OMA:VAELECP
PhylomeDB:Q9SGH8 Genevestigator:Q9SGH8 Uniprot:Q9SGH8
Length = 355
Score = 160 (61.4 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 54/251 (21%), Positives = 116/251 (46%)
Query: 110 MAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAVD 169
+A+ G I+ L+S++S+ + + + A++ L+ NK + +G + L + +
Sbjct: 101 IAKAGAIKPLISLISSSDLQLQEYGVTAILNLSLCD-ENKESIASSGAIKPLVRALKMGT 159
Query: 170 ESTRHEFGEXXXXXXXXANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVL 229
+ + + + S +P LV +LE+G K+ ALY+L +
Sbjct: 160 PTAKENAACALLRLSQIEENKVAIGRSGAIPLLVNLLETGGFRAKKDAST-ALYSLCSAK 218
Query: 230 DNARPMVSNGVVHTLLKLCS-MKERLSEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEI 288
+N V +G++ L++L + + +KS + L+ K A+ + VP L+EI
Sbjct: 219 ENKIRAVQSGIMKPLVELMADFGSNMVDKSAFVMSLLMSVPESKPAIVEEGGVPV-LVEI 277
Query: 289 LTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQ 348
+ + + +E++ IL+ L +S R +A+ G + + L+ G+ A+++A L++
Sbjct: 278 VEVGTQRQ-KEMAVSILLQLCEESVVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIE 336
Query: 349 WFKDERQAKMG 359
+ R G
Sbjct: 337 LLRQPRSISNG 347
>TAIR|locus:2178818 [details] [associations]
symbol:AT5G58680 "AT5G58680" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009693 "ethylene
biosynthetic process" evidence=RCA] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002688 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AY084344 EMBL:DQ447090 IPI:IPI00540553 RefSeq:NP_200676.1
UniGene:At.29268 ProteinModelPortal:Q8LGC7 SMR:Q8LGC7
EnsemblPlants:AT5G58680.1 GeneID:835982 KEGG:ath:AT5G58680
TAIR:At5g58680 HOGENOM:HOG000084464 InParanoid:Q8LGC7 OMA:LCSTNEN
PhylomeDB:Q8LGC7 ProtClustDB:CLSN2686276 Genevestigator:Q8LGC7
Uniprot:Q8LGC7
Length = 357
Score = 157 (60.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 61/249 (24%), Positives = 117/249 (46%)
Query: 110 MAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAVD 169
+A+ G I+ LVS++S+ + + + A++ L+ NK ++V +G + L +
Sbjct: 99 LAKAGAIKPLVSLISSSDLQLQEYGVTAVLNLSLCD-ENKEMIVSSGAVKPLVNALRLGT 157
Query: 170 ESTRHEFGEXXXXXXXXANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVL 229
+T+ I + S +P LV +LE+G K+ ALY+L +
Sbjct: 158 PTTKENAACALLRLSQVEENKITIGRSGAIPLLVNLLENGGFRAKKDAST-ALYSLCSTN 216
Query: 230 DNARPMVSNGVVHTLLKLC-SMKERLSEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEI 288
+N V +G++ L++L + + +KS + L+ K A+ + VP L+EI
Sbjct: 217 ENKTRAVESGIMKPLVELMIDFESDMVDKSAFVMNLLMSAPESKPAVVEEGGVPV-LVEI 275
Query: 289 LTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPL--AQRRASKL 346
+ + + +E+S IL+ L +S R +A+ G V + L+ GS A+ +A L
Sbjct: 276 VEAGTQRQ-KEISVSILLQLCEESVVYRTMVAREGAVPPLVALSQ-GSASRGAKVKAEAL 333
Query: 347 LQWFKDERQ 355
++ + RQ
Sbjct: 334 IELLRQPRQ 342
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 161 (61.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 75/337 (22%), Positives = 143/337 (42%)
Query: 24 KSARRRQNEPNH-NHEKSRTLKNINCQ--EEKQVIIEEKN-HEQSDIEEDDCVLLQKSVK 79
K+ + + E +H + + LKN+ Q E+ I EK S E+ D V L V+
Sbjct: 329 KTCPKTRQELDHLSLAPNFALKNLIMQWCEKNNFKIPEKEVSPDSQNEQKDEVSLL--VE 386
Query: 80 RLHFGSWXXXXXXXXXXXXXXXXDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALI 139
L + + + L+A G I +LV ++S G + A+ L+
Sbjct: 387 ALSSSQLEEQRRSVKQMRLLARENPENRVLIANAGAIPLLVQLLSYPDSGIQENAVTTLL 446
Query: 140 QLANGTYTNKAIMVEAGILTKLPKNVDAVDESTRHEFGEXXXXXXXXANTHIPLSSSEIL 199
L+ NK ++ G + + + ++ + R + + S +
Sbjct: 447 NLSIDE-VNKKLISNEGAIPNIIEILENGNREARENSAAALFSLSMLDENKVTIGLSNGI 505
Query: 200 PFLVGILESGSSVETKELCIGALYNLSAVLDNARPMVSNGVVHTLLKLCSMKER-LSEKS 258
P LV +L+ G+ + K+ + AL+NLS N + G+V LL L K + +++
Sbjct: 506 PPLVDLLQHGT-LRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEA 564
Query: 259 LATLGNLVVTSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMILAHQSSEQRDK 318
L+ L L G++A+ + E+L+E + + PK +E + +L+ L +S
Sbjct: 565 LSILLLLASHPEGRQAIGQLSFI-ETLVEFIR-QGTPKNKECATSVLLELGSNNSSFILA 622
Query: 319 MAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKDERQ 355
+ G+ +++ G+ AQR+A+ L+Q Q
Sbjct: 623 ALQFGVYEYLVEITTSGTNRAQRKANALIQLISKSEQ 659
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 157 (60.3 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 60/243 (24%), Positives = 115/243 (47%)
Query: 110 MAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAVD 169
+AE G I +LV ++S+ + ++ AL+ L+ NK +V+AG +T + + +
Sbjct: 383 IAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSINE-GNKGAIVDAGAITDIVEVLKNGS 441
Query: 170 ESTRHEFGEXXXXXXXXANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVL 229
R + + ++ + L+ +LE G+ K+ A++NL
Sbjct: 442 MEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEEGTRRGKKDAAT-AIFNLCIYQ 500
Query: 230 DNARPMVSNGVVHTLLKLCSMKER---LSEKSLATLGNLVVTSTGKKAMEDSPLVPESLI 286
N V G+V L +L +K+ + +++LA L L GK A+ ++ +P L+
Sbjct: 501 GNKSRAVKGGIVDPLTRL--LKDAGGGMVDEALAILAILSTNQEGKTAIAEAESIPV-LV 557
Query: 287 EILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSL-QLALLGSPLAQRRASK 345
EI+ P+ +E +A IL L + E+ + + G V+L +L G+ A+R+A+
Sbjct: 558 EIIR-TGSPRNRENAAAILWYLCIGNIERLNVAREVG-ADVALKELTENGTDRAKRKAAS 615
Query: 346 LLQ 348
LL+
Sbjct: 616 LLE 618
Score = 128 (50.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 58/236 (24%), Positives = 105/236 (44%)
Query: 119 LVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAVDESTR-HEFG 177
L+ ++ ++RAA L LA N+ + EAG + L + + + D T+ H
Sbjct: 350 LLEKLANGTTEQQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVT 409
Query: 178 EXXXXXXXXANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVLDNARPMVS 237
N + + I +V +L++GS +E +E L++LS + +N + +
Sbjct: 410 ALLNLSINEGNKGAIVDAGAITD-IVEVLKNGS-MEARENAAATLFSLSVIDENKVAIGA 467
Query: 238 NGVVHTLLKLCSMKERLSEKSLAT-LGNLVVTSTGKKAMEDSPLVPESLIEILTWEEKPK 296
G + L+ L R +K AT + NL + G K S V +++ LT K
Sbjct: 468 AGAIQALISLLEEGTRRGKKDAATAIFNLCIYQ-GNK----SRAVKGGIVDPLTRLLKDA 522
Query: 297 CQELSAYILMILAHQSSEQRDK--MAKSGIVHVSLQLALLGSPLAQRRASKLLQWF 350
+ L ILA S+ Q K +A++ + V +++ GSP + A+ +L W+
Sbjct: 523 GGGMVDEALAILAILSTNQEGKTAIAEAESIPVLVEIIRTGSPRNRENAAAIL-WY 577
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 155 (59.6 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 59/240 (24%), Positives = 108/240 (45%)
Query: 110 MAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAVD 169
+AE G I +LV ++ST + ++ AL+ L+ NK +V AG + + + +
Sbjct: 390 IAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSI-CENNKGAIVSAGAIPGIVQVLKKGS 448
Query: 170 ESTRHEFGEXXXXXXXXANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVL 229
R + + + +P LV +L G+ K+ AL+NL
Sbjct: 449 MEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQRGKKDAAT-ALFNLCIYQ 507
Query: 230 DNARPMVSNGVVHTLLKLCSMK-ERLSEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEI 288
N + GV+ TL +L + + +++LA L L GK + S VP SL+E
Sbjct: 508 GNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAILSSHPEGKAIIGSSDAVP-SLVEF 566
Query: 289 LTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQ 348
+ P+ +E +A +L+ L + + K G++ + LA G+ +R+A++LL+
Sbjct: 567 IR-TGSPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDLAGNGTDRGKRKAAQLLE 625
>TAIR|locus:2130699 [details] [associations]
symbol:AT4G16490 "AT4G16490" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0006816
"calcium ion transport" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 EMBL:CP002687 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 IPI:IPI00531461
RefSeq:NP_567501.4 UniGene:At.23147 UniGene:At.75353
ProteinModelPortal:F4JMH0 SMR:F4JMH0 EnsemblPlants:AT4G16490.1
GeneID:827347 KEGG:ath:AT4G16490 OMA:DLQPTVK Uniprot:F4JMH0
Length = 472
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 57/250 (22%), Positives = 112/250 (44%)
Query: 109 LMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAV 168
L+ E G IQ L+ ++ + A+ AL+ L+ NKA++ G + L +
Sbjct: 220 LIGESGAIQALIPLLRCNDPWTQEHAVTALLNLSLHDQ-NKAVIAAGGAIKSLVWVLKTG 278
Query: 169 DESTRHEFGEXXXXXXXXANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAV 228
E+++ + + +P LV +L +GS K+ + LY L +
Sbjct: 279 TETSKQNAACALLSLALLEENKGSIGACGAIPPLVSLLLNGSCRGKKD-ALTTLYKLCTL 337
Query: 229 LDNARPMVSNGVVHTLLKLCSMKER-LSEKSLATLGNLVVTSTGKKAMEDSPLVPESLIE 287
N V+ G V L+ L + + ++EK++ L +L GK+A+ + + +L+E
Sbjct: 338 QQNKERAVTAGAVKPLVDLVAEEGTGMAEKAMVVLSSLAAIDDGKEAIVEEGGIA-ALVE 396
Query: 288 ILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPL--AQRRASK 345
+ + K +E + L+ L S R + + G + + L+ GS A+R+A +
Sbjct: 397 AIE-DGSVKGKEFAILTLLQLCSDSVRNRGLLVREGAIPPLVGLSQSGSVSVRAKRKAER 455
Query: 346 LLQWFKDERQ 355
LL + ++ R+
Sbjct: 456 LLGYLREPRK 465
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 150 (57.9 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 64/253 (25%), Positives = 118/253 (46%)
Query: 109 LMAELGVIQMLVSMV-STEVIGRRRA-AIKALIQLANGTYTNKAIMVEAGILTKLPKNVD 166
++A I LVS++ ST+ R +A A+ L+ L+ NK+++ E+G + L +
Sbjct: 458 VIARCEAIPSLVSLLYSTDE--RIQADAVTCLLNLSIND-NNKSLIAESGAIVPLIHVLK 514
Query: 167 A--VDESTRHEFGEXXXXXXXXA-NTHIPLSSSEILPFLVGILESGSSVETKELCIGALY 223
++E+ + T I + I P LV +L SGS K+ AL+
Sbjct: 515 TGYLEEAKANSAATLFSLSVIEEYKTEIG-EAGAIEP-LVDLLGSGSLSGKKDAAT-ALF 571
Query: 224 NLSAVLDNARPMVSNGVVHTLLKLCSMKERLSEKSLATLGNLVVTSTGKKAMEDSPLVPE 283
NLS +N ++ G V L++L + EK++ L NL GK A+ + +P
Sbjct: 572 NLSIHHENKTKVIEAGAVRYLVELMDPAFGMVEKAVVVLANLATVREGKIAIGEEGGIPV 631
Query: 284 SLIEILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRA 343
L+E++ + +A +L + H S + + + + G++ + L G+ + +A
Sbjct: 632 -LVEVVELGSARGKENATAALLQLCTH-SPKFCNNVIREGVIPPLVALTKSGTARGKEKA 689
Query: 344 SKLLQWFKDERQA 356
LL++FK RQ+
Sbjct: 690 QNLLKYFKAHRQS 702
>TAIR|locus:2146183 [details] [associations]
symbol:AT5G18320 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
IPI:IPI00534776 RefSeq:NP_197333.2 UniGene:At.54897
ProteinModelPortal:Q3E9F7 SMR:Q3E9F7 PaxDb:Q3E9F7 PRIDE:Q3E9F7
EnsemblPlants:AT5G18320.1 GeneID:831950 KEGG:ath:AT5G18320
TAIR:At5g18320 eggNOG:NOG312656 InParanoid:Q3E9F7 OMA:NTIMIEP
PhylomeDB:Q3E9F7 ProtClustDB:CLSN2686550 Genevestigator:Q3E9F7
Uniprot:Q3E9F7
Length = 458
Score = 144 (55.7 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 61/254 (24%), Positives = 114/254 (44%)
Query: 106 IKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVE-AGILTKLPKN 164
I +L++ L + V S E+ + + AL L+ +NK ++ E ++ L K+
Sbjct: 206 ITRLLSPLSTLDEAVDS-SLEL---QENIVTALFNLSI-LESNKTVIAENCLVIPLLTKS 260
Query: 165 VDAVDESTRHEFGEXXXXXXXXANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYN 224
+ + TR + I + +SE + L+ ++E G + TKE ++N
Sbjct: 261 LKQGTDETRRNAAATLSSLSAIDSNKIIIGNSEAVKALIDLIEEGDLLATKE-ATSTVFN 319
Query: 225 LSAVLDNARPMVSNGVVHTLLKLCSMKERLSEKSLATLGNLVVTSTGKKAMEDSPLVPES 284
L VL+N +VS G++H K + E L +L L + ST +A+E+ +
Sbjct: 320 LCIVLENKGKVVSAGLIHAATKKIKAGSNVDE--LLSL--LALISTHNRAVEEMDKLG-F 374
Query: 285 LIEILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIV------HVSL-QLALLGSP 337
+ ++ + KP ++I+ + RD+ ++ +V H + +LA GS
Sbjct: 375 IYDLFSILRKPSSLLTGENAVVIVFNMYDRNRDR-SRLKVVGEEENQHGTFTKLAKQGSV 433
Query: 338 LAQRRASKLLQWFK 351
A R+A +LQW K
Sbjct: 434 RAARKAQGILQWIK 447
>TAIR|locus:2198235 [details] [associations]
symbol:AT1G01830 "AT1G01830" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176
SMART:SM00185 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
eggNOG:NOG268795 HOGENOM:HOG000239669 ProtClustDB:CLSN2683369
EMBL:AY059739 EMBL:AY091273 IPI:IPI00535901 RefSeq:NP_001077443.1
RefSeq:NP_001077444.1 RefSeq:NP_563637.1 UniGene:At.26641
ProteinModelPortal:Q93YW3 SMR:Q93YW3 EnsemblPlants:AT1G01830.1
EnsemblPlants:AT1G01830.2 EnsemblPlants:AT1G01830.3 GeneID:839264
KEGG:ath:AT1G01830 TAIR:At1g01830 InParanoid:Q93YW3 OMA:GHLESKH
PhylomeDB:Q93YW3 ArrayExpress:Q93YW3 Genevestigator:Q93YW3
Uniprot:Q93YW3
Length = 574
Score = 137 (53.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 51/157 (32%), Positives = 78/157 (49%)
Query: 193 LSSSEILPFLVGILESGSSVETKELCIGALYNLSAVLDNARPMVSNGVVHTLLKLCSMKE 252
L S +LP LV ++ESGS +ETKE A+ LS +NAR + +G + L+ LC +
Sbjct: 247 LISEGVLPPLVRLIESGS-LETKEKAAIAIQRLSMTEENAREIAGHGGITPLIDLCKTGD 305
Query: 253 RLSEK-SLATLGNLVVTSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMILAHQ 311
+S+ S A L N+ S ++ + + ++ S I++L +E A L L
Sbjct: 306 SVSQAASAAALKNMSAVSELRQLLAEEGIIRVS-IDLLNHGILLGSREHMAECLQNLTAA 364
Query: 312 SSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQ 348
S R+ + G V SL LA L PL Q+ A L+
Sbjct: 365 SDALREAIVSEGGVP-SL-LAYLDGPLPQQPAVTALR 399
Score = 50 (22.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 105 KIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYT 147
K L + LG +Q MV +IGR A + AL+QL T T
Sbjct: 184 KHNALESLLGAMQEDEKMVLMPLIGR--ANVAALVQLLTATST 224
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 130 (50.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 56/242 (23%), Positives = 108/242 (44%)
Query: 110 MAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAVD 169
+AE G I +L+S++S+ + + A+ AL+ L+ NKA ++ +G + + +
Sbjct: 405 IAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHE-DNKASIISSGAVPSIVHVLKNGS 463
Query: 170 ESTRHEFGEXXXXXXXXANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVL 229
R + + +P LV +L GS K+ AL+NL
Sbjct: 464 MEARENAAATLFSLSVIDEYKVTIGGMGAIPALVVLLGEGSQRGKKDAA-AALFNLCIYQ 522
Query: 230 DNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEI 288
N + G+V ++ L + L ++++A L L GK A+ + VP L+E+
Sbjct: 523 GNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSILSSHPEGKAAIGAAEPVPV-LVEM 581
Query: 289 LTWEEKPKCQELSAYILMILAHQSSE--QRDKMAKSGIVHVSLQLALLGSPLAQRRASKL 346
+ P+ +E +A +++ L + + GI+ +LAL G+ +R+A +L
Sbjct: 582 IG-SGTPRNRENAAAVMLHLCSGEHHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQL 640
Query: 347 LQ 348
L+
Sbjct: 641 LE 642
Score = 123 (48.4 bits), Expect = 0.00026, P = 0.00026
Identities = 60/247 (24%), Positives = 105/247 (42%)
Query: 155 AGILTKLPKNVDAVDESTRHEFGEXXXXXXXXANTHIPLSSSEILPFLVGILESGSSVET 214
A I L K E R E AN I ++ + +P L+ +L S S + T
Sbjct: 367 ANIDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSS-SDLRT 425
Query: 215 KELCIGALYNLSAVLDNARPMVSNGVVHTL---LKLCSMKERLSEKSLATLGNLVVTSTG 271
+E + AL NLS DN ++S+G V ++ LK SM+ R E + ATL +L V
Sbjct: 426 QEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEAR--ENAAATLFSLSVIDEY 483
Query: 272 KKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQL 331
K + +P ++ + ++ K ++ +A + + +Q ++ R ++G+V + + L
Sbjct: 484 KVTIGGMGAIPALVVLLGEGSQRGK-KDAAAALFNLCIYQGNKGR--AIRAGLVPLIMGL 540
Query: 332 ALLGSPLAQRRASKLLQWFKD--ERQAKMGPHSGPQTRRVSIGSPVSPREAQEGKKMMKN 389
+ A +L E +A +G IGS +PR + +M +
Sbjct: 541 VTNPTGALMDEAMAILSILSSHPEGKAAIGAAEPVPVLVEMIGSG-TPRNRENAAAVMLH 599
Query: 390 LVQQSLH 396
L H
Sbjct: 600 LCSGEHH 606
>TAIR|locus:2043709 [details] [associations]
symbol:AT2G45720 "AT2G45720" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002685 GenomeReviews:CT485783_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC003680 EMBL:AC004665
EMBL:BT015356 EMBL:BT015888 IPI:IPI00524023 PIR:T00885
RefSeq:NP_001031543.1 RefSeq:NP_182096.1 UniGene:At.28663
UniGene:At.36601 ProteinModelPortal:O64651 SMR:O64651 PaxDb:O64651
EnsemblPlants:AT2G45720.1 EnsemblPlants:AT2G45720.2 GeneID:819180
KEGG:ath:AT2G45720 TAIR:At2g45720 eggNOG:NOG268795
HOGENOM:HOG000239669 InParanoid:O64651 OMA:RSIVGHG PhylomeDB:O64651
ProtClustDB:CLSN2683369 ArrayExpress:O64651 Genevestigator:O64651
Uniprot:O64651
Length = 553
Score = 122 (48.0 bits), Expect = 0.00024, P = 0.00024
Identities = 57/218 (26%), Positives = 97/218 (44%)
Query: 128 IGRRRAAIKALIQLANGTYTN-KAIMVEAGI--LTKLPKNVDAVDESTRHEFGEXXXXXX 184
IG + KAL QL + KA++ G + L + + A S R
Sbjct: 160 IGHLESKRKALEQLVEVMKEDEKAVITALGRTNVASLVQLLTATSPSVRENAVTVICSLA 219
Query: 185 XXANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVLDNARPMVSNGVVHTL 244
L S LP L+ +LESGS V KE + +L +S + +R +V +G V L
Sbjct: 220 ESGGCENWLISENALPSLIRLLESGSIV-AKEKAVISLQRMSISSETSRSIVGHGGVGPL 278
Query: 245 LKLCSMKERLSEKSLA-TLGNLVVTSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSAY 303
+++C + +S+ + A TL N+ ++ + + +V + +I IL +E +A
Sbjct: 279 IEICKTGDSVSQSASACTLKNISAVPEVRQNLAEEGIV-KVMINILNCGILLGSKEYAAE 337
Query: 304 ILMILAHQSSE-QRDKMAKSGIVHVSLQLALLGSPLAQ 340
L L + +R ++++GI + LA L PL Q
Sbjct: 338 CLQNLTSSNETLRRSVISENGIQTL---LAYLDGPLPQ 372
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.128 0.351 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 429 405 0.0010 117 3 11 23 0.42 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 25
No. of states in DFA: 611 (65 KB)
Total size of DFA: 226 KB (2125 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.92u 0.13s 36.05t Elapsed: 00:00:02
Total cpu time: 35.93u 0.13s 36.06t Elapsed: 00:00:02
Start: Fri May 10 06:17:05 2013 End: Fri May 10 06:17:07 2013