Query 014196
Match_columns 429
No_of_seqs 384 out of 1743
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 07:12:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014196.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014196hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nmw_A APC variant protein; AR 100.0 2.6E-34 9E-39 283.5 19.5 265 86-354 46-336 (354)
2 1xm9_A Plakophilin 1; armadill 100.0 4E-34 1.4E-38 292.6 19.8 280 74-355 4-363 (457)
3 3nmz_A APC variant protein; pr 100.0 1.9E-33 6.6E-38 285.6 20.0 260 90-353 166-451 (458)
4 3l6x_A Catenin delta-1; cateni 100.0 6.2E-33 2.1E-37 288.1 21.0 284 71-355 47-387 (584)
5 3ul1_B Importin subunit alpha- 100.0 3.6E-31 1.2E-35 274.3 27.0 318 69-394 97-432 (510)
6 3now_A UNC-45 protein, SD10334 100.0 3.2E-31 1.1E-35 283.9 26.8 317 70-393 419-783 (810)
7 3tpo_A Importin subunit alpha- 100.0 9.3E-31 3.2E-35 272.4 28.8 318 69-394 116-451 (529)
8 1xm9_A Plakophilin 1; armadill 100.0 6.1E-31 2.1E-35 269.0 24.6 282 69-355 41-452 (457)
9 3nmz_A APC variant protein; pr 100.0 3.7E-31 1.3E-35 268.8 16.7 316 70-392 68-450 (458)
10 3ul1_B Importin subunit alpha- 100.0 1.9E-30 6.5E-35 268.9 22.4 319 74-395 59-390 (510)
11 3nmw_A APC variant protein; AR 100.0 8E-31 2.7E-35 258.7 16.0 243 70-314 71-338 (354)
12 3l6x_A Catenin delta-1; cateni 100.0 3.3E-29 1.1E-33 260.2 23.9 278 70-352 88-476 (584)
13 3tpo_A Importin subunit alpha- 100.0 6.7E-29 2.3E-33 258.4 25.1 319 73-394 77-408 (529)
14 4b8j_A Importin subunit alpha- 100.0 4.1E-28 1.4E-32 251.8 28.6 319 71-395 116-446 (528)
15 4b8j_A Importin subunit alpha- 100.0 2.3E-27 7.8E-32 246.2 29.1 317 72-393 74-401 (528)
16 3now_A UNC-45 protein, SD10334 100.0 2.3E-28 8E-33 261.8 20.7 280 71-355 494-785 (810)
17 1wa5_B Importin alpha subunit; 100.0 4.7E-27 1.6E-31 244.1 28.0 321 71-395 129-460 (530)
18 2jdq_A Importin alpha-1 subuni 100.0 1.8E-26 6.3E-31 233.4 30.4 319 72-395 64-393 (450)
19 4hxt_A De novo protein OR329; 100.0 2.3E-27 8E-32 221.0 21.1 238 114-354 2-243 (252)
20 4db8_A Armadillo-repeat protei 100.0 2.3E-27 7.7E-32 222.1 18.6 235 73-310 13-251 (252)
21 1wa5_B Importin alpha subunit; 100.0 2.4E-26 8.3E-31 238.8 28.1 316 73-393 88-413 (530)
22 4hxt_A De novo protein OR329; 99.9 9.6E-27 3.3E-31 216.8 21.3 236 73-311 3-242 (252)
23 4db8_A Armadillo-repeat protei 99.9 8.1E-27 2.8E-31 218.3 17.7 236 114-352 12-251 (252)
24 1jdh_A Beta-catenin; beta-cate 99.9 3.5E-26 1.2E-30 236.3 23.8 277 71-352 58-339 (529)
25 3tt9_A Plakophilin-2; cell adh 99.9 5.1E-27 1.8E-31 217.2 14.5 195 73-268 9-230 (233)
26 2z6h_A Catenin beta-1, beta-ca 99.9 8.9E-26 3E-30 240.2 24.1 277 71-352 55-336 (644)
27 2jdq_A Importin alpha-1 subuni 99.9 1.2E-24 4E-29 220.1 27.5 315 73-393 21-348 (450)
28 1jdh_A Beta-catenin; beta-cate 99.9 2.4E-25 8.1E-30 230.0 22.5 279 71-353 100-386 (529)
29 3tt9_A Plakophilin-2; cell adh 99.9 4.2E-26 1.4E-30 211.1 12.2 195 115-311 9-230 (233)
30 2z6h_A Catenin beta-1, beta-ca 99.9 1.4E-24 4.9E-29 230.9 23.6 280 71-354 97-384 (644)
31 2z6g_A B-catenin; FULL-length, 99.9 2.5E-24 8.5E-29 233.7 24.7 277 71-352 191-472 (780)
32 2z6g_A B-catenin; FULL-length, 99.9 1.3E-23 4.5E-28 228.0 22.1 279 71-353 233-519 (780)
33 4db6_A Armadillo repeat protei 99.9 9.7E-24 3.3E-28 192.0 17.8 195 72-267 12-209 (210)
34 3opb_A SWI5-dependent HO expre 99.9 5.5E-23 1.9E-27 216.8 21.9 280 70-352 374-728 (778)
35 4db6_A Armadillo repeat protei 99.9 8.5E-23 2.9E-27 185.7 16.5 196 112-310 10-209 (210)
36 1xqr_A HSPBP1 protein; armadil 99.9 1.6E-21 5.6E-26 187.4 17.0 199 68-268 24-239 (296)
37 3opb_A SWI5-dependent HO expre 99.8 8E-20 2.7E-24 192.8 19.7 314 71-392 333-728 (778)
38 1xqr_A HSPBP1 protein; armadil 99.8 4.7E-19 1.6E-23 170.2 18.7 222 128-352 54-287 (296)
39 3grl_A General vesicular trans 99.6 1.7E-13 5.8E-18 141.4 22.5 276 69-351 18-341 (651)
40 3grl_A General vesicular trans 99.4 9.6E-12 3.3E-16 128.4 22.7 286 65-351 53-393 (651)
41 1oyz_A Hypothetical protein YI 99.4 2.4E-11 8.3E-16 114.9 18.3 225 73-352 24-250 (280)
42 3ltm_A Alpha-REP4; protein eng 99.3 1.2E-10 4.3E-15 105.2 16.8 186 71-311 18-204 (211)
43 3ltm_A Alpha-REP4; protein eng 99.3 2.1E-10 7.1E-15 103.7 18.2 187 113-354 18-205 (211)
44 3ltj_A Alpharep-4; protein eng 99.3 3.1E-10 1.1E-14 101.8 18.4 185 70-309 12-197 (201)
45 3ltj_A Alpharep-4; protein eng 99.2 3.7E-10 1.3E-14 101.2 17.1 185 113-352 13-198 (201)
46 4fdd_A Transportin-1; heat rep 99.2 3.7E-10 1.3E-14 123.4 17.7 310 72-394 128-473 (852)
47 1oyz_A Hypothetical protein YI 99.2 8.8E-10 3E-14 104.1 17.4 201 110-352 19-221 (280)
48 2vgl_B AP-2 complex subunit be 99.0 3.3E-08 1.1E-12 103.7 23.2 265 71-352 120-457 (591)
49 4gmo_A Putative uncharacterize 99.0 1.1E-09 3.7E-14 117.0 11.7 194 72-266 34-257 (684)
50 4fdd_A Transportin-1; heat rep 99.0 8.8E-10 3E-14 120.4 9.9 270 72-352 174-471 (852)
51 1ibr_B P95, importin beta-1 su 99.0 7.3E-09 2.5E-13 104.0 15.7 273 72-353 128-438 (462)
52 4gmo_A Putative uncharacterize 98.9 1.3E-09 4.5E-14 116.3 9.6 193 115-309 35-257 (684)
53 2vgl_B AP-2 complex subunit be 98.9 1.2E-07 4.1E-12 99.4 22.0 255 74-352 51-311 (591)
54 1b3u_A Protein (protein phosph 98.9 2.9E-08 9.8E-13 102.9 16.7 264 72-352 164-431 (588)
55 1b3u_A Protein (protein phosph 98.9 2.8E-08 9.5E-13 103.0 16.5 301 73-390 282-585 (588)
56 1w63_A Adapter-related protein 98.6 2.6E-06 9E-11 89.7 21.7 276 38-352 81-379 (618)
57 2kr4_A Ubiquitin conjugation f 98.6 1.4E-08 4.8E-13 78.3 2.7 53 1-54 24-80 (85)
58 1wgm_A Ubiquitin conjugation f 98.6 1.7E-08 5.7E-13 80.0 2.6 54 1-54 32-89 (98)
59 3m62_A Ubiquitin conjugation f 98.6 1.7E-08 5.7E-13 108.2 2.4 54 1-54 901-958 (968)
60 1qgr_A Protein (importin beta 98.5 7.3E-06 2.5E-10 89.0 22.8 310 72-394 128-481 (876)
61 1qgr_A Protein (importin beta 98.5 1.5E-06 5.1E-11 94.4 17.3 272 73-353 173-480 (876)
62 2kre_A Ubiquitin conjugation f 98.5 2.5E-08 8.7E-13 79.3 2.1 53 1-54 39-95 (100)
63 1w63_A Adapter-related protein 98.5 2.3E-06 7.8E-11 90.1 17.2 261 71-352 141-490 (618)
64 3b2a_A TON_1937, putative unch 98.5 4.4E-06 1.5E-10 75.3 16.1 208 42-269 11-220 (265)
65 1ibr_B P95, importin beta-1 su 98.5 2.1E-06 7.2E-11 85.9 15.1 259 74-353 3-289 (462)
66 2f42_A STIP1 homology and U-bo 98.4 7E-08 2.4E-12 84.6 3.0 53 1-54 116-173 (179)
67 2bpt_A Importin beta-1 subunit 98.4 6.4E-06 2.2E-10 89.3 17.9 307 73-394 370-713 (861)
68 1u6g_C TIP120 protein, CAND1; 98.4 6E-07 2E-11 101.8 9.8 268 72-352 6-284 (1230)
69 2bpt_A Importin beta-1 subunit 98.4 3.5E-05 1.2E-09 83.4 23.3 272 71-353 133-441 (861)
70 2qk2_A LP04448P; mini spindles 98.2 4.8E-06 1.6E-10 76.7 10.4 180 76-267 19-205 (242)
71 2vgl_A Adaptor protein complex 98.2 0.00021 7.2E-09 75.1 23.2 279 39-352 86-398 (621)
72 2yu4_A E3 SUMO-protein ligase 98.1 6.9E-07 2.4E-11 70.1 2.2 54 1-54 17-83 (94)
73 1te4_A Conserved protein MTH18 98.1 2.3E-07 7.9E-12 77.3 -1.3 121 71-225 11-131 (131)
74 2qk2_A LP04448P; mini spindles 98.1 3.7E-05 1.3E-09 70.6 13.4 181 160-352 19-205 (242)
75 1te4_A Conserved protein MTH18 98.0 6.5E-07 2.2E-11 74.5 0.4 119 113-264 11-130 (131)
76 2bay_A PRE-mRNA splicing facto 98.0 6.1E-07 2.1E-11 64.3 0.0 43 1-43 13-59 (61)
77 2qk1_A Protein STU2; STU2P, XM 98.0 2E-05 6.8E-10 73.2 9.5 188 77-267 21-220 (249)
78 1u6g_C TIP120 protein, CAND1; 97.9 0.00021 7.2E-09 80.9 18.6 228 70-311 46-285 (1230)
79 1t1h_A Gspef-atpub14, armadill 97.9 4E-06 1.4E-10 63.1 2.5 53 2-55 19-76 (78)
80 2c2l_A CHIP, carboxy terminus 97.8 4.4E-06 1.5E-10 78.8 1.9 53 1-54 218-275 (281)
81 2vgl_A Adaptor protein complex 97.7 0.0024 8.3E-08 67.0 20.7 249 72-353 329-590 (621)
82 2qk1_A Protein STU2; STU2P, XM 97.7 0.00096 3.3E-08 61.7 15.3 185 162-352 22-220 (249)
83 4ady_A RPN2, 26S proteasome re 97.6 0.0045 1.5E-07 67.1 21.7 223 86-352 451-676 (963)
84 2iw3_A Elongation factor 3A; a 97.6 0.00064 2.2E-08 74.3 14.7 301 72-393 14-325 (986)
85 3dad_A FH1/FH2 domain-containi 97.6 0.0005 1.7E-08 65.6 11.7 152 72-225 118-284 (339)
86 2db0_A 253AA long hypothetical 97.5 0.028 9.7E-07 48.9 20.9 214 70-310 30-246 (253)
87 1ho8_A Vacuolar ATP synthase s 97.5 0.00081 2.8E-08 67.3 12.1 231 119-351 172-475 (480)
88 3dad_A FH1/FH2 domain-containi 97.5 0.0013 4.4E-08 62.8 12.9 150 200-351 121-285 (339)
89 3tjz_B Coatomer subunit gamma; 97.4 0.004 1.4E-07 60.5 16.5 265 38-345 79-346 (355)
90 4ady_A RPN2, 26S proteasome re 97.4 0.0098 3.3E-07 64.5 20.7 234 74-352 394-641 (963)
91 2iw3_A Elongation factor 3A; a 97.4 0.0051 1.7E-07 67.3 17.9 264 72-354 54-326 (986)
92 3b2a_A TON_1937, putative unch 97.3 0.013 4.4E-07 52.9 16.1 218 115-351 34-260 (265)
93 2db0_A 253AA long hypothetical 97.2 0.052 1.8E-06 47.2 18.6 213 113-351 31-245 (253)
94 1ho8_A Vacuolar ATP synthase s 96.9 0.0043 1.5E-07 62.0 10.5 227 77-309 172-475 (480)
95 3tjz_B Coatomer subunit gamma; 96.7 0.041 1.4E-06 53.4 15.4 246 72-351 68-315 (355)
96 3htk_C E3 SUMO-protein ligase 96.5 0.00054 1.8E-08 63.0 0.5 53 1-53 191-251 (267)
97 4ffb_C Protein STU2; tubulin f 96.4 0.029 9.9E-07 52.2 12.1 184 77-267 14-212 (278)
98 3oc3_A Helicase MOT1, MOT1; re 96.1 0.06 2E-06 54.7 13.0 240 73-347 175-431 (800)
99 2of3_A ZYG-9; multifunctional 95.7 0.52 1.8E-05 43.6 16.9 196 76-289 50-257 (266)
100 1lrv_A LRV, leucine-rich repea 95.4 0.027 9.4E-07 51.6 6.7 31 12-46 38-69 (244)
101 2fv2_A RCD1 required for cell 95.0 1.3 4.4E-05 40.4 16.2 199 74-277 5-234 (268)
102 1lrv_A LRV, leucine-rich repea 94.8 0.046 1.6E-06 50.1 6.4 80 81-178 59-144 (244)
103 1wa5_C Importin alpha RE-expor 94.2 0.68 2.3E-05 50.8 15.3 253 88-352 377-670 (960)
104 3ztg_A E3 ubiquitin-protein li 93.4 0.053 1.8E-06 41.4 3.3 52 3-54 25-83 (92)
105 2fv2_A RCD1 required for cell 93.2 0.64 2.2E-05 42.4 10.5 98 254-352 72-174 (268)
106 3u0r_A Apoptosis inhibitor 5; 93.2 4 0.00014 40.7 16.9 183 73-276 30-217 (507)
107 3oc3_A Helicase MOT1, MOT1; re 92.0 0.32 1.1E-05 49.5 7.6 211 116-349 176-401 (800)
108 4ffb_C Protein STU2; tubulin f 91.8 2.7 9.3E-05 38.5 13.5 187 156-352 10-212 (278)
109 3ebb_A Phospholipase A2-activa 91.4 2.6 8.9E-05 39.6 12.9 163 73-238 104-274 (304)
110 1wa5_C Importin alpha RE-expor 91.3 1.3 4.4E-05 48.6 12.2 185 76-266 459-669 (960)
111 2y43_A E3 ubiquitin-protein li 91.2 0.089 3.1E-06 40.7 2.1 46 9-54 40-89 (99)
112 3ebb_A Phospholipase A2-activa 90.8 0.54 1.8E-05 44.4 7.5 131 213-349 163-303 (304)
113 1upk_A MO25 protein; transfera 90.6 2.4 8.3E-05 40.2 11.7 190 73-268 79-284 (341)
114 3fl2_A E3 ubiquitin-protein li 89.3 0.21 7E-06 40.4 2.8 45 9-53 69-119 (124)
115 3ldz_A STAM-1, signal transduc 89.2 4.4 0.00015 33.3 11.1 100 27-142 13-113 (140)
116 1x5b_A Signal transducing adap 88.8 1.9 6.5E-05 36.6 8.7 109 11-142 13-124 (163)
117 2f31_A Diaphanous protein homo 88.4 9.2 0.00032 34.2 13.6 121 108-231 38-184 (233)
118 1z6u_A NP95-like ring finger p 86.7 0.36 1.2E-05 40.5 2.8 44 9-52 95-144 (150)
119 3eg5_B Protein diaphanous homo 86.6 16 0.00054 35.4 15.0 202 38-250 39-275 (383)
120 1juq_A ADP-ribosylation factor 86.6 2.5 8.5E-05 36.2 8.2 109 17-144 14-129 (171)
121 3c2g_A SYS-1 protein; beta-cat 86.4 6.9 0.00024 37.4 11.5 110 137-249 265-377 (619)
122 3g2s_A C-terminal fragment of 86.1 10 0.00034 31.6 11.5 101 27-143 19-126 (149)
123 2f31_A Diaphanous protein homo 85.6 16 0.00055 32.6 13.6 126 213-339 69-215 (233)
124 2x1g_F Cadmus; transport prote 84.2 15 0.00051 40.0 15.0 212 126-352 476-722 (971)
125 2x19_B Importin-13; nuclear tr 83.6 15 0.00052 39.7 14.8 134 124-267 459-599 (963)
126 2ckl_A Polycomb group ring fin 83.0 0.5 1.7E-05 37.0 1.9 49 4-52 28-84 (108)
127 2x19_B Importin-13; nuclear tr 82.5 12 0.00041 40.6 13.4 155 82-248 459-621 (963)
128 1mhq_A ADP-ribosylation factor 82.3 6.2 0.00021 32.8 8.6 101 27-143 9-116 (148)
129 3zyq_A Hepatocyte growth facto 82.1 7.7 0.00026 34.7 9.7 108 12-142 7-117 (226)
130 2bnx_A Diaphanous protein homo 81.4 40 0.0014 32.5 15.5 135 113-250 46-213 (386)
131 1upk_A MO25 protein; transfera 80.9 38 0.0013 32.0 15.7 202 150-355 72-286 (341)
132 2of3_A ZYG-9; multifunctional 80.7 7.8 0.00027 35.6 9.4 102 71-184 131-235 (266)
133 3c2g_A SYS-1 protein; beta-cat 77.5 19 0.00064 34.5 10.8 129 222-352 266-403 (619)
134 3eg5_B Protein diaphanous homo 76.9 4.2 0.00015 39.5 6.7 118 233-352 104-246 (383)
135 2bnx_A Diaphanous protein homo 76.3 25 0.00087 34.0 12.1 126 213-339 73-219 (386)
136 2x1g_F Cadmus; transport prote 76.0 91 0.0031 33.6 18.7 171 169-352 477-663 (971)
137 3thg_A Ribulose bisphosphate c 75.4 2.2 7.5E-05 33.1 3.3 42 9-51 46-96 (107)
138 2ckl_B Ubiquitin ligase protei 73.9 1.3 4.4E-05 37.6 1.8 45 9-53 72-122 (165)
139 3u0r_A Apoptosis inhibitor 5; 73.5 33 0.0011 34.2 12.0 117 208-345 39-156 (507)
140 1lsh_A Lipovitellin (LV-1N, LV 67.5 1.5E+02 0.0052 32.6 17.1 131 73-231 441-580 (1056)
141 1elk_A Target of MYB1; superhe 65.4 26 0.00088 29.2 8.2 114 11-143 10-130 (157)
142 3hct_A TNF receptor-associated 65.1 1.7 5.8E-05 34.5 0.7 43 9-51 35-82 (118)
143 1jm7_B BARD1, BRCA1-associated 64.3 1.7 5.8E-05 34.5 0.5 51 3-54 34-87 (117)
144 2ecw_A Tripartite motif-contai 64.2 1 3.5E-05 33.1 -0.8 38 10-47 37-84 (85)
145 3m1i_C Exportin-1; heat repeat 63.1 1.1E+02 0.0037 33.5 15.0 221 70-310 14-263 (1049)
146 2ecv_A Tripartite motif-contai 61.1 1.1 3.7E-05 32.9 -1.2 38 10-47 37-84 (85)
147 1jm7_A BRCA1, breast cancer ty 60.1 3.4 0.00012 32.1 1.6 45 9-53 38-89 (112)
148 3m1i_C Exportin-1; heat repeat 59.5 40 0.0014 37.0 10.7 208 39-267 28-263 (1049)
149 1dvp_A HRS, hepatocyte growth 58.0 25 0.00084 31.1 7.1 100 27-142 13-114 (220)
150 3l9t_A Putative uncharacterize 57.3 1E+02 0.0035 27.6 10.9 138 120-277 77-218 (240)
151 3ldz_A STAM-1, signal transduc 55.9 80 0.0027 25.5 9.5 68 284-352 46-114 (140)
152 3lrq_A E3 ubiquitin-protein li 53.4 5.4 0.00019 30.5 1.7 43 10-52 41-88 (100)
153 1lsh_A Lipovitellin (LV-1N, LV 52.8 2.7E+02 0.0091 30.6 19.6 202 71-307 310-540 (1056)
154 4hat_C Exportin-1; heat repeat 52.3 45 0.0015 36.7 9.4 140 84-230 465-621 (1023)
155 4hat_C Exportin-1; heat repeat 50.2 13 0.00043 41.1 4.6 96 126-227 465-569 (1023)
156 3hcs_A TNF receptor-associated 50.0 4.1 0.00014 34.4 0.6 42 9-50 35-81 (170)
157 2egp_A Tripartite motif-contai 49.5 0.57 1.9E-05 34.2 -4.5 39 9-47 29-78 (79)
158 3a6p_A Exportin-5; exportin-5, 49.5 3.1E+02 0.011 30.5 16.3 139 73-227 12-162 (1204)
159 3ibv_A Exportin-T; karyopherin 45.7 3.3E+02 0.011 29.6 19.3 222 71-311 5-261 (980)
160 3l11_A E3 ubiquitin-protein li 45.1 2.3 7.7E-05 33.5 -1.8 44 9-52 32-87 (115)
161 1x5b_A Signal transducing adap 44.2 1.3E+02 0.0044 25.0 9.1 68 284-352 56-125 (163)
162 3gjx_A Exportin-1; transport, 43.0 3.5E+02 0.012 29.8 14.6 220 69-311 25-276 (1073)
163 3qml_C Protein SLS1, nucleotid 42.1 2.2E+02 0.0074 26.5 12.5 132 87-225 43-187 (315)
164 1vdy_A Hypothetical protein (R 41.7 52 0.0018 26.9 6.0 70 284-354 53-132 (140)
165 3a6p_A Exportin-5; exportin-5, 41.7 2.9E+02 0.0099 30.8 14.1 206 40-267 26-276 (1204)
166 2csy_A Zinc finger protein 183 39.1 14 0.00048 26.6 1.9 37 10-47 33-73 (81)
167 3ibv_A Exportin-T; karyopherin 38.2 4.2E+02 0.014 28.7 21.5 217 39-277 20-273 (980)
168 3gs3_A Symplekin, LD45768P; he 37.8 1.4E+02 0.0047 27.0 8.8 66 71-141 52-117 (257)
169 1juq_A ADP-ribosylation factor 36.3 1.4E+02 0.0049 24.9 8.2 68 284-352 54-128 (171)
170 1mhq_A ADP-ribosylation factor 35.6 1.6E+02 0.0055 24.0 8.2 68 284-352 42-116 (148)
171 3rru_A TOM1L1 protein; structu 35.2 1.9E+02 0.0064 23.8 9.3 109 17-144 17-131 (152)
172 3l9t_A Putative uncharacterize 35.1 2.4E+02 0.0083 25.1 12.3 138 72-231 70-211 (240)
173 1rmd_A RAG1; V(D)J recombinati 33.4 17 0.00057 28.3 1.7 42 9-50 40-87 (116)
174 3gae_A Protein DOA1; UFD3, CDC 33.3 93 0.0032 28.0 6.9 130 89-230 71-220 (253)
175 3ng2_A RNF4, snurf, ring finge 32.5 16 0.00056 25.3 1.3 32 10-41 35-70 (71)
176 3qml_C Protein SLS1, nucleotid 32.3 2.9E+02 0.0098 25.7 10.0 148 199-352 24-189 (315)
177 3bpq_A Antitoxin RELB3, RELB; 32.0 16 0.00055 24.3 1.0 33 11-43 14-47 (52)
178 3zyq_A Hepatocyte growth facto 31.1 2.7E+02 0.0092 24.3 10.3 68 284-352 49-118 (226)
179 3gjx_A Exportin-1; transport, 30.6 2.3E+02 0.0078 31.3 10.6 207 39-267 40-275 (1073)
180 3g2s_A C-terminal fragment of 29.5 2.3E+02 0.0079 23.1 9.3 68 284-352 52-126 (149)
181 3o2t_A Symplekin; heat repeat, 28.5 1.8E+02 0.006 28.0 8.3 65 72-141 63-127 (386)
182 1dvp_A HRS, hepatocyte growth 27.8 2.7E+02 0.0092 24.1 8.9 68 284-352 46-115 (220)
183 2djb_A Polycomb group ring fin 24.7 30 0.001 24.1 1.6 33 9-41 33-69 (72)
184 3lcz_A YCZA, inhibitor of trap 21.9 28 0.00096 23.3 0.8 15 9-23 38-53 (53)
185 2xeu_A Ring finger protein 4; 21.9 27 0.00093 23.4 0.8 31 10-40 28-62 (64)
186 1pgy_A SWA2P; UBA, ubiquitin, 20.6 32 0.0011 22.0 0.8 16 5-20 25-41 (47)
No 1
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=100.00 E-value=2.6e-34 Score=283.54 Aligned_cols=265 Identities=19% Similarity=0.202 Sum_probs=235.0
Q ss_pred HHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcC-----------CCHHHHHHHHHHHHHhccCCCchHHHHHh
Q 014196 86 WEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVST-----------EVIGRRRAAIKALIQLANGTYTNKAIMVE 154 (429)
Q Consensus 86 ~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s-----------~~~~~~~~A~~aL~nLa~~~~~nk~~iv~ 154 (429)
...+..|+++|.+++.+ +++|..|++.|++++|+.+|.+ .++.+|+.|+++|.||+.+++.+|..|..
T Consensus 46 ~~~~~~A~~aL~nls~d-~e~R~~i~~~G~l~~Lv~LL~~~~~~~~~~~~~~~~~~q~~Aa~aL~nLa~~~~~~k~~i~~ 124 (354)
T 3nmw_A 46 EHQICPAVCVLMKLSFD-EEHRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATLCS 124 (354)
T ss_dssp GGTHHHHHHHHHHHHTS-HHHHHHHHHTTHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCC-HHHHHHHHHcCCHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 34556899999999975 7999999999999999999953 24679999999999999998668888865
Q ss_pred -cCccchhhhhccCCCHHHHHHHHHHHHHhhcc--CCCccccccCCcHHHHHHhhh-cCCcHHHHHHHHHHHHHhcc-CC
Q 014196 155 -AGILTKLPKNVDAVDESTRHEFGELLLSLSSL--ANTHIPLSSSEILPFLVGILE-SGSSVETKELCIGALYNLSA-VL 229 (429)
Q Consensus 155 -~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~--~~~~~~i~~~g~i~~Lv~lL~-~~~~~~~~~~A~~aL~nLs~-~~ 229 (429)
.|+||+|+.+|.+++.+.++.++++|.+|+.. ++++..|.+.|+||+|+++|. +++. .+++.|+.+|+||+. ++
T Consensus 125 ~~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~Lv~lL~~~~~~-~~~~~A~~aL~nLs~~~~ 203 (354)
T 3nmw_A 125 MKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKE-STLKSVLSALWNLSAHCT 203 (354)
T ss_dssp CHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHTTCH
T ss_pred cCCcHHHHHHHHCCCCHHHHHHHHHHHHHHhccCCHHHHHHHHHCCCHHHHHHHHhcCCCH-HHHHHHHHHHHHHHccCh
Confidence 56699999999999999999999999999975 357888899999999999864 4555 789999999999999 56
Q ss_pred CChhHHH-hcCcHHHHHHhccCCc-----chHHHHHHHHHHhhC----ChhcHHHHhcCCCChHHHHHhcccCCChhHHH
Q 014196 230 DNARPMV-SNGVVHTLLKLCSMKE-----RLSEKSLATLGNLVV----TSTGKKAMEDSPLVPESLIEILTWEEKPKCQE 299 (429)
Q Consensus 230 ~n~~~iv-~~G~v~~Lv~lL~~~~-----~~~~~a~~~L~~La~----~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e 299 (429)
+|+..++ +.|++|+|+.+|...+ ++++.|+.+|.||+. ++++++.+.+.|+++ .|+++|. +++...++
T Consensus 204 ~nk~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~g~i~-~Lv~lL~-~~~~~v~~ 281 (354)
T 3nmw_A 204 ENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQ-TLLQHLK-SHSLTIVS 281 (354)
T ss_dssp HHHHHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHH-HHHHHTT-CSCHHHHH
T ss_pred hhhHHHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhhccCCHHHHHHHHHcCCHH-HHHHHHc-CCChHHHH
Confidence 7888888 7899999999998652 389999999999995 899999999988875 8999998 78999999
Q ss_pred HHHHHHHHHhhCCHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHhcc
Q 014196 300 LSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKDER 354 (429)
Q Consensus 300 ~A~~~L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~~~ 354 (429)
.|+++|++++.+++++++.+++.|++|+|++++.++++.+++.|+|.|.+|....
T Consensus 282 ~A~~aL~nLa~~~~~~~~~i~~~G~i~~Lv~LL~s~~~~i~~~A~~aL~nL~~~~ 336 (354)
T 3nmw_A 282 NACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNLMANR 336 (354)
T ss_dssp HHHHHHHHHTSSCHHHHHHHHHTTHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCC
Confidence 9999999999888999999999999999999999999999999999999999643
No 2
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=100.00 E-value=4e-34 Score=292.58 Aligned_cols=280 Identities=20% Similarity=0.165 Sum_probs=239.3
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHHHH
Q 014196 74 LQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMV 153 (429)
Q Consensus 74 l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~iv 153 (429)
++.+|..|.+++++.|..|+..|++++.+++.++..+++.|+||.||.+|+++++.+++.|+++|.||+.++++||..|+
T Consensus 4 l~~lv~~L~s~~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~i~ 83 (457)
T 1xm9_A 4 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETR 83 (457)
T ss_dssp HHHHHHHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 78999999999999999999999999988888899999999999999999999999999999999999998668999999
Q ss_pred hcCccchhhhhcc-CCCHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhh--------cCC-------cHHHHHH
Q 014196 154 EAGILTKLPKNVD-AVDESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILE--------SGS-------SVETKEL 217 (429)
Q Consensus 154 ~~G~i~~Lv~lL~-~~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~--------~~~-------~~~~~~~ 217 (429)
++|+||+|+.+|. +++.+.++.++++|++|+..++++..+.+ |++|+|+++|. ++. ...+.++
T Consensus 84 ~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~~~~~~~i~~-g~i~~Lv~ll~~~~s~~~~~~~~~~~e~~~~~v~~~ 162 (457)
T 1xm9_A 84 RQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFN 162 (457)
T ss_dssp HTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHHHHHH-HHHHHHHHHTTHHHHTCC---------CCCHHHHHH
T ss_pred HcCCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCHHhHHHHHh-ccHHHHHHHHhccccccccCccchhcccccHHHHHH
Confidence 9999999999998 78899999999999999999888988888 99999999993 221 1246669
Q ss_pred HHHHHHHhccCCCChhHHHhc-CcHHHHHHhccC------C-cchHHHHHHHHHHhhCC---------------------
Q 014196 218 CIGALYNLSAVLDNARPMVSN-GVVHTLLKLCSM------K-ERLSEKSLATLGNLVVT--------------------- 268 (429)
Q Consensus 218 A~~aL~nLs~~~~n~~~iv~~-G~v~~Lv~lL~~------~-~~~~~~a~~~L~~La~~--------------------- 268 (429)
|+++|+|||.+++++..+++. |++++|+.+|.+ . +.+++.|+.+|.+|+..
T Consensus 163 a~~aL~nLs~~~~~~~~i~~~~g~i~~Lv~lL~~~~~~~~~~~~~~e~a~~~L~nLs~~~~~~~~~~~~~~~~~~~~~~~ 242 (457)
T 1xm9_A 163 ATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYT 242 (457)
T ss_dssp HHHHHHHHTTSHHHHHHHTTSTTHHHHHHHHHHHHHHHTCTTCTTHHHHHHHHHHHTTTHHHHSCCHHHHHHHTC-----
T ss_pred HHHHHHHHccCHHHHHHHHHcCCCHHHHHHHHHhhccccCCchHHHHHHHHHHHhcccchhccCcchhhhcccccccccc
Confidence 999999999998888999998 999999999974 3 37899999999999732
Q ss_pred ------------------------------hhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHHHhhCCH----H
Q 014196 269 ------------------------------STGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMILAHQSS----E 314 (429)
Q Consensus 269 ------------------------------~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~~~~----~ 314 (429)
+++.+.+.+.+.+ +.|+.+|....++..++.|+++|+++|.++. .
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l-~~L~~lL~~~~~~~~~e~a~~aL~nl~~~~~~~~~~ 321 (457)
T 1xm9_A 243 EKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAI-RTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSG 321 (457)
T ss_dssp -----------------------CCCCCSSCCGGGGGGSHHHH-HHHHHHHHHCCCHHHHHHHHHHHHHHTTCSSSHHHH
T ss_pred cccccchhhccchhhhhccccCCccccccCchHHHHHhCcchH-HHHHHHHhhcCCHHHHHHHHHHHHHhccCcCcchHH
Confidence 1122233333333 4788888745678999999999999998542 2
Q ss_pred H-HHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHhccc
Q 014196 315 Q-RDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKDERQ 355 (429)
Q Consensus 315 ~-~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~~~~ 355 (429)
. +..+.++|++|.|+.++.+++.++++.|+|+|+++..+.+
T Consensus 322 ~~~~~v~~~~~l~~Lv~LL~~~~~~v~~~A~~aL~nls~~~~ 363 (457)
T 1xm9_A 322 MSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 363 (457)
T ss_dssp HHHHHHTTSCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHcCCchHHHHHHhCCCHhHHHHHHHHHHHHhcCHH
Confidence 3 3344468999999999999999999999999999997554
No 3
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=100.00 E-value=1.9e-33 Score=285.55 Aligned_cols=260 Identities=19% Similarity=0.209 Sum_probs=231.5
Q ss_pred HHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcC-----------CCHHHHHHHHHHHHHhccCCCchHHHHHh-cCc
Q 014196 90 EMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVST-----------EVIGRRRAAIKALIQLANGTYTNKAIMVE-AGI 157 (429)
Q Consensus 90 ~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s-----------~~~~~~~~A~~aL~nLa~~~~~nk~~iv~-~G~ 157 (429)
..|+++|.+++. ++++|..|++.|++++|+.+|.. .++.+++.|+|+|.||+.+++.++..+.. .|+
T Consensus 166 ~qAv~aL~nls~-~~e~R~~i~~~G~l~~Lv~LL~~~~~~~~~~~~~~~~~l~~~Aa~aL~nLa~~~~~~k~~i~~~~Ga 244 (458)
T 3nmz_A 166 CPAVCVLMKLSF-DEEHRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATLCSMKGC 244 (458)
T ss_dssp HHHHHHHHHHTT-SHHHHHHHHHTTHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHHH
T ss_pred HHHHHHHHHhcC-CHHHHHHHHHCCCHHHHHHHHhhhhcccccccCCCCHHHHHHHHHHHHHHhCCCcccHHHHHHcCCc
Confidence 389999999976 58999999999999999999952 24678999999999999998657877764 566
Q ss_pred cchhhhhccCCCHHHHHHHHHHHHHhhcc--CCCccccccCCcHHHHHHhhh-cCCcHHHHHHHHHHHHHhcc-CCCChh
Q 014196 158 LTKLPKNVDAVDESTRHEFGELLLSLSSL--ANTHIPLSSSEILPFLVGILE-SGSSVETKELCIGALYNLSA-VLDNAR 233 (429)
Q Consensus 158 i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~--~~~~~~i~~~g~i~~Lv~lL~-~~~~~~~~~~A~~aL~nLs~-~~~n~~ 233 (429)
||+|+.+|.+.+.+.++.++++|.+|+.. ++++..|.+.|+||+|+++|. +++. .+++.|+.+|+||+. +++|+.
T Consensus 245 Ip~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI~~LV~lLl~s~~~-~v~~~A~~aL~nLs~~~~~nk~ 323 (458)
T 3nmz_A 245 MRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKE-STLKSVLSALWNLSAHCTENKA 323 (458)
T ss_dssp HHHHHHGGGCSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTHHHHHHHHHTTCCSH-HHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHcCCHHHHHHHHhcCCCH-HHHHHHHHHHHHHccCCHHHHH
Confidence 99999999999999999999999999975 357888889999999999864 4554 789999999999999 668888
Q ss_pred HHH-hcCcHHHHHHhccCCc-----chHHHHHHHHHHhh----CChhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHH
Q 014196 234 PMV-SNGVVHTLLKLCSMKE-----RLSEKSLATLGNLV----VTSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSAY 303 (429)
Q Consensus 234 ~iv-~~G~v~~Lv~lL~~~~-----~~~~~a~~~L~~La----~~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~ 303 (429)
.++ +.|++|+|+.+|.... .+++.|+.+|.||+ .++++++.|.+.|+++ .|+++|. +++...++.|++
T Consensus 324 ~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~-~Lv~LL~-~~~~~v~~~A~~ 401 (458)
T 3nmz_A 324 DICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQ-TLLQHLK-SHSLTIVSNACG 401 (458)
T ss_dssp HHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHH-HHHHHSS-CSCHHHHHHHHH
T ss_pred HHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHhcccCCHHHHHHHHHcccHH-HHHHHHc-CCChHHHHHHHH
Confidence 888 7899999999998653 38999999999999 4899999999988876 8999998 789999999999
Q ss_pred HHHHHhhCCHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHhc
Q 014196 304 ILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKDE 353 (429)
Q Consensus 304 ~L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~~ 353 (429)
+|++++.+++++++.+++.|++|+|+.++.++++.+++.|+|.|.+|...
T Consensus 402 aL~nLa~~~~~~~~~i~~~G~I~~Lv~LL~s~~~~v~~~Aa~AL~nL~~~ 451 (458)
T 3nmz_A 402 TLWNLSARNPKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNLMAN 451 (458)
T ss_dssp HHHHHHSSCHHHHHHHHHHTHHHHHHTTTTCSSHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCHHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcC
Confidence 99999988899999999999999999999999999999999999999863
No 4
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=100.00 E-value=6.2e-33 Score=288.11 Aligned_cols=284 Identities=19% Similarity=0.134 Sum_probs=237.4
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccC-CCchH
Q 014196 71 CVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANG-TYTNK 149 (429)
Q Consensus 71 ~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~-~~~nk 149 (429)
...++.+|..|.+++++.|..|+..|++++.+++++|..+++.|+||+||.+|.+++.++|+.|+++|.||+.+ +++||
T Consensus 47 ~~~i~~LV~~L~s~~~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s~~~~vq~~Aa~AL~nLa~~~~~~nk 126 (584)
T 3l6x_A 47 QPELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNK 126 (584)
T ss_dssp CCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHHHHHTSSSCHHHH
T ss_pred cccHHHHHHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHCCCCHHHHHHHHHHHHHHHccCCHHHH
Confidence 34599999999999999999999999999998899999999999999999999999999999999999999985 45799
Q ss_pred HHHHhcCccchhhhhccC-CCHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhh---c--------------CCc
Q 014196 150 AIMVEAGILTKLPKNVDA-VDESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILE---S--------------GSS 211 (429)
Q Consensus 150 ~~iv~~G~i~~Lv~lL~~-~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~---~--------------~~~ 211 (429)
..|+++|+||+|+.+|.+ .+.+.++.++.+|++||.+++++..|.. ++||+|++++. + .+.
T Consensus 127 ~~I~~~GaIp~LV~LL~s~~~~~~~e~aa~aL~nLS~~~~~k~~I~~-~alp~Lv~LL~~p~sg~~~~~~~~~k~~~~~d 205 (584)
T 3l6x_A 127 IAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSIKMEIVD-HALHALTDEVIIPHSGWEREPNEDCKPRHIEW 205 (584)
T ss_dssp HHHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTTSGGGHHHHHH-HTHHHHHHHTHHHHHCCC----------CCCC
T ss_pred HHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCchhhHHHHh-ccHHHHHHHHhccccccccccccccccccccc
Confidence 999999999999999987 5678899999999999999899999985 57999999872 1 112
Q ss_pred HHHHHHHHHHHHHhccCCCC-hhHHHhc-CcHHHHHHhccC------Cc-chHHHHHHHHHHhhCChhcH--------H-
Q 014196 212 VETKELCIGALYNLSAVLDN-ARPMVSN-GVVHTLLKLCSM------KE-RLSEKSLATLGNLVVTSTGK--------K- 273 (429)
Q Consensus 212 ~~~~~~A~~aL~nLs~~~~n-~~~iv~~-G~v~~Lv~lL~~------~~-~~~~~a~~~L~~La~~~e~~--------~- 273 (429)
..++++|.++|+|||.+.++ +..|++. |++++|+.+|.. .+ ..++.|+.+|.||+...+.. .
T Consensus 206 ~~V~~nAa~~L~NLs~~~~~~R~~i~~~~Gli~~LV~~L~~~~~~~~~~~~~~enav~aL~NLs~~~~~e~~~~~~~~~~ 285 (584)
T 3l6x_A 206 ESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDSKLVENCVCLLRNLSYQVHREIPQAERYQEA 285 (584)
T ss_dssp HHHHHHHHHHHHHHTSSCHHHHHHHHHSTTHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHTTHHHHSTTCCC----
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHcCCcHHHHHHHHHHhhcccCccHHHHHHHHHHHHHhhccccccccchhhhhhh
Confidence 37899999999999997754 8888885 667899999863 23 78999999999999752100 0
Q ss_pred --------HHhcCCCC--------hHHHHHhcccCCChhHHHHHHHHHHHHhhCC----HHHHHHHHhCCchHHHHHHhh
Q 014196 274 --------AMEDSPLV--------PESLIEILTWEEKPKCQELSAYILMILAHQS----SEQRDKMAKSGIVHVSLQLAL 333 (429)
Q Consensus 274 --------~i~~~~~i--------~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~~~----~~~~~~i~~~G~v~~L~~ll~ 333 (429)
.....+|+ ++.|+.+|....++..+|+|+++|.+||.+. ...+..+.++|++|.|+.|+.
T Consensus 286 ~~~~~~~~~~~~~~Gve~L~~~~~v~~Ll~LL~~s~~~~v~E~Aa~AL~nL~ag~~~~~~~~~~~v~~~~glp~Lv~LL~ 365 (584)
T 3l6x_A 286 APNVANNTGTSPARGYELLFQPEVVRIYISLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLT 365 (584)
T ss_dssp ----------CCCCGGGGGGSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHSSCSHHHHHHHHHHTSHHHHHHHHHGGG
T ss_pred cccccccccccCchhHHHHhcccHHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCccccHHHHHHHHHcCcHHHHHHHHc
Confidence 01122333 2357888864568999999999999999764 234555666799999999999
Q ss_pred cCCHHHHHHHHHHHHHHHhccc
Q 014196 334 LGSPLAQRRASKLLQWFKDERQ 355 (429)
Q Consensus 334 ~~~~~~k~~A~~lL~~l~~~~~ 355 (429)
.+++.+++.|+|+|++|...++
T Consensus 366 s~~~~v~~~A~~aL~nLs~~~~ 387 (584)
T 3l6x_A 366 NEHERVVKAASGALRNLAVDAR 387 (584)
T ss_dssp CSCHHHHHHHHHHHHHHHTTCS
T ss_pred CCCHHHHHHHHHHHHHHhCChh
Confidence 9999999999999999998653
No 5
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=100.00 E-value=3.6e-31 Score=274.35 Aligned_cols=318 Identities=19% Similarity=0.187 Sum_probs=267.9
Q ss_pred hhHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCc
Q 014196 69 DDCVLLQKSVKRLHFG-SWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYT 147 (429)
Q Consensus 69 ~~~~~l~~lv~~L~~~-~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~ 147 (429)
.+.+.+|.||+.|+.. ++..|..|+++|.+++..++++++.+++.|+||.|+.+|.+++.++++.|+|+|+||+.+++.
T Consensus 97 i~~G~ip~LV~lL~~~~~~~lq~~Aa~aL~nias~~~e~~~~vv~~GaIp~Lv~lL~s~~~~v~e~A~~aL~nLa~d~~~ 176 (510)
T 3ul1_B 97 IRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSA 176 (510)
T ss_dssp HHTTHHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHH
T ss_pred HHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHH
Confidence 3567899999999754 689999999999999999999999999999999999999999999999999999999998877
Q ss_pred hHHHHHhcCccchhhhhccCCC-----HHHHHHHHHHHHHhhccCCCccccc-cCCcHHHHHHhhhcCCcHHHHHHHHHH
Q 014196 148 NKAIMVEAGILTKLPKNVDAVD-----ESTRHEFGELLLSLSSLANTHIPLS-SSEILPFLVGILESGSSVETKELCIGA 221 (429)
Q Consensus 148 nk~~iv~~G~i~~Lv~lL~~~~-----~~~~~~aa~~L~~Ls~~~~~~~~i~-~~g~i~~Lv~lL~~~~~~~~~~~A~~a 221 (429)
++..+++.|++++|+.++...+ ....+.++++|.+++........+. ..|++|.|+++|.+++. +++..|+++
T Consensus 177 ~r~~v~~~G~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~~~~~~~~~~~~~~~~lp~L~~LL~~~~~-~v~~~A~~a 255 (510)
T 3ul1_B 177 FRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDP-EVLADSCWA 255 (510)
T ss_dssp HHHHHHHTTCHHHHHHHTCSSCGGGSCHHHHHHHHHHHHHHHCCCSSCCCHHHHHHHHHHHHHHTTCSCH-HHHHHHHHH
T ss_pred HHHHHHHcCChHHHHHHHHhccchhhhHHHHHHHHHHHHHHhhcccchhHHHHHHhHHHHHHHHHhcCCH-HHHHHHHHH
Confidence 7999999999999999998765 3456788899999997765554443 46899999999999887 799999999
Q ss_pred HHHhccCCCCh-hHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhC-ChhcHHHHhcCCCChHHHHHhcccCCChhHH
Q 014196 222 LYNLSAVLDNA-RPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVV-TSTGKKAMEDSPLVPESLIEILTWEEKPKCQ 298 (429)
Q Consensus 222 L~nLs~~~~n~-~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~-~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~ 298 (429)
|.+|+.++.+. ..+++.|+++.|+.+|.+.+ .++..++.+|.+++. +++.+..+.+.|+++ .|+.+|. +.++..+
T Consensus 256 L~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~al~aL~nl~~~~~~~~~~i~~~g~l~-~L~~LL~-~~~~~v~ 333 (510)
T 3ul1_B 256 ISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALA-VFPSLLT-NPKTNIQ 333 (510)
T ss_dssp HHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGG-GCC-CTT-CSSHHHH
T ss_pred HHHHhhchhhhHHHHHhcccchhhhhhhcCCChhhhhHHHHHHHHhhcCCHHHHHHHhhccchH-HHHHHhc-CCCHHHH
Confidence 99999877655 66788999999999998876 899999999999987 567788888988876 8999998 7889999
Q ss_pred HHHHHHHHHHhhCCHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHhcc---ccC-CCCCCCCCcccc----c
Q 014196 299 ELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKDER---QAK-MGPHSGPQTRRV----S 370 (429)
Q Consensus 299 e~A~~~L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~~~---~~~-~~~~~~~~~~~~----~ 370 (429)
+.|+++|.+|+.++++.++.+.+.|++|.|+.++.+++..+|+.|+|+|.++.... +.. .. ..+.+ .
T Consensus 334 ~~A~~aL~nl~a~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~Nl~~~~~~~~~~~L~-----~~g~i~~L~~ 408 (510)
T 3ul1_B 334 KEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLV-----HCGIIEPLMN 408 (510)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCCHHHHHHHH-----HTTCHHHHHH
T ss_pred HHHHHHHHHHHcCcHHHHHHHHhcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHccCCHHHHHHHH-----HCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987532 110 00 01111 2
Q ss_pred cCCCCChhhhHHHHHHHHHHHHHH
Q 014196 371 IGSPVSPREAQEGKKMMKNLVQQS 394 (429)
Q Consensus 371 ~~~~~~~~~~~~~k~~l~~~~~~~ 394 (429)
+....+.+....+-.+|.+|++..
T Consensus 409 LL~~~d~~i~~~~L~aL~nil~~~ 432 (510)
T 3ul1_B 409 LLSAKDTKIIQVILDAISNIFQAA 432 (510)
T ss_dssp GGGCSCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHh
Confidence 222334566777777888888754
No 6
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=99.98 E-value=3.2e-31 Score=283.94 Aligned_cols=317 Identities=15% Similarity=0.135 Sum_probs=264.0
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhch-----------------------------HHH---HHHHhcCcHH
Q 014196 70 DCVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDV-----------------------------KIK---KLMAELGVIQ 117 (429)
Q Consensus 70 ~~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~-----------------------------~~r---~~i~~~G~i~ 117 (429)
+.+.+|.||..|++++...+..|+..|.+++...+ .++ +.++++|++|
T Consensus 419 d~g~Ip~LV~LL~s~d~~i~~~al~~L~NLt~~~d~q~~~~~l~~la~~s~~~v~~~~~ld~~~~v~~r~~~VveaGaVp 498 (810)
T 3now_A 419 DKASIHALMDLARGGNQSCLYGVVTTFVNLCNAYEKQEMLPEMIELAKFAKQHIPEEHELDDVDFINKRITVLANEGITT 498 (810)
T ss_dssp CHHHHHHHHHHHHTTCGGGHHHHHHHHHHHTTCSCCCCCCCSCGGGTTTTCCSCCCSSCHHHHHHHHHHHHHHHHTTHHH
T ss_pred ccchHHHHHHHhCCCChHHHHHHHHHHHHHcCCchhhhhhHHHHHHHHHhhccCccccccccHHHHHHHHHHHHHCcCHH
Confidence 46789999999999998999999999999997431 233 7889999999
Q ss_pred HHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccccc---
Q 014196 118 MLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPLS--- 194 (429)
Q Consensus 118 ~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~--- 194 (429)
+||.+|.++++.+|+.|+|+|.||+.+. +++..|+++|++|+|+.+|.+++...++.|+++|.+|+...+....+.
T Consensus 499 ~LV~LL~s~s~~vqe~Aa~aL~NLA~d~-~~r~~Vv~~Gaip~Lv~LL~s~~~~~k~~Aa~AL~nL~~~~~p~~~~~~~~ 577 (810)
T 3now_A 499 ALCALAKTESHNSQELIARVLNAVCGLK-ELRGKVVQEGGVKALLRMALEGTEKGKRHATQALARIGITINPEVSFSGQR 577 (810)
T ss_dssp HHHHHHTCCCHHHHHHHHHHHHHHHTSH-HHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHTTTHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHcCCH-HHHHHHHHCCCHHHHHHHHccCCHHHHHHHHHHHHHHhcCCChhhhhcchh
Confidence 9999999999999999999999999875 699999999999999999999999999999999999997654433332
Q ss_pred cCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCC-CChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCChhcH
Q 014196 195 SSEILPFLVGILESGSSVETKELCIGALYNLSAVL-DNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTSTGK 272 (429)
Q Consensus 195 ~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~-~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~e~~ 272 (429)
..|++|+|+.+|.++.....+..|+++|.||+.++ +++..++++|++|.|+.+|.+.+ .+++.|+.+|.||+.+++.+
T Consensus 578 ~~~aIppLv~LL~~~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~s~~~~Vq~~A~~~L~NLa~~~~~~ 657 (810)
T 3now_A 578 SLDVIRPLLNLLQQDCTALENFESLMALTNLASMNESVRQRIIKEQGVSKIEYYLMEDHLYLTRAAAQCLCNLVMSEDVI 657 (810)
T ss_dssp HHHTHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSCCTTHHHHHHHHHHHHTTSHHHH
T ss_pred hhcHHHHHHHHhCCCCcHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCChHHH
Confidence 24699999999987644344568999999999975 67889999999999999998765 89999999999999999999
Q ss_pred HHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHHHhhCCHHHHHHHHh-CCchHHHHHHhhcCCHHHHHHHHHHHHHHH
Q 014196 273 KAMEDSPLVPESLIEILTWEEKPKCQELSAYILMILAHQSSEQRDKMAK-SGIVHVSLQLALLGSPLAQRRASKLLQWFK 351 (429)
Q Consensus 273 ~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~~~~~~~~~i~~-~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~ 351 (429)
..+....+..+.|+.++. +.+...++.|+++|.+|+.+++...+.+++ +|++|+|+.++.+++.++|+.|+|+|.++.
T Consensus 658 ~~~v~~~g~l~~Lv~LL~-s~d~~vq~~Aa~ALanLt~~s~~~~~~ii~~~g~I~~Lv~LL~s~d~~vq~~A~~aL~NL~ 736 (810)
T 3now_A 658 KMFEGNNDRVKFLALLCE-DEDEETATACAGALAIITSVSVKCCEKILAIASWLDILHTLIANPSPAVQHRGIVIILNMI 736 (810)
T ss_dssp HHHHSSSSHHHHHHHGGG-CSSHHHHHHHHHHHHHHHHHCHHHHHHHHTSTTHHHHHHHHHTCSSHHHHHHHHHHHHHHH
T ss_pred HHHHhccCcHHHHHHHhc-CCCHHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 888853344569999998 788999999999999999977888889998 899999999999999999999999999987
Q ss_pred hcc--ccC-CCCCCCCCcccc----ccC-CC--CChhhhHHHHHHHHHHHHH
Q 014196 352 DER--QAK-MGPHSGPQTRRV----SIG-SP--VSPREAQEGKKMMKNLVQQ 393 (429)
Q Consensus 352 ~~~--~~~-~~~~~~~~~~~~----~~~-~~--~~~~~~~~~k~~l~~~~~~ 393 (429)
... +.+ .. ..+.+ .+. .. .+.+..+.+.++|+.+++.
T Consensus 737 ~~s~e~~~~l~-----e~G~i~~L~~LL~~~d~~~~~i~e~Al~aL~~ll~~ 783 (810)
T 3now_A 737 NAGEEIAKKLF-----ETDIMELLSGLGQLPDDTRAKAREVATQCLAAAERY 783 (810)
T ss_dssp TTCHHHHHHHH-----TSTHHHHHTTSCCCTTSTTHHHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHH-----HCCCHHHHHHHHhCcccCcHHHHHHHHHHHHHHHhC
Confidence 532 111 00 11112 221 12 2566778888899988874
No 7
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=99.98 E-value=9.3e-31 Score=272.38 Aligned_cols=318 Identities=19% Similarity=0.186 Sum_probs=268.6
Q ss_pred hhHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCc
Q 014196 69 DDCVLLQKSVKRLHFG-SWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYT 147 (429)
Q Consensus 69 ~~~~~l~~lv~~L~~~-~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~ 147 (429)
.+.+.+|.||+.|... ++..|..|+++|.+++.++++++..+++.|+||.|+.+|.+++.++++.|+|+|+||+.+++.
T Consensus 116 i~~G~ip~Lv~lL~~~~~~~~q~~Aa~aL~nia~~~~~~~~~vv~~Gaip~Lv~LL~s~~~~v~e~A~~aL~nLa~~~~~ 195 (529)
T 3tpo_A 116 IRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGAGSA 195 (529)
T ss_dssp HHTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHH
T ss_pred HHCCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhccCHH
Confidence 3567899999999754 689999999999999999999999999999999999999999999999999999999998877
Q ss_pred hHHHHHhcCccchhhhhccCCC-----HHHHHHHHHHHHHhhccCCCccccc-cCCcHHHHHHhhhcCCcHHHHHHHHHH
Q 014196 148 NKAIMVEAGILTKLPKNVDAVD-----ESTRHEFGELLLSLSSLANTHIPLS-SSEILPFLVGILESGSSVETKELCIGA 221 (429)
Q Consensus 148 nk~~iv~~G~i~~Lv~lL~~~~-----~~~~~~aa~~L~~Ls~~~~~~~~i~-~~g~i~~Lv~lL~~~~~~~~~~~A~~a 221 (429)
++..+++.|++++|+.+|...+ ....+.++++|.+++........+. ..|++|.|+++|.+++. +++.+|+++
T Consensus 196 ~r~~i~~~g~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~~~~~~~~~~~~~~~~lp~L~~LL~~~~~-~v~~~a~~a 274 (529)
T 3tpo_A 196 FRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDP-EVLADSCWA 274 (529)
T ss_dssp HHHHHHHTTCHHHHHHTTCSSCGGGSCHHHHHHHHHHHHHHHCCCTTCCCHHHHHHHHHHHHHHTTSSCH-HHHHHHHHH
T ss_pred HHHHHHHcCCcHHHHHHHhccchhHhHHHHHHHHHHHHHHHHhcccchhhHHHHhhHHHHHHHHhcCCcH-HHHHHHHHH
Confidence 8999999999999999998655 3457788899999997765544443 47899999999999987 799999999
Q ss_pred HHHhccCCCCh-hHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhC-ChhcHHHHhcCCCChHHHHHhcccCCChhHH
Q 014196 222 LYNLSAVLDNA-RPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVV-TSTGKKAMEDSPLVPESLIEILTWEEKPKCQ 298 (429)
Q Consensus 222 L~nLs~~~~n~-~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~-~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~ 298 (429)
|.+|+.++.+. ..+++.|++|.|+.+|.+.+ .++..++.+|.+++. +++.+..+.+.|+++ .|+.+|. ++++..+
T Consensus 275 L~~l~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~nl~~~~~~~~~~i~~~g~l~-~L~~LL~-~~~~~i~ 352 (529)
T 3tpo_A 275 ISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALA-VFPSLLT-NPKTNIQ 352 (529)
T ss_dssp HHHHHSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGG-GHHHHTT-CSSHHHH
T ss_pred HHHhhhhhhhhHHHHHhccchHHHHHHhcCCChhHHHHHHHHHHHHHccchHHHHHHhhcccHH-HHHHHHc-CCCHHHH
Confidence 99999877655 66788999999999999876 899999999999987 577788889988886 8999998 7899999
Q ss_pred HHHHHHHHHHhhCCHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHhcc---ccC-CCCCCCCCcccc----c
Q 014196 299 ELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKDER---QAK-MGPHSGPQTRRV----S 370 (429)
Q Consensus 299 e~A~~~L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~~~---~~~-~~~~~~~~~~~~----~ 370 (429)
+.|+++|.+|+.+++..+..+++.|++|.|+.++.+++..+++.|+|+|.++...+ +.+ .. ..+.+ .
T Consensus 353 ~~a~~aL~nl~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl~~~~~~~~~~~l~-----~~g~i~~L~~ 427 (529)
T 3tpo_A 353 KEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKAAAWAITNYTSGGTVEQIVYLV-----HCGIIEPLMN 427 (529)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHH-----HTTCHHHHHH
T ss_pred HHHHHHHHHHhcccHHHHHHHHhcCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHHHH-----HCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987532 110 00 01111 2
Q ss_pred cCCCCChhhhHHHHHHHHHHHHHH
Q 014196 371 IGSPVSPREAQEGKKMMKNLVQQS 394 (429)
Q Consensus 371 ~~~~~~~~~~~~~k~~l~~~~~~~ 394 (429)
+....+.+...-+=.+|.+|++..
T Consensus 428 LL~~~d~~i~~~~L~aL~nil~~~ 451 (529)
T 3tpo_A 428 LLSAKDTKIIQVILDAISNIFQAA 451 (529)
T ss_dssp GGGCSCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHh
Confidence 222334556666777888887643
No 8
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=99.97 E-value=6.1e-31 Score=268.96 Aligned_cols=282 Identities=17% Similarity=0.131 Sum_probs=240.4
Q ss_pred hhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhc-CCCHHHHHHHHHHHHHhccCCCc
Q 014196 69 DDCVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVS-TEVIGRRRAAIKALIQLANGTYT 147 (429)
Q Consensus 69 ~~~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~-s~~~~~~~~A~~aL~nLa~~~~~ 147 (429)
.+.+.++.||+.|.++++..+..|+++|++++.+++++|..+++.|+||+|+.+|. ++++++++.|+|+|.||+.++ +
T Consensus 41 ~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~i~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~~-~ 119 (457)
T 1xm9_A 41 YQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD-E 119 (457)
T ss_dssp HHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSS-S
T ss_pred HHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCH-H
Confidence 34578999999999999999999999999999987899999999999999999999 889999999999999999995 6
Q ss_pred hHHHHHhcCccchhhhhcc--------CC--------CHHHHHHHHHHHHHhhccCCCccccccC-CcHHHHHHhhhcC-
Q 014196 148 NKAIMVEAGILTKLPKNVD--------AV--------DESTRHEFGELLLSLSSLANTHIPLSSS-EILPFLVGILESG- 209 (429)
Q Consensus 148 nk~~iv~~G~i~~Lv~lL~--------~~--------~~~~~~~aa~~L~~Ls~~~~~~~~i~~~-g~i~~Lv~lL~~~- 209 (429)
+|..|++ |++|+|+.+|. +. +.+..+.|+++|++|+..++++..+.+. |++|+|+.+|.++
T Consensus 120 ~~~~i~~-g~i~~Lv~ll~~~~s~~~~~~~~~~~e~~~~~v~~~a~~aL~nLs~~~~~~~~i~~~~g~i~~Lv~lL~~~~ 198 (457)
T 1xm9_A 120 LKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQNCV 198 (457)
T ss_dssp THHHHHH-HHHHHHHHHTTHHHHTCC---------CCCHHHHHHHHHHHHHHTTSHHHHHHHTTSTTHHHHHHHHHHHHH
T ss_pred hHHHHHh-ccHHHHHHHHhccccccccCccchhcccccHHHHHHHHHHHHHHccCHHHHHHHHHcCCCHHHHHHHHHhhc
Confidence 9999999 99999999992 22 2445569999999999887778888887 9999999888741
Q ss_pred -----C--------------------------------------------------------------------------
Q 014196 210 -----S-------------------------------------------------------------------------- 210 (429)
Q Consensus 210 -----~-------------------------------------------------------------------------- 210 (429)
+
T Consensus 199 ~~~~~~~~~~e~a~~~L~nLs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (457)
T 1xm9_A 199 AASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGW 278 (457)
T ss_dssp HHTCTTCTTHHHHHHHHHHHTTTHHHHSCCHHHHHHHTC----------------------------CCCCCSSCCGGGG
T ss_pred cccCCchHHHHHHHHHHHhcccchhccCcchhhhcccccccccccccccchhhccchhhhhccccCCccccccCchHHHH
Confidence 1
Q ss_pred ------------------cHHHHHHHHHHHHHhccCCCCh-----h-HHHhcCcHHHHHHhccCCc-chHHHHHHHHHHh
Q 014196 211 ------------------SVETKELCIGALYNLSAVLDNA-----R-PMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNL 265 (429)
Q Consensus 211 ------------------~~~~~~~A~~aL~nLs~~~~n~-----~-~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~L 265 (429)
.+..++.|+++|+||+...... + .+.+.|++|.|+.+|.+.+ ++++.|+.+|.||
T Consensus 279 l~~~~~l~~L~~lL~~~~~~~~~e~a~~aL~nl~~~~~~~~~~~~~~~v~~~~~l~~Lv~LL~~~~~~v~~~A~~aL~nl 358 (457)
T 1xm9_A 279 LYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNM 358 (457)
T ss_dssp GGSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTCSSSHHHHHHHHHHTTSCCHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred HhCcchHHHHHHHHhhcCCHHHHHHHHHHHHHhccCcCcchHHHHHHHHHHcCCchHHHHHHhCCCHhHHHHHHHHHHHH
Confidence 1245667889999999765432 2 2346899999999999876 8999999999999
Q ss_pred hCChhcHHHHhcCCCChHHHHHhcccCCC------hhHHHHHHHHHHHHhhCCHHHHHHHHhCCchHHHHHHhhcC-CHH
Q 014196 266 VVTSTGKKAMEDSPLVPESLIEILTWEEK------PKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLG-SPL 338 (429)
Q Consensus 266 a~~~e~~~~i~~~~~i~~~Lv~~L~~~~s------~~~~e~A~~~L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~~-~~~ 338 (429)
+.+++.+..|.. +++ +.|+++|. .++ +.....++++|.++..+++++...+.+.|++++|+.++.++ +++
T Consensus 359 s~~~~~~~~i~~-~~i-~~Lv~lL~-~~~~~~~~~~~v~~~~l~~l~ni~~~~~~~~~~i~~~g~l~~L~~L~~~~~~~~ 435 (457)
T 1xm9_A 359 SRHPLLHRVMGN-QVF-PEVTRLLT-SHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPK 435 (457)
T ss_dssp HTSGGGHHHHHH-HTH-HHHHHTTT-SCCSCSTTHHHHHHHHHHHHHHHHTTCTHHHHHHCCHHHHHHHHHHHHCTTCHH
T ss_pred hcCHHHHHHHHH-hhh-HHHHHhcc-CCCCCCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHcCCHHHHHHHHcCCCcHH
Confidence 999888888776 666 48999998 443 25677889999999888888999999999999999999999 999
Q ss_pred HHHHHHHHHHHHHhccc
Q 014196 339 AQRRASKLLQWFKDERQ 355 (429)
Q Consensus 339 ~k~~A~~lL~~l~~~~~ 355 (429)
++++|+|+|.++..+.+
T Consensus 436 i~~~A~~~L~~~~~~~~ 452 (457)
T 1xm9_A 436 AAEAARLLLSDMWSSKE 452 (457)
T ss_dssp HHHHHHHHHHTTSSSTT
T ss_pred HHHHHHHHHHHHHcchh
Confidence 99999999999886543
No 9
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=99.97 E-value=3.7e-31 Score=268.81 Aligned_cols=316 Identities=17% Similarity=0.131 Sum_probs=256.4
Q ss_pred hHHHHHHHHHHhcCC------------CHHHHHHHHHHHHHHhhhchHHHHHHHhcCcH----------HHHHHhhcCCC
Q 014196 70 DCVLLQKSVKRLHFG------------SWEEKEMAAKEIEKLAKEDVKIKKLMAELGVI----------QMLVSMVSTEV 127 (429)
Q Consensus 70 ~~~~l~~lv~~L~~~------------~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i----------~~Lv~lL~s~~ 127 (429)
..+.+|.||+.|+.. +++.+.+|+++|.+++...++......+.|++ +.+++++.+..
T Consensus 68 ~~g~~p~lv~~l~~~~~~~~~~~~~~~~~~~~~~a~~al~ni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 147 (458)
T 3nmz_A 68 QSGCLPLLIQLLHGNDKDSVLLGNSRGSKEARARASAALHNIIHSQPDDKRGRREIRVLHLLEQIRAYCETCWEWQEAHE 147 (458)
T ss_dssp HHTCHHHHHHHHTCTTCCSCC---CCCCHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred HCCCHHHHHHHHhcccccccccccccCCHHHHHHHHHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhhHHHHHHHHhhc
Confidence 456789999999963 37999999999999999888888888888888 77788887652
Q ss_pred --HH-----HHH-------HHHHHHHHhccCCCchHHHHHhcCccchhhhhccC-----------CCHHHHHHHHHHHHH
Q 014196 128 --IG-----RRR-------AAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDA-----------VDESTRHEFGELLLS 182 (429)
Q Consensus 128 --~~-----~~~-------~A~~aL~nLa~~~~~nk~~iv~~G~i~~Lv~lL~~-----------~~~~~~~~aa~~L~~ 182 (429)
.+ +++ .|+|+|.|++.+. +||..|++.|++++|+.+|.. .+.+.+++|+++|.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~qAv~aL~nls~~~-e~R~~i~~~G~l~~Lv~LL~~~~~~~~~~~~~~~~~l~~~Aa~aL~n 226 (458)
T 3nmz_A 148 PGMDQDKNPMPAPVEHQICPAVCVLMKLSFDE-EHRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTN 226 (458)
T ss_dssp SSSCCCSCC--CCCTTTTHHHHHHHHHHTTSH-HHHHHHHHTTHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHH
T ss_pred cccccccCCccchhhHHHHHHHHHHHHhcCCH-HHHHHHHHCCCHHHHHHHHhhhhcccccccCCCCHHHHHHHHHHHHH
Confidence 22 444 8999999999885 799999999999999999942 125678999999999
Q ss_pred hhccCC-Cccccc-cCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccC--CCChhHHHhcCcHHHHHHhccC-Cc-chHH
Q 014196 183 LSSLAN-THIPLS-SSEILPFLVGILESGSSVETKELCIGALYNLSAV--LDNARPMVSNGVVHTLLKLCSM-KE-RLSE 256 (429)
Q Consensus 183 Ls~~~~-~~~~i~-~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~--~~n~~~iv~~G~v~~Lv~lL~~-~~-~~~~ 256 (429)
|+..++ ++..+. ..|+||.|+++|.+++. +++..|+++|+||+.. ++|+..++++|+||+|+.+|.. .+ .+++
T Consensus 227 La~~~~~~k~~i~~~~GaIp~LV~LL~s~~~-~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI~~LV~lLl~s~~~~v~~ 305 (458)
T 3nmz_A 227 LTFGDVANKATLCSMKGCMRALVAQLKSESE-DLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLK 305 (458)
T ss_dssp HHTTCHHHHHHHHHCHHHHHHHHHGGGCSCH-HHHHHHHHHHHHHTSSCCHHHHHHHHHTTHHHHHHHHHTTCCSHHHHH
T ss_pred HhCCCcccHHHHHHcCCcHHHHHHHHhCCCH-HHHHHHHHHHHHHhcCCCHHHHHHHHHcCCHHHHHHHHhcCCCHHHHH
Confidence 998764 566665 45679999999999887 7999999999999985 4678999999999999997543 34 8899
Q ss_pred HHHHHHHHhhC-ChhcHHHHh-cCCCChHHHHHhcccCCCh----hHHHHHHHHHHHHhh---CCHHHHHHHHhCCchHH
Q 014196 257 KSLATLGNLVV-TSTGKKAME-DSPLVPESLIEILTWEEKP----KCQELSAYILMILAH---QSSEQRDKMAKSGIVHV 327 (429)
Q Consensus 257 ~a~~~L~~La~-~~e~~~~i~-~~~~i~~~Lv~~L~~~~s~----~~~e~A~~~L~~L~~---~~~~~~~~i~~~G~v~~ 327 (429)
.++.+|+||+. +++++..|+ ..|++ +.|+++|. ++++ ..++.|+++|.+|+. .++++++.+++.|++|.
T Consensus 306 ~A~~aL~nLs~~~~~nk~~I~~~~Gal-~~Lv~LL~-~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~~ 383 (458)
T 3nmz_A 306 SVLSALWNLSAHCTENKADICAVDGAL-AFLVGTLT-YRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQT 383 (458)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHSTTHH-HHHHHHTT-CCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHH
T ss_pred HHHHHHHHHccCCHHHHHHHHHhcCcH-HHHHHHhc-CCCCcchHHHHHHHHHHHHHHHhcccCCHHHHHHHHHcccHHH
Confidence 99999999999 888999998 55665 59999998 4443 489999999999997 67899999999999999
Q ss_pred HHHHhhcCCHHHHHHHHHHHHHHHh-ccccCCCCCCCCCcccc----ccCCCCChhhhHHHHHHHHHHHH
Q 014196 328 SLQLALLGSPLAQRRASKLLQWFKD-ERQAKMGPHSGPQTRRV----SIGSPVSPREAQEGKKMMKNLVQ 392 (429)
Q Consensus 328 L~~ll~~~~~~~k~~A~~lL~~l~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~k~~l~~~~~ 392 (429)
|+.++.+++..+++.|+|+|.++.. .++.+.. .-..+.+ .+...++++.++.|..+|.+|..
T Consensus 384 Lv~LL~~~~~~v~~~A~~aL~nLa~~~~~~~~~---i~~~G~I~~Lv~LL~s~~~~v~~~Aa~AL~nL~~ 450 (458)
T 3nmz_A 384 LLQHLKSHSLTIVSNACGTLWNLSARNPKDQEA---LWDMGAVSMLKNLIHSKHKMIAMGSAAALRNLMA 450 (458)
T ss_dssp HHHHSSCSCHHHHHHHHHHHHHHHSSCHHHHHH---HHHHTHHHHHHTTTTCSSHHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCChHHHHHHHHHHHHHHcCCHHHHHH---HHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999983 3321100 0011122 33444577888899999998875
No 10
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=99.97 E-value=1.9e-30 Score=268.92 Aligned_cols=319 Identities=15% Similarity=0.116 Sum_probs=261.2
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHh-hhchHHHHHHHhcCcHHHHHHhhcC-CCHHHHHHHHHHHHHhccCCCchHHH
Q 014196 74 LQKSVKRLHFGSWEEKEMAAKEIEKLA-KEDVKIKKLMAELGVIQMLVSMVST-EVIGRRRAAIKALIQLANGTYTNKAI 151 (429)
Q Consensus 74 l~~lv~~L~~~~~~~~~~Aa~~L~~La-~~~~~~r~~i~~~G~i~~Lv~lL~s-~~~~~~~~A~~aL~nLa~~~~~nk~~ 151 (429)
++.+|+.|.++|.+.|..|+..+|.+. ++.....+.+++.|+||+||.+|++ +++.+|..|+|+|.||+.++++++..
T Consensus 59 i~~~v~~l~s~d~~~q~~a~~~~rklls~e~~ppi~~ii~~G~ip~LV~lL~~~~~~~lq~~Aa~aL~nias~~~e~~~~ 138 (510)
T 3ul1_B 59 VEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKA 138 (510)
T ss_dssp HHHHHHHHTSSCHHHHHHHHHHHHHHHTCSSCCCHHHHHHTTHHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 899999999999999999999999865 4333346889999999999999975 56899999999999999988778999
Q ss_pred HHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccC-CCccccccCCcHHHHHHhhhcCCc----HHHHHHHHHHHHHhc
Q 014196 152 MVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLA-NTHIPLSSSEILPFLVGILESGSS----VETKELCIGALYNLS 226 (429)
Q Consensus 152 iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~-~~~~~i~~~g~i~~Lv~lL~~~~~----~~~~~~A~~aL~nLs 226 (429)
|+++|+||.|+.+|.+++.++++.|+++|++|+.+. .++..+.+.|++++|+.+|...+. ....+.++++|.|++
T Consensus 139 vv~~GaIp~Lv~lL~s~~~~v~e~A~~aL~nLa~d~~~~r~~v~~~G~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~ 218 (510)
T 3ul1_B 139 VVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLC 218 (510)
T ss_dssp HHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTCSSCGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCChHHHHHHHHhccchhhhHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999764 567778899999999999987542 246778999999999
Q ss_pred cCCCChhH-HHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCChh-cHHHHhcCCCChHHHHHhcccCCChhHHHHHHH
Q 014196 227 AVLDNARP-MVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTST-GKKAMEDSPLVPESLIEILTWEEKPKCQELSAY 303 (429)
Q Consensus 227 ~~~~n~~~-iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~e-~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~ 303 (429)
.+..+... ....|++|.|+.+|.+.+ +++..++.+|.+|+..++ ..+.+.+.|++ +.|+++|. +.+...+..++.
T Consensus 219 ~~~~~~~~~~~~~~~lp~L~~LL~~~~~~v~~~A~~aL~~L~~~~~~~~~~i~~~g~i-~~Lv~lL~-~~~~~v~~~al~ 296 (510)
T 3ul1_B 219 RNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVV-PQLVKLLG-ATELPIVTPALR 296 (510)
T ss_dssp CCCSSCCCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCH-HHHHHHHT-CSCHHHHHHHHH
T ss_pred hcccchhHHHHHHhHHHHHHHHHhcCCHHHHHHHHHHHHHHhhchhhhHHHHHhcccc-hhhhhhhc-CCChhhhhHHHH
Confidence 98766644 444689999999998776 899999999999998654 45556665555 59999998 789999999999
Q ss_pred HHHHHhhCCHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHhcc--ccCCCCCCCCCccc-cccCCCCChhhh
Q 014196 304 ILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKDER--QAKMGPHSGPQTRR-VSIGSPVSPREA 380 (429)
Q Consensus 304 ~L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~ 380 (429)
+|++++.+++..+..+++.|+++.|+.++.++++.+++.|+|+|.++.... +.......+ .... +.....++.+.+
T Consensus 297 aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~~~~~~v~~~A~~aL~nl~a~~~~~~~~v~~~g-~i~~Lv~lL~~~~~~v~ 375 (510)
T 3ul1_B 297 AIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHG-LVPFLVGVLSKADFKTQ 375 (510)
T ss_dssp HHHHHTTSCHHHHHHHHHTTGGGGCC-CTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTT-HHHHHHHHHHSSCHHHH
T ss_pred HHHHhhcCCHHHHHHHhhccchHHHHHHhcCCCHHHHHHHHHHHHHHHcCcHHHHHHHHhcC-CHHHHHHHHcCCCHHHH
Confidence 999999999999999999999999999999999999999999999997532 110000000 0000 122234467888
Q ss_pred HHHHHHHHHHHHHHH
Q 014196 381 QEGKKMMKNLVQQSL 395 (429)
Q Consensus 381 ~~~k~~l~~~~~~~~ 395 (429)
.+|-.+|.++...+.
T Consensus 376 ~~Aa~aL~Nl~~~~~ 390 (510)
T 3ul1_B 376 KEAAWAITNYTSGGT 390 (510)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHccCC
Confidence 889999998876443
No 11
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=99.97 E-value=8e-31 Score=258.66 Aligned_cols=243 Identities=22% Similarity=0.197 Sum_probs=213.9
Q ss_pred hHHHHHHHHHHhcC-----------CCHHHHHHHHHHHHHHhhhchHHHHHHHh-cCcHHHHHHhhcCCCHHHHHHHHHH
Q 014196 70 DCVLLQKSVKRLHF-----------GSWEEKEMAAKEIEKLAKEDVKIKKLMAE-LGVIQMLVSMVSTEVIGRRRAAIKA 137 (429)
Q Consensus 70 ~~~~l~~lv~~L~~-----------~~~~~~~~Aa~~L~~La~~~~~~r~~i~~-~G~i~~Lv~lL~s~~~~~~~~A~~a 137 (429)
+.++++.|+..|.. .++..|..|+++|++++..++.+|..+.. .|+||+||.+|+++++++++.|+++
T Consensus 71 ~~G~l~~Lv~LL~~~~~~~~~~~~~~~~~~q~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~LV~LL~s~~~~v~~~A~~a 150 (354)
T 3nmw_A 71 ELGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASV 150 (354)
T ss_dssp HTTHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHH
T ss_pred HcCCHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCcHHHHHHHHCCCCHHHHHHHHHH
Confidence 45678999999852 24678999999999999988889988875 5669999999999999999999999
Q ss_pred HHHhccC-CCchHHHHHhcCccchhhhhc-cCCCHHHHHHHHHHHHHhhc-cCCCccccc-cCCcHHHHHHhhhcCCcH-
Q 014196 138 LIQLANG-TYTNKAIMVEAGILTKLPKNV-DAVDESTRHEFGELLLSLSS-LANTHIPLS-SSEILPFLVGILESGSSV- 212 (429)
Q Consensus 138 L~nLa~~-~~~nk~~iv~~G~i~~Lv~lL-~~~~~~~~~~aa~~L~~Ls~-~~~~~~~i~-~~g~i~~Lv~lL~~~~~~- 212 (429)
|.||+.+ ++.||..|++.|+||+|+.+| .+.+.+.++.++.+|++|+. .++++..|. ..|+||.|+++|.+++..
T Consensus 151 L~nLs~~~~~~~k~~i~~~G~Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~~nk~~i~~~~Gai~~Lv~lL~~~~~~~ 230 (354)
T 3nmw_A 151 LRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTN 230 (354)
T ss_dssp HHHHHTTCCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHSTTHHHHHHHHTTCCCSSS
T ss_pred HHHHhccCCHHHHHHHHHCCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHccChhhhHHHHHhcCcHHHHHHHhccCCCcc
Confidence 9999986 446899999999999999975 56778899999999999998 557888888 799999999999987542
Q ss_pred --HHHHHHHHHHHHhcc----CCCChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhC-ChhcHHHHhcCCCChHH
Q 014196 213 --ETKELCIGALYNLSA----VLDNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVV-TSTGKKAMEDSPLVPES 284 (429)
Q Consensus 213 --~~~~~A~~aL~nLs~----~~~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~-~~e~~~~i~~~~~i~~~ 284 (429)
++++.|+++|+||+. .++++..++++|++|+|+.+|.+.+ .+++.|+.+|.||+. +++.++.+.+.|+++ .
T Consensus 231 ~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~i~-~ 309 (354)
T 3nmw_A 231 TLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVS-M 309 (354)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTHHH-H
T ss_pred cHHHHHHHHHHHHHHHhhccCCHHHHHHHHHcCCHHHHHHHHcCCChHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHH-H
Confidence 488999999999996 7788899999999999999999776 899999999999995 799999999988876 8
Q ss_pred HHHhcccCCChhHHHHHHHHHHHHhhCCHH
Q 014196 285 LIEILTWEEKPKCQELSAYILMILAHQSSE 314 (429)
Q Consensus 285 Lv~~L~~~~s~~~~e~A~~~L~~L~~~~~~ 314 (429)
|+++|. ++++..++.|+++|.+|+.+.+.
T Consensus 310 Lv~LL~-s~~~~i~~~A~~aL~nL~~~~~~ 338 (354)
T 3nmw_A 310 LKNLIH-SKHKMIAMGSAAALRNLMANRPA 338 (354)
T ss_dssp HHTTTT-CSSHHHHHHHHHHHHHHHTTCCG
T ss_pred HHHHHh-CCCHHHHHHHHHHHHHHHcCCHH
Confidence 999998 78999999999999999987543
No 12
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=99.97 E-value=3.3e-29 Score=260.18 Aligned_cols=278 Identities=17% Similarity=0.121 Sum_probs=226.7
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhh-chHHHHHHHhcCcHHHHHHhhcC-CCHHHHHHHHHHHHHhccCCCc
Q 014196 70 DCVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKE-DVKIKKLMAELGVIQMLVSMVST-EVIGRRRAAIKALIQLANGTYT 147 (429)
Q Consensus 70 ~~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~-~~~~r~~i~~~G~i~~Lv~lL~s-~~~~~~~~A~~aL~nLa~~~~~ 147 (429)
+.+.|+.||+.|.+++.+.|..|+.+|++|+.+ ++++|..|+++|+||+||.+|.+ .+.++++.|+++|+||+.++ .
T Consensus 88 ~~G~Ip~LV~LL~s~~~~vq~~Aa~AL~nLa~~~~~~nk~~I~~~GaIp~LV~LL~s~~~~~~~e~aa~aL~nLS~~~-~ 166 (584)
T 3l6x_A 88 KLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHD-S 166 (584)
T ss_dssp HTTHHHHHHHGGGCSSHHHHHHHHHHHHHHTSSSCHHHHHHHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTTSG-G
T ss_pred HcCCcHHHHHHHCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCc-h
Confidence 456899999999999999999999999999985 68999999999999999999997 67899999999999999976 7
Q ss_pred hHHHHHhcCccchhhhhcc------------------CCCHHHHHHHHHHHHHhhccCC-Ccccccc-CCcHHHHHHhhh
Q 014196 148 NKAIMVEAGILTKLPKNVD------------------AVDESTRHEFGELLLSLSSLAN-THIPLSS-SEILPFLVGILE 207 (429)
Q Consensus 148 nk~~iv~~G~i~~Lv~lL~------------------~~~~~~~~~aa~~L~~Ls~~~~-~~~~i~~-~g~i~~Lv~lL~ 207 (429)
||..|++ |+||+|+.++. ..+.+++++|+++|.|||..++ ++..|.+ .|+++.||.+|+
T Consensus 167 ~k~~I~~-~alp~Lv~LL~~p~sg~~~~~~~~~k~~~~~d~~V~~nAa~~L~NLs~~~~~~R~~i~~~~Gli~~LV~~L~ 245 (584)
T 3l6x_A 167 IKMEIVD-HALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQ 245 (584)
T ss_dssp GHHHHHH-HTHHHHHHHTHHHHHCCC----------CCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHSTTHHHHHHHHHH
T ss_pred hhHHHHh-ccHHHHHHHHhcccccccccccccccccccccHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCcHHHHHHHHH
Confidence 9999996 57999999872 1235778889999999987653 3555554 455566666654
Q ss_pred c-------------------------------------------------------------------------CCcHHH
Q 014196 208 S-------------------------------------------------------------------------GSSVET 214 (429)
Q Consensus 208 ~-------------------------------------------------------------------------~~~~~~ 214 (429)
+ +....+
T Consensus 246 ~~~~~~~~~~~~~enav~aL~NLs~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~Gve~L~~~~~v~~Ll~LL~~s~~~~v 325 (584)
T 3l6x_A 246 AEIGQKDSDSKLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTGTSPARGYELLFQPEVVRIYISLLKESKTPAI 325 (584)
T ss_dssp HHHHTTCCSCHHHHHHHHHHHHHHTTHHHHSTTCCC--------------CCCCGGGGGGSHHHHHHHHHHHHHCCCHHH
T ss_pred HhhcccCccHHHHHHHHHHHHHhhccccccccchhhhhhhcccccccccccCchhHHHHhcccHHHHHHHHHccCCCHHH
Confidence 2 212244
Q ss_pred HHHHHHHHHHhccCCC-----ChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCChhcHHHHhcCCCChHHHHHh
Q 014196 215 KELCIGALYNLSAVLD-----NARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEI 288 (429)
Q Consensus 215 ~~~A~~aL~nLs~~~~-----n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~e~~~~i~~~~~i~~~Lv~~ 288 (429)
+++|++||.|||.... ++..+.+.|++|.|+.||...+ .+++.|+.+|.||+.++..+..| ..|+++ .||++
T Consensus 326 ~E~Aa~AL~nL~ag~~~~~~~~~~~v~~~~glp~Lv~LL~s~~~~v~~~A~~aL~nLs~~~~~~~~I-~~g~ip-~LV~L 403 (584)
T 3l6x_A 326 LEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDARNKELI-GKHAIP-NLVKN 403 (584)
T ss_dssp HHHHHHHHHHHHSSCSHHHHHHHHHHTSHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCSCHHHH-HHHHHH-HHHHT
T ss_pred HHHHHHHHHHHHcCCccccHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHhCChhHHHHH-HhCCHH-HHHHH
Confidence 5566666666655431 2224455799999999998775 99999999999999998888877 447665 89999
Q ss_pred cccCC--------ChhHHHHHHHHHHHHhhCCHHHHHHHHhCCchHHHHHHhhcC--CHHHHHHHHHHHHHHHh
Q 014196 289 LTWEE--------KPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLG--SPLAQRRASKLLQWFKD 352 (429)
Q Consensus 289 L~~~~--------s~~~~e~A~~~L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~~--~~~~k~~A~~lL~~l~~ 352 (429)
|. ++ +......|+++|.+|+..++++++.+++.|++|.|+.++.++ ++.+++.|+|+|.++..
T Consensus 404 L~-~~~~~~~~~~s~~v~~~a~~tL~NL~a~~~~~~~~I~~~g~I~~Lv~LL~s~~~~~~v~k~Aa~vL~nl~~ 476 (584)
T 3l6x_A 404 LP-GGQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWG 476 (584)
T ss_dssp SS-SSSCSGGGTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHTCSSSCHHHHHHHHHHHHHHHT
T ss_pred hc-CCcccccccchHHHHHHHHHHHHHHhcCCHHHHHHHHHCCChHHHHHHHhCCCCChHHHHHHHHHHHHHHc
Confidence 98 44 356788999999999999999999999999999999999987 89999999999998864
No 13
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=99.97 E-value=6.7e-29 Score=258.36 Aligned_cols=319 Identities=15% Similarity=0.114 Sum_probs=262.3
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHh-hhchHHHHHHHhcCcHHHHHHhhcC-CCHHHHHHHHHHHHHhccCCCchHH
Q 014196 73 LLQKSVKRLHFGSWEEKEMAAKEIEKLA-KEDVKIKKLMAELGVIQMLVSMVST-EVIGRRRAAIKALIQLANGTYTNKA 150 (429)
Q Consensus 73 ~l~~lv~~L~~~~~~~~~~Aa~~L~~La-~~~~~~r~~i~~~G~i~~Lv~lL~s-~~~~~~~~A~~aL~nLa~~~~~nk~ 150 (429)
.++.+++.+.+++++.+..|+..+|.+. ++.....+.+++.|+||.||.+|.. +++.+|..|+|+|.||+.++..++.
T Consensus 77 ~l~~lv~~l~s~d~~~q~~a~~~~rklLs~~~~~~i~~ii~~G~ip~Lv~lL~~~~~~~~q~~Aa~aL~nia~~~~~~~~ 156 (529)
T 3tpo_A 77 SVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTK 156 (529)
T ss_dssp CHHHHHHHHTSSCHHHHHHHHHHHHHHHTSSSCCCHHHHHHTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCchHHHHHHCCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCHHHHH
Confidence 4889999999999999999999999864 4443457889999999999999975 5689999999999999998866788
Q ss_pred HHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccC-CCccccccCCcHHHHHHhhhcCCc----HHHHHHHHHHHHHh
Q 014196 151 IMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLA-NTHIPLSSSEILPFLVGILESGSS----VETKELCIGALYNL 225 (429)
Q Consensus 151 ~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~-~~~~~i~~~g~i~~Lv~lL~~~~~----~~~~~~A~~aL~nL 225 (429)
.++++|+||.|+.++.+++.+.++.|+++|++|+.+. .++..+.+.|++++|+.+|...+. ....+.++++|.|+
T Consensus 157 ~vv~~Gaip~Lv~LL~s~~~~v~e~A~~aL~nLa~~~~~~r~~i~~~g~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl 236 (529)
T 3tpo_A 157 AVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGAGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNL 236 (529)
T ss_dssp HHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHTTCSSCGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhccCHHHHHHHHHcCCcHHHHHHHhccchhHhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999764 677888899999999999986542 24677899999999
Q ss_pred ccCCCChhH-HHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCCh-hcHHHHhcCCCChHHHHHhcccCCChhHHHHHH
Q 014196 226 SAVLDNARP-MVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTS-TGKKAMEDSPLVPESLIEILTWEEKPKCQELSA 302 (429)
Q Consensus 226 s~~~~n~~~-iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~-e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~ 302 (429)
+.+..+... ....|++|.|+.+|.+.+ +++..++.+|.+++..+ +..+.+...|++ +.|+++|. +.++..+..|+
T Consensus 237 ~~~~~~~~~~~~~~~~lp~L~~LL~~~~~~v~~~a~~aL~~l~~~~~~~~~~v~~~g~i-~~Lv~lL~-~~~~~v~~~a~ 314 (529)
T 3tpo_A 237 CRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVV-PQLVKLLG-ATELPIVTPAL 314 (529)
T ss_dssp HCCCTTCCCHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHHHTTTCH-HHHHHHHT-CSCHHHHHHHH
T ss_pred HhcccchhhHHHHhhHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhhhhhHHHHHhccch-HHHHHHhc-CCChhHHHHHH
Confidence 998766543 445789999999998776 89999999999999865 445566665555 59999998 78999999999
Q ss_pred HHHHHHhhCCHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHhccc--cCCCCCCCCCccc-cccCCCCChhh
Q 014196 303 YILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKDERQ--AKMGPHSGPQTRR-VSIGSPVSPRE 379 (429)
Q Consensus 303 ~~L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~ 379 (429)
.+|++++.+++.....+++.|+++.|+.++.++++.+++.|+|+|.++..... .......+ .... +.+...++.+.
T Consensus 315 ~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~~~~~~i~~~a~~aL~nl~~~~~~~~~~v~~~g-~i~~Lv~lL~~~~~~v 393 (529)
T 3tpo_A 315 RAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHG-LVPFLVGVLSKADFKT 393 (529)
T ss_dssp HHHHHHTTSCHHHHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTT-HHHHHHHHHHSSCHHH
T ss_pred HHHHHHHccchHHHHHHhhcccHHHHHHHHcCCCHHHHHHHHHHHHHHhcccHHHHHHHHhcC-cHHHHHHHhcCCCHHH
Confidence 99999999989999999999999999999999999999999999999986321 10000000 0000 12223446778
Q ss_pred hHHHHHHHHHHHHHH
Q 014196 380 AQEGKKMMKNLVQQS 394 (429)
Q Consensus 380 ~~~~k~~l~~~~~~~ 394 (429)
+..|-.+|.++...+
T Consensus 394 ~~~A~~aL~nl~~~~ 408 (529)
T 3tpo_A 394 QKAAAWAITNYTSGG 408 (529)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHcCC
Confidence 888888998887644
No 14
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=99.96 E-value=4.1e-28 Score=251.81 Aligned_cols=319 Identities=16% Similarity=0.160 Sum_probs=271.4
Q ss_pred HHHHHHHHHHhcCCC-HHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchH
Q 014196 71 CVLLQKSVKRLHFGS-WEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNK 149 (429)
Q Consensus 71 ~~~l~~lv~~L~~~~-~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk 149 (429)
.+.++.|++.|.+++ +..+..|++.|.+++..+++++..+++.|++|+|+.+|.++++.+++.|+++|.||+.+++.++
T Consensus 116 ~g~v~~Lv~lL~~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~ 195 (528)
T 4b8j_A 116 SGVVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSPKCR 195 (528)
T ss_dssp TTCHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHTCHHHH
T ss_pred CCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCChhhH
Confidence 457899999999886 9999999999999999888999999999999999999999999999999999999998876678
Q ss_pred HHHHhcCccchhhhhc-cCCCHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccC
Q 014196 150 AIMVEAGILTKLPKNV-DAVDESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAV 228 (429)
Q Consensus 150 ~~iv~~G~i~~Lv~lL-~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~ 228 (429)
..+++.|++++|+.++ ...+...+..++++|.+|+............|++|.|+++|.+++. .++..|+++|.+|+..
T Consensus 196 ~~i~~~g~l~~Ll~lL~~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~l~~L~~lL~~~~~-~v~~~a~~aL~~l~~~ 274 (528)
T 4b8j_A 196 DLVLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQTRPALPALARLIHSNDE-EVLTDACWALSYLSDG 274 (528)
T ss_dssp HHHHHTTCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCSSSCCCHHHHTTHHHHHHHHTTCCCH-HHHHHHHHHHHHHTSS
T ss_pred HHHHHCCcHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHHHcC
Confidence 9999999999999999 5667889999999999999775444444568999999999999887 7999999999999987
Q ss_pred CCCh-hHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhC-ChhcHHHHhcCCCChHHHHHhcccCC-ChhHHHHHHHH
Q 014196 229 LDNA-RPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVV-TSTGKKAMEDSPLVPESLIEILTWEE-KPKCQELSAYI 304 (429)
Q Consensus 229 ~~n~-~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~-~~e~~~~i~~~~~i~~~Lv~~L~~~~-s~~~~e~A~~~ 304 (429)
..+. ..+++.|+++.|+.+|.+++ .+++.|+.+|.+|+. +++.++.+.+.|+++ .|+++|. ++ ++..+..|+++
T Consensus 275 ~~~~~~~~~~~g~v~~Lv~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~~~l~-~L~~lL~-~~~~~~v~~~A~~~ 352 (528)
T 4b8j_A 275 TNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQALP-CLLSLLT-QNLKKSIKKEACWT 352 (528)
T ss_dssp CHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHH-HHHHHHH-SCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHcCHHHHHHHHHcCCChhHHHHHHHHHHHHHcCCHHHHHHHHHhhhHH-HHHHHHc-CCCcHHHHHHHHHH
Confidence 6655 67888999999999999876 899999999999998 577778888877665 9999998 67 89999999999
Q ss_pred HHHHhhCCHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHhcc--c-cC-C-CCCCCCCcccc-ccCCCCChh
Q 014196 305 LMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKDER--Q-AK-M-GPHSGPQTRRV-SIGSPVSPR 378 (429)
Q Consensus 305 L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~~~--~-~~-~-~~~~~~~~~~~-~~~~~~~~~ 378 (429)
|.+++.++++..+.+++.|++|.|+.++.++++.+++.|+|+|.++.... . .. . .... ...+ .+....+.+
T Consensus 353 L~nl~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~aL~nl~~~~~~~~~~~l~~~~~---i~~L~~lL~~~d~~ 429 (528)
T 4b8j_A 353 ISNITAGNKDQIQAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGC---IKPLCDLLICPDIR 429 (528)
T ss_dssp HHHHHTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTC---HHHHHHGGGCSCHH
T ss_pred HHHHHCCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCC---HHHHHHHHcCCCHH
Confidence 99999988888899999999999999999999999999999999998652 1 00 0 0000 1111 222334667
Q ss_pred hhHHHHHHHHHHHHHHH
Q 014196 379 EAQEGKKMMKNLVQQSL 395 (429)
Q Consensus 379 ~~~~~k~~l~~~~~~~~ 395 (429)
....+-.+|.+|++..-
T Consensus 430 v~~~al~~L~~l~~~~~ 446 (528)
T 4b8j_A 430 IVTVCLEGLENILKVGE 446 (528)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 78888889999987543
No 15
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=99.96 E-value=2.3e-27 Score=246.21 Aligned_cols=317 Identities=12% Similarity=0.074 Sum_probs=264.8
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhch-HHHHHHHhcCcHHHHHHhhcCCC-HHHHHHHHHHHHHhccCCCchH
Q 014196 72 VLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDV-KIKKLMAELGVIQMLVSMVSTEV-IGRRRAAIKALIQLANGTYTNK 149 (429)
Q Consensus 72 ~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~-~~r~~i~~~G~i~~Lv~lL~s~~-~~~~~~A~~aL~nLa~~~~~nk 149 (429)
..++.++..|.+++++.+..|+..|+.++.... ..+..+++.|++|.|+.+|.+++ +.++..|+++|.+++.++++++
T Consensus 74 ~~l~~lv~~L~s~~~~~~~~A~~~L~~l~s~~~~~~~~~~~~~g~v~~Lv~lL~~~~~~~v~~~A~~~L~~l~~~~~~~~ 153 (528)
T 4b8j_A 74 ESLPAMIGGVYSDDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENT 153 (528)
T ss_dssp -CHHHHHHHHTSSCHHHHHHHHHHHHHHHTCSSSCCHHHHHHTTCHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHH
Confidence 458999999999999999999999999976443 67888999999999999999987 9999999999999999876789
Q ss_pred HHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccC-CCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccC
Q 014196 150 AIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLA-NTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAV 228 (429)
Q Consensus 150 ~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~-~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~ 228 (429)
..+++.|++|.|+.+|.+.+.++++.|+++|.+|+... .++..+...|++++|+.+|.......++..|+++|.||+..
T Consensus 154 ~~~~~~g~i~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~i~~~g~l~~Ll~lL~~~~~~~v~~~a~~~L~~L~~~ 233 (528)
T 4b8j_A 154 KVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSPKCRDLVLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRG 233 (528)
T ss_dssp HHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHTTCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCS
T ss_pred HHHHhCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCChhhHHHHHHCCcHHHHHHHHhcCCCHHHHHHHHHHHHHHHcC
Confidence 99999999999999999988999999999999999764 45677778999999999995443347999999999999998
Q ss_pred CCChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCChhc-HHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHH
Q 014196 229 LDNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTSTG-KKAMEDSPLVPESLIEILTWEEKPKCQELSAYILM 306 (429)
Q Consensus 229 ~~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~e~-~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~ 306 (429)
..+.......|++|.|+.+|.+.+ .++..++.+|.+|+..++. .+.+.+.|++ +.|+++|. ++++..++.|+.+|.
T Consensus 234 ~~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~v-~~Lv~lL~-~~~~~v~~~a~~~L~ 311 (528)
T 4b8j_A 234 KPQPSFEQTRPALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVC-PRLVELLL-HPSPSVLIPALRTVG 311 (528)
T ss_dssp SSCCCHHHHTTHHHHHHHHTTCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTCH-HHHHHHTT-CSCHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCHH-HHHHHHHc-CCChhHHHHHHHHHH
Confidence 666666677999999999998776 8999999999999986544 4677776666 59999998 788999999999999
Q ss_pred HHhhCCHHHHHHHHhCCchHHHHHHhhcC-CHHHHHHHHHHHHHHHhccc--cC--CCCCCCCCcccc-ccCCCCChhhh
Q 014196 307 ILAHQSSEQRDKMAKSGIVHVSLQLALLG-SPLAQRRASKLLQWFKDERQ--AK--MGPHSGPQTRRV-SIGSPVSPREA 380 (429)
Q Consensus 307 ~L~~~~~~~~~~i~~~G~v~~L~~ll~~~-~~~~k~~A~~lL~~l~~~~~--~~--~~~~~~~~~~~~-~~~~~~~~~~~ 380 (429)
+++.+++...+.+++.|++|.|+.++.++ ++.+++.|+|+|.++..... .. ..... ...+ .+...++.+.+
T Consensus 312 nl~~~~~~~~~~~~~~~~l~~L~~lL~~~~~~~v~~~A~~~L~nl~~~~~~~~~~~~~~~~---i~~L~~lL~~~~~~v~ 388 (528)
T 4b8j_A 312 NIVTGDDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAGNKDQIQAVINAGI---IGPLVNLLQTAEFDIK 388 (528)
T ss_dssp HHTTSCHHHHHHHHTTTHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTC---HHHHHHHHHHSCHHHH
T ss_pred HHHcCCHHHHHHHHHhhhHHHHHHHHcCCCcHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC---HHHHHHHHhcCCHHHH
Confidence 99998888999999999999999999998 99999999999999985321 00 00000 1111 11122367788
Q ss_pred HHHHHHHHHHHHH
Q 014196 381 QEGKKMMKNLVQQ 393 (429)
Q Consensus 381 ~~~k~~l~~~~~~ 393 (429)
..+-.+|.++...
T Consensus 389 ~~a~~aL~nl~~~ 401 (528)
T 4b8j_A 389 KEAAWAISNATSG 401 (528)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC
Confidence 8888888888875
No 16
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=99.96 E-value=2.3e-28 Score=261.77 Aligned_cols=280 Identities=14% Similarity=0.111 Sum_probs=246.2
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHH
Q 014196 71 CVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKA 150 (429)
Q Consensus 71 ~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~ 150 (429)
.+.++.||..|.++++..|..|+++|.+++. ++++|..+++.|++|+|+.+|.++++..++.|+++|.||+.+.+ ...
T Consensus 494 aGaVp~LV~LL~s~s~~vqe~Aa~aL~NLA~-d~~~r~~Vv~~Gaip~Lv~LL~s~~~~~k~~Aa~AL~nL~~~~~-p~~ 571 (810)
T 3now_A 494 EGITTALCALAKTESHNSQELIARVLNAVCG-LKELRGKVVQEGGVKALLRMALEGTEKGKRHATQALARIGITIN-PEV 571 (810)
T ss_dssp TTHHHHHHHHHTCCCHHHHHHHHHHHHHHHT-SHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSC-HHH
T ss_pred CcCHHHHHHHHcCCCHHHHHHHHHHHHHHcC-CHHHHHHHHHCCCHHHHHHHHccCCHHHHHHHHHHHHHHhcCCC-hhh
Confidence 3678999999999999999999999999996 56799999999999999999999999999999999999998652 222
Q ss_pred HH---HhcCccchhhhhccCCC-HHHHHHHHHHHHHhhccC-CCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHh
Q 014196 151 IM---VEAGILTKLPKNVDAVD-ESTRHEFGELLLSLSSLA-NTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNL 225 (429)
Q Consensus 151 ~i---v~~G~i~~Lv~lL~~~~-~~~~~~aa~~L~~Ls~~~-~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nL 225 (429)
.+ ...|+||+|+.+|.+.. ...+.+|+.+|.||+..+ +++..|.+.|++|.|+.+|.+++. .+++.|+++|+||
T Consensus 572 ~~~~~~~~~aIppLv~LL~~~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~s~~~-~Vq~~A~~~L~NL 650 (810)
T 3now_A 572 SFSGQRSLDVIRPLLNLLQQDCTALENFESLMALTNLASMNESVRQRIIKEQGVSKIEYYLMEDHL-YLTRAAAQCLCNL 650 (810)
T ss_dssp HTTTHHHHHTHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSCCT-THHHHHHHHHHHH
T ss_pred hhcchhhhcHHHHHHHHhCCCCcHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCH-HHHHHHHHHHHHH
Confidence 21 12469999999998543 344567999999999874 667788899999999999999887 7999999999999
Q ss_pred ccCCCChhHHHh-cCcHHHHHHhccCCc-chHHHHHHHHHHhhC-ChhcHHHHhc-CCCChHHHHHhcccCCChhHHHHH
Q 014196 226 SAVLDNARPMVS-NGVVHTLLKLCSMKE-RLSEKSLATLGNLVV-TSTGKKAMED-SPLVPESLIEILTWEEKPKCQELS 301 (429)
Q Consensus 226 s~~~~n~~~iv~-~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~-~~e~~~~i~~-~~~i~~~Lv~~L~~~~s~~~~e~A 301 (429)
+.+++.+..+++ .|+++.|+.++...+ .+++.|+.+|.+|+. +++..+.+++ .|++ +.|+++|. +++...+..|
T Consensus 651 a~~~~~~~~~v~~~g~l~~Lv~LL~s~d~~vq~~Aa~ALanLt~~s~~~~~~ii~~~g~I-~~Lv~LL~-s~d~~vq~~A 728 (810)
T 3now_A 651 VMSEDVIKMFEGNNDRVKFLALLCEDEDEETATACAGALAIITSVSVKCCEKILAIASWL-DILHTLIA-NPSPAVQHRG 728 (810)
T ss_dssp TTSHHHHHHHHSSSSHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHCHHHHHHHHTSTTHH-HHHHHHHT-CSSHHHHHHH
T ss_pred hCChHHHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCH-HHHHHHHC-CCCHHHHHHH
Confidence 999888888886 799999999998776 899999999999998 7888889988 6666 58999999 8999999999
Q ss_pred HHHHHHHhhCCHHHHHHHHhCCchHHHHHHhhcC---CHHHHHHHHHHHHHHHhccc
Q 014196 302 AYILMILAHQSSEQRDKMAKSGIVHVSLQLALLG---SPLAQRRASKLLQWFKDERQ 355 (429)
Q Consensus 302 ~~~L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~~---~~~~k~~A~~lL~~l~~~~~ 355 (429)
+++|.+++.++++++..+++.|++++|+.+++.. +.++.+.|...|+.+-+.+.
T Consensus 729 ~~aL~NL~~~s~e~~~~l~e~G~i~~L~~LL~~~d~~~~~i~e~Al~aL~~ll~~g~ 785 (810)
T 3now_A 729 IVIILNMINAGEEIAKKLFETDIMELLSGLGQLPDDTRAKAREVATQCLAAAERYRI 785 (810)
T ss_dssp HHHHHHHHTTCHHHHHHHHTSTHHHHHTTSCCCTTSTTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHhCcccCcHHHHHHHHHHHHHHHhCCC
Confidence 9999999988888999999999999999999754 68899999999999998765
No 17
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=99.96 E-value=4.7e-27 Score=244.12 Aligned_cols=321 Identities=12% Similarity=0.097 Sum_probs=270.2
Q ss_pred HHHHHHHHHHhcCC-CHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchH
Q 014196 71 CVLLQKSVKRLHFG-SWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNK 149 (429)
Q Consensus 71 ~~~l~~lv~~L~~~-~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk 149 (429)
.+.++.|+..|.++ ++..+..|++.|.+++..+++++..+++.|++|.|+.+|.++++.+++.|+++|.+|+.+++.++
T Consensus 129 ~g~i~~Lv~~L~~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~vr~~A~~aL~~l~~~~~~~~ 208 (530)
T 1wa5_B 129 AGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYR 208 (530)
T ss_dssp TTCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCccch
Confidence 45689999999987 89999999999999999888899999999999999999999999999999999999999876688
Q ss_pred HHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccC-CCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccC
Q 014196 150 AIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLA-NTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAV 228 (429)
Q Consensus 150 ~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~-~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~ 228 (429)
..+++.|+++.|+.++...+.+++..++++|.+|+... .........|++|.|+.+|.+++. .++..|+++|.+|+..
T Consensus 209 ~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~l~~L~~lL~~~d~-~v~~~a~~~L~~L~~~ 287 (530)
T 1wa5_B 209 DYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDT-ETLVDACWAISYLSDG 287 (530)
T ss_dssp HHHHHTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSCCCHHHHGGGHHHHHHHTTCCCH-HHHHHHHHHHHHHHSS
T ss_pred HHHHHcCcHHHHHHHhccCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHhHHHHHHHHHcCCCH-HHHHHHHHHHHHHhCC
Confidence 99999999999999999888899999999999999765 444444568999999999999886 7999999999999976
Q ss_pred C-CChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhC-ChhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHH
Q 014196 229 L-DNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVV-TSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYIL 305 (429)
Q Consensus 229 ~-~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~-~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L 305 (429)
. +....+++.|+++.|+.+|.+.+ .+++.|+.+|.+++. +++..+.+.+.|++ +.|+++|. ++++..++.|+++|
T Consensus 288 ~~~~~~~~~~~~~v~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l-~~L~~lL~-~~~~~vr~~A~~aL 365 (530)
T 1wa5_B 288 PQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVL-PALRLLLS-SPKENIKKEACWTI 365 (530)
T ss_dssp CHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHH-HHHHHHTT-CSCHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCcHHHHHHHHCCCChhhHHHHHHHHHHHHcCCHHHHHHHHHcchH-HHHHHHHc-CCCHHHHHHHHHHH
Confidence 4 45677888999999999999776 899999999999997 56777778887666 49999998 77889999999999
Q ss_pred HHHhhCCHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHhccccCCCCCCCC--Ccccc----ccCCCCChhh
Q 014196 306 MILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKDERQAKMGPHSGP--QTRRV----SIGSPVSPRE 379 (429)
Q Consensus 306 ~~L~~~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~ 379 (429)
.+++.++++..+.+++.|++|.|+.++.++++.++..|+|+|.++...... .+.+... ..+.+ .+....+.+.
T Consensus 366 ~~l~~~~~~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~-~~~~~~~l~~~~~l~~L~~ll~~~~~~v 444 (530)
T 1wa5_B 366 SNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNASSGGLQ-RPDIIRYLVSQGCIKPLCDLLEIADNRI 444 (530)
T ss_dssp HHHTTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTT-CTHHHHHHHHTTCHHHHHHHTTTCCHHH
T ss_pred HHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCCC-cHHHHHHHHHCCCHHHHHHHHhCCCHHH
Confidence 999988888888899999999999999999999999999999999763210 0000000 00111 2223336777
Q ss_pred hHHHHHHHHHHHHHHH
Q 014196 380 AQEGKKMMKNLVQQSL 395 (429)
Q Consensus 380 ~~~~k~~l~~~~~~~~ 395 (429)
+..+-.+|.++++.+-
T Consensus 445 ~~~al~aL~~l~~~~~ 460 (530)
T 1wa5_B 445 IEVTLDALENILKMGE 460 (530)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhh
Confidence 8888889999988654
No 18
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=99.95 E-value=1.8e-26 Score=233.38 Aligned_cols=319 Identities=14% Similarity=0.144 Sum_probs=265.7
Q ss_pred HHHHHHHHHhcCC-CHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHH
Q 014196 72 VLLQKSVKRLHFG-SWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKA 150 (429)
Q Consensus 72 ~~l~~lv~~L~~~-~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~ 150 (429)
+.++.+++.|.++ ++..+..|+..|.+++..+++++..+++.|++|.|+.+|.++++.+++.|+++|.+++.+++.++.
T Consensus 64 ~~i~~L~~~L~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~vr~~a~~~L~~l~~~~~~~~~ 143 (450)
T 2jdq_A 64 GVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRD 143 (450)
T ss_dssp THHHHHHHHHTCTTCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CcHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhCCCHHHHHHHHcCCCHHHHHHHHHHHHHHccCCHHHHH
Confidence 6799999999988 899999999999999998888888899999999999999999999999999999999998766788
Q ss_pred HHHhcCccchhhhhccC-CCHHHHHHHHHHHHHhhccC--CCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhcc
Q 014196 151 IMVEAGILTKLPKNVDA-VDESTRHEFGELLLSLSSLA--NTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSA 227 (429)
Q Consensus 151 ~iv~~G~i~~Lv~lL~~-~~~~~~~~aa~~L~~Ls~~~--~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~ 227 (429)
.+++.|+++.|+.++.. .+.+.+..++.+|.+|+... ..+..+ ..+++|.|++++.+++. .++..++++|.+|+.
T Consensus 144 ~~~~~~~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~-~~~~l~~L~~~l~~~~~-~v~~~a~~~L~~l~~ 221 (450)
T 2jdq_A 144 YVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAK-VSPCLNVLSWLLFVSDT-DVLADACWALSYLSD 221 (450)
T ss_dssp HHHHTTCHHHHHHHTTSCCCHHHHHHHHHHHHHHHCCSSSCCCGGG-TGGGHHHHHHHTTCCCH-HHHHHHHHHHHHHTS
T ss_pred HHHHCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCCCCCCHHH-HHHHHHHHHHHHccCCH-HHHHHHHHHHHHHHC
Confidence 99999999999999985 67889999999999999664 222233 37899999999998887 799999999999998
Q ss_pred CC-CChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCC-hhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHH
Q 014196 228 VL-DNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVT-STGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYI 304 (429)
Q Consensus 228 ~~-~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~-~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~ 304 (429)
+. ++...+++.|+++.|+.+|.+.+ .+++.|+.+|.+++.. ++.++.+.+.|++ +.|+++|. ++++..++.|+++
T Consensus 222 ~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l-~~L~~ll~-~~~~~vr~~a~~~ 299 (450)
T 2jdq_A 222 GPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNCSAL-QSLLHLLS-SPKESIKKEACWT 299 (450)
T ss_dssp SSHHHHHHHHHTTTHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHH-HHHHHHTT-CSSHHHHHHHHHH
T ss_pred CCcHHHHHHHHcCcHHHHHHHHCCCchhHHHHHHHHHHHHhhCChHHHHHHHHCccH-HHHHHHHc-CCCHHHHHHHHHH
Confidence 64 45677888999999999998776 8999999999999985 5556667776665 59999998 7889999999999
Q ss_pred HHHHhhCCHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHhc--c-ccCCCCCCCCCcccc-ccCCCCChhhh
Q 014196 305 LMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKDE--R-QAKMGPHSGPQTRRV-SIGSPVSPREA 380 (429)
Q Consensus 305 L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~~--~-~~~~~~~~~~~~~~~-~~~~~~~~~~~ 380 (429)
|.+++.++++..+.+++.|++|.|+.++.++++.+|..|+|+|.++... + +.+.-.+. .....+ .+....+.+.+
T Consensus 300 L~~l~~~~~~~~~~~~~~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~l~~~-~~i~~L~~ll~~~~~~v~ 378 (450)
T 2jdq_A 300 ISNITAGNRAQIQTVIDANIFPALISILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVEL-GCIKPLCDLLTVMDSKIV 378 (450)
T ss_dssp HHHHTTSCHHHHHHHHHTTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH-TCHHHHHHGGGSSCHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHC-CCHHHHHHHhcCCCHHHH
Confidence 9999988888888899999999999999999999999999999999753 1 11000000 001111 22223367788
Q ss_pred HHHHHHHHHHHHHHH
Q 014196 381 QEGKKMMKNLVQQSL 395 (429)
Q Consensus 381 ~~~k~~l~~~~~~~~ 395 (429)
..+-.+|.+++..+-
T Consensus 379 ~~a~~aL~~l~~~~~ 393 (450)
T 2jdq_A 379 QVALNGLENILRLGE 393 (450)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhch
Confidence 888889999888554
No 19
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=99.95 E-value=2.3e-27 Score=221.00 Aligned_cols=238 Identities=22% Similarity=0.272 Sum_probs=218.4
Q ss_pred CcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhcc-CCCccc
Q 014196 114 GVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSL-ANTHIP 192 (429)
Q Consensus 114 G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~-~~~~~~ 192 (429)
|+||.|+.+|.+++++++..|+++|.+++.++++++..+++.|+++.|+.++.+.+.+.+..++.+|.+|+.. ++++..
T Consensus 2 ~~i~~L~~~L~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 81 (252)
T 4hxt_A 2 NDVEKLVKLLTSTDSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKA 81 (252)
T ss_dssp CHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred CcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHH
Confidence 6799999999999999999999999999998766899999999999999999999999999999999999987 567788
Q ss_pred cccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhcc-CCCChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhC-Ch
Q 014196 193 LSSSEILPFLVGILESGSSVETKELCIGALYNLSA-VLDNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVV-TS 269 (429)
Q Consensus 193 i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~-~~~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~-~~ 269 (429)
+.+.|+++.|+.+|.+++. .++..|+++|.||+. .++++..+++.|+++.|+.+|.+.+ .++..++.+|.+|+. .+
T Consensus 82 ~~~~~~i~~l~~ll~~~~~-~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~ 160 (252)
T 4hxt_A 82 IVDAGGVEVLVKLLTSTDS-EVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPD 160 (252)
T ss_dssp HHHTTHHHHHHHHTTCSSH-HHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCH
T ss_pred HHHCCCHHHHHHHHcCCCH-HHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCH
Confidence 8899999999999998886 799999999999994 6677889999999999999999876 899999999999998 56
Q ss_pred hcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHHHhhCCHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHH
Q 014196 270 TGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQW 349 (429)
Q Consensus 270 e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~ 349 (429)
+.+..+.+.|++ +.|++++. ++++..++.|+++|.+++..+++.++.+.+.|+++.|+.++.++++.+++.|.|+|.+
T Consensus 161 ~~~~~~~~~~~i-~~L~~ll~-~~~~~v~~~a~~~L~~l~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~ 238 (252)
T 4hxt_A 161 EAIKAIVDAGGV-EVLVKLLT-STDSEVQKEAARALANIASGPTSAIKAIVDAGGVEVLQKLLTSTDSEVQKEAQRALEN 238 (252)
T ss_dssp HHHHHHHHTTHH-HHHHHHTT-CSCHHHHHHHHHHHHHHTTSBHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCcCH-HHHHHHHC-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHCCCcHHHHHHHHHHHHH
Confidence 666788887766 49999998 7889999999999999999888999999999999999999999999999999999999
Q ss_pred HHhcc
Q 014196 350 FKDER 354 (429)
Q Consensus 350 l~~~~ 354 (429)
+....
T Consensus 239 l~~~~ 243 (252)
T 4hxt_A 239 IKSGG 243 (252)
T ss_dssp HHHTC
T ss_pred HHcCC
Confidence 99854
No 20
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=99.95 E-value=2.3e-27 Score=222.09 Aligned_cols=235 Identities=20% Similarity=0.248 Sum_probs=213.3
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHHH
Q 014196 73 LLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIM 152 (429)
Q Consensus 73 ~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~i 152 (429)
..+.+++.|.+++++.+..|+..|+++...++.++..+.+.|++|.|+.+|.++++.++..|+++|.+++.++++++..+
T Consensus 13 ~~~~~~~~L~s~~~~~~~~a~~~L~~~l~~~~~~~~~~~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i 92 (252)
T 4db8_A 13 ELPQMTQQLNSDDMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAV 92 (252)
T ss_dssp SHHHHHHHHHSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred hHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCchHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 38899999999999999999999987666677889999999999999999999999999999999999999776789999
Q ss_pred HhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCc-cccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCC-C
Q 014196 153 VEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTH-IPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVL-D 230 (429)
Q Consensus 153 v~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~-~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~-~ 230 (429)
++.|+++.|+.++++.+.+.++.++.+|.+|+..+..+ ..+.+.|++|.|+++|.+++. .++..|+++|.||+... +
T Consensus 93 ~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~-~v~~~a~~~L~~l~~~~~~ 171 (252)
T 4db8_A 93 IDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNE-QILQEALWALSNIASGGNE 171 (252)
T ss_dssp HHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCH-HHHHHHHHHHHHHTTSCHH
T ss_pred HHcCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHHhCCCH-HHHHHHHHHHHHHHcCChH
Confidence 99999999999999999999999999999999888777 677799999999999999887 79999999999999854 5
Q ss_pred ChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhC-ChhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHHH
Q 014196 231 NARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVV-TSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMIL 308 (429)
Q Consensus 231 n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~-~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L 308 (429)
+...+++.|+++.|+.+|.+++ .+++.|+.+|.+|+. +++.+..+.+.|+++ .|++++. ++++..++.|+++|.+|
T Consensus 172 ~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~-~L~~ll~-~~~~~v~~~A~~~L~~l 249 (252)
T 4db8_A 172 QIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALE-KLEQLQS-HENEKIQKEAQEALEKL 249 (252)
T ss_dssp HHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHH-HHHTTTT-CSSSHHHHTHHHHHHTT
T ss_pred HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHH-HHHHHhC-CCCHHHHHHHHHHHHHH
Confidence 5678889999999999999876 899999999999996 678888888877765 8999998 78999999999999998
Q ss_pred hh
Q 014196 309 AH 310 (429)
Q Consensus 309 ~~ 310 (429)
+.
T Consensus 250 ~~ 251 (252)
T 4db8_A 250 QS 251 (252)
T ss_dssp C-
T ss_pred hc
Confidence 74
No 21
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=99.95 E-value=2.4e-26 Score=238.79 Aligned_cols=316 Identities=14% Similarity=0.084 Sum_probs=264.8
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHhhh-chHHHHHHHhcCcHHHHHHhhcCC-CHHHHHHHHHHHHHhccCCCchHH
Q 014196 73 LLQKSVKRLHFGSWEEKEMAAKEIEKLAKE-DVKIKKLMAELGVIQMLVSMVSTE-VIGRRRAAIKALIQLANGTYTNKA 150 (429)
Q Consensus 73 ~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~-~~~~r~~i~~~G~i~~Lv~lL~s~-~~~~~~~A~~aL~nLa~~~~~nk~ 150 (429)
.++.++..|.+++++.+..|+..|+.+... +...+..+++.|++|.|+.+|.++ ++.++..|+++|.+++.+++.++.
T Consensus 88 ~i~~lv~~L~s~~~~~~~~A~~~L~~ll~~~~~~~~~~~~~~g~i~~Lv~~L~~~~~~~v~~~A~~~L~~l~~~~~~~~~ 167 (530)
T 1wa5_B 88 ELPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTK 167 (530)
T ss_dssp CHHHHHHHHSCSSHHHHHHHHHHHHHHTCCSSSCSHHHHHHTTCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCCccHHHHHHCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHHH
Confidence 489999999999999999999999998653 244667888999999999999997 899999999999999998766788
Q ss_pred HHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccC-CCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCC
Q 014196 151 IMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLA-NTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVL 229 (429)
Q Consensus 151 ~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~-~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~ 229 (429)
.+++.|+++.|+.+|.+.+.++++.|+++|.+|+... .++..+...|+++.|+.++.+.+. .++..|+++|.||+.+.
T Consensus 168 ~~~~~g~i~~Lv~lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~-~v~~~a~~~L~~L~~~~ 246 (530)
T 1wa5_B 168 VVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKP-SLIRTATWTLSNLCRGK 246 (530)
T ss_dssp HHHHTTCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGSCCH-HHHHHHHHHHHHHHCCS
T ss_pred HHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCccchHHHHHcCcHHHHHHHhccCCH-HHHHHHHHHHHHHhCCC
Confidence 8999999999999999989999999999999999764 566677788999999999998766 79999999999999876
Q ss_pred -CChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCC-hhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHH
Q 014196 230 -DNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVT-STGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILM 306 (429)
Q Consensus 230 -~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~-~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~ 306 (429)
.+.......|++|.|+.+|.+.+ .++..++.+|.+|+.. ++....+.+.|++ +.|+++|. +.++..++.|+.+|.
T Consensus 247 ~~~~~~~~~~~~l~~L~~lL~~~d~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v-~~Lv~lL~-~~~~~v~~~a~~~L~ 324 (530)
T 1wa5_B 247 KPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIP-KRLVELLS-HESTLVQTPALRAVG 324 (530)
T ss_dssp SSCCCHHHHGGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCH-HHHHHGGG-CSCHHHHHHHHHHHH
T ss_pred CCCCcHHHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhcCcH-HHHHHHHC-CCChhhHHHHHHHHH
Confidence 56667777899999999998876 8999999999999974 6777888886666 59999998 788999999999999
Q ss_pred HHhhCCHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHhcc--ccC--CCCCCCCCccccccCCCCChhhhHH
Q 014196 307 ILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKDER--QAK--MGPHSGPQTRRVSIGSPVSPREAQE 382 (429)
Q Consensus 307 ~L~~~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (429)
+++.+++...+.+++.|++|.|+.++.++++.+++.|+|+|.++.... +.+ ......|.+. .....++.+.+..
T Consensus 325 ~l~~~~~~~~~~~~~~~~l~~L~~lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~--~lL~~~~~~v~~~ 402 (530)
T 1wa5_B 325 NIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLV--KLLEVAEYKTKKE 402 (530)
T ss_dssp HHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHH--HHHHHSCHHHHHH
T ss_pred HHHcCCHHHHHHHHHcchHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHH--HHHhcCCHHHHHH
Confidence 999988888889999999999999999999999999999999998522 110 0000101110 1122335677888
Q ss_pred HHHHHHHHHHH
Q 014196 383 GKKMMKNLVQQ 393 (429)
Q Consensus 383 ~k~~l~~~~~~ 393 (429)
+-.+|.++...
T Consensus 403 a~~aL~~l~~~ 413 (530)
T 1wa5_B 403 ACWAISNASSG 413 (530)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 88888888764
No 22
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=99.95 E-value=9.6e-27 Score=216.84 Aligned_cols=236 Identities=22% Similarity=0.279 Sum_probs=216.1
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHHH
Q 014196 73 LLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIM 152 (429)
Q Consensus 73 ~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~i 152 (429)
.++.+++.|.+++++.+..|+..|.+++..+++++..+.+.|+++.|+.+|.++++++++.|+++|.+|+.+++.++..+
T Consensus 3 ~i~~L~~~L~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~ 82 (252)
T 4hxt_A 3 DVEKLVKLLTSTDSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAI 82 (252)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred cHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHH
Confidence 58999999999999999999999999999888899999999999999999999999999999999999999966789999
Q ss_pred HhcCccchhhhhccCCCHHHHHHHHHHHHHhhc-cCCCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCCC-
Q 014196 153 VEAGILTKLPKNVDAVDESTRHEFGELLLSLSS-LANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVLD- 230 (429)
Q Consensus 153 v~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~-~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~- 230 (429)
++.|+++.|+.++.+.+.+.+..++.+|.+|+. .++++..+.+.|+++.|++++.+++. .++..|+++|.||+...+
T Consensus 83 ~~~~~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~-~~~~~a~~~L~~l~~~~~~ 161 (252)
T 4hxt_A 83 VDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDS-EVQKEAARALANIASGPDE 161 (252)
T ss_dssp HHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCH-HHHHHHHHHHHHHTTSCHH
T ss_pred HHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCCCH-HHHHHHHHHHHHHHcCCHH
Confidence 999999999999999889999999999999994 45677778889999999999999887 799999999999998654
Q ss_pred ChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhC-ChhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHHH
Q 014196 231 NARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVV-TSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMIL 308 (429)
Q Consensus 231 n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~-~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L 308 (429)
++..+++.|+++.|+.+|.+++ .+++.++.+|.+|+. +++.++.+.+.|+++ .|++++. ++++..++.|+++|.+|
T Consensus 162 ~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~l~~~~~i~-~L~~ll~-~~~~~v~~~a~~~L~~l 239 (252)
T 4hxt_A 162 AIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPTSAIKAIVDAGGVE-VLQKLLT-STDSEVQKEAQRALENI 239 (252)
T ss_dssp HHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSBHHHHHHHHHTTHHH-HHHHGGG-CSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHCcCHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHH-HHHHHHC-CCcHHHHHHHHHHHHHH
Confidence 4478999999999999999776 899999999999998 677888888877765 9999998 78899999999999999
Q ss_pred hhC
Q 014196 309 AHQ 311 (429)
Q Consensus 309 ~~~ 311 (429)
+..
T Consensus 240 ~~~ 242 (252)
T 4hxt_A 240 KSG 242 (252)
T ss_dssp HHT
T ss_pred HcC
Confidence 974
No 23
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=99.95 E-value=8.1e-27 Score=218.30 Aligned_cols=236 Identities=17% Similarity=0.240 Sum_probs=213.7
Q ss_pred CcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhc-cCCCccc
Q 014196 114 GVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSS-LANTHIP 192 (429)
Q Consensus 114 G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~-~~~~~~~ 192 (429)
...+.++.+|.++|++++..|+++|.++...++.++..+++.|+++.|+.+|++.+.+.+..++.+|.+|+. .++++..
T Consensus 12 ~~~~~~~~~L~s~~~~~~~~a~~~L~~~l~~~~~~~~~~~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 91 (252)
T 4db8_A 12 SELPQMTQQLNSDDMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQA 91 (252)
T ss_dssp CSHHHHHHHHHSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred chHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCchHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 458999999999999999999999987655444688899999999999999999889999999999999997 4567788
Q ss_pred cccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCCCCh-hHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhC-Ch
Q 014196 193 LSSSEILPFLVGILESGSSVETKELCIGALYNLSAVLDNA-RPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVV-TS 269 (429)
Q Consensus 193 i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~n~-~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~-~~ 269 (429)
+.+.|++|.|+++|.+++. .++..|+++|.||+.+++++ ..+++.|++|.|+.+|.+.+ .+++.++.+|.+|+. .+
T Consensus 92 i~~~g~i~~L~~lL~~~~~-~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~ 170 (252)
T 4db8_A 92 VIDAGALPALVQLLSSPNE-QILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGN 170 (252)
T ss_dssp HHHTTHHHHHHHGGGCSCH-HHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCH
T ss_pred HHHcCCHHHHHHHHcCCCH-HHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCh
Confidence 8899999999999999886 79999999999999998888 88999999999999998876 899999999999998 56
Q ss_pred hcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHHHhhCCHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHH
Q 014196 270 TGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQW 349 (429)
Q Consensus 270 e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~ 349 (429)
+.+..+.+.|+++ .|+++|. ++++..++.|+++|.+++..+++.++.+.+.|+++.|+.++.++++.+++.|+|+|.+
T Consensus 171 ~~~~~~~~~~~i~-~L~~ll~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~v~~~A~~~L~~ 248 (252)
T 4db8_A 171 EQIQAVIDAGALP-ALVQLLS-SPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHENEKIQKEAQEALEK 248 (252)
T ss_dssp HHHHHHHHTTCHH-HHHHGGG-CSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHTTTTCSSSHHHHTHHHHHHT
T ss_pred HHHHHHHHCCCHH-HHHHHHC-CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 7777888877665 9999998 7889999999999999998889999999999999999999999999999999999988
Q ss_pred HHh
Q 014196 350 FKD 352 (429)
Q Consensus 350 l~~ 352 (429)
+..
T Consensus 249 l~~ 251 (252)
T 4db8_A 249 LQS 251 (252)
T ss_dssp TC-
T ss_pred Hhc
Confidence 753
No 24
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=99.95 E-value=3.5e-26 Score=236.30 Aligned_cols=277 Identities=18% Similarity=0.094 Sum_probs=244.8
Q ss_pred HHHHHHHHHHhcCC-CHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchH
Q 014196 71 CVLLQKSVKRLHFG-SWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNK 149 (429)
Q Consensus 71 ~~~l~~lv~~L~~~-~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk 149 (429)
.+.++.+++.|.++ +++.+..|+..|++++.+ ++++..+.+.|++|.|+.+|.++++.++..|+++|.||+.+++.++
T Consensus 58 ~~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~~-~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~ 136 (529)
T 1jdh_A 58 PQMVSAIVRTMQNTNDVETARCTAGTLHNLSHH-REGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAK 136 (529)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTS-HHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHH
T ss_pred cchHHHHHHHHhcCCCHHHHHHHHHHHHHHHcC-chhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcchH
Confidence 46799999999865 899999999999999975 4699999999999999999999999999999999999999875678
Q ss_pred HHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhcc-CCCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccC
Q 014196 150 AIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSL-ANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAV 228 (429)
Q Consensus 150 ~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~-~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~ 228 (429)
..+++.|++|.|+.++.+.+.+.+..++.+|.+++.. ++++..+.+.|+++.|+++|++++....+..++.+|.||+.+
T Consensus 137 ~~i~~~g~i~~L~~ll~~~~~~~~~~~~~~L~~la~~~~~~~~~i~~~~~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~~ 216 (529)
T 1jdh_A 137 MAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVC 216 (529)
T ss_dssp HHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTS
T ss_pred HHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHHhCChHHHHHHHHHHHHHHhcC
Confidence 8899999999999999998888888888999999975 467778888899999999999987766777889999999999
Q ss_pred CCChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCChhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHH
Q 014196 229 LDNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMI 307 (429)
Q Consensus 229 ~~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~ 307 (429)
++++..+++.|+++.|+.++.+.+ .+++.++.+|.+|+........ . .++++.|++++. +.++..++.|+++|.+
T Consensus 217 ~~~~~~~~~~g~~~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~--~-~~~i~~L~~ll~-~~~~~v~~~a~~~L~~ 292 (529)
T 1jdh_A 217 SSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEG--M-EGLLGTLVQLLG-SDDINVVTCAAGILSN 292 (529)
T ss_dssp TTHHHHHHHTTHHHHHHTTTTSSCHHHHHHHHHHHHHHHTTCTTCSC--C-HHHHHHHHHHTT-CSCHHHHHHHHHHHHH
T ss_pred cccHHHHHHCCCHHHHHHHHhCCChHHHHHHHHHHHHHhcCChhhHH--H-HhHHHHHHHHHc-CCCHHHHHHHHHHHHH
Confidence 999999999999999999998776 8899999999999985432211 1 234468999998 7899999999999999
Q ss_pred HhhCCHHHHHHHHhCCchHHHHHHhhcC--CHHHHHHHHHHHHHHHh
Q 014196 308 LAHQSSEQRDKMAKSGIVHVSLQLALLG--SPLAQRRASKLLQWFKD 352 (429)
Q Consensus 308 L~~~~~~~~~~i~~~G~v~~L~~ll~~~--~~~~k~~A~~lL~~l~~ 352 (429)
++.++++.++.+.+.|+++.|+.++... ++.++..|.++|+++..
T Consensus 293 L~~~~~~~~~~~~~~~~v~~L~~ll~~~~~~~~v~~~a~~~L~nl~~ 339 (529)
T 1jdh_A 293 LTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTS 339 (529)
T ss_dssp HTTTCHHHHHHHHHTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTS
T ss_pred HhcCCHHHHHHHHHcCChHHHHHHHHccCCHHHHHHHHHHHHHHHHc
Confidence 9998888999999999999999999863 37899999999999874
No 25
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=99.94 E-value=5.1e-27 Score=217.18 Aligned_cols=195 Identities=22% Similarity=0.220 Sum_probs=173.8
Q ss_pred HHHHHHHHhcCCCH--HHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHH
Q 014196 73 LLQKSVKRLHFGSW--EEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKA 150 (429)
Q Consensus 73 ~l~~lv~~L~~~~~--~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~ 150 (429)
.++.+|+.|.++++ +.|..|+..|++++.+++.+|..+++.|+||+||.+|+++++++|+.|+++|.||+.++++||.
T Consensus 9 ~i~~lV~lL~s~~~~~~~q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s~~~~vq~~Aa~aL~nLa~~~~~nk~ 88 (233)
T 3tt9_A 9 TLERAVSMLEADHMLPSRISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNKL 88 (233)
T ss_dssp CHHHHHHTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred cHHHHHHHhCCCCchHHHHHHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHH
Confidence 38999999999987 8889999999999999999999999999999999999999999999999999999997667999
Q ss_pred HHHhcCccchhhhhcc-CCCHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhh---cCC------------cHHH
Q 014196 151 IMVEAGILTKLPKNVD-AVDESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILE---SGS------------SVET 214 (429)
Q Consensus 151 ~iv~~G~i~~Lv~lL~-~~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~---~~~------------~~~~ 214 (429)
.|+++|+||+|+.+|. +++.+.+++++.+||+||..+.++..|.+ ++||+|+.++. +|. ...+
T Consensus 89 ~I~~~GaI~~Lv~lL~~~~~~~~~e~a~~aL~nLS~~~~~k~~i~~-~~i~~Lv~ll~~p~sG~~~~~~~~~~~~~~~~v 167 (233)
T 3tt9_A 89 EVAELNGVPRLLQVLKQTRDLETKKQITGLLWNLSSNDKLKNLMIT-EALLTLTENIIIPFSGWPEGDYPKANGLLDFDI 167 (233)
T ss_dssp HHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSGGGHHHHHH-HHHHHHCCCCCHHHHCCCGGGCCCCCTTCCHHH
T ss_pred HHHHcCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcChhhHHHHHh-ccHHHHHHHHhccccCCcccccccccccchHHH
Confidence 9999999999999998 57889999999999999999999998886 47999999763 221 2378
Q ss_pred HHHHHHHHHHhccC-CCChhHHHhc-CcHHHHHHhccC------Cc-chHHHHHHHHHHhhCC
Q 014196 215 KELCIGALYNLSAV-LDNARPMVSN-GVVHTLLKLCSM------KE-RLSEKSLATLGNLVVT 268 (429)
Q Consensus 215 ~~~A~~aL~nLs~~-~~n~~~iv~~-G~v~~Lv~lL~~------~~-~~~~~a~~~L~~La~~ 268 (429)
+++|..+|+||+.. ++++..|.+. |+|+.|+.+++. .+ ..+|.|+.+|+||+..
T Consensus 168 ~~na~~~L~nLss~~~~~R~~~r~~~Gli~~Lv~~l~~~~~~~~~~~k~~En~v~~L~nLs~~ 230 (233)
T 3tt9_A 168 FYNVTGCLRNMSSAGADGRKAMRRCDGLIDSLVHYVRGTIADYQPDDKATENCVCILHNLSYQ 230 (233)
T ss_dssp HHHHHHHHHHHTTSCHHHHHHHHTSTTHHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHCCCcHHHHHHHHHhhhhcccchhHHHHHHHHHHHHHHhh
Confidence 99999999999985 5889999986 778999999873 13 7899999999999864
No 26
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=99.94 E-value=8.9e-26 Score=240.19 Aligned_cols=277 Identities=18% Similarity=0.101 Sum_probs=244.3
Q ss_pred HHHHHHHHHHhcCC-CHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchH
Q 014196 71 CVLLQKSVKRLHFG-SWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNK 149 (429)
Q Consensus 71 ~~~l~~lv~~L~~~-~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk 149 (429)
.+.++.+++.|.++ +++.+..|+..|+.++.++ +++..+.+.|+++.|+.+|.++++.++..|+++|.||+.+++.++
T Consensus 55 ~~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls~~~-~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~~~ 133 (644)
T 2z6h_A 55 PQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHR-EGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAK 133 (644)
T ss_dssp HHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSH-HHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSTTHH
T ss_pred cChHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCh-hhHHHHHHcCCHHHHHHHHhCCCHHHHHHHHHHHHHHHhCcchhH
Confidence 46799999999876 8899999999999999864 699999999999999999999999999999999999998875678
Q ss_pred HHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhc-cCCCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccC
Q 014196 150 AIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSS-LANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAV 228 (429)
Q Consensus 150 ~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~-~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~ 228 (429)
..+++.|++|.|+.+|.+.+...+..++.+|.+|+. +++++..+.+.|+++.|+++|++++....+..++.+|+||+.+
T Consensus 134 ~~v~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~La~~~~~~~~~i~~~g~v~~Lv~lL~~~~~~~~~~~a~~~L~nLs~~ 213 (644)
T 2z6h_A 134 MAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVC 213 (644)
T ss_dssp HHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHCCChHHHHHHHCcCCHHHHHHHHHHHHHHHhcCcHHHHHHHHcCChHHHHHHHHcCChHHHHHHHHHHHHHHhcC
Confidence 889999999999999998887777777889999996 5577888889999999999999887667888999999999999
Q ss_pred CCChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCChhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHH
Q 014196 229 LDNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMI 307 (429)
Q Consensus 229 ~~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~ 307 (429)
++++..+++.|+++.|+.++.+.+ .+++.++.+|.+|+...... ... .++++.|+++|. +.++..++.|+++|.+
T Consensus 214 ~~~~~~l~~~g~l~~L~~ll~~~~~~~~~~a~~~L~nL~~~~~~~--~~~-~~~i~~Lv~lL~-~~d~~v~~~a~~aL~~ 289 (644)
T 2z6h_A 214 SSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQ--EGM-EGLLGTLVQLLG-SDDINVVTCAAGILSN 289 (644)
T ss_dssp TTHHHHHHHTTHHHHHHTTTTCSCHHHHHHHHHHHHHHGGGCTTC--CSC-HHHHHHHHHHTT-CSCHHHHHHHHHHHHH
T ss_pred cccHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhhcchhh--hhh-hhHHHHHHHHHc-CCCHHHHHHHHHHHHH
Confidence 999999999999999999998765 89999999999999743221 111 134468999998 7889999999999999
Q ss_pred HhhCCHHHHHHHHhCCchHHHHHHhhc-CC-HHHHHHHHHHHHHHHh
Q 014196 308 LAHQSSEQRDKMAKSGIVHVSLQLALL-GS-PLAQRRASKLLQWFKD 352 (429)
Q Consensus 308 L~~~~~~~~~~i~~~G~v~~L~~ll~~-~~-~~~k~~A~~lL~~l~~ 352 (429)
|+..+++.++.+.+.|+++.|+.++.. ++ +.++..|.++|+++..
T Consensus 290 L~~~~~~~~~~v~~~g~v~~Lv~lL~~~~~~~~v~~~a~~aL~nL~~ 336 (644)
T 2z6h_A 290 LTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTS 336 (644)
T ss_dssp HHTTCHHHHHHHHHTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTS
T ss_pred HHcCCHHHHHHHHHcCCHHHHHHHHHccCCcHHHHHHHHHHHHHHhc
Confidence 999888999999999999999999987 33 7999999999999964
No 27
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=99.94 E-value=1.2e-24 Score=220.10 Aligned_cols=315 Identities=15% Similarity=0.113 Sum_probs=254.6
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHhh--hchHHHHHHHhc-CcHHHHHHhhcCC-CHHHHHHHHHHHHHhccCCCch
Q 014196 73 LLQKSVKRLHFGSWEEKEMAAKEIEKLAK--EDVKIKKLMAEL-GVIQMLVSMVSTE-VIGRRRAAIKALIQLANGTYTN 148 (429)
Q Consensus 73 ~l~~lv~~L~~~~~~~~~~Aa~~L~~La~--~~~~~r~~i~~~-G~i~~Lv~lL~s~-~~~~~~~A~~aL~nLa~~~~~n 148 (429)
.++.+++.|.++++..+..|+..|+.+.. .++.. ..+.+. |++|.|+.+|.++ ++.++..|+++|.+++.++.++
T Consensus 21 ~l~~l~~~l~s~~~~~r~~A~~~L~~l~~~~~~~~~-~~~~~~~~~i~~L~~~L~~~~~~~v~~~a~~~L~~l~~~~~~~ 99 (450)
T 2jdq_A 21 ITSDMIEMIFSKSPEQQLSATQKFRKLLSKEPNPPI-DEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQ 99 (450)
T ss_dssp -CHHHHHHHHSSCHHHHHHHHHHHHHHHHSSSSCCH-HHHHTSTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHSSCHHH
T ss_pred cHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCCcH-HHHHHcCCcHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHH
Confidence 37889999999999999999999999754 34344 446666 9999999999998 8999999999999999976567
Q ss_pred HHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccC-CCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhcc
Q 014196 149 KAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLA-NTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSA 227 (429)
Q Consensus 149 k~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~-~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~ 227 (429)
...+++.|++|.|+.++.+.+.+.++.++.+|.+++... .++..+.+.|+++.|++++.++....++..|+++|.||+.
T Consensus 100 ~~~~~~~~~i~~L~~lL~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~ 179 (450)
T 2jdq_A 100 TRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCR 179 (450)
T ss_dssp HHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTTSCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHhCCCHHHHHHHHcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhC
Confidence 778889999999999999988999999999999999765 4566677889999999999964334799999999999997
Q ss_pred CC--CChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCC-hhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHH
Q 014196 228 VL--DNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVT-STGKKAMEDSPLVPESLIEILTWEEKPKCQELSAY 303 (429)
Q Consensus 228 ~~--~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~-~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~ 303 (429)
.. .....++ .|++|.|+.++.+.+ .++..++.+|.+|+.. ++.+..+...|.+ +.|+++|. +.++..++.|+.
T Consensus 180 ~~~~~~~~~~~-~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i-~~L~~ll~-~~~~~v~~~a~~ 256 (450)
T 2jdq_A 180 GKSPPPEFAKV-SPCLNVLSWLLFVSDTDVLADACWALSYLSDGPNDKIQAVIDAGVC-RRLVELLM-HNDYKVVSPALR 256 (450)
T ss_dssp CSSSCCCGGGT-GGGHHHHHHHTTCCCHHHHHHHHHHHHHHTSSSHHHHHHHHHTTTH-HHHHHHTT-CSCHHHHHHHHH
T ss_pred CCCCCCCHHHH-HHHHHHHHHHHccCCHHHHHHHHHHHHHHHCCCcHHHHHHHHcCcH-HHHHHHHC-CCchhHHHHHHH
Confidence 64 3334444 899999999998776 8899999999999984 5677777776665 59999998 788999999999
Q ss_pred HHHHHhhCCHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHhcc-c-cC--CCCCCCCCccccccCCCCChhh
Q 014196 304 ILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKDER-Q-AK--MGPHSGPQTRRVSIGSPVSPRE 379 (429)
Q Consensus 304 ~L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~~~-~-~~--~~~~~~~~~~~~~~~~~~~~~~ 379 (429)
+|.+++.+++...+.+++.|+++.|+.++.++++.+++.|+|+|.++.... . .. ......|.+ +.....++.+.
T Consensus 257 ~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L--~~~l~~~~~~v 334 (450)
T 2jdq_A 257 AVGNIVTGDDIQTQVILNCSALQSLLHLLSSPKESIKKEACWTISNITAGNRAQIQTVIDANIFPAL--ISILQTAEFRT 334 (450)
T ss_dssp HHHHHTTSCHHHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHH--HHHHHHSCHHH
T ss_pred HHHHHhhCChHHHHHHHHCccHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHH--HHHHhcCCHHH
Confidence 999999988888888999999999999999999999999999999998521 1 10 000000000 01112235677
Q ss_pred hHHHHHHHHHHHHH
Q 014196 380 AQEGKKMMKNLVQQ 393 (429)
Q Consensus 380 ~~~~k~~l~~~~~~ 393 (429)
+..+-.+|.++...
T Consensus 335 ~~~a~~~L~~l~~~ 348 (450)
T 2jdq_A 335 RKEAAWAITNATSG 348 (450)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC
Confidence 78888888888754
No 28
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=99.94 E-value=2.4e-25 Score=230.04 Aligned_cols=279 Identities=16% Similarity=0.079 Sum_probs=243.7
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHH
Q 014196 71 CVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKA 150 (429)
Q Consensus 71 ~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~ 150 (429)
.+.++.+++.|.++++..+..|+..|.+++.+++.++..+++.|++|.|+.+|.+++..++..++.+|.+++.++++++.
T Consensus 100 ~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~~~~L~~la~~~~~~~~ 179 (529)
T 1jdh_A 100 SGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKL 179 (529)
T ss_dssp TTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred cCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcchHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHH
Confidence 46799999999999999999999999999998778899999999999999999999999999999999999998767899
Q ss_pred HHHhcCccchhhhhccCCCHH-HHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCC
Q 014196 151 IMVEAGILTKLPKNVDAVDES-TRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVL 229 (429)
Q Consensus 151 ~iv~~G~i~~Lv~lL~~~~~~-~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~ 229 (429)
.+++.|+++.|+.+++..+.+ .+..++.+|++|+..++++..+.+.|+++.|+.++.+++. .+++.++++|.||+...
T Consensus 180 ~i~~~~~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~g~~~~L~~ll~~~~~-~~~~~a~~~L~~l~~~~ 258 (529)
T 1jdh_A 180 IILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQ-RLVQNCLWTLRNLSDAA 258 (529)
T ss_dssp HHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSTTHHHHHHHTTHHHHHHTTTTSSCH-HHHHHHHHHHHHHHTTC
T ss_pred HHHHCCCHHHHHHHHHhCChHHHHHHHHHHHHHHhcCcccHHHHHHCCCHHHHHHHHhCCCh-HHHHHHHHHHHHHhcCC
Confidence 999999999999999876644 4555677999999888888888899999999999999876 78999999999999875
Q ss_pred CChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCC-hhcHHHHhcCCCChHHHHHhcccC-CChhHHHHHHHHHH
Q 014196 230 DNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVT-STGKKAMEDSPLVPESLIEILTWE-EKPKCQELSAYILM 306 (429)
Q Consensus 230 ~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~-~e~~~~i~~~~~i~~~Lv~~L~~~-~s~~~~e~A~~~L~ 306 (429)
.... ...|++|.|+.+|.+.+ ++++.++.+|.+|+.. ++.+..+.+.|+++ .|+++|... .++..++.|+.+|.
T Consensus 259 ~~~~--~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v~-~L~~ll~~~~~~~~v~~~a~~~L~ 335 (529)
T 1jdh_A 259 TKQE--GMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIE-ALVRTVLRAGDREDITEPAICALR 335 (529)
T ss_dssp TTCS--CCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTTCHHHHHHHHHTTHHH-HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhH--HHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCChH-HHHHHHHccCCHHHHHHHHHHHHH
Confidence 4432 23589999999998765 8999999999999984 67999999988775 899999732 33789999999999
Q ss_pred HHhhCC---HHHHHHHHhCCchHHHHHHhhcCC-HHHHHHHHHHHHHHHhc
Q 014196 307 ILAHQS---SEQRDKMAKSGIVHVSLQLALLGS-PLAQRRASKLLQWFKDE 353 (429)
Q Consensus 307 ~L~~~~---~~~~~~i~~~G~v~~L~~ll~~~~-~~~k~~A~~lL~~l~~~ 353 (429)
+|+..+ +..+..+.+.|++|.|+.++.++. +.+++.|+|+|.++...
T Consensus 336 nl~~~~~~~~~~~~~i~~~~~i~~L~~lL~~~~~~~v~~~a~~~l~nl~~~ 386 (529)
T 1jdh_A 336 HLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALC 386 (529)
T ss_dssp HHTSSSTTHHHHHHHHHHTTCHHHHHHTTSTTCCHHHHHHHHHHHHHHTTS
T ss_pred HHHcCCchHHHHHHHHHHcCChhHHHHHhccccchHHHHHHHHHHHHHhcC
Confidence 998754 336788999999999999999875 68999999999998854
No 29
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=99.93 E-value=4.2e-26 Score=211.07 Aligned_cols=195 Identities=20% Similarity=0.191 Sum_probs=173.0
Q ss_pred cHHHHHHhhcCCCH--HHHHHHHHHHHHhccCCCchHHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhcc-CCCcc
Q 014196 115 VIQMLVSMVSTEVI--GRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSL-ANTHI 191 (429)
Q Consensus 115 ~i~~Lv~lL~s~~~--~~~~~A~~aL~nLa~~~~~nk~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~-~~~~~ 191 (429)
.+|.||.+|.++|+ ++|..|+++|.+|+.+++++|..|++.|+||+|+.+|.+++.+.++.|+++|.+|+.. ++++.
T Consensus 9 ~i~~lV~lL~s~~~~~~~q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s~~~~vq~~Aa~aL~nLa~~~~~nk~ 88 (233)
T 3tt9_A 9 TLERAVSMLEADHMLPSRISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNKL 88 (233)
T ss_dssp CHHHHHHTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred cHHHHHHHhCCCCchHHHHHHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHH
Confidence 48999999999988 8999999999999988767999999999999999999999999999999999999974 57899
Q ss_pred ccccCCcHHHHHHhhhc-CCcHHHHHHHHHHHHHhccCCCChhHHHhcCcHHHHHHhccC----------------Cc-c
Q 014196 192 PLSSSEILPFLVGILES-GSSVETKELCIGALYNLSAVLDNARPMVSNGVVHTLLKLCSM----------------KE-R 253 (429)
Q Consensus 192 ~i~~~g~i~~Lv~lL~~-~~~~~~~~~A~~aL~nLs~~~~n~~~iv~~G~v~~Lv~lL~~----------------~~-~ 253 (429)
.|.+.|+||+|+++|.+ ++. +++++|+.+|+||+.+++++..+++ +++|+|+.++.. .+ .
T Consensus 89 ~I~~~GaI~~Lv~lL~~~~~~-~~~e~a~~aL~nLS~~~~~k~~i~~-~~i~~Lv~ll~~p~sG~~~~~~~~~~~~~~~~ 166 (233)
T 3tt9_A 89 EVAELNGVPRLLQVLKQTRDL-ETKKQITGLLWNLSSNDKLKNLMIT-EALLTLTENIIIPFSGWPEGDYPKANGLLDFD 166 (233)
T ss_dssp HHHHTTHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHTSGGGHHHHHH-HHHHHHCCCCCHHHHCCCGGGCCCCCTTCCHH
T ss_pred HHHHcCCHHHHHHHHccCCCH-HHHHHHHHHHHHHHcChhhHHHHHh-ccHHHHHHHHhccccCCcccccccccccchHH
Confidence 99999999999999985 565 7999999999999999999998887 579999987630 12 7
Q ss_pred hHHHHHHHHHHhhC-ChhcHHHHhcCCCChHHHHHhcccC-----CChhHHHHHHHHHHHHhhC
Q 014196 254 LSEKSLATLGNLVV-TSTGKKAMEDSPLVPESLIEILTWE-----EKPKCQELSAYILMILAHQ 311 (429)
Q Consensus 254 ~~~~a~~~L~~La~-~~e~~~~i~~~~~i~~~Lv~~L~~~-----~s~~~~e~A~~~L~~L~~~ 311 (429)
+.++|..+|.||+. ++++|+.|.+++|+++.||.+++.. .+...+|+|+.+|.+||.+
T Consensus 167 v~~na~~~L~nLss~~~~~R~~~r~~~Gli~~Lv~~l~~~~~~~~~~~k~~En~v~~L~nLs~~ 230 (233)
T 3tt9_A 167 IFYNVTGCLRNMSSAGADGRKAMRRCDGLIDSLVHYVRGTIADYQPDDKATENCVCILHNLSYQ 230 (233)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHTSTTHHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHCCCcHHHHHHHHHhhhhcccchhHHHHHHHHHHHHHHhh
Confidence 88999999999998 6799999999988878999999721 2567899999999999864
No 30
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=99.93 E-value=1.4e-24 Score=230.86 Aligned_cols=280 Identities=16% Similarity=0.076 Sum_probs=243.4
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHH
Q 014196 71 CVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKA 150 (429)
Q Consensus 71 ~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~ 150 (429)
.+.++.|++.|.++++..+..|+..|.+++..++..+..+++.|++|.|+.+|.++++.++..++.+|.+|+..+++++.
T Consensus 97 ~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~La~~~~~~~~ 176 (644)
T 2z6h_A 97 SGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKL 176 (644)
T ss_dssp TTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred cCCHHHHHHHHhCCCHHHHHHHHHHHHHHHhCcchhHHHHHHCCChHHHHHHHCcCCHHHHHHHHHHHHHHHhcCcHHHH
Confidence 45789999999999999999999999999998778899999999999999999999999999999999999987667899
Q ss_pred HHHhcCccchhhhhccCCC-HHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCC
Q 014196 151 IMVEAGILTKLPKNVDAVD-ESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVL 229 (429)
Q Consensus 151 ~iv~~G~i~~Lv~lL~~~~-~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~ 229 (429)
.+++.|+++.|+.+++..+ ...+..++.+|++|+..+.++..+.+.|+++.|+.++.+++. .+++.++++|.||+...
T Consensus 177 ~i~~~g~v~~Lv~lL~~~~~~~~~~~a~~~L~nLs~~~~~~~~l~~~g~l~~L~~ll~~~~~-~~~~~a~~~L~nL~~~~ 255 (644)
T 2z6h_A 177 IILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQ-RLVQNCLWTLRNLSDAA 255 (644)
T ss_dssp HHHHTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCTTHHHHHHHTTHHHHHHTTTTCSCH-HHHHHHHHHHHHHGGGC
T ss_pred HHHHcCChHHHHHHHHcCChHHHHHHHHHHHHHHhcCcccHHHHHHCCCHHHHHHHHhcCCH-HHHHHHHHHHHHHhhcc
Confidence 9999999999999998765 456677888999999888888889999999999999999876 79999999999999865
Q ss_pred CChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCC-hhcHHHHhcCCCChHHHHHhcccCCC-hhHHHHHHHHHH
Q 014196 230 DNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVT-STGKKAMEDSPLVPESLIEILTWEEK-PKCQELSAYILM 306 (429)
Q Consensus 230 ~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~-~e~~~~i~~~~~i~~~Lv~~L~~~~s-~~~~e~A~~~L~ 306 (429)
... ....|+++.|+.+|.+.+ .+++.++.+|.+|+.. ++.++.+.+.|+++ .|+++|...++ +..++.|+.+|.
T Consensus 256 ~~~--~~~~~~i~~Lv~lL~~~d~~v~~~a~~aL~~L~~~~~~~~~~v~~~g~v~-~Lv~lL~~~~~~~~v~~~a~~aL~ 332 (644)
T 2z6h_A 256 TKQ--EGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIE-ALVRTVLRAGDREDITEPAICALR 332 (644)
T ss_dssp TTC--CSCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHH-HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhh--hhhhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHH-HHHHHHHccCCcHHHHHHHHHHHH
Confidence 433 223489999999998766 8999999999999984 68899999988775 89999973233 789999999999
Q ss_pred HHhhCCH---HHHHHHHhCCchHHHHHHhhcCC-HHHHHHHHHHHHHHHhcc
Q 014196 307 ILAHQSS---EQRDKMAKSGIVHVSLQLALLGS-PLAQRRASKLLQWFKDER 354 (429)
Q Consensus 307 ~L~~~~~---~~~~~i~~~G~v~~L~~ll~~~~-~~~k~~A~~lL~~l~~~~ 354 (429)
+|+..++ ..+..+++.|+++.|+.++.+.+ +.+++.|+|+|.++...+
T Consensus 333 nL~~~~~~~~~~q~~v~~~~~l~~L~~lL~~~~~~~v~~~a~~~L~nLa~~~ 384 (644)
T 2z6h_A 333 HLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCP 384 (644)
T ss_dssp HHTSSSTTHHHHHHHHHHTTHHHHHHHTTSTTCCHHHHHHHHHHHHHHTTSG
T ss_pred HHhcCCchHHHHHHHHHHccChHHHHHHhCccCchHHHHHHHHHHHHHccCH
Confidence 9997532 35666888999999999999874 689999999999987543
No 31
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=99.93 E-value=2.5e-24 Score=233.67 Aligned_cols=277 Identities=18% Similarity=0.098 Sum_probs=242.3
Q ss_pred HHHHHHHHHHhcCC-CHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchH
Q 014196 71 CVLLQKSVKRLHFG-SWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNK 149 (429)
Q Consensus 71 ~~~l~~lv~~L~~~-~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk 149 (429)
.+.++.|++.|.++ +++.+..|+..|++++.. +.++..+.+.|+|+.|+.+|+++++.++..|+++|.||+.+.+.++
T Consensus 191 ~~~i~~Lv~~L~~~~d~~vr~~Aa~aL~~Ls~~-~~~~~~i~~~g~I~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~ 269 (780)
T 2z6g_A 191 PQMVSAIVRTMQNTNDVETARCTSGTLHNLSHH-REGLLAIFKSGGIPALVNMLGSPVDSVLFHAITTLHNLLLHQEGAK 269 (780)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTS-HHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHSTTHH
T ss_pred cChHHHHHHHHcCCCCHHHHHHHHHHHHHHhCC-chhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCChhhH
Confidence 36789999999865 899999999999999875 5779999999999999999999999999999999999999876678
Q ss_pred HHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhcc-CCCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccC
Q 014196 150 AIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSL-ANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAV 228 (429)
Q Consensus 150 ~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~-~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~ 228 (429)
..+++.|+++.|+.+|.+.+...+..++.+|.+|+.. ++++..+.+.|+++.|+++|++++....+..++.+|.+|+.+
T Consensus 270 ~~v~~~g~v~~Lv~lL~~~~~~v~~~a~~aL~~La~~~~e~~~~i~~~~~i~~Lv~lL~~~~~~~~~~~a~~aL~~Ls~~ 349 (780)
T 2z6g_A 270 MAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVC 349 (780)
T ss_dssp HHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTS
T ss_pred HHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHhcCChHHHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHhhcC
Confidence 8888999999999999988888888888899999864 467777888899999999999887756677899999999999
Q ss_pred CCChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCChhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHH
Q 014196 229 LDNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMI 307 (429)
Q Consensus 229 ~~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~ 307 (429)
+.++..+++.|+++.|+.++.+.+ .+++.++.+|.+|+...... ... .++++.|+++|. +.++..++.|+++|.+
T Consensus 350 ~~~~~~i~~~g~l~~Ll~lL~~~~~~~~~~a~~~L~~L~~~~~~~--~~~-~~~i~~Lv~lL~-~~d~~vr~~A~~aL~~ 425 (780)
T 2z6g_A 350 SSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQ--EGM-EGLLGTLVQLLG-SDDINVVTCAAGILSN 425 (780)
T ss_dssp TTHHHHHHHTTHHHHHGGGTTCSCHHHHHHHHHHHHHHHTTCTTC--SCC-HHHHHHHHHHTT-CSCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhchHHHHHHHHcCCchHHHHHHHHHHHHHhccchhh--hhh-hhHHHHHHHHHc-CCCHHHHHHHHHHHHH
Confidence 999999999999999999998775 89999999999999753221 111 234468999998 7889999999999999
Q ss_pred HhhCCHHHHHHHHhCCchHHHHHHhhc-CC-HHHHHHHHHHHHHHHh
Q 014196 308 LAHQSSEQRDKMAKSGIVHVSLQLALL-GS-PLAQRRASKLLQWFKD 352 (429)
Q Consensus 308 L~~~~~~~~~~i~~~G~v~~L~~ll~~-~~-~~~k~~A~~lL~~l~~ 352 (429)
|+..+++.++.+++.|+++.|+.++.. ++ +.++..|+++|+++..
T Consensus 426 L~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~v~~~Al~aL~nL~~ 472 (780)
T 2z6g_A 426 LTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTS 472 (780)
T ss_dssp HTSSCHHHHHHHHTTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTS
T ss_pred HHhCCHHHHHHHHHCCCHHHHHHHHHccCCHHHHHHHHHHHHHHHHh
Confidence 999888899999999999999999987 43 4899999999999974
No 32
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=99.91 E-value=1.3e-23 Score=227.99 Aligned_cols=279 Identities=15% Similarity=0.065 Sum_probs=241.6
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHH
Q 014196 71 CVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKA 150 (429)
Q Consensus 71 ~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~ 150 (429)
.+.++.|+..|.++++..+..|+..|.+++..++..+..+++.|+++.|+.+|.+++..+++.++.+|.+|+..+++++.
T Consensus 233 ~g~I~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~v~~~g~v~~Lv~lL~~~~~~v~~~a~~aL~~La~~~~e~~~ 312 (780)
T 2z6g_A 233 SGGIPALVNMLGSPVDSVLFHAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKL 312 (780)
T ss_dssp TTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred cCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCChhhHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHhcCChHHHH
Confidence 35789999999999999999999999999998888899999999999999999999999999999999999987767899
Q ss_pred HHHhcCccchhhhhccCCCHH-HHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCC
Q 014196 151 IMVEAGILTKLPKNVDAVDES-TRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVL 229 (429)
Q Consensus 151 ~iv~~G~i~~Lv~lL~~~~~~-~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~ 229 (429)
.+++.|+++.|+.+++..+.+ .++.++.+|++|+....++..+.+.|+++.|+.++.+++. ..++.|+++|.+|+...
T Consensus 313 ~i~~~~~i~~Lv~lL~~~~~~~~~~~a~~aL~~Ls~~~~~~~~i~~~g~l~~Ll~lL~~~~~-~~~~~a~~~L~~L~~~~ 391 (780)
T 2z6g_A 313 IILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQ-RLVQNCLWTLRNLSDAA 391 (780)
T ss_dssp HHHTTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSTTHHHHHHHTTHHHHHGGGTTCSCH-HHHHHHHHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHhhcChHHHHHHHHhchHHHHHHHHcCCch-HHHHHHHHHHHHHhccc
Confidence 999999999999999877644 4456778999999888888888899999999999998876 78999999999999765
Q ss_pred CChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCC-hhcHHHHhcCCCChHHHHHhcccCCC-hhHHHHHHHHHH
Q 014196 230 DNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVT-STGKKAMEDSPLVPESLIEILTWEEK-PKCQELSAYILM 306 (429)
Q Consensus 230 ~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~-~e~~~~i~~~~~i~~~Lv~~L~~~~s-~~~~e~A~~~L~ 306 (429)
... ....++++.|+.+|.+.+ .+++.|+.+|.+|+.. ++.+..+.+.|+++ .|+++|...++ +..++.|+.+|.
T Consensus 392 ~~~--~~~~~~i~~Lv~lL~~~d~~vr~~A~~aL~~L~~~~~~~~~~i~~~g~i~-~Lv~lL~~~~~~~~v~~~Al~aL~ 468 (780)
T 2z6g_A 392 TKQ--EGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIE-ALVRTVLRAGDREDITEPAICALR 468 (780)
T ss_dssp TTC--SCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTHHH-HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhh--hhhhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHH-HHHHHHHccCCHHHHHHHHHHHHH
Confidence 432 223589999999998776 8999999999999985 67888899888775 89999973233 389999999999
Q ss_pred HHhhCCH---HHHHHHHhCCchHHHHHHhhcCC-HHHHHHHHHHHHHHHhc
Q 014196 307 ILAHQSS---EQRDKMAKSGIVHVSLQLALLGS-PLAQRRASKLLQWFKDE 353 (429)
Q Consensus 307 ~L~~~~~---~~~~~i~~~G~v~~L~~ll~~~~-~~~k~~A~~lL~~l~~~ 353 (429)
+|+..++ ..+..+...|+++.|+.++..++ +.+++.|+|+|.++...
T Consensus 469 nL~~~~~~~~~~~~~v~~~~~l~~L~~lL~~~~~~~v~~~A~~aL~nLa~~ 519 (780)
T 2z6g_A 469 HLTSRHQDAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALC 519 (780)
T ss_dssp HTTSSSTTHHHHHHHHHHTTCHHHHHHTTSTTCCHHHHHHHHHHHHHHHSS
T ss_pred HHHhcCchHHHHHHHHHHcCCHHHHHHHhcCCChHHHHHHHHHHHHHHhcC
Confidence 9987543 24668888999999999999876 49999999999999853
No 33
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=99.91 E-value=9.7e-24 Score=191.96 Aligned_cols=195 Identities=19% Similarity=0.229 Sum_probs=178.1
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHH
Q 014196 72 VLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAI 151 (429)
Q Consensus 72 ~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~ 151 (429)
+..+.++..|.+++++.+..|+..|.+++..+++++..+.+.|++|.|+.+|.++++.+++.|+++|.||+.+++.++..
T Consensus 12 ~~~~~l~~LL~s~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 91 (210)
T 4db6_A 12 SELPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQA 91 (210)
T ss_dssp -CHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred chhHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHH
Confidence 34788999999999999999999999999888899999999999999999999999999999999999999877678999
Q ss_pred HHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccC-CCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccC-C
Q 014196 152 MVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLA-NTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAV-L 229 (429)
Q Consensus 152 iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~-~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~-~ 229 (429)
+++.|+++.|+.+|++.+...+..++.+|.+|+... +....+.+.|++|.|+++|.+++. .++..|+++|.||+.. +
T Consensus 92 i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~-~v~~~a~~aL~~l~~~~~ 170 (210)
T 4db6_A 92 VIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNE-QILQEALWALSNIASGGN 170 (210)
T ss_dssp HHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCH-HHHHHHHHHHHHHHTSCH
T ss_pred HHHCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHcCCCH-HHHHHHHHHHHHHHcCCc
Confidence 999999999999999999999999999999999654 344566789999999999999887 7999999999999987 6
Q ss_pred CChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhC
Q 014196 230 DNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVV 267 (429)
Q Consensus 230 ~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~ 267 (429)
+++..+++.|+++.|+.++.+.+ .+++.|+.+|.+|+.
T Consensus 171 ~~~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~aL~~l~~ 209 (210)
T 4db6_A 171 EQKQAVKEAGALEKLEQLQSHENEKIQKEAQEALEKLQS 209 (210)
T ss_dssp HHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHhc
Confidence 67788999999999999999776 899999999999975
No 34
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=99.90 E-value=5.5e-23 Score=216.75 Aligned_cols=280 Identities=11% Similarity=0.076 Sum_probs=230.9
Q ss_pred hHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHhhhch-------------------------------------H-HHHHH
Q 014196 70 DCVLLQKSVKRLHF-GSWEEKEMAAKEIEKLAKEDV-------------------------------------K-IKKLM 110 (429)
Q Consensus 70 ~~~~l~~lv~~L~~-~~~~~~~~Aa~~L~~La~~~~-------------------------------------~-~r~~i 110 (429)
+.+.++.|+..++. ++......++..|.+++...+ + ++..+
T Consensus 374 d~~~L~~Lv~llk~~~d~s~~Ygal~IL~NLt~~~~~~~~e~~~l~~Lk~~A~~~~p~~~~~d~~~~~~~~v~~~~~~~l 453 (778)
T 3opb_A 374 NESFTEILLTMIKSQKMTHCLYGLLVIMANLSTLPEEXXXXXXXXXXXXXXXXXXXPAADKVGAEKAAKEDILLFNEKYI 453 (778)
T ss_dssp CHHHHHHHHHHHTTTCCTTHHHHHHHHHHHTTCCCCCCCCCCC------------------CCTHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhCCCCchHHHHHHHHHHHhcCCCcccchhhhhhhhhhhhccccCcccCcccccccchHHHHHHHHHHH
Confidence 45568889999984 556677778888888875221 1 67788
Q ss_pred HhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHHHHhcCccchhhhhccCCCHH---HHHHHHHHHHHhhccC
Q 014196 111 AELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAVDES---TRHEFGELLLSLSSLA 187 (429)
Q Consensus 111 ~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~iv~~G~i~~Lv~lL~~~~~~---~~~~aa~~L~~Ls~~~ 187 (429)
.++|+||+|+.++.++++.+++.|+++|.||+.+. ++|..+++.|++++|+.++.+.... .++.|+.+|.+|....
T Consensus 454 ~eaGvIp~Lv~Ll~S~s~~~re~A~~aL~nLS~d~-~~R~~lvqqGal~~LL~lL~s~~~~~~~~k~~AA~ALArLlis~ 532 (778)
T 3opb_A 454 LRTELISFLKREMHNLSPNCKQQVVRIIYNITRSK-NFIPQLAQQGAVKIILEYLANKQDIGEPIRILGCRALTRMLIFT 532 (778)
T ss_dssp TTTTHHHHHHHHGGGSCHHHHHHHHHHHHHHHTSG-GGHHHHHHTTHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHTS
T ss_pred HHCcCHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH-HHHHHHHHCCCHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhcC
Confidence 89999999999999999999999999999999886 7999999999999999999877543 7889999999998766
Q ss_pred CCccccc---cCCcHHHHHHhhhcC-Cc-----------H-HHHHHHHHHHHHhccCCCC-----hhHHHhc-CcHHHHH
Q 014196 188 NTHIPLS---SSEILPFLVGILESG-SS-----------V-ETKELCIGALYNLSAVLDN-----ARPMVSN-GVVHTLL 245 (429)
Q Consensus 188 ~~~~~i~---~~g~i~~Lv~lL~~~-~~-----------~-~~~~~A~~aL~nLs~~~~n-----~~~iv~~-G~v~~Lv 245 (429)
+....+. ..|+||+|+.+|..+ .. . -.+..|+.||.||+..++| +..++.. |++|.|.
T Consensus 533 np~~~f~~~~~~~aI~pLv~LL~~~~~~~~~~l~~~~~~~~l~~feAL~ALTNLAs~~~n~~E~~r~~Ii~~~ga~~~L~ 612 (778)
T 3opb_A 533 NPGLIFKKYSALNAIPFLFELLPRSTPVDDNPLHNDEQIKLTDNYEALLALTNLASSETSDGEEVCKHIVSTKVYWSTIE 612 (778)
T ss_dssp CHHHHSSSSCSTTHHHHHHHTSCCSSSCSSCC---CCCCCHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHSHHHHHHHH
T ss_pred CHHHHcCCCccccchHHHHHHcCCCCCcccccccccccccHHHHHHHHHHHHHHhcCCcccchHHHHHHHHhcCHHHHHH
Confidence 5444443 149999999999832 11 0 1266899999999998744 6778885 9999999
Q ss_pred HhccCCc-chHHHHHHHHHHhhCChhcH-HHHhcCC------CChHHHHHhcccCCChhHHHHHHHHHHHHhhCCHHHHH
Q 014196 246 KLCSMKE-RLSEKSLATLGNLVVTSTGK-KAMEDSP------LVPESLIEILTWEEKPKCQELSAYILMILAHQSSEQRD 317 (429)
Q Consensus 246 ~lL~~~~-~~~~~a~~~L~~La~~~e~~-~~i~~~~------~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~~~~~~~~ 317 (429)
.+|.+.. .+++.|+.++.||+.+++++ +.+.+.+ ++ +.||.++. .++...|+.|.++|.+++..++..++
T Consensus 613 ~LL~s~n~~VrrAA~elI~NL~~~~e~i~~k~~~~~~~~~~~rL-~lLV~Ll~-s~D~~~r~AAagALAnLts~~~~ia~ 690 (778)
T 3opb_A 613 NLMLDENVPLQRSTLELISNMMSHPLTIAAKFFNLENPQSLRNF-NILVKLLQ-LSDVESQRAVAAIFANIATTIPLIAK 690 (778)
T ss_dssp HGGGCSSHHHHHHHHHHHHHHHTSGGGTGGGTSCCSSHHHHHHH-HHHHHGGG-CSCHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHHhCCcHHHHHHHHhhcCchhhccH-HHHHHHHc-CCCHHHHHHHHHHHHHhcCCChHHHH
Confidence 9998654 88999999999999999886 4665433 13 37999998 79999999999999999877788888
Q ss_pred HHHhC-CchHHHHHHhhc--CCHHHHHHHHHHHHHHHh
Q 014196 318 KMAKS-GIVHVSLQLALL--GSPLAQRRASKLLQWFKD 352 (429)
Q Consensus 318 ~i~~~-G~v~~L~~ll~~--~~~~~k~~A~~lL~~l~~ 352 (429)
.+++. |+++.|+.+++. +++..+.+++.++.+|..
T Consensus 691 ~ll~~~~gi~~Ll~lL~~~~~~~~l~~R~~~~l~NL~~ 728 (778)
T 3opb_A 691 ELLTKKELIENAIQVFADQIDDIELRQRLLMLFFGLFE 728 (778)
T ss_dssp HHTTCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHT
T ss_pred HHHHccccHHHHHHHHhccCCCHHHHHHHHHHHHHHHH
Confidence 89997 799999999999 799999999999999996
No 35
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=99.89 E-value=8.5e-23 Score=185.70 Aligned_cols=196 Identities=19% Similarity=0.234 Sum_probs=175.2
Q ss_pred hcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhcc-CCCc
Q 014196 112 ELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSL-ANTH 190 (429)
Q Consensus 112 ~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~-~~~~ 190 (429)
..|+.+.|+.+|.++|++++..|+++|.+++.+++.++..+++.|+++.|+.+|.+.+.+.++.++.+|.+|+.. ++++
T Consensus 10 ~~~~~~~l~~LL~s~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~ 89 (210)
T 4db6_A 10 HGSELPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQI 89 (210)
T ss_dssp ---CHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHH
T ss_pred ccchhHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHH
Confidence 468899999999999999999999999999987767899999999999999999999999999999999999954 4667
Q ss_pred cccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCCC-ChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCC
Q 014196 191 IPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVLD-NARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVT 268 (429)
Q Consensus 191 ~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~-n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~ 268 (429)
..+.+.|++|.|+.+|.+++. .++..|+++|.||+.+.. ++..+++.|+++.|+.+|.+.+ .+++.|+.+|.+|+..
T Consensus 90 ~~i~~~g~i~~L~~lL~~~~~-~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~ 168 (210)
T 4db6_A 90 QAVIDAGALPALVQLLSSPNE-QILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASG 168 (210)
T ss_dssp HHHHHTTCHHHHHHHTTCSCH-HHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTS
T ss_pred HHHHHCCCHHHHHHHHcCCcH-HHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcC
Confidence 778899999999999999987 799999999999997544 4578899999999999999776 8999999999999986
Q ss_pred -hhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHHHhh
Q 014196 269 -STGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMILAH 310 (429)
Q Consensus 269 -~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~ 310 (429)
++.+..+.+.|+++ .|++++. ++++..++.|+.+|.+++.
T Consensus 169 ~~~~~~~~~~~g~i~-~L~~ll~-~~~~~v~~~a~~aL~~l~~ 209 (210)
T 4db6_A 169 GNEQKQAVKEAGALE-KLEQLQS-HENEKIQKEAQEALEKLQS 209 (210)
T ss_dssp CHHHHHHHHHTTHHH-HHHHGGG-CSCHHHHHHHHHHHHHHCC
T ss_pred CcHHHHHHHHCCCHH-HHHHHHh-CCCHHHHHHHHHHHHHHhc
Confidence 88888898987765 8999998 7899999999999999875
No 36
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=99.87 E-value=1.6e-21 Score=187.40 Aligned_cols=199 Identities=17% Similarity=0.174 Sum_probs=173.6
Q ss_pred hhhHHHHHHHHHHhcCC------------CHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHH-hhcCCCHHHHHHH
Q 014196 68 EDDCVLLQKSVKRLHFG------------SWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVS-MVSTEVIGRRRAA 134 (429)
Q Consensus 68 ~~~~~~l~~lv~~L~~~------------~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~-lL~s~~~~~~~~A 134 (429)
+.+...++..+.-|.++ +.+.+..|+..|..++. +.+++..+++.|++|+||. +|.++++.+++.|
T Consensus 24 ~d~~~~mk~~l~vl~~~~~~~~~~~~~~~~~e~k~~Al~~L~~lv~-~~dna~~~~~~G~l~~Lv~~lL~s~~~~vr~~A 102 (296)
T 1xqr_A 24 RGEVEQMKSCLRVLSQPMPPTAGEAEQAADQQEREGALELLADLCE-NMDNAADFCQLSGMHLLVGRYLEAGAAGLRWRA 102 (296)
T ss_dssp HHHHHHHHHHHHHHHSCCCSSCCHHHHHHHHHHHHHHHHHHHHHHT-SHHHHHHHHHTTHHHHHHHTTTTCSSHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCcccccccccCCCHHHHHHHHHHHHHHHh-ChhhHHHHHHcCCHHHHHHHHHcCCCHHHHHHH
Confidence 34566678888888764 23678889999999997 5578999999999999999 9999999999999
Q ss_pred HHHHHHhccCCCchHHHHHhcCccchhhhhccC-CCHHHHHHHHHHHHHhhccC-CCccccccCCcHHHHHHhhhcCCcH
Q 014196 135 IKALIQLANGTYTNKAIMVEAGILTKLPKNVDA-VDESTRHEFGELLLSLSSLA-NTHIPLSSSEILPFLVGILESGSSV 212 (429)
Q Consensus 135 ~~aL~nLa~~~~~nk~~iv~~G~i~~Lv~lL~~-~~~~~~~~aa~~L~~Ls~~~-~~~~~i~~~g~i~~Lv~lL~~~~~~ 212 (429)
+|+|.|++.+++.++..+++.|++|+|+.+|.+ .+...++.|+++|.+|+... .....+.+.|++|.|+.+|.+++.
T Consensus 103 a~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~~d~- 181 (296)
T 1xqr_A 103 AQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQ- 181 (296)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCH-
T ss_pred HHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHcCCCH-
Confidence 999999999987789999999999999999985 47889999999999998654 334567788999999999999887
Q ss_pred HHHHHHHHHHHHhccC-CCChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCC
Q 014196 213 ETKELCIGALYNLSAV-LDNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVT 268 (429)
Q Consensus 213 ~~~~~A~~aL~nLs~~-~~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~ 268 (429)
.++..|+++|.||+.. ++.+..+++.|++++|+.+|..++ .+++.++.+|.+|+..
T Consensus 182 ~v~~~A~~aLs~L~~~~~~~~~~vv~~g~i~~Lv~LL~~~d~~v~~~al~aL~~l~~~ 239 (296)
T 1xqr_A 182 KLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVRTEHSPFHEHVLGALCSLVTD 239 (296)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHHHTSCCSTHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhCChHHHHHHHHcCCHHHHHHHHcCCChhHHHHHHHHHHHHHhC
Confidence 8999999999999975 557789999999999999999776 9999999999999985
No 37
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=99.83 E-value=8e-20 Score=192.77 Aligned_cols=314 Identities=11% Similarity=0.111 Sum_probs=241.6
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHh-cCcHHHHHHhhcC-CCHHHHHHHHHHHHHhccCCCc-
Q 014196 71 CVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAE-LGVIQMLVSMVST-EVIGRRRAAIKALIQLANGTYT- 147 (429)
Q Consensus 71 ~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~-~G~i~~Lv~lL~s-~~~~~~~~A~~aL~nLa~~~~~- 147 (429)
....+.+++.|..++.+.+..|+..|.-++. +++.|..+++ .|+++.|+.+++. ++..+.-.++.+|.||+...+.
T Consensus 333 ~~La~~~~~~L~~~~~~~~~~AvEgLaYLSl-~~~VKe~L~~d~~~L~~Lv~llk~~~d~s~~Ygal~IL~NLt~~~~~~ 411 (778)
T 3opb_A 333 KQLSEIFINAISRRIVPKVEMSVEALAYLSL-KASVKIMIRSNESFTEILLTMIKSQKMTHCLYGLLVIMANLSTLPEEX 411 (778)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHHTT-SSHHHHHHHHCHHHHHHHHHHHTTTCCTTHHHHHHHHHHHTTCCCCCC
T ss_pred HHHHHHHHHHHhcCCccHHHHHHHHHHHHhC-CHHHHHHHHhCHHHHHHHHHHHhCCCCchHHHHHHHHHHHhcCCCccc
Confidence 3467788888888777778899999999987 5678988887 5779999999995 7788999999999999763321
Q ss_pred -------------------------------------hHHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCc
Q 014196 148 -------------------------------------NKAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTH 190 (429)
Q Consensus 148 -------------------------------------nk~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~ 190 (429)
++..+.++|+||+|+.++.+.+...++.++++|.+||.+.+++
T Consensus 412 ~~e~~~l~~Lk~~A~~~~p~~~~~d~~~~~~~~v~~~~~~~l~eaGvIp~Lv~Ll~S~s~~~re~A~~aL~nLS~d~~~R 491 (778)
T 3opb_A 412 XXXXXXXXXXXXXXXXXXPAADKVGAEKAAKEDILLFNEKYILRTELISFLKREMHNLSPNCKQQVVRIIYNITRSKNFI 491 (778)
T ss_dssp CCCCC------------------CCTHHHHHHHHHHHHHHHTTTTTHHHHHHHHGGGSCHHHHHHHHHHHHHHHTSGGGH
T ss_pred chhhhhhhhhhhhccccCcccCcccccccchHHHHHHHHHHHHHCcCHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH
Confidence 4567778999999999999999999999999999999998999
Q ss_pred cccccCCcHHHHHHhhhcCCcH--HHHHHHHHHHHHhccCCCChhHHH--h-cCcHHHHHHhccC-Cc-c----------
Q 014196 191 IPLSSSEILPFLVGILESGSSV--ETKELCIGALYNLSAVLDNARPMV--S-NGVVHTLLKLCSM-KE-R---------- 253 (429)
Q Consensus 191 ~~i~~~g~i~~Lv~lL~~~~~~--~~~~~A~~aL~nLs~~~~n~~~iv--~-~G~v~~Lv~lL~~-~~-~---------- 253 (429)
..+...|++++|+++|.+++.. .++..|+.||.+|....+....+- + .|+||+|+.+|.. ++ .
T Consensus 492 ~~lvqqGal~~LL~lL~s~~~~~~~~k~~AA~ALArLlis~np~~~f~~~~~~~aI~pLv~LL~~~~~~~~~~l~~~~~~ 571 (778)
T 3opb_A 492 PQLAQQGAVKIILEYLANKQDIGEPIRILGCRALTRMLIFTNPGLIFKKYSALNAIPFLFELLPRSTPVDDNPLHNDEQI 571 (778)
T ss_dssp HHHHHTTHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHTSCHHHHSSSSCSTTHHHHHHHTSCCSSSCSSCC---CCCC
T ss_pred HHHHHCCCHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhcCCHHHHcCCCccccchHHHHHHcCCCCCcccccccccccc
Confidence 9999999999999999988642 279999999999986554333221 1 3999999999983 22 1
Q ss_pred --h-HHHHHHHHHHhhCCh-----hcHHHHhcC-CCChHHHHHhcccCCChhHHHHHHHHHHHHhhCCHHHH-HHHHhCC
Q 014196 254 --L-SEKSLATLGNLVVTS-----TGKKAMEDS-PLVPESLIEILTWEEKPKCQELSAYILMILAHQSSEQR-DKMAKSG 323 (429)
Q Consensus 254 --~-~~~a~~~L~~La~~~-----e~~~~i~~~-~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~~~~~~~-~~i~~~G 323 (429)
. +..|+.+|.||+..+ +.|+.|+++ |++ +.|+++|. +++...|+.|+.++.+|+.. ++.+ +.+...+
T Consensus 572 ~~l~~feAL~ALTNLAs~~~n~~E~~r~~Ii~~~ga~-~~L~~LL~-s~n~~VrrAA~elI~NL~~~-~e~i~~k~~~~~ 648 (778)
T 3opb_A 572 KLTDNYEALLALTNLASSETSDGEEVCKHIVSTKVYW-STIENLML-DENVPLQRSTLELISNMMSH-PLTIAAKFFNLE 648 (778)
T ss_dssp CHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHSHHHH-HHHHHGGG-CSSHHHHHHHHHHHHHHHTS-GGGTGGGTSCCS
T ss_pred cHHHHHHHHHHHHHHhcCCcccchHHHHHHHHhcCHH-HHHHHHHh-CCCHHHHHHHHHHHHHHhCC-cHHHHHHHHhhc
Confidence 1 668999999999975 458888886 665 59999998 78899999999999999974 4433 3443322
Q ss_pred ------chHHHHHHhhcCCHHHHHHHHHHHHHHH-hcccc-C-CCCCCCCCcccc----ccCC--CCChhhhHHHHHHHH
Q 014196 324 ------IVHVSLQLALLGSPLAQRRASKLLQWFK-DERQA-K-MGPHSGPQTRRV----SIGS--PVSPREAQEGKKMMK 388 (429)
Q Consensus 324 ------~v~~L~~ll~~~~~~~k~~A~~lL~~l~-~~~~~-~-~~~~~~~~~~~~----~~~~--~~~~~~~~~~k~~l~ 388 (429)
.++.|+.++..++..+|+.|+|+|.++. ..+.. + ... ..+.+ .+.. .++++++.++-..+.
T Consensus 649 ~~~~~~rL~lLV~Ll~s~D~~~r~AAagALAnLts~~~~ia~~ll~----~~~gi~~Ll~lL~~~~~~~~l~~R~~~~l~ 724 (778)
T 3opb_A 649 NPQSLRNFNILVKLLQLSDVESQRAVAAIFANIATTIPLIAKELLT----KKELIENAIQVFADQIDDIELRQRLLMLFF 724 (778)
T ss_dssp SHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHCHHHHHHHTT----CHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred CchhhccHHHHHHHHcCCCHHHHHHHHHHHHHhcCCChHHHHHHHH----ccccHHHHHHHHhccCCCHHHHHHHHHHHH
Confidence 3789999999999999999999999995 43331 1 110 00111 1111 246677777777777
Q ss_pred HHHH
Q 014196 389 NLVQ 392 (429)
Q Consensus 389 ~~~~ 392 (429)
+|+.
T Consensus 725 NL~~ 728 (778)
T 3opb_A 725 GLFE 728 (778)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 7764
No 38
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=99.81 E-value=4.7e-19 Score=170.24 Aligned_cols=222 Identities=17% Similarity=0.096 Sum_probs=179.9
Q ss_pred HHHHHHHHHHHHHhccCCCchHHHHHhcCccchhhh-hccCCCHHHHHHHHHHHHHhhccC-CCccccccCCcHHHHHHh
Q 014196 128 IGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPK-NVDAVDESTRHEFGELLLSLSSLA-NTHIPLSSSEILPFLVGI 205 (429)
Q Consensus 128 ~~~~~~A~~aL~nLa~~~~~nk~~iv~~G~i~~Lv~-lL~~~~~~~~~~aa~~L~~Ls~~~-~~~~~i~~~g~i~~Lv~l 205 (429)
.+.+..|+..|.+++.+. +|...+++.|++|+|+. +|.+++.++++.|+++|.+++.++ ..+..+.+.|++|+|+++
T Consensus 54 ~e~k~~Al~~L~~lv~~~-dna~~~~~~G~l~~Lv~~lL~s~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~L 132 (296)
T 1xqr_A 54 QQEREGALELLADLCENM-DNAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRL 132 (296)
T ss_dssp HHHHHHHHHHHHHHHTSH-HHHHHHHHTTHHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCh-hhHHHHHHcCCHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHH
Confidence 457888999999999886 58889999999999999 999999999999999999999765 466778899999999999
Q ss_pred hhcCCcHHHHHHHHHHHHHhccCCC-ChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhC-ChhcHHHHhcCCCCh
Q 014196 206 LESGSSVETKELCIGALYNLSAVLD-NARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVV-TSTGKKAMEDSPLVP 282 (429)
Q Consensus 206 L~~~~~~~~~~~A~~aL~nLs~~~~-n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~-~~e~~~~i~~~~~i~ 282 (429)
|.++....+++.|+++|.||+.+.. ....++++|++|.|+.+|.+++ .++.+|+.+|.+|+. +++.+..+++.|+++
T Consensus 133 L~~~~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~~~~~~~~vv~~g~i~ 212 (296)
T 1xqr_A 133 LDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQ 212 (296)
T ss_dssp HHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHH
T ss_pred HccCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCChHHHHHHHHcCCHH
Confidence 9975334799999999999998654 4568889999999999999876 899999999999987 688899999987775
Q ss_pred HHHHHhcccCCChhHHHHHHHHHHHHhhCCHHHHHHHHhCC-chHHH----HHHhhcC--CHHHHHHHHHHHHHHHh
Q 014196 283 ESLIEILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSG-IVHVS----LQLALLG--SPLAQRRASKLLQWFKD 352 (429)
Q Consensus 283 ~~Lv~~L~~~~s~~~~e~A~~~L~~L~~~~~~~~~~i~~~G-~v~~L----~~ll~~~--~~~~k~~A~~lL~~l~~ 352 (429)
.|+++|. +.++..+++|+.+|.+|+...+.........+ .+..+ .+-++.. .....++|..++..+-.
T Consensus 213 -~Lv~LL~-~~d~~v~~~al~aL~~l~~~~~~~~~~~~~~~~~l~~lL~~~~~~lq~~e~~~e~~~~~~~il~~~f~ 287 (296)
T 1xqr_A 213 -QLVALVR-TEHSPFHEHVLGALCSLVTDFPQGVRECREPELGLEELLRHRCQLLQQHEEYQEELEFCEKLLQTCFS 287 (296)
T ss_dssp -HHHHHHT-SCCSTHHHHHHHHHHHHHTTCHHHHHHHHCGGGCHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHCC
T ss_pred -HHHHHHc-CCChhHHHHHHHHHHHHHhCChhHHHHHhccHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHcC
Confidence 8999998 78899999999999999987655444333211 12222 2223322 35677788888876664
No 39
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=99.57 E-value=1.7e-13 Score=141.36 Aligned_cols=276 Identities=13% Similarity=0.122 Sum_probs=213.5
Q ss_pred hhHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcC--CCHHHHHHHHHHHHHhccCC
Q 014196 69 DDCVLLQKSVKRLHFG-SWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVST--EVIGRRRAAIKALIQLANGT 145 (429)
Q Consensus 69 ~~~~~l~~lv~~L~~~-~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s--~~~~~~~~A~~aL~nLa~~~ 145 (429)
...+.|+.|+.+|.+. -.+.|+.|+..|+.++++- |..+ ..++++.|+..|+. .|.++...++.+|.++-..+
T Consensus 18 s~~etI~~L~~Rl~~~tl~eDRR~Av~~Lk~~sk~y---~~~V-g~~~l~~li~~L~~d~~D~e~v~~~LetL~~l~~~~ 93 (651)
T 3grl_A 18 TEAETIQKLCDRVASSTLLDDRRNAVRALKSLSKKY---RLEV-GIQAMEHLIHVLQTDRSDSEIIGYALDTLYNIISND 93 (651)
T ss_dssp CHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHTTTTT---TTHH-HHHTHHHHHHHHHSCTTCHHHHHHHHHHHHHHHCCC
T ss_pred ChhhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHh---HHHh-hhhhHHHHHHHHhcccccHHHHHHHHHHHHHHhCCC
Confidence 4567899999999976 5799999999999999743 4444 45679999999987 47889999999999876544
Q ss_pred Cc-----------------hHHH-HHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCC--Cccccc-cCCcHHHHHH
Q 014196 146 YT-----------------NKAI-MVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLAN--THIPLS-SSEILPFLVG 204 (429)
Q Consensus 146 ~~-----------------nk~~-iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~--~~~~i~-~~g~i~~Lv~ 204 (429)
+. +... +.+.+.|+.|+.+|++.+...|.++..+|..|+.... ++..|. ..++|+.|+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~d~f~~~~~~i~~Ll~lL~~~df~vR~~alqlL~~L~~~r~~~~Q~~Il~~p~gi~~Lv~ 173 (651)
T 3grl_A 94 EEEEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMD 173 (651)
T ss_dssp --------------CHHHHHHHHHHHSTHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHG
T ss_pred CcccccccccccchHHHHHHHHHHHcCCccHHHHHHHhcCccHHHHHHHHHHHHHHHhcCcHHHHHHHHhCcccHHHHHH
Confidence 22 1112 2356889999999999999999999999999986652 455566 5699999999
Q ss_pred hhhcCCcHHHHHHHHHHHHHhccCCCChhHHHhc-CcHHHHHHhccCC-----cchHHHHHHHHHHhhC-ChhcHHHHhc
Q 014196 205 ILESGSSVETKELCIGALYNLSAVLDNARPMVSN-GVVHTLLKLCSMK-----ERLSEKSLATLGNLVV-TSTGKKAMED 277 (429)
Q Consensus 205 lL~~~~~~~~~~~A~~aL~nLs~~~~n~~~iv~~-G~v~~Lv~lL~~~-----~~~~~~a~~~L~~La~-~~e~~~~i~~ 277 (429)
+|.+... .+|..++..|.+|+.+..+.++++.. |+|+.|+.++... +.+++.|+.+|.+|.. ++.++..+.+
T Consensus 174 lL~d~rE-~iRneallLL~~Lt~~n~~iQklVAFEnaFe~Lf~Ii~~Eg~~~Ggivv~DCL~ll~nLLr~N~sNQ~~FrE 252 (651)
T 3grl_A 174 LLADSRE-VIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIITEEGNSDGGIVVEDCLILLQNLLKNNNSNQNFFKE 252 (651)
T ss_dssp GGGCSSH-HHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHHTGGGSHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHhCchH-HHHHHHHHHHHHHhcCCHHHHHHHHHhccHHHHHHHHHhcCCCccchhHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 9998775 78999999999999998888877776 9999999999742 2689999999999998 6778899999
Q ss_pred CCCChHHHHHhcccCCChh------HHHH---HHHHHHHHhhC------CHHHHHHHHhCCchHHHHHHhhcC--CHHHH
Q 014196 278 SPLVPESLIEILTWEEKPK------CQEL---SAYILMILAHQ------SSEQRDKMAKSGIVHVSLQLALLG--SPLAQ 340 (429)
Q Consensus 278 ~~~i~~~Lv~~L~~~~s~~------~~e~---A~~~L~~L~~~------~~~~~~~i~~~G~v~~L~~ll~~~--~~~~k 340 (429)
.++++ .|..++. .+.+. ...+ +..++.-++.. +..++..+.+.|+++.|++++... ...++
T Consensus 253 t~~i~-~L~~LL~-~~~~~~~W~~Qk~~N~~~~L~iIrlLv~~~~~~~~t~~nQ~~~~~~g~l~~Ll~ll~~~~~p~~i~ 330 (651)
T 3grl_A 253 GSYIQ-RMKPWFE-VGDENSGWSAQKVTNLHLMLQLVRVLVSPNNPPGATSSCQKAMFQCGLLQQLCTILMATGVPADIL 330 (651)
T ss_dssp TTCGG-GGGGGGC-CCSCSSCCCHHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHTTHHHHHHHHHTCSSCCHHHH
T ss_pred cCCHH-HHHHHhC-CCccccccHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHCCCHHHHHHHHccCCCCHHHH
Confidence 88776 8999886 22211 1222 33444444443 246788999999999999998864 56777
Q ss_pred HHHHHHHHHHH
Q 014196 341 RRASKLLQWFK 351 (429)
Q Consensus 341 ~~A~~lL~~l~ 351 (429)
..|...+..+-
T Consensus 331 ~~Al~tla~~i 341 (651)
T 3grl_A 331 TETINTVSEVI 341 (651)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77776655444
No 40
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=99.44 E-value=9.6e-12 Score=128.40 Aligned_cols=286 Identities=15% Similarity=0.080 Sum_probs=211.7
Q ss_pred CCChhhHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHhhhchH-----------------HHHHH-HhcCcHHHHHHhhc
Q 014196 65 DIEEDDCVLLQKSVKRLHFG--SWEEKEMAAKEIEKLAKEDVK-----------------IKKLM-AELGVIQMLVSMVS 124 (429)
Q Consensus 65 ~~~~~~~~~l~~lv~~L~~~--~~~~~~~Aa~~L~~La~~~~~-----------------~r~~i-~~~G~i~~Lv~lL~ 124 (429)
+.......+++.++..|+.. |.+.-+.++..|.++...++. +...+ .+.+.|+.|+.+|+
T Consensus 53 y~~~Vg~~~l~~li~~L~~d~~D~e~v~~~LetL~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~~~~i~~Ll~lL~ 132 (651)
T 3grl_A 53 YRLEVGIQAMEHLIHVLQTDRSDSEIIGYALDTLYNIISNDEEEEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLE 132 (651)
T ss_dssp TTTHHHHHTHHHHHHHHHSCTTCHHHHHHHHHHHHHHHCCC--------------CHHHHHHHHHHHSTHHHHHHHHHTT
T ss_pred hHHHhhhhhHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcccccccccccchHHHHHHHHHHHcCCccHHHHHHHhc
Confidence 33344456788999999865 666677788888765533221 22333 45788999999999
Q ss_pred CCCHHHHHHHHHHHHHhccCCCc-hHHHHHhc-CccchhhhhccCCCHHHHHHHHHHHHHhhccCC-CccccccCCcHHH
Q 014196 125 TEVIGRRRAAIKALIQLANGTYT-NKAIMVEA-GILTKLPKNVDAVDESTRHEFGELLLSLSSLAN-THIPLSSSEILPF 201 (429)
Q Consensus 125 s~~~~~~~~A~~aL~nLa~~~~~-nk~~iv~~-G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~-~~~~i~~~g~i~~ 201 (429)
++|..++.+++..|..|+.+... ++..|..+ ++|+.|+.+|.......|-++..+|.+|+.... .+..++-.|+++.
T Consensus 133 ~~df~vR~~alqlL~~L~~~r~~~~Q~~Il~~p~gi~~Lv~lL~d~rE~iRneallLL~~Lt~~n~~iQklVAFEnaFe~ 212 (651)
T 3grl_A 133 EFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFER 212 (651)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGGCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHH
T ss_pred CccHHHHHHHHHHHHHHHhcCcHHHHHHHHhCcccHHHHHHHHhCchHHHHHHHHHHHHHHhcCCHHHHHHHHHhccHHH
Confidence 99999999999999999877644 67888855 999999999998888888889999999997764 4555667899999
Q ss_pred HHHhhhcCCc---HHHHHHHHHHHHHhccC-CCChhHHHhcCcHHHHHHhccCCcc-------hHHH---HHHHHHHhhC
Q 014196 202 LVGILESGSS---VETKELCIGALYNLSAV-LDNARPMVSNGVVHTLLKLCSMKER-------LSEK---SLATLGNLVV 267 (429)
Q Consensus 202 Lv~lL~~~~~---~~~~~~A~~aL~nLs~~-~~n~~~iv~~G~v~~Lv~lL~~~~~-------~~~~---a~~~L~~La~ 267 (429)
|+.++..... ..+..+|+..|.||..+ +.|+..+.|.|++|.|..+|...++ ...+ ++.++.-|+.
T Consensus 213 Lf~Ii~~Eg~~~Ggivv~DCL~ll~nLLr~N~sNQ~~FrEt~~i~~L~~LL~~~~~~~~W~~Qk~~N~~~~L~iIrlLv~ 292 (651)
T 3grl_A 213 LLDIITEEGNSDGGIVVEDCLILLQNLLKNNNSNQNFFKEGSYIQRMKPWFEVGDENSGWSAQKVTNLHLMLQLVRVLVS 292 (651)
T ss_dssp HHHHHHHHTGGGSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCGGGGGGGGCCCSCSSCCCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhcCCCccchhHHHHHHHHHHHHhcCHHHHHHHHHcCCHHHHHHHhCCCccccccHHHHHHHHHHHHHHHHHHhC
Confidence 9999986321 14778999999999985 4588999999999999999874321 2233 4555555554
Q ss_pred C-------hhcHHHHhcCCCChHHHHHhcccCC-ChhHHHHHHHHHHHHhhCCHHHHHHHHhCC-----chHHHHHH---
Q 014196 268 T-------STGKKAMEDSPLVPESLIEILTWEE-KPKCQELSAYILMILAHQSSEQRDKMAKSG-----IVHVSLQL--- 331 (429)
Q Consensus 268 ~-------~e~~~~i~~~~~i~~~Lv~~L~~~~-s~~~~e~A~~~L~~L~~~~~~~~~~i~~~G-----~v~~L~~l--- 331 (429)
. +.++.++.+.|++. .|++++...+ ....+..|+.++..+.++++..++.+.+.. ..|.++.+
T Consensus 293 ~~~~~~~t~~nQ~~~~~~g~l~-~Ll~ll~~~~~p~~i~~~Al~tla~~irgN~~~Q~~fa~~~vp~~~~~p~li~lL~~ 371 (651)
T 3grl_A 293 PNNPPGATSSCQKAMFQCGLLQ-QLCTILMATGVPADILTETINTVSEVIRGCQVNQDYFASVNAPSNPPRPAIVVLLMS 371 (651)
T ss_dssp TTSCHHHHHHHHHHHHHTTHHH-HHHHHHTCSSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHCEESSSSCEEHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHCCCHH-HHHHHHccCCCCHHHHHHHHHHHHHHHhCCHHHHHHHhhccCCCCCCcChHHHHHHH
Confidence 2 24577888877765 8999887222 456788899999999998898888887753 23445544
Q ss_pred -hhc-CCHHHHHHHHHHHHHHH
Q 014196 332 -ALL-GSPLAQRRASKLLQWFK 351 (429)
Q Consensus 332 -l~~-~~~~~k~~A~~lL~~l~ 351 (429)
+.+ .....|-.|+..++++-
T Consensus 372 ~~~~~~~~~lR~Aa~~cl~ay~ 393 (651)
T 3grl_A 372 MVNERQPFVLRCAVLYCFQCFL 393 (651)
T ss_dssp HTCTTSCHHHHHHHHHHHHHHH
T ss_pred HhcccccHHHHHHHHHHHHHHH
Confidence 433 35677777777877765
No 41
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=99.36 E-value=2.4e-11 Score=114.91 Aligned_cols=225 Identities=9% Similarity=-0.001 Sum_probs=172.4
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHHH
Q 014196 73 LLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIM 152 (429)
Q Consensus 73 ~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~i 152 (429)
.++.++..|.++++.++..|+..|..+.. .++++.|+.+|.++++.++..|+++|..+....+ ....
T Consensus 24 ~i~~L~~~L~~~~~~vr~~A~~~L~~~~~-----------~~~~~~L~~~l~d~~~~vR~~A~~aL~~l~~~~~-~~~~- 90 (280)
T 1oyz_A 24 NDDELFRLLDDHNSLKRISSARVLQLRGG-----------QDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKK-CEDN- 90 (280)
T ss_dssp CHHHHHHHTTCSSHHHHHHHHHHHHHHCC-----------HHHHHHHHHHHTCSSHHHHHHHHHHHHHSCCCTT-THHH-
T ss_pred hHHHHHHHHHcCCHHHHHHHHHHHHccCC-----------chHHHHHHHHHcCCCHHHHHHHHHHHHHhccccc-cchH-
Confidence 47899999999999999999999998762 2358999999999999999999999999875532 2111
Q ss_pred HhcCccchhh-hhccCCCHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCCCC
Q 014196 153 VEAGILTKLP-KNVDAVDESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVLDN 231 (429)
Q Consensus 153 v~~G~i~~Lv-~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~n 231 (429)
.++.|. .+++..+..++..++.+|..+..... .....+++.|+.++.+++. .++..|+.+|.++..
T Consensus 91 ----l~~~L~~~~~~d~~~~vr~~a~~aL~~l~~~~~----~~~~~~~~~L~~~l~d~~~-~vR~~a~~aL~~~~~---- 157 (280)
T 1oyz_A 91 ----VFNILNNMALNDKSACVRATAIESTAQRCKKNP----IYSPKIVEQSQITAFDKST-NVRRATAFAISVIND---- 157 (280)
T ss_dssp ----HHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHCG----GGHHHHHHHHHHHTTCSCH-HHHHHHHHHHHTC------
T ss_pred ----HHHHHHHHHhcCCCHHHHHHHHHHHHHHhccCC----cccHHHHHHHHHHhhCCCH-HHHHHHHHHHHhcCC----
Confidence 233333 24567778899999999999874321 1123468999999998887 799999999988753
Q ss_pred hhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCChhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHHHhh
Q 014196 232 ARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMILAH 310 (429)
Q Consensus 232 ~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~ 310 (429)
.++++.|+.++.+++ .++..++.+|..+.... ..+.+.|++++. +.++.++..|+.+|..+.
T Consensus 158 ------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~~~---------~~~~~~L~~~l~-d~~~~vR~~A~~aL~~~~- 220 (280)
T 1oyz_A 158 ------KATIPLLINLLKDPNGDVRNWAAFAININKYDN---------SDIRDCFVEMLQ-DKNEEVRIEAIIGLSYRK- 220 (280)
T ss_dssp -------CCHHHHHHHHTCSSHHHHHHHHHHHHHHTCCC---------HHHHHHHHHHTT-CSCHHHHHHHHHHHHHTT-
T ss_pred ------HHHHHHHHHHHcCCCHHHHHHHHHHHHhhccCc---------HHHHHHHHHHhc-CCCHHHHHHHHHHHHHhC-
Confidence 358999999999876 78889999998874321 112347899998 788999999999998875
Q ss_pred CCHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHh
Q 014196 311 QSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKD 352 (429)
Q Consensus 311 ~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~ 352 (429)
...+++.|+.++.+.+ ++..|.+.|..+++
T Consensus 221 ----------~~~~~~~L~~~l~d~~--vr~~a~~aL~~i~~ 250 (280)
T 1oyz_A 221 ----------DKRVLSVLCDELKKNT--VYDDIIEAAGELGD 250 (280)
T ss_dssp ----------CGGGHHHHHHHHTSSS--CCHHHHHHHHHHCC
T ss_pred ----------CHhhHHHHHHHhcCcc--HHHHHHHHHHhcCc
Confidence 2357899999998754 78888888888765
No 42
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=99.27 E-value=1.2e-10 Score=105.21 Aligned_cols=186 Identities=17% Similarity=0.129 Sum_probs=151.2
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHH
Q 014196 71 CVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKA 150 (429)
Q Consensus 71 ~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~ 150 (429)
...++.++..|.++++.++..|+..|..+.. .++++.|+.+|.++++.++..|+.+|..+..
T Consensus 18 ~~~~~~L~~~L~~~~~~vR~~A~~~L~~~~~-----------~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~------- 79 (211)
T 3ltm_A 18 PEKVEMYIKNLQDDSYYVRRAAAYALGKIGD-----------ERAVEPLIKALKDEDAWVRRAAADALGQIGD------- 79 (211)
T ss_dssp GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC-----------GGGHHHHHHHTTCSCHHHHHHHHHHHHHHCC-------
T ss_pred HhHHHHHHHHHcCCCHHHHHHHHHHHHHhCC-----------ccHHHHHHHHHcCCCHHHHHHHHHHHHhhCC-------
Confidence 4558999999999999999999999987653 3579999999999999999999999988752
Q ss_pred HHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCCC
Q 014196 151 IMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVLD 230 (429)
Q Consensus 151 ~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~ 230 (429)
.++++.|+.++.+.+..+|..++.+|..+. ..++++.|+++|.+++. .++..|+.+|.++..
T Consensus 80 ----~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~----------~~~~~~~L~~~l~d~~~-~vr~~a~~aL~~~~~--- 141 (211)
T 3ltm_A 80 ----ERAVEPLIKALKDEDGWVRQSAAVALGQIG----------DERAVEPLIKALKDEDW-FVRIAAAFALGEIGD--- 141 (211)
T ss_dssp ----GGGHHHHHHHTTCSSHHHHHHHHHHHHHHC----------CGGGHHHHHHHTTCSSH-HHHHHHHHHHHHHCC---
T ss_pred ----HHHHHHHHHHHcCCCHHHHHHHHHHHHHhC----------cHHHHHHHHHHHhCCCH-HHHHHHHHHHHHcCC---
Confidence 246677888899888999999999988875 23578999999988887 799999999998853
Q ss_pred ChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCChhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHHHh
Q 014196 231 NARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMILA 309 (429)
Q Consensus 231 n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~ 309 (429)
..+++.|+.++.+++ .++..++.+|..+.. ..+.+.|.+++. ++++.++..|..+|..+.
T Consensus 142 -------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~-----------~~~~~~L~~~l~-d~~~~vr~~A~~aL~~~~ 202 (211)
T 3ltm_A 142 -------ERAVEPLIKALKDEDGWVRQSAADALGEIGG-----------ERVRAAMEKLAE-TGTGFARKVAVNYLETHK 202 (211)
T ss_dssp -------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCS-----------HHHHHHHHHHHH-HCCHHHHHHHHHHHHC--
T ss_pred -------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc-----------hhHHHHHHHHHh-CCCHHHHHHHHHHHHhcC
Confidence 357899999998876 888899999988743 112347888887 788999999999999876
Q ss_pred hC
Q 014196 310 HQ 311 (429)
Q Consensus 310 ~~ 311 (429)
..
T Consensus 203 ~~ 204 (211)
T 3ltm_A 203 SF 204 (211)
T ss_dssp --
T ss_pred CC
Confidence 54
No 43
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=99.27 E-value=2.1e-10 Score=103.74 Aligned_cols=187 Identities=19% Similarity=0.166 Sum_probs=152.1
Q ss_pred cCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccc
Q 014196 113 LGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIP 192 (429)
Q Consensus 113 ~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~ 192 (429)
.+.++.|+.+|.++++.++..|+.+|..+.. .++++.|+.++.+.+...+..++.+|..+.
T Consensus 18 ~~~~~~L~~~L~~~~~~vR~~A~~~L~~~~~-----------~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~-------- 78 (211)
T 3ltm_A 18 PEKVEMYIKNLQDDSYYVRRAAAYALGKIGD-----------ERAVEPLIKALKDEDAWVRRAAADALGQIG-------- 78 (211)
T ss_dssp GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC-----------GGGHHHHHHHTTCSCHHHHHHHHHHHHHHC--------
T ss_pred HhHHHHHHHHHcCCCHHHHHHHHHHHHHhCC-----------ccHHHHHHHHHcCCCHHHHHHHHHHHHhhC--------
Confidence 5679999999999999999999999987643 356788889999888999999988888775
Q ss_pred cccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCCCChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCChhc
Q 014196 193 LSSSEILPFLVGILESGSSVETKELCIGALYNLSAVLDNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTSTG 271 (429)
Q Consensus 193 i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~e~ 271 (429)
..++++.|+++|.+.+. .++..|+.+|.++.. .++++.|+.+|.+++ .++..++.+|..+.. +
T Consensus 79 --~~~~~~~L~~~l~~~~~-~vr~~a~~aL~~~~~----------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~-~-- 142 (211)
T 3ltm_A 79 --DERAVEPLIKALKDEDG-WVRQSAAVALGQIGD----------ERAVEPLIKALKDEDWFVRIAAAFALGEIGD-E-- 142 (211)
T ss_dssp --CGGGHHHHHHHTTCSSH-HHHHHHHHHHHHHCC----------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC-G--
T ss_pred --CHHHHHHHHHHHcCCCH-HHHHHHHHHHHHhCc----------HHHHHHHHHHHhCCCHHHHHHHHHHHHHcCC-H--
Confidence 24578999999998887 799999999998753 357899999998876 888999999988743 1
Q ss_pred HHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHHHhhCCHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHH
Q 014196 272 KKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFK 351 (429)
Q Consensus 272 ~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~ 351 (429)
. ..+.|++++. +.++.++..|+.+|..+.. ..+++.|..++.++++.++..|.+.|..+.
T Consensus 143 -------~-~~~~L~~~l~-d~~~~vr~~a~~aL~~~~~-----------~~~~~~L~~~l~d~~~~vr~~A~~aL~~~~ 202 (211)
T 3ltm_A 143 -------R-AVEPLIKALK-DEDGWVRQSAADALGEIGG-----------ERVRAAMEKLAETGTGFARKVAVNYLETHK 202 (211)
T ss_dssp -------G-GHHHHHHHTT-CSSHHHHHHHHHHHHHHCS-----------HHHHHHHHHHHHHCCHHHHHHHHHHHHC--
T ss_pred -------H-HHHHHHHHHc-CCCHHHHHHHHHHHHHhCc-----------hhHHHHHHHHHhCCCHHHHHHHHHHHHhcC
Confidence 2 3358999997 7889999999999998742 235788999999999999999999999888
Q ss_pred hcc
Q 014196 352 DER 354 (429)
Q Consensus 352 ~~~ 354 (429)
...
T Consensus 203 ~~~ 205 (211)
T 3ltm_A 203 SFN 205 (211)
T ss_dssp ---
T ss_pred CCC
Confidence 643
No 44
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=99.26 E-value=3.1e-10 Score=101.78 Aligned_cols=185 Identities=17% Similarity=0.144 Sum_probs=152.2
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchH
Q 014196 70 DCVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNK 149 (429)
Q Consensus 70 ~~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk 149 (429)
.....+.+++.|.++++.++..|+..|..+.. .++++.|+.+|.++++.++..|+.+|..+..
T Consensus 12 ~~~~~~~~i~~L~~~~~~vr~~A~~~L~~~~~-----------~~~~~~L~~~l~~~~~~vr~~a~~~L~~~~~------ 74 (201)
T 3ltj_A 12 DPEKVEMYIKNLQDDSYYVRRAAAYALGKIGD-----------ERAVEPLIKALKDEDAWVRRAAADALGQIGD------ 74 (201)
T ss_dssp CHHHHHHHHHHTTCSCHHHHHHHHHHHHHHCC-----------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC------
T ss_pred CCcchHHHHHHhcCCCHHHHHHHHHHHHhcCC-----------hhHHHHHHHHHcCCCHHHHHHHHHHHHhhCC------
Confidence 46778999999999999999999999987653 2568999999999999999999999988742
Q ss_pred HHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCC
Q 014196 150 AIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVL 229 (429)
Q Consensus 150 ~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~ 229 (429)
.++++.|+.++.+.+..+|..++.+|..+. ...+++.|+.+|.+.+. .++..|+.+|.++..
T Consensus 75 -----~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~----------~~~~~~~L~~~l~d~~~-~vr~~a~~aL~~~~~-- 136 (201)
T 3ltj_A 75 -----ERAVEPLIKALKDEDGWVRQSAAVALGQIG----------DERAVEPLIKALKDEDW-FVRIAAAFALGEIGD-- 136 (201)
T ss_dssp -----GGGHHHHHHHTTCSSHHHHHHHHHHHHHHC----------CGGGHHHHHHHTTCSSH-HHHHHHHHHHHHHTC--
T ss_pred -----HHHHHHHHHHHcCCCHHHHHHHHHHHHHhC----------cHHHHHHHHHHHcCCCH-HHHHHHHHHHHHhCC--
Confidence 245777888898888999999999988875 23578999999988886 799999999998853
Q ss_pred CChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCChhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHHH
Q 014196 230 DNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMIL 308 (429)
Q Consensus 230 ~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L 308 (429)
.+.++.|+.++.+.+ .++..|+.+|..+.. + ...+.|.+++. +.++.++..|..+|..+
T Consensus 137 --------~~~~~~L~~~l~d~~~~vr~~A~~aL~~~~~-~----------~~~~~L~~~l~-d~~~~vr~~A~~aL~~l 196 (201)
T 3ltj_A 137 --------ERAVEPLIKALKDEDGWVRQSAADALGEIGG-E----------RVRAAMEKLAE-TGTGFARKVAVNYLETH 196 (201)
T ss_dssp --------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCS-H----------HHHHHHHHHHH-HCCHHHHHHHHHHHHHC
T ss_pred --------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc-h----------hHHHHHHHHHh-CCCHHHHHHHHHHHHHH
Confidence 468899999999876 788999999988732 1 12347888887 68899999999988775
Q ss_pred h
Q 014196 309 A 309 (429)
Q Consensus 309 ~ 309 (429)
-
T Consensus 197 ~ 197 (201)
T 3ltj_A 197 K 197 (201)
T ss_dssp C
T ss_pred H
Confidence 4
No 45
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=99.22 E-value=3.7e-10 Score=101.24 Aligned_cols=185 Identities=19% Similarity=0.174 Sum_probs=151.1
Q ss_pred cCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccc
Q 014196 113 LGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIP 192 (429)
Q Consensus 113 ~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~ 192 (429)
.+..+.++.+|.++|+.++..|+.+|..+.. .++++.|+.++.+.+...+..++.+|..+.
T Consensus 13 ~~~~~~~i~~L~~~~~~vr~~A~~~L~~~~~-----------~~~~~~L~~~l~~~~~~vr~~a~~~L~~~~-------- 73 (201)
T 3ltj_A 13 PEKVEMYIKNLQDDSYYVRRAAAYALGKIGD-----------ERAVEPLIKALKDEDAWVRRAAADALGQIG-------- 73 (201)
T ss_dssp HHHHHHHHHHTTCSCHHHHHHHHHHHHHHCC-----------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHC--------
T ss_pred CcchHHHHHHhcCCCHHHHHHHHHHHHhcCC-----------hhHHHHHHHHHcCCCHHHHHHHHHHHHhhC--------
Confidence 3567899999999999999999999987653 246778888898888889999888888764
Q ss_pred cccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCCCChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCChhc
Q 014196 193 LSSSEILPFLVGILESGSSVETKELCIGALYNLSAVLDNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTSTG 271 (429)
Q Consensus 193 i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~e~ 271 (429)
..++++.|+.+|.+.++ .++..|+.+|.++.. .++++.|+.+|.+++ .++..++.+|..+..
T Consensus 74 --~~~~~~~L~~~l~d~~~-~vr~~a~~aL~~~~~----------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~---- 136 (201)
T 3ltj_A 74 --DERAVEPLIKALKDEDG-WVRQSAAVALGQIGD----------ERAVEPLIKALKDEDWFVRIAAAFALGEIGD---- 136 (201)
T ss_dssp --CGGGHHHHHHHTTCSSH-HHHHHHHHHHHHHCC----------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHTC----
T ss_pred --CHHHHHHHHHHHcCCCH-HHHHHHHHHHHHhCc----------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCC----
Confidence 23578999999998887 799999999998753 357899999998876 788899999988743
Q ss_pred HHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHHHhhCCHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHH
Q 014196 272 KKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFK 351 (429)
Q Consensus 272 ~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~ 351 (429)
....+.|++++. +.++.++..|+.+|..+. ++ .+++.|..++.++++.++..|.+.|..+.
T Consensus 137 -------~~~~~~L~~~l~-d~~~~vr~~A~~aL~~~~--~~---------~~~~~L~~~l~d~~~~vr~~A~~aL~~l~ 197 (201)
T 3ltj_A 137 -------ERAVEPLIKALK-DEDGWVRQSAADALGEIG--GE---------RVRAAMEKLAETGTGFARKVAVNYLETHK 197 (201)
T ss_dssp -------GGGHHHHHHHTT-CSSHHHHHHHHHHHHHHC--SH---------HHHHHHHHHHHHCCHHHHHHHHHHHHHCC
T ss_pred -------HHHHHHHHHHHc-CCCHHHHHHHHHHHHHhC--ch---------hHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 123358999998 788899999999999873 22 26788899999999999999999988765
Q ss_pred h
Q 014196 352 D 352 (429)
Q Consensus 352 ~ 352 (429)
.
T Consensus 198 ~ 198 (201)
T 3ltj_A 198 S 198 (201)
T ss_dssp -
T ss_pred h
Confidence 3
No 46
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=99.18 E-value=3.7e-10 Score=123.38 Aligned_cols=310 Identities=12% Similarity=0.055 Sum_probs=211.0
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHH--HH--hcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCc
Q 014196 72 VLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKL--MA--ELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYT 147 (429)
Q Consensus 72 ~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~--i~--~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~ 147 (429)
..++.++..+.++++..+..|+..|..++++.+..-.. +. -.+.+|.|+.++.++++.+|..|+++|.++.....
T Consensus 128 ~ll~~L~~~l~~~~~~~r~~al~~L~~i~~~~~~~~~~~~~~~~~~~il~~l~~~l~~~~~~vR~~A~~aL~~~~~~~~- 206 (852)
T 4fdd_A 128 DLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRT- 206 (852)
T ss_dssp THHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHTTHHHHCSSSSCHHHHHHHHTTTTTCSSHHHHHHHHHHHHTTTTTTC-
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhHHHhchhhhcchHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhccc-
Confidence 45888999999989999999999999998755432111 00 13468889999999999999999999998876542
Q ss_pred hHHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCC--ccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHh
Q 014196 148 NKAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANT--HIPLSSSEILPFLVGILESGSSVETKELCIGALYNL 225 (429)
Q Consensus 148 nk~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~--~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nL 225 (429)
....-.-.+.++.+..++...+.++|..++.+|..++..... ...+ .+.++.+..++.+.+. .++..|+..+.++
T Consensus 207 ~~~~~~~~~~l~~l~~~~~d~~~~vr~~a~~~L~~l~~~~~~~~~~~l--~~l~~~l~~~~~~~~~-~vr~~a~e~l~~l 283 (852)
T 4fdd_A 207 QALMLHIDSFIENLFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHM--HNIVEYMLQRTQDQDE-NVALEACEFWLTL 283 (852)
T ss_dssp HHHHTSHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHCHHHHGGGH--HHHHHHHHHHHTCSSH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHH--HHHHHHHHHHccCCcH-HHHHHHHHHHHHH
Confidence 211111124677788888888889999999999998854311 1111 2467888888887765 7899999999999
Q ss_pred ccCCCChhHHH--hcCcHHHHHHhc-----------cC-----------Cc-chHHHHHHHHHHhhCChhcHHHHhcCCC
Q 014196 226 SAVLDNARPMV--SNGVVHTLLKLC-----------SM-----------KE-RLSEKSLATLGNLVVTSTGKKAMEDSPL 280 (429)
Q Consensus 226 s~~~~n~~~iv--~~G~v~~Lv~lL-----------~~-----------~~-~~~~~a~~~L~~La~~~e~~~~i~~~~~ 280 (429)
+.....+..+. -...+|.++..+ .| .+ .+++.+..+|..++.... ..+.. .
T Consensus 284 ~~~~~~~~~~~~~~~~l~p~ll~~l~~~e~d~~~~~~d~~ed~~~dd~~~~~~vr~~a~~~L~~la~~~~--~~~~~--~ 359 (852)
T 4fdd_A 284 AEQPICKDVLVRHLPKLIPVLVNGMKYSDIDIILLKGDVEGGSGGDDTISDWNLRKCSAAALDVLANVYR--DELLP--H 359 (852)
T ss_dssp TTSTTHHHHHTTTHHHHHHHHHHHTSCCHHHHHHHHC------------CCCCHHHHHHHHHHHHHHHHG--GGGHH--H
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHcCCcHhHHHHhcCCcccccccccccccchHHHHHHHHHHHHHHhcc--HHHHH--H
Confidence 87643222111 125677777777 23 11 357778888888876321 11222 2
Q ss_pred ChHHHHHhcccCCChhHHHHHHHHHHHHhhCCHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHhccccCCCC
Q 014196 281 VPESLIEILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKDERQAKMGP 360 (429)
Q Consensus 281 i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~~~~~~~~~ 360 (429)
+.+.+.+.+. +.+...++.|+.+|..++.+..+.... .-.+++|.|+.++.+.++.++..|+|.|..+.+.-.. ..
T Consensus 360 l~~~l~~~l~-~~~~~~R~aa~~alg~i~~~~~~~~~~-~l~~~l~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~--~~ 435 (852)
T 4fdd_A 360 ILPLLKELLF-HHEWVVKESGILVLGAIAEGCMQGMIP-YLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVS--QP 435 (852)
T ss_dssp HHHHHHHHHT-CSSHHHHHHHHHHHHHTTTTTHHHHGG-GHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTHHHHHH--SC
T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHhcchHHHHH-HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc--ch
Confidence 3346777777 678999999999999999876543222 2246789999999999999999999999988863210 01
Q ss_pred CCCCCcccc-----ccCCCCChhhhHHHHHHHHHHHHHH
Q 014196 361 HSGPQTRRV-----SIGSPVSPREAQEGKKMMKNLVQQS 394 (429)
Q Consensus 361 ~~~~~~~~~-----~~~~~~~~~~~~~~k~~l~~~~~~~ 394 (429)
+ .+....+ ....+.+.+.+..+-.++.++++.+
T Consensus 436 ~-~~~~~~ll~~L~~~L~d~~~~vr~~a~~aL~~l~~~~ 473 (852)
T 4fdd_A 436 P-DTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEA 473 (852)
T ss_dssp T-TTTHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHh
Confidence 1 1122221 1122346778888888998888765
No 47
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=99.17 E-value=8.8e-10 Score=104.07 Aligned_cols=201 Identities=11% Similarity=0.010 Sum_probs=150.4
Q ss_pred HHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCC
Q 014196 110 MAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANT 189 (429)
Q Consensus 110 i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~ 189 (429)
....+.++.|+..|.++++.++..|+++|.++.. .++++.|+.++.+.+...|..++.+|..+......
T Consensus 19 ~~~~~~i~~L~~~L~~~~~~vr~~A~~~L~~~~~-----------~~~~~~L~~~l~d~~~~vR~~A~~aL~~l~~~~~~ 87 (280)
T 1oyz_A 19 QCKKLNDDELFRLLDDHNSLKRISSARVLQLRGG-----------QDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKC 87 (280)
T ss_dssp HHHTSCHHHHHHHTTCSSHHHHHHHHHHHHHHCC-----------HHHHHHHHHHHTCSSHHHHHHHHHHHHHSCCCTTT
T ss_pred HHHHhhHHHHHHHHHcCCHHHHHHHHHHHHccCC-----------chHHHHHHHHHcCCCHHHHHHHHHHHHHhcccccc
Confidence 3446789999999999999999999999998861 23567788999988888999999998887632211
Q ss_pred ccccccCCcHHHHHH-hhhcCCcHHHHHHHHHHHHHhccCCCChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhC
Q 014196 190 HIPLSSSEILPFLVG-ILESGSSVETKELCIGALYNLSAVLDNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVV 267 (429)
Q Consensus 190 ~~~i~~~g~i~~Lv~-lL~~~~~~~~~~~A~~aL~nLs~~~~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~ 267 (429)
.. ..++.|.. ++.+.+. .++..++.+|.++...... ....+++.|+.++.+++ .++..++.+|.++..
T Consensus 88 ~~-----~l~~~L~~~~~~d~~~-~vr~~a~~aL~~l~~~~~~----~~~~~~~~L~~~l~d~~~~vR~~a~~aL~~~~~ 157 (280)
T 1oyz_A 88 ED-----NVFNILNNMALNDKSA-CVRATAIESTAQRCKKNPI----YSPKIVEQSQITAFDKSTNVRRATAFAISVIND 157 (280)
T ss_dssp HH-----HHHHHHHHHHHHCSCH-HHHHHHHHHHHHHHHHCGG----GHHHHHHHHHHHTTCSCHHHHHHHHHHHHTC--
T ss_pred ch-----HHHHHHHHHHhcCCCH-HHHHHHHHHHHHHhccCCc----ccHHHHHHHHHHhhCCCHHHHHHHHHHHHhcCC
Confidence 00 12333432 3345555 7999999999998743211 12356889999999876 788888888887643
Q ss_pred ChhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHHHhhCCHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHH
Q 014196 268 TSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLL 347 (429)
Q Consensus 268 ~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL 347 (429)
...++.|++++. +.++.++..|+.+|..+...++ .+++.|+.++.+.++.++..|++.|
T Consensus 158 -----------~~~~~~L~~~l~-d~~~~vr~~a~~aL~~~~~~~~---------~~~~~L~~~l~d~~~~vR~~A~~aL 216 (280)
T 1oyz_A 158 -----------KATIPLLINLLK-DPNGDVRNWAAFAININKYDNS---------DIRDCFVEMLQDKNEEVRIEAIIGL 216 (280)
T ss_dssp ------------CCHHHHHHHHT-CSSHHHHHHHHHHHHHHTCCCH---------HHHHHHHHHTTCSCHHHHHHHHHHH
T ss_pred -----------HHHHHHHHHHHc-CCCHHHHHHHHHHHHhhccCcH---------HHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 124458999998 7888999999999998854333 3578899999999999999999999
Q ss_pred HHHHh
Q 014196 348 QWFKD 352 (429)
Q Consensus 348 ~~l~~ 352 (429)
..+.+
T Consensus 217 ~~~~~ 221 (280)
T 1oyz_A 217 SYRKD 221 (280)
T ss_dssp HHTTC
T ss_pred HHhCC
Confidence 88874
No 48
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=99.01 E-value=3.3e-08 Score=103.65 Aligned_cols=265 Identities=11% Similarity=0.134 Sum_probs=159.5
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCch--
Q 014196 71 CVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTN-- 148 (429)
Q Consensus 71 ~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~n-- 148 (429)
...++.+.+.|.+.++.+|+.|+.++..+.+.+++ .+.+.|.++.|..+|.++|+.++..|+.+|..++.++.+.
T Consensus 120 ~~l~~~l~~~L~d~~~~VRk~A~~al~~i~~~~p~---~~~~~~~~~~l~~lL~d~d~~V~~~A~~aL~~i~~~~~~~~~ 196 (591)
T 2vgl_B 120 EYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQ---MVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNL 196 (591)
T ss_dssp HHHHHHHHHHSSCSCHHHHHHHHHHHHHHHHSSCC---CHHHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHTTSCCSCCS
T ss_pred HHHHHHHHHHcCCCChHHHHHHHHHHHHHHhhChh---hcccccHHHHHHHHhCCCChhHHHHHHHHHHHHHhhCCCccc
Confidence 34566788888888999999999999999987665 3334678999999999999999999999999998875321
Q ss_pred -------HHHHHh----------------------------cCccchhhhhccCCCHHHHHHHHHHHHHhhccC-CCccc
Q 014196 149 -------KAIMVE----------------------------AGILTKLPKNVDAVDESTRHEFGELLLSLSSLA-NTHIP 192 (429)
Q Consensus 149 -------k~~iv~----------------------------~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~-~~~~~ 192 (429)
-..++. ...++.+..++++.+..++.+|+.++..+...- .+...
T Consensus 197 ~~l~~~~~~~Ll~~l~~~~~~~q~~il~~l~~l~~~~~~~~~~~l~~l~~~l~~~~~~V~~ea~~~i~~l~~~~~~~~~~ 276 (591)
T 2vgl_B 197 LDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDY 276 (591)
T ss_dssp CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHTSCCCSHHHHHHHHHHHTTCSCSSTTHHHHHHHHHHHHSCCSCCBTTBS
T ss_pred hhccHHHHHHHHHcCCCCCchHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHhhccCCCHHH
Confidence 111111 134556666677777888888999998886321 11111
Q ss_pred cc--cCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccC-CCChhHH-------------------------Hhc----Cc
Q 014196 193 LS--SSEILPFLVGILESGSSVETKELCIGALYNLSAV-LDNARPM-------------------------VSN----GV 240 (429)
Q Consensus 193 i~--~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~-~~n~~~i-------------------------v~~----G~ 240 (429)
+. ...+.++|+.++. +++ .++..|+.+|..+... ++-.... +.. .+
T Consensus 277 ~~~~~~~~~~~L~~L~~-~d~-~vr~~aL~~l~~i~~~~p~~~~~~~~~~~~~~~d~~~Ir~~al~~L~~l~~~~nv~~i 354 (591)
T 2vgl_B 277 YNMLLKKLAPPLVTLLS-GEP-EVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQV 354 (591)
T ss_dssp HHHHHHHTHHHHHHHTT-SCH-HHHHHHHHHHHHHHHHCCSTTTTCTTTTSCCTTSCHHHHHHHHHHHHHTCCSSTHHHH
T ss_pred HHHHHHHHHHHHHHHhc-CCc-cHHHHHHHHHHHHHHhChHHHHHHHHhheeccCChHHHHHHHHHHHHHHCChhhHHHH
Confidence 11 1245677777664 454 6888888888888753 2211100 001 12
Q ss_pred HHHHHHhccCCc-chHHHHHHHHHHhhC-ChhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHHHhhCCHHHHHH
Q 014196 241 VHTLLKLCSMKE-RLSEKSLATLGNLVV-TSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMILAHQSSEQRDK 318 (429)
Q Consensus 241 v~~Lv~lL~~~~-~~~~~a~~~L~~La~-~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~~~~~~~~~ 318 (429)
++.|..++.+.+ +++..++..+..++. .+..... +++.|++++. .........++.++..+....++.
T Consensus 355 v~~L~~~l~~~d~~~r~~~v~aI~~la~~~~~~~~~------~v~~Ll~ll~-~~~~~v~~e~i~~l~~ii~~~p~~--- 424 (591)
T 2vgl_B 355 LAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER------CVSTLLDLIQ-TKVNYVVQEAIVVIRDIFRKYPNK--- 424 (591)
T ss_dssp HHHHHHHTTSSCHHHHHHHHHHHHHHHTTCHHHHHH------HHHHHHHHHH-TCCHHHHHHHHHHHHHHHHHSCSS---
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHhChhHHHH------HHHHHHHHHc-ccchHHHHHHHHHHHHHHHHCcch---
Confidence 223333333333 455555555555554 2211111 1235555555 334444444444444444322211
Q ss_pred HHhCCchHHHHHHhhc-CCHHHHHHHHHHHHHHHh
Q 014196 319 MAKSGIVHVSLQLALL-GSPLAQRRASKLLQWFKD 352 (429)
Q Consensus 319 i~~~G~v~~L~~ll~~-~~~~~k~~A~~lL~~l~~ 352 (429)
...+++.|++.+.. ..+.++..+.|+|+.+++
T Consensus 425 --~~~~v~~L~~~l~~~~~~~~~~~~~wilGey~~ 457 (591)
T 2vgl_B 425 --YESIIATLCENLDSLDEPDARAAMIWIVGEYAE 457 (591)
T ss_dssp --CCTTHHHHHHTTTTCCSHHHHHHHHHHHHTTCT
T ss_pred --HHHHHHHHHHHHHhccCHHHHHHHHHHHHcccc
Confidence 24567777777764 467777778887776654
No 49
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=99.01 E-value=1.1e-09 Score=116.99 Aligned_cols=194 Identities=20% Similarity=0.183 Sum_probs=145.6
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHH-HhhcCCCHHHHHHHHHHHHHhccCCC-chH
Q 014196 72 VLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLV-SMVSTEVIGRRRAAIKALIQLANGTY-TNK 149 (429)
Q Consensus 72 ~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv-~lL~s~~~~~~~~A~~aL~nLa~~~~-~nk 149 (429)
..+..+++.|+++++..|..|+.+|.+++. ++.+|+.+...|+|.+++ .+|.+++.+++++|+++|.||+.+.. +..
T Consensus 34 ~~i~Pll~~L~S~~~~~r~~A~~al~~l~~-~~~~~~l~~~~~~v~~ll~~lL~D~~~~Vr~~A~gaLrnL~~~~g~d~~ 112 (684)
T 4gmo_A 34 DKILPVLKDLKSPDAKSRTTAAGAIANIVQ-DAKCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVLAQEEEADFC 112 (684)
T ss_dssp HTTHHHHHHHSSSCCSHHHHHHHHHHHHTT-SHHHHHHHHHTTHHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHSCHHHH
T ss_pred hhHHHHHHHcCCCCHHHHHHHHHHHHHHHc-CcHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhcCchHH
Confidence 356788999999999999999999999996 788999999999998765 57888999999999999999997742 357
Q ss_pred HHHHhcCccchhhhhccCCC--------------H-------HHHHHHHHHHHHhhccC-CCccccccCCcHHHHHHhhh
Q 014196 150 AIMVEAGILTKLPKNVDAVD--------------E-------STRHEFGELLLSLSSLA-NTHIPLSSSEILPFLVGILE 207 (429)
Q Consensus 150 ~~iv~~G~i~~Lv~lL~~~~--------------~-------~~~~~aa~~L~~Ls~~~-~~~~~i~~~g~i~~Lv~lL~ 207 (429)
..+++.|++++|..+++... . +..+++..+|++|+... +....+...+.++.|+..|.
T Consensus 113 ~~l~~~~il~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lL~~L~e~s~~~~~~v~~~~~l~~l~~~L~ 192 (684)
T 4gmo_A 113 VHLYRLDVLTAIEHAAKAVLETLTTSEPPFSKLLKAQQRLVWDITGSLLVLIGLLALARDEIHEAVATKQTILRLLFRLI 192 (684)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHCBTTBGGGSCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHcChHHHHHHHHHhhHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhcccHHHHHHHHH
Confidence 78899999999998875311 1 12234567888988654 33345667899999999986
Q ss_pred cC--CcHHHHHHHHHHHHHhccCCCCh-hHHHhcCcHH---HHHHhccCCcchHHHHHHHHHHhh
Q 014196 208 SG--SSVETKELCIGALYNLSAVLDNA-RPMVSNGVVH---TLLKLCSMKERLSEKSLATLGNLV 266 (429)
Q Consensus 208 ~~--~~~~~~~~A~~aL~nLs~~~~n~-~~iv~~G~v~---~Lv~lL~~~~~~~~~a~~~L~~La 266 (429)
+. .+.+++..|+.+|++|+...... ..+.+.|... .++.+..+.+..+..++++|.|+.
T Consensus 193 ~~~~~~~~v~~~a~~~L~~ls~dn~~~~~~i~~~~~~~~~~~ll~~~~~~~~~~~la~giL~Ni~ 257 (684)
T 4gmo_A 193 SADIAPQDIYEEAISCLTTLSEDNLKVGQAITDDQETHVYDVLLKLATGTDPRAVMACGVLHNVF 257 (684)
T ss_dssp HHCCSCHHHHHHHHHHHHHHHTTCHHHHHHHHTCCSSCHHHHHHHHHHSSCTTHHHHHHHHHHHH
T ss_pred hcCCCcHHHHHHHHHHHHHHhccCHHHHHHHHhcchHHHHHHHHHHhcCCcHHHHHHHHHHHhHh
Confidence 53 23468889999999999865443 5566655433 333333343466677888888874
No 50
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=98.98 E-value=8.8e-10 Score=120.44 Aligned_cols=270 Identities=17% Similarity=0.185 Sum_probs=184.3
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHh--cCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCch-
Q 014196 72 VLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAE--LGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTN- 148 (429)
Q Consensus 72 ~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~--~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~n- 148 (429)
..++.+++.+.+.++.+|..|+..|..+....+. .+.. .+.++.|+.++.+++++++..|+++|.+++......
T Consensus 174 ~il~~l~~~l~~~~~~vR~~A~~aL~~~~~~~~~---~~~~~~~~~l~~l~~~~~d~~~~vr~~a~~~L~~l~~~~~~~~ 250 (852)
T 4fdd_A 174 IMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQ---ALMLHIDSFIENLFALAGDEEPEVRKNVCRALVMLLEVRMDRL 250 (852)
T ss_dssp HHHHHHTTTTTCSSHHHHHHHHHHHHTTTTTTCH---HHHTSHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcccH---HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhCHHHH
Confidence 3566677777778899999999999887754432 1211 256888999999999999999999999998764211
Q ss_pred HHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccccc--cCCcHHHHHHhhh----------cC-------
Q 014196 149 KAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPLS--SSEILPFLVGILE----------SG------- 209 (429)
Q Consensus 149 k~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~--~~g~i~~Lv~lL~----------~~------- 209 (429)
+..+ .+.++.+..++.+.+.+++..|+..+..++.....+..+. -...+|.|+..+. .+
T Consensus 251 ~~~l--~~l~~~l~~~~~~~~~~vr~~a~e~l~~l~~~~~~~~~~~~~~~~l~p~ll~~l~~~e~d~~~~~~d~~ed~~~ 328 (852)
T 4fdd_A 251 LPHM--HNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGMKYSDIDIILLKGDVEGGSGG 328 (852)
T ss_dssp GGGH--HHHHHHHHHHHTCSSHHHHHHHHHHHHHHTTSTTHHHHHTTTHHHHHHHHHHHTSCCHHHHHHHHC--------
T ss_pred HHHH--HHHHHHHHHHccCCcHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHcCCcHhHHHHhcCCccccccc
Confidence 1111 2467777888888888889999888888885432222111 1245677776662 11
Q ss_pred ----CcHHHHHHHHHHHHHhccCCCChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCChhcH-HHHhcCCCChH
Q 014196 210 ----SSVETKELCIGALYNLSAVLDNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTSTGK-KAMEDSPLVPE 283 (429)
Q Consensus 210 ----~~~~~~~~A~~aL~nLs~~~~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~e~~-~~i~~~~~i~~ 283 (429)
....++..|..+|..|+..... .++ ..++|.+..++.+.+ .+++.|+.+|.+++...... .... ..+.+
T Consensus 329 dd~~~~~~vr~~a~~~L~~la~~~~~--~~~-~~l~~~l~~~l~~~~~~~R~aa~~alg~i~~~~~~~~~~~l--~~~l~ 403 (852)
T 4fdd_A 329 DDTISDWNLRKCSAAALDVLANVYRD--ELL-PHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYL--PELIP 403 (852)
T ss_dssp ----CCCCHHHHHHHHHHHHHHHHGG--GGH-HHHHHHHHHHHTCSSHHHHHHHHHHHHHTTTTTHHHHGGGH--HHHHH
T ss_pred ccccccchHHHHHHHHHHHHHHhccH--HHH-HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcchHHHHHHH--HHHHH
Confidence 1113577888899888864321 222 246777777787766 88999999999998753211 1111 23445
Q ss_pred HHHHhcccCCChhHHHHHHHHHHHHhhCCHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHh
Q 014196 284 SLIEILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKD 352 (429)
Q Consensus 284 ~Lv~~L~~~~s~~~~e~A~~~L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~ 352 (429)
.|+..+. +.++.++..|+.+|..++...........-.++++.|+..+.+.++.++..|++.|..+.+
T Consensus 404 ~l~~~l~-d~~~~Vr~~a~~~l~~l~~~~~~~~~~~~~~~ll~~L~~~L~d~~~~vr~~a~~aL~~l~~ 471 (852)
T 4fdd_A 404 HLIQCLS-DKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEE 471 (852)
T ss_dssp HHHHHTT-CSSHHHHHHHHHHHHHTHHHHHHSCTTTTHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHcC-CCCHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 8888888 7899999999999999886321110011112578889998888899999999999888875
No 51
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=98.97 E-value=7.3e-09 Score=104.04 Aligned_cols=273 Identities=12% Similarity=0.035 Sum_probs=183.4
Q ss_pred HHHHHHHHHhcCC--CHHHHHHHHHHHHHHhhhc-hHHHHHHHhcCcHHHHHHhhcCC--CHHHHHHHHHHHHHhccCCC
Q 014196 72 VLLQKSVKRLHFG--SWEEKEMAAKEIEKLAKED-VKIKKLMAELGVIQMLVSMVSTE--VIGRRRAAIKALIQLANGTY 146 (429)
Q Consensus 72 ~~l~~lv~~L~~~--~~~~~~~Aa~~L~~La~~~-~~~r~~i~~~G~i~~Lv~lL~s~--~~~~~~~A~~aL~nLa~~~~ 146 (429)
..++.++..+.++ ++..+..|+..|..++++. ++.-.... ..+++.++.+|.++ ++.++..|+.++.++...-+
T Consensus 128 ~ll~~L~~~l~~~~~~~~~r~~al~~l~~l~~~~~~~~~~~~~-~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~ 206 (462)
T 1ibr_B 128 ELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKS-NEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTK 206 (462)
T ss_dssp THHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCGGGTGGGH-HHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTH
T ss_pred HHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHhCCchhhHhHH-HHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4688899999888 8899999999999998753 21100011 23678889999887 79999999999998754321
Q ss_pred chH-HHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCC--ccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHH
Q 014196 147 TNK-AIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANT--HIPLSSSEILPFLVGILESGSSVETKELCIGALY 223 (429)
Q Consensus 147 ~nk-~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~--~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~ 223 (429)
.+- ......-.++.+...+...+.+.+..++.+|..+...... ...+ ..+.++.++..+.+.+. .++..|+..+.
T Consensus 207 ~~~~~~~~~~~l~~~l~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~-~v~~~a~~~l~ 284 (462)
T 1ibr_B 207 ANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYM-GPALFAITIEAMKSDID-EVALQGIEFWS 284 (462)
T ss_dssp HHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCGGGCTTTT-TTTHHHHHHHHHHCSSH-HHHHHHHHHHH
T ss_pred HhhhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCch-HHHHHHHHHHH
Confidence 110 0111111345556666777788888888888888754321 1111 11678888888877665 78899999988
Q ss_pred HhccCC------------------CChhHHHh---cCcHHHHHHhccCC-------c-chHHHHHHHHHHhhCChhcHHH
Q 014196 224 NLSAVL------------------DNARPMVS---NGVVHTLLKLCSMK-------E-RLSEKSLATLGNLVVTSTGKKA 274 (429)
Q Consensus 224 nLs~~~------------------~n~~~iv~---~G~v~~Lv~lL~~~-------~-~~~~~a~~~L~~La~~~e~~~~ 274 (429)
+++... .....+++ ...+|.++..|.+. + .++..|..+|..++..-. . .
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~l~~~l~~~d~d~~~~~~~~r~~a~~~L~~l~~~~~-~-~ 362 (462)
T 1ibr_B 285 NVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCE-D-D 362 (462)
T ss_dssp HHHHHHHHHHHHHCCTTCSSSCSSCCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCSHHHHHHHHHHHHHHHTT-T-T
T ss_pred HHHHHHHHHHHhcccccccCCCccchhHHHHHHHhhhccHHHHHHHHhcccccccccchHHHHHHHHHHHHHHhcc-H-H
Confidence 887542 01111222 34677777777531 2 577788888888876321 1 2
Q ss_pred HhcCCCChHHHHHhcccCCChhHHHHHHHHHHHHhhCCH-HHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHhc
Q 014196 275 MEDSPLVPESLIEILTWEEKPKCQELSAYILMILAHQSS-EQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKDE 353 (429)
Q Consensus 275 i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~~~~-~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~~ 353 (429)
+.. .+.+.+.+.+. +.+...++.|+.+|..++.+.. +.....+ ..++|.|+.++.+..+.+|..|+|.|..+.+.
T Consensus 363 ~~~--~~~~~l~~~l~-~~~~~~r~aal~~l~~l~~~~~~~~~~~~l-~~~~~~l~~~l~d~~~~Vr~~a~~~l~~~~~~ 438 (462)
T 1ibr_B 363 IVP--HVLPFIKEHIK-NPDWRYRDAAVMAFGCILEGPEPSQLKPLV-IQAMPTLIELMKDPSVVVRDTAAWTVGRICEL 438 (462)
T ss_dssp HHH--HHHHHHHHHTT-CSSHHHHHHHHHHHHHTSSSSCTTTTCTTT-TTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHH
T ss_pred HHH--HHHHHHHHHhc-CCChHHHHHHHHHHHHHhcCCcHHHHHHHH-HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHh
Confidence 221 23346777777 6788999999999999987432 2111111 56899999999999999999999999988864
No 52
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=98.95 E-value=1.3e-09 Score=116.33 Aligned_cols=193 Identities=11% Similarity=0.070 Sum_probs=146.6
Q ss_pred cHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHHHHhcCccchh-hhhccCCCHHHHHHHHHHHHHhhccC--CCcc
Q 014196 115 VIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKL-PKNVDAVDESTRHEFGELLLSLSSLA--NTHI 191 (429)
Q Consensus 115 ~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~iv~~G~i~~L-v~lL~~~~~~~~~~aa~~L~~Ls~~~--~~~~ 191 (429)
.|.|++..|+++|+..|..|+++|.||+.+. .++..+...|+|.++ ..+|...+.+++.+|+++|.||+... +.+.
T Consensus 35 ~i~Pll~~L~S~~~~~r~~A~~al~~l~~~~-~~~~l~~~~~~v~~ll~~lL~D~~~~Vr~~A~gaLrnL~~~~g~d~~~ 113 (684)
T 4gmo_A 35 KILPVLKDLKSPDAKSRTTAAGAIANIVQDA-KCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVLAQEEEADFCV 113 (684)
T ss_dssp TTHHHHHHHSSSCCSHHHHHHHHHHHHTTSH-HHHHHHHHTTHHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred hHHHHHHHcCCCCHHHHHHHHHHHHHHHcCc-HHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhcCchHHH
Confidence 4667889999999999999999999999865 688888899988775 55788888999999999999999764 4455
Q ss_pred ccccCCcHHHHHHhhhcCCc--------------------HHHHHHHHHHHHHhccCCC-ChhHHHhcCcHHHHHHhccC
Q 014196 192 PLSSSEILPFLVGILESGSS--------------------VETKELCIGALYNLSAVLD-NARPMVSNGVVHTLLKLCSM 250 (429)
Q Consensus 192 ~i~~~g~i~~Lv~lL~~~~~--------------------~~~~~~A~~aL~nLs~~~~-n~~~iv~~G~v~~Lv~lL~~ 250 (429)
.+...|++++|..+++.... .....+++.+|++||.... ....+...|+++.|+.+|.+
T Consensus 114 ~l~~~~il~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lL~~L~e~s~~~~~~v~~~~~l~~l~~~L~~ 193 (684)
T 4gmo_A 114 HLYRLDVLTAIEHAAKAVLETLTTSEPPFSKLLKAQQRLVWDITGSLLVLIGLLALARDEIHEAVATKQTILRLLFRLIS 193 (684)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHCBTTBGGGSCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHcChHHHHHHHHHhhHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhcccHHHHHHHHHh
Confidence 67789999999999864110 1233467889999997554 44678889999999998853
Q ss_pred C---c-chHHHHHHHHHHhhC-ChhcHHHHhcCCCChHHHHHhccc-CCChhHHHHHHHHHHHHh
Q 014196 251 K---E-RLSEKSLATLGNLVV-TSTGKKAMEDSPLVPESLIEILTW-EEKPKCQELSAYILMILA 309 (429)
Q Consensus 251 ~---~-~~~~~a~~~L~~La~-~~e~~~~i~~~~~i~~~Lv~~L~~-~~s~~~~e~A~~~L~~L~ 309 (429)
. . +++..++.+|+.++. +++..+.+.+.+... .+.-++.. ..+...+..++++|+++.
T Consensus 194 ~~~~~~~v~~~a~~~L~~ls~dn~~~~~~i~~~~~~~-~~~~ll~~~~~~~~~~~la~giL~Ni~ 257 (684)
T 4gmo_A 194 ADIAPQDIYEEAISCLTTLSEDNLKVGQAITDDQETH-VYDVLLKLATGTDPRAVMACGVLHNVF 257 (684)
T ss_dssp HCCSCHHHHHHHHHHHHHHHTTCHHHHHHHHTCCSSC-HHHHHHHHHHSSCTTHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHHHHHhccCHHHHHHHHhcchHH-HHHHHHHHhcCCcHHHHHHHHHHHhHh
Confidence 2 2 788999999999998 577778888866542 22222210 234445677889999875
No 53
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=98.89 E-value=1.2e-07 Score=99.38 Aligned_cols=255 Identities=13% Similarity=0.091 Sum_probs=181.8
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHHHH
Q 014196 74 LQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMV 153 (429)
Q Consensus 74 l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~iv 153 (429)
.+.+++.+++.+...|+-+...+..+++.+++.. .-++..|..-|.++|+.++..|+.+|.++... +....+
T Consensus 51 ~~~vi~l~~s~~~~~Krl~yl~l~~~~~~~~e~~-----~l~~n~l~kdL~~~n~~ir~~AL~~L~~i~~~--~~~~~l- 122 (591)
T 2vgl_B 51 FPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMA-----IMAVNSFVKDCEDPNPLIRALAVRTMGCIRVD--KITEYL- 122 (591)
T ss_dssp HHHHHHTTSSSCHHHHHHHHHHHHHHHHHSHHHH-----HTTHHHHGGGSSSSSHHHHHHHHHHHHTCCSG--GGHHHH-
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHcccCchHH-----HHHHHHHHHHcCCCCHHHHHHHHHHHHcCChH--HHHHHH-
Confidence 6678888888899999989889999887665542 22467888899999999999999999998632 233333
Q ss_pred hcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCCCCh-
Q 014196 154 EAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVLDNA- 232 (429)
Q Consensus 154 ~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~n~- 232 (429)
++.+..++.+.++.+|..|+.++..+.... ...+.+.+.++.|.++|.+.++ .++..|+.+|..++......
T Consensus 123 ----~~~l~~~L~d~~~~VRk~A~~al~~i~~~~--p~~~~~~~~~~~l~~lL~d~d~-~V~~~A~~aL~~i~~~~~~~~ 195 (591)
T 2vgl_B 123 ----CEPLRKCLKDEDPYVRKTAAVCVAKLHDIN--AQMVEDQGFLDSLRDLIADSNP-MVVANAVAALSEISESHPNSN 195 (591)
T ss_dssp ----HHHHHHHSSCSCHHHHHHHHHHHHHHHHSS--CCCHHHHHHHHHHHHTTSCSCH-HHHHHHHHHHHHHTTSCCSCC
T ss_pred ----HHHHHHHcCCCChHHHHHHHHHHHHHHhhC--hhhcccccHHHHHHHHhCCCCh-hHHHHHHHHHHHHHhhCCCcc
Confidence 456788898888999999999999998633 2223345788999999988776 79999999999999765422
Q ss_pred hHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCC-hhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHHHhh
Q 014196 233 RPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVT-STGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMILAH 310 (429)
Q Consensus 233 ~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~-~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~ 310 (429)
......+.++.|+..+.+.+ -.+...+.+|..++.. ++.... +.+.+...+. +.++.++..|+.++..+..
T Consensus 196 ~~~l~~~~~~~Ll~~l~~~~~~~q~~il~~l~~l~~~~~~~~~~------~l~~l~~~l~-~~~~~V~~ea~~~i~~l~~ 268 (591)
T 2vgl_B 196 LLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQS------ICERVTPRLS-HANSAVVLSAVKVLMKFLE 268 (591)
T ss_dssp SCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHTSCCCSHHHHHH------HHHHHTTCSC-SSTTHHHHHHHHHHHHSCC
T ss_pred chhccHHHHHHHHHcCCCCCchHHHHHHHHHHHhCCCChHHHHH------HHHHHHHHHc-CCChHHHHHHHHHHHHHhh
Confidence 11122355777888777664 4555666677666542 222222 2336777777 7888899999999998864
Q ss_pred ---CCHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHh
Q 014196 311 ---QSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKD 352 (429)
Q Consensus 311 ---~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~ 352 (429)
.+++..+.+. ..+.+.|+.++. +++.+|..|...|..+..
T Consensus 269 ~~~~~~~~~~~~~-~~~~~~L~~L~~-~d~~vr~~aL~~l~~i~~ 311 (591)
T 2vgl_B 269 LLPKDSDYYNMLL-KKLAPPLVTLLS-GEPEVQYVALRNINLIVQ 311 (591)
T ss_dssp SCCBTTBSHHHHH-HHTHHHHHHHTT-SCHHHHHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHH-HHHHHHHHHHhc-CCccHHHHHHHHHHHHHH
Confidence 2333333333 245688887764 788899999887776664
No 54
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=98.89 E-value=2.9e-08 Score=102.89 Aligned_cols=264 Identities=13% Similarity=0.085 Sum_probs=182.1
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHH
Q 014196 72 VLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAI 151 (429)
Q Consensus 72 ~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~ 151 (429)
..++.+...+..+++.++..|+..|..++..-+.. ......+|.|..++.+++..++..|+.+|..++.... . .
T Consensus 164 ~l~~~l~~l~~d~~~~VR~~a~~~l~~l~~~~~~~---~~~~~l~~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~-~-~- 237 (588)
T 1b3u_A 164 ELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELD---NVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLP-Q-E- 237 (588)
T ss_dssp HHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTSCHH---HHHHTHHHHHHHHHTCSCHHHHTTHHHHHHHHHHHSC-H-H-
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhcHH---hHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCC-H-H-
Confidence 34555566667778999999999999988654321 2234678899999999999999999999999886542 1 1
Q ss_pred HHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCCCC
Q 014196 152 MVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVLDN 231 (429)
Q Consensus 152 iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~n 231 (429)
......+|.+..+++..+..+|..++.+|..++..... .......+|.+.+++.+.+. .++..|+.+|..++..-..
T Consensus 238 ~~~~~~~~~l~~~~~d~~~~vR~~a~~~l~~l~~~~~~--~~~~~~l~~~l~~~l~d~~~-~vr~~a~~~l~~~~~~~~~ 314 (588)
T 1b3u_A 238 DLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGP--EITKTDLVPAFQNLMKDCEA-EVRAAASHKVKEFCENLSA 314 (588)
T ss_dssp HHHHHTHHHHHHHHTCSSHHHHHHHHHTHHHHHHHHCH--HHHHHTHHHHHHHHHTCSSH-HHHHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHhCc--ccchhHHHHHHHHHhCCCcH-HHHHHHHHHHHHHHHHhCh
Confidence 12234677777888877788899999888888743211 11123568999999988776 7999999999998864322
Q ss_pred h--hHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCChhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHHH
Q 014196 232 A--RPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMIL 308 (429)
Q Consensus 232 ~--~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L 308 (429)
. ....-...+|.+..++.|++ .++..++.+|..++..-. ..... ..+.+.+..++. +.++.++..++.+|..+
T Consensus 315 ~~~~~~~~~~l~p~l~~~l~d~~~~vR~~a~~~l~~l~~~~~-~~~~~--~~l~p~l~~~l~-d~~~~Vr~~a~~~l~~l 390 (588)
T 1b3u_A 315 DCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILG-KDNTI--EHLLPLFLAQLK-DECPEVRLNIISNLDCV 390 (588)
T ss_dssp TTHHHHHHHTHHHHHHHHHTCSCHHHHHHHHTTGGGGHHHHC-HHHHH--HHTHHHHHHHHT-CSCHHHHHHHHTTCHHH
T ss_pred hhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhh-HhHHH--HHHHHHHHHHhC-CCchHHHHHHHHHHHHH
Confidence 1 11233467888888888876 788888888887765211 11111 124457888887 67788898888888877
Q ss_pred hhC-CHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHh
Q 014196 309 AHQ-SSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKD 352 (429)
Q Consensus 309 ~~~-~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~ 352 (429)
+.. ..+. ....++|.|..++.+.+.+++..+...|..+.+
T Consensus 391 ~~~~~~~~----~~~~~lp~l~~~~~d~~~~vr~~~~~~l~~l~~ 431 (588)
T 1b3u_A 391 NEVIGIRQ----LSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAG 431 (588)
T ss_dssp HHHSCHHH----HHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHH
T ss_pred HHhcCHHH----HHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHH
Confidence 752 2211 112456777777777777777777777766654
No 55
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=98.88 E-value=2.8e-08 Score=102.99 Aligned_cols=301 Identities=10% Similarity=0.055 Sum_probs=197.1
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHhhhch-HHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHH
Q 014196 73 LLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDV-KIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAI 151 (429)
Q Consensus 73 ~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~-~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~ 151 (429)
.++.++..+..++++++..|+..|..++..-+ ..+....-...+|.+..++.+.++.++..++++|..++..-. ...
T Consensus 282 l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~l~d~~~~vR~~a~~~l~~l~~~~~--~~~ 359 (588)
T 1b3u_A 282 LVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILG--KDN 359 (588)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHTSCTTTHHHHHHHTHHHHHHHHHTCSCHHHHHHHHTTGGGGHHHHC--HHH
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhChhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhh--HhH
Confidence 35666667777777788888887777765332 111112224567888999999999999999999999875421 111
Q ss_pred HHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCCCC
Q 014196 152 MVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVLDN 231 (429)
Q Consensus 152 iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~n 231 (429)
.....+|.+..+++..+.++|..++.+|..+...-... ......+|.|..++.+.+. .++..++.+|..++..-..
T Consensus 360 -~~~~l~p~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~--~~~~~~lp~l~~~~~d~~~-~vr~~~~~~l~~l~~~~~~ 435 (588)
T 1b3u_A 360 -TIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR--QLSQSLLPAIVELAEDAKW-RVRLAIIEYMPLLAGQLGV 435 (588)
T ss_dssp -HHHHTHHHHHHHHTCSCHHHHHHHHTTCHHHHHHSCHH--HHHHHHHHHHHHHHTCSSH-HHHHHHHHHHHHHHHHHCG
T ss_pred -HHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhcCHH--HHHHHHHHHHHHHhcCCCc-hHHHHHHHHHHHHHHHcCH
Confidence 22346777888888877888888887777666332110 0123468888888877765 7899999999988752111
Q ss_pred hhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCChhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHHHhh
Q 014196 232 ARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMILAH 310 (429)
Q Consensus 232 ~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~ 310 (429)
.......+|.++.+|.|.+ .+++.|+.+|..++..-... .+. ..+.+.|++++. +.+...+..++.++..++.
T Consensus 436 --~~~~~~l~~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~-~~~--~~llp~l~~~~~-~~~~~~R~~a~~~l~~l~~ 509 (588)
T 1b3u_A 436 --EFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKE-WAH--ATIIPKVLAMSG-DPNYLHRMTTLFCINVLSE 509 (588)
T ss_dssp --GGCCHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHCHH-HHH--HHTHHHHHHTTT-CSCHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhCch-hHH--HHHHHHHHHHhh-CCCHHHHHHHHHHHHHHHH
Confidence 1122346788899998876 78899999999887632111 111 234457888776 6788899999999998875
Q ss_pred CCHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHhcc-ccCCCCCCCCCccccccCCCCChhhhHHHHHHHHH
Q 014196 311 QSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKDER-QAKMGPHSGPQTRRVSIGSPVSPREAQEGKKMMKN 389 (429)
Q Consensus 311 ~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ 389 (429)
.- ........++|.|+.++.+..+.+|..+.+.|..+...- ..-..+...|.+. ....+.+.+.+..+..|++.
T Consensus 510 ~~---~~~~~~~~~~~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~~~~~~~~p~l~--~l~~d~d~~vr~~a~~al~~ 584 (588)
T 1b3u_A 510 VC---GQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILE--KLTQDQDVDVKYFAQEALTV 584 (588)
T ss_dssp HH---HHHHHHHHTHHHHHHGGGCSCHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHH--HHTTCSSHHHHHHHHHHHHH
T ss_pred hc---CHHHHHHHHHHHHHhhCCCCCchHHHHHHHHHHHHHHHhchhhhHHHHHHHHH--HHcCCCchhHHHHHHHHHHH
Confidence 31 111233457899999999889999999999998887521 1000000001111 12233366777777777765
Q ss_pred H
Q 014196 390 L 390 (429)
Q Consensus 390 ~ 390 (429)
+
T Consensus 585 l 585 (588)
T 1b3u_A 585 L 585 (588)
T ss_dssp T
T ss_pred h
Confidence 4
No 56
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=98.62 E-value=2.6e-06 Score=89.67 Aligned_cols=276 Identities=12% Similarity=0.058 Sum_probs=174.2
Q ss_pred ccchhhHHHHHHHHHhhcccccCCCCCCCChhhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHH
Q 014196 38 EKSRTLKNINCQEEKQVIIEEKNHEQSDIEEDDCVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQ 117 (429)
Q Consensus 38 ~PN~~Lr~lI~~W~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~ 117 (429)
.+|+.+|++..-...... +.. .+...-.+..+.+.|.++|+..+..|+..|..+.. ++. . ...++
T Consensus 81 s~~~~~Krl~Yl~~~~~~------~~~--~e~~~l~in~l~kDL~~~n~~vr~lAL~~L~~i~~--~~~----~-~~l~~ 145 (618)
T 1w63_A 81 SQKFTDKRIGYLGAMLLL------DER--QDVHLLMTNCIKNDLNHSTQFVQGLALCTLGCMGS--SEM----C-RDLAG 145 (618)
T ss_dssp SSSHHHHHHHHHHHHHHC------CCC--HHHHHHHHHHHHHHHSCSSSHHHHHHHHHHHHHCC--HHH----H-HHHHH
T ss_pred CCchHHHHHHHHHHHHHh------CCC--cHHHHHHHHHHHHhcCCCCHhHHHHHHHHHHhcCC--HHH----H-HHHHH
Confidence 366677777666555441 000 11123467788889999999999999999998873 222 2 24578
Q ss_pred HHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCC-ccccccC
Q 014196 118 MLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANT-HIPLSSS 196 (429)
Q Consensus 118 ~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~-~~~i~~~ 196 (429)
.+..+|.+.++.++..|+.++.++...+.+ +++ +.++.+..+|...+..++..|+.+|..++..+.. ... -.
T Consensus 146 ~l~~~L~~~~~~VRk~A~~al~~l~~~~p~----~v~-~~~~~l~~lL~D~d~~V~~~Al~~L~~i~~~~~~~~~~--~~ 218 (618)
T 1w63_A 146 EVEKLLKTSNSYLRKKAALCAVHVIRKVPE----LME-MFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAH--FR 218 (618)
T ss_dssp HHHHHHHSCCHHHHHHHHHHHHHHHHHCGG----GGG-GGGGGTTTSTTCCCHHHHHHHHHHHHHHCCSHHHHHHH--HH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHChH----HHH-HHHHHHHHHhCCCCHhHHHHHHHHHHHHHHhChHHHHH--HH
Confidence 899999999999999999999999876532 222 6788888899888888888888999999854311 011 13
Q ss_pred CcHHHHHHhhhc---------------CCcHHHHHHHHHHHHHhccCCCChhHHHhcCcHHHHHHhccC------Cc-ch
Q 014196 197 EILPFLVGILES---------------GSSVETKELCIGALYNLSAVLDNARPMVSNGVVHTLLKLCSM------KE-RL 254 (429)
Q Consensus 197 g~i~~Lv~lL~~---------------~~~~~~~~~A~~aL~nLs~~~~n~~~iv~~G~v~~Lv~lL~~------~~-~~ 254 (429)
..+|.|+++|.+ .++ -.+...+.+|..++...... ....++.|..++.. .. .+
T Consensus 219 ~~v~~l~~~L~~~~~~~~~~~~~~~~~~~~-~~q~~il~~L~~l~~~~~~~----~~~~~~~L~~l~~~~~~~~~~~~aV 293 (618)
T 1w63_A 219 KLVPQLVRILKNLIMSGYSPEHDVSGISDP-FLQVRILRLLRILGRNDDDS----SEAMNDILAQVATNTETSKNVGNAI 293 (618)
T ss_dssp TTHHHHHHHHHHHHHSCCCTTTCSSSSSCH-HHHHHHHHHHHHHTTTCHHH----HHTTHHHHHHHHHTSCCSSTHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCccccccCCCCC-hHHHHHHHHHHHhCCCCHHH----HHHHHHHHHHHHhccccccchHHHH
Confidence 568888888764 233 46777888888888653221 11233344444321 11 55
Q ss_pred HHHHHHHHHHhhCChhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHHHhhCCHHHHHHHHhCCchHHHHHHhhc
Q 014196 255 SEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALL 334 (429)
Q Consensus 255 ~~~a~~~L~~La~~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~ 334 (429)
+-.|+.++..+...++.+.. + ...|..++. +.++..+..|+.+|..++...+. +++ ...+.++.++.+
T Consensus 294 ~~ea~~~i~~l~~~~~l~~~-----a-~~~L~~~L~-~~d~~vr~~aL~~L~~i~~~~p~----~~~-~~~~~i~~~l~d 361 (618)
T 1w63_A 294 LYETVLTIMDIKSESGLRVL-----A-INILGRFLL-NNDKNIRYVALTSLLKTVQTDHN----AVQ-RHRSTIVDCLKD 361 (618)
T ss_dssp HHHHHHHHHHSCCCHHHHHH-----H-HHHHHHHHT-CSSTTTHHHHHHHHHHHHHHHHH----HHG-GGHHHHHHGGGS
T ss_pred HHHHHHHHHhcCCCHHHHHH-----H-HHHHHHHHh-CCCCchHHHHHHHHHHHHhhCHH----HHH-HHHHHHHHHccC
Confidence 66666666665443322221 1 235666666 56667777777777776654322 121 134555666666
Q ss_pred CCHHHHHHHHHHHHHHHh
Q 014196 335 GSPLAQRRASKLLQWFKD 352 (429)
Q Consensus 335 ~~~~~k~~A~~lL~~l~~ 352 (429)
.+..+|++|..+|..+..
T Consensus 362 ~d~~Ir~~alelL~~l~~ 379 (618)
T 1w63_A 362 LDVSIKRRAMELSFALVN 379 (618)
T ss_dssp SCHHHHHHHHHHHHHHCC
T ss_pred CChhHHHHHHHHHHHHcc
Confidence 666666666666655554
No 57
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=98.60 E-value=1.4e-08 Score=78.30 Aligned_cols=53 Identities=17% Similarity=0.042 Sum_probs=45.9
Q ss_pred CCCCcchhhhhhhhHH--HHHHHHhccc--cccCCCCCCCcccchhhHHHHHHHHHhh
Q 014196 1 MSIPSSSYMRLQFFSR--IRQFIQSKSA--RRRQNEPNHNHEKSRTLKNINCQEEKQV 54 (429)
Q Consensus 1 ~~~~~~~~~~~~TydR--Ie~W~~~g~~--~T~~~L~~~~L~PN~~Lr~lI~~W~~~~ 54 (429)
|..|++.- -|+|||| |++|+..... +|++++....|+||++||++|+.|+..+
T Consensus 24 m~dPV~~~-cGhtf~r~~I~~~l~~~~~cP~~~~~l~~~~l~pn~~L~~~i~~~~~~~ 80 (85)
T 2kr4_A 24 MTDPVRLP-SGTVMDRSIILRHLLNSPTDPFNRQMLTESMLEPVPELKEQIQAWMREK 80 (85)
T ss_dssp CSSEEECT-TSCEEEHHHHHHHHHHCSBCTTTCCBCCGGGCEECHHHHHHHHHHHHHH
T ss_pred hcCCeECC-CCCEECHHHHHHHHhcCCCCCCCcCCCChHhcchHHHHHHHHHHHHHHh
Confidence 56677655 5899999 9999985433 9999999889999999999999999877
No 58
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=98.58 E-value=1.7e-08 Score=80.04 Aligned_cols=54 Identities=15% Similarity=-0.008 Sum_probs=46.1
Q ss_pred CCCCcchhhhhhhhHH--HHHHHHhccc--cccCCCCCCCcccchhhHHHHHHHHHhh
Q 014196 1 MSIPSSSYMRLQFFSR--IRQFIQSKSA--RRRQNEPNHNHEKSRTLKNINCQEEKQV 54 (429)
Q Consensus 1 ~~~~~~~~~~~~TydR--Ie~W~~~g~~--~T~~~L~~~~L~PN~~Lr~lI~~W~~~~ 54 (429)
|..|+..--.|+|||| |++|+..... +|+++|...+|+||++||++|+.|+..+
T Consensus 32 m~dPV~~~cG~htf~r~cI~~~l~~~~~cP~~~~~l~~~~L~pn~~Lk~~I~~~~~~~ 89 (98)
T 1wgm_A 32 MCDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAER 89 (98)
T ss_dssp CSSEEECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCCTTTSEECHHHHHHHHHHHHHS
T ss_pred ccCCeECCCCCeEECHHHHHHHHHhCCCCCCCCCCCChhhceEcHHHHHHHHHHHHHc
Confidence 5667775444499999 9999986443 9999999889999999999999999987
No 59
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=98.55 E-value=1.7e-08 Score=108.18 Aligned_cols=54 Identities=19% Similarity=0.046 Sum_probs=49.0
Q ss_pred CCCCcchhhhhhhhHH--HHHHHHhccc--cccCCCCCCCcccchhhHHHHHHHHHhh
Q 014196 1 MSIPSSSYMRLQFFSR--IRQFIQSKSA--RRRQNEPNHNHEKSRTLKNINCQEEKQV 54 (429)
Q Consensus 1 ~~~~~~~~~~~~TydR--Ie~W~~~g~~--~T~~~L~~~~L~PN~~Lr~lI~~W~~~~ 54 (429)
|.-|+.-=.+|+|||| |++||.++.+ .|+++|...+++||++||+.|++||..+
T Consensus 901 M~DPVilpsG~~TydR~~I~~wl~~~~tdP~Tr~~L~~~~liPN~~Lk~~I~~w~~~~ 958 (968)
T 3m62_A 901 MKDPVILPASKMNIDRSTIKAHLLSDSTDPFNRMPLKLEDVTPNEELRQKILCFKKQK 958 (968)
T ss_dssp CSSEEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCGGGCEECHHHHHHHHHHHHHH
T ss_pred HhCCeEcCCCCEEECHHHHHHHHhcCCCCCCCCCCCCcccccccHHHHHHHHHHHHHH
Confidence 6778887777799999 9999987655 9999999999999999999999999877
No 60
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=98.53 E-value=7.3e-06 Score=89.00 Aligned_cols=310 Identities=12% Similarity=0.024 Sum_probs=195.2
Q ss_pred HHHHHHHHHhcCC--CHHHHHHHHHHHHHHhhhc-hHHHHHHHh--cCcHHHHHHhhcCC--CHHHHHHHHHHHHHhccC
Q 014196 72 VLLQKSVKRLHFG--SWEEKEMAAKEIEKLAKED-VKIKKLMAE--LGVIQMLVSMVSTE--VIGRRRAAIKALIQLANG 144 (429)
Q Consensus 72 ~~l~~lv~~L~~~--~~~~~~~Aa~~L~~La~~~-~~~r~~i~~--~G~i~~Lv~lL~s~--~~~~~~~A~~aL~nLa~~ 144 (429)
..++.++..+.++ ++..+..++..+..++..- ++ .+.. ...++.+...+.++ +..++..|+.+|.++...
T Consensus 128 ~ll~~l~~~l~~~~~~~~~r~~al~~l~~l~~~~~~~---~~~~~~~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~ 204 (876)
T 1qgr_A 128 ELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPE---QLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEF 204 (876)
T ss_dssp THHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCHH---HHGGGHHHHHHHHHHHHSTTCSCHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcCHh---hHHhHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 3578888889888 8889999999999998652 21 1222 34577788888876 689999999999998754
Q ss_pred CCch-HHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCc-cccccCCcHHHHHHhhhcCCcHHHHHHHHHHH
Q 014196 145 TYTN-KAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTH-IPLSSSEILPFLVGILESGSSVETKELCIGAL 222 (429)
Q Consensus 145 ~~~n-k~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~-~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL 222 (429)
-..+ .........++.+...+...+.+.+..++.+|..+....... ........++.+...+.+.+. .++..|+..+
T Consensus 205 ~~~~~~~~~~~~~il~~l~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~v~~~al~~l 283 (876)
T 1qgr_A 205 TKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDID-EVALQGIEFW 283 (876)
T ss_dssp CHHHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSGGGCHHHHTTTHHHHHHHHHTCSSH-HHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCch-HHHHHHHHHH
Confidence 2111 111111124556666677777888888888888887532111 011123678888887766665 6888899888
Q ss_pred HHhccCCC-------------------ChhHH--HhcCcHHHHHHhccC-------Cc-chHHHHHHHHHHhhCChhcHH
Q 014196 223 YNLSAVLD-------------------NARPM--VSNGVVHTLLKLCSM-------KE-RLSEKSLATLGNLVVTSTGKK 273 (429)
Q Consensus 223 ~nLs~~~~-------------------n~~~i--v~~G~v~~Lv~lL~~-------~~-~~~~~a~~~L~~La~~~e~~~ 273 (429)
.+++.... ....+ .-...+|.++..|.. .+ .++..+..+|..++..-. .
T Consensus 284 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~l~~~~~d~~~~~~~~r~~a~~~l~~l~~~~~--~ 361 (876)
T 1qgr_A 284 SNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCE--D 361 (876)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCCSSCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCCHHHHHHHHHHHHHHHHG--G
T ss_pred HHHHHHHHhHhhhhccccccCCCccchhHHHHHHHHHHHhHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHCc--H
Confidence 88875310 00111 113467778887752 12 677778888888776321 1
Q ss_pred HHhcCCCChHHHHHhcccCCChhHHHHHHHHHHHHhhCC-HHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHh
Q 014196 274 AMEDSPLVPESLIEILTWEEKPKCQELSAYILMILAHQS-SEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKD 352 (429)
Q Consensus 274 ~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~~~-~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~ 352 (429)
.+.. .+.+.+.+.+. +.+...++.|+.+|..++.+. ++...... ..++|.|+..+.+.++.++..|+|.|..+.+
T Consensus 362 ~~~~--~~l~~l~~~l~-~~~~~~r~~a~~~l~~i~~~~~~~~~~~~~-~~~l~~l~~~l~d~~~~vr~~a~~~l~~~~~ 437 (876)
T 1qgr_A 362 DIVP--HVLPFIKEHIK-NPDWRYRDAAVMAFGCILEGPEPSQLKPLV-IQAMPTLIELMKDPSVVVRDTAAWTVGRICE 437 (876)
T ss_dssp GGHH--HHHHHHHHHTT-CSSHHHHHHHHHHHHHTSSSSCHHHHHHHH-HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHH
T ss_pred hhHH--HHHHHHHHHcc-CCChHHHHHHHHHHHHHHcCCCHHHHHHHH-HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 1221 23345667776 678899999999999998753 23222222 3479999999998899999999999988886
Q ss_pred ccccCCCCCCCCCcccc-----ccCCCCChhhhHHHHHHHHHHHHHH
Q 014196 353 ERQAKMGPHSGPQTRRV-----SIGSPVSPREAQEGKKMMKNLVQQS 394 (429)
Q Consensus 353 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~k~~l~~~~~~~ 394 (429)
.-.... . ..|....+ ..... ..+.+..+-+++..+++.+
T Consensus 438 ~~~~~~-~-~~~~l~~~l~~l~~~l~~-~~~v~~~a~~al~~l~~~~ 481 (876)
T 1qgr_A 438 LLPEAA-I-NDVYLAPLLQCLIEGLSA-EPRVASNVCWAFSSLAEAA 481 (876)
T ss_dssp HCGGGT-S-STTTHHHHHHHHHHHTTS-CHHHHHHHHHHHHHHHHHH
T ss_pred hCchhc-c-cHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHh
Confidence 421100 0 01122221 11111 2555666667777776654
No 61
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=98.53 E-value=1.5e-06 Score=94.44 Aligned_cols=272 Identities=11% Similarity=0.086 Sum_probs=175.8
Q ss_pred HHHHHHHHhcCC--CHHHHHHHHHHHHHHhhhchHH-HHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchH
Q 014196 73 LLQKSVKRLHFG--SWEEKEMAAKEIEKLAKEDVKI-KKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNK 149 (429)
Q Consensus 73 ~l~~lv~~L~~~--~~~~~~~Aa~~L~~La~~~~~~-r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk 149 (429)
.++.++..+..+ +...+..|+..+..++..-..+ .........++.+...+.+.+.+++..++.+|..++......-
T Consensus 173 ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~ 252 (876)
T 1qgr_A 173 ILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYM 252 (876)
T ss_dssp HHHHHHHHHSTTCSCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSGGGC
T ss_pred HHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 455566677765 5788899999999877532211 0011111257778888888899999999999999886543221
Q ss_pred HHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCC------------C----ccc--cc---cCCcHHHHHHhhhc
Q 014196 150 AIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLAN------------T----HIP--LS---SSEILPFLVGILES 208 (429)
Q Consensus 150 ~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~------------~----~~~--i~---~~g~i~~Lv~lL~~ 208 (429)
...+....++.+...+...+..++..+...+.+++.... . +.. +. -...+|.+++.+..
T Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~v~~~al~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~l~~ 332 (876)
T 1qgr_A 253 ETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTK 332 (876)
T ss_dssp HHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSSCCCCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHhHhhhhccccccCCCccchhHHHHHHHHHHHhHHHHHHhhc
Confidence 222233567777777766677788888777777764310 0 000 00 12356777777753
Q ss_pred C------CcHHHHHHHHHHHHHhccCCCChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCCh--hcHHHHhcCC
Q 014196 209 G------SSVETKELCIGALYNLSAVLDNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTS--TGKKAMEDSP 279 (429)
Q Consensus 209 ~------~~~~~~~~A~~aL~nLs~~~~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~--e~~~~i~~~~ 279 (429)
. +....+..|..+|..++..-. ..++ ..+++.+...+.+.+ .+++.++.+|..++... +.......
T Consensus 333 ~~~d~~~~~~~~r~~a~~~l~~l~~~~~--~~~~-~~~l~~l~~~l~~~~~~~r~~a~~~l~~i~~~~~~~~~~~~~~-- 407 (876)
T 1qgr_A 333 QDENDDDDDWNPCKAAGVCLMLLATCCE--DDIV-PHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVI-- 407 (876)
T ss_dssp CCSSCCTTCCCHHHHHHHHHHHHHHHHG--GGGH-HHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHH--
T ss_pred ccccccccccHHHHHHHHHHHHHHHHCc--HhhH-HHHHHHHHHHccCCChHHHHHHHHHHHHHHcCCCHHHHHHHHH--
Confidence 1 122578888889988876322 1222 245666777777766 88899999999998742 32222222
Q ss_pred CChHHHHHhcccCCChhHHHHHHHHHHHHhhCCHHH---HHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHhc
Q 014196 280 LVPESLIEILTWEEKPKCQELSAYILMILAHQSSEQ---RDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKDE 353 (429)
Q Consensus 280 ~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~~~~~~---~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~~ 353 (429)
.+.+.|+..+. +.++..+..|+.+|..++...+.. ...+ ..+++.|+..+.+. ++++..|++.|..+.+.
T Consensus 408 ~~l~~l~~~l~-d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~l--~~~l~~l~~~l~~~-~~v~~~a~~al~~l~~~ 480 (876)
T 1qgr_A 408 QAMPTLIELMK-DPSVVVRDTAAWTVGRICELLPEAAINDVYL--APLLQCLIEGLSAE-PRVASNVCWAFSSLAEA 480 (876)
T ss_dssp HHHHHHHHHHT-CSSHHHHHHHHHHHHHHHHHCGGGTSSTTTH--HHHHHHHHHHTTSC-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHhCchhcccHHHH--HHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHH
Confidence 24457888887 788999999999999998642211 0111 24677888888764 88999999988887754
No 62
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=98.52 E-value=2.5e-08 Score=79.28 Aligned_cols=53 Identities=17% Similarity=0.065 Sum_probs=45.8
Q ss_pred CCCCcchhhhhhhhHH--HHHHHHhccc--cccCCCCCCCcccchhhHHHHHHHHHhh
Q 014196 1 MSIPSSSYMRLQFFSR--IRQFIQSKSA--RRRQNEPNHNHEKSRTLKNINCQEEKQV 54 (429)
Q Consensus 1 ~~~~~~~~~~~~TydR--Ie~W~~~g~~--~T~~~L~~~~L~PN~~Lr~lI~~W~~~~ 54 (429)
|..|++.- -|+|||| |++|+..... +|+++|...+|+||++||++|+.|+..|
T Consensus 39 m~dPV~~~-cGhtf~r~~I~~~l~~~~~cP~~~~~l~~~~L~pn~~Lk~~I~~~~~~~ 95 (100)
T 2kre_A 39 MTDPVRLP-SGTIMDRSIILRHLLNSPTDPFNRQTLTESMLEPVPELKEQIQAWMREK 95 (100)
T ss_dssp CSSEEEET-TTEEEEHHHHHHHTTSCSBCSSSCCBCCTTSSEECHHHHHHHHHHHHTT
T ss_pred ccCCeECC-CCCEEchHHHHHHHHcCCCCCCCCCCCChhhceECHHHHHHHHHHHHHh
Confidence 55677655 5899999 9999975433 9999999889999999999999999887
No 63
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=98.50 E-value=2.3e-06 Score=90.14 Aligned_cols=261 Identities=13% Similarity=0.083 Sum_probs=163.2
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHH
Q 014196 71 CVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKA 150 (429)
Q Consensus 71 ~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~ 150 (429)
...++.+.+.|.+.++.+|+.|+..+..+.+.+++... +.++.|..+|.+.|+.++..|+.+|..++..+.+...
T Consensus 141 ~~l~~~l~~~L~~~~~~VRk~A~~al~~l~~~~p~~v~-----~~~~~l~~lL~D~d~~V~~~Al~~L~~i~~~~~~~~~ 215 (618)
T 1w63_A 141 RDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELME-----MFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLA 215 (618)
T ss_dssp HHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHCGGGGG-----GGGGGTTTSTTCCCHHHHHHHHHHHHHHCCSHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHChHHHH-----HHHHHHHHHhCCCCHhHHHHHHHHHHHHHHhChHHHH
Confidence 34578888889999999999999999999988775322 6788899999999999999999999999876421111
Q ss_pred HHHhcCccchhhhhccC---------------CCHHHHHHHHHHHHHhhccCC---------------------C-----
Q 014196 151 IMVEAGILTKLPKNVDA---------------VDESTRHEFGELLLSLSSLAN---------------------T----- 189 (429)
Q Consensus 151 ~iv~~G~i~~Lv~lL~~---------------~~~~~~~~aa~~L~~Ls~~~~---------------------~----- 189 (429)
.+ ...+|.++.+|.. .++-.+.....+|..++..+. +
T Consensus 216 ~~--~~~v~~l~~~L~~~~~~~~~~~~~~~~~~~~~~q~~il~~L~~l~~~~~~~~~~~~~~L~~l~~~~~~~~~~~~aV 293 (618)
T 1w63_A 216 HF--RKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAI 293 (618)
T ss_dssp HH--HTTHHHHHHHHHHHHHSCCCTTTCSSSSSCHHHHHHHHHHHHHHTTTCHHHHHTTHHHHHHHHHTSCCSSTHHHHH
T ss_pred HH--HHHHHHHHHHHHHHHcCCCCccccccCCCCChHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhccccccchHHHH
Confidence 11 1344545444431 122233333333333332110 0
Q ss_pred -------------ccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCCCChhHHHhcCcHHHHHHhccCCc-chH
Q 014196 190 -------------HIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVLDNARPMVSNGVVHTLLKLCSMKE-RLS 255 (429)
Q Consensus 190 -------------~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~n~~~iv~~G~v~~Lv~lL~~~~-~~~ 255 (429)
...+ ...++..|..+|.+.++ .++..|+.+|..++... ..++ ....+.++.++.|++ .++
T Consensus 294 ~~ea~~~i~~l~~~~~l-~~~a~~~L~~~L~~~d~-~vr~~aL~~L~~i~~~~---p~~~-~~~~~~i~~~l~d~d~~Ir 367 (618)
T 1w63_A 294 LYETVLTIMDIKSESGL-RVLAINILGRFLLNNDK-NIRYVALTSLLKTVQTD---HNAV-QRHRSTIVDCLKDLDVSIK 367 (618)
T ss_dssp HHHHHHHHHHSCCCHHH-HHHHHHHHHHHHTCSST-TTHHHHHHHHHHHHHHH---HHHH-GGGHHHHHHGGGSSCHHHH
T ss_pred HHHHHHHHHhcCCCHHH-HHHHHHHHHHHHhCCCC-chHHHHHHHHHHHHhhC---HHHH-HHHHHHHHHHccCCChhHH
Confidence 0000 01256677777777666 57777888887777532 1222 235667888888876 889
Q ss_pred HHHHHHHHHhhCChhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHHHhhC---CH-HHHHHH----HhCC----
Q 014196 256 EKSLATLGNLVVTSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMILAHQ---SS-EQRDKM----AKSG---- 323 (429)
Q Consensus 256 ~~a~~~L~~La~~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~~---~~-~~~~~i----~~~G---- 323 (429)
..++.+|..++.... ...++ ..|.+++. +.+...+..++.++..+|.. +. .+...+ ...|
T Consensus 368 ~~alelL~~l~~~~n-v~~iv------~eL~~~l~-~~d~e~r~~~v~~I~~la~k~~~~~~~~v~~ll~lL~~~~~~v~ 439 (618)
T 1w63_A 368 RRAMELSFALVNGNN-IRGMM------KELLYFLD-SCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVR 439 (618)
T ss_dssp HHHHHHHHHHCCSSS-THHHH------HHHHHHHH-HCCHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTGGGSC
T ss_pred HHHHHHHHHHccccc-HHHHH------HHHHHHHH-hCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHhccchhH
Confidence 999999999887432 23333 35667776 56777888888888777752 10 111111 1111
Q ss_pred --------------------chHHHHHHhhc--CCHHHHHHHHHHHHHHHh
Q 014196 324 --------------------IVHVSLQLALL--GSPLAQRRASKLLQWFKD 352 (429)
Q Consensus 324 --------------------~v~~L~~ll~~--~~~~~k~~A~~lL~~l~~ 352 (429)
+++.|++.+.. ......+.+.|+|+.+++
T Consensus 440 ~~~~~~l~~ii~~~p~l~~~~v~~L~~~l~~~~~~~~~~~~~~wilGEy~~ 490 (618)
T 1w63_A 440 DDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYGD 490 (618)
T ss_dssp SSHHHHHHHHHHHSCSTHHHHHHHHHHHHHHCCSCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcChhHHHHHHHHHHHHHhcccccHHHHHHHHHHHhhhHH
Confidence 56667777775 234444568899888886
No 64
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=98.50 E-value=4.4e-06 Score=75.34 Aligned_cols=208 Identities=14% Similarity=0.103 Sum_probs=152.0
Q ss_pred hhHHHHHHHHHhhcccccCCCCCCCChhhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhc-hHHHHHHHhcCcHHHHH
Q 014196 42 TLKNINCQEEKQVIIEEKNHEQSDIEEDDCVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKED-VKIKKLMAELGVIQMLV 120 (429)
Q Consensus 42 ~Lr~lI~~W~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~-~~~r~~i~~~G~i~~Lv 120 (429)
-+|..+..|.-.-.++-+ ......+..++..|+..|+..+.+++..|..+-+.- ...+...++ ..+|.++
T Consensus 11 ~lre~L~sWkiK~a~ela--------~~~e~~l~~L~~LL~dkD~~vk~raL~~LeellK~~~~~l~~~~~e-~~Ld~iI 81 (265)
T 3b2a_A 11 ELRELVLSWQILDAVSLA--------LEDKRALFLILELAGEDDETTRLRAFVALGEILKRADSDLRMMVLE-RHLDVFI 81 (265)
T ss_dssp HHHHHHHTTCHHHHHHHH--------HHCHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHH-HHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHH--------HhchhHHHHHHHHHhccchHHHHHHHHHHHHHHHhccccccHHHHH-HHHHHHH
Confidence 477778888753311111 113456888999999999999999999999998873 234444444 3599999
Q ss_pred HhhcCCCHHHHHHHHHHHHHhccCCCchHHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccccccCCcHH
Q 014196 121 SMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPLSSSEILP 200 (429)
Q Consensus 121 ~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~ 200 (429)
.++.+.|..+.-.|+.+|..|-.+.+-........ +..|..++.+++.-.+.+++..+..+..... ..+.+.
T Consensus 82 ~llk~~dEkval~A~r~L~~LLe~vpL~~~~y~Kl--~~aL~dlik~~~~il~~eaae~Lgklkv~~~------~~~V~~ 153 (265)
T 3b2a_A 82 NALSQENEKVTIKALRALGYLVKDVPMGSKTFLKA--AKTLVSLLESPDDMMRIETIDVLSKLQPLED------SKLVRT 153 (265)
T ss_dssp HTCCSTTHHHHHHHHHHHHHHHTTCCBCHHHHHHH--HHHHHHHTTSCCHHHHHHHHHHHHHCCBSCC------CHHHHH
T ss_pred HHHhccchhHHHHHHHHHHHHHcCCCCCHHHHHHH--HHHHHHHhcCCCchHHHHHHHHhCcCCcccc------hHHHHH
Confidence 99999999999999999999987764344444432 3446788888888889999999998832222 234577
Q ss_pred HHHHhhhcCCcHHHHHHHHHHHHHhccCCCChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCCh
Q 014196 201 FLVGILESGSSVETKELCIGALYNLSAVLDNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTS 269 (429)
Q Consensus 201 ~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~ 269 (429)
.|.+++.+.+. ++|..++++|.|++..+++...+ .+++.-+-++|+..+ .+++.|+.+|..+...|
T Consensus 154 ~l~sLl~Skd~-~vK~agl~~L~eia~~S~D~~i~--~~I~~eI~elL~~eD~~l~e~aLd~Le~ils~p 220 (265)
T 3b2a_A 154 YINELVVSPDL-YTKVAGFCLFLNMLNSSADSGHL--TLILDEIPSLLQNDNEFIVELALDVLEKALSFP 220 (265)
T ss_dssp HHHHHHTCSSH-HHHHHHHHHHHHHGGGCSSCCCG--GGTTTTHHHHHTCSCHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHhCCCh-hHHHHHHHHHHHhhcccCCHHHH--HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCc
Confidence 88999977776 89999999999999866554322 234555666777666 89999999999888753
No 65
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=98.47 E-value=2.1e-06 Score=85.92 Aligned_cols=259 Identities=10% Similarity=0.044 Sum_probs=170.3
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCC--CHHHHHHHHHHHHHhccCCC-----
Q 014196 74 LQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTE--VIGRRRAAIKALIQLANGTY----- 146 (429)
Q Consensus 74 l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~--~~~~~~~A~~aL~nLa~~~~----- 146 (429)
+..++..+.+++.+.|..|-..|..+.+.+ ..|.+..|+.+|.+. ++.+|..|+..|.|+.....
T Consensus 3 l~~~L~~~~s~d~~~r~~Ae~~L~~~~~~~--------~~~~~~~L~~il~~~~~~~~vR~~a~~~Lk~~i~~~~~~~~~ 74 (462)
T 1ibr_B 3 LITILEKTVSPDRLELEAAQKFLERAAVEN--------LPTFLVELSRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKA 74 (462)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHCCSSHHHHH
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHhhC--------hHHHHHHHHHHHHcCCCChHHHHHHHHHHHHhccccchHHHH
Confidence 456777777889999999999998866421 124567778888764 68999999999999864421
Q ss_pred -----------chHHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcC--CcHH
Q 014196 147 -----------TNKAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESG--SSVE 213 (429)
Q Consensus 147 -----------~nk~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~--~~~~ 213 (429)
+.+..|. ..|+..+.+.+... ..++.++..++..+.... .-.+.+|.|++.+.++ +. .
T Consensus 75 ~~~~~~~~l~~~~~~~ik-----~~ll~~l~~~~~~v-~~~~~~i~~ia~~~~~~~--~w~~ll~~L~~~l~~~~~~~-~ 145 (462)
T 1ibr_B 75 QYQQRWLAIDANARREVK-----NYVLQTLGTETYRP-SSASQCVAGIACAEIPVN--QWPELIPQLVANVTNPNSTE-H 145 (462)
T ss_dssp HHHHHHHTSCHHHHHHHH-----HHHHHHTTCCCSSS-CSHHHHHHHHHHHHGGGT--CCTTHHHHHHHHHHCTTCCH-H
T ss_pred HHHhhhhcCCHHHHHHHH-----HHHHHHhCCCCchh-hHHHHHHHHHHHHhcccc--ccHHHHHHHHHHhccCCCCH-H
Confidence 1122221 22455565555555 567777888775431110 1256899999999987 65 7
Q ss_pred HHHHHHHHHHHhccCC--CChhHHHhcCcHHHHHHhccCC--c-chHHHHHHHHHHhhCC-hhcH--HHHhcCCCChHHH
Q 014196 214 TKELCIGALYNLSAVL--DNARPMVSNGVVHTLLKLCSMK--E-RLSEKSLATLGNLVVT-STGK--KAMEDSPLVPESL 285 (429)
Q Consensus 214 ~~~~A~~aL~nLs~~~--~n~~~iv~~G~v~~Lv~lL~~~--~-~~~~~a~~~L~~La~~-~e~~--~~i~~~~~i~~~L 285 (429)
.+..|+.+|..++..- +...... ..+++.++.+|.+. + .++..|+.++.++... .+.- ..+. ..+.+.|
T Consensus 146 ~r~~al~~l~~l~~~~~~~~~~~~~-~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~--~~l~~~l 222 (462)
T 1ibr_B 146 MKESTLEAIGYICQDIDPEQLQDKS-NEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESER--HFIMQVV 222 (462)
T ss_dssp HHHHHHHHHHHHHHHSCGGGTGGGH-HHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTHHHHTSHHHH--HHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCchhhHhHH-HHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhHHH--HHHHHHH
Confidence 8999999999998632 1111122 35778888888876 4 7888899999887642 1110 0010 1123355
Q ss_pred HHhcccCCChhHHHHHHHHHHHHhhCCHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHhc
Q 014196 286 IEILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKDE 353 (429)
Q Consensus 286 v~~L~~~~s~~~~e~A~~~L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~~ 353 (429)
.+.+. +.++..+..++.+|..++...++.-...+..++++.++..+.+.++.++..|.+.+..+.+.
T Consensus 223 ~~~~~-~~~~~vr~~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~a~~~l~~~~~~ 289 (462)
T 1ibr_B 223 CEATQ-CPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDE 289 (462)
T ss_dssp HHHTT-CSSHHHHHHHHHHHHHHHHHCGGGCTTTTTTTHHHHHHHHHHCSSHHHHHHHHHHHHHHHHH
T ss_pred HHhcC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHH
Confidence 66666 67888999999999988864332111111126778888888888899999999877777653
No 66
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=98.44 E-value=7e-08 Score=84.57 Aligned_cols=53 Identities=13% Similarity=0.071 Sum_probs=46.5
Q ss_pred CCCCcchhhhhhhhHH--HHHHHHh-cc-c-cccCCCCCCCcccchhhHHHHHHHHHhh
Q 014196 1 MSIPSSSYMRLQFFSR--IRQFIQS-KS-A-RRRQNEPNHNHEKSRTLKNINCQEEKQV 54 (429)
Q Consensus 1 ~~~~~~~~~~~~TydR--Ie~W~~~-g~-~-~T~~~L~~~~L~PN~~Lr~lI~~W~~~~ 54 (429)
|..|++. --|+|||| |++|+.. |. + +|+++|...+|+||++||++|+.|+..|
T Consensus 116 m~DPV~~-~~Ghtfer~~I~~~l~~~~~tcP~t~~~l~~~~L~pN~~Lk~~Ie~~~~~~ 173 (179)
T 2f42_A 116 MREPCIT-PSGITYDRKDIEEHLQRVGHFDPVTRSPLTQDQLIPNLAMKEVIDAFIQEN 173 (179)
T ss_dssp CSSEEEC-TTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCEECHHHHHHHHHHHHHC
T ss_pred CCCCeEC-CCCCEECHHHHHHHHHhCCCCCCCCcCCCChhhCcchHHHHHHHHHHHHHC
Confidence 5667776 45899999 9999987 45 3 9999999889999999999999999988
No 67
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=98.40 E-value=6.4e-06 Score=89.25 Aligned_cols=307 Identities=8% Similarity=0.096 Sum_probs=188.9
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHhhhch-H-HHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCc---
Q 014196 73 LLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDV-K-IKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYT--- 147 (429)
Q Consensus 73 ~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~-~-~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~--- 147 (429)
.++.+...+.+.++..+..|+..+..++.... + ....+ ..+++.|+..+.++++.++..++++|..++..-..
T Consensus 370 l~~~l~~~l~~~~~~~r~~a~~~l~~i~~~~~~~~~~~~l--~~il~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~ 447 (861)
T 2bpt_A 370 VLEFVEQNITADNWRNREAAVMAFGSIMDGPDKVQRTYYV--HQALPSILNLMNDQSLQVKETTAWCIGRIADSVAESID 447 (861)
T ss_dssp HHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHH--HHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHGGGSC
T ss_pred HHHHHHHHcCCCChhHHHHHHHHHHHHHcCCCHHHHHHHH--HHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHhhhhcC
Confidence 45556666777889999999999999986432 2 22222 24689999999999999999999999998754210
Q ss_pred hHHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCC--Cccccc--cCCcHHHHHHhhhcCCc-HHHHHHHHHHH
Q 014196 148 NKAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLAN--THIPLS--SSEILPFLVGILESGSS-VETKELCIGAL 222 (429)
Q Consensus 148 nk~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~--~~~~i~--~~g~i~~Lv~lL~~~~~-~~~~~~A~~aL 222 (429)
.... -...++.++..+... ...+..++.+|.+++.... ....+. -...++.|++++.+.+. ..++..++.+|
T Consensus 448 ~~~~--~~~~l~~l~~~l~~~-~~v~~~a~~al~~l~~~~~~~~~~~l~~~~~~il~~L~~~l~~~d~~~~vr~~a~~al 524 (861)
T 2bpt_A 448 PQQH--LPGVVQACLIGLQDH-PKVATNCSWTIINLVEQLAEATPSPIYNFYPALVDGLIGAANRIDNEFNARASAFSAL 524 (861)
T ss_dssp TTTT--HHHHHHHHHHHHTSC-HHHHHHHHHHHHHHHHHHSSSSSCGGGGGHHHHHHHHHHHHTCSCCGGGHHHHHHHHH
T ss_pred CHHH--HHHHHHHHHHHhccC-hHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHhCcCcchHHHHHHHHHH
Confidence 0111 123466677777664 7788888888888875421 011221 13457788888875432 36888899999
Q ss_pred HHhccCCCC-hhHHHhcCcHHHHHHhccCC---------------c-chHHHHHHHHHHhhCC-hhcHHHHhcCCCChHH
Q 014196 223 YNLSAVLDN-ARPMVSNGVVHTLLKLCSMK---------------E-RLSEKSLATLGNLVVT-STGKKAMEDSPLVPES 284 (429)
Q Consensus 223 ~nLs~~~~n-~~~iv~~G~v~~Lv~lL~~~---------------~-~~~~~a~~~L~~La~~-~e~~~~i~~~~~i~~~ 284 (429)
..+...... ....+ ...+|.++..+.+. . .++..++.+|..++.. ...-.... +.+.+.
T Consensus 525 ~~l~~~~~~~~~~~~-~~l~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~--~~l~~~ 601 (861)
T 2bpt_A 525 TTMVEYATDTVAETS-ASISTFVMDKLGQTMSVDENQLTLEDAQSLQELQSNILTVLAAVIRKSPSSVEPVA--DMLMGL 601 (861)
T ss_dssp HHHHHHCCGGGHHHH-HHHHHHHHHHHHHHTTSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGTGGGH--HHHHHH
T ss_pred HHHHHHcchhhHHHH-HHHHHHHHHHHHHHHhhhcccCChhhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH--HHHHHH
Confidence 998864332 22222 24677777766421 1 4566788888887752 22111111 123346
Q ss_pred HHHhcccCCCh-hHHHHHHHHHHHHhhCC-HHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHhccccCCCCCC
Q 014196 285 LIEILTWEEKP-KCQELSAYILMILAHQS-SEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKDERQAKMGPHS 362 (429)
Q Consensus 285 Lv~~L~~~~s~-~~~e~A~~~L~~L~~~~-~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~~~~~~~~~~~ 362 (429)
+++.+. ..+. ..++.+..++..++... ......+- .++|.|+..+...++.++..|..++..+.+.-. ...
T Consensus 602 l~~~l~-~~~~~~v~~~~~~~l~~l~~~~~~~~~~~l~--~i~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~----~~~ 674 (861)
T 2bpt_A 602 FFRLLE-KKDSAFIEDDVFYAISALAASLGKGFEKYLE--TFSPYLLKALNQVDSPVSITAVGFIADISNSLE----EDF 674 (861)
T ss_dssp HHHHHH-STTGGGTHHHHHHHHHHHHHHHGGGGHHHHH--HHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHTG----GGG
T ss_pred HHHHHc-cCCCCcHHHHHHHHHHHHHHHHhhhHHHHHH--HHHHHHHHHhccccHHHHHHHHHHHHHHHHHhc----hhc
Confidence 677776 4445 78888888888887531 22222222 378889988877778889888888877765321 111
Q ss_pred CCCcccc-----c-cCCC-CChhhhHHHHHHHHHHHHHH
Q 014196 363 GPQTRRV-----S-IGSP-VSPREAQEGKKMMKNLVQQS 394 (429)
Q Consensus 363 ~~~~~~~-----~-~~~~-~~~~~~~~~k~~l~~~~~~~ 394 (429)
.|.+..+ . .... ...+.+..+-.++..|++.+
T Consensus 675 ~~~~~~l~~~l~~~l~~~~~~~~vr~~~~~~l~~l~~~~ 713 (861)
T 2bpt_A 675 RRYSDAMMNVLAQMISNPNARRELKPAVLSVFGDIASNI 713 (861)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHhCCccccHhhhHHHHHHHHHHHHHh
Confidence 1122221 1 1112 13556777777777777654
No 68
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=98.39 E-value=6e-07 Score=101.84 Aligned_cols=268 Identities=11% Similarity=0.098 Sum_probs=177.7
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHH
Q 014196 72 VLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAI 151 (429)
Q Consensus 72 ~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~ 151 (429)
..+..++..+.+++.+.|..|...|.+..+.+...-..-.....++.|+..|.+.++.+|..|+.+|.+++.... . ..
T Consensus 6 ~~l~~lL~~l~s~d~~~R~~A~~~L~~~l~~~~~~~~~~~~~~il~~Ll~~L~d~~~~vR~~A~~~L~~l~~~~~-~-~~ 83 (1230)
T 1u6g_C 6 YHISNLLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVK-E-YQ 83 (1230)
T ss_dssp HHHHHHHHHTTCSSHHHHHHHHHHHHHHTSSSCCSCCTTHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTSC-H-HH
T ss_pred hHHHHHHHhcCCCCHhHHHHHHHHHHHHHcccccCCChhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhCC-H-HH
Confidence 458889999999999999999999988664321100000012347889999999999999999999999987642 2 11
Q ss_pred HHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCc----ccc--ccCCcHHHHHHhhhc-CCcHHHHHHHHHHHHH
Q 014196 152 MVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTH----IPL--SSSEILPFLVGILES-GSSVETKELCIGALYN 224 (429)
Q Consensus 152 iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~----~~i--~~~g~i~~Lv~lL~~-~~~~~~~~~A~~aL~n 224 (429)
+ ...++.|...+.+.+...|..++.+|..++..-... ... .....+|.|.+.+.+ ++. ..+..|+.+|.+
T Consensus 84 ~--~~i~~~Ll~~l~d~~~~vR~~a~~~L~~i~~~l~~~~~~~~~~~~~~~~llp~L~~~l~~~~~~-~~~~~al~~l~~ 160 (1230)
T 1u6g_C 84 V--ETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDV-SVQLEALDIMAD 160 (1230)
T ss_dssp H--HHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-----CCTHHHHHHHHHHHHHHHHSCCSCH-HHHHHHHHHHHH
T ss_pred H--HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCCcccccchHHHHHHHHHHHHHHHHcCCCch-HHHHHHHHHHHH
Confidence 1 124556677777767777777777888877433211 000 124578899998884 555 789999999999
Q ss_pred hccC-CCChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCChhcHHHHhcCCCChHHHHHhcccCCChhHHHHHH
Q 014196 225 LSAV-LDNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSA 302 (429)
Q Consensus 225 Ls~~-~~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~ 302 (429)
++.. +...... -...++.++..|.+++ .+++.|+.+|..++..... .+ ...+.+.+++.|....+...+..++
T Consensus 161 ~~~~~~~~l~~~-~~~ll~~l~~~L~~~~~~vR~~a~~al~~l~~~~~~--~~--~~~~l~~l~~~L~~~~~~~~r~~a~ 235 (1230)
T 1u6g_C 161 MLSRQGGLLVNF-HPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGN--IV--FVDLIEHLLSELSKNDSMSTTRTYI 235 (1230)
T ss_dssp HHHHTCSSCTTT-HHHHHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC--------CTTHHHHHHHHHHHTCSSCSCTTHH
T ss_pred HHHHhHhHHHHH-HHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhcCH--HH--HHHHHHHHHHHhccCCchhHHHHHH
Confidence 8853 2222111 1356777778887765 8899999999998874321 12 2334457777776322334566677
Q ss_pred HHHHHHhhCCHHHHHHHHh--CCchHHHHHHhhcCCHHHHHHHHHHHHHHHh
Q 014196 303 YILMILAHQSSEQRDKMAK--SGIVHVSLQLALLGSPLAQRRASKLLQWFKD 352 (429)
Q Consensus 303 ~~L~~L~~~~~~~~~~i~~--~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~ 352 (429)
.++..++...+. .+.. ..++|.++..+.+.++.+++.|.+.+..+.+
T Consensus 236 ~~l~~l~~~~~~---~~~~~l~~l~~~ll~~l~d~~~~vR~~a~~~l~~l~~ 284 (1230)
T 1u6g_C 236 QCIAAISRQAGH---RIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVR 284 (1230)
T ss_dssp HHHHHHHHHSSG---GGTTSCTTHHHHHHHHHSSCCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHH---HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 888877753221 1111 4688999999988888889988888777665
No 69
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=98.38 E-value=3.5e-05 Score=83.41 Aligned_cols=272 Identities=12% Similarity=0.045 Sum_probs=177.3
Q ss_pred HHHHHHHHHHhcCC-CHHHHHHHHHHHHHHhhhch-HHHHHHH--hcCcHHHHHHhhcCC--CHHHHHHHHHHHHHhccC
Q 014196 71 CVLLQKSVKRLHFG-SWEEKEMAAKEIEKLAKEDV-KIKKLMA--ELGVIQMLVSMVSTE--VIGRRRAAIKALIQLANG 144 (429)
Q Consensus 71 ~~~l~~lv~~L~~~-~~~~~~~Aa~~L~~La~~~~-~~r~~i~--~~G~i~~Lv~lL~s~--~~~~~~~A~~aL~nLa~~ 144 (429)
...++.++..+.++ ++..+..++..+..++++-. +.+ .+. -...++.++..+.++ ++.++..|+.+|.++...
T Consensus 133 ~~ll~~L~~~l~~~~~~~~r~~al~~l~~l~~~~~~~~~-~~~~~~~~ll~~l~~~l~~~~~~~~vr~~al~~l~~~~~~ 211 (861)
T 2bpt_A 133 PELMKIMVDNTGAEQPENVKRASLLALGYMCESADPQSQ-ALVSSSNNILIAIVQGAQSTETSKAVRLAALNALADSLIF 211 (861)
T ss_dssp HHHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHTSSTTSS-TTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcCChhhh-HHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 45688888999888 88899999999998886421 111 000 123467778888876 899999999999987432
Q ss_pred CCch-HHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCcccccc--C-CcHHHHHHhhhcCCcHHHHHHHHH
Q 014196 145 TYTN-KAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPLSS--S-EILPFLVGILESGSSVETKELCIG 220 (429)
Q Consensus 145 ~~~n-k~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~~--~-g~i~~Lv~lL~~~~~~~~~~~A~~ 220 (429)
-+.+ .........++.|...+.+.+.+.|..++.+|..+..... ..+.. . ..++.+...+.+.+. .++..|+.
T Consensus 212 ~~~~~~~~~~~~~ll~~l~~~~~~~~~~~r~~a~~~l~~l~~~~~--~~~~~~l~~~l~~~~~~~~~~~~~-~vr~~a~~ 288 (861)
T 2bpt_A 212 IKNNMEREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKYY--TFMKPYMEQALYALTIATMKSPND-KVASMTVE 288 (861)
T ss_dssp CHHHHTSHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHG--GGCHHHHHHTHHHHHHHHTTCSSH-HHHHHHHH
T ss_pred HHHHccChhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHcCCcH-HHHHHHHH
Confidence 1111 0000011245556666777778888888888888874321 11211 1 456666667766665 78999999
Q ss_pred HHHHhccCCCC-----------------h-hHHHhcCcHHHHHHhccCC-------c-chHHHHHHHHHHhhCChhcHHH
Q 014196 221 ALYNLSAVLDN-----------------A-RPMVSNGVVHTLLKLCSMK-------E-RLSEKSLATLGNLVVTSTGKKA 274 (429)
Q Consensus 221 aL~nLs~~~~n-----------------~-~~iv~~G~v~~Lv~lL~~~-------~-~~~~~a~~~L~~La~~~e~~~~ 274 (429)
.+..++..... . ...+ ..++|.++..|.+. + .++..+..+|..++..-. ..
T Consensus 289 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~il~~ll~~l~~~~~d~~d~~~~~r~~a~~~L~~l~~~~~--~~ 365 (861)
T 2bpt_A 289 FWSTICEEEIDIAYELAQFPQSPLQSYNFALSSI-KDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCG--NH 365 (861)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCSCCCCCHHHHHH-HHHHHHHHHHTTCCCCC-CCCCCHHHHHHHHHHHHHHHHHG--GG
T ss_pred HHHHHHHHHHhhhhhhhhccCCchhhHHHHHHHH-HHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHHHHcc--Hh
Confidence 99888764210 1 1111 45778888888642 1 466778888888876311 11
Q ss_pred HhcCCCChHHHHHhcccCCChhHHHHHHHHHHHHhhCC-HHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHhc
Q 014196 275 MEDSPLVPESLIEILTWEEKPKCQELSAYILMILAHQS-SEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKDE 353 (429)
Q Consensus 275 i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~~~-~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~~ 353 (429)
+.. .+.+.+.+.+. +.+...++.|+.+|..++.+. ++.....+. .+++.|+..+.+.++.++..|+|+|..+.+.
T Consensus 366 ~~~--~l~~~l~~~l~-~~~~~~r~~a~~~l~~i~~~~~~~~~~~~l~-~il~~l~~~l~d~~~~vr~~a~~~l~~l~~~ 441 (861)
T 2bpt_A 366 ILE--PVLEFVEQNIT-ADNWRNREAAVMAFGSIMDGPDKVQRTYYVH-QALPSILNLMNDQSLQVKETTAWCIGRIADS 441 (861)
T ss_dssp GHH--HHHHHHHHHTT-CSSHHHHHHHHHHHHHTSSSSCHHHHHHHHH-HHHHHHHHGGGCSCHHHHHHHHHHHHHHHHH
T ss_pred HHH--HHHHHHHHHcC-CCChhHHHHHHHHHHHHHcCCCHHHHHHHHH-HHHHHHHHHcCCCcHHHHHHHHHHHHHHHHH
Confidence 111 12345666776 677889999999999998753 232222222 4788899988888999999999998888764
No 70
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=98.23 E-value=4.8e-06 Score=76.67 Aligned_cols=180 Identities=13% Similarity=0.141 Sum_probs=131.3
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHHHhhhchHHH-HHHHhcCcHHHHHHhhc-CCCHHHHHHHHHHHHHhccCCCch-HHHH
Q 014196 76 KSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIK-KLMAELGVIQMLVSMVS-TEVIGRRRAAIKALIQLANGTYTN-KAIM 152 (429)
Q Consensus 76 ~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r-~~i~~~G~i~~Lv~lL~-s~~~~~~~~A~~aL~nLa~~~~~n-k~~i 152 (429)
.+.+.+.+.++..|..|+..|..+....+..- ..+ ...++.|...|. +.+..++..|+.+|..|+..-... ...+
T Consensus 19 ~l~~~l~s~~w~~R~~a~~~L~~l~~~~~~~~~~~~--~~i~~~L~~~l~kd~~~~V~~~a~~~l~~la~~l~~~~~~~~ 96 (242)
T 2qk2_A 19 DFYDKLEEKKWTLRKESLEVLEKLLTDHPKLENGEY--GALVSALKKVITKDSNVVLVAMAGKCLALLAKGLAKRFSNYA 96 (242)
T ss_dssp THHHHHTCSSHHHHHHHHHHHHHHHHHCSSBCCCCC--HHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHGGGGHHHH
T ss_pred HHHhhhccCCHHHHHHHHHHHHHHHccCCCCCCCCH--HHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 36777888899999999999999987532210 001 134777888884 889999999999999998543111 1111
Q ss_pred HhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhc-cCCCC
Q 014196 153 VEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLS-AVLDN 231 (429)
Q Consensus 153 v~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs-~~~~n 231 (429)
...+|.|...+...+..+|+.+..+|.++...... ...+|.|...|.+.++ .+|..++..|..+. .+...
T Consensus 97 --~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~~~------~~ll~~l~~~l~~~~~-~vr~~~l~~l~~~l~~~~~~ 167 (242)
T 2qk2_A 97 --SACVPSLLEKFKEKKPNVVTALREAIDAIYASTSL------EAQQESIVESLSNKNP-SVKSETALFIARALTRTQPT 167 (242)
T ss_dssp --HHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTSCH------HHHHHHHHHHTTCSCH-HHHHHHHHHHHHHHTTCCGG
T ss_pred --HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCH------HHHHHHHHHHHcCCCh-HHHHHHHHHHHHHHHHcCCC
Confidence 23678888888888888999999999998754321 2357888899988876 89999999999954 43211
Q ss_pred --hhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhC
Q 014196 232 --ARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVV 267 (429)
Q Consensus 232 --~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~ 267 (429)
-...+ ...+|.|+.+|.|.. +++..|..+|..++.
T Consensus 168 ~~~~~~l-~~l~p~l~~~l~D~~~~VR~~A~~~l~~l~~ 205 (242)
T 2qk2_A 168 ALNKKLL-KLLTTSLVKTLNEPDPTVRDSSAEALGTLIK 205 (242)
T ss_dssp GCCHHHH-HHHHHHHHHHHTSSCHHHHHHHHHHHHHHHH
T ss_pred CccHHHH-HHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Confidence 12222 267899999998876 889999999988775
No 71
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=98.19 E-value=0.00021 Score=75.14 Aligned_cols=279 Identities=11% Similarity=0.028 Sum_probs=171.3
Q ss_pred cchhhHHHHHHHHHhhcccccCCCCCCCChhhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHH
Q 014196 39 KSRTLKNINCQEEKQVIIEEKNHEQSDIEEDDCVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQM 118 (429)
Q Consensus 39 PN~~Lr~lI~~W~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~ 118 (429)
+|..+|++..-...... .. ..+...-.+..+.+.|.++|+..+-.|+..|.++.. ++.-. ..++.
T Consensus 86 ~~~~~Krl~YL~l~~~~-----~~---~~e~~~L~iN~l~kDl~~~n~~ir~lALr~L~~i~~--~e~~~-----~l~~~ 150 (621)
T 2vgl_A 86 NRYTEKQIGYLFISVLV-----NS---NSELIRLINNAIKNDLASRNPTFMGLALHCIANVGS--REMAE-----AFAGE 150 (621)
T ss_dssp SCHHHHHHHHHHHHHSC-----CC---CHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHCC--HHHHH-----HHTTH
T ss_pred CCHHHHHHHHHHHHHHc-----cC---CcHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhccCC--HHHHH-----HHHHH
Confidence 77778887777665441 00 011123346778888999999999889998888853 33322 24788
Q ss_pred HHHhh--cCCCHHHHHHHHHHHHHhccCCCchHHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccccccC
Q 014196 119 LVSMV--STEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPLSSS 196 (429)
Q Consensus 119 Lv~lL--~s~~~~~~~~A~~aL~nLa~~~~~nk~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~ 196 (429)
+..+| .+.++-++..|+.++.++...++ ..+-..+.++.+..+|...++.++..|+.+|..++..+.. . -.
T Consensus 151 v~~~l~~~d~~~~VRK~A~~al~kl~~~~p---~~~~~~~~~~~l~~lL~d~d~~V~~~a~~~l~~i~~~~~~--~--~~ 223 (621)
T 2vgl_A 151 IPKILVAGDTMDSVKQSAALCLLRLYRTSP---DLVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPE--E--FK 223 (621)
T ss_dssp HHHHHHCSSSCHHHHHHHHHHHHHHHHHCG---GGCCCCSCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCHH--H--HT
T ss_pred HHHHHhCCCCCHHHHHHHHHHHHHHHHhCh---hhcCchhHHHHHHHHhCCCCccHHHHHHHHHHHHHHhChH--H--HH
Confidence 89999 88899999999999999987653 2222247888999999888888888888899998854321 1 12
Q ss_pred CcHHHHHHhhh----cC-------------CcHHHHHHHHHHHHHhccCCC--ChhHHHhcCcHHHHHHhccCC------
Q 014196 197 EILPFLVGILE----SG-------------SSVETKELCIGALYNLSAVLD--NARPMVSNGVVHTLLKLCSMK------ 251 (429)
Q Consensus 197 g~i~~Lv~lL~----~~-------------~~~~~~~~A~~aL~nLs~~~~--n~~~iv~~G~v~~Lv~lL~~~------ 251 (429)
..+|.+++.|. .+ ++ =++...+..|..++..++ ....+.+ .++.++..+.+.
T Consensus 224 ~~~~~~~~~L~~ll~~~~~~~~~~~~~~~~~~-w~qi~il~ll~~~~~~~d~~~~~~l~~--~L~~il~~~~~~~ks~~l 300 (621)
T 2vgl_A 224 TSVSLAVSRLSRIVTSASTDLQDYTYYFVPAP-WLSVKLLRLLQCYPPPEDPAVRGRLTE--CLETILNKAQEPPKSKKV 300 (621)
T ss_dssp THHHHHHHHHHHHHHCCSSSCSTTEETTEESH-HHHHHHHHHGGGSSSCSSHHHHHHHHH--HHHHHHHHHHSCCSCSSH
T ss_pred HHHHHHHHHHHHHHhCCCCCccchhhcCCCCc-hHHHHHHHHHHHhCCCCCHHHHHHHHH--HHHHHHHhhccCcccccc
Confidence 34566665443 22 23 366667777777764321 1222222 333344322111
Q ss_pred -----c-chHHHHHHHHHHhhCChhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHHHhhCCHHHHHHHHhCCch
Q 014196 252 -----E-RLSEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIV 325 (429)
Q Consensus 252 -----~-~~~~~a~~~L~~La~~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~~~~~~~~~i~~~G~v 325 (429)
. .+.-.|+.++..+...++.....+ ..|..+|. +.++..+-.|+..|..++...+. .. ++. ...
T Consensus 301 ~~~n~~~aVl~ea~~~i~~l~~~~~~~~~~~------~~L~~~L~-~~~~niry~aL~~l~~l~~~~~~-~~-~~~-~~~ 370 (621)
T 2vgl_A 301 QHSNAKNAVLFEAISLIIHHDSEPNLLVRAC------NQLGQFLQ-HRETNLRYLALESMCTLASSEFS-HE-AVK-THI 370 (621)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH------HHHHHHSS-CSCHHHHHHHHHHHHHHTTCTTT-HH-HHH-TTH
T ss_pred cccchHHHHHHHHHHHHHhcCCcHHHHHHHH------HHHHHHhc-CCCcchHHHHHHHHHHHHhccCc-HH-HHH-HHH
Confidence 1 455555666666554443333222 25777776 56777777777777777764321 11 222 245
Q ss_pred HHHHHHhh-cCCHHHHHHHHHHHHHHHh
Q 014196 326 HVSLQLAL-LGSPLAQRRASKLLQWFKD 352 (429)
Q Consensus 326 ~~L~~ll~-~~~~~~k~~A~~lL~~l~~ 352 (429)
+.++.++. +.+..++.+|..+|..+..
T Consensus 371 ~~i~~~L~~d~d~~Ir~~aL~lL~~l~~ 398 (621)
T 2vgl_A 371 ETVINALKTERDVSVRQRAVDLLYAMCD 398 (621)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhccCCCHhHHHHHHHHHHHHcC
Confidence 66666666 6666777777776655554
No 72
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.14 E-value=6.9e-07 Score=70.11 Aligned_cols=54 Identities=13% Similarity=0.129 Sum_probs=44.6
Q ss_pred CCCCcchhhhhhhhHH--HHHHHHhcc------c--cccCC---CCCCCcccchhhHHHHHHHHHhh
Q 014196 1 MSIPSSSYMRLQFFSR--IRQFIQSKS------A--RRRQN---EPNHNHEKSRTLKNINCQEEKQV 54 (429)
Q Consensus 1 ~~~~~~~~~~~~TydR--Ie~W~~~g~------~--~T~~~---L~~~~L~PN~~Lr~lI~~W~~~~ 54 (429)
|..|++.-.=|+||+| |++|+..++ . +|+++ +...+|+||..|+++|+.|+..+
T Consensus 17 ~~dPV~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~~l~~~~L~pn~~L~~~I~~~~~~~ 83 (94)
T 2yu4_A 17 MKKPVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHTDIRKSDLIQDEALRRAIENHNKKR 83 (94)
T ss_dssp CSSEEEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCCCBCGGGEEECHHHHHHHHHHHTTC
T ss_pred hcCCEEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCcccccCHhhCcCCHHHHHHHHHHHHHh
Confidence 5567765335899999 999998752 2 88887 88889999999999999999876
No 73
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=98.10 E-value=2.3e-07 Score=77.29 Aligned_cols=121 Identities=12% Similarity=0.074 Sum_probs=88.4
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHH
Q 014196 71 CVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKA 150 (429)
Q Consensus 71 ~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~ 150 (429)
...++.++..|.++++..+..|+..|..+.. ..++.|+.+|.++++.++..|+++|.++..
T Consensus 11 ~~~~~~l~~~L~~~~~~vR~~A~~~L~~~~~------------~~~~~L~~~L~d~~~~vR~~A~~aL~~~~~------- 71 (131)
T 1te4_A 11 SSGLVPRGSHMADENKWVRRDVSTALSRMGD------------EAFEPLLESLSNEDWRIRGAAAWIIGNFQD------- 71 (131)
T ss_dssp ----------CCSSCCCSSSSCCSSTTSCSS------------TTHHHHHHGGGCSCHHHHHHHHHHHGGGCS-------
T ss_pred cccHHHHHHHhcCCCHHHHHHHHHHHHHhCc------------hHHHHHHHHHcCCCHHHHHHHHHHHHhcCC-------
Confidence 3447788889988888888888777765532 126899999999999999999999988752
Q ss_pred HHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHh
Q 014196 151 IMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNL 225 (429)
Q Consensus 151 ~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nL 225 (429)
..+++.|..++.+.+..+|..++.+|..+. +..+++.|+.++.+.+. .++..|+.+|.++
T Consensus 72 ----~~a~~~L~~~L~d~~~~VR~~A~~aL~~~~----------~~~a~~~L~~~l~d~~~-~vr~~A~~aL~~i 131 (131)
T 1te4_A 72 ----ERAVEPLIKLLEDDSGFVRSGAARSLEQIG----------GERVRAAMEKLAETGTG-FARKVAVNYLETH 131 (131)
T ss_dssp ----HHHHHHHHHHHHHCCTHHHHHHHHHHHHHC----------SHHHHHHHHHHTTSCCT-HHHHHHHHHGGGC
T ss_pred ----HHHHHHHHHHHcCCCHHHHHHHHHHHHHhC----------cHHHHHHHHHHHhCCCH-HHHHHHHHHHHhC
Confidence 124777888888888889999999988875 23468999999988776 7898888888653
No 74
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=98.10 E-value=3.7e-05 Score=70.60 Aligned_cols=181 Identities=12% Similarity=0.093 Sum_probs=128.7
Q ss_pred hhhhhccCCCHHHHHHHHHHHHHhhcc-CCCccccccCCcHHHHHHhhh-cCCcHHHHHHHHHHHHHhccCCCChhHHHh
Q 014196 160 KLPKNVDAVDESTRHEFGELLLSLSSL-ANTHIPLSSSEILPFLVGILE-SGSSVETKELCIGALYNLSAVLDNARPMVS 237 (429)
Q Consensus 160 ~Lv~lL~~~~~~~~~~aa~~L~~Ls~~-~~~~~~i~~~g~i~~Lv~lL~-~~~~~~~~~~A~~aL~nLs~~~~n~~~iv~ 237 (429)
.+...+++.+...|..++..|..+... ++....- -...++.|...+. +.+. .++..|+.+|..|+..-...-.-.-
T Consensus 19 ~l~~~l~s~~w~~R~~a~~~L~~l~~~~~~~~~~~-~~~i~~~L~~~l~kd~~~-~V~~~a~~~l~~la~~l~~~~~~~~ 96 (242)
T 2qk2_A 19 DFYDKLEEKKWTLRKESLEVLEKLLTDHPKLENGE-YGALVSALKKVITKDSNV-VLVAMAGKCLALLAKGLAKRFSNYA 96 (242)
T ss_dssp THHHHHTCSSHHHHHHHHHHHHHHHHHCSSBCCCC-CHHHHHHHHHHHHHCSCH-HHHHHHHHHHHHHHHHHGGGGHHHH
T ss_pred HHHhhhccCCHHHHHHHHHHHHHHHccCCCCCCCC-HHHHHHHHHHHhccCCCH-HHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 356677778888899998888888754 2211100 1246788888885 6666 7899999999999964222111112
Q ss_pred cCcHHHHHHhccCCc-chHHHHHHHHHHhhCChhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHHHhh-CCHH-
Q 014196 238 NGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMILAH-QSSE- 314 (429)
Q Consensus 238 ~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~-~~~~- 314 (429)
...+|.|+..+.|.. .+++.+..+|.+++..... . .+.+.|...+. +.++..++.++..|..+.. .+++
T Consensus 97 ~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~~~-~------~ll~~l~~~l~-~~~~~vr~~~l~~l~~~l~~~~~~~ 168 (242)
T 2qk2_A 97 SACVPSLLEKFKEKKPNVVTALREAIDAIYASTSL-E------AQQESIVESLS-NKNPSVKSETALFIARALTRTQPTA 168 (242)
T ss_dssp HHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTSCH-H------HHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCH-H------HHHHHHHHHHc-CCChHHHHHHHHHHHHHHHHcCCCC
Confidence 357899999999876 8889999999998874321 1 13346788888 7889999999999998543 3332
Q ss_pred -HHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHh
Q 014196 315 -QRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKD 352 (429)
Q Consensus 315 -~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~ 352 (429)
....+- .++|.|+.++.+..+.+|..|...+..+..
T Consensus 169 ~~~~~l~--~l~p~l~~~l~D~~~~VR~~A~~~l~~l~~ 205 (242)
T 2qk2_A 169 LNKKLLK--LLTTSLVKTLNEPDPTVRDSSAEALGTLIK 205 (242)
T ss_dssp CCHHHHH--HHHHHHHHHHTSSCHHHHHHHHHHHHHHHH
T ss_pred ccHHHHH--HHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Confidence 122222 478999999999999999999998877775
No 75
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=98.05 E-value=6.5e-07 Score=74.48 Aligned_cols=119 Identities=15% Similarity=0.095 Sum_probs=87.2
Q ss_pred cCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccc
Q 014196 113 LGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIP 192 (429)
Q Consensus 113 ~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~ 192 (429)
.+.++.|+.+|+++++.++..|+++|.++... .++.|+.++.+.+..+|..++.+|..+..
T Consensus 11 ~~~~~~l~~~L~~~~~~vR~~A~~~L~~~~~~------------~~~~L~~~L~d~~~~vR~~A~~aL~~~~~------- 71 (131)
T 1te4_A 11 SSGLVPRGSHMADENKWVRRDVSTALSRMGDE------------AFEPLLESLSNEDWRIRGAAAWIIGNFQD------- 71 (131)
T ss_dssp ----------CCSSCCCSSSSCCSSTTSCSST------------THHHHHHGGGCSCHHHHHHHHHHHGGGCS-------
T ss_pred cccHHHHHHHhcCCCHHHHHHHHHHHHHhCch------------HHHHHHHHHcCCCHHHHHHHHHHHHhcCC-------
Confidence 45688899999999999999999888765311 25778889998889999999888887652
Q ss_pred cccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCCCChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHH
Q 014196 193 LSSSEILPFLVGILESGSSVETKELCIGALYNLSAVLDNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGN 264 (429)
Q Consensus 193 i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~ 264 (429)
..+++.|+.+|.+.+. .++..|+.+|.++. +.++++.|+.++.+.+ .++..|+.+|..
T Consensus 72 ---~~a~~~L~~~L~d~~~-~VR~~A~~aL~~~~----------~~~a~~~L~~~l~d~~~~vr~~A~~aL~~ 130 (131)
T 1te4_A 72 ---ERAVEPLIKLLEDDSG-FVRSGAARSLEQIG----------GERVRAAMEKLAETGTGFARKVAVNYLET 130 (131)
T ss_dssp ---HHHHHHHHHHHHHCCT-HHHHHHHHHHHHHC----------SHHHHHHHHHHTTSCCTHHHHHHHHHGGG
T ss_pred ---HHHHHHHHHHHcCCCH-HHHHHHHHHHHHhC----------cHHHHHHHHHHHhCCCHHHHHHHHHHHHh
Confidence 3468999999998887 79999999999886 2357899999998776 677777776653
No 76
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=98.04 E-value=6.1e-07 Score=64.33 Aligned_cols=43 Identities=9% Similarity=0.064 Sum_probs=34.7
Q ss_pred CCCCcchhhhhhhhHH--HHHHHHhcc-c-cccCCCCCCCcccchhh
Q 014196 1 MSIPSSSYMRLQFFSR--IRQFIQSKS-A-RRRQNEPNHNHEKSRTL 43 (429)
Q Consensus 1 ~~~~~~~~~~~~TydR--Ie~W~~~g~-~-~T~~~L~~~~L~PN~~L 43 (429)
|..|+..---|+|||| |++||.++. + +|+++|...+|+||++-
T Consensus 13 m~dPV~~~~sG~~yer~~I~~~l~~~~~cP~t~~~L~~~~Lip~~~~ 59 (61)
T 2bay_A 13 PRRPVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIEEIVEIVPS 59 (61)
T ss_dssp CSSEEEETTTTEEEEHHHHHHHHHHHSBCTTTCCBCCGGGCEECCCC
T ss_pred CCCCEEeCCCCcEEcHHHHHHHHHhCCCCcCCcCCCChhhcEECccC
Confidence 4556665345899999 999997654 3 99999999999999874
No 77
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=97.99 E-value=2e-05 Score=73.18 Aligned_cols=188 Identities=10% Similarity=0.148 Sum_probs=129.2
Q ss_pred HHHHhcCCCHHHHHHHHHHHHH-HhhhchHHHHHHHh-cCcHHHHHHhh-cCCCHHHHHHHHHHHHHhccCCC--chH-H
Q 014196 77 SVKRLHFGSWEEKEMAAKEIEK-LAKEDVKIKKLMAE-LGVIQMLVSMV-STEVIGRRRAAIKALIQLANGTY--TNK-A 150 (429)
Q Consensus 77 lv~~L~~~~~~~~~~Aa~~L~~-La~~~~~~r~~i~~-~G~i~~Lv~lL-~s~~~~~~~~A~~aL~nLa~~~~--~nk-~ 150 (429)
+-..+.+.++..|++|+..|.. +....++....-.+ ...+..|...+ ++.+..++..|+.+|..|+.+-. .-. .
T Consensus 21 f~~~l~s~~w~eRk~al~~L~~~~~~~~~~i~~~~~~~~~~~~~L~~~l~~D~n~~v~~~A~~al~~la~~l~~~~f~~~ 100 (249)
T 2qk1_A 21 FQERITSSKWKDRVEALEEFWDSVLSQTKKLKSTSQNYSNLLGIYGHIIQKDANIQAVALAAQSVELICDKLKTPGFSKD 100 (249)
T ss_dssp HHHHHTCSSHHHHHHHHHHHHHHTGGGCCCBCCTTCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHCTTTSCHH
T ss_pred HHHHhhcCCHHHHHHHHHHHHHHHHhcCCccccCcccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhcccccccHH
Confidence 4456788899999999999999 87543221100011 13467788888 68899999999999999985321 111 2
Q ss_pred HHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccccc-cCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCC
Q 014196 151 IMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPLS-SSEILPFLVGILESGSSVETKELCIGALYNLSAVL 229 (429)
Q Consensus 151 ~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~-~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~ 229 (429)
... -.+|.++..+......++..+..+|..+...-+.-.... -...++.|...|.+.+. .+|..++.+|..+....
T Consensus 101 y~~--~llp~ll~~l~dkk~~V~~aa~~al~~i~~~~~~~~~~~~l~~ll~~l~~~l~~k~~-~vk~~al~~l~~~~~~~ 177 (249)
T 2qk1_A 101 YVS--LVFTPLLDRTKEKKPSVIEAIRKALLTICKYYDPLASSGRNEDMLKDILEHMKHKTP-QIRMECTQLFNASMKEE 177 (249)
T ss_dssp HHH--HHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHSCTTCTTCTTHHHHHHHHHHTTCSSH-HHHHHHHHHHHHHHHHC
T ss_pred HHH--HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHccccccCCcHHHHHHHHHHHHcCCCh-HHHHHHHHHHHHHHHHc
Confidence 222 257778888887778888877778887775321100000 11367888889988876 89999999999888644
Q ss_pred CCh-h---HHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhC
Q 014196 230 DNA-R---PMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVV 267 (429)
Q Consensus 230 ~n~-~---~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~ 267 (429)
... . ..+....+|.|..++.|.+ ++++.|..+|..++.
T Consensus 178 ~~~~~~l~~~l~~~iip~l~~~l~D~~~~VR~aA~~~l~~i~~ 220 (249)
T 2qk1_A 178 KDGYSTLQRYLKDEVVPIVIQIVNDTQPAIRTIGFESFAILIK 220 (249)
T ss_dssp CSCSHHHHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHH
T ss_pred CCcchhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 321 1 2223578999999999876 889999888888764
No 78
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=97.94 E-value=0.00021 Score=80.90 Aligned_cols=228 Identities=14% Similarity=0.091 Sum_probs=156.1
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchH
Q 014196 70 DCVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNK 149 (429)
Q Consensus 70 ~~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk 149 (429)
....++.+++.|.+.++.+|..|+..|..++..-+. ..+ ..+++.|+..|.++++.+|..|+.+|..++.......
T Consensus 46 ~~~il~~Ll~~L~d~~~~vR~~A~~~L~~l~~~~~~--~~~--~~i~~~Ll~~l~d~~~~vR~~a~~~L~~i~~~l~~~~ 121 (1230)
T 1u6g_C 46 ERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKE--YQV--ETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPAS 121 (1230)
T ss_dssp HHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTSCH--HHH--HHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhCCH--HHH--HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCCcc
Confidence 456788899999988999999999999999864433 111 2347888899988888999999999998875532110
Q ss_pred -----HHHHhcCccchhhhhcc-CCCHHHHHHHHHHHHHhhccCCCccccc--cCCcHHHHHHhhhcCCcHHHHHHHHHH
Q 014196 150 -----AIMVEAGILTKLPKNVD-AVDESTRHEFGELLLSLSSLANTHIPLS--SSEILPFLVGILESGSSVETKELCIGA 221 (429)
Q Consensus 150 -----~~iv~~G~i~~Lv~lL~-~~~~~~~~~aa~~L~~Ls~~~~~~~~i~--~~g~i~~Lv~lL~~~~~~~~~~~A~~a 221 (429)
..-.-...+|.|...+. +.+...+..+..+|..++..... .+. -...++.|...|.+.+. .++..|+.+
T Consensus 122 ~~~~~~~~~~~~llp~L~~~l~~~~~~~~~~~al~~l~~~~~~~~~--~l~~~~~~ll~~l~~~L~~~~~-~vR~~a~~a 198 (1230)
T 1u6g_C 122 SGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGG--LLVNFHPSILTCLLPQLTSPRL-AVRKRTIIA 198 (1230)
T ss_dssp --CCTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHTCS--SCTTTHHHHHHHHGGGGGCSSH-HHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhHh--HHHHHHHHHHHHHHHHHcCCcH-HHHHHHHHH
Confidence 11112356788888887 46678888888888888743211 111 13456777777877776 799999999
Q ss_pred HHHhccCCCChhHHHhcCcHHHHHHhccCC-c-chHHHHHHHHHHhhCC-hhcHHHHh-cCCCChHHHHHhcccCCChhH
Q 014196 222 LYNLSAVLDNARPMVSNGVVHTLLKLCSMK-E-RLSEKSLATLGNLVVT-STGKKAME-DSPLVPESLIEILTWEEKPKC 297 (429)
Q Consensus 222 L~nLs~~~~n~~~iv~~G~v~~Lv~lL~~~-~-~~~~~a~~~L~~La~~-~e~~~~i~-~~~~i~~~Lv~~L~~~~s~~~ 297 (429)
|..++....+. + -...++.++..|.+. + ..+..++.++..++.. +. .+. -...+.+.+++.+. +.++..
T Consensus 199 l~~l~~~~~~~--~-~~~~l~~l~~~L~~~~~~~~r~~a~~~l~~l~~~~~~---~~~~~l~~l~~~ll~~l~-d~~~~v 271 (1230)
T 1u6g_C 199 LGHLVMSCGNI--V-FVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQAGH---RIGEYLEKIIPLVVKFCN-VDDDEL 271 (1230)
T ss_dssp HHHHTTTC-------CTTHHHHHHHHHHHTCSSCSCTTHHHHHHHHHHHSSG---GGTTSCTTHHHHHHHHHS-SCCTTT
T ss_pred HHHHHHhcCHH--H-HHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHhHH---HHHHHHHHHHHHHHHHhc-CCCHHH
Confidence 99998754332 1 234688888877643 2 5566677777777652 21 121 12345567888887 677888
Q ss_pred HHHHHHHHHHHhhC
Q 014196 298 QELSAYILMILAHQ 311 (429)
Q Consensus 298 ~e~A~~~L~~L~~~ 311 (429)
++.+..++..++..
T Consensus 272 R~~a~~~l~~l~~~ 285 (1230)
T 1u6g_C 272 REYCIQAFESFVRR 285 (1230)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999888764
No 79
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=97.91 E-value=4e-06 Score=63.08 Aligned_cols=53 Identities=11% Similarity=0.072 Sum_probs=44.3
Q ss_pred CCCcchhhhhhhhHH--HHHHHHhccc---cccCCCCCCCcccchhhHHHHHHHHHhhc
Q 014196 2 SIPSSSYMRLQFFSR--IRQFIQSKSA---RRRQNEPNHNHEKSRTLKNINCQEEKQVI 55 (429)
Q Consensus 2 ~~~~~~~~~~~TydR--Ie~W~~~g~~---~T~~~L~~~~L~PN~~Lr~lI~~W~~~~~ 55 (429)
..|+.. -=|+||.| |++|++.|+. .+++++....++||+.|+++|+.|..++.
T Consensus 19 ~~Pv~~-~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~~~~l~~n~~l~~~i~~~~~~~~ 76 (78)
T 1t1h_A 19 KDPVIV-STGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLKSLIALWCESNG 76 (78)
T ss_dssp SSEEEE-TTTEEEEHHHHHHHHTTTCCBCTTTCCBCSSCCCEECTTTHHHHHHHHHHSC
T ss_pred cCCEEc-CCCCeecHHHHHHHHHHCcCCCCCCcCCCChhhCccCHHHHHHHHHHHHHcC
Confidence 345543 35899999 9999987543 89999988899999999999999999883
No 80
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=97.83 E-value=4.4e-06 Score=78.76 Aligned_cols=53 Identities=13% Similarity=0.054 Sum_probs=45.7
Q ss_pred CCCCcchhhhhhhhHH--HHHHHHhc-c-c-cccCCCCCCCcccchhhHHHHHHHHHhh
Q 014196 1 MSIPSSSYMRLQFFSR--IRQFIQSK-S-A-RRRQNEPNHNHEKSRTLKNINCQEEKQV 54 (429)
Q Consensus 1 ~~~~~~~~~~~~TydR--Ie~W~~~g-~-~-~T~~~L~~~~L~PN~~Lr~lI~~W~~~~ 54 (429)
|..|++.- -|+||+| |++|+..+ . + +|++++....|+||++||++|+.|+..+
T Consensus 218 ~~dPv~~~-~gh~f~~~~i~~~~~~~~~~cP~~~~~~~~~~l~~n~~l~~~i~~~~~~~ 275 (281)
T 2c2l_A 218 MREPCITP-SGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQLIPNLAMKEVIDAFISEN 275 (281)
T ss_dssp CSSEEECS-SCCEEETTHHHHHHHHTCSSCTTTCCCCCGGGCEECHHHHHHHHHHHTTC
T ss_pred hcCCeECC-CCCEECHHHHHHHHHHCCCCCcCCCCCCchhcCcccHHHHHHHHHHHHHC
Confidence 45677655 4899999 99999875 3 3 9999999889999999999999999887
No 81
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=97.71 E-value=0.0024 Score=67.00 Aligned_cols=249 Identities=12% Similarity=0.088 Sum_probs=163.7
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhc-CCCHHHHHHHHHHHHHhccCCCchHH
Q 014196 72 VLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVS-TEVIGRRRAAIKALIQLANGTYTNKA 150 (429)
Q Consensus 72 ~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~-s~~~~~~~~A~~aL~nLa~~~~~nk~ 150 (429)
..+..|...|.+.+++.|.-|+..|..++...+. ...+. ...+.++.+|. ++|..++..++..|..++.. .|-.
T Consensus 329 ~~~~~L~~~L~~~~~niry~aL~~l~~l~~~~~~-~~~~~--~~~~~i~~~L~~d~d~~Ir~~aL~lL~~l~~~--~Nv~ 403 (621)
T 2vgl_A 329 RACNQLGQFLQHRETNLRYLALESMCTLASSEFS-HEAVK--THIETVINALKTERDVSVRQRAVDLLYAMCDR--SNAQ 403 (621)
T ss_dssp HHHHHHHHHSSCSCHHHHHHHHHHHHHHTTCTTT-HHHHH--TTHHHHHHHHTTCCCHHHHHHHHHHHHHHCCH--HHHH
T ss_pred HHHHHHHHHhcCCCcchHHHHHHHHHHHHhccCc-HHHHH--HHHHHHHHHhccCCCHhHHHHHHHHHHHHcCh--hhHH
Confidence 3466777777777889999999999999876542 12332 34778889999 89999999999999999854 4766
Q ss_pred HHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhcc-CC
Q 014196 151 IMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSA-VL 229 (429)
Q Consensus 151 ~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~-~~ 229 (429)
.|++ .|...+...+.+.+..++..+..++..-.. ...-.+..|++++..+.. .+...++..+.++.. .+
T Consensus 404 ~Iv~-----eL~~yl~~~d~~~~~~~v~~I~~la~k~~~----~~~~~v~~Ll~ll~~~~~-~v~~ev~~~l~~ii~~~~ 473 (621)
T 2vgl_A 404 QIVA-----EMLSYLETADYSIREEIVLKVAILAEKYAV----DYTWYVDTILNLIRIAGD-YVSEEVWYRVIQIVINRD 473 (621)
T ss_dssp HHHH-----HHHHHHHHCCHHHHHHHHHHHHHHHHHHCS----STHHHHHHHHHHHHHHGG-GSCSHHHHHHHHHHGGGC
T ss_pred HHHH-----HHHHHHHhcCHHHHHHHHHHHHHHHHhcCC----cHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHhCCh
Confidence 6654 356666667888888888888888742111 012357889998886433 234446666666654 34
Q ss_pred CChhHHHhcCcHHHHHHhccCCc---chHHHHHHHHHHhhCChhcHHHHhcCCCC-h----HHHHHhcccCCChhHHHHH
Q 014196 230 DNARPMVSNGVVHTLLKLCSMKE---RLSEKSLATLGNLVVTSTGKKAMEDSPLV-P----ESLIEILTWEEKPKCQELS 301 (429)
Q Consensus 230 ~n~~~iv~~G~v~~Lv~lL~~~~---~~~~~a~~~L~~La~~~e~~~~i~~~~~i-~----~~Lv~~L~~~~s~~~~e~A 301 (429)
+-+.. ++..|++.+.++. .+...++.+|++-+. .+.+.+++ | ..+.+-+. ..++.++...
T Consensus 474 ~~~~~-----~~~~l~~~l~~~~~~~~li~~~~wilGEy~~------~~~~~~~~~p~~~l~~l~~~~~-~~~~~v~~~~ 541 (621)
T 2vgl_A 474 DVQGY-----AAKTVFEALQAPACHENLVKVGGYILGEFGN------LIAGDPRSSPLIQFNLLHSKFH-LCSVPTRALL 541 (621)
T ss_dssp SCHHH-----HHHHHHHHHTSSSCCHHHHHHHHHHHHHHTH------HHHSSTTSCHHHHHHHHHHHHT-TSCHHHHHHH
T ss_pred hHHHH-----HHHHHHHHHcCccchHHHHHHHHHHhcchHH------HhcccCCCCHHHHHHHHHHHhc-cCCHHHHHHH
Confidence 43333 3567788887763 556667788877543 22222222 1 12333333 4677888888
Q ss_pred HHHHHHHhhCCHHHHHHHHhCCchHHHHH-Hhh--cCCHHHHHHHHHHHHHHHhc
Q 014196 302 AYILMILAHQSSEQRDKMAKSGIVHVSLQ-LAL--LGSPLAQRRASKLLQWFKDE 353 (429)
Q Consensus 302 ~~~L~~L~~~~~~~~~~i~~~G~v~~L~~-ll~--~~~~~~k~~A~~lL~~l~~~ 353 (429)
+.++..+....++..+. +..++. ... +.++++|++|...++.++..
T Consensus 542 Lta~~Kl~~~~p~~~~~------i~~~l~~~~~~~~~d~evrdRA~~y~~Ll~~~ 590 (621)
T 2vgl_A 542 LSTYIKFVNLFPEVKAT------IQDVLRSDSQLKNADVELQQRAVEYLRLSTVA 590 (621)
T ss_dssp HHHHHHHHHHCGGGHHH------HHHHHSSHHHHSCSSHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHChHHHHH------HHHHHHHHhcCCCCCHHHHHHHHHHHHHHccC
Confidence 88888887655543332 222332 233 56889999999999999854
No 82
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=97.68 E-value=0.00096 Score=61.70 Aligned_cols=185 Identities=13% Similarity=0.091 Sum_probs=123.6
Q ss_pred hhhccCCCHHHHHHHHHHHHH-hhccCCCcccc---cc-CCcHHHHHHhh-hcCCcHHHHHHHHHHHHHhccCCC--Chh
Q 014196 162 PKNVDAVDESTRHEFGELLLS-LSSLANTHIPL---SS-SEILPFLVGIL-ESGSSVETKELCIGALYNLSAVLD--NAR 233 (429)
Q Consensus 162 v~lL~~~~~~~~~~aa~~L~~-Ls~~~~~~~~i---~~-~g~i~~Lv~lL-~~~~~~~~~~~A~~aL~nLs~~~~--n~~ 233 (429)
...+++.+...|..+...|.. +... +...+ .+ ...+..|.+.+ .+.+. .++..|+.+|..|+..-. ...
T Consensus 22 ~~~l~s~~w~eRk~al~~L~~~~~~~--~~~i~~~~~~~~~~~~~L~~~l~~D~n~-~v~~~A~~al~~la~~l~~~~f~ 98 (249)
T 2qk1_A 22 QERITSSKWKDRVEALEEFWDSVLSQ--TKKLKSTSQNYSNLLGIYGHIIQKDANI-QAVALAAQSVELICDKLKTPGFS 98 (249)
T ss_dssp HHHHTCSSHHHHHHHHHHHHHHTGGG--CCCBCCTTCCCHHHHHHHHHHHHHCSCH-HHHHHHHHHHHHHHHHHCTTTSC
T ss_pred HHHhhcCCHHHHHHHHHHHHHHHHhc--CCccccCcccHHHHHHHHHHHhccCCCH-HHHHHHHHHHHHHHHhccccccc
Confidence 445677778888888888888 7632 11111 12 24577888888 45555 788899999999996322 222
Q ss_pred -HHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCChhcHHHHhc-CCCChHHHHHhcccCCChhHHHHHHHHHHHHhh
Q 014196 234 -PMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTSTGKKAMED-SPLVPESLIEILTWEEKPKCQELSAYILMILAH 310 (429)
Q Consensus 234 -~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~e~~~~i~~-~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~ 310 (429)
... .-++|.+++.+++.. .+++.+..+|..++.+-+- ..... -..+.+.|...|. +.++..++.++.+|..++.
T Consensus 99 ~~y~-~~llp~ll~~l~dkk~~V~~aa~~al~~i~~~~~~-~~~~~~l~~ll~~l~~~l~-~k~~~vk~~al~~l~~~~~ 175 (249)
T 2qk1_A 99 KDYV-SLVFTPLLDRTKEKKPSVIEAIRKALLTICKYYDP-LASSGRNEDMLKDILEHMK-HKTPQIRMECTQLFNASMK 175 (249)
T ss_dssp HHHH-HHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHSCT-TCTTCTTHHHHHHHHHHTT-CSSHHHHHHHHHHHHHHHH
T ss_pred HHHH-HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHccc-cccCCcHHHHHHHHHHHHc-CCChHHHHHHHHHHHHHHH
Confidence 111 237899999999875 7778888888877762110 00000 1123346777887 7789999999999998775
Q ss_pred CCH---HHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHh
Q 014196 311 QSS---EQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKD 352 (429)
Q Consensus 311 ~~~---~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~ 352 (429)
..+ ..-...+...++|.|..++.+..+.+|..|...|..+..
T Consensus 176 ~~~~~~~~l~~~l~~~iip~l~~~l~D~~~~VR~aA~~~l~~i~~ 220 (249)
T 2qk1_A 176 EEKDGYSTLQRYLKDEVVPIVIQIVNDTQPAIRTIGFESFAILIK 220 (249)
T ss_dssp HCCSCSHHHHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHH
T ss_pred HcCCcchhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 332 221122325689999999999999999999998777665
No 83
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=97.64 E-value=0.0045 Score=67.14 Aligned_cols=223 Identities=13% Similarity=0.031 Sum_probs=146.0
Q ss_pred HHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHHHHhcCccchhhhhc
Q 014196 86 WEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNV 165 (429)
Q Consensus 86 ~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~iv~~G~i~~Lv~lL 165 (429)
+..+..|+..|....-.+. +. .+++.|..+|.+++..+++.|+.+|+-+-.+. .|...+ ..|+..+
T Consensus 451 ~~ir~gAaLGLGla~~GS~--~e-----ev~e~L~~~L~dd~~~~~~~AalALGli~vGT-gn~~ai------~~LL~~~ 516 (963)
T 4ady_A 451 DVLLHGASLGIGLAAMGSA--NI-----EVYEALKEVLYNDSATSGEAAALGMGLCMLGT-GKPEAI------HDMFTYS 516 (963)
T ss_dssp HHHHHHHHHHHHHHSTTCC--CH-----HHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTC-CCHHHH------HHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCC--CH-----HHHHHHHHHHhcCCHHHHHHHHHHHhhhhccc-CCHHHH------HHHHHHH
Confidence 4455666666665432221 11 23677888998888777888888888776665 344333 2334433
Q ss_pred -cCCCHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCCCChhHHHhcCcHHHH
Q 014196 166 -DAVDESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVLDNARPMVSNGVVHTL 244 (429)
Q Consensus 166 -~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~n~~~iv~~G~v~~L 244 (429)
...+...++.++..|..+.. ++...++.+++.|.....+-++..++.++.--.....|.. +|+.|
T Consensus 517 ~e~~~e~vrR~aalgLGll~~--------g~~e~~~~li~~L~~~~dp~vRygaa~alglAyaGTGn~~------aIq~L 582 (963)
T 4ady_A 517 QETQHGNITRGLAVGLALINY--------GRQELADDLITKMLASDESLLRYGGAFTIALAYAGTGNNS------AVKRL 582 (963)
T ss_dssp HHCSCHHHHHHHHHHHHHHTT--------TCGGGGHHHHHHHHHCSCHHHHHHHHHHHHHHTTTSCCHH------HHHHH
T ss_pred hccCcHHHHHHHHHHHHhhhC--------CChHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcCCCCHH------HHHHH
Confidence 34456677777777776652 2234578999998865444567766666665455555543 46667
Q ss_pred HHhcc-CCc-chHHHHHHHHHHhhCChhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHHHhhCCHHHHHHHHhC
Q 014196 245 LKLCS-MKE-RLSEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKS 322 (429)
Q Consensus 245 v~lL~-~~~-~~~~~a~~~L~~La~~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~~~~~~~~~i~~~ 322 (429)
+..+. +.+ .+++.|+..|+.+....+ ..+ +.+++.|..+.++.+|..|+.+|+.+|.+++. .
T Consensus 583 L~~~~~d~~d~VRraAViaLGlI~~g~~--------e~v-~rlv~~L~~~~d~~VR~gAalALGli~aGn~~--~----- 646 (963)
T 4ady_A 583 LHVAVSDSNDDVRRAAVIALGFVLLRDY--------TTV-PRIVQLLSKSHNAHVRCGTAFALGIACAGKGL--Q----- 646 (963)
T ss_dssp HHHHHHCSCHHHHHHHHHHHHHHTSSSC--------SSH-HHHTTTGGGCSCHHHHHHHHHHHHHHTSSSCC--H-----
T ss_pred HHHhccCCcHHHHHHHHHHHHhhccCCH--------HHH-HHHHHHHHhcCCHHHHHHHHHHHHHhccCCCc--H-----
Confidence 77654 433 777888888887654321 233 36777665468899999999999999986542 1
Q ss_pred CchHHHHHHhhcCCHHHHHHHHHHHHHHHh
Q 014196 323 GIVHVSLQLALLGSPLAQRRASKLLQWFKD 352 (429)
Q Consensus 323 G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~ 352 (429)
.++..|..++.+.++.+++.|...|..+.-
T Consensus 647 ~aid~L~~L~~D~d~~Vrq~Ai~ALG~Ig~ 676 (963)
T 4ady_A 647 SAIDVLDPLTKDPVDFVRQAAMIALSMILI 676 (963)
T ss_dssp HHHHHHHHHHTCSSHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHHhc
Confidence 145677777888889999999998888874
No 84
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=97.61 E-value=0.00064 Score=74.32 Aligned_cols=301 Identities=12% Similarity=0.122 Sum_probs=183.1
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCc--h-
Q 014196 72 VLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYT--N- 148 (429)
Q Consensus 72 ~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~--n- 148 (429)
..+..+++.+...+...+..|+..+..+...+... .....|+++.|...+...... |.|+.++..|+..... .
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~k~~~--~~a~~~~~~~~~~~~~~~~~ 89 (986)
T 2iw3_A 14 KVLEELFQKLSVATADNRHEIASEVASFLNGNIIE--HDVPEHFFGELAKGIKDKKTA--ANAMQAVAHIANQSNLSPSV 89 (986)
T ss_dssp HHHHHHHHHHTTCCTTTHHHHHHHHHHHHTSSCSS--SSCCHHHHHHHHHHHTSHHHH--HHHHHHHHHHTCTTTCCTTT
T ss_pred HHHHHHHhhccccchhHHHHHHHHHHHHHhccccc--cccchhHHHHHHHHHhccCCH--HHHHHHHHHHHHhcCCCCCc
Confidence 34566777777655556677888888776533211 112236677888888764333 9999999999865421 1
Q ss_pred HHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccC
Q 014196 149 KAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAV 228 (429)
Q Consensus 149 k~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~ 228 (429)
-..++ +.+|.+..........+|..|..++..+...- ...+-...+|.|+..|.+....+.|..|+.++..|+..
T Consensus 90 e~~~~--~~~~~~~~~~~dk~~~v~~aa~~~~~~~~~~~---~~~a~~~~~~~~~~~~~~~~kw~~k~~~l~~~~~~~~~ 164 (986)
T 2iw3_A 90 EPYIV--QLVPAICTNAGNKDKEIQSVASETLISIVNAV---NPVAIKALLPHLTNAIVETNKWQEKIAILAAFSAMVDA 164 (986)
T ss_dssp HHHHH--TTHHHHHHHTTCSSHHHHHHHHHHHHHHHHHS---CGGGHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred ccchH--HHHHHHHHHhcCCchHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHH
Confidence 12222 45666655555555666666555555554221 11112456899999998775568999999999999975
Q ss_pred CCChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCChhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHH
Q 014196 229 LDNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMI 307 (429)
Q Consensus 229 ~~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~ 307 (429)
....-...=-+.||.+-+.+-|.. ++...|..++..+|..-+++.- . + .+|.||+.+. +. .....++..|..
T Consensus 165 ~~~~~~~~~~~~~p~~~~~~~d~k~~v~~~~~~~~~~~~~~~~n~d~-~--~-~~~~~~~~~~-~p--~~~~~~~~~l~~ 237 (986)
T 2iw3_A 165 AKDQVALRMPELIPVLSETMWDTKKEVKAAATAAMTKATETVDNKDI-E--R-FIPSLIQCIA-DP--TEVPETVHLLGA 237 (986)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHGGGCCCTTT-G--G-GHHHHHHHHH-CT--THHHHHHHHHTT
T ss_pred hHHHHHHhccchhcchHhhcccCcHHHHHHHHHHHHHHHhcCCCcch-h--h-hHHHHHHHhc-Ch--hhhHHHHHHhhc
Confidence 422211122378888888888764 8889999999988874333321 1 2 2458999987 33 223344444442
Q ss_pred Hh---hCCHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHhccc-cCCCCCCCCCcc-ccc--cCCCCChhhh
Q 014196 308 LA---HQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKDERQ-AKMGPHSGPQTR-RVS--IGSPVSPREA 380 (429)
Q Consensus 308 L~---~~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~~~~-~~~~~~~~~~~~-~~~--~~~~~~~~~~ 380 (429)
-. .-+.-.-. + .+|.|..-|...+...+++++-+..+|.+--+ .+....=.|.+. ++. .......+.+
T Consensus 238 ~tfv~~v~~~~l~-~----~~p~l~r~l~~~~~~~~r~~~~~~~n~~~lv~~~~~~~~f~~~l~p~~~~~~~~~~~pe~r 312 (986)
T 2iw3_A 238 TTFVAEVTPATLS-I----MVPLLSRGLNERETGIKRKSAVIIDNMCKLVEDPQVIAPFLGKLLPGLKSNFATIADPEAR 312 (986)
T ss_dssp CCCCSCCCHHHHH-H----HHHHHHHHHTSSSHHHHHHHHHHHHHHHTTCCCHHHHHHHHTTTHHHHHHHTTTCCSHHHH
T ss_pred CeeEeeecchhHH-H----HHHHHHhhhccCcchhheeeEEEEcchhhhcCCHHHHhhhhhhhhhHHHHHhhccCCHHHH
Confidence 11 11111111 2 36888888888888899999999999986321 000000012222 221 3344478899
Q ss_pred HHHHHHHHHHHHH
Q 014196 381 QEGKKMMKNLVQQ 393 (429)
Q Consensus 381 ~~~k~~l~~~~~~ 393 (429)
+.+++|++.+.+.
T Consensus 313 ~~~~~a~~~l~~~ 325 (986)
T 2iw3_A 313 EVTLRALKTLRRV 325 (986)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988764
No 85
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=97.58 E-value=0.0005 Score=65.59 Aligned_cols=152 Identities=14% Similarity=0.069 Sum_probs=118.9
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHH
Q 014196 72 VLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAI 151 (429)
Q Consensus 72 ~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~ 151 (429)
.....++..|.+++...++.+++.|+.+-.++......+++.||+..|+.+....+...+.+++.||.+|-.+. .....
T Consensus 118 ~ra~~iiekL~~~~~~~lr~aLfsLk~~~q~D~~Fa~EFI~~~GL~~Li~vi~~~~gN~q~Y~L~AL~~LM~~v-~Gm~g 196 (339)
T 3dad_A 118 VRVNAILEKLYSSSGPELRRSLFSLKQIFQEDKDLVPEFVHSEGLSCLIRVGAAADHNYQSYILRALGQLMLFV-DGMLG 196 (339)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTCTTHHHHHHHTTHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSH-HHHHH
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHhhcchHHHHHHHHhccHHHHHHHHHhcChHHHHHHHHHHHHHHhcc-ccccc
Confidence 45778889999888999999999999955567788999999999999999999999999999999999999885 46666
Q ss_pred HHh-cCccchhhhhccCCCHHHHHHHHHHHHHhhccCC-Ccccccc----------CCcHHHHHHhhh---cCCcHHHHH
Q 014196 152 MVE-AGILTKLPKNVDAVDESTRHEFGELLLSLSSLAN-THIPLSS----------SEILPFLVGILE---SGSSVETKE 216 (429)
Q Consensus 152 iv~-~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~-~~~~i~~----------~g~i~~Lv~lL~---~~~~~~~~~ 216 (429)
|++ ...|..+..++.+....+.+.|..+|..+....+ +...+.. .-.+..|+.+|. +++. +++.
T Consensus 197 vvs~~~fI~~lyslv~s~~~~V~k~AL~LL~v~V~~se~~~~lv~~av~~v~~~~~~~p~~~Lv~~L~~~~~~D~-elq~ 275 (339)
T 3dad_A 197 VVAHSDTIQWLYTLCASLSRLVVKTALKLLLVFVEYSENNAPLFIRAVNSVASTTGAPPWANLVSILEEKNGADP-ELLV 275 (339)
T ss_dssp HHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCCCTTHHHHHHHTTTTSCCH-HHHH
T ss_pred hhCCHHHHHHHHHHHcCccHHHHHHHHHHHHHHHccCcccchHHHHHHHHhhhccCCCcHHHHHHHHhccCCCCH-HHHH
Confidence 764 4578888888887667777888888888876654 3322221 123678999997 5565 7888
Q ss_pred HHHHHHHHh
Q 014196 217 LCIGALYNL 225 (429)
Q Consensus 217 ~A~~aL~nL 225 (429)
+|...+-.+
T Consensus 276 ~amtLIN~l 284 (339)
T 3dad_A 276 YTVTLINKT 284 (339)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 776655443
No 86
>2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii}
Probab=97.54 E-value=0.028 Score=48.85 Aligned_cols=214 Identities=20% Similarity=0.184 Sum_probs=148.0
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhc-CCCHHHHHHHHHHHHHhccCCCch
Q 014196 70 DCVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVS-TEVIGRRRAAIKALIQLANGTYTN 148 (429)
Q Consensus 70 ~~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~-s~~~~~~~~A~~aL~nLa~~~~~n 148 (429)
+...+..++..|...-+.+|++|+..+..+++.-++...-+ +..|+.|++ +.....-..-+.+++.++.-.+
T Consensus 30 d~~~l~~lI~~LDDDlwtV~kNAl~vi~~i~~~~~el~epl-----~~kL~vm~~ksEaIpltqeIa~a~G~la~i~P-- 102 (253)
T 2db0_A 30 DESVLKKLIELLDDDLWTVVKNAISIIMVIAKTREDLYEPM-----LKKLFSLLKKSEAIPLTQEIAKAFGQMAKEKP-- 102 (253)
T ss_dssp CHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCGGGHHHH-----HHHHHHHHHHCCSHHHHHHHHHHHHHHHHHCH--
T ss_pred hHHHHHHHHHHhccHHHHHHHhHHHHHHHHHHHhHHHHHHH-----HHHHHHHHhhcccCchHHHHHHHHhHHHHhCH--
Confidence 45678899999999889999999999999998877765544 445677765 4455554555788888886542
Q ss_pred HHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccC
Q 014196 149 KAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAV 228 (429)
Q Consensus 149 k~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~ 228 (429)
.+++ +.+|.+..-..-+++..+.+.+-+|..++... +.+ -.+.+.-+..++.+.+. . +=+.+|.-++.-
T Consensus 103 --e~v~-~vVp~lfanyrigd~kikIn~~yaLeeIaran---P~l-~~~v~rdi~smltskd~-~---Dkl~aLnFi~al 171 (253)
T 2db0_A 103 --ELVK-SMIPVLFANYRIGDEKTKINVSYALEEIAKAN---PML-MASIVRDFMSMLSSKNR-E---DKLTALNFIEAM 171 (253)
T ss_dssp --HHHH-HHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHC---HHH-HHHHHHHHHHHTSCSSH-H---HHHHHHHHHHTC
T ss_pred --HHHH-hhHHHHHHHHhcCCccceecHHHHHHHHHHhC---hHH-HHHHHHHHHHHhcCCCh-H---HHHHHHHHHHHH
Confidence 2222 45566666666778899999999999888432 111 12345667778887664 2 334566666666
Q ss_pred CCChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhC-ChhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHH
Q 014196 229 LDNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVV-TSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILM 306 (429)
Q Consensus 229 ~~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~-~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~ 306 (429)
.+|..+-+ .-.+|.|..+|.|.+ -++..++.+|.+++. +|..|..|.. -++-+. +.|...+......|.
T Consensus 172 Gen~~~yv-~PfLprL~aLL~D~deiVRaSaVEtL~~lA~~npklRkii~~-------kl~e~~-D~S~lv~~~V~egL~ 242 (253)
T 2db0_A 172 GENSFKYV-NPFLPRIINLLHDGDEIVRASAVEALVHLATLNDKLRKVVIK-------RLEELN-DTSSLVNKTVKEGIS 242 (253)
T ss_dssp CTTTHHHH-GGGHHHHHGGGGCSSHHHHHHHHHHHHHHHTSCHHHHHHHHH-------HHHHCC-CSCHHHHHHHHHHHH
T ss_pred hccCcccc-CcchHHHHHHHcCcchhhhHHHHHHHHHHHHcCHHHHHHHHH-------HHHHhc-CcHHHHHHHHHHHHH
Confidence 67775544 456899999999887 567788999999998 6766665543 344455 567777777666776
Q ss_pred HHhh
Q 014196 307 ILAH 310 (429)
Q Consensus 307 ~L~~ 310 (429)
.+..
T Consensus 243 rl~l 246 (253)
T 2db0_A 243 RLLL 246 (253)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6553
No 87
>1ho8_A Vacuolar ATP synthase subunit H; heat repeat, hydrolase; 2.95A {Saccharomyces cerevisiae} SCOP: a.118.1.9
Probab=97.47 E-value=0.00081 Score=67.26 Aligned_cols=231 Identities=13% Similarity=0.078 Sum_probs=145.8
Q ss_pred HHHhhcC-CCHHHHHHHHHHHHHhccCCCchHHHHHhcC--ccchhhhhccC---------------C--CHHHHHHHHH
Q 014196 119 LVSMVST-EVIGRRRAAIKALIQLANGTYTNKAIMVEAG--ILTKLPKNVDA---------------V--DESTRHEFGE 178 (429)
Q Consensus 119 Lv~lL~s-~~~~~~~~A~~aL~nLa~~~~~nk~~iv~~G--~i~~Lv~lL~~---------------~--~~~~~~~aa~ 178 (429)
++..|.. .+...+.-++.+|..|...+ +.|..+++.+ .+|+++.++.. . ....+.++.-
T Consensus 172 ~~~~L~~~~~~~~~~i~v~~L~~Ll~~~-~~R~~f~~~~~~~~~~l~~il~~~~~~~~~~~~~~~~~~~~~~Ql~Y~~ll 250 (480)
T 1ho8_A 172 LINILQNIEQMDTCYVCIRLLQELAVIP-EYRDVIWLHEKKFMPTLFKILQRATDSQLATRIVATNSNHLGIQLQYHSLL 250 (480)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHHTSH-HHHHHHHTTHHHHHHHHHHHHHHHHC-------------CCHHHHHHHHHH
T ss_pred HHHHhccccCCchHHHHHHHHHHHhcch-hHHHHHHHcccchhHHHHHHHHHhhccccccccccccCCCccHHHHHHHHH
Confidence 4455554 24555677888888888886 5888888654 36666554431 1 1345677888
Q ss_pred HHHHhhccCCCccccccCCcH--HHHHHhhhcCCcHHHHHHHHHHHHHhccCCC-C----hh-HHHhcCcHHHHHHhccC
Q 014196 179 LLLSLSSLANTHIPLSSSEIL--PFLVGILESGSSVETKELCIGALYNLSAVLD-N----AR-PMVSNGVVHTLLKLCSM 250 (429)
Q Consensus 179 ~L~~Ls~~~~~~~~i~~~g~i--~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~-n----~~-~iv~~G~v~~Lv~lL~~ 250 (429)
++|-||..++....+...+.. +.|+.+++....+++.+-++.+|.||..... + .. .++..++ ++++..|..
T Consensus 251 ~iWlLSF~~~~~~~l~~~~i~~~~~L~~i~k~s~KEKvvRv~la~l~Nll~~~~~~~~~~~~~~~~~~~~-l~~l~~L~~ 329 (480)
T 1ho8_A 251 LIWLLTFNPVFANELVQKYLSDFLDLLKLVKITIKEKVSRLCISIILQCCSTRVKQHKKVIKQLLLLGNA-LPTVQSLSE 329 (480)
T ss_dssp HHHHHTTSHHHHHHHHTTSHHHHHHHHHHHHHCCSHHHHHHHHHHHHHTTSSSSTTHHHHHHHHHHHHCH-HHHHHHHHS
T ss_pred HHHHHHcCHHHHHHHHhcchHHHHHHHHHHHhhccchhHHHHHHHHHHHhcccchhhhhHHHHHHHHccc-hHHHHHHhh
Confidence 999999887655555555543 6788888887666888999999999987541 2 22 2333444 567776653
Q ss_pred C---c-chHHHH---HHHHH----HhhCChhcHHHHhc-------------------------CCCChHHHHHhcccC--
Q 014196 251 K---E-RLSEKS---LATLG----NLVVTSTGKKAMED-------------------------SPLVPESLIEILTWE-- 292 (429)
Q Consensus 251 ~---~-~~~~~a---~~~L~----~La~~~e~~~~i~~-------------------------~~~i~~~Lv~~L~~~-- 292 (429)
. | ++.+.. ...|. .++..++...++.. ...++..|+++|...
T Consensus 330 rk~~Dedl~edl~~L~e~L~~~~~~ltsfDeY~~El~sG~L~WSP~H~se~FW~ENa~kf~e~~~~llk~L~~iL~~~~~ 409 (480)
T 1ho8_A 330 RKYSDEELRQDISNLKEILENEYQELTSFDEYVAELDSKLLCWSPPHVDNGFWSDNIDEFKKDNYKIFRQLIELLQAKVR 409 (480)
T ss_dssp SCCSSHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHTCCCCCGGGGCHHHHHHHSGGGSSGGGHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHhcCCcccCCCccchhHHHHHHHHHHhcchHHHHHHHHHHhhhcc
Confidence 2 2 333322 12221 11212232222221 123445778888621
Q ss_pred -------CChhHHHHHHHHHHHHhhCCHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHH
Q 014196 293 -------EKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFK 351 (429)
Q Consensus 293 -------~s~~~~e~A~~~L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~ 351 (429)
.++....-|+.=++.++.+-|+.+..+-+.|+=..+.+++.+.++.+|..|...++-+-
T Consensus 410 ~~~~~~s~d~~~laVAc~Digefvr~~P~gr~i~~~lg~K~~VM~Lm~h~d~~Vr~~AL~avQklm 475 (480)
T 1ho8_A 410 NGDVNAKQEKIIIQVALNDITHVVELLPESIDVLDKTGGKADIMELLNHSDSRVKYEALKATQAII 475 (480)
T ss_dssp TTCCCSHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHSHHHHHHHHTSCSSHHHHHHHHHHHHHHH
T ss_pred ccccccCCCcceEEeecccHHHHHHHCcchhHHHHHcCcHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 13444555666677777766788888888899899999999999999999998776553
No 88
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=97.47 E-value=0.0013 Score=62.79 Aligned_cols=150 Identities=12% Similarity=0.072 Sum_probs=116.6
Q ss_pred HHHHHhhhcCCcHHHHHHHHHHHHH-hccCCCChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCChhcHHHHhc
Q 014196 200 PFLVGILESGSSVETKELCIGALYN-LSAVLDNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTSTGKKAMED 277 (429)
Q Consensus 200 ~~Lv~lL~~~~~~~~~~~A~~aL~n-Ls~~~~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~e~~~~i~~ 277 (429)
..+++-|.+++. +.++.++--|.. ++.+......++..|++..|+....+.+ .++..++.+|.+|-.+.+|-..+++
T Consensus 121 ~~iiekL~~~~~-~~lr~aLfsLk~~~q~D~~Fa~EFI~~~GL~~Li~vi~~~~gN~q~Y~L~AL~~LM~~v~Gm~gvvs 199 (339)
T 3dad_A 121 NAILEKLYSSSG-PELRRSLFSLKQIFQEDKDLVPEFVHSEGLSCLIRVGAAADHNYQSYILRALGQLMLFVDGMLGVVA 199 (339)
T ss_dssp HHHHHHHHHCCH-HHHHHHHHHHHHHHHTCTTHHHHHHHTTHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSHHHHHHHHH
T ss_pred HHHHHHHhcCCc-HHHHHHHHHHHHHhhcchHHHHHHHHhccHHHHHHHHHhcChHHHHHHHHHHHHHHhccccccchhC
Confidence 345566666665 456668777877 6667777899999999999999998765 8999999999999999999999988
Q ss_pred CCCChHHHHHhcccCCChhHHHHHHHHHHHHhhCCHHHHHHHHhC--------C--chHHHHHHhh---cCCHHHHHHHH
Q 014196 278 SPLVPESLIEILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKS--------G--IVHVSLQLAL---LGSPLAQRRAS 344 (429)
Q Consensus 278 ~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~~~~~~~~~i~~~--------G--~v~~L~~ll~---~~~~~~k~~A~ 344 (429)
+...+..|+.++. +....+...|..+|..++..++.....+.++ | -.+.|+.+++ .++...+.+|.
T Consensus 200 ~~~fI~~lyslv~-s~~~~V~k~AL~LL~v~V~~se~~~~lv~~av~~v~~~~~~~p~~~Lv~~L~~~~~~D~elq~~am 278 (339)
T 3dad_A 200 HSDTIQWLYTLCA-SLSRLVVKTALKLLLVFVEYSENNAPLFIRAVNSVASTTGAPPWANLVSILEEKNGADPELLVYTV 278 (339)
T ss_dssp CHHHHHHHHHGGG-CSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCCCTTHHHHHHHTTTTSCCHHHHHHHH
T ss_pred CHHHHHHHHHHHc-CccHHHHHHHHHHHHHHHccCcccchHHHHHHHHhhhccCCCcHHHHHHHHhccCCCCHHHHHHHH
Confidence 7767778888887 6677888999999999998765444444332 1 3678888997 56888899988
Q ss_pred HHHHHHH
Q 014196 345 KLLQWFK 351 (429)
Q Consensus 345 ~lL~~l~ 351 (429)
.++.-+-
T Consensus 279 tLIN~lL 285 (339)
T 3dad_A 279 TLINKTL 285 (339)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8765443
No 89
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=97.45 E-value=0.004 Score=60.47 Aligned_cols=265 Identities=10% Similarity=0.014 Sum_probs=139.2
Q ss_pred ccchhhHHHHHHHHHhhcccccCCCCCCCChhhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHH
Q 014196 38 EKSRTLKNINCQEEKQVIIEEKNHEQSDIEEDDCVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQ 117 (429)
Q Consensus 38 ~PN~~Lr~lI~~W~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~ 117 (429)
.+|+.+|++..-...... .. + ++ .--.+..+.+.++++|+.++-.|++.|.++... +.-+. ..+
T Consensus 79 s~d~~lKrLvYLyl~~~~-----~~--~-~e-~iLv~Nsl~kDl~~~N~~iR~lALRtL~~I~~~--~m~~~-----l~~ 142 (355)
T 3tjz_B 79 SNDPTLRRMCYLTIKEMS-----CI--A-ED-VIIVTSSLTKDMTGKEDSYRGPAVRALCQITDS--TMLQA-----IER 142 (355)
T ss_dssp CCCHHHHHHHHHHHHHHT-----TT--S-SC-GGGGHHHHHHHHHSSCHHHHHHHHHHHHHHCCT--TTHHH-----HHH
T ss_pred CCCHHHHHHHHHHHHHhC-----CC--H-HH-HHHHHHHHHhhcCCCcHhHHHHHHHHHhcCCCH--HHHHH-----HHH
Confidence 489999999998776551 11 1 11 234578888999999999998899988888643 33233 366
Q ss_pred HHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccccccCC
Q 014196 118 MLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPLSSSE 197 (429)
Q Consensus 118 ~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g 197 (429)
.+.++|.+.++-++..|+.+...|....+ + +++ +.++.+-.++.+.+.-+..+|..+|..+...+. .
T Consensus 143 ~lk~~L~d~~pyVRk~A~l~~~kL~~~~p---e-~v~-~~~~~l~~ll~d~n~~V~~~Al~lL~ei~~~d~--------~ 209 (355)
T 3tjz_B 143 YMKQAIVDKVPSVSSSALVSSLHLLKCSF---D-VVK-RWVNEAQEAASSDNIMVQYHALGLLYHVRKNDR--------L 209 (355)
T ss_dssp HHHHHHTCSSHHHHHHHHHHHHHHTTTCH---H-HHH-TTHHHHHHHTTCSSHHHHHHHHHHHHHHHTTCH--------H
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHhccCH---H-HHH-HHHHHHHHHhcCCCccHHHHHHHHHHHHHhhch--------H
Confidence 78889999999999999999998876642 3 333 678888888888777788888888999885431 1
Q ss_pred cHHHHHHhhhcCC--cHHHHHHHHHHHHHhccCCCChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCChhcHHH
Q 014196 198 ILPFLVGILESGS--SVETKELCIGALYNLSAVLDNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTSTGKKA 274 (429)
Q Consensus 198 ~i~~Lv~lL~~~~--~~~~~~~A~~aL~nLs~~~~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~e~~~~ 274 (429)
++..|+.-+..+. .+-.+..-++.+..++..++. -.....++.+..+|+..+ .++-.|+.++..+...+. .
T Consensus 210 a~~kLv~~l~~~~l~~~~~q~~llr~l~~~~~~d~~---~~~~~~~~~l~~~L~~~~~aVvyEa~k~I~~l~~~~~---~ 283 (355)
T 3tjz_B 210 AVSKMISKFTRHGLKSPFAYCMMIRVASRQLEDEDG---SRDSPLFDFIESCLRNKHEMVVYEAASAIVNLPGCSA---K 283 (355)
T ss_dssp HHHHHHHHHHSSCCSCHHHHHHHHHHHTCC--------------------CCCCCSSHHHHHHHHHHHTC----------
T ss_pred HHHHHHHHHhcCCCcChHHHHHHHHHHHHhccccch---hhHHHHHHHHHHHHcCCChHHHHHHHHHHHhccCCCH---H
Confidence 4566666665532 112333333433333332200 011344556666676654 777788888877654221 1
Q ss_pred HhcCCCChHHHHHhcccCCChhHHHHHHHHHHHHhhCCHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHH
Q 014196 275 MEDSPLVPESLIEILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASK 345 (429)
Q Consensus 275 i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~ 345 (429)
+.. .++. .|..++. +.++..|-.|+..|..+....|+..+. .-.-+.+++.+++..+...|..
T Consensus 284 ~~~-~a~~-~L~~fLs-s~d~niryvaLr~L~~l~~~~P~~v~~-----~n~~ie~li~d~n~sI~t~Ait 346 (355)
T 3tjz_B 284 ELA-PAVS-VLQLFCS-SPKAALRYAAVRTLNKVAMKHPSAVTA-----CNLDLENLVTDANRSIATLAIT 346 (355)
T ss_dssp -----CCC-THHHHHH-SSSSSSHHHHHHCC----------------------------------------
T ss_pred HHH-HHHH-HHHHHHc-CCCchHHHHHHHHHHHHHHHCcHHHHH-----HHHHHHHHccCCcHhHHHHHHH
Confidence 222 2333 5666776 677788888887777777654433221 2244555666665555555553
No 90
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=97.43 E-value=0.0098 Score=64.52 Aligned_cols=234 Identities=9% Similarity=-0.078 Sum_probs=149.1
Q ss_pred HHHHHHHhc---CCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCC--------HHHHHHHHHHHHHhc
Q 014196 74 LQKSVKRLH---FGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEV--------IGRRRAAIKALIQLA 142 (429)
Q Consensus 74 l~~lv~~L~---~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~--------~~~~~~A~~aL~nLa 142 (429)
+..+-..|. ++++..+..|+..|..+..... .. ++..|...|.+++ +.++..|+..|+-..
T Consensus 394 l~~L~~yL~~~~s~~~~ik~GAllaLGli~ag~~---~~-----~~~lL~~~L~~~~~~~~~~~~~~ir~gAaLGLGla~ 465 (963)
T 4ady_A 394 KKVMAPYLPGSRASSRFIKGGSLYGLGLIYAGFG---RD-----TTDYLKNIIVENSGTSGDEDVDVLLHGASLGIGLAA 465 (963)
T ss_dssp HHHHTTTSTTSCCSCHHHHHHHHHHHHHHTTTTT---HH-----HHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHhccccCCCcHHHHHHHHHHHHHhcCCCc---HH-----HHHHHHHHHcCccccccccccHHHHHHHHHHHHHHh
Confidence 455555565 5578888889999998765332 11 4677888887655 668888888998877
Q ss_pred cCCCchHHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHH
Q 014196 143 NGTYTNKAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESGSSVETKELCIGAL 222 (429)
Q Consensus 143 ~~~~~nk~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL 222 (429)
.+. .+..+ ++.|..+|...+...++.++.+|.-+-.-..+ ..++..|++.+.+.....+++.++.+|
T Consensus 466 ~GS--~~eev-----~e~L~~~L~dd~~~~~~~AalALGli~vGTgn------~~ai~~LL~~~~e~~~e~vrR~aalgL 532 (963)
T 4ady_A 466 MGS--ANIEV-----YEALKEVLYNDSATSGEAAALGMGLCMLGTGK------PEAIHDMFTYSQETQHGNITRGLAVGL 532 (963)
T ss_dssp TTC--CCHHH-----HHHHHHHHHTCCHHHHHHHHHHHHHHHTTCCC------HHHHHHHHHHHHHCSCHHHHHHHHHHH
T ss_pred cCC--CCHHH-----HHHHHHHHhcCCHHHHHHHHHHHhhhhcccCC------HHHHHHHHHHHhccCcHHHHHHHHHHH
Confidence 665 22333 33466777655555555555555544221111 235677888766554447888888888
Q ss_pred HHhccCCCChhHHHhcCcHHHHHHhccC-CcchHHHHHHHHHHhhCC-hhcHHHHhcCCCChHHHHHhcccCCChhHHHH
Q 014196 223 YNLSAVLDNARPMVSNGVVHTLLKLCSM-KERLSEKSLATLGNLVVT-STGKKAMEDSPLVPESLIEILTWEEKPKCQEL 300 (429)
Q Consensus 223 ~nLs~~~~n~~~iv~~G~v~~Lv~lL~~-~~~~~~~a~~~L~~La~~-~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~ 300 (429)
..+.... ...++.+++.|.. .+.+.+.+......++.. ..+..+| ..|++.+..+.+..++..
T Consensus 533 Gll~~g~--------~e~~~~li~~L~~~~dp~vRygaa~alglAyaGTGn~~aI-------q~LL~~~~~d~~d~VRra 597 (963)
T 4ady_A 533 ALINYGR--------QELADDLITKMLASDESLLRYGGAFTIALAYAGTGNNSAV-------KRLLHVAVSDSNDDVRRA 597 (963)
T ss_dssp HHHTTTC--------GGGGHHHHHHHHHCSCHHHHHHHHHHHHHHTTTSCCHHHH-------HHHHHHHHHCSCHHHHHH
T ss_pred HhhhCCC--------hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcCCCCHHHH-------HHHHHHhccCCcHHHHHH
Confidence 8776543 2457778887764 346666655444444442 2222222 135555443567788999
Q ss_pred HHHHHHHHhhCCHHHHHHHHhCCchHHHHHHh-hcCCHHHHHHHHHHHHHHHh
Q 014196 301 SAYILMILAHQSSEQRDKMAKSGIVHVSLQLA-LLGSPLAQRRASKLLQWFKD 352 (429)
Q Consensus 301 A~~~L~~L~~~~~~~~~~i~~~G~v~~L~~ll-~~~~~~~k~~A~~lL~~l~~ 352 (429)
|+.+|..++.+++ ..++.++.++ +++++.+|..|++.|..+.-
T Consensus 598 AViaLGlI~~g~~---------e~v~rlv~~L~~~~d~~VR~gAalALGli~a 641 (963)
T 4ady_A 598 AVIALGFVLLRDY---------TTVPRIVQLLSKSHNAHVRCGTAFALGIACA 641 (963)
T ss_dssp HHHHHHHHTSSSC---------SSHHHHTTTGGGCSCHHHHHHHHHHHHHHTS
T ss_pred HHHHHHhhccCCH---------HHHHHHHHHHHhcCCHHHHHHHHHHHHHhcc
Confidence 9999998876653 2466777644 45799999999999998863
No 91
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=97.37 E-value=0.0051 Score=67.26 Aligned_cols=264 Identities=12% Similarity=0.125 Sum_probs=173.1
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchH---HHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCch
Q 014196 72 VLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVK---IKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTN 148 (429)
Q Consensus 72 ~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~---~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~n 148 (429)
..+..+.+.+...... ..|+..+..++.+... .--.++ +.+|.++..+.+.+..++++|..++..+...-..+
T Consensus 54 ~~~~~~~~~~~~k~~~--~~a~~~~~~~~~~~~~~~~~e~~~~--~~~~~~~~~~~dk~~~v~~aa~~~~~~~~~~~~~~ 129 (986)
T 2iw3_A 54 HFFGELAKGIKDKKTA--ANAMQAVAHIANQSNLSPSVEPYIV--QLVPAICTNAGNKDKEIQSVASETLISIVNAVNPV 129 (986)
T ss_dssp HHHHHHHHHHTSHHHH--HHHHHHHHHHTCTTTCCTTTHHHHH--TTHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSCGG
T ss_pred hHHHHHHHHHhccCCH--HHHHHHHHHHHHhcCCCCCcccchH--HHHHHHHHHhcCCchHHHHHHHHHHHHHHHhCCHH
Confidence 4455666666543222 7788889999865421 222333 56888888888888899999888877776543222
Q ss_pred HHHHHhcCccchhhhhccCC-CHHHHHHHHHHHHHhhccCCCccccc--cCCcHHHHHHhhhcCCcHHHHHHHHHHHHHh
Q 014196 149 KAIMVEAGILTKLPKNVDAV-DESTRHEFGELLLSLSSLANTHIPLS--SSEILPFLVGILESGSSVETKELCIGALYNL 225 (429)
Q Consensus 149 k~~iv~~G~i~~Lv~lL~~~-~~~~~~~aa~~L~~Ls~~~~~~~~i~--~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nL 225 (429)
. + ...+|.|+..|.+. +...+..|..++..|+... ...++ -...||.+...+.+-.+ +++..|..++..+
T Consensus 130 a--~--~~~~~~~~~~~~~~~kw~~k~~~l~~~~~~~~~~--~~~~~~~~~~~~p~~~~~~~d~k~-~v~~~~~~~~~~~ 202 (986)
T 2iw3_A 130 A--I--KALLPHLTNAIVETNKWQEKIAILAAFSAMVDAA--KDQVALRMPELIPVLSETMWDTKK-EVKAAATAAMTKA 202 (986)
T ss_dssp G--H--HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHTTCSSH-HHHHHHHHHHHHH
T ss_pred H--H--HHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh--HHHHHHhccchhcchHhhcccCcH-HHHHHHHHHHHHH
Confidence 2 2 35678888888654 4677777888888888543 23343 24567777777666665 7999999999999
Q ss_pred ccCCCChhHHHhcCcHHHHHHhccCCcchHHHHHHHHHHhhCChhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHH
Q 014196 226 SAVLDNARPMVSNGVVHTLLKLCSMKERLSEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYIL 305 (429)
Q Consensus 226 s~~~~n~~~iv~~G~v~~Lv~lL~~~~~~~~~a~~~L~~La~~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L 305 (429)
|..-.|+.. ...+|.|++.+.++++ +.+|+..|..-.--.+.-.-... -+.|.|.+-|. ..+...+..++-+.
T Consensus 203 ~~~~~n~d~---~~~~~~~~~~~~~p~~-~~~~~~~l~~~tfv~~v~~~~l~--~~~p~l~r~l~-~~~~~~~r~~~~~~ 275 (986)
T 2iw3_A 203 TETVDNKDI---ERFIPSLIQCIADPTE-VPETVHLLGATTFVAEVTPATLS--IMVPLLSRGLN-ERETGIKRKSAVII 275 (986)
T ss_dssp GGGCCCTTT---GGGHHHHHHHHHCTTH-HHHHHHHHTTCCCCSCCCHHHHH--HHHHHHHHHHT-SSSHHHHHHHHHHH
T ss_pred HhcCCCcch---hhhHHHHHHHhcChhh-hHHHHHHhhcCeeEeeecchhHH--HHHHHHHhhhc-cCcchhheeeEEEE
Confidence 987777632 3468999999998844 45555444332221111111110 11246666666 56777788899999
Q ss_pred HHHhh--CCHHHHHHHHhCCchHHHHHHhhc-CCHHHHHHHHHHHHHHHhcc
Q 014196 306 MILAH--QSSEQRDKMAKSGIVHVSLQLALL-GSPLAQRRASKLLQWFKDER 354 (429)
Q Consensus 306 ~~L~~--~~~~~~~~i~~~G~v~~L~~ll~~-~~~~~k~~A~~lL~~l~~~~ 354 (429)
-|||. .++......+ ...+|.|-..... ..|++++.|...+..|.+..
T Consensus 276 ~n~~~lv~~~~~~~~f~-~~l~p~~~~~~~~~~~pe~r~~~~~a~~~l~~~~ 326 (986)
T 2iw3_A 276 DNMCKLVEDPQVIAPFL-GKLLPGLKSNFATIADPEAREVTLRALKTLRRVG 326 (986)
T ss_dssp HHHHTTCCCHHHHHHHH-TTTHHHHHHHTTTCCSHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhcCCHHHHhhhh-hhhhhHHHHHhhccCCHHHHHHHHHHHHHHHHhh
Confidence 99998 5665555444 3467777776665 57999999988888777643
No 92
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=97.25 E-value=0.013 Score=52.92 Aligned_cols=218 Identities=15% Similarity=0.114 Sum_probs=147.8
Q ss_pred cHHHHHHhhcCCCHHHHHHHHHHHHHhccCCC-chHHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCc-cc
Q 014196 115 VIQMLVSMVSTEVIGRRRAAIKALIQLANGTY-TNKAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTH-IP 192 (429)
Q Consensus 115 ~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~-~nk~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~-~~ 192 (429)
.+..|..+|.+.|+.++.+++.+|..+-..-+ .-+..+++ ..+|.++.++.+.+..+.-.|..+|..|-...+.. ..
T Consensus 34 ~l~~L~~LL~dkD~~vk~raL~~LeellK~~~~~l~~~~~e-~~Ld~iI~llk~~dEkval~A~r~L~~LLe~vpL~~~~ 112 (265)
T 3b2a_A 34 ALFLILELAGEDDETTRLRAFVALGEILKRADSDLRMMVLE-RHLDVFINALSQENEKVTIKALRALGYLVKDVPMGSKT 112 (265)
T ss_dssp HHHHHHHHTTSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHH-HHHHHHHHTCCSTTHHHHHHHHHHHHHHHTTCCBCHHH
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHHhccccccHHHHH-HHHHHHHHHHhccchhHHHHHHHHHHHHHcCCCCCHHH
Confidence 57789999999999999999999999877632 23444444 46788899998888777778888888876443211 11
Q ss_pred cccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCCCChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCCh--
Q 014196 193 LSSSEILPFLVGILESGSSVETKELCIGALYNLSAVLDNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTS-- 269 (429)
Q Consensus 193 i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~-- 269 (429)
+ .-.+..|..++.+++. -....|+..|..|......+ +++..+..++.+.+ .++..++.+|-+++...
T Consensus 113 y--~Kl~~aL~dlik~~~~-il~~eaae~Lgklkv~~~~~------~V~~~l~sLl~Skd~~vK~agl~~L~eia~~S~D 183 (265)
T 3b2a_A 113 F--LKAAKTLVSLLESPDD-MMRIETIDVLSKLQPLEDSK------LVRTYINELVVSPDLYTKVAGFCLFLNMLNSSAD 183 (265)
T ss_dssp H--HHHHHHHHHHTTSCCH-HHHHHHHHHHHHCCBSCCCH------HHHHHHHHHHTCSSHHHHHHHHHHHHHHGGGCSS
T ss_pred H--HHHHHHHHHHhcCCCc-hHHHHHHHHhCcCCcccchH------HHHHHHHHHHhCCChhHHHHHHHHHHHhhcccCC
Confidence 1 1246788888888887 68889999999883322221 34667888886555 88888999999998733
Q ss_pred -hcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHHHhhCC--HHHHHHHHhCCchHHHHHHh-hcCCHHHHHHHHH
Q 014196 270 -TGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMILAHQS--SEQRDKMAKSGIVHVSLQLA-LLGSPLAQRRASK 345 (429)
Q Consensus 270 -e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~~~--~~~~~~i~~~G~v~~L~~ll-~~~~~~~k~~A~~ 345 (429)
+.-..|.+ -+-++|. +.++..++.|..+|..+.+.. ++....+. ++....-.+. ..|.|..+.+|..
T Consensus 184 ~~i~~~I~~------eI~elL~-~eD~~l~e~aLd~Le~ils~pi~~~~~~~~~--~~~~~v~~l~~~~~~~~~~~ka~~ 254 (265)
T 3b2a_A 184 SGHLTLILD------EIPSLLQ-NDNEFIVELALDVLEKALSFPLLENVKIELL--KISRIVDGLVYREGAPIIRLKAKK 254 (265)
T ss_dssp CCCGGGTTT------THHHHHT-CSCHHHHHHHHHHHHHHTTSCCCSCCHHHHH--HHHHHHHHGGGCSSCHHHHHHHHH
T ss_pred HHHHHHHHH------HHHHHHc-CCCHHHHHHHHHHHHHHHcCcccHhHHHHHH--HHHHHHHHHHHhcCChhHHHHHHH
Confidence 33333333 3556777 679999999999999998752 11222221 1222222233 4588888888887
Q ss_pred HHHHHH
Q 014196 346 LLQWFK 351 (429)
Q Consensus 346 lL~~l~ 351 (429)
+-..+-
T Consensus 255 v~~~le 260 (265)
T 3b2a_A 255 VSDLID 260 (265)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 655443
No 93
>2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii}
Probab=97.20 E-value=0.052 Score=47.21 Aligned_cols=213 Identities=16% Similarity=0.188 Sum_probs=142.5
Q ss_pred cCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHHHHhcCccchhhhhccCC-CHHHHHHHHHHHHHhhccCCCcc
Q 014196 113 LGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAV-DESTRHEFGELLLSLSSLANTHI 191 (429)
Q Consensus 113 ~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~iv~~G~i~~Lv~lL~~~-~~~~~~~aa~~L~~Ls~~~~~~~ 191 (429)
..++..++.+|.++--.+|.+|+..+.+++..-++....++ ..|.-+++.. .....++.+.++..++ ..++
T Consensus 31 ~~~l~~lI~~LDDDlwtV~kNAl~vi~~i~~~~~el~epl~-----~kL~vm~~ksEaIpltqeIa~a~G~la---~i~P 102 (253)
T 2db0_A 31 ESVLKKLIELLDDDLWTVVKNAISIIMVIAKTREDLYEPML-----KKLFSLLKKSEAIPLTQEIAKAFGQMA---KEKP 102 (253)
T ss_dssp HHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCGGGHHHHH-----HHHHHHHHHCCSHHHHHHHHHHHHHHH---HHCH
T ss_pred HHHHHHHHHHhccHHHHHHHhHHHHHHHHHHHhHHHHHHHH-----HHHHHHHhhcccCchHHHHHHHHhHHH---HhCH
Confidence 34678899999988788999999999999877544444333 3345555433 3555567788888888 4444
Q ss_pred ccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCCCChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCChh
Q 014196 192 PLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVLDNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTST 270 (429)
Q Consensus 192 ~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~e 270 (429)
.+. .+.+|.|..-..-|++ ++|-+-..+|-.++.... ..-.+++.-+..++.+++ .-+-.|+..+..+. +
T Consensus 103 e~v-~~vVp~lfanyrigd~-kikIn~~yaLeeIaranP----~l~~~v~rdi~smltskd~~Dkl~aLnFi~alG---e 173 (253)
T 2db0_A 103 ELV-KSMIPVLFANYRIGDE-KTKINVSYALEEIAKANP----MLMASIVRDFMSMLSSKNREDKLTALNFIEAMG---E 173 (253)
T ss_dssp HHH-HHHHHHHHHHSCCCSH-HHHHHHHHHHHHHHHHCH----HHHHHHHHHHHHHTSCSSHHHHHHHHHHHHTCC---T
T ss_pred HHH-HhhHHHHHHHHhcCCc-cceecHHHHHHHHHHhCh----HHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHh---c
Confidence 442 2346666666667877 899988889988886322 122456777888888765 22333444444432 2
Q ss_pred cHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHHHhhCCHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHH
Q 014196 271 GKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWF 350 (429)
Q Consensus 271 ~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l 350 (429)
+.-..+. +-.| .|..+|. +++.-++..|+.+|.+++..++..|..+.. -++=+.+.++.++++...-|..+
T Consensus 174 n~~~yv~-PfLp-rL~aLL~-D~deiVRaSaVEtL~~lA~~npklRkii~~------kl~e~~D~S~lv~~~V~egL~rl 244 (253)
T 2db0_A 174 NSFKYVN-PFLP-RIINLLH-DGDEIVRASAVEALVHLATLNDKLRKVVIK------RLEELNDTSSLVNKTVKEGISRL 244 (253)
T ss_dssp TTHHHHG-GGHH-HHHGGGG-CSSHHHHHHHHHHHHHHHTSCHHHHHHHHH------HHHHCCCSCHHHHHHHHHHHHHH
T ss_pred cCccccC-cchH-HHHHHHc-CcchhhhHHHHHHHHHHHHcCHHHHHHHHH------HHHHhcCcHHHHHHHHHHHHHHH
Confidence 2223332 3454 8999998 789999999999999999988888875543 34445566788887777655444
Q ss_pred H
Q 014196 351 K 351 (429)
Q Consensus 351 ~ 351 (429)
-
T Consensus 245 ~ 245 (253)
T 2db0_A 245 L 245 (253)
T ss_dssp H
T ss_pred H
Confidence 3
No 94
>1ho8_A Vacuolar ATP synthase subunit H; heat repeat, hydrolase; 2.95A {Saccharomyces cerevisiae} SCOP: a.118.1.9
Probab=96.89 E-value=0.0043 Score=62.01 Aligned_cols=227 Identities=13% Similarity=0.095 Sum_probs=141.1
Q ss_pred HHHHhcCC-CHHHHHHHHHHHHHHhhhchHHHHHHHhcC--cHHHHHHhhcC---------------C--CHHHHHHHHH
Q 014196 77 SVKRLHFG-SWEEKEMAAKEIEKLAKEDVKIKKLMAELG--VIQMLVSMVST---------------E--VIGRRRAAIK 136 (429)
Q Consensus 77 lv~~L~~~-~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G--~i~~Lv~lL~s---------------~--~~~~~~~A~~ 136 (429)
++..|... +.+.+--++..|..+.+. ++.|..+.+.+ .+|+++.++.. . ...++-+++.
T Consensus 172 ~~~~L~~~~~~~~~~i~v~~L~~Ll~~-~~~R~~f~~~~~~~~~~l~~il~~~~~~~~~~~~~~~~~~~~~~Ql~Y~~ll 250 (480)
T 1ho8_A 172 LINILQNIEQMDTCYVCIRLLQELAVI-PEYRDVIWLHEKKFMPTLFKILQRATDSQLATRIVATNSNHLGIQLQYHSLL 250 (480)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHHTS-HHHHHHHHTTHHHHHHHHHHHHHHHHC-------------CCHHHHHHHHHH
T ss_pred HHHHhccccCCchHHHHHHHHHHHhcc-hhHHHHHHHcccchhHHHHHHHHHhhccccccccccccCCCccHHHHHHHHH
Confidence 44455542 344455678888888764 57899888653 47777655441 1 2456788999
Q ss_pred HHHHhccCCCchHHHHHhcCcc--chhhhhccC-CCHHHHHHHHHHHHHhhccCC-Ccc-----ccccCCcHHHHHHhhh
Q 014196 137 ALIQLANGTYTNKAIMVEAGIL--TKLPKNVDA-VDESTRHEFGELLLSLSSLAN-THI-----PLSSSEILPFLVGILE 207 (429)
Q Consensus 137 aL~nLa~~~~~nk~~iv~~G~i--~~Lv~lL~~-~~~~~~~~aa~~L~~Ls~~~~-~~~-----~i~~~g~i~~Lv~lL~ 207 (429)
+++-|++.. +....+.+.+.. +.|+.+++. ....+.+-+.++|.||..... ... .+...++ +.+++.|.
T Consensus 251 ~iWlLSF~~-~~~~~l~~~~i~~~~~L~~i~k~s~KEKvvRv~la~l~Nll~~~~~~~~~~~~~~~~~~~~-l~~l~~L~ 328 (480)
T 1ho8_A 251 LIWLLTFNP-VFANELVQKYLSDFLDLLKLVKITIKEKVSRLCISIILQCCSTRVKQHKKVIKQLLLLGNA-LPTVQSLS 328 (480)
T ss_dssp HHHHHTTSH-HHHHHHHTTSHHHHHHHHHHHHHCCSHHHHHHHHHHHHHTTSSSSTTHHHHHHHHHHHHCH-HHHHHHHH
T ss_pred HHHHHHcCH-HHHHHHHhcchHHHHHHHHHHHhhccchhHHHHHHHHHHHhcccchhhhhHHHHHHHHccc-hHHHHHHh
Confidence 999999986 355566666543 455666653 446677788889999986541 111 1212333 55666665
Q ss_pred cC---CcHHHHHHHH-------HHHHHhc---------------cCC---------CChhHHHhc--CcHHHHHHhccC-
Q 014196 208 SG---SSVETKELCI-------GALYNLS---------------AVL---------DNARPMVSN--GVVHTLLKLCSM- 250 (429)
Q Consensus 208 ~~---~~~~~~~~A~-------~aL~nLs---------------~~~---------~n~~~iv~~--G~v~~Lv~lL~~- 250 (429)
.. |. ++.++-- .....++ -.+ +|..++-+. ..+..|+++|..
T Consensus 329 ~rk~~De-dl~edl~~L~e~L~~~~~~ltsfDeY~~El~sG~L~WSP~H~se~FW~ENa~kf~e~~~~llk~L~~iL~~~ 407 (480)
T 1ho8_A 329 ERKYSDE-ELRQDISNLKEILENEYQELTSFDEYVAELDSKLLCWSPPHVDNGFWSDNIDEFKKDNYKIFRQLIELLQAK 407 (480)
T ss_dssp SSCCSSH-HHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHTCCCCCGGGGCHHHHHHHSGGGSSGGGHHHHHHHHHHHHH
T ss_pred hCCCCcH-HHHHHHHHHHHHHHHHHHhcccHHHHHHHHhcCCcccCCCccchhHHHHHHHHHHhcchHHHHHHHHHHhhh
Confidence 42 32 3332111 1111122 111 344455443 567788999973
Q ss_pred --------C-c-chHHHHHHHHHHhhC-ChhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHHHh
Q 014196 251 --------K-E-RLSEKSLATLGNLVV-TSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMILA 309 (429)
Q Consensus 251 --------~-~-~~~~~a~~~L~~La~-~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~ 309 (429)
. + .+..-|+.=++.++. .|+||..+.+.|+= ..++++|. +.++.++.+|..++-.+-
T Consensus 408 ~~~~~~~~s~d~~~laVAc~Digefvr~~P~gr~i~~~lg~K-~~VM~Lm~-h~d~~Vr~~AL~avQklm 475 (480)
T 1ho8_A 408 VRNGDVNAKQEKIIIQVALNDITHVVELLPESIDVLDKTGGK-ADIMELLN-HSDSRVKYEALKATQAII 475 (480)
T ss_dssp HHTTCCCSHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHSHH-HHHHHHTS-CSSHHHHHHHHHHHHHHH
T ss_pred ccccccccCCCcceEEeecccHHHHHHHCcchhHHHHHcCcH-HHHHHHhc-CCCHHHHHHHHHHHHHHH
Confidence 1 2 455566667778887 79999988887764 58999998 899999999988877654
No 95
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=96.68 E-value=0.041 Score=53.37 Aligned_cols=246 Identities=11% Similarity=-0.009 Sum_probs=148.9
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHH
Q 014196 72 VLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAI 151 (429)
Q Consensus 72 ~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~ 151 (429)
......++.+++.|...|+-.-..+..+++..++. + =++..|..=+.++++-++-.|+.+|+++...+ --+.
T Consensus 68 ~lf~~v~kl~~s~d~~lKrLvYLyl~~~~~~~~e~---i---Lv~Nsl~kDl~~~N~~iR~lALRtL~~I~~~~--m~~~ 139 (355)
T 3tjz_B 68 EAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDV---I---IVTSSLTKDMTGKEDSYRGPAVRALCQITDST--MLQA 139 (355)
T ss_dssp HHHHHHHGGGGCCCHHHHHHHHHHHHHHTTTSSCG---G---GGHHHHHHHHHSSCHHHHHHHHHHHHHHCCTT--THHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCHHHH---H---HHHHHHHhhcCCCcHhHHHHHHHHHhcCCCHH--HHHH
Confidence 34456677888888888888888888888763331 1 13667788888999999999999999997663 3333
Q ss_pred HHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCCCC
Q 014196 152 MVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVLDN 231 (429)
Q Consensus 152 iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~n 231 (429)
+ .+.+...|.+.++-+|..|+.+...|... .+.+.. +++..+-+++.+.++ .+..+|+.+|+.++.++.
T Consensus 140 l-----~~~lk~~L~d~~pyVRk~A~l~~~kL~~~---~pe~v~-~~~~~l~~ll~d~n~-~V~~~Al~lL~ei~~~d~- 208 (355)
T 3tjz_B 140 I-----ERYMKQAIVDKVPSVSSSALVSSLHLLKC---SFDVVK-RWVNEAQEAASSDNI-MVQYHALGLLYHVRKNDR- 208 (355)
T ss_dssp H-----HHHHHHHHTCSSHHHHHHHHHHHHHHTTT---CHHHHH-TTHHHHHHHTTCSSH-HHHHHHHHHHHHHHTTCH-
T ss_pred H-----HHHHHHHcCCCCHHHHHHHHHHHHHHhcc---CHHHHH-HHHHHHHHHhcCCCc-cHHHHHHHHHHHHHhhch-
Confidence 3 34467788888899999988887777632 233333 688999999988886 678899999999987541
Q ss_pred hhHHHhcCcHHHHHHhccCCcchHHHH-HHHHHHhhC-ChhcHHHHhcCCCChHHHHHhcccCCChhHHHHHHHHHHHHh
Q 014196 232 ARPMVSNGVVHTLLKLCSMKERLSEKS-LATLGNLVV-TSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSAYILMILA 309 (429)
Q Consensus 232 ~~~iv~~G~v~~Lv~lL~~~~~~~~~a-~~~L~~La~-~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~ 309 (429)
.++..|+.-+.+..-.-+.+ +.+|..+.. .++.- -.....+.+.|...|+ +.++.+.-.|+.++..+.
T Consensus 209 -------~a~~kLv~~l~~~~l~~~~~q~~llr~l~~~~~~d~--~~~~~~~~~~l~~~L~-~~~~aVvyEa~k~I~~l~ 278 (355)
T 3tjz_B 209 -------LAVSKMISKFTRHGLKSPFAYCMMIRVASRQLEDED--GSRDSPLFDFIESCLR-NKHEMVVYEAASAIVNLP 278 (355)
T ss_dssp -------HHHHHHHHHHHSSCCSCHHHHHHHHHHHTCC-------------------CCCC-CSSHHHHHHHHHHHTC--
T ss_pred -------HHHHHHHHHHhcCCCcChHHHHHHHHHHHHhccccc--hhhHHHHHHHHHHHHc-CCChHHHHHHHHHHHhcc
Confidence 13445555554421001112 223333333 12110 0011233345666777 788888888888887765
Q ss_pred hCCHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHH
Q 014196 310 HQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFK 351 (429)
Q Consensus 310 ~~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~ 351 (429)
..+.. .. ..++..|..++.+.++.+|-.|...|..+.
T Consensus 279 ~~~~~----~~-~~a~~~L~~fLss~d~niryvaLr~L~~l~ 315 (355)
T 3tjz_B 279 GCSAK----EL-APAVSVLQLFCSSPKAALRYAAVRTLNKVA 315 (355)
T ss_dssp --------------CCCTHHHHHHSSSSSSHHHHHHCC----
T ss_pred CCCHH----HH-HHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Confidence 42211 22 234677778888888888888887555554
No 96
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=96.47 E-value=0.00054 Score=62.98 Aligned_cols=53 Identities=13% Similarity=0.123 Sum_probs=43.5
Q ss_pred CCCCcchhhhhhhhHH--HHHHHHhc-cc---ccc--CCCCCCCcccchhhHHHHHHHHHh
Q 014196 1 MSIPSSSYMRLQFFSR--IRQFIQSK-SA---RRR--QNEPNHNHEKSRTLKNINCQEEKQ 53 (429)
Q Consensus 1 ~~~~~~~~~~~~TydR--Ie~W~~~g-~~---~T~--~~L~~~~L~PN~~Lr~lI~~W~~~ 53 (429)
|..|+++--=|+||+| |++|+..+ .. +|| +++...+|+||+.|+++|+.|..+
T Consensus 191 f~DPVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~~~dL~pN~~L~~lve~~k~r 251 (267)
T 3htk_C 191 YEAPLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVSMRDFVRDPIMELRCKIAKMK 251 (267)
T ss_dssp CSSEEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEECGGGEEECHHHHHHHHHHHHH
T ss_pred ccCCeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCchhhCCcCHHHHHHHHHHHHH
Confidence 5678886455899999 99999764 22 855 888888999999999999999874
No 97
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=96.40 E-value=0.029 Score=52.25 Aligned_cols=184 Identities=15% Similarity=0.216 Sum_probs=115.1
Q ss_pred HHHHhcCCCHHHHHHHHHHHHHHhhhchHH--HH-HHHhcC-cHHHHHHhhcCCCHHHHHHHHHHHHHhccCCC----ch
Q 014196 77 SVKRLHFGSWEEKEMAAKEIEKLAKEDVKI--KK-LMAELG-VIQMLVSMVSTEVIGRRRAAIKALIQLANGTY----TN 148 (429)
Q Consensus 77 lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~--r~-~i~~~G-~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~----~n 148 (429)
+-.+|.+.++..|.+|+..|..+....+.. .. .+...+ .++.+-.++.+.+..+++.++.+|..++.... .+
T Consensus 14 l~e~l~sk~WK~R~eale~l~~~~~~~~~~~~~~~~~~~~~~~~~~lkk~l~DsN~~v~~~al~~l~~~~~~~~~~~~~~ 93 (278)
T 4ffb_C 14 LEERLTYKLWKARLEAYKELNQLFRNSVGDISRDDNIQIYWRDPTLFAQYITDSNVVAQEQAIVALNSLIDAFASSSLKN 93 (278)
T ss_dssp HHHHTTCSSHHHHHHHHHHHHHHHHTC----------CCTTSCTHHHHHHTTCSSHHHHHHHHHHHHHHHTTCC---CCH
T ss_pred HHHhcccCcHHHHHHHHHHHHHHHhhCcccccchhHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhhhccc
Confidence 557899999999999999999876543221 11 111223 34556678888899999999999988764321 11
Q ss_pred H-HHHHhcCccchhhh-hccCCCHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhc
Q 014196 149 K-AIMVEAGILTKLPK-NVDAVDESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLS 226 (429)
Q Consensus 149 k-~~iv~~G~i~~Lv~-lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs 226 (429)
. ....-...+|.|+. ++.+....++..+..++..+......... .++.+...+.+.++ .++..++..|.++-
T Consensus 94 ~~~~~~~~~~l~~lveK~l~~~k~~~~~~a~~~l~~~~~~~~~~~~-----~~e~l~~~l~~Knp-kv~~~~l~~l~~~l 167 (278)
T 4ffb_C 94 AHNITLISTWTPLLVEKGLTSSRATTKTQSMSCILSLCGLDTSITQ-----SVELVIPFFEKKLP-KLIAAAANCVYELM 167 (278)
T ss_dssp HHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTSSSSHH-----HHHHHGGGGGCSCH-HHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhcCcHHH-----HHHHHHHHHhccCH-HHHHHHHHHHHHHH
Confidence 1 11122345665654 46677777888777777766533322121 35666777777777 78888888888765
Q ss_pred cC--CCC--hhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhC
Q 014196 227 AV--LDN--ARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVV 267 (429)
Q Consensus 227 ~~--~~n--~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~ 267 (429)
.. ... ....+ ..+++.+..+|.+.+ .+++.|..++..+-.
T Consensus 168 ~~fg~~~~~~k~~l-~~i~~~l~k~l~d~~~~VR~aA~~l~~~ly~ 212 (278)
T 4ffb_C 168 AAFGLTNVNVQTFL-PELLKHVPQLAGHGDRNVRSQTMNLIVEIYK 212 (278)
T ss_dssp HHHTTTTCCHHHHH-HHHGGGHHHHHTCSSHHHHHHHHHHHHHHHT
T ss_pred HHhCCCcCCchhHH-HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 32 111 11111 134456667778876 888888888877655
No 98
>3oc3_A Helicase MOT1, MOT1; regulation of transcription, hydrolase-transc complex; HET: MES; 3.10A {Encephalitozoon cuniculi}
Probab=96.13 E-value=0.06 Score=54.69 Aligned_cols=240 Identities=15% Similarity=0.082 Sum_probs=146.0
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhc--CcHHHHHHh--hcCC-----C---HHHHHHHHHHHHH
Q 014196 73 LLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAEL--GVIQMLVSM--VSTE-----V---IGRRRAAIKALIQ 140 (429)
Q Consensus 73 ~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~--G~i~~Lv~l--L~s~-----~---~~~~~~A~~aL~n 140 (429)
....|+..|-++.++.|..|+..||.+.+............ ...-.|+.+ |+.. | .-|||.|+.+|+.
T Consensus 175 fcE~L~~DLFdp~WEiRHGAALGLREILR~hG~GAGR~~~~N~DLAvRLLCVLALDRFGDYVSDqVVAPVRETaAQtLGa 254 (800)
T 3oc3_A 175 FFEQISDNLLSYEWYKRHGAFLAFAAMFSEIDNGGDIQIRVDSKLFSKIYEILVTDKFNDFVDDRTVAPVRDAAAYLLSR 254 (800)
T ss_dssp TTHHHHHHTTCSSHHHHHHHHHHHHHHHHHCC----CCCCCCTTHHHHHHHHHHHBCCBBCSSSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcchhhhhHHHHHHHHHHHHhccCCceeccccHHHHHHHHHHHHhccccccccCeeeeehHHHHHHHHHH
Confidence 56788888889999999999999999876543110000111 212222222 2221 2 4689999999999
Q ss_pred hccCCCchHHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccccc-cCCcHHHHHHhhhcCCcHHHHHHHH
Q 014196 141 LANGTYTNKAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPLS-SSEILPFLVGILESGSSVETKELCI 219 (429)
Q Consensus 141 La~~~~~nk~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~-~~g~i~~Lv~lL~~~~~~~~~~~A~ 219 (429)
+ .+-+.. ..++..|+..+.....+++......|..+ +..+. -.+.++.++.-|.+.+. +++..|+
T Consensus 255 L-~hLp~e------~~IL~qLV~~l~~~~WEVRHGGLLGLKYL------~DLL~~Ld~Vv~aVL~GL~D~DD-DVRAVAA 320 (800)
T 3oc3_A 255 I-YPLIGP------NDIIEQLVGFLDSGDWQVQFSGLIALGYL------KEFVEDKDGLCRKLVSLLSSPDE-DIKLLSA 320 (800)
T ss_dssp H-TTTSCS------CCHHHHHTTGGGCSCHHHHHHHHHHHHHT------GGGCCCHHHHHHHHHHHTTCSSH-HHHHHHH
T ss_pred H-HhCChh------HHHHHHHHhhcCCCCeeehhhhHHHHHHH------HHHHHHHHHHHHHHHhhcCCccc-HHHHHHH
Confidence 9 665322 33444444445666688888777777777 12221 24567777777777776 7999999
Q ss_pred HHHHHhccCCCChhHHHhcCcHHHHHHhccCC---cchHHHHHHHHHHhhCChhcHHHHhcCCCChHHHHHhcccCCChh
Q 014196 220 GALYNLSAVLDNARPMVSNGVVHTLLKLCSMK---ERLSEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEILTWEEKPK 296 (429)
Q Consensus 220 ~aL~nLs~~~~n~~~iv~~G~v~~Lv~lL~~~---~~~~~~a~~~L~~La~~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~ 296 (429)
.+|.-++ .++... .++..+-++|.+- +......+..|..|+..+.. .......+|.|...++ +....
T Consensus 321 etLiPIA-~p~~l~-----~LL~iLWd~L~~LDDLSASTgSVMdLLAkL~s~p~~---a~~dp~LVPRL~PFLR-HtITS 390 (800)
T 3oc3_A 321 ELLCHFP-ITDSLD-----LVLEKCWKNIESEELISVSKTSNLSLLTKIYRENPE---LSIPPERLKDIFPCFT-SPVPE 390 (800)
T ss_dssp HHHTTSC-CSSTHH-----HHHHHHHHHHHTCCSCCTTHHHHHHHHHHHHHHCTT---CCCCSGGGGGTGGGGT-CSSHH
T ss_pred HHhhhhc-chhhHH-----HHHHHHHHHhhhhcccchhhHHHHHHHHHHHcCCcc---cccChHHHHHHHhhhc-CCcHH
Confidence 9999888 222221 2233444444432 25566667788888775531 1112244457888888 89999
Q ss_pred HHHHHHHHHHHHhhCCHHHHHHHHhCCchHHH-HHHhhcCCHHHHHHHHHHH
Q 014196 297 CQELSAYILMILAHQSSEQRDKMAKSGIVHVS-LQLALLGSPLAQRRASKLL 347 (429)
Q Consensus 297 ~~e~A~~~L~~L~~~~~~~~~~i~~~G~v~~L-~~ll~~~~~~~k~~A~~lL 347 (429)
+|...+.+|..+. +.. ++..+ ..++...++.+++.+..+.
T Consensus 391 VR~AVL~TL~tfL--~~~---------~LRLIFQNILLE~neeIl~lS~~VW 431 (800)
T 3oc3_A 391 VRTSILNMVKNLS--EES---------IDFLVAEVVLIEEKDEIREMAIKLL 431 (800)
T ss_dssp HHHHHHHHTTTCC--CHH---------HHHHHHHHHHHCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--hhh---------HHHHHHHHHHhCCcHHHHHHHHHHH
Confidence 9998888887665 111 22222 2355566777776666544
No 99
>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans}
Probab=95.75 E-value=0.52 Score=43.56 Aligned_cols=196 Identities=10% Similarity=0.111 Sum_probs=119.1
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcC-cHHHHHHhhcCCCHHHHHHHHHHHHHhc----cCCCchHH
Q 014196 76 KSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELG-VIQMLVSMVSTEVIGRRRAAIKALIQLA----NGTYTNKA 150 (429)
Q Consensus 76 ~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G-~i~~Lv~lL~s~~~~~~~~A~~aL~nLa----~~~~~nk~ 150 (429)
.+...|-+.+...+.+|+..|......+++ ..+...+ .++.+.--+.+.++.+...++.+|..+. ..+.....
T Consensus 50 ~~~~~lfs~d~k~~~~ale~L~~~l~~~~~--~~~~~lDll~kw~~lr~~d~N~~v~~~~L~~L~~l~~~l~~~~y~~~~ 127 (266)
T 2of3_A 50 SLMSQLFHKDFKQHLAALDSLVRLADTSPR--SLLSNSDLLLKWCTLRFFETNPAALIKVLELCKVIVELIRDTETPMSQ 127 (266)
T ss_dssp HHHHHHTCSCHHHHHHHHHHHHHHHHHCHH--HHHHTHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCCH
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHhhhChH--HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhccccchH
Confidence 445666677888888888888886654432 2232222 2333333445678888888887776653 21111111
Q ss_pred HHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhcc-CC
Q 014196 151 IMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSA-VL 229 (429)
Q Consensus 151 ~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~-~~ 229 (429)
.-+ .-.+|.|+.-+.......|+.+-.++..+.... .-....+.++.-+.+.+. ..+..++..+.++-. +.
T Consensus 128 ~ea-~~~lP~LveKlGd~k~~vR~~~r~il~~l~~v~------~~~~v~~~l~~g~ksKN~-R~R~e~l~~l~~li~~~G 199 (266)
T 2of3_A 128 EEV-SAFVPYLLLKTGEAKDNMRTSVRDIVNVLSDVV------GPLKMTPMLLDALKSKNA-RQRSECLLVIEYYITNAG 199 (266)
T ss_dssp HHH-HHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHH------CHHHHHHHHHHGGGCSCH-HHHHHHHHHHHHHHHHHC
T ss_pred HHH-HHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHccCCH-HHHHHHHHHHHHHHHhcC
Confidence 111 125677777777777777777766666665321 112346778887888876 788888888877653 22
Q ss_pred CChhHHHhcCcH---HHHHHhccCCc-chHHHHHHHHHHhhC--ChhcHHHHhcCCCChHHHHHhc
Q 014196 230 DNARPMVSNGVV---HTLLKLCSMKE-RLSEKSLATLGNLVV--TSTGKKAMEDSPLVPESLIEIL 289 (429)
Q Consensus 230 ~n~~~iv~~G~v---~~Lv~lL~~~~-~~~~~a~~~L~~La~--~~e~~~~i~~~~~i~~~Lv~~L 289 (429)
-. ...++ |.+..++.|++ .++..|+.++..+-. .+..++.+ |.+++.-.+++
T Consensus 200 ~~-----~~~~l~~~~~ia~ll~D~d~~VR~aAl~~lve~y~~~Gd~v~k~l---g~L~~~~~~~l 257 (266)
T 2of3_A 200 IS-----PLKSLSVEKTVAPFVGDKDVNVRNAAINVLVACFKFEGDQMWKAA---GRMADKDKSLV 257 (266)
T ss_dssp SG-----GGGGGCHHHHHGGGGGCSSHHHHHHHHHHHHHHHHHHTTHHHHHH---CCCCHHHHHHH
T ss_pred CC-----ccccccchHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhHHHHHHH---hcCCHHHHHHH
Confidence 22 23478 99999999987 888888888875543 23333333 33554444444
No 100
>1lrv_A LRV, leucine-rich repeat variant; leucine-rich repeats, repetitive structure, iron sulfur proteins, nitrogen fixation; 2.60A {Azotobacter vinelandii} SCOP: a.118.1.5
Probab=95.35 E-value=0.027 Score=51.64 Aligned_cols=31 Identities=16% Similarity=0.090 Sum_probs=18.2
Q ss_pred hhhHH-HHHHHHhccccccCCCCCCCcccchhhHHH
Q 014196 12 QFFSR-IRQFIQSKSARRRQNEPNHNHEKSRTLKNI 46 (429)
Q Consensus 12 ~TydR-Ie~W~~~g~~~T~~~L~~~~L~PN~~Lr~l 46 (429)
-+|.| |+++|........+-+.+ |+-..|..
T Consensus 38 ~~~~~ri~~~~~~~p~l~~~ll~d----~~~~VR~~ 69 (244)
T 1lrv_A 38 VESGRQIDRFFRNNPHLAVQYLAD----PFWERRAI 69 (244)
T ss_dssp SSCHHHHHHHHHHCGGGGGGGTTC----SSHHHHHH
T ss_pred cCcHHHHHHHHcCCHHHHHHHhcC----CCHHHHHH
Confidence 57888 999996643333344444 55554443
No 101
>2fv2_A RCD1 required for cell differentiation1 homolog; armadillo-repeat, transcription; 2.20A {Homo sapiens}
Probab=94.95 E-value=1.3 Score=40.45 Aligned_cols=199 Identities=17% Similarity=0.175 Sum_probs=122.8
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHh-cCcHHHHHH-------hhcCCC-----HHHHHHHHHHHHH
Q 014196 74 LQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAE-LGVIQMLVS-------MVSTEV-----IGRRRAAIKALIQ 140 (429)
Q Consensus 74 l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~-~G~i~~Lv~-------lL~s~~-----~~~~~~A~~aL~n 140 (429)
+..++..|..+ +.+..|+.+|..--..-++..-.+=. .|.+..|++ .|..+. ..-..+|+..|..
T Consensus 5 i~qli~~L~~p--~~Re~AL~eLsk~Re~~~~La~~LW~S~Gtia~LLQEIisiYp~lspp~Lt~~~SnRVcnaLaLlQc 82 (268)
T 2fv2_A 5 IYQWINELSSP--ETRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQC 82 (268)
T ss_dssp HHHHHHHTSST--TTHHHHHHHHHHHTTTCTTHHHHHHHSTTHHHHHHHHHHHTGGGBTTBCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCc--hhHHHHHHHHHHhhhccccHHHHHHhccCHHHHHHHHHHHHcccCCCcccCHHHHhHHHHHHHHHHH
Confidence 45556656553 34556665555432222333333433 466666644 232222 2234567777888
Q ss_pred hccCCCchHHHHHhcCccchhhhhccCCC-----HHHHHHHHHHHHHhhccCCCccccc---cCCcHHHHHHhhhcCCcH
Q 014196 141 LANGTYTNKAIMVEAGILTKLPKNVDAVD-----ESTRHEFGELLLSLSSLANTHIPLS---SSEILPFLVGILESGSSV 212 (429)
Q Consensus 141 La~~~~~nk~~iv~~G~i~~Lv~lL~~~~-----~~~~~~aa~~L~~Ls~~~~~~~~i~---~~g~i~~Lv~lL~~~~~~ 212 (429)
+|.|+ +.|..+.++...-.|-..|+..+ .-.|-.+.+++..|...++ ...|. +.+.||..++.++.|+.
T Consensus 83 vAshp-etr~~Fl~a~iplyLyPfL~t~sk~r~fE~LRLtsLGVIgaLvK~dd-~eVi~fLL~tEiiplCLrime~Gse- 159 (268)
T 2fv2_A 83 VASHP-ETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDE-QEVINFLLTTEIIPLCLRIMESGSE- 159 (268)
T ss_dssp HHHCT-TTHHHHHHTTGGGGTHHHHHCCCCSHHHHHHHHHHHHHHHHHGGGCC-HHHHHHHHHTTHHHHHHHHHHHSCH-
T ss_pred HHcCc-chhhHHHHccchHHhhhhhccccCCCcchhhhhhHHHHHHHHhccCc-HHHHHHHHhhhHHHHHHHHHhhccH-
Confidence 89887 58999999988766777776544 2345556678888886543 33333 68899999999999997
Q ss_pred HHHHHHHHHHHHhccCCCChhHHHhc-C-------cHHHHHHhc-cCCc-chHHHHHHHHHHhhCChhcHHHHhc
Q 014196 213 ETKELCIGALYNLSAVLDNARPMVSN-G-------VVHTLLKLC-SMKE-RLSEKSLATLGNLVVTSTGKKAMED 277 (429)
Q Consensus 213 ~~~~~A~~aL~nLs~~~~n~~~iv~~-G-------~v~~Lv~lL-~~~~-~~~~~a~~~L~~La~~~e~~~~i~~ 277 (429)
-.|.-|.-.+..+-.++.....+... + ++..++.-+ .+++ .+.++.+.+-..|+.++..|.++.+
T Consensus 160 lSKtvAtfIlqKIL~dd~GL~YiC~t~eRF~av~~vL~~mV~~l~~~ps~RLLKhiircYlRLsdn~rar~aL~~ 234 (268)
T 2fv2_A 160 LSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQ 234 (268)
T ss_dssp HHHHHHHHHHHHHHHSHHHHHHHTSSHHHHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccchhHHHHHccHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 56777777777776655544444331 2 222233322 2344 7778888887888888888887765
No 102
>1lrv_A LRV, leucine-rich repeat variant; leucine-rich repeats, repetitive structure, iron sulfur proteins, nitrogen fixation; 2.60A {Azotobacter vinelandii} SCOP: a.118.1.5
Probab=94.76 E-value=0.046 Score=50.14 Aligned_cols=80 Identities=19% Similarity=0.172 Sum_probs=48.4
Q ss_pred hcCCCHHHHHHHHHH-----HHHHhh-hchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHHHHh
Q 014196 81 LHFGSWEEKEMAAKE-----IEKLAK-EDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVE 154 (429)
Q Consensus 81 L~~~~~~~~~~Aa~~-----L~~La~-~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~iv~ 154 (429)
+.++++.++..|+.. +..++. .++..|...++.-..+.|..++.+++..++..++..| .
T Consensus 59 l~d~~~~VR~~AA~~l~~~~l~~L~~D~~~~VR~~aA~~L~~~~L~~ll~D~d~~VR~~aA~~l---~------------ 123 (244)
T 1lrv_A 59 LADPFWERRAIAVRYSPVEALTPLIRDSDEVVRRAVAYRLPREQLSALMFDEDREVRITVADRL---P------------ 123 (244)
T ss_dssp TTCSSHHHHHHHHTTSCGGGGGGGTTCSSHHHHHHHHTTSCSGGGGGTTTCSCHHHHHHHHHHS---C------------
T ss_pred hcCCCHHHHHHHHHhCCHHHHHHHccCcCHHHHHHHHHHCCHHHHHHHHcCCCHHHHHHHHHhC---C------------
Confidence 356677788777743 233332 3445666666544446777777888888887776632 1
Q ss_pred cCccchhhhhccCCCHHHHHHHHH
Q 014196 155 AGILTKLPKNVDAVDESTRHEFGE 178 (429)
Q Consensus 155 ~G~i~~Lv~lL~~~~~~~~~~aa~ 178 (429)
.+.|..+++..+..+|..++.
T Consensus 124 ---~~~L~~L~~D~d~~VR~~aA~ 144 (244)
T 1lrv_A 124 ---LEQLEQMAADRDYLVRAYVVQ 144 (244)
T ss_dssp ---TGGGGGGTTCSSHHHHHHHHH
T ss_pred ---HHHHHHHHcCCCHHHHHHHHH
Confidence 123455566666777766665
No 103
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=94.20 E-value=0.68 Score=50.78 Aligned_cols=253 Identities=9% Similarity=0.096 Sum_probs=131.8
Q ss_pred HHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhc------CCCHHHHHHHHHHHHHhccCCCchHHHHHh----cCc
Q 014196 88 EKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVS------TEVIGRRRAAIKALIQLANGTYTNKAIMVE----AGI 157 (429)
Q Consensus 88 ~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~------s~~~~~~~~A~~aL~nLa~~~~~nk~~iv~----~G~ 157 (429)
.+..|...|..++...+ ..+.. -.++.+-.++. +.+...+++|+.+++.++.+.......+.. ...
T Consensus 377 ~R~aa~~~L~~l~~~~~---~~v~~-~~l~~i~~~l~~~~~~~~~~w~~reaal~algaia~~~~~~~~~~~~~~~~~~l 452 (960)
T 1wa5_C 377 RRRACTDFLKELKEKNE---VLVTN-IFLAHMKGFVDQYMSDPSKNWKFKDLYIYLFTALAINGNITNAGVSSTNNLLNV 452 (960)
T ss_dssp HHHHHHHHHHHHHHHCH---HHHHH-HHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHBSSCCBTTBCCCBCTTCCH
T ss_pred cHHHHHHHHHHHHHHcc---hhHHH-HHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHhccccCCcccccccccH
Confidence 45566777777776542 12211 12334444454 456678999999999997542100000000 011
Q ss_pred cch----hhhhccCC---CHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCCC
Q 014196 158 LTK----LPKNVDAV---DESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVLD 230 (429)
Q Consensus 158 i~~----Lv~lL~~~---~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~ 230 (429)
.+. ++..++++ .+-+|..++++|..++..- . ... -...++.+++.|.+.+. .++..|+.||.+++....
T Consensus 453 ~~~l~~~v~p~l~~~~~~~p~vr~~a~~~lg~~~~~~-~-~~~-l~~~l~~l~~~L~d~~~-~V~~~A~~Al~~~~~~~~ 528 (960)
T 1wa5_C 453 VDFFTKEIAPDLTSNNIPHIILRVDAIKYIYTFRNQL-T-KAQ-LIELMPILATFLQTDEY-VVYTYAAITIEKILTIRE 528 (960)
T ss_dssp HHHHHHHTHHHHHCSSCSCHHHHHHHHHHHHHTGGGS-C-HHH-HHHHHHHHHHHTTCSCH-HHHHHHHHHHHHHTTCBS
T ss_pred HHHHHHHhHHHhcCCCCCCceehHHHHHHHHHHHhhC-C-HHH-HHHHHHHHHHHhCCCCh-hHHHHHHHHHHHHHhccc
Confidence 111 22234444 5777888888988887542 1 111 23457778888877665 789999999999987422
Q ss_pred ---------ChhHHHh--cCcHHHHHHhccCC----c--chHHHHHHHHHHhhCC--hhcHHHHhcCCCChHHHHHhccc
Q 014196 231 ---------NARPMVS--NGVVHTLLKLCSMK----E--RLSEKSLATLGNLVVT--STGKKAMEDSPLVPESLIEILTW 291 (429)
Q Consensus 231 ---------n~~~iv~--~G~v~~Lv~lL~~~----~--~~~~~a~~~L~~La~~--~e~~~~i~~~~~i~~~Lv~~L~~ 291 (429)
.+..+.. ...++.|+.++... . ...+.++.+|..++.. ++....+. .+.+.|+..+..
T Consensus 529 ~~~~~~~~~~~~~l~p~l~~ll~~L~~ll~~~~~~~~~~~~~e~l~~al~~vv~~~~~~~~p~~~---~l~~~L~~~l~~ 605 (960)
T 1wa5_C 529 SNTSPAFIFHKEDISNSTEILLKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTSEDSIQPLFP---QLLAQFIEIVTI 605 (960)
T ss_dssp CSSSCCBSSCGGGTTTTHHHHHHHHHHHHHTTCCCHHHHTSCHHHHHHHHHHHHHHTTTTGGGHH---HHHHHHHHHHHH
T ss_pred ccccccccccHHHhhhhHHHHHHHHHHHHHhccCCCCcccccHHHHHHHHHHHHHHHHhhhhHHH---HHHHHHHHHHHH
Confidence 1222221 23445555565543 0 1335566666655431 11111110 011234443321
Q ss_pred ----CCChhHHHHHHHHHHHHhhC-CHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHh
Q 014196 292 ----EEKPKCQELSAYILMILAHQ-SSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKD 352 (429)
Q Consensus 292 ----~~s~~~~e~A~~~L~~L~~~-~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~ 352 (429)
..++.....+..+|..++.. +++....+ ...++|.+..++..........+..++..+-.
T Consensus 606 ~~~~~~~~~~~~~~~e~l~~l~~~~~~~~~~~~-~~~~~p~~~~iL~~~~~~~~~~~~~i~~~l~~ 670 (960)
T 1wa5_C 606 MAKNPSNPRFTHYTFESIGAILNYTQRQNLPLL-VDSMMPTFLTVFSEDIQEFIPYVFQIIAFVVE 670 (960)
T ss_dssp HTTSCCCHHHHHHHHHHHHHHHHTSCGGGHHHH-HHHHHHHHHHHHHTTCTTTHHHHHHHHHHHHH
T ss_pred HHhCCCCcHHHHHHHHHHHHHHhcCCcchHHHH-HHHHHHHHHHHHHhhhHhhHHHHHHHHHHHHH
Confidence 23445555677777777664 33333222 33467888888887655555556666555544
No 104
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=93.37 E-value=0.053 Score=41.40 Aligned_cols=52 Identities=10% Similarity=0.005 Sum_probs=39.2
Q ss_pred CCcchhhhhhhhHH--HHHHHHhcc--c--cccCCC-CCCCcccchhhHHHHHHHHHhh
Q 014196 3 IPSSSYMRLQFFSR--IRQFIQSKS--A--RRRQNE-PNHNHEKSRTLKNINCQEEKQV 54 (429)
Q Consensus 3 ~~~~~~~~~~TydR--Ie~W~~~g~--~--~T~~~L-~~~~L~PN~~Lr~lI~~W~~~~ 54 (429)
.|++---=|+||-+ |++|+.... . ..++++ ....+.||..|+++|+.|...+
T Consensus 25 ~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~~~~~n~~l~~~i~~~~~~~ 83 (92)
T 3ztg_A 25 DAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPDALIANKFLRQAVNNFKNET 83 (92)
T ss_dssp SCEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSSCCTTSCEECHHHHHHHHHHHHHH
T ss_pred CceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcCCCccccCcCHHHHHHHHHHHHHH
Confidence 45443113899999 999997543 2 777776 4458999999999999999866
No 105
>2fv2_A RCD1 required for cell differentiation1 homolog; armadillo-repeat, transcription; 2.20A {Homo sapiens}
Probab=93.21 E-value=0.64 Score=42.45 Aligned_cols=98 Identities=19% Similarity=0.137 Sum_probs=77.6
Q ss_pred hHHHHHHHHHHhhCChhcHHHHhcCCCChHHHHHhcccCCC----hhHHHHHHHHHHHHhh-CCHHHHHHHHhCCchHHH
Q 014196 254 LSEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEILTWEEK----PKCQELSAYILMILAH-QSSEQRDKMAKSGIVHVS 328 (429)
Q Consensus 254 ~~~~a~~~L~~La~~~e~~~~i~~~~~i~~~Lv~~L~~~~s----~~~~e~A~~~L~~L~~-~~~~~~~~i~~~G~v~~L 328 (429)
-+.+|++.|.-+|.+|+.|..+.++. +|--|-.+|+.... +..+-.+.++++.+.. .++++..-+.+.+++|..
T Consensus 72 RVcnaLaLlQcvAshpetr~~Fl~a~-iplyLyPfL~t~sk~r~fE~LRLtsLGVIgaLvK~dd~eVi~fLL~tEiiplC 150 (268)
T 2fv2_A 72 RVCNALALLQCVASHPETRSAFLAAH-IPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLC 150 (268)
T ss_dssp HHHHHHHHHHHHHHCTTTHHHHHHTT-GGGGTHHHHHCCCCSHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHHcCcchhhHHHHcc-chHHhhhhhccccCCCcchhhhhhHHHHHHHHhccCcHHHHHHHHhhhHHHHH
Confidence 45678888889999999999999964 44467777763222 2346677888888776 467888888999999999
Q ss_pred HHHhhcCCHHHHHHHHHHHHHHHh
Q 014196 329 LQLALLGSPLAQRRASKLLQWFKD 352 (429)
Q Consensus 329 ~~ll~~~~~~~k~~A~~lL~~l~~ 352 (429)
+..++.|++..|.-|..+++.+=.
T Consensus 151 Lrime~GselSKtvAtfIlqKIL~ 174 (268)
T 2fv2_A 151 LRIMESGSELSKTVATFILQKILL 174 (268)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred HHHHhhccHHHHHHHHHHHHHHhc
Confidence 999999999999999998876653
No 106
>3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A
Probab=93.15 E-value=4 Score=40.71 Aligned_cols=183 Identities=21% Similarity=0.173 Sum_probs=110.9
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHHH
Q 014196 73 LLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIM 152 (429)
Q Consensus 73 ~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~i 152 (429)
....++.. ..++...|+-|+..|....++-|+..... |..++++.+++|..+|..|+..|..+|.+ ++-..|
T Consensus 30 ~y~~Il~~-~kg~~k~K~LaaQ~I~kffk~FP~l~~~A-----i~a~lDLcEDed~~IR~qaik~Lp~~ck~--~~i~ki 101 (507)
T 3u0r_A 30 AYQVILDG-VKGGTKEKRLAAQFIPKFFKHFPELADSA-----INAQLDLCEDEDVSIRRQAIKELPQFATG--ENLPRV 101 (507)
T ss_dssp HHHHHHHG-GGSCHHHHHHHHHHHHHHGGGCGGGHHHH-----HHHHHHHHTCSSHHHHHHHHHHGGGGCCT--TCHHHH
T ss_pred HHHHHHHh-cCCCHHHHHHHHHHHHHHHhhChhhHHHH-----HHHHHHHHhcccHHHHHHHHHhhHHHhhh--hhhhhH
Confidence 34445543 45578999999999999999988876653 77899999999999999999999999988 354444
Q ss_pred HhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhc-cCCCC
Q 014196 153 VEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLS-AVLDN 231 (429)
Q Consensus 153 v~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs-~~~~n 231 (429)
++ .|+++|+..+.......-.+|..|-..+. .+.+..|..-+.+++. .+++.++.-|..=- .-+.+
T Consensus 102 aD-----vL~QlLqtdd~~E~~~V~~sL~sllk~Dp-------k~tl~~lf~~i~~~~e-~~Rer~lkFi~~kl~~l~~~ 168 (507)
T 3u0r_A 102 AD-----ILTQLLQTDDSAEFNLVNNALLSIFKMDA-------KGTLGGLFSQILQGED-IVRERAIKFLSTKLKTLPDE 168 (507)
T ss_dssp HH-----HHHHHTTCCCHHHHHHHHHHHHHHHHHCH-------HHHHHHHHHHHHHSCH-HHHHHHHHHHHHHGGGSCTT
T ss_pred HH-----HHHHHHhccchHHHHHHHHHHHHHHhcCh-------HHHHHHHHHHHcccch-HHHHHHHHHHHHHHhhcchh
Confidence 43 47899987665444444445555543321 1234455555555654 67877776665322 22222
Q ss_pred -hhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHH--hhCChhcHHHHh
Q 014196 232 -ARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGN--LVVTSTGKKAME 276 (429)
Q Consensus 232 -~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~--La~~~e~~~~i~ 276 (429)
...=++.-++..+..+|.|-. .--...+.+|.. +..++.+++.++
T Consensus 169 ~l~~E~E~~i~~~ikK~L~DVT~~EF~L~m~lL~~lkl~~t~~g~qeLv 217 (507)
T 3u0r_A 169 VLTKEVEELILTESKKVLEDVTGEEFVLFMKILSGLKSLQTVSGRQQLV 217 (507)
T ss_dssp TSCHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHTSGGGSSHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcccccCchHHHHHH
Confidence 223333344455555565432 222334444432 223444554443
No 107
>3oc3_A Helicase MOT1, MOT1; regulation of transcription, hydrolase-transc complex; HET: MES; 3.10A {Encephalitozoon cuniculi}
Probab=92.05 E-value=0.32 Score=49.46 Aligned_cols=211 Identities=14% Similarity=0.086 Sum_probs=125.3
Q ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHHHHhcCccchhhhhcc------CCC-------HHHHHHHHHHHHH
Q 014196 116 IQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVD------AVD-------ESTRHEFGELLLS 182 (429)
Q Consensus 116 i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~iv~~G~i~~Lv~lL~------~~~-------~~~~~~aa~~L~~ 182 (429)
.+.|+.-|-++.-++|..|+.+|+.+................ +..++++. .++ ..+|+.+|-+|..
T Consensus 176 cE~L~~DLFdp~WEiRHGAALGLREILR~hG~GAGR~~~~N~-DLAvRLLCVLALDRFGDYVSDqVVAPVRETaAQtLGa 254 (800)
T 3oc3_A 176 FEQISDNLLSYEWYKRHGAFLAFAAMFSEIDNGGDIQIRVDS-KLFSKIYEILVTDKFNDFVDDRTVAPVRDAAAYLLSR 254 (800)
T ss_dssp THHHHHHTTCSSHHHHHHHHHHHHHHHHHCC----CCCCCCT-THHHHHHHHHHHBCCBBCSSSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCcchhhhhHHHHHHHHHHHHhccCCceeccccH-HHHHHHHHHHHhccccccccCeeeeehHHHHHHHHHH
Confidence 456777778888999999999999986443110000000111 22333321 111 4578888888888
Q ss_pred hhccCCCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCCCChhHHHhcCcHHHHHHhccCCc-chHHHHHHH
Q 014196 183 LSSLANTHIPLSSSEILPFLVGILESGSSVETKELCIGALYNLSAVLDNARPMVSNGVVHTLLKLCSMKE-RLSEKSLAT 261 (429)
Q Consensus 183 Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~ 261 (429)
+ ..-+.. ..++..|+..+.... .+++..++-.|.++.. -... =.++++.++..|.|.+ +++.-|+++
T Consensus 255 L-~hLp~e-----~~IL~qLV~~l~~~~-WEVRHGGLLGLKYL~D---LL~~--Ld~Vv~aVL~GL~D~DDDVRAVAAet 322 (800)
T 3oc3_A 255 I-YPLIGP-----NDIIEQLVGFLDSGD-WQVQFSGLIALGYLKE---FVED--KDGLCRKLVSLLSSPDEDIKLLSAEL 322 (800)
T ss_dssp H-TTTSCS-----CCHHHHHTTGGGCSC-HHHHHHHHHHHHHTGG---GCCC--HHHHHHHHHHHTTCSSHHHHHHHHHH
T ss_pred H-HhCChh-----HHHHHHHHhhcCCCC-eeehhhhHHHHHHHHH---HHHH--HHHHHHHHHhhcCCcccHHHHHHHHH
Confidence 7 432222 344555555444444 4899999999999911 1111 1467888888898886 899999999
Q ss_pred HHHhhCChhcHHHHhcCCCChHHHHHhcccC-CChhHHHHHHHHHHHHhhCCHHHHHHHHhCCchHHHHHHhhcCCHHHH
Q 014196 262 LGNLVVTSTGKKAMEDSPLVPESLIEILTWE-EKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQ 340 (429)
Q Consensus 262 L~~La~~~e~~~~i~~~~~i~~~Lv~~L~~~-~s~~~~e~A~~~L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k 340 (429)
|.-++ .++.-..+.+ .+.+.|... +-..........|..||..... .-.....+|.|.-.+...-..+|
T Consensus 323 LiPIA-~p~~l~~LL~------iLWd~L~~LDDLSASTgSVMdLLAkL~s~p~~---a~~dp~LVPRL~PFLRHtITSVR 392 (800)
T 3oc3_A 323 LCHFP-ITDSLDLVLE------KCWKNIESEELISVSKTSNLSLLTKIYRENPE---LSIPPERLKDIFPCFTSPVPEVR 392 (800)
T ss_dssp HTTSC-CSSTHHHHHH------HHHHHHHTCCSCCTTHHHHHHHHHHHHHHCTT---CCCCSGGGGGTGGGGTCSSHHHH
T ss_pred hhhhc-chhhHHHHHH------HHHHHhhhhcccchhhHHHHHHHHHHHcCCcc---cccChHHHHHHHhhhcCCcHHHH
Confidence 98887 3333333332 455555421 1112233445566677765421 11123678888888888888888
Q ss_pred HHHHHHHHH
Q 014196 341 RRASKLLQW 349 (429)
Q Consensus 341 ~~A~~lL~~ 349 (429)
..+..+|..
T Consensus 393 ~AVL~TL~t 401 (800)
T 3oc3_A 393 TSILNMVKN 401 (800)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHHHHH
Confidence 877766543
No 108
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=91.77 E-value=2.7 Score=38.52 Aligned_cols=187 Identities=14% Similarity=0.034 Sum_probs=108.8
Q ss_pred CccchhhhhccCCCHHHHHHHHHHHHHhhccCC---Cccc-cc-cCCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCCC
Q 014196 156 GILTKLPKNVDAVDESTRHEFGELLLSLSSLAN---THIP-LS-SSEILPFLVGILESGSSVETKELCIGALYNLSAVLD 230 (429)
Q Consensus 156 G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~---~~~~-i~-~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~ 230 (429)
.-+| |-.-|.+.....|.++...|..+-.... .... +. -...++.+-+.+.+.+. .+...++.+|..++..-.
T Consensus 10 sklp-l~e~l~sk~WK~R~eale~l~~~~~~~~~~~~~~~~~~~~~~~~~~lkk~l~DsN~-~v~~~al~~l~~~~~~~~ 87 (278)
T 4ffb_C 10 TTLP-LEERLTYKLWKARLEAYKELNQLFRNSVGDISRDDNIQIYWRDPTLFAQYITDSNV-VAQEQAIVALNSLIDAFA 87 (278)
T ss_dssp -CCC-HHHHTTCSSHHHHHHHHHHHHHHHHTC----------CCTTSCTHHHHHHTTCSSH-HHHHHHHHHHHHHHTTCC
T ss_pred hcCC-HHHhcccCcHHHHHHHHHHHHHHHhhCcccccchhHHHHHHHHHHHHHHHhccchH-HHHHHHHHHHHHHHHHhh
Confidence 3455 4455667778888888776655432211 1111 11 12345566677776666 688888888888765311
Q ss_pred ---C-h--hHHHhcCcHHHHHH-hccCCc-chHHHHHHHHHHhhCChhcHHHHhcCCCChHHHHHhcccCCChhHHHHHH
Q 014196 231 ---N-A--RPMVSNGVVHTLLK-LCSMKE-RLSEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEILTWEEKPKCQELSA 302 (429)
Q Consensus 231 ---n-~--~~iv~~G~v~~Lv~-lL~~~~-~~~~~a~~~L~~La~~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~A~ 302 (429)
. . ....-...+|.|++ .|.+.. .+++.+..+|..++........+. ..++..+. +.++..+..++
T Consensus 88 ~~~~~~~~~~~~~~~~l~~lveK~l~~~k~~~~~~a~~~l~~~~~~~~~~~~~~------e~l~~~l~-~Knpkv~~~~l 160 (278)
T 4ffb_C 88 SSSLKNAHNITLISTWTPLLVEKGLTSSRATTKTQSMSCILSLCGLDTSITQSV------ELVIPFFE-KKLPKLIAAAA 160 (278)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTSSSSHHHH------HHHGGGGG-CSCHHHHHHHH
T ss_pred hhhcccchhHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhcCcHHHHH------HHHHHHHh-ccCHHHHHHHH
Confidence 1 1 12223466788886 476654 677888887776654221112221 24555666 68899988888
Q ss_pred HHHHHHhh-CCHH--HHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHh
Q 014196 303 YILMILAH-QSSE--QRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKD 352 (429)
Q Consensus 303 ~~L~~L~~-~~~~--~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~ 352 (429)
..|..+-. +... .....+. .+++.+..++.+.++.+|..|..++.-+..
T Consensus 161 ~~l~~~l~~fg~~~~~~k~~l~-~i~~~l~k~l~d~~~~VR~aA~~l~~~ly~ 212 (278)
T 4ffb_C 161 NCVYELMAAFGLTNVNVQTFLP-ELLKHVPQLAGHGDRNVRSQTMNLIVEIYK 212 (278)
T ss_dssp HHHHHHHHHHTTTTCCHHHHHH-HHGGGHHHHHTCSSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCcCCchhHHH-HHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 88876543 1111 0111111 245567777888899999999987766654
No 109
>3ebb_A Phospholipase A2-activating protein; armadillo repeat, structural genomics consortium, SGC, WD repeat, acetylation, ATP-binding; 1.90A {Homo sapiens}
Probab=91.39 E-value=2.6 Score=39.64 Aligned_cols=163 Identities=13% Similarity=0.086 Sum_probs=93.9
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHH----HhhcC-CCHHHHHHHHHHHHHhccCCCc
Q 014196 73 LLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLV----SMVST-EVIGRRRAAIKALIQLANGTYT 147 (429)
Q Consensus 73 ~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv----~lL~s-~~~~~~~~A~~aL~nLa~~~~~ 147 (429)
.+..+.+.++ =..+.+.-++..+|.++. ++.....+.+.+.-..++ ..+.+ ..+..+.-++.++.|+-.+. .
T Consensus 104 ~l~~l~kil~-WP~~~~fPvLDLlRl~~l-~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~p~n~ml~lR~l~NlF~~~-~ 180 (304)
T 3ebb_A 104 QLQILWKAIN-CPEDIVFPALDILRLSIK-HPSVNENFCNEKEGAQFSSHLINLLNPKGKPANQLLALRTFCNCFVGQ-A 180 (304)
T ss_dssp HHHHHHHHHT-SCTTTCHHHHHHHHHHTT-SHHHHHHHHSTTTHHHHHHHHHHTTCTTSCHHHHHHHHHHHHHGGGSH-H
T ss_pred HHHHHHHHHc-CCHHhHHHHHHHHHHHHc-CccHHHHhhccccchHHHHHHHHhcCCCCChHHHHHHHHHHHHccCCc-h
Confidence 3444445442 223445566777776665 455555665543333333 33332 34666888999999998886 5
Q ss_pred hHHHHHhc--CccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccccc-cCCcHHHHHHhhhcCCcHHHHHHHHHHHHH
Q 014196 148 NKAIMVEA--GILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPLS-SSEILPFLVGILESGSSVETKELCIGALYN 224 (429)
Q Consensus 148 nk~~iv~~--G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~-~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~n 224 (429)
.+..+... ..++.+..++...+...+..++.+++|++........+. ....+..+..++......++...++.||.+
T Consensus 181 g~~~l~~~~~~il~~~~~~~~~~nknl~iA~ATl~~NlAv~~~~~~~~~~~~~ll~~l~~il~~~~d~EalyR~LvALGt 260 (304)
T 3ebb_A 181 GQKLMMSQRESLMSHAIELKSGSNKNIHIALATLALNYSVCFHKDHNIEGKAQCLSLISTILEVVQDLEATFRLLVALGT 260 (304)
T ss_dssp HHHHHHHTHHHHHHHHHGGGSSCCHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Confidence 77777642 244445555444556677777889999986531111111 111344455555544334677789999999
Q ss_pred hccCCCChhHHHhc
Q 014196 225 LSAVLDNARPMVSN 238 (429)
Q Consensus 225 Ls~~~~n~~~iv~~ 238 (429)
|...+.....+.+.
T Consensus 261 L~~~~~~~~~lak~ 274 (304)
T 3ebb_A 261 LISDDSNAVQLAKS 274 (304)
T ss_dssp HHTTCHHHHHHHHH
T ss_pred HHhCChhHHHHHHH
Confidence 98765544444443
No 110
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=91.26 E-value=1.3 Score=48.57 Aligned_cols=185 Identities=11% Similarity=0.087 Sum_probs=106.7
Q ss_pred HHHHHhcCC---CHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCC------
Q 014196 76 KSVKRLHFG---SWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTY------ 146 (429)
Q Consensus 76 ~lv~~L~~~---~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~------ 146 (429)
.++..|.++ ++..|..|++.|..++..- ....+ ..+++.++..|.++++.++.+|+++|.+++...+
T Consensus 459 ~v~p~l~~~~~~~p~vr~~a~~~lg~~~~~~--~~~~l--~~~l~~l~~~L~d~~~~V~~~A~~Al~~~~~~~~~~~~~~ 534 (960)
T 1wa5_C 459 EIAPDLTSNNIPHIILRVDAIKYIYTFRNQL--TKAQL--IELMPILATFLQTDEYVVYTYAAITIEKILTIRESNTSPA 534 (960)
T ss_dssp HTHHHHHCSSCSCHHHHHHHHHHHHHTGGGS--CHHHH--HHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTCBSCSSSCC
T ss_pred HhHHHhcCCCCCCceehHHHHHHHHHHHhhC--CHHHH--HHHHHHHHHHhCCCChhHHHHHHHHHHHHHhccccccccc
Confidence 345556666 7899999999999998642 12222 2357888999988889999999999999886421
Q ss_pred -c-hHHHHHh--cCccchhhhhccCCC---H--HHHHHHHHHHHHhhccC--CCccccccCCcHHHHHHhhhc----CCc
Q 014196 147 -T-NKAIMVE--AGILTKLPKNVDAVD---E--STRHEFGELLLSLSSLA--NTHIPLSSSEILPFLVGILES----GSS 211 (429)
Q Consensus 147 -~-nk~~iv~--~G~i~~Lv~lL~~~~---~--~~~~~aa~~L~~Ls~~~--~~~~~i~~~g~i~~Lv~lL~~----~~~ 211 (429)
. .+..+.. ...++.|..+++... . ...+.+..+|..+.... +..+ . -...++.|...+.. ++.
T Consensus 535 ~~~~~~~l~p~l~~ll~~L~~ll~~~~~~~~~~~~~e~l~~al~~vv~~~~~~~~p-~-~~~l~~~L~~~l~~~~~~~~~ 612 (960)
T 1wa5_C 535 FIFHKEDISNSTEILLKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTSEDSIQP-L-FPQLLAQFIEIVTIMAKNPSN 612 (960)
T ss_dssp BSSCGGGTTTTHHHHHHHHHHHHHTTCCCHHHHTSCHHHHHHHHHHHHHHTTTTGG-G-HHHHHHHHHHHHHHHTTSCCC
T ss_pred ccccHHHhhhhHHHHHHHHHHHHHhccCCCCcccccHHHHHHHHHHHHHHHHhhhh-H-HHHHHHHHHHHHHHHHhCCCC
Confidence 1 1222221 123444555555531 1 12233444555443221 1111 1 11245555555543 333
Q ss_pred HHHHHHHHHHHHHhccC-CCChhHHHhcCcHHHHHHhccCC-cchHHHHHHHHHHhh
Q 014196 212 VETKELCIGALYNLSAV-LDNARPMVSNGVVHTLLKLCSMK-ERLSEKSLATLGNLV 266 (429)
Q Consensus 212 ~~~~~~A~~aL~nLs~~-~~n~~~iv~~G~v~~Lv~lL~~~-~~~~~~a~~~L~~La 266 (429)
......++.+|..+... ......-.+...+|.+...|... .++.+.+..++..+.
T Consensus 613 ~~~~~~~~e~l~~l~~~~~~~~~~~~~~~~~p~~~~iL~~~~~~~~~~~~~i~~~l~ 669 (960)
T 1wa5_C 613 PRFTHYTFESIGAILNYTQRQNLPLLVDSMMPTFLTVFSEDIQEFIPYVFQIIAFVV 669 (960)
T ss_dssp HHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHTTCTTTHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhhhHhhHHHHHHHHHHHH
Confidence 35566678888877764 22233334456778888877654 266666666665544
No 111
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=91.16 E-value=0.089 Score=40.73 Aligned_cols=46 Identities=13% Similarity=0.120 Sum_probs=38.5
Q ss_pred hhhhhhHH--HHHHHHhccc--cccCCCCCCCcccchhhHHHHHHHHHhh
Q 014196 9 MRLQFFSR--IRQFIQSKSA--RRRQNEPNHNHEKSRTLKNINCQEEKQV 54 (429)
Q Consensus 9 ~~~~TydR--Ie~W~~~g~~--~T~~~L~~~~L~PN~~Lr~lI~~W~~~~ 54 (429)
-=|++|-+ |++|+..+.. ..++++....+.||..|+++|+.|....
T Consensus 40 ~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~l~~n~~l~~~i~~~~~~~ 89 (99)
T 2y43_A 40 QCSHNYCSLCIRKFLSYKTQCPTCCVTVTEPDLKNNRILDELVKSLNFAR 89 (99)
T ss_dssp TTCCEEEHHHHHHHHTTCCBCTTTCCBCCGGGCEECHHHHHHHHHHHHHH
T ss_pred CCCCHhhHHHHHHHHHCCCCCCCCCCcCChhhCCcCHHHHHHHHHHHHHH
Confidence 35799988 9999987655 7777777778999999999999998754
No 112
>3ebb_A Phospholipase A2-activating protein; armadillo repeat, structural genomics consortium, SGC, WD repeat, acetylation, ATP-binding; 1.90A {Homo sapiens}
Probab=90.77 E-value=0.54 Score=44.43 Aligned_cols=131 Identities=13% Similarity=0.044 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHhccCCCChhHHHhc--CcHHHHHHhccCCc-chHHHHHHHHHHhhCC------hhcHHHHhcCCCChH
Q 014196 213 ETKELCIGALYNLSAVLDNARPMVSN--GVVHTLLKLCSMKE-RLSEKSLATLGNLVVT------STGKKAMEDSPLVPE 283 (429)
Q Consensus 213 ~~~~~A~~aL~nLs~~~~n~~~iv~~--G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~------~e~~~~i~~~~~i~~ 283 (429)
..+.-++++++|+-.++..+..+... .+++.+...+.+.. .++-.++.++.|++.. .+.+.. +..
T Consensus 163 ~n~ml~lR~l~NlF~~~~g~~~l~~~~~~il~~~~~~~~~~nknl~iA~ATl~~NlAv~~~~~~~~~~~~~------ll~ 236 (304)
T 3ebb_A 163 ANQLLALRTFCNCFVGQAGQKLMMSQRESLMSHAIELKSGSNKNIHIALATLALNYSVCFHKDHNIEGKAQ------CLS 236 (304)
T ss_dssp HHHHHHHHHHHHGGGSHHHHHHHHHTHHHHHHHHHGGGSSCCHHHHHHHHHHHHHHHHHHHHSCCHHHHHH------HHH
T ss_pred HHHHHHHHHHHHccCCchhHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHhhcCCchHHHH------HHH
Confidence 45677899999999888777666542 33444444444333 4555555566698862 111111 222
Q ss_pred HHHHhcccCCChhHHHHHHHHHHHHhhCCHHHHHHHHhCCchHHHHHHhhc-CCHHHHHHHHHHHHH
Q 014196 284 SLIEILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALL-GSPLAQRRASKLLQW 349 (429)
Q Consensus 284 ~Lv~~L~~~~s~~~~e~A~~~L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~-~~~~~k~~A~~lL~~ 349 (429)
.+..++....+.+..-.++.+|+++...+.+..+....-|+-..+-.+... .++++.+.|..+|+.
T Consensus 237 ~l~~il~~~~d~EalyR~LvALGtL~~~~~~~~~lak~l~~~~~v~~~~~~~~~~kv~~~~~~~~~~ 303 (304)
T 3ebb_A 237 LISTILEVVQDLEATFRLLVALGTLISDDSNAVQLAKSLGVDSQIKKYSSVSEPAKVSECCRFILNL 303 (304)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHGGGGGGCCSSHHHHHHHHHHHTT
T ss_pred HHHHHHhccCCHHHHHHHHHHHHHHHhCChhHHHHHHHcCHHHHHHHHHhCCCchhHHHHHHHHHHh
Confidence 344455434567777888889999887777777766667765555555554 367777877777654
No 113
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A*
Probab=90.64 E-value=2.4 Score=40.23 Aligned_cols=190 Identities=13% Similarity=0.081 Sum_probs=131.4
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHH----HHHHh-cCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCc
Q 014196 73 LLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIK----KLMAE-LGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYT 147 (429)
Q Consensus 73 ~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r----~~i~~-~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~ 147 (429)
.+..++..|..-+.+.++.++....++.+.....| ..+.. ..++..|+..-+ ++++--.+-..|+.+..+. .
T Consensus 79 ll~~Li~~l~~L~fE~RKd~~~if~~llr~~~~~~~p~v~Yl~~~peil~~L~~gYe--~~diAl~~G~mLRecir~e-~ 155 (341)
T 1upk_A 79 LLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQNILFMLLKGYE--SPEIALNCGIMLRECIRHE-P 155 (341)
T ss_dssp HHHHHHHTGGGSCHHHHHHHHHHHHHHHTCCBTTBCHHHHHHHTCTHHHHHHHHGGG--STTTHHHHHHHHHHHHTSH-H
T ss_pred HHHHHHHhcccCCchhhccHHHHHHHHHhcccCCCCchhHHHHcCHHHHHHHHHhhc--cchhHhHHHHHHHHHHHhH-H
Confidence 45677777777788999999888888877654433 22222 233444444443 3445555556677777774 5
Q ss_pred hHHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccccc------cCCcHHHHHHhhhcCCcHHHHHHHHHH
Q 014196 148 NKAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPLS------SSEILPFLVGILESGSSVETKELCIGA 221 (429)
Q Consensus 148 nk~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~------~~g~i~~Lv~lL~~~~~~~~~~~A~~a 221 (429)
....|...+.+-.+...++.+.-++-..|..++..|-. .++...+ -.......-++|.+++. -+++.++..
T Consensus 156 la~~iL~~~~f~~fF~yv~~~~FdiasDAf~TfkelLt--~Hk~lvaefL~~nyd~Ff~~y~~Ll~S~NY-VTkRQSlKL 232 (341)
T 1upk_A 156 LAKIILWSEQFYDFFRYVEMSTFDIASDAFATFKDLLT--RHKLLSAEFLEQHYDRFFSEYEKLLHSENY-VTKRQSLKL 232 (341)
T ss_dssp HHHHHHHSGGGGHHHHHTTCSSHHHHHHHHHHHHHHHH--SSHHHHHHHHHHTHHHHHHHHHHHTTCSSH-HHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHhcCCCchHHHHHHHHHHHHHh--ccHHHHHHHHHHhHHHHHHHHHHHhcCCcc-hhHHHHHHH
Confidence 66777788888889999988888777777777776643 2333322 12356677789999998 689999999
Q ss_pred HHHhccCCCChhHHH----hcCcHHHHHHhccCCc-chHHHHHHHHHHhhCC
Q 014196 222 LYNLSAVLDNARPMV----SNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVT 268 (429)
Q Consensus 222 L~nLs~~~~n~~~iv----~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~ 268 (429)
|..|-....|...|. +..-+..++.+|+|.+ .++-.|.-+.--.+.+
T Consensus 233 LgelLldr~N~~vM~~Yis~~~nLkl~M~LL~d~sk~Iq~EAFhVFKvFVAN 284 (341)
T 1upk_A 233 LGELLLDRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVAN 284 (341)
T ss_dssp HHHHHHSGGGHHHHHHHTTCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhCchHHHHHHHHhCCHHHHHHHHHHhcCchhchhhhhhhheeeeeeC
Confidence 999998888875543 3466778888999886 7788888777654444
No 114
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=89.25 E-value=0.21 Score=40.42 Aligned_cols=45 Identities=7% Similarity=0.009 Sum_probs=36.6
Q ss_pred hhhhhhHH--HHHHHHhcc-c--cccCCCCC-CCcccchhhHHHHHHHHHh
Q 014196 9 MRLQFFSR--IRQFIQSKS-A--RRRQNEPN-HNHEKSRTLKNINCQEEKQ 53 (429)
Q Consensus 9 ~~~~TydR--Ie~W~~~g~-~--~T~~~L~~-~~L~PN~~Lr~lI~~W~~~ 53 (429)
-=|+||-+ |++|+..+. . ..++++.. ..+.||..|+++|+.|...
T Consensus 69 ~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~n~~l~~~i~~~~p~ 119 (124)
T 3fl2_A 69 VCQHNVCKDCLDRSFRAQVFSCPACRYDLGRSYAMQVNQPLQTVLNQLFPG 119 (124)
T ss_dssp TTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTTCCCCCCHHHHHHHHHHSTT
T ss_pred eCCCcccHHHHHHHHhHCcCCCCCCCccCCCCCCCCCCHHHHHHHHHHccc
Confidence 34799999 999998654 3 77777765 6899999999999998754
No 115
>3ldz_A STAM-1, signal transducing adapter molecule 1; ubiquitin-binding, cytoplasm, UBL conjugation, endosome, membrane, protein transport, SH3 domain; 2.60A {Homo sapiens} SCOP: a.118.9.0
Probab=89.23 E-value=4.4 Score=33.34 Aligned_cols=100 Identities=4% Similarity=-0.054 Sum_probs=73.1
Q ss_pred cccCCCCCCCcccchhhHHHHHHHHHhhcccccCCCCCCCChhhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhc-hH
Q 014196 27 RRRQNEPNHNHEKSRTLKNINCQEEKQVIIEEKNHEQSDIEEDDCVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKED-VK 105 (429)
Q Consensus 27 ~T~~~L~~~~L~PN~~Lr~lI~~W~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~-~~ 105 (429)
.|...+.. ||.. +|.+-|... ...+ ......+..+.++|.++++.++..|+..|..+.+.. ..
T Consensus 13 AT~~~l~~----~dw~---~ileicD~I-----~~~~----~~~k~a~rai~Krl~~~n~~~ql~AL~LLe~~vkNcG~~ 76 (140)
T 3ldz_A 13 ATSEMNTA----EDWG---LILDICDKV-----GQSR----TGPKDCLRSIMRRVNHKDPHVAMQALTLLGACVSNCGKI 76 (140)
T ss_dssp HTCTTSSS----CCHH---HHHHHHHHH-----TTST----THHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHH
T ss_pred HcCCCCCC----cCHH---HHHHHHHHH-----HCCC----cCHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhcCHH
Confidence 45555544 7777 567777643 1111 234667888999999999999999999998888754 34
Q ss_pred HHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhc
Q 014196 106 IKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLA 142 (429)
Q Consensus 106 ~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa 142 (429)
....+.....+.-|+.++...++.+++..+..+...+
T Consensus 77 f~~evas~~Fl~el~~l~~~~~~~Vk~kil~li~~W~ 113 (140)
T 3ldz_A 77 FHLEVCSRDFASEVSNVLNKGHPKVCEKLKALMVEWT 113 (140)
T ss_dssp HHHHHSSHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Confidence 5566666677888888887788999999988887765
No 116
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=88.80 E-value=1.9 Score=36.62 Aligned_cols=109 Identities=6% Similarity=-0.015 Sum_probs=77.3
Q ss_pred hhhhHH-HHHHHHhccccccCCCCCCCcccchhhHHHHHHHHHhhcccccCCCCCCCChhhHHHHHHHHHHhcCCCHHHH
Q 014196 11 LQFFSR-IRQFIQSKSARRRQNEPNHNHEKSRTLKNINCQEEKQVIIEEKNHEQSDIEEDDCVLLQKSVKRLHFGSWEEK 89 (429)
Q Consensus 11 ~~TydR-Ie~W~~~g~~~T~~~L~~~~L~PN~~Lr~lI~~W~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~L~~~~~~~~ 89 (429)
...||+ |++ .|...+.. ||.++ |.+-|.... ..+ ......+..+.++|.++++.++
T Consensus 13 ~~p~~~~Iek-------ATs~~~~~----~Dw~~---~leicD~I~-----~~~----~~~keA~ral~krl~~~n~~vq 69 (163)
T 1x5b_A 13 ANPFEQDVEK-------ATNEYNTT----EDWSL---IMDICDKVG-----STP----NGAKDCLKAIMKRVNHKVPHVA 69 (163)
T ss_dssp CCTTHHHHHH-------HTCTTCSS----CCHHH---HHHHHHHHH-----HSS----SHHHHHHHHHHHHHTCSSHHHH
T ss_pred CChHHHHHHH-------HcCCCCCC----cCHHH---HHHHHHHHh-----CCC----ccHHHHHHHHHHHHcCCCHHHH
Confidence 355776 653 35544444 77774 556665320 011 1346678889999999999999
Q ss_pred HHHHHHHHHHhhh-chHHHHHHHhcCcHHHHHHhhcC-CCHHHHHHHHHHHHHhc
Q 014196 90 EMAAKEIEKLAKE-DVKIKKLMAELGVIQMLVSMVST-EVIGRRRAAIKALIQLA 142 (429)
Q Consensus 90 ~~Aa~~L~~La~~-~~~~r~~i~~~G~i~~Lv~lL~s-~~~~~~~~A~~aL~nLa 142 (429)
..|+..|-.+.+. .......+.....+.-|+.++.. .++.+++.++..+...+
T Consensus 70 l~AL~LLd~~vkNcG~~Fh~evas~~Fl~el~~l~~~~~~~~Vk~kil~li~~W~ 124 (163)
T 1x5b_A 70 LQALTLLGACVANCGKIFHLEVCSRDFATEVRAVIKNKAHPKVCEKLKSLMVEWS 124 (163)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHTSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHccCCCHHHHHHHHHHHHHHH
Confidence 9999999988876 35566777777788888888875 67899999988887765
No 117
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}
Probab=88.37 E-value=9.2 Score=34.20 Aligned_cols=121 Identities=17% Similarity=0.152 Sum_probs=77.6
Q ss_pred HHHHhcCcHHHHHHhhcC-----------CCHHHHHHHHHHHHHhccCCCchHHHHH-hcCccchhhhhccCCCHHHHHH
Q 014196 108 KLMAELGVIQMLVSMVST-----------EVIGRRRAAIKALIQLANGTYTNKAIMV-EAGILTKLPKNVDAVDESTRHE 175 (429)
Q Consensus 108 ~~i~~~G~i~~Lv~lL~s-----------~~~~~~~~A~~aL~nLa~~~~~nk~~iv-~~G~i~~Lv~lL~~~~~~~~~~ 175 (429)
+.+ ..||+..|+.+|.. .+...+..++.+|..+.... .....+. ..+++..|...|.+....++..
T Consensus 38 ~~F-~~~Gl~~L~~~L~~~~~~~~~~~~~~~~~~~~~~l~CLkalmn~~-~G~~~vl~~~~~i~~l~~~L~s~~~~~r~~ 115 (233)
T 2f31_A 38 QTF-GAEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNK-FGIKTMLETEEGILLLVRAMDPAVPNMMID 115 (233)
T ss_dssp HHH-HHHHHHHHHHHHHHHHTCC-----CCHHHHHHHHHHHHHHHTSSH-HHHHHHHTSSSHHHHHHTTCCTTSHHHHHH
T ss_pred HHH-HHhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHhCCh-HHHHHHHcCcHHHHHHHHHhCCCCchHHHH
Confidence 344 46788888888753 13566778888888887654 3455555 4568888899898888888888
Q ss_pred HHHHHHHhhccCC--C-cccc----------ccCCcHHHHHHhhhcCCcHHHHHHHHHHHHH-hccCCCC
Q 014196 176 FGELLLSLSSLAN--T-HIPL----------SSSEILPFLVGILESGSSVETKELCIGALYN-LSAVLDN 231 (429)
Q Consensus 176 aa~~L~~Ls~~~~--~-~~~i----------~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~n-Ls~~~~n 231 (429)
+..+|..+|..++ + ...+ .+..-...+++.+.+.+..+.+. ++..+.| +...+++
T Consensus 116 ~leLL~~lc~~~~~~G~~~~VL~Al~~~~~~~e~~RF~~lv~~l~~~~~~e~~~-~~m~lIN~li~~~~d 184 (233)
T 2f31_A 116 AAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKV-GCLQLINALITPAEE 184 (233)
T ss_dssp HHHHHHHHHTCSSSSCHHHHHHHHHHHHHHHHTSCTTHHHHHTTSTTSCHHHHH-HHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHhCCCCCChHHHHHHHHHHHHHhCCcchHHHHHHHHhcCChHHHHH-HHHHHHHHHHCCCCC
Confidence 8888888886653 2 2222 12334566777777544435554 4444444 4444443
No 118
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=86.68 E-value=0.36 Score=40.54 Aligned_cols=44 Identities=5% Similarity=-0.030 Sum_probs=36.9
Q ss_pred hhhhhhHH--HHHHHHhcc-c--cccCCCCCC-CcccchhhHHHHHHHHH
Q 014196 9 MRLQFFSR--IRQFIQSKS-A--RRRQNEPNH-NHEKSRTLKNINCQEEK 52 (429)
Q Consensus 9 ~~~~TydR--Ie~W~~~g~-~--~T~~~L~~~-~L~PN~~Lr~lI~~W~~ 52 (429)
-=|+||-+ |++|+..+. . +.++++... .+.||..|+++|..|..
T Consensus 95 ~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~l~~n~~l~~lv~~~~p 144 (150)
T 1z6u_A 95 ECFHNVCKDCLQRSFKAQVFSCPACRHDLGQNYIMIPNEILQTLLDLFFP 144 (150)
T ss_dssp TTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTTCCCCBCHHHHHHHHHHST
T ss_pred CCCCchhHHHHHHHHHhCCCcCCCCCccCCCCCCCCCCHHHHHHHHHHhh
Confidence 34799999 999998765 3 788888766 89999999999998874
No 119
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=86.64 E-value=16 Score=35.43 Aligned_cols=202 Identities=14% Similarity=0.098 Sum_probs=114.9
Q ss_pred ccchhhHHHHHHHHHhhcccccCCCCCCCChhhHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHhhhch-HHHHHHHhcCc
Q 014196 38 EKSRTLKNINCQEEKQVIIEEKNHEQSDIEEDDCVLLQKSVKRLHFGSWEEK-EMAAKEIEKLAKEDV-KIKKLMAELGV 115 (429)
Q Consensus 38 ~PN~~Lr~lI~~W~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~L~~~~~~~~-~~Aa~~L~~La~~~~-~~r~~i~~~G~ 115 (429)
.|...=+.+|.+|.... ..+-........ -...|..|.++....+ ...+..|+---+..+ .--+.++ .+|
T Consensus 39 ~~~e~Kw~mi~~~~~~~-~~~~~~~~~~~s------P~~yi~~L~~~~~~~kl~~~L~sL~v~Lrt~~~sWV~~F~-~~G 110 (383)
T 3eg5_B 39 KDIVIKREMVSQYLHTS-KAGMNQKESSRS------AMMYIQELRSGLRDMHLLSCLESLRVSLTSHPVSWVQTFG-AEG 110 (383)
T ss_dssp SCHHHHHHHHHHHHHHC----------CCC------HHHHHHHHTTTCCHHHHHHHHHHHHHHHHHSCHHHHHHHH-HHH
T ss_pred CCHHHHHHHHHHHHHHh-hhccccccCCCC------HHHHHHHHHhcccchhHHHHHHHHHHHHhhCccHHHHHHH-Hcc
Confidence 37777788998887542 111000000111 1234566665532222 234555554333332 2224445 678
Q ss_pred HHHHHHhhcC-----------CCHHHHHHHHHHHHHhccCCCchHHHHH-hcCccchhhhhccCCCHHHHHHHHHHHHHh
Q 014196 116 IQMLVSMVST-----------EVIGRRRAAIKALIQLANGTYTNKAIMV-EAGILTKLPKNVDAVDESTRHEFGELLLSL 183 (429)
Q Consensus 116 i~~Lv~lL~s-----------~~~~~~~~A~~aL~nLa~~~~~nk~~iv-~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~L 183 (429)
+..|+.+|.. .+...+..++.+|..+.... .....+. ...+|..|+.+|.+....++..+..+|..+
T Consensus 111 l~~Ll~iL~~~~~~~~~~~~~~d~~~q~~~l~CLkalmN~~-~G~~~vl~~~~~i~~l~~~L~s~~~~~~~~aleLL~~l 189 (383)
T 3eg5_B 111 LASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNK-FGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSAL 189 (383)
T ss_dssp HHHHHHHHHHHHTCC-------CHHHHHHHHHHHHHHTSSH-HHHHHHHTCSSHHHHHHHTCCTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccccccchhhHHHHHHHHHHHHHHhcch-hhHHHHHcChHHHHHHHHHhCCCchHHHHHHHHHHHHH
Confidence 9999998852 24577888889998887654 3555555 456888899999888888888888888888
Q ss_pred hccCC--C-cccc----------ccCCcHHHHHHhhhcCCcHHHHHHHHHHHHH-hccCCCCh-------hHHHhcCcHH
Q 014196 184 SSLAN--T-HIPL----------SSSEILPFLVGILESGSSVETKELCIGALYN-LSAVLDNA-------RPMVSNGVVH 242 (429)
Q Consensus 184 s~~~~--~-~~~i----------~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~n-Ls~~~~n~-------~~iv~~G~v~ 242 (429)
|..++ + ...+ ++..-...++..|.++...+.+. ++..|.| +...+++. ..+...|..+
T Consensus 190 c~~~~~~gG~~~VL~Al~~~~~~~e~~RF~~lv~~L~~~~~~e~~~-~~m~lIN~li~~~~dl~~R~~lR~ef~~~Gl~~ 268 (383)
T 3eg5_B 190 CILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKV-GCLQLINALITPAEELDFRVHIRSELMRLGLHQ 268 (383)
T ss_dssp HTCCSSTTHHHHHHHHHHHHHHHHTSCTTHHHHHTTSTTSCHHHHH-HHHHHHHHHHTTCCCHHHHHHHHHHHHHTTHHH
T ss_pred HhCcCcCCcHHHHHHHHHHHHHhCCCCcHHHHHHHHHccCcHHHHH-HHHHHHHHHHcCCCCHHHHHHHHHHHHHCChHH
Confidence 86653 2 2221 13445677888888754435655 4444544 44444432 2334556555
Q ss_pred HHHHhccC
Q 014196 243 TLLKLCSM 250 (429)
Q Consensus 243 ~Lv~lL~~ 250 (429)
.+-. |+.
T Consensus 269 il~~-lr~ 275 (383)
T 3eg5_B 269 VLQE-LRE 275 (383)
T ss_dssp HHHH-HTT
T ss_pred HHHH-Hhc
Confidence 4443 553
No 120
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=86.62 E-value=2.5 Score=36.18 Aligned_cols=109 Identities=11% Similarity=0.070 Sum_probs=77.7
Q ss_pred HHHHHHhccccccCCCCCCCcccchhhHHHHHHHHHhhcccccCCCCCCCChhhHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 014196 17 IRQFIQSKSARRRQNEPNHNHEKSRTLKNINCQEEKQVIIEEKNHEQSDIEEDDCVLLQKSVKRLHFGSWEEKEMAAKEI 96 (429)
Q Consensus 17 Ie~W~~~g~~~T~~~L~~~~L~PN~~Lr~lI~~W~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~L~~~~~~~~~~Aa~~L 96 (429)
+++|++. .|...+.. ||.+ +|.+-|..... .+ ......+..+.++|+++++.++..|+..|
T Consensus 14 ~~~~Iek---ATs~~l~~----~Dw~---~ileicD~I~~-----~~----~~~k~A~ral~krl~~~n~~vql~AL~LL 74 (171)
T 1juq_A 14 LESWLNK---ATNPSNRQ----EDWE---YIIGFCDQINK-----EL----EGPQIAVRLLAHKIQSPQEWEALQALTVL 74 (171)
T ss_dssp HHHHHHH---HTCTTCSS----CCHH---HHHHHHHHHHH-----ST----THHHHHHHHHHHHHTCSSHHHHHHHHHHH
T ss_pred HHHHHHH---HcCCCCCC----cCHH---HHHHHHHHHHc-----CC----ccHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 4444433 35555543 7876 46677763310 11 12466788899999999999999999999
Q ss_pred HHHhhhc-hHHHHHHHhcCcHHHHHHhhcC------CCHHHHHHHHHHHHHhccC
Q 014196 97 EKLAKED-VKIKKLMAELGVIQMLVSMVST------EVIGRRRAAIKALIQLANG 144 (429)
Q Consensus 97 ~~La~~~-~~~r~~i~~~G~i~~Lv~lL~s------~~~~~~~~A~~aL~nLa~~ 144 (429)
-.+.+.. ......+.....+.-|+.++.. .+..+++.++..+...+..
T Consensus 75 d~~vkNCG~~Fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~~ 129 (171)
T 1juq_A 75 EACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWTMA 129 (171)
T ss_dssp HHHHHHSHHHHHHHHTSHHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCHHHHHHHhhHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 9998863 4567778888889999999863 3588999998888877643
No 121
>3c2g_A SYS-1 protein; beta-catenin, phylogeny, SYS-1, developmental protein, DNA-binding, nucleus; 2.50A {Caenorhabditis elegans} PDB: 3c2h_A*
Probab=86.40 E-value=6.9 Score=37.44 Aligned_cols=110 Identities=19% Similarity=0.163 Sum_probs=82.7
Q ss_pred HHHHhccCCCchHHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCcccc--ccCCcHHHHHHhhhcCCcHHH
Q 014196 137 ALIQLANGTYTNKAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPL--SSSEILPFLVGILESGSSVET 214 (429)
Q Consensus 137 aL~nLa~~~~~nk~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i--~~~g~i~~Lv~lL~~~~~~~~ 214 (429)
-|.||-.++...-...|++++|..+..+++-+..+..+.-..+|...| +.+..- --...+|.+++.+.-....++
T Consensus 265 DLL~LLmHdSnAIDGFVk~DGv~~I~TvinYpN~~l~RaG~KLLLQVS---DaksL~~t~L~e~LPFi~~~i~~h~eDdv 341 (619)
T 3c2g_A 265 DLLGLLLHDSDAIDGFVRSDGVGAITTVVQYPNNDLIRAGCKLLLQVS---DAKALAKTPLENILPFLLRLIEIHPDDEV 341 (619)
T ss_dssp HHHHHHCCSHHHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHT---TCGGGGTSCCTTHHHHHHHHHHHCCCHHH
T ss_pred HHHHHHhcccccccceeecccceeEEEEeecCCcHHHHhhhheeeeec---chHHHhhccccccchHHHHHhccCCCcce
Confidence 356777776333678899999999999999888888777777888887 333221 135678999998875433478
Q ss_pred HHHHHHHHHHhccCCCCh-hHHHhcCcHHHHHHhcc
Q 014196 215 KELCIGALYNLSAVLDNA-RPMVSNGVVHTLLKLCS 249 (429)
Q Consensus 215 ~~~A~~aL~nLs~~~~n~-~~iv~~G~v~~Lv~lL~ 249 (429)
....-+-|.|...|.... ...+..|+++.|-..+.
T Consensus 342 vYSGTGFLSNVVAHKq~VKelAI~~nAI~LLh~~I~ 377 (619)
T 3c2g_A 342 IYSGTGFLSNVVAHKQHVKDIAIRSNAIFLLHTIIS 377 (619)
T ss_dssp HHHHHHHHHHHSTTCHHHHHHHHHTTHHHHHHHHHH
T ss_pred EEecchHHHHHHhcccchHHHHhccCcHHHHHHHHh
Confidence 888899999999887665 55677899999888654
No 122
>3g2s_A C-terminal fragment of sortilin-related receptor; ADP-ribosylation factor binding protein GGA1, VHS, acidic- cluster dileucine signal, sorla; 1.70A {Homo sapiens} SCOP: a.118.9.2 PDB: 3g2t_A* 3g2u_A 3g2v_A* 3g2w_A 1ujk_A* 1jwf_A 1ujj_A 1jwg_A* 1py1_A*
Probab=86.14 E-value=10 Score=31.57 Aligned_cols=101 Identities=10% Similarity=-0.004 Sum_probs=74.9
Q ss_pred cccCCCCCCCcccchhhHHHHHHHHHhhcccccCCCCCCCChhhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhc-hH
Q 014196 27 RRRQNEPNHNHEKSRTLKNINCQEEKQVIIEEKNHEQSDIEEDDCVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKED-VK 105 (429)
Q Consensus 27 ~T~~~L~~~~L~PN~~Lr~lI~~W~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~-~~ 105 (429)
.|...+.. ||.. +|.+.|.... ..+ ......+..+.++|.+.++.++..|+..|-.+.+.. ..
T Consensus 19 ATs~~l~~----~dw~---~ileicD~I~-----~~~----~~pk~a~ral~krl~~~n~~v~l~AL~LLe~cvkNCG~~ 82 (149)
T 3g2s_A 19 ATNPLNKE----LDWA---SINGFCEQLN-----EDF----EGPPLATRLLAHKIQSPQEWEAIQALTVLETCMKSCGKR 82 (149)
T ss_dssp HSCTTCSS----CCHH---HHHHHHHHGG-----GSS----SHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCCHH
T ss_pred HcCCCCCC----cCHH---HHHHHHHHHH-----CCC----CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCHH
Confidence 46665554 7777 5777787431 111 134667889999999999999999999999888754 34
Q ss_pred HHHHHHhcCcHHHHHHhhcC------CCHHHHHHHHHHHHHhcc
Q 014196 106 IKKLMAELGVIQMLVSMVST------EVIGRRRAAIKALIQLAN 143 (429)
Q Consensus 106 ~r~~i~~~G~i~~Lv~lL~s------~~~~~~~~A~~aL~nLa~ 143 (429)
....+....++.-|+.++.. .++.+++..+..+...+.
T Consensus 83 fh~eias~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~ 126 (149)
T 3g2s_A 83 FHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWTV 126 (149)
T ss_dssp HHHHHTSHHHHHHHHHHHCTTTTGGGSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHcccccCCCCCHHHHHHHHHHHHHHHH
Confidence 56777777888889999863 578999999888887753
No 123
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}
Probab=85.60 E-value=16 Score=32.59 Aligned_cols=126 Identities=11% Similarity=0.081 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHhccCCCChhHHHhc-CcHHHHHHhccCCc-chHHHHHHHHHHhhCCh--hc-HHHHhcC---------
Q 014196 213 ETKELCIGALYNLSAVLDNARPMVSN-GVVHTLLKLCSMKE-RLSEKSLATLGNLVVTS--TG-KKAMEDS--------- 278 (429)
Q Consensus 213 ~~~~~A~~aL~nLs~~~~n~~~iv~~-G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~--e~-~~~i~~~--------- 278 (429)
.....++.+|..+.........++.. +++..|...|..+. .++..++.+|..+|..+ +| ...+.++
T Consensus 69 ~~~~~~l~CLkalmn~~~G~~~vl~~~~~i~~l~~~L~s~~~~~r~~~leLL~~lc~~~~~~G~~~~VL~Al~~~~~~~e 148 (233)
T 2f31_A 69 RNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDE 148 (233)
T ss_dssp HHHHHHHHHHHHHTSSHHHHHHHHTSSSHHHHHHTTCCTTSHHHHHHHHHHHHHHHTCSSSSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCChHHHHHHHcCcHHHHHHHHHhCCCCchHHHHHHHHHHHHHhCCCCCChHHHHHHHHHHHHHhCC
Confidence 45667888999888776666666654 78888888886554 77888888998888754 37 5544322
Q ss_pred CCChHHHHHhcccCCChhHHHHHHHHHHH-HhhC--CH----HHHHHHHhCCchHHHHHHhhcCCHHH
Q 014196 279 PLVPESLIEILTWEEKPKCQELSAYILMI-LAHQ--SS----EQRDKMAKSGIVHVSLQLALLGSPLA 339 (429)
Q Consensus 279 ~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~-L~~~--~~----~~~~~i~~~G~v~~L~~ll~~~~~~~ 339 (429)
..-...+|+.+........+ .++..+.| +... +. ..|..+...|..+.+-.+-..+++..
T Consensus 149 ~~RF~~lv~~l~~~~~~e~~-~~~m~lIN~li~~~~dl~~R~~lR~ef~~~Gl~~il~~l~~~~~~~L 215 (233)
T 2f31_A 149 VERFQPLLDGLKSGTSIALK-VGCLQLINALITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDM 215 (233)
T ss_dssp SCTTHHHHHTTSTTSCHHHH-HHHHHHHHHHHTTCCCHHHHHHHHHHHHHTTHHHHHHHHHHCCCHHH
T ss_pred cchHHHHHHHHhcCChHHHH-HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCChHHHHHHHhccCCHHH
Confidence 22234688888622222222 23333333 3332 22 46677778896665554444455543
No 124
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}
Probab=84.16 E-value=15 Score=39.95 Aligned_cols=212 Identities=11% Similarity=0.056 Sum_probs=108.7
Q ss_pred CCHHHHHHHHHHHHHhccCCCchHHHHHhcCccchhhhhc---c--CCCHHHHHHHHHHHHHhhccCC-CccccccCCcH
Q 014196 126 EVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNV---D--AVDESTRHEFGELLLSLSSLAN-THIPLSSSEIL 199 (429)
Q Consensus 126 ~~~~~~~~A~~aL~nLa~~~~~nk~~iv~~G~i~~Lv~lL---~--~~~~~~~~~aa~~L~~Ls~~~~-~~~~i~~~g~i 199 (429)
.+...++.|+.+|..++....... ...++.++.++ . ...+.++..++.++..++..-. +...+ ..++
T Consensus 476 ~~w~~~eaal~~l~~iae~~~~~~-----~~~l~~l~~~l~~l~~~d~~~~vr~~a~~~l~~~~~~l~~~~~~l--~~vl 548 (971)
T 2x1g_F 476 THWTKLEACIYSFQSVAEHFGGEE-----KRQIPRLMRVLAEIPYEKLNVKLLGTALETMGSYCNWLMENPAYI--PPAI 548 (971)
T ss_dssp TCCHHHHHHHHHHHHTTTC-----------CHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHTHHHHC----CH--HHHH
T ss_pred CcHHHHHHHHHHHHHHHhhcChhh-----hHHHHHHHHHHHhcCccccCHHHHHHHHHHHHHHHHHHhcCHHHH--HHHH
Confidence 456789999999999986642211 12233333322 2 2356778888888888874322 21111 2356
Q ss_pred HHHHHhhhcCCcHHHHHHHHHHHHHhccCCCChhHHHh--cCcHHHHHHhccCC--c-chHHHHHHHHHHhhCC--hhcH
Q 014196 200 PFLVGILESGSSVETKELCIGALYNLSAVLDNARPMVS--NGVVHTLLKLCSMK--E-RLSEKSLATLGNLVVT--STGK 272 (429)
Q Consensus 200 ~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~n~~~iv~--~G~v~~Lv~lL~~~--~-~~~~~a~~~L~~La~~--~e~~ 272 (429)
+.|+..| + + .++..|+.++.+++..- ...+.. .+.+..+..++... + ..+..+..++..++.. ++..
T Consensus 549 ~~l~~~l-~--~-~v~~~A~~al~~l~~~~--~~~l~p~~~~ll~~l~~~l~~~~~~~~~~~~~~~ai~~i~~~~~~~~~ 622 (971)
T 2x1g_F 549 NLLVRGL-N--S-SMSAQATLGLKELCRDC--QLQLKPYADPLLNACHASLNTGRMKNSDSVRLMFSIGKLMSLLRPEEI 622 (971)
T ss_dssp HHHHHHH-H--S-SCHHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHHHHHHTSCTTHH
T ss_pred HHHHHHh-C--h-HHHHHHHHHHHHHHHHH--HHhccccHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHhCCHHHH
Confidence 6677666 3 3 57888999999999532 222221 23444455555542 2 6667777777766542 2333
Q ss_pred HHHhcCCCChHHHHHhccc---CC--ChhHHHHHHHHHHHHhh-----CCH--HH------HH--HHHhCCchHHHHHHh
Q 014196 273 KAMEDSPLVPESLIEILTW---EE--KPKCQELSAYILMILAH-----QSS--EQ------RD--KMAKSGIVHVSLQLA 332 (429)
Q Consensus 273 ~~i~~~~~i~~~Lv~~L~~---~~--s~~~~e~A~~~L~~L~~-----~~~--~~------~~--~i~~~G~v~~L~~ll 332 (429)
..... .+.+.+++.+.. .. ++..+......+..|+. .+. +. .. .-....++|.+..++
T Consensus 623 ~~~~~--~ll~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~l 700 (971)
T 2x1g_F 623 PKYLD--IIVSPCFEELQAICQADSKTPAARIRTIFRLNMISTLFSSLNTDVDEQATDQPIVQPVLLVMQRTMPIFKRIA 700 (971)
T ss_dssp HHHHH--HHHHHHHHHHHHHHTC---CHHHHHHHHHHHHHHHHHHHHHTC-------------CCHHHHHTTHHHHHHHH
T ss_pred HHHHH--HHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHhhcCCCcCcccccccCCCchHHHHHHHHHHHHHHH
Confidence 33222 111123332210 11 23233444444444432 110 00 00 011234777777777
Q ss_pred hcC--CHHHHHHHHHHHHHHHh
Q 014196 333 LLG--SPLAQRRASKLLQWFKD 352 (429)
Q Consensus 333 ~~~--~~~~k~~A~~lL~~l~~ 352 (429)
... ++.+.+.++++++.+-.
T Consensus 701 ~~~~~~~~v~e~~~~~~~~~~~ 722 (971)
T 2x1g_F 701 EMWVEEIDVLEAACSAMKHAIT 722 (971)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHH
T ss_pred HhccccHHHHHHHHHHHHHHHH
Confidence 653 67888999988777554
No 125
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=83.64 E-value=15 Score=39.69 Aligned_cols=134 Identities=11% Similarity=0.114 Sum_probs=78.7
Q ss_pred cCCCHHHHHHHHHHHHHhccCCCch-HHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccC-CCccccccCCcHHH
Q 014196 124 STEVIGRRRAAIKALIQLANGTYTN-KAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLA-NTHIPLSSSEILPF 201 (429)
Q Consensus 124 ~s~~~~~~~~A~~aL~nLa~~~~~n-k~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~-~~~~~i~~~g~i~~ 201 (429)
.+.+...++.++++++.++...... ...+.. .++.+..+. ...+.++..++.++..++..- .+... -...++.
T Consensus 459 ~~~~w~~~eaal~al~~i~~~~~~~~~~~l~~--l~~~l~~l~-~~~~~vr~~~~~~l~~~~~~l~~~~~~--l~~vl~~ 533 (963)
T 2x19_B 459 EPYSWQHTEALLYGFQSIAETIDVNYSDVVPG--LIGLIPRIS-ISNVQLADTVMFTIGALSEWLADHPVM--INSVLPL 533 (963)
T ss_dssp CSCCHHHHHHHHHHHHHHTTSCCSSCCSHHHH--HHHHGGGSC-CCSHHHHHHHHHHHHHTHHHHHHCHHH--HTTTHHH
T ss_pred CCCchHHHHHHHHHHHHHHhhcCchhhHHHHH--HHHHHHhCC-CCcHHHHHHHHHHHHHHHHHHHhCHHH--HHHHHHH
Confidence 4567788999999999998664221 111111 222222222 234667777778888777432 22211 2467888
Q ss_pred HHHhhhcCCcHHHHHHHHHHHHHhccCCCChhHHHh--cCcHHHHHHhccCC--c-chHHHHHHHHHHhhC
Q 014196 202 LVGILESGSSVETKELCIGALYNLSAVLDNARPMVS--NGVVHTLLKLCSMK--E-RLSEKSLATLGNLVV 267 (429)
Q Consensus 202 Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~n~~~iv~--~G~v~~Lv~lL~~~--~-~~~~~a~~~L~~La~ 267 (429)
|+..|.+ + .++..|+.+|.+++..-. ..+.. .+.+..+..++... + ..+.....++..++.
T Consensus 534 l~~~l~~--~-~V~~~A~~al~~l~~~~~--~~l~p~~~~il~~l~~~l~~~~~~~~~~~~~~eai~~i~~ 599 (963)
T 2x19_B 534 VLHALGN--P-ELSVSSVSTLKKICRECK--YDLPPYAANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLS 599 (963)
T ss_dssp HHHHTTC--G-GGHHHHHHHHHHHHHHTG--GGCTTTHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHT
T ss_pred HHHHhCC--c-hHHHHHHHHHHHHHHHHH--HHHHhhHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHh
Confidence 8888855 4 678899999999995321 12221 23344444555532 2 567777777877765
No 126
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=82.97 E-value=0.5 Score=37.00 Aligned_cols=49 Identities=14% Similarity=0.180 Sum_probs=37.0
Q ss_pred CcchhhhhhhhHH--HHHHHHhccc--cccCCCCCC----CcccchhhHHHHHHHHH
Q 014196 4 PSSSYMRLQFFSR--IRQFIQSKSA--RRRQNEPNH----NHEKSRTLKNINCQEEK 52 (429)
Q Consensus 4 ~~~~~~~~~TydR--Ie~W~~~g~~--~T~~~L~~~----~L~PN~~Lr~lI~~W~~ 52 (429)
|+..--=|++|-+ |++|+..+.. ..++++... .+.+|..|+++|..|..
T Consensus 28 p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~l~~n~~l~~~i~~~~~ 84 (108)
T 2ckl_A 28 ATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVP 84 (108)
T ss_dssp EEEETTTCCEEEHHHHHHHHTSCSBCTTTCCBSCSSCGGGGEEECHHHHHHHHHHST
T ss_pred cCEeCCCCChhhHHHHHHHHHhCCcCcCCCccccccCcccccCcCHHHHHHHHHHhh
Confidence 3333245799988 9999987655 666666654 78999999999988764
No 127
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=82.50 E-value=12 Score=40.58 Aligned_cols=155 Identities=11% Similarity=0.083 Sum_probs=91.0
Q ss_pred cCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhh---cCCCHHHHHHHHHHHHHhccCCCchHHHHHhcCcc
Q 014196 82 HFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMV---STEVIGRRRAAIKALIQLANGTYTNKAIMVEAGIL 158 (429)
Q Consensus 82 ~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL---~s~~~~~~~~A~~aL~nLa~~~~~nk~~iv~~G~i 158 (429)
...++..+..++..+..++..-... +...++.++..| .++++.++..++++|...+..-..+... . ...+
T Consensus 459 ~~~~w~~~eaal~al~~i~~~~~~~-----~~~~l~~l~~~l~~l~~~~~~vr~~~~~~l~~~~~~l~~~~~~-l-~~vl 531 (963)
T 2x19_B 459 EPYSWQHTEALLYGFQSIAETIDVN-----YSDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWLADHPVM-I-NSVL 531 (963)
T ss_dssp CSCCHHHHHHHHHHHHHHTTSCCSS-----CCSHHHHHHHHGGGSCCCSHHHHHHHHHHHHHTHHHHHHCHHH-H-TTTH
T ss_pred CCCchHHHHHHHHHHHHHHhhcCch-----hhHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHhCHHH-H-HHHH
Confidence 3457888888999999988542210 012233444333 3357889999999999887542112222 2 3567
Q ss_pred chhhhhccCCCHHHHHHHHHHHHHhhccCCCccccc--cCCcHHHHHHhhhcCC-cHHHHHHHHHHHHHhccCC--CChh
Q 014196 159 TKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPLS--SSEILPFLVGILESGS-SVETKELCIGALYNLSAVL--DNAR 233 (429)
Q Consensus 159 ~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~--~~g~i~~Lv~lL~~~~-~~~~~~~A~~aL~nLs~~~--~n~~ 233 (429)
+.++..++. +.++..|+.+|.+++.. .+..+. -...+..|..++..++ ....+..+..++..++... +...
T Consensus 532 ~~l~~~l~~--~~V~~~A~~al~~l~~~--~~~~l~p~~~~il~~l~~~l~~~~~~~~~~~~~~eai~~i~~~~~~~~~~ 607 (963)
T 2x19_B 532 PLVLHALGN--PELSVSSVSTLKKICRE--CKYDLPPYAANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSALQVEEIL 607 (963)
T ss_dssp HHHHHHTTC--GGGHHHHHHHHHHHHHH--TGGGCTTTHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHhCC--chHHHHHHHHHHHHHHH--HHHHHHhhHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHhcCCHHHHH
Confidence 777776754 67788889999999853 233332 1234445555666532 2367777888888887543 2222
Q ss_pred HHHhcCcHHHHHHhc
Q 014196 234 PMVSNGVVHTLLKLC 248 (429)
Q Consensus 234 ~iv~~G~v~~Lv~lL 248 (429)
..+ ...++++...+
T Consensus 608 ~~~-~~l~~~l~~~l 621 (963)
T 2x19_B 608 KNL-HSLISPYIQQL 621 (963)
T ss_dssp HHH-HHHHHHHHHHH
T ss_pred HHH-HHHHHHHHHHH
Confidence 222 24455555544
No 128
>1mhq_A ADP-ribosylation factor binding protein GGA2; super helix, protein transport; 2.20A {Homo sapiens} SCOP: a.118.9.2
Probab=82.30 E-value=6.2 Score=32.77 Aligned_cols=101 Identities=12% Similarity=0.037 Sum_probs=74.9
Q ss_pred cccCCCCCCCcccchhhHHHHHHHHHhhcccccCCCCCCCChhhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhh-chH
Q 014196 27 RRRQNEPNHNHEKSRTLKNINCQEEKQVIIEEKNHEQSDIEEDDCVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKE-DVK 105 (429)
Q Consensus 27 ~T~~~L~~~~L~PN~~Lr~lI~~W~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~-~~~ 105 (429)
.|...+. .||.+ +|.+-|..... . .......+..+.++|+++++.++..|+..|-.+.+. +..
T Consensus 9 ATs~~l~----~~dw~---~~leicD~I~~-----~----~~~~k~a~rai~krl~~~n~~vql~AL~LLe~~vkNCG~~ 72 (148)
T 1mhq_A 9 ATDPSMS----EQDWS---AIQNFCEQVNT-----D----PNGPTHAPWLLAHKIQSPQEKEALYALTVLEMCMNHCGEK 72 (148)
T ss_dssp HHCTTCS----SCCHH---HHHHHHHHHHH-----S----SHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHH
T ss_pred HcCCCCC----CcCHH---HHHHHHHHHHc-----C----CccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCHH
Confidence 3555444 37876 46677763310 0 123466788999999999999999999999998876 355
Q ss_pred HHHHHHhcCcHHHHHHhhcC------CCHHHHHHHHHHHHHhcc
Q 014196 106 IKKLMAELGVIQMLVSMVST------EVIGRRRAAIKALIQLAN 143 (429)
Q Consensus 106 ~r~~i~~~G~i~~Lv~lL~s------~~~~~~~~A~~aL~nLa~ 143 (429)
....+....++.-|+.++.. .++.+++.++..+...+.
T Consensus 73 fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~ 116 (148)
T 1mhq_A 73 FHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTV 116 (148)
T ss_dssp HHHHHTSHHHHHHHHHTTCCSTTSCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHccccCCCCCCHHHHHHHHHHHHHHHH
Confidence 67788888889999999874 468999999888877764
No 129
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=82.07 E-value=7.7 Score=34.66 Aligned_cols=108 Identities=11% Similarity=0.045 Sum_probs=76.0
Q ss_pred hhhHH-HHHHHHhccccccCCCCCCCcccchhhHHHHHHHHHhhcccccCCCCCCCChhhHHHHHHHHHHhcCCCHHHHH
Q 014196 12 QFFSR-IRQFIQSKSARRRQNEPNHNHEKSRTLKNINCQEEKQVIIEEKNHEQSDIEEDDCVLLQKSVKRLHFGSWEEKE 90 (429)
Q Consensus 12 ~TydR-Ie~W~~~g~~~T~~~L~~~~L~PN~~Lr~lI~~W~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~L~~~~~~~~~ 90 (429)
-+||. |++ .|...+.. ||.+ +|.+-|... . ..+ ......+..+.++|.+.++.++.
T Consensus 7 ~~~~~~i~k-------AT~~~~~~----~dw~---~ileicD~I---~--~~~----~~~k~a~ral~krl~~~n~~v~l 63 (226)
T 3zyq_A 7 GTFERLLDK-------ATSQLLLE----TDWE---SILQICDLI---R--QGD----TQAKYAVNSIKKKVNDKNPHVAL 63 (226)
T ss_dssp CHHHHHHHH-------HTCTTCSS----CCHH---HHHHHHHHH---H--TTS----SCHHHHHHHHHHHHTCSSHHHHH
T ss_pred chHHHHHHH-------HcCCCCCC----cCHH---HHHHHHHHH---h--CCC----ccHHHHHHHHHHHHcCCCHHHHH
Confidence 46666 543 46665554 7776 466666543 0 111 12367788999999999999999
Q ss_pred HHHHHHHHHhhhc-hHHHHHHHhcCcHHHHHHhhcC-CCHHHHHHHHHHHHHhc
Q 014196 91 MAAKEIEKLAKED-VKIKKLMAELGVIQMLVSMVST-EVIGRRRAAIKALIQLA 142 (429)
Q Consensus 91 ~Aa~~L~~La~~~-~~~r~~i~~~G~i~~Lv~lL~s-~~~~~~~~A~~aL~nLa 142 (429)
.|+..|-.+.+.. ......+.....+..|+.++.. .++.+++.++..+...+
T Consensus 64 ~aL~LLe~~vkNcG~~f~~eias~~fl~~l~~l~~~~~~~~Vk~kil~li~~W~ 117 (226)
T 3zyq_A 64 YALEVMESVVKNCGQTVHDEVANKQTMEELKDLLKRQVEVNVRNKILYLIQAWA 117 (226)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHSSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcchHHHHhhccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHH
Confidence 9999999888754 3356677777777888888864 56889999988888775
No 130
>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B
Probab=81.43 E-value=40 Score=32.54 Aligned_cols=135 Identities=17% Similarity=0.150 Sum_probs=85.0
Q ss_pred cCcHHHHHHhhcC-----------CCHHHHHHHHHHHHHhccCCCchHHHHH-hcCccchhhhhccCCCHHHHHHHHHHH
Q 014196 113 LGVIQMLVSMVST-----------EVIGRRRAAIKALIQLANGTYTNKAIMV-EAGILTKLPKNVDAVDESTRHEFGELL 180 (429)
Q Consensus 113 ~G~i~~Lv~lL~s-----------~~~~~~~~A~~aL~nLa~~~~~nk~~iv-~~G~i~~Lv~lL~~~~~~~~~~aa~~L 180 (429)
.||+..|+.+|.. .+...+..++.+|..|.... .....+. ..+++..|+..+.+....++..+..+|
T Consensus 46 ~~Gl~~Ll~~L~~~~~~~~~~~~~~d~~~~~~~l~CLkalmN~~-~Gl~~vl~~~~~i~~l~~sL~s~~~~~r~~vleLL 124 (386)
T 2bnx_A 46 AEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNK-FGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLL 124 (386)
T ss_dssp HHHHHHHHHHHHHHHTCCTTTCCTTHHHHHHHHHHHHHHHTSSH-HHHHHHHHSSSHHHHHHHTCCTTSHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhCCH-HHHHHHHcCcHHHHHHHHHhCCCCchHHHHHHHHH
Confidence 6788888888752 14567788888888887664 3455555 457888888888877788888888788
Q ss_pred HHhhccCC--C-cccc----------ccCCcHHHHHHhhhcCCcHHHHHHHHHHHHH-hccCCCC-------hhHHHhcC
Q 014196 181 LSLSSLAN--T-HIPL----------SSSEILPFLVGILESGSSVETKELCIGALYN-LSAVLDN-------ARPMVSNG 239 (429)
Q Consensus 181 ~~Ls~~~~--~-~~~i----------~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~n-Ls~~~~n-------~~~iv~~G 239 (429)
..+|..+. . ...+ .+..-...||..+.+++..+.+. ++..+.| |...+++ +..+...|
T Consensus 125 ~alc~~~~~~G~~~~VL~Al~~~~~~~e~~RF~~lv~~l~~~~~~e~~~-a~m~lIN~lv~~~~dl~~R~~LR~Ef~~~G 203 (386)
T 2bnx_A 125 SALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKV-GCLQLINALITPAEELDFRVHIRSELMRLG 203 (386)
T ss_dssp HHHHTCCSSTTHHHHHHHHHHHHHHHHTSCTTHHHHHHTSTTSCHHHHH-HHHHHHHHHHTTCSCHHHHHHHHHHHHHTT
T ss_pred HHHHcCCCCCChHHHHHHHHHHHHHhCchhhHHHHHHHHHcCChHHHHH-HHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
Confidence 88886653 2 2222 13345567888887655545655 4444555 4444544 23445556
Q ss_pred cHHHHHHhccC
Q 014196 240 VVHTLLKLCSM 250 (429)
Q Consensus 240 ~v~~Lv~lL~~ 250 (429)
..+. +.-|+.
T Consensus 204 L~~i-l~~Lr~ 213 (386)
T 2bnx_A 204 LHQV-LQELRE 213 (386)
T ss_dssp HHHH-HHHHTT
T ss_pred hHHH-HHHHhc
Confidence 5544 455554
No 131
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A*
Probab=80.95 E-value=38 Score=32.03 Aligned_cols=202 Identities=14% Similarity=0.107 Sum_probs=136.2
Q ss_pred HHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccC-CCccccc-----cCCcHHHHHHhhhcCCcHHHHHHHHHHHH
Q 014196 150 AIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLA-NTHIPLS-----SSEILPFLVGILESGSSVETKELCIGALY 223 (429)
Q Consensus 150 ~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~-~~~~~i~-----~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~ 223 (429)
+.+...+.+..|+..|...+-+.|..++.+..++-... +.+.... ....+..|+.--.+.+ +--.+-..|.
T Consensus 72 ~ei~~~dll~~Li~~l~~L~fE~RKd~~~if~~llr~~~~~~~p~v~Yl~~~peil~~L~~gYe~~d---iAl~~G~mLR 148 (341)
T 1upk_A 72 QELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQNILFMLLKGYESPE---IALNCGIMLR 148 (341)
T ss_dssp HHHHHHSHHHHHHHTGGGSCHHHHHHHHHHHHHHHTCCBTTBCHHHHHHHTCTHHHHHHHHGGGSTT---THHHHHHHHH
T ss_pred HHHHHhCHHHHHHHhcccCCchhhccHHHHHHHHHhcccCCCCchhHHHHcCHHHHHHHHHhhccch---hHhHHHHHHH
Confidence 45666788888999999999999999988877776433 2222111 1222233332222222 2333444555
Q ss_pred HhccCCCChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHh-hCChhcHHHHhcC--CCChHHHHHhcccCCChhHHH
Q 014196 224 NLSAVLDNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNL-VVTSTGKKAMEDS--PLVPESLIEILTWEEKPKCQE 299 (429)
Q Consensus 224 nLs~~~~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~L-a~~~e~~~~i~~~--~~i~~~Lv~~L~~~~s~~~~e 299 (429)
....+..-...+...+.+-.+.+.+..+. ++...|..++..| ..+......+... ..+....-++|. +++-..+.
T Consensus 149 ecir~e~la~~iL~~~~f~~fF~yv~~~~FdiasDAf~TfkelLt~Hk~lvaefL~~nyd~Ff~~y~~Ll~-S~NYVTkR 227 (341)
T 1upk_A 149 ECIRHEPLAKIILWSEQFYDFFRYVEMSTFDIASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLH-SENYVTKR 227 (341)
T ss_dssp HHHTSHHHHHHHHHSGGGGHHHHHTTCSSHHHHHHHHHHHHHHHHSSHHHHHHHHHHTHHHHHHHHHHHTT-CSSHHHHH
T ss_pred HHHHhHHHHHHHhccHHHHHHHHHhcCCCchHHHHHHHHHHHHHhccHHHHHHHHHHhHHHHHHHHHHHhc-CCcchhHH
Confidence 55566666677888888888888888777 8999999999854 4455444444332 233335666777 78999999
Q ss_pred HHHHHHHHHhhC--CHHHHHHHHhC-CchHHHHHHhhcCCHHHHHHHHHHHHHHHhccc
Q 014196 300 LSAYILMILAHQ--SSEQRDKMAKS-GIVHVSLQLALLGSPLAQRRASKLLQWFKDERQ 355 (429)
Q Consensus 300 ~A~~~L~~L~~~--~~~~~~~i~~~-G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~~~~ 355 (429)
.++..|+.+--. +......-+.. .-+..++.+|++.+..+|-.|-.+.+.+-..|+
T Consensus 228 QSlKLLgelLldr~N~~vM~~Yis~~~nLkl~M~LL~d~sk~Iq~EAFhVFKvFVANP~ 286 (341)
T 1upk_A 228 QSLKLLGELLLDRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPN 286 (341)
T ss_dssp HHHHHHHHHHHSGGGHHHHHHHTTCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHhCchHHHHHHHHhCCHHHHHHHHHHhcCchhchhhhhhhheeeeeeCCC
Confidence 999999988653 34444444443 356777888899999999999999999998664
No 132
>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans}
Probab=80.72 E-value=7.8 Score=35.58 Aligned_cols=102 Identities=10% Similarity=0.041 Sum_probs=73.6
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHH
Q 014196 71 CVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKA 150 (429)
Q Consensus 71 ~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~ 150 (429)
...+|.++..+..+...++..+-..++.+..-.+. ..+.+.++.-+++.+..+++.++..+..+-......
T Consensus 131 ~~~lP~LveKlGd~k~~vR~~~r~il~~l~~v~~~-------~~v~~~l~~g~ksKN~R~R~e~l~~l~~li~~~G~~-- 201 (266)
T 2of3_A 131 SAFVPYLLLKTGEAKDNMRTSVRDIVNVLSDVVGP-------LKMTPMLLDALKSKNARQRSECLLVIEYYITNAGIS-- 201 (266)
T ss_dssp HHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHCH-------HHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHCSG--
T ss_pred HHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHCCH-------HHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhcCCC--
Confidence 56789999999887777777666666666542211 224667888889999999999998888874332111
Q ss_pred HHHhcCcc---chhhhhccCCCHHHHHHHHHHHHHhh
Q 014196 151 IMVEAGIL---TKLPKNVDAVDESTRHEFGELLLSLS 184 (429)
Q Consensus 151 ~iv~~G~i---~~Lv~lL~~~~~~~~~~aa~~L~~Ls 184 (429)
...++ |.+..++...+..+|..|..++..+-
T Consensus 202 ---~~~~l~~~~~ia~ll~D~d~~VR~aAl~~lve~y 235 (266)
T 2of3_A 202 ---PLKSLSVEKTVAPFVGDKDVNVRNAAINVLVACF 235 (266)
T ss_dssp ---GGGGGCHHHHHGGGGGCSSHHHHHHHHHHHHHHH
T ss_pred ---ccccccchHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 24578 88999999999999988877766554
No 133
>3c2g_A SYS-1 protein; beta-catenin, phylogeny, SYS-1, developmental protein, DNA-binding, nucleus; 2.50A {Caenorhabditis elegans} PDB: 3c2h_A*
Probab=77.54 E-value=19 Score=34.50 Aligned_cols=129 Identities=10% Similarity=0.025 Sum_probs=93.7
Q ss_pred HHHhccCCCCh-hHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCChhcHHHHhcCCCChHHHHHhcccCCChhHHH
Q 014196 222 LYNLSAVLDNA-RPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEILTWEEKPKCQE 299 (429)
Q Consensus 222 L~nLs~~~~n~-~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e 299 (429)
|.||-.|+.|. .-+|.+++|..+...+.-+. ++.+..+..|...+....... .+-....|-++..++.++..+..-
T Consensus 266 LL~LLmHdSnAIDGFVk~DGv~~I~TvinYpN~~l~RaG~KLLLQVSDaksL~~--t~L~e~LPFi~~~i~~h~eDdvvY 343 (619)
T 3c2g_A 266 LLGLLLHDSDAIDGFVRSDGVGAITTVVQYPNNDLIRAGCKLLLQVSDAKALAK--TPLENILPFLLRLIEIHPDDEVIY 343 (619)
T ss_dssp HHHHHCCSHHHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHTTCGGGGT--SCCTTHHHHHHHHHHHCCCHHHHH
T ss_pred HHHHHhcccccccceeecccceeEEEEeecCCcHHHHhhhheeeeecchHHHhh--ccccccchHHHHHhccCCCcceEE
Confidence 56777777665 67899999999998887654 888888888877765322111 222333457777777678888888
Q ss_pred HHHHHHHHHhhCCHHHHHHHHhCCchHHHHHHhhcCC-------HHHHHHHHHHHHHHHh
Q 014196 300 LSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGS-------PLAQRRASKLLQWFKD 352 (429)
Q Consensus 300 ~A~~~L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~~~-------~~~k~~A~~lL~~l~~ 352 (429)
...+.|.++.++...+.+..+..|+++.|.......+ ..-|+.|+.++.+.-+
T Consensus 344 SGTGFLSNVVAHKq~VKelAI~~nAI~LLh~~I~ky~~Lsdf~ea~Kkk~aC~IicN~LR 403 (619)
T 3c2g_A 344 SGTGFLSNVVAHKQHVKDIAIRSNAIFLLHTIISKYPRLDELTDAPKRNRVCEIICNCLR 403 (619)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHTTHHHHHHHHHHTSCCGGGCCSHHHHHHHHHHHHHHHH
T ss_pred ecchHHHHHHhcccchHHHHhccCcHHHHHHHHhhCCChhhhhhhhhhcchHHHHHHHHH
Confidence 8999999999887889999999999999998876432 2346777777655443
No 134
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=76.94 E-value=4.2 Score=39.51 Aligned_cols=118 Identities=14% Similarity=0.098 Sum_probs=80.7
Q ss_pred hHHHhcCcHHHHHHhccC-----------Cc-chHHHHHHHHHHhhCChhcHHHHhcCCCChHHHHHhcccCCChhHHHH
Q 014196 233 RPMVSNGVVHTLLKLCSM-----------KE-RLSEKSLATLGNLVVTSTGKKAMEDSPLVPESLIEILTWEEKPKCQEL 300 (429)
Q Consensus 233 ~~iv~~G~v~~Lv~lL~~-----------~~-~~~~~a~~~L~~La~~~e~~~~i~~~~~i~~~Lv~~L~~~~s~~~~e~ 300 (429)
..++ .+|+..|+.+|.. .+ .....++.+|..+..+..|...+..+...+..|+..|. +.++.++..
T Consensus 104 ~~F~-~~Gl~~Ll~iL~~~~~~~~~~~~~~d~~~q~~~l~CLkalmN~~~G~~~vl~~~~~i~~l~~~L~-s~~~~~~~~ 181 (383)
T 3eg5_B 104 QTFG-AEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMD-PAVPNMMID 181 (383)
T ss_dssp HHHH-HHHHHHHHHHHHHHHTCC-------CHHHHHHHHHHHHHHTSSHHHHHHHHTCSSHHHHHHHTCC-TTSHHHHHH
T ss_pred HHHH-HccHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHHHHhcchhhHHHHHcChHHHHHHHHHhC-CCchHHHHH
Confidence 4455 6677888887741 12 55667888999999999999999999888888999988 788899999
Q ss_pred HHHHHHHHhhCCH-HH-HHHH----------HhCCchHHHHHHhhcC-CHHHHHHHHHHHHHHHh
Q 014196 301 SAYILMILAHQSS-EQ-RDKM----------AKSGIVHVSLQLALLG-SPLAQRRASKLLQWFKD 352 (429)
Q Consensus 301 A~~~L~~L~~~~~-~~-~~~i----------~~~G~v~~L~~ll~~~-~~~~k~~A~~lL~~l~~ 352 (429)
+..+|..+|..+. +. ...+ .+..-+..++..+..+ +...+..+..++-.+-.
T Consensus 182 aleLL~~lc~~~~~~gG~~~VL~Al~~~~~~~e~~RF~~lv~~L~~~~~~e~~~~~m~lIN~li~ 246 (383)
T 3eg5_B 182 AAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINALIT 246 (383)
T ss_dssp HHHHHHHHHTCCSSTTHHHHHHHHHHHHHHHHTSCTTHHHHHTTSTTSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCcCcCCcHHHHHHHHHHHHHhCCCCcHHHHHHHHHccCcHHHHHHHHHHHHHHHc
Confidence 9999999997532 11 2222 2234466677777653 44444444444444443
No 135
>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B
Probab=76.27 E-value=25 Score=33.96 Aligned_cols=126 Identities=11% Similarity=0.068 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHhccCCCChhHHHhc-CcHHHHHHhccCCc-chHHHHHHHHHHhhCCh--hc-HHHHhc---------C
Q 014196 213 ETKELCIGALYNLSAVLDNARPMVSN-GVVHTLLKLCSMKE-RLSEKSLATLGNLVVTS--TG-KKAMED---------S 278 (429)
Q Consensus 213 ~~~~~A~~aL~nLs~~~~n~~~iv~~-G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~--e~-~~~i~~---------~ 278 (429)
.....++.+|..|..+......++.. +++..|...|..+. .++..++.+|..+|..+ +| ...|.+ .
T Consensus 73 ~~~~~~l~CLkalmN~~~Gl~~vl~~~~~i~~l~~sL~s~~~~~r~~vleLL~alc~~~~~~G~~~~VL~Al~~~~~~~e 152 (386)
T 2bnx_A 73 RNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDE 152 (386)
T ss_dssp HHHHHHHHHHHHHTSSHHHHHHHHHSSSHHHHHHHTCCTTSHHHHHHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHcCcHHHHHHHHHhCCCCchHHHHHHHHHHHHHcCCCCCChHHHHHHHHHHHHHhCc
Confidence 45667888998888776666666554 78888888886554 67778888898888754 36 444432 1
Q ss_pred CCChHHHHHhcccCCChhHHHHHHHHHHH-HhhC--CH----HHHHHHHhCCchHHHHHHhhcCCHHH
Q 014196 279 PLVPESLIEILTWEEKPKCQELSAYILMI-LAHQ--SS----EQRDKMAKSGIVHVSLQLALLGSPLA 339 (429)
Q Consensus 279 ~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~-L~~~--~~----~~~~~i~~~G~v~~L~~ll~~~~~~~ 339 (429)
..-...||+.+..+.+...+. ++..|.| +... +- ..|..+...|..+.|-.+-..+++..
T Consensus 153 ~~RF~~lv~~l~~~~~~e~~~-a~m~lIN~lv~~~~dl~~R~~LR~Ef~~~GL~~il~~Lr~~~~~~L 219 (386)
T 2bnx_A 153 VERFQPLLDGLKSGTSIALKV-GCLQLINALITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDM 219 (386)
T ss_dssp SCTTHHHHHHTSTTSCHHHHH-HHHHHHHHHHTTCSCHHHHHHHHHHHHHTTHHHHHHHHTTCCCHHH
T ss_pred hhhHHHHHHHHHcCChHHHHH-HHHHHHHHHHCCCCCHHHHHHHHHHHHHCChHHHHHHHhccCChhH
Confidence 222346888886323333332 2333333 3332 22 46778888896666554443355443
No 136
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}
Probab=75.99 E-value=91 Score=33.61 Aligned_cols=171 Identities=12% Similarity=0.029 Sum_probs=90.7
Q ss_pred CHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhh-----cCCcHHHHHHHHHHHHHhccCCCChhHHHhcCcHHH
Q 014196 169 DESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILE-----SGSSVETKELCIGALYNLSAVLDNARPMVSNGVVHT 243 (429)
Q Consensus 169 ~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~-----~~~~~~~~~~A~~aL~nLs~~~~n~~~iv~~G~v~~ 243 (429)
+...++.+..++..++...... ....++.++.++. +.+ +.++..++++|..++..-....... ..+++.
T Consensus 477 ~w~~~eaal~~l~~iae~~~~~----~~~~l~~l~~~l~~l~~~d~~-~~vr~~a~~~l~~~~~~l~~~~~~l-~~vl~~ 550 (971)
T 2x1g_F 477 HWTKLEACIYSFQSVAEHFGGE----EKRQIPRLMRVLAEIPYEKLN-VKLLGTALETMGSYCNWLMENPAYI-PPAINL 550 (971)
T ss_dssp CCHHHHHHHHHHHHTTTC----------CHHHHHHHHHHHSCTTTSC-HHHHHHHHHHHHHTHHHHC----CH-HHHHHH
T ss_pred cHHHHHHHHHHHHHHHhhcChh----hhHHHHHHHHHHHhcCccccC-HHHHHHHHHHHHHHHHHHhcCHHHH-HHHHHH
Confidence 3445666666777776432111 1234566665542 124 3789999999999886321111111 134566
Q ss_pred HHHhccCCcchHHHHHHHHHHhhCChhcHHHHhcC-CCChHHHHHhcccC--CChhHHHHHHHHHHHHhhCC--HHHHHH
Q 014196 244 LLKLCSMKERLSEKSLATLGNLVVTSTGKKAMEDS-PLVPESLIEILTWE--EKPKCQELSAYILMILAHQS--SEQRDK 318 (429)
Q Consensus 244 Lv~lL~~~~~~~~~a~~~L~~La~~~e~~~~i~~~-~~i~~~Lv~~L~~~--~s~~~~e~A~~~L~~L~~~~--~~~~~~ 318 (429)
|+..| + ..++..|+.++.+++. +.+..+... +.+...|.+++. . .....++....+++.++..- ++....
T Consensus 551 l~~~l-~-~~v~~~A~~al~~l~~--~~~~~l~p~~~~ll~~l~~~l~-~~~~~~~~~~~~~~ai~~i~~~~~~~~~~~~ 625 (971)
T 2x1g_F 551 LVRGL-N-SSMSAQATLGLKELCR--DCQLQLKPYADPLLNACHASLN-TGRMKNSDSVRLMFSIGKLMSLLRPEEIPKY 625 (971)
T ss_dssp HHHHH-H-SSCHHHHHHHHHHHHH--HCHHHHHHHHHHHHHHHHHHHH-STTSCHHHHHHHHHHHHHHHHTSCTTHHHHH
T ss_pred HHHHh-C-hHHHHHHHHHHHHHHH--HHHHhccccHHHHHHHHHHHHc-CCCCChHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 66666 3 4889999999999984 333444321 223334455565 3 24677888888888887632 222222
Q ss_pred HHhCCchHHHHHHh----hcC--CHHHHHHHHHHHHHHHh
Q 014196 319 MAKSGIVHVSLQLA----LLG--SPLAQRRASKLLQWFKD 352 (429)
Q Consensus 319 i~~~G~v~~L~~ll----~~~--~~~~k~~A~~lL~~l~~ 352 (429)
+. ..+++++..+ ... ++..+......|..+..
T Consensus 626 ~~--~ll~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~L~~ 663 (971)
T 2x1g_F 626 LD--IIVSPCFEELQAICQADSKTPAARIRTIFRLNMIST 663 (971)
T ss_dssp HH--HHHHHHHHHHHHHHTC---CHHHHHHHHHHHHHHHH
T ss_pred HH--HHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHH
Confidence 21 2344444433 332 34345555556655553
No 137
>3thg_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; four-helix bundle, rubisco reactivation, chloroplast stroma, ATPase; 1.88A {Larrea tridentata}
Probab=75.44 E-value=2.2 Score=33.13 Aligned_cols=42 Identities=10% Similarity=0.331 Sum_probs=28.4
Q ss_pred hhhhhhHH-HHHHHHh-ccc-------cccCCCCCCCcccchhhHHHHHHHH
Q 014196 9 MRLQFFSR-IRQFIQS-KSA-------RRRQNEPNHNHEKSRTLKNINCQEE 51 (429)
Q Consensus 9 ~~~~TydR-Ie~W~~~-g~~-------~T~~~L~~~~L~PN~~Lr~lI~~W~ 51 (429)
.|..|||. |.+|+.+ |.. -.+...+.++ .|+.||.+||+.-.
T Consensus 46 LRsR~YDd~Vr~wI~~vG~e~ig~~Lvns~e~~P~F~-~P~~tl~~Lle~G~ 96 (107)
T 3thg_A 46 LRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPSFE-QPKMTIDKLLGYGG 96 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCC-CCCCCHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHhCHHHHhHHHHcCCCCCCCCC-CCcCCHHHHHHHHH
Confidence 46689999 9999965 321 2333344433 79999999997543
No 138
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=73.90 E-value=1.3 Score=37.56 Aligned_cols=45 Identities=11% Similarity=0.060 Sum_probs=34.3
Q ss_pred hhhhhhHH--HHHHHHhccc---cccCCCC-CCCcccchhhHHHHHHHHHh
Q 014196 9 MRLQFFSR--IRQFIQSKSA---RRRQNEP-NHNHEKSRTLKNINCQEEKQ 53 (429)
Q Consensus 9 ~~~~TydR--Ie~W~~~g~~---~T~~~L~-~~~L~PN~~Lr~lI~~W~~~ 53 (429)
-=|++|=+ |++|+..++. ..+.++. ...+.||..|+++|..|...
T Consensus 72 ~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~l~~~~~l~~~i~~~~~~ 122 (165)
T 2ckl_B 72 ECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPS 122 (165)
T ss_dssp TTCCEEEHHHHHHHHHTTCCBCTTTCCBCCSGGGEEECHHHHHHHHHHC--
T ss_pred CCCChhHHHHHHHHHHhCcCCCCCCCCcCCCcccCCcCHHHHHHHHHHHcc
Confidence 34789999 9999987543 6777774 34699999999999998653
No 139
>3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A
Probab=73.51 E-value=33 Score=34.17 Aligned_cols=117 Identities=15% Similarity=0.272 Sum_probs=74.9
Q ss_pred cCCcHHHHHHHHHHHHHhccCCCChhHHHhcCcHHHHHHhccCCc-chHHHHHHHHHHhhCChhcHHHHhcCCCChHHHH
Q 014196 208 SGSSVETKELCIGALYNLSAVLDNARPMVSNGVVHTLLKLCSMKE-RLSEKSLATLGNLVVTSTGKKAMEDSPLVPESLI 286 (429)
Q Consensus 208 ~~~~~~~~~~A~~aL~nLs~~~~n~~~iv~~G~v~~Lv~lL~~~~-~~~~~a~~~L~~La~~~e~~~~i~~~~~i~~~Lv 286 (429)
.|+. +.|+-|+.-+...-.+=.+. ...++..+++|..|.+ .++..|+.-|-.+|.. +....|++ .|+
T Consensus 39 kg~~-k~K~LaaQ~I~kffk~FP~l----~~~Ai~a~lDLcEDed~~IR~qaik~Lp~~ck~-~~i~kiaD------vL~ 106 (507)
T 3u0r_A 39 KGGT-KEKRLAAQFIPKFFKHFPEL----ADSAINAQLDLCEDEDVSIRRQAIKELPQFATG-ENLPRVAD------ILT 106 (507)
T ss_dssp GSCH-HHHHHHHHHHHHHGGGCGGG----HHHHHHHHHHHHTCSSHHHHHHHHHHGGGGCCT-TCHHHHHH------HHH
T ss_pred CCCH-HHHHHHHHHHHHHHhhChhh----HHHHHHHHHHHHhcccHHHHHHHHHhhHHHhhh-hhhhhHHH------HHH
Confidence 3454 67777777777665532222 1345778888888776 7888888888888887 55555544 788
Q ss_pred HhcccCCChhHHHHHHHHHHHHhhCCHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHH
Q 014196 287 EILTWEEKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASK 345 (429)
Q Consensus 287 ~~L~~~~s~~~~e~A~~~L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~ 345 (429)
++|. .+.+......-.+|+.+-..++. |.+..|..-+..|++.+|+++-.
T Consensus 107 QlLq-tdd~~E~~~V~~sL~sllk~Dpk--------~tl~~lf~~i~~~~e~~Rer~lk 156 (507)
T 3u0r_A 107 QLLQ-TDDSAEFNLVNNALLSIFKMDAK--------GTLGGLFSQILQGEDIVRERAIK 156 (507)
T ss_dssp HHTT-CCCHHHHHHHHHHHHHHHHHCHH--------HHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHh-ccchHHHHHHHHHHHHHHhcChH--------HHHHHHHHHHcccchHHHHHHHH
Confidence 8888 56666555555666665554432 23455555555566777766544
No 140
>1lsh_A Lipovitellin (LV-1N, LV-1C); vitellogenin, lipoprotein, plasma apolipoprote apolipoprotein B, APOB; HET: PLD UPL; 1.90A {Ichthyomyzon unicuspis} SCOP: a.118.4.1 f.7.1.1 f.7.1.1
Probab=67.52 E-value=1.5e+02 Score=32.61 Aligned_cols=131 Identities=12% Similarity=0.070 Sum_probs=81.9
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcC-------CCHHHHHHHHHHHHHhccCC
Q 014196 73 LLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVST-------EVIGRRRAAIKALIQLANGT 145 (429)
Q Consensus 73 ~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s-------~~~~~~~~A~~aL~nLa~~~ 145 (429)
....+.+.+..++.+.+.-++.+|.++... ..++.|..++.. ....++.+|+++|.+++...
T Consensus 441 i~~~l~~~~~~~~~~~~~~~LkaLGN~g~p-----------~~l~~l~~~l~~~~~~~~~~~~rvr~aAi~ALr~~~~~~ 509 (1056)
T 1lsh_A 441 LHDLLSQSSDRAKEEEIVLALKALGNAGQP-----------NSIKKIQRFLPGQGKSLDEYSTRVQAEAIMALRNIAKRD 509 (1056)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHTCG-----------GGHHHHHTTSTTSSSCCCCSCHHHHHHHHHTTTTGGGTC
T ss_pred HHHHHHHHHhcCChHHHHHHHHHhhccCCh-----------hHHHHHHHhhcCccccccccchHHHHHHHHHHHHhhhhc
Confidence 344455555666777777788888877642 247777777742 23578899999999998664
Q ss_pred CchHHHHHhcCccchhhhhcc--CCCHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcCCcHHHHHHHHHHHH
Q 014196 146 YTNKAIMVEAGILTKLPKNVD--AVDESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESGSSVETKELCIGALY 223 (429)
Q Consensus 146 ~~nk~~iv~~G~i~~Lv~lL~--~~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~aL~ 223 (429)
+ ..+. +.+..+.. ..+.+.|..|..+|..-. +. ...+..++..+......++.......|.
T Consensus 510 p---~~v~-----~il~~i~~n~~e~~EvRiaA~~~Lm~t~--P~-------~~~l~~ia~~l~~E~~~QV~sfv~S~l~ 572 (1056)
T 1lsh_A 510 P---RKVQ-----EIVLPIFLNVAIKSELRIRSCIVFFESK--PS-------VALVSMVAVRLRREPNLQVASFVYSQMR 572 (1056)
T ss_dssp H---HHHH-----HHHHHHHHCTTSCHHHHHHHHHHHHHTC--CC-------HHHHHHHHHHHTTCSCHHHHHHHHHHHH
T ss_pred h---HHHH-----HHHHHHhcCCCCChHHHHHHHHHHHHHC--cC-------HHHHHHHHHHHhhCchHHHHHHHHHHHH
Confidence 2 1111 12345553 334777766655554321 11 1235677777777555588888889999
Q ss_pred HhccCCCC
Q 014196 224 NLSAVLDN 231 (429)
Q Consensus 224 nLs~~~~n 231 (429)
+++....-
T Consensus 573 sla~s~~P 580 (1056)
T 1lsh_A 573 SLSRSSNP 580 (1056)
T ss_dssp HHTTCCSG
T ss_pred HHHhcCCc
Confidence 99976543
No 141
>1elk_A Target of MYB1; superhelix of helices, endocytosis/exocytosis complex; 1.50A {Homo sapiens} SCOP: a.118.9.2
Probab=65.43 E-value=26 Score=29.22 Aligned_cols=114 Identities=18% Similarity=0.135 Sum_probs=77.4
Q ss_pred hhhhH-HHHHHHHhccccccCCCCCCCcccchhhHHHHHHHHHhhcccccCCCCCCCChhhHHHHHHHHHHhc-CCCHHH
Q 014196 11 LQFFS-RIRQFIQSKSARRRQNEPNHNHEKSRTLKNINCQEEKQVIIEEKNHEQSDIEEDDCVLLQKSVKRLH-FGSWEE 88 (429)
Q Consensus 11 ~~Tyd-RIe~W~~~g~~~T~~~L~~~~L~PN~~Lr~lI~~W~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~L~-~~~~~~ 88 (429)
|..|. -+++|++.- |...+.+ ||.++ |.+-|.... . .+ ......+..+.++|+ .+++.+
T Consensus 10 ~~p~~s~~~~~IekA---Ts~~l~~----~Dw~~---~leicD~I~--~---~~----~~~k~a~ral~krl~~~~n~~v 70 (157)
T 1elk_A 10 GNPFSSPVGQRIEKA---TDGSLQS----EDWAL---NMEICDIIN--E---TE----EGPKDALRAVKKRIVGNKNFHE 70 (157)
T ss_dssp SCGGGSHHHHHHHHH---TCTTCSS----CCHHH---HHHHHHHHH--H---SS----SHHHHHHHHHHHHHTTCCCHHH
T ss_pred CCCCCcHHHHHHHHH---cCCCCCC----cCHHH---HHHHHHHHh--C---CC----ccHHHHHHHHHHHhccCCCHHH
Confidence 45554 266666543 5555554 67663 566665320 0 11 134677889999998 478999
Q ss_pred HHHHHHHHHHHhhhc-hHHHHHHHhcCcHHH-HHHhhcC---CCHHHHHHHHHHHHHhcc
Q 014196 89 KEMAAKEIEKLAKED-VKIKKLMAELGVIQM-LVSMVST---EVIGRRRAAIKALIQLAN 143 (429)
Q Consensus 89 ~~~Aa~~L~~La~~~-~~~r~~i~~~G~i~~-Lv~lL~s---~~~~~~~~A~~aL~nLa~ 143 (429)
+..|+..|-.+.+.. +.....+.....+.- |+.++.. .+..+++.++..+...+.
T Consensus 71 ~l~AL~LLd~~vkNcG~~fh~eva~~~fl~e~Lvk~~~~k~~~~~~Vk~kil~li~~W~~ 130 (157)
T 1elk_A 71 VMLALTVLETCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNLIQSWAD 130 (157)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHTHHHHSTTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHhhHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHHH
Confidence 999999999888764 556677877788887 8888843 346889988888877653
No 142
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=65.05 E-value=1.7 Score=34.52 Aligned_cols=43 Identities=9% Similarity=-0.135 Sum_probs=35.4
Q ss_pred hhhhhhHH--HHHHHHhcc-c--cccCCCCCCCcccchhhHHHHHHHH
Q 014196 9 MRLQFFSR--IRQFIQSKS-A--RRRQNEPNHNHEKSRTLKNINCQEE 51 (429)
Q Consensus 9 ~~~~TydR--Ie~W~~~g~-~--~T~~~L~~~~L~PN~~Lr~lI~~W~ 51 (429)
-=|++|-+ |++|+..+. . ..++++...++.||..+++.|..+.
T Consensus 35 ~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~l~~~i~~l~ 82 (118)
T 3hct_A 35 PCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFAKREILSLM 82 (118)
T ss_dssp TTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGGCEECHHHHHHHHTSE
T ss_pred CcCChhhHHHHHHHHhhCCCCCCCCCCCcCHHhcccCHHHHHHHccce
Confidence 35789989 999998765 4 7788887778999999999998754
No 143
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=64.26 E-value=1.7 Score=34.45 Aligned_cols=51 Identities=12% Similarity=-0.031 Sum_probs=38.6
Q ss_pred CCcchhhhhhhhHH--HHHHHHhccc-cccCCCCCCCcccchhhHHHHHHHHHhh
Q 014196 3 IPSSSYMRLQFFSR--IRQFIQSKSA-RRRQNEPNHNHEKSRTLKNINCQEEKQV 54 (429)
Q Consensus 3 ~~~~~~~~~~TydR--Ie~W~~~g~~-~T~~~L~~~~L~PN~~Lr~lI~~W~~~~ 54 (429)
.|+...-=|+||=+ |++|+. ... ..+.++....+.||..|+++|..|....
T Consensus 34 ~pv~~~~CgH~fC~~Ci~~~~~-~~CP~Cr~~~~~~~~~~n~~l~~l~~~~~~~~ 87 (117)
T 1jm7_B 34 EPVCLGGCEHIFCSNCVSDCIG-TGCPVCYTPAWIQDLKINRQLDSMIQLCSKLR 87 (117)
T ss_dssp SCBCCCSSSCCBCTTTGGGGTT-TBCSSSCCBCSCSSCCCCHHHHHHHHHHHHHH
T ss_pred CccEeCCCCCHHHHHHHHHHhc-CCCcCCCCcCccccccccHHHHHHHHHHHHHH
Confidence 34443245799998 999997 222 6777777778999999999999988644
No 144
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=64.22 E-value=1 Score=33.10 Aligned_cols=38 Identities=24% Similarity=0.135 Sum_probs=29.8
Q ss_pred hhhhhHH--HHHHHHhc-----cc---cccCCCCCCCcccchhhHHHH
Q 014196 10 RLQFFSR--IRQFIQSK-----SA---RRRQNEPNHNHEKSRTLKNIN 47 (429)
Q Consensus 10 ~~~TydR--Ie~W~~~g-----~~---~T~~~L~~~~L~PN~~Lr~lI 47 (429)
=|++|=+ |++|+... .. ..++++...++.||..|+++|
T Consensus 37 CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~~~n~~l~~~v 84 (85)
T 2ecw_A 37 CNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPFGNLKPNLHVANIV 84 (85)
T ss_dssp TSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCTTCCEECSCCCSSC
T ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCHHhCCcCHHHHHhh
Confidence 4789988 99999873 22 667777777899999988765
No 145
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B
Probab=63.08 E-value=1.1e+02 Score=33.53 Aligned_cols=221 Identities=14% Similarity=0.102 Sum_probs=118.9
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhc-CCCHHHHHHHHHHHHHhccC----
Q 014196 70 DCVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVS-TEVIGRRRAAIKALIQLANG---- 144 (429)
Q Consensus 70 ~~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~-s~~~~~~~~A~~aL~nLa~~---- 144 (429)
+...+..++..+.+++...|.+|-..|..+-+ ++ ++...+..+|. +.++.+|..|+..|.|....
T Consensus 14 ~~~~l~~~l~~~~~p~~~~r~~Ae~~L~~~~~-~p---------~~~~~l~~iL~~s~~~~vr~~aa~~Lk~~i~~~W~~ 83 (1049)
T 3m1i_C 14 DIALLDQVVSTFYQGSGVQQKQAQEILTKFQD-NP---------DAWQKADQILQFSTNPQSKFIALSILDKLITRKWKL 83 (1049)
T ss_dssp CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-ST---------TGGGGHHHHHHHCSCHHHHHHHHHHHHHHHHHTGGG
T ss_pred cHHHHHHHHHHHhCCChHHHHHHHHHHHHHHh-Cc---------hHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHhhCcc
Confidence 45567777777777777777777777776643 33 34555566664 45789999999999987532
Q ss_pred -CCchHHHHHhcCccchhhhhccCC-----CHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcCCcHHHHHHH
Q 014196 145 -TYTNKAIMVEAGILTKLPKNVDAV-----DESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESGSSVETKELC 218 (429)
Q Consensus 145 -~~~nk~~iv~~G~i~~Lv~lL~~~-----~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A 218 (429)
+++.|..|.+ ..+..+...-..+ +...+...+.++..++..+-.. .=.+.++.|++.+. .+. ..+..+
T Consensus 84 l~~~~~~~ir~-~ll~~l~~~~~~~~~~~~~~~i~~kl~~~ia~Ia~~~~p~---~Wp~ll~~L~~~~~-~~~-~~~~~~ 157 (1049)
T 3m1i_C 84 LPNDHRIGIRN-FVVGMIISMCQDDEVFKTQKNLINKSDLTLVQILKQEWPQ---NWPEFIPELIGSSS-SSV-NVCENN 157 (1049)
T ss_dssp SCHHHHHHHHH-HHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHTTT---TCTTHHHHHHHHHT-TCH-HHHHHH
T ss_pred CCHHHHHHHHH-HHHHHHHhhCCccccchhhHHHHHHHHHHHHHHHHHhCcc---cchHHHHHHHHHHc-cCh-HHHHHH
Confidence 2223444432 2222222211111 2344555666777776543110 11467899999986 333 456677
Q ss_pred HHHHHHhccC-----CCC----h-----hHHHhc--CcHHHHHHhccCC-c-chHHHHHHHHHHhhCChhcHHHHhcCCC
Q 014196 219 IGALYNLSAV-----LDN----A-----RPMVSN--GVVHTLLKLCSMK-E-RLSEKSLATLGNLVVTSTGKKAMEDSPL 280 (429)
Q Consensus 219 ~~aL~nLs~~-----~~n----~-----~~iv~~--G~v~~Lv~lL~~~-~-~~~~~a~~~L~~La~~~e~~~~i~~~~~ 280 (429)
+.+|..|+.. .+. + ..+.+. .+++.+..++.+. + .++..++.++......-. -..+.+ ..
T Consensus 158 l~~L~~l~eev~~~~~~~~~~~r~~~lk~~l~~~~~~i~~~~~~~l~~~~~~~~~~~aL~~l~~~l~wi~-~~~~~~-~~ 235 (1049)
T 3m1i_C 158 MIVLKLLSEEVFDFSAEQMTQAKALHLKNSMSKEFEQIFKLCFQVLEQGSSSSLIVATLESLLRYLHWIP-YRYIYE-TN 235 (1049)
T ss_dssp HHHHHHHHHHHHTSCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTTSC-THHHHS-SS
T ss_pred HHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhCC-HHHHhh-hh
Confidence 7777777631 110 1 112221 1223333444433 2 677888888876554221 122333 22
Q ss_pred ChHHHHHhcccCCChhHHHHHHHHHHHHhh
Q 014196 281 VPESLIEILTWEEKPKCQELSAYILMILAH 310 (429)
Q Consensus 281 i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~ 310 (429)
+...+.+.+. .++..++.|+.+|..+..
T Consensus 236 ll~~l~~~~l--~~~~~~~~a~~~L~~i~~ 263 (1049)
T 3m1i_C 236 ILELLSTKFM--TSPDTRAITLKCLTEVSN 263 (1049)
T ss_dssp HHHHHHTHHH--HSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhC--CCHhHHHHHHHHHHHHHh
Confidence 3333442222 256667777777776664
No 146
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=61.12 E-value=1.1 Score=32.94 Aligned_cols=38 Identities=16% Similarity=0.093 Sum_probs=29.3
Q ss_pred hhhhhHH--HHHHHHhc-----c-c--cccCCCCCCCcccchhhHHHH
Q 014196 10 RLQFFSR--IRQFIQSK-----S-A--RRRQNEPNHNHEKSRTLKNIN 47 (429)
Q Consensus 10 ~~~TydR--Ie~W~~~g-----~-~--~T~~~L~~~~L~PN~~Lr~lI 47 (429)
=|++|=+ |++|+... . . ..++++...++.||+.|+++|
T Consensus 37 CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~~~n~~l~~~v 84 (85)
T 2ecv_A 37 CGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRPNRHVANIV 84 (85)
T ss_dssp SSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCSSSCCCSCCCCCCC
T ss_pred CCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCHHhcCccHHHHHhh
Confidence 4788988 99999761 2 2 667777777899999988765
No 147
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=60.09 E-value=3.4 Score=32.12 Aligned_cols=45 Identities=9% Similarity=0.124 Sum_probs=36.3
Q ss_pred hhhhhhHH--HHHHHHhcc---c--cccCCCCCCCcccchhhHHHHHHHHHh
Q 014196 9 MRLQFFSR--IRQFIQSKS---A--RRRQNEPNHNHEKSRTLKNINCQEEKQ 53 (429)
Q Consensus 9 ~~~~TydR--Ie~W~~~g~---~--~T~~~L~~~~L~PN~~Lr~lI~~W~~~ 53 (429)
-=|++|=+ |++|+..+. . ..++++....+.||..+.++++.+...
T Consensus 38 ~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~~~~~~~l~~~~~~~~~~ 89 (112)
T 1jm7_A 38 KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQESTRFSQLVEELLKI 89 (112)
T ss_dssp TTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTTCBCCCSSSHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCHhhcCccHHHHHHHHHHHHH
Confidence 34789988 999998653 2 778888877999999999999888753
No 148
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B
Probab=59.53 E-value=40 Score=37.01 Aligned_cols=208 Identities=14% Similarity=0.124 Sum_probs=112.1
Q ss_pred cchhhHHHHHHHHHhhcccccCCCCCCCChhhHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHhhh-----chHHHHHHHh
Q 014196 39 KSRTLKNINCQEEKQVIIEEKNHEQSDIEEDDCVLLQKSVKRLH-FGSWEEKEMAAKEIEKLAKE-----DVKIKKLMAE 112 (429)
Q Consensus 39 PN~~Lr~lI~~W~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~L~-~~~~~~~~~Aa~~L~~La~~-----~~~~r~~i~~ 112 (429)
|+...|+-.++|...- .. .+. .+..+...|. +.+...|.-|+..|++..+. +++.|..+.+
T Consensus 28 p~~~~r~~Ae~~L~~~--~~---~p~--------~~~~l~~iL~~s~~~~vr~~aa~~Lk~~i~~~W~~l~~~~~~~ir~ 94 (1049)
T 3m1i_C 28 GSGVQQKQAQEILTKF--QD---NPD--------AWQKADQILQFSTNPQSKFIALSILDKLITRKWKLLPNDHRIGIRN 94 (1049)
T ss_dssp CCHHHHHHHHHHHHHH--HH---STT--------GGGGHHHHHHHCSCHHHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHH--Hh---Cch--------HHHHHHHHHhhCCCHHHHHHHHHHHHHHHHhhCccCCHHHHHHHHH
Confidence 4445677777777543 11 011 1222333333 44788899999999987653 2344555443
Q ss_pred cCcHHHHHHhhcCC-----CHHHHHHHHHHHHHhccCCCchHHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccC
Q 014196 113 LGVIQMLVSMVSTE-----VIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLA 187 (429)
Q Consensus 113 ~G~i~~Lv~lL~s~-----~~~~~~~A~~aL~nLa~~~~~nk~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~ 187 (429)
. .+..+...-..+ ++.++.....++..++..+-... . .+.++.|+.+++ .+...++.+..+|..|+..-
T Consensus 95 ~-ll~~l~~~~~~~~~~~~~~~i~~kl~~~ia~Ia~~~~p~~-W---p~ll~~L~~~~~-~~~~~~~~~l~~L~~l~eev 168 (1049)
T 3m1i_C 95 F-VVGMIISMCQDDEVFKTQKNLINKSDLTLVQILKQEWPQN-W---PEFIPELIGSSS-SSVNVCENNMIVLKLLSEEV 168 (1049)
T ss_dssp H-HHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHTTTT-C---TTHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHhhCCccccchhhHHHHHHHHHHHHHHHHHhCccc-c---hHHHHHHHHHHc-cChHHHHHHHHHHHHHHHHH
Confidence 2 223332221111 35677777777777776531110 0 245666777765 34444555566666665221
Q ss_pred -CC-c------------ccccc--CCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCCCChhHHHhcCcHHHHHH-hccC
Q 014196 188 -NT-H------------IPLSS--SEILPFLVGILESGSSVETKELCIGALYNLSAVLDNARPMVSNGVVHTLLK-LCSM 250 (429)
Q Consensus 188 -~~-~------------~~i~~--~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~n~~~iv~~G~v~~Lv~-lL~~ 250 (429)
+. . ..+.. ...+..+..++.......++..++.++.+....-. ...+.+...++.+.+ ++.
T Consensus 169 ~~~~~~~~~~~r~~~lk~~l~~~~~~i~~~~~~~l~~~~~~~~~~~aL~~l~~~l~wi~-~~~~~~~~ll~~l~~~~l~- 246 (1049)
T 3m1i_C 169 FDFSAEQMTQAKALHLKNSMSKEFEQIFKLCFQVLEQGSSSSLIVATLESLLRYLHWIP-YRYIYETNILELLSTKFMT- 246 (1049)
T ss_dssp HTSCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTTSC-THHHHSSSHHHHHHTHHHH-
T ss_pred HHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhCC-HHHHhhhhHHHHHHHHhCC-
Confidence 11 0 11211 11234445555544333678889999987655332 334566777777774 443
Q ss_pred CcchHHHHHHHHHHhhC
Q 014196 251 KERLSEKSLATLGNLVV 267 (429)
Q Consensus 251 ~~~~~~~a~~~L~~La~ 267 (429)
.++++..|+.+|..+..
T Consensus 247 ~~~~~~~a~~~L~~i~~ 263 (1049)
T 3m1i_C 247 SPDTRAITLKCLTEVSN 263 (1049)
T ss_dssp SHHHHHHHHHHHHHHHH
T ss_pred CHhHHHHHHHHHHHHHh
Confidence 33788888888887775
No 149
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=57.95 E-value=25 Score=31.06 Aligned_cols=100 Identities=7% Similarity=-0.019 Sum_probs=71.3
Q ss_pred cccCCCCCCCcccchhhHHHHHHHHHhhcccccCCCCCCCChhhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhc-hH
Q 014196 27 RRRQNEPNHNHEKSRTLKNINCQEEKQVIIEEKNHEQSDIEEDDCVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKED-VK 105 (429)
Q Consensus 27 ~T~~~L~~~~L~PN~~Lr~lI~~W~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~-~~ 105 (429)
+|...+.. ||.++ |.+-|+... ..+. .....+..+.++|.+.++.++..|+..|-.+.+.. ..
T Consensus 13 AT~~~~~~----~dw~~---~leicd~i~-----~~~~----~~k~a~r~l~krl~~~n~~~~l~aL~Lle~~vkNcG~~ 76 (220)
T 1dvp_A 13 ATSHLRLE----PDWPS---ILLICDEIN-----QKDV----TPKNAFAAIKKKMNSPNPHSSCYSLLVLESIVKNCGAP 76 (220)
T ss_dssp HHCTTCSS----CCHHH---HHHHHHHHH-----TTSS----CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHH
T ss_pred HcCCCCCC----cCHHH---HHHHHHhhc-----CCCc----CHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCHH
Confidence 45555554 77774 566665330 1111 24667888999999999999999999999988864 34
Q ss_pred HHHHHHhcCcHHHHHHhhcC-CCHHHHHHHHHHHHHhc
Q 014196 106 IKKLMAELGVIQMLVSMVST-EVIGRRRAAIKALIQLA 142 (429)
Q Consensus 106 ~r~~i~~~G~i~~Lv~lL~s-~~~~~~~~A~~aL~nLa 142 (429)
....+.....+..|+.++.. .+..+++.++..+...+
T Consensus 77 f~~eva~~~fl~~l~~l~~~~~~~~Vk~kil~li~~W~ 114 (220)
T 1dvp_A 77 VHEEVFTKENCEMFSSFLESTPHENVRQKMLELVQTWA 114 (220)
T ss_dssp HHHHHSSHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 56677777788888888864 46788888887776665
No 150
>3l9t_A Putative uncharacterized protein SMU.31; hypothetical protein, unknown function; HET: EPE; 2.21A {Streptococcus mutans}
Probab=57.30 E-value=1e+02 Score=27.56 Aligned_cols=138 Identities=14% Similarity=0.049 Sum_probs=82.7
Q ss_pred HHhhcCCCHHHHHHHHHHHHHhccCCCchHHHHHhcCccchhhh-hccCCCHHHHHHHHHHHHHhhc-cCCCccccccCC
Q 014196 120 VSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPK-NVDAVDESTRHEFGELLLSLSS-LANTHIPLSSSE 197 (429)
Q Consensus 120 v~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~iv~~G~i~~Lv~-lL~~~~~~~~~~aa~~L~~Ls~-~~~~~~~i~~~g 197 (429)
-.+..++..++|..|+.+|..+ .. ... .++.+.. +.....-.+++.++.++..++. .+.. .
T Consensus 77 ~~L~~~~~deVR~~Av~lLg~~-~~---~~~------~L~~ir~~va~D~~WrVre~lA~a~~~~~~~~~pe-------~ 139 (240)
T 3l9t_A 77 FLAYQSDVYQVRMYAVFLFGYL-SK---DKE------ILIFMRDEVSKDNNWRVQEVLAKAFDEFCKKIEYK-------K 139 (240)
T ss_dssp HHHHTCSSHHHHHHHHHHHHHT-TT---SHH------HHHHHHHTGGGCSCHHHHHHHHHHHHHHHHHHCTT-------T
T ss_pred HHHHhCcchHHHHHHHHHHHhc-cC---cHH------HHHHHHHHhCCCCCccHHHHHHHHHHHHHHhcCHH-------H
Confidence 4455666678999999988877 22 111 2333333 3344557788888888888884 2211 1
Q ss_pred cHHHHHHhhhcCCcHHHHHHHHHHHHHhccCCCChhHHHhcCcHHHHHHhccCCcchHHHH-HHHHHHhhC-ChhcHHHH
Q 014196 198 ILPFLVGILESGSSVETKELCIGALYNLSAVLDNARPMVSNGVVHTLLKLCSMKERLSEKS-LATLGNLVV-TSTGKKAM 275 (429)
Q Consensus 198 ~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~n~~~iv~~G~v~~Lv~lL~~~~~~~~~a-~~~L~~La~-~~e~~~~i 275 (429)
.++.+...+.+++. .+++.|...+.--+..+.. ...-.-++|.|-.+..|++..+.++ ...|..+++ +|+--..+
T Consensus 140 ~l~~~~~W~~d~n~-~VRR~Ase~~rpW~~~~~~--k~dp~~ll~iL~~L~~D~s~yVrKSVan~LrD~SK~~Pd~V~~~ 216 (240)
T 3l9t_A 140 ALPIIDEWLKSSNL-HTRRAATEGLRIWTNRPYF--KENPNEAIRRIADLKEDVSEYVRKSVGNALRDISKKFPDLVKIE 216 (240)
T ss_dssp THHHHHHHHHCSSH-HHHHHHHHHTCSGGGSTTT--TTCHHHHHHHHHTTTTCSCHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHhcCCCH-HHHHHHHHhhHHHhccchh--hcCHHHHHHHHHHhcCChHHHHHHHHHHHHHHHhhhCHHHHHHH
Confidence 57888888888887 6888777765432322111 1111123455555666766555554 558889998 56655544
Q ss_pred hc
Q 014196 276 ED 277 (429)
Q Consensus 276 ~~ 277 (429)
++
T Consensus 217 ~~ 218 (240)
T 3l9t_A 217 LK 218 (240)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 151
>3ldz_A STAM-1, signal transducing adapter molecule 1; ubiquitin-binding, cytoplasm, UBL conjugation, endosome, membrane, protein transport, SH3 domain; 2.60A {Homo sapiens} SCOP: a.118.9.0
Probab=55.92 E-value=80 Score=25.55 Aligned_cols=68 Identities=10% Similarity=0.109 Sum_probs=51.5
Q ss_pred HHHHhcccCCChhHHHHHHHHHHHHhhC-CHHHHHHHHhCCchHHHHHHhhcCCHHHHHHHHHHHHHHHh
Q 014196 284 SLIEILTWEEKPKCQELSAYILMILAHQ-SSEQRDKMAKSGIVHVSLQLALLGSPLAQRRASKLLQWFKD 352 (429)
Q Consensus 284 ~Lv~~L~~~~s~~~~e~A~~~L~~L~~~-~~~~~~~i~~~G~v~~L~~ll~~~~~~~k~~A~~lL~~l~~ 352 (429)
+|.+-|. ++++..+..|+.+|-.+..+ .......+.....+.-|+.++....+.++++...+++...+
T Consensus 46 ai~Krl~-~~n~~~ql~AL~LLe~~vkNcG~~f~~evas~~Fl~el~~l~~~~~~~Vk~kil~li~~W~~ 114 (140)
T 3ldz_A 46 SIMRRVN-HKDPHVAMQALTLLGACVSNCGKIFHLEVCSRDFASEVSNVLNKGHPKVCEKLKALMVEWTD 114 (140)
T ss_dssp HHHHHHT-CSSHHHHHHHHHHHHHHHHHSCHHHHHHHSSHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHc-CCChHHHHHHHHHHHHHHHhcCHHHHHHHhhHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Confidence 6777777 78899988888777665443 45666677666777788888877788999999998877665
No 152
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=53.44 E-value=5.4 Score=30.47 Aligned_cols=43 Identities=12% Similarity=0.119 Sum_probs=34.2
Q ss_pred hhhhhHH--HHHHHHhc-cc--cccCCCCCCCcccchhhHHHHHHHHH
Q 014196 10 RLQFFSR--IRQFIQSK-SA--RRRQNEPNHNHEKSRTLKNINCQEEK 52 (429)
Q Consensus 10 ~~~TydR--Ie~W~~~g-~~--~T~~~L~~~~L~PN~~Lr~lI~~W~~ 52 (429)
=|++|=+ |.+|+..+ .. ..+.++....+++|..+..+++....
T Consensus 41 CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~~l~~~~~~~~i~~~~~~ 88 (100)
T 3lrq_A 41 CSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCRWAEEVTQQLDT 88 (100)
T ss_dssp TCCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCEECTTHHHHHHHHHH
T ss_pred CCChhhHHHHHHHHHHCcCCCCCCCCcCCHHHhHhhHHHHHHHHHHHH
Confidence 4788988 99999877 34 77777777789999999888877553
No 153
>1lsh_A Lipovitellin (LV-1N, LV-1C); vitellogenin, lipoprotein, plasma apolipoprote apolipoprotein B, APOB; HET: PLD UPL; 1.90A {Ichthyomyzon unicuspis} SCOP: a.118.4.1 f.7.1.1 f.7.1.1
Probab=52.82 E-value=2.7e+02 Score=30.63 Aligned_cols=202 Identities=12% Similarity=0.107 Sum_probs=100.2
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchH----HHHHHHhcC---cHHHHHHhhcCCCHHHHHHHHHHHHHhcc
Q 014196 71 CVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVK----IKKLMAELG---VIQMLVSMVSTEVIGRRRAAIKALIQLAN 143 (429)
Q Consensus 71 ~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~----~r~~i~~~G---~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~ 143 (429)
....-.|++.|..-+.+.-......+. ..+. ..+.+..+| ++..+.+.+.+......+ |+.+|..+..
T Consensus 310 ~~~f~~Lv~~lR~~~~e~L~~l~~~~~----~~~~~r~~~lDal~~aGT~~a~~~i~~~i~~~~l~~~e-a~~~l~~~~~ 384 (1056)
T 1lsh_A 310 PAKFLRLTAFLRNVDAGVLQSIWHKLH----QQKDYRRWILDAVPAMATSEALLFLKRTLASEQLTSAE-ATQIVASTLS 384 (1056)
T ss_dssp HHHHHHHHHHHTTSCHHHHHHHHHHHT----TSHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTCSCHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHh----ccHHHHHHHHHHhHhcCCHHHHHHHHHHHHcCCCCHHH-HHHHHHHhhc
Confidence 445667777777665544333333322 1222 334455556 444556666665543333 3333322221
Q ss_pred CCCchHHHHHhcCccchhhhhccCC----CHHHHHHHHHHHHHh----hccCCCccccccCCcHHHHHHhh----hcCCc
Q 014196 144 GTYTNKAIMVEAGILTKLPKNVDAV----DESTRHEFGELLLSL----SSLANTHIPLSSSEILPFLVGIL----ESGSS 211 (429)
Q Consensus 144 ~~~~nk~~iv~~G~i~~Lv~lL~~~----~~~~~~~aa~~L~~L----s~~~~~~~~i~~~g~i~~Lv~lL----~~~~~ 211 (429)
....+.+.+- .+..++.+. +...++.+..++.+| |.....+ ....++.+.+.| ..++.
T Consensus 385 ~~~Pt~e~l~------~~~~l~~~~~~~~~~~l~~ta~La~gslV~k~c~~~~~c----~~~~v~~i~~~l~~~~~~~~~ 454 (1056)
T 1lsh_A 385 NQQATRESLS------YARELLNTSFIRNRPILRKTAVLGYGSLVFRYCANTVSC----PDELLQPLHDLLSQSSDRAKE 454 (1056)
T ss_dssp TCCCCHHHHH------HHHHHHTCHHHHTCHHHHHHHHHHHHHHHHHHHTTCSSC----CGGGTHHHHHHHHHHHHTTCH
T ss_pred cCCCCHHHHH------HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHhccCCCC----CHHHHHHHHHHHHHHHhcCCh
Confidence 1112333322 233444332 234444444344444 4332221 113355555554 45554
Q ss_pred HHHHHHHHHHHHHhccCCCChhHHHhcCcHHHHHHhccC-----Cc---chHHHHHHHHHHhhCC-hhcHHHHhcCCCCh
Q 014196 212 VETKELCIGALYNLSAVLDNARPMVSNGVVHTLLKLCSM-----KE---RLSEKSLATLGNLVVT-STGKKAMEDSPLVP 282 (429)
Q Consensus 212 ~~~~~~A~~aL~nLs~~~~n~~~iv~~G~v~~Lv~lL~~-----~~---~~~~~a~~~L~~La~~-~e~~~~i~~~~~i~ 282 (429)
.-+.-++.+|.|+-.. +.++.|..++.. .+ .++..|+.+|..++.. |+ .+.
T Consensus 455 -~~~~~~LkaLGN~g~p----------~~l~~l~~~l~~~~~~~~~~~~rvr~aAi~ALr~~~~~~p~---~v~------ 514 (1056)
T 1lsh_A 455 -EEIVLALKALGNAGQP----------NSIKKIQRFLPGQGKSLDEYSTRVQAEAIMALRNIAKRDPR---KVQ------ 514 (1056)
T ss_dssp -HHHHHHHHHHHHHTCG----------GGHHHHHTTSTTSSSCCCCSCHHHHHHHHHTTTTGGGTCHH---HHH------
T ss_pred -HHHHHHHHHhhccCCh----------hHHHHHHHhhcCccccccccchHHHHHHHHHHHHhhhhchH---HHH------
Confidence 4566799999998752 357777777742 11 4556788888777642 21 111
Q ss_pred HHHHHhcc-cCCChhHHHHHHHHHHH
Q 014196 283 ESLIEILT-WEEKPKCQELSAYILMI 307 (429)
Q Consensus 283 ~~Lv~~L~-~~~s~~~~e~A~~~L~~ 307 (429)
+.+.++.. ....++.|-.|+.+|+.
T Consensus 515 ~il~~i~~n~~e~~EvRiaA~~~Lm~ 540 (1056)
T 1lsh_A 515 EIVLPIFLNVAIKSELRIRSCIVFFE 540 (1056)
T ss_dssp HHHHHHHHCTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCChHHHHHHHHHHHH
Confidence 24566553 13566677777766654
No 154
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B
Probab=52.34 E-value=45 Score=36.71 Aligned_cols=140 Identities=9% Similarity=0.054 Sum_probs=78.6
Q ss_pred CCHHHHHHHHHHHHHHhhhchH--HHHHHHhcCcHHHHHHhhcC-----CCHHHHHHHHHHHHHhccCCCchHHHHHhcC
Q 014196 84 GSWEEKEMAAKEIEKLAKEDVK--IKKLMAELGVIQMLVSMVST-----EVIGRRRAAIKALIQLANGTYTNKAIMVEAG 156 (429)
Q Consensus 84 ~~~~~~~~Aa~~L~~La~~~~~--~r~~i~~~G~i~~Lv~lL~s-----~~~~~~~~A~~aL~nLa~~~~~nk~~iv~~G 156 (429)
.++..+..++++++.++..-.+ ....+.+ +++.|+.++.. ....++..++|+|+..+.--..+...+ ..
T Consensus 465 ~~W~~~EA~~~a~gaIa~~~~~~~e~~~l~~--vi~~Ll~l~~~~~~~d~k~~v~~t~~~~lGry~~wl~~~~~~L--~~ 540 (1023)
T 4hat_C 465 WSWHNINTLSWAIGSISGTMSEDTEKRFVVT--VIKDLLDLCVKKRGKDNKAVVASDIMYVVGQYPRFLKAHWNFL--RT 540 (1023)
T ss_dssp CCHHHHHHHHHHHHHTTTSSCHHHHHHHHHH--HHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTCHHHHHHCHHHH--HH
T ss_pred CCHHHHHHHHHHHHHHHcCCCchhHHHHHHH--HHHHHHHhhhccccCcchHHHHHHHHHHHHHHHHHHhccHHHH--HH
Confidence 4789999999999999863222 2333333 47888888863 123345566788876543211111111 12
Q ss_pred ccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccccc--c----CCcHHHHHHhhhc----CCcHHHHHHHHHHHHHhc
Q 014196 157 ILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPLS--S----SEILPFLVGILES----GSSVETKELCIGALYNLS 226 (429)
Q Consensus 157 ~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~--~----~g~i~~Lv~lL~~----~~~~~~~~~A~~aL~nLs 226 (429)
.+..|..-+....+.++..|+.++.+|+... +..+. . ...++.+++.+.. -+. .....+..++..+.
T Consensus 541 vl~~L~~~l~~~~~~v~~~A~~al~~l~~~c--~~~l~~~~~~e~~p~~~~il~~l~~~~~~l~~-~~~~~lyeai~~vi 617 (1023)
T 4hat_C 541 VILKLFEFMHETHEGVQDMACDTFIKIVQKC--KYHFVIQQPRESEPFIQTIIRDIQKTTADLQP-QQVHTFYKACGIII 617 (1023)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHHHHH--THHHHSCCTTCSSCHHHHHHHTHHHHHTTSCH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCHHHHHHHHHHHHHHHHHH--HHHhhccCCCCCchhHHHHHHHHHHHHHhCCH-HHHHHHHHHHHHHH
Confidence 2333444444445678888999999999642 22221 1 2245555443332 233 44556667777776
Q ss_pred cCCC
Q 014196 227 AVLD 230 (429)
Q Consensus 227 ~~~~ 230 (429)
....
T Consensus 618 ~~~~ 621 (1023)
T 4hat_C 618 SEER 621 (1023)
T ss_dssp TTCC
T ss_pred HhCC
Confidence 6443
No 155
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B
Probab=50.24 E-value=13 Score=41.13 Aligned_cols=96 Identities=4% Similarity=-0.009 Sum_probs=53.7
Q ss_pred CCHHHHHHHHHHHHHhccCCCchHHHHHhcCccchhhhhccCCC-HHHH----HHHHHHHHHhhccCCCccccccCCcHH
Q 014196 126 EVIGRRRAAIKALIQLANGTYTNKAIMVEAGILTKLPKNVDAVD-ESTR----HEFGELLLSLSSLANTHIPLSSSEILP 200 (429)
Q Consensus 126 ~~~~~~~~A~~aL~nLa~~~~~nk~~iv~~G~i~~Lv~lL~~~~-~~~~----~~aa~~L~~Ls~~~~~~~~i~~~g~i~ 200 (429)
.+-..+|+++++++.++....+....-.=..+++.|+.++.... .+.+ ..++.++...+..-.. ....++
T Consensus 465 ~~W~~~EA~~~a~gaIa~~~~~~~e~~~l~~vi~~Ll~l~~~~~~~d~k~~v~~t~~~~lGry~~wl~~-----~~~~L~ 539 (1023)
T 4hat_C 465 WSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLCVKKRGKDNKAVVASDIMYVVGQYPRFLKA-----HWNFLR 539 (1023)
T ss_dssp CCHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTCHHHHHH-----CHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHHHHHHHhc-----cHHHHH
Confidence 46788999999999999775333222112245666777665311 1222 2233444433321111 122345
Q ss_pred HHHHhh----hcCCcHHHHHHHHHHHHHhcc
Q 014196 201 FLVGIL----ESGSSVETKELCIGALYNLSA 227 (429)
Q Consensus 201 ~Lv~lL----~~~~~~~~~~~A~~aL~nLs~ 227 (429)
+++..| ....+ .++..|+.++.+||.
T Consensus 540 ~vl~~L~~~l~~~~~-~v~~~A~~al~~l~~ 569 (1023)
T 4hat_C 540 TVILKLFEFMHETHE-GVQDMACDTFIKIVQ 569 (1023)
T ss_dssp HHHHHHHHHTTCSCH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCH-HHHHHHHHHHHHHHH
Confidence 544443 33333 689999999999996
No 156
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=49.99 E-value=4.1 Score=34.44 Aligned_cols=42 Identities=10% Similarity=-0.123 Sum_probs=34.2
Q ss_pred hhhhhhHH--HHHHHHhcc-c--cccCCCCCCCcccchhhHHHHHHH
Q 014196 9 MRLQFFSR--IRQFIQSKS-A--RRRQNEPNHNHEKSRTLKNINCQE 50 (429)
Q Consensus 9 ~~~~TydR--Ie~W~~~g~-~--~T~~~L~~~~L~PN~~Lr~lI~~W 50 (429)
-=|+||=+ |++|+..+. . ..++++...++.||..+++.|..+
T Consensus 35 ~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~~~~~i~~l 81 (170)
T 3hcs_A 35 PCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFAKREILSL 81 (170)
T ss_dssp TTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGGCEECHHHHHHHHTS
T ss_pred CCCCHHHHHHHHHHHHhCCCCCCCCccCcchhhhhhhHHHHHHHhhc
Confidence 45799999 999998764 3 777888777899999999988763
No 157
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=49.55 E-value=0.57 Score=34.16 Aligned_cols=39 Identities=13% Similarity=-0.036 Sum_probs=29.7
Q ss_pred hhhhhhHH--HHHHHHhc------c-c--cccCCCCCCCcccchhhHHHH
Q 014196 9 MRLQFFSR--IRQFIQSK------S-A--RRRQNEPNHNHEKSRTLKNIN 47 (429)
Q Consensus 9 ~~~~TydR--Ie~W~~~g------~-~--~T~~~L~~~~L~PN~~Lr~lI 47 (429)
-=|++|=+ |++|+... . . ..++++...++.||..|+++|
T Consensus 29 ~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~~~l~~n~~l~~lv 78 (79)
T 2egp_A 29 DCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHLQANQHLANIV 78 (79)
T ss_dssp SSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCSSGGGTCSSSCCCC
T ss_pred CCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCHhhCCcCHHHHHhh
Confidence 34789988 99999762 2 2 667777777899999988765
No 158
>3a6p_A Exportin-5; exportin-5, RANGTP, nuclearexport, importin-BE family, nucleus, phosphoprotein, protein transport; HET: GTP; 2.92A {Homo sapiens}
Probab=49.50 E-value=3.1e+02 Score=30.49 Aligned_cols=139 Identities=13% Similarity=0.097 Sum_probs=80.4
Q ss_pred HHHHHHHHhcCC--CHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhh--cCCCHHHHHHHHHHHHHhccC----
Q 014196 73 LLQKSVKRLHFG--SWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMV--STEVIGRRRAAIKALIQLANG---- 144 (429)
Q Consensus 73 ~l~~lv~~L~~~--~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL--~s~~~~~~~~A~~aL~nLa~~---- 144 (429)
.+..++..+.++ +.+.|.+|-..|..+-+.. + +...+...| .+.++.+|..|+..|.|....
T Consensus 12 ~l~~~l~~~~~p~~~~~~r~~Ae~~L~~~~~~p-~---------~~~~~~~~L~~~s~~~~vR~~A~~~Lk~~I~~~W~~ 81 (1204)
T 3a6p_A 12 QLVKAVTVMMDPNSTQRYRLEALKFCEEFKEKC-P---------ICVPCGLRLAEKTQVAIVRHFGLQILEHVVKFRWNG 81 (1204)
T ss_dssp HHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHC-T---------THHHHHHHHTSTTSCHHHHHHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHhCCCCChHHHHHHHHHHHHHHhCc-h---------HHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHhccc
Confidence 355555555554 5667888888887765432 1 233333333 345789999999999886432
Q ss_pred -CCchHHHHHhcCccchhhhhccC---CCHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcCCcHHHHHHHHH
Q 014196 145 -TYTNKAIMVEAGILTKLPKNVDA---VDESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESGSSVETKELCIG 220 (429)
Q Consensus 145 -~~~nk~~iv~~G~i~~Lv~lL~~---~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~~ 220 (429)
+++.|..|.+ ..+..+...... ....++...+.++..+...+-.. .=.+.++.|++++.++ . ..+..++.
T Consensus 82 l~~e~k~~Ir~-~ll~~l~~~~~~~~~~~~~vr~kla~~la~Ia~~d~p~---~Wp~ll~~L~~~~~~~-~-~~~e~~L~ 155 (1204)
T 3a6p_A 82 MSRLEKVYLKN-SVMELIANGTLNILEEENHIKDALSRIVVEMIKREWPQ---HWPDMLIELDTLSKQG-E-TQTELVMF 155 (1204)
T ss_dssp SCHHHHHHHHH-HHHHHHHHSSCCTTSSCHHHHHHHHHHHHHHHHHHSTT---TCTTHHHHHHHHHHTC-H-HHHHHHHH
T ss_pred CCHHHHHHHHH-HHHHHHHhhccccccccHHHHHHHHHHHHHHHHHhCcc---cchHHHHHHHHHhcCC-H-HHHHHHHH
Confidence 2233444433 233333222111 23556666677777777553110 0146789999998763 3 45677888
Q ss_pred HHHHhcc
Q 014196 221 ALYNLSA 227 (429)
Q Consensus 221 aL~nLs~ 227 (429)
+|..|+.
T Consensus 156 iL~~L~E 162 (1204)
T 3a6p_A 156 ILLRLAE 162 (1204)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8888864
No 159
>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T*
Probab=45.71 E-value=3.3e+02 Score=29.61 Aligned_cols=222 Identities=10% Similarity=0.046 Sum_probs=120.8
Q ss_pred HHHHHHHHHHhcCC--CHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCC---CHHHHHHHHHHHHHhccC-
Q 014196 71 CVLLQKSVKRLHFG--SWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTE---VIGRRRAAIKALIQLANG- 144 (429)
Q Consensus 71 ~~~l~~lv~~L~~~--~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~---~~~~~~~A~~aL~nLa~~- 144 (429)
...+...|...-++ +++.|.+|-..|..+-+ +++ +......+|... ++.++-.|+..|.+....
T Consensus 5 ~~~v~~Al~~~~~p~sd~~~r~~A~~~L~~~q~-sp~---------aw~~~~~iL~~~~~~~~~vr~fa~~~L~~~I~~l 74 (980)
T 3ibv_A 5 AQDVENAVEAALDPSVGPIIKQQATDFIGSLRS-SST---------GWKICHEIFSEKTKYKPSTRLICLQTLSEKVREW 74 (980)
T ss_dssp HHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHH-STT---------HHHHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHc-Chh---------HHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHhC
Confidence 44566666433333 67888888888877754 333 344456666553 688999998888765431
Q ss_pred CCc----hHHHHHhcCccchhhhhcc-CCCHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcCCcHHHHHHHH
Q 014196 145 TYT----NKAIMVEAGILTKLPKNVD-AVDESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESGSSVETKELCI 219 (429)
Q Consensus 145 ~~~----nk~~iv~~G~i~~Lv~lL~-~~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~A~ 219 (429)
+++ .+..+. ...+..+...-. ....-.+...+.+|..+...+-. -.=.+.++-|+.++.+++........+
T Consensus 75 ~~e~~~~~~~~lr-~~ll~~l~~~~~~~~~~~IrnKL~~~la~l~~~~~p---~~Wp~~i~~l~~~~~~~~~~~~~~~~L 150 (980)
T 3ibv_A 75 NNESNLLELQMIR-DSVWSYIKELSFLDEPAYISNAVQHLLTLLFLQLYP---SNWNDFFASLQGVIAASSQSEFSNFYL 150 (980)
T ss_dssp CTTTSHHHHHHHH-HHHHHHHHHCCSTTSCTHHHHHHHHHHHHHHHHHTT---TTCTTHHHHHHHHHHHHCCHHHHHHHH
T ss_pred ChhhhHHHHHHHH-HHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHhCc---ccCchHHHHHHHHhcCCChhHHHHHHH
Confidence 122 333332 223333332110 12244556666677777643310 012457888999887754312344556
Q ss_pred HHHHHhccC--C----CC----------hhHHHhc---CcHHHHHHhccC----C-cchHHHHHHHHHHhhCChhcHHHH
Q 014196 220 GALYNLSAV--L----DN----------ARPMVSN---GVVHTLLKLCSM----K-ERLSEKSLATLGNLVVTSTGKKAM 275 (429)
Q Consensus 220 ~aL~nLs~~--~----~n----------~~~iv~~---G~v~~Lv~lL~~----~-~~~~~~a~~~L~~La~~~e~~~~i 275 (429)
++|..|+.. + .. +..+.+. -+++..+.+|.. . +.++..++.+|.....- -.-..+
T Consensus 151 riL~~i~EEv~~~~~~~~~~~~~r~~~lkd~m~~~~~~~i~~~~~~iL~~~~~~~~~~l~~~~L~~l~s~i~w-i~~~~i 229 (980)
T 3ibv_A 151 KVLLSIGDEIADSLVLKTDVQIQKDNLVKDAIRANDMSDIVSFVYEMMLAYSNAKNYGTVGLCLQVYAQWVSW-ININLI 229 (980)
T ss_dssp HHHHHHHHHHCCCCSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT-SCHHHH
T ss_pred HHHHHhHHHHHhcccccCHHHHhhhHHHHHHHHhccHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhh-cCHHhh
Confidence 666644321 1 00 1122211 113444444432 2 36778888888766652 223455
Q ss_pred hcCCCChHHHHHhcccCCChhHHHHHHHHHHHHhhC
Q 014196 276 EDSPLVPESLIEILTWEEKPKCQELSAYILMILAHQ 311 (429)
Q Consensus 276 ~~~~~i~~~Lv~~L~~~~s~~~~e~A~~~L~~L~~~ 311 (429)
.+. .+++.+.++|. ++..++.|+.+|..+...
T Consensus 230 ~~~-~ll~~l~~~L~---~~~~r~~A~ecL~ei~~k 261 (980)
T 3ibv_A 230 VNE-PCMNLLYSFLQ---IEELRCAACETMTEIVNK 261 (980)
T ss_dssp HCH-HHHHHHHHHTT---SHHHHHHHHHHHHHHHHS
T ss_pred hcc-hHHHHHHHHcC---ChHHHHHHHHHHHHHHHc
Confidence 553 34446777775 478899999999888763
No 160
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=45.12 E-value=2.3 Score=33.52 Aligned_cols=44 Identities=11% Similarity=-0.001 Sum_probs=33.1
Q ss_pred hhhhhhHH--HHHHHHhccc---cccCCCCC-------CCcccchhhHHHHHHHHH
Q 014196 9 MRLQFFSR--IRQFIQSKSA---RRRQNEPN-------HNHEKSRTLKNINCQEEK 52 (429)
Q Consensus 9 ~~~~TydR--Ie~W~~~g~~---~T~~~L~~-------~~L~PN~~Lr~lI~~W~~ 52 (429)
-=|+||=+ |++|+..++. ..++++.. ..+.+|..|..+|+.|..
T Consensus 32 ~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~~~~~n~~l~~~i~~~~p 87 (115)
T 3l11_A 32 PCNHTLCKPCFQSTVEKASLCCPFCRRRVSSWTRYHTRRNSLVNVELWTIIQKHYP 87 (115)
T ss_dssp TTSCEECHHHHCCCCCTTTSBCTTTCCBCHHHHHHHHHTTCCBCHHHHHHHHHHSH
T ss_pred CCCCHHhHHHHHHHHhHCcCCCCCCCcccCccccccccccchhhHHHHHHHHHHCC
Confidence 45799999 9999977543 55555542 467789999999999874
No 161
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=44.21 E-value=1.3e+02 Score=25.02 Aligned_cols=68 Identities=6% Similarity=0.049 Sum_probs=52.5
Q ss_pred HHHHhcccCCChhHHHHHHHHHHHHhhC-CHHHHHHHHhCCchHHHHHHhhc-CCHHHHHHHHHHHHHHHh
Q 014196 284 SLIEILTWEEKPKCQELSAYILMILAHQ-SSEQRDKMAKSGIVHVSLQLALL-GSPLAQRRASKLLQWFKD 352 (429)
Q Consensus 284 ~Lv~~L~~~~s~~~~e~A~~~L~~L~~~-~~~~~~~i~~~G~v~~L~~ll~~-~~~~~k~~A~~lL~~l~~ 352 (429)
+|.+-|. +.++..+-.|+.+|-.+..+ .......+.....+.-|+.++.. ..+.+++++..+++.-.+
T Consensus 56 al~krl~-~~n~~vql~AL~LLd~~vkNcG~~Fh~evas~~Fl~el~~l~~~~~~~~Vk~kil~li~~W~~ 125 (163)
T 1x5b_A 56 AIMKRVN-HKVPHVALQALTLLGACVANCGKIFHLEVCSRDFATEVRAVIKNKAHPKVCEKLKSLMVEWSE 125 (163)
T ss_dssp HHHHHHT-CSSHHHHHHHHHHHHHHHHHTCHHHHHHHTSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHc-CCCHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHH
Confidence 5777777 78899998888877765553 46677778777888888888875 467899999988877665
No 162
>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A
Probab=43.00 E-value=3.5e+02 Score=29.81 Aligned_cols=220 Identities=14% Similarity=0.106 Sum_probs=126.1
Q ss_pred hhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcC-CCHHHHHHHHHHHHHhccC---
Q 014196 69 DDCVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVST-EVIGRRRAAIKALIQLANG--- 144 (429)
Q Consensus 69 ~~~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s-~~~~~~~~A~~aL~nLa~~--- 144 (429)
-+...+..++..+-+++.+.|.+|-..|..+-+ +++ +...+..+|.. .++.+|-.|+..|.+....
T Consensus 25 ~Dv~~Le~lv~~ly~p~~~~r~qA~~~L~q~q~-sp~---------aw~~~~~iL~~s~~~~vR~fAa~~L~~~I~~~W~ 94 (1073)
T 3gjx_A 25 LDINLLDNVVNCLYHGEGAQQRMAQEVLTHLKE-HPD---------AWTRVDTILEFSQNMNTKYYGLQILENVIKTRWK 94 (1073)
T ss_dssp CSHHHHHHHHHTTTCSSHHHHHHHHHHHHTSSC-CSC---------HHHHHTCC---CCSHHHHHHHHHHHHHHHHHTGG
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHc-Cch---------HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhh
Confidence 356678889988888887777777777766543 443 34445556644 5789999999999887542
Q ss_pred --CCchHHHHHhcCccchhhhhccC-----CCHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcCCcHHHHHH
Q 014196 145 --TYTNKAIMVEAGILTKLPKNVDA-----VDESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESGSSVETKEL 217 (429)
Q Consensus 145 --~~~nk~~iv~~G~i~~Lv~lL~~-----~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~ 217 (429)
+++.+..+. ...+..+...-.. .+...+...+.++..+...+-.. .=.+.++-|++++..+. .....
T Consensus 95 ~L~~e~~~~LR-~~Ll~~l~~~~~~~~~~e~~~~vinKLa~~La~I~k~~~P~---~Wp~fi~dLv~~~~~~~--~~~~~ 168 (1073)
T 3gjx_A 95 ILPRNQCEGIK-KYVVGLIIKTSSDPTCVEKEKVYIGKLNMILVQILKQEWPK---HWPTFISDIVGASRTSE--SLCQN 168 (1073)
T ss_dssp GSCHHHHHHHH-HHHHHHHHHHHTCGGGGTSCHHHHHHHHHHHHHHHHHHTTT---TCTTHHHHHHHHHHHCH--HHHHH
T ss_pred hCCHHHHHHHH-HHHHHHHHHHccCccccccchHHHHHHHHHHHHHHHHhChh---hccHHHHHHHHHhCCCH--HHHHH
Confidence 222333333 2333333332221 12344545566666666443100 01456888888886543 34566
Q ss_pred HHHHHHHhccC--CC-------C-----hhHHHhcCcHHHHHHhc----cCC--cchHHHHHHHHHHhhCChhcHHHHhc
Q 014196 218 CIGALYNLSAV--LD-------N-----ARPMVSNGVVHTLLKLC----SMK--ERLSEKSLATLGNLVVTSTGKKAMED 277 (429)
Q Consensus 218 A~~aL~nLs~~--~~-------n-----~~~iv~~G~v~~Lv~lL----~~~--~~~~~~a~~~L~~La~~~e~~~~i~~ 277 (429)
.+..|..|+.. .- . +..+.+ -+|.++.++ ... ..+...++.+|.....-- .-..+++
T Consensus 169 ~L~IL~~L~EEV~d~~~~~l~~~r~~~lk~~L~~--~~~~Il~ll~~iL~~~~~~~lv~~~L~~L~~~~sWI-~i~~i~~ 245 (1073)
T 3gjx_A 169 NMVILKLLSEEVFDFSSGQITQVKAKHLKDSMCN--EFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWI-PLGYIFE 245 (1073)
T ss_dssp HHHHHHHHHHHHTTSHHHHBCHHHHHHHHHHHHH--TCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTTS-CTHHHHS
T ss_pred HHHHHHHHHHHHHhcccccccHHHHHHHHHHHHH--HHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHhc-CHHHhcc
Confidence 77777777643 10 1 112222 245555544 332 267777888888776622 1345666
Q ss_pred CCCChHHH-HHhcccCCChhHHHHHHHHHHHHhhC
Q 014196 278 SPLVPESL-IEILTWEEKPKCQELSAYILMILAHQ 311 (429)
Q Consensus 278 ~~~i~~~L-v~~L~~~~s~~~~e~A~~~L~~L~~~ 311 (429)
.+ +++.| ..+| .++..++.|+.+|..+...
T Consensus 246 ~~-ll~~L~~~~L---~~~~~r~aA~dcL~eIv~k 276 (1073)
T 3gjx_A 246 TK-LISTLIYKFL---NVPMFRNVSLKCLTEIAGV 276 (1073)
T ss_dssp SS-HHHHHHHHTS---SSHHHHHHHHHHHHHHHHS
T ss_pred ch-HHHHHHHHhc---CChHHHHHHHHHHHHHHhc
Confidence 44 44355 3555 4678889999999888763
No 163
>3qml_C Protein SLS1, nucleotide exchange factor SIL1; armadillo like repeats, chaperone-protein transport complex; 2.31A {Saccharomyces cerevisiae}
Probab=42.12 E-value=2.2e+02 Score=26.52 Aligned_cols=132 Identities=11% Similarity=0.080 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHhhhchHHHHHHHh--cCcHHHHHHhhcCCCHHHHHHHHHHHHHhccCCCchHHHHHhc--Cccchhh
Q 014196 87 EEKEMAAKEIEKLAKEDVKIKKLMAE--LGVIQMLVSMVSTEVIGRRRAAIKALIQLANGTYTNKAIMVEA--GILTKLP 162 (429)
Q Consensus 87 ~~~~~Aa~~L~~La~~~~~~r~~i~~--~G~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~nk~~iv~~--G~i~~Lv 162 (429)
+.-..|+..|..++. +-+.=..|.+ ...+..|+ +....++.+++.|+.++...-.+++.....|.+. ..+..+.
T Consensus 43 ~~le~aLD~L~ElSH-Di~~G~KI~~~ef~lL~nL~-~~~~~~~~~rE~aarII~ssLRNNP~Al~~V~~~~p~fv~~lf 120 (315)
T 3qml_C 43 ARLEDSFDRIMEFAH-DYKHGYKIITHEFALLANLS-LNENLPLTLRELSTRVITSCLRNNPPVVEFINESFPNFKSKIM 120 (315)
T ss_dssp HHHHHHHHHHGGGTT-SHHHHHHHHHHHHHHHHHHH-HCTTSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHCTTHHHHHH
T ss_pred HHHHHHHHHHHHhhh-hHHhhhHHHhCcHHHHHHHH-hhccCChhHHHHHHHHHHHHHccCHHHHHHHHHhChhHHHHHH
Confidence 344568888888884 5444444544 34444555 4455678899999999998888876555555542 2222222
Q ss_pred h----hccCC---CHHHHHHHHHHHHHhhccCCCccccccCCcHHHHHHhhhcC--CcHHHHHHHHHHHHHh
Q 014196 163 K----NVDAV---DESTRHEFGELLLSLSSLANTHIPLSSSEILPFLVGILESG--SSVETKELCIGALYNL 225 (429)
Q Consensus 163 ~----lL~~~---~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~--~~~~~~~~A~~aL~nL 225 (429)
. ++..+ .........++|-.|.... ..+ ...++..|.+++..+ +. ++|..++..+..+
T Consensus 121 ~~L~~~~~~~~~~~~~l~KR~LsII~~L~~~~---~~F-~~~~m~~L~~ly~~~~~d~-~~k~Kvl~li~d~ 187 (315)
T 3qml_C 121 AALSNLNDSNHRSSNILIKRYLSILNELPVTS---EDL-PIYSTVVLQNVYERNNKDK-QLQIKVLELISKI 187 (315)
T ss_dssp HHHHHHHCC--CCCHHHHHHHHHHHHHSCCCS---TTC---CCHHHHHHHHHHTTTCH-HHHHHHHHHHHHH
T ss_pred HHHHHHhhcccchhHHHHHHHHHHHHHHhcCh---Hhh-hhccHHHHHHHHccCCCCH-HHHHHHHHHHHHH
Confidence 1 11111 1223334456666666443 222 234567777777765 55 6777666665544
No 164
>1vdy_A Hypothetical protein (RAFL09-17-B18); structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Arabidopsis thaliana} PDB: 2dcp_A
Probab=41.72 E-value=52 Score=26.86 Aligned_cols=70 Identities=14% Similarity=0.163 Sum_probs=47.8
Q ss_pred HHHHhcccCCChhHHHHHHHHHHHHhh-CCHHHHHHHHhC-CchHHHHHHhhc-----C---CHHHHHHHHHHHHHHHhc
Q 014196 284 SLIEILTWEEKPKCQELSAYILMILAH-QSSEQRDKMAKS-GIVHVSLQLALL-----G---SPLAQRRASKLLQWFKDE 353 (429)
Q Consensus 284 ~Lv~~L~~~~s~~~~e~A~~~L~~L~~-~~~~~~~~i~~~-G~v~~L~~ll~~-----~---~~~~k~~A~~lL~~l~~~ 353 (429)
.|.+-|. +.++..+-.|+.+|-+||. +++.++..+.+. ..|..|.+.--. | ...++.+|..++..|.+.
T Consensus 53 ~L~kRL~-~k~~~vk~KaL~lL~yL~~~Gs~~f~~~~r~~~~~Ik~l~~F~g~~dp~~G~d~g~~VR~~AkEl~~ll~d~ 131 (140)
T 1vdy_A 53 FILKRLD-NKSPIVKQKALRLIKYAVGKSGSEFRREMQRNSVAVRNLFHYKGHPDPLKGDALNKAVRETAHETISAIFSE 131 (140)
T ss_dssp HHHHHHT-SSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHTTHHHHTTTTCCCCCCTTTSSCHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHhc-CCCcceeehHHHHHHHHHHhCCHHHHHHHHHhHHHHHHHHhcCCCCCcccccchhHHHHHHHHHHHHHHhCc
Confidence 5677777 6778888899999999996 467777777763 233333222111 1 146788899999999975
Q ss_pred c
Q 014196 354 R 354 (429)
Q Consensus 354 ~ 354 (429)
.
T Consensus 132 ~ 132 (140)
T 1vdy_A 132 E 132 (140)
T ss_dssp S
T ss_pred C
Confidence 4
No 165
>3a6p_A Exportin-5; exportin-5, RANGTP, nuclearexport, importin-BE family, nucleus, phosphoprotein, protein transport; HET: GTP; 2.92A {Homo sapiens}
Probab=41.66 E-value=2.9e+02 Score=30.78 Aligned_cols=206 Identities=13% Similarity=0.116 Sum_probs=111.2
Q ss_pred chhhHHHHHHHHHhhcccccCCCCCCCChhhHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHhhh-----chHHHHHHHh
Q 014196 40 SRTLKNINCQEEKQVIIEEKNHEQSDIEEDDCVLLQKSVKRLH--FGSWEEKEMAAKEIEKLAKE-----DVKIKKLMAE 112 (429)
Q Consensus 40 N~~Lr~lI~~W~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~L~--~~~~~~~~~Aa~~L~~La~~-----~~~~r~~i~~ 112 (429)
+...|+-.++|.... ...| .....+...|. +.+..+|.-|+..|++..+. +++.|..|.+
T Consensus 26 ~~~~r~~Ae~~L~~~--~~~p-----------~~~~~~~~~L~~~s~~~~vR~~A~~~Lk~~I~~~W~~l~~e~k~~Ir~ 92 (1204)
T 3a6p_A 26 TQRYRLEALKFCEEF--KEKC-----------PICVPCGLRLAEKTQVAIVRHFGLQILEHVVKFRWNGMSRLEKVYLKN 92 (1204)
T ss_dssp CHHHHHHHHHHHHHH--HHHC-----------TTHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHHSGGGSCHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHH--HhCc-----------hHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHH
Confidence 556777778877543 0100 11344444443 44788888899999987643 3445555543
Q ss_pred cCcHHHHHHhhcC---CCHHHHHHHHHHHHHhccCCCc-hHHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccC-
Q 014196 113 LGVIQMLVSMVST---EVIGRRRAAIKALIQLANGTYT-NKAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLA- 187 (429)
Q Consensus 113 ~G~i~~Lv~lL~s---~~~~~~~~A~~aL~nLa~~~~~-nk~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~- 187 (429)
. .+..+...-.. .+..++.....++..++..+-. .. .+.++.|+.+++. +...++.+..+|..|+..-
T Consensus 93 ~-ll~~l~~~~~~~~~~~~~vr~kla~~la~Ia~~d~p~~W-----p~ll~~L~~~~~~-~~~~~e~~L~iL~~L~Eev~ 165 (1204)
T 3a6p_A 93 S-VMELIANGTLNILEEENHIKDALSRIVVEMIKREWPQHW-----PDMLIELDTLSKQ-GETQTELVMFILLRLAEDVV 165 (1204)
T ss_dssp H-HHHHHHHSSCCTTSSCHHHHHHHHHHHHHHHHHHSTTTC-----TTHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHhhccccccccHHHHHHHHHHHHHHHHHhCcccc-----hHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHc
Confidence 2 33333332111 3577888888888887766321 11 2455666666654 3444555666677665321
Q ss_pred CCcc-----------cccc--CCcHHHHHHhhhcC------------------CcHHHHHHHHHHHHHhccCCCChhHHH
Q 014196 188 NTHI-----------PLSS--SEILPFLVGILESG------------------SSVETKELCIGALYNLSAVLDNARPMV 236 (429)
Q Consensus 188 ~~~~-----------~i~~--~g~i~~Lv~lL~~~------------------~~~~~~~~A~~aL~nLs~~~~n~~~iv 236 (429)
+... .+.+ ...++.+..++... ....+...++.++.+....- ....+.
T Consensus 166 ~~~~~~~~r~~~l~~~l~~~~~~I~~~~~~iL~~~~~~~~~~~~~~~~~~~~~~~~~l~~~aL~~l~~~l~Wi-~~~~i~ 244 (1204)
T 3a6p_A 166 TFQTLPPQRRRDIQQTLTQNMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALNTLAGYIDWV-SMSHIT 244 (1204)
T ss_dssp TSCCSCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCSTTHHHHHHHHHHHHHHHHHHHTTTTTS-CHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhhhhhHHHHHHHHHHHHHHHhcc-CHHHHH
Confidence 1100 1111 12334444444331 01134556666666544321 223344
Q ss_pred hcC--cHHHHHHhccCCcchHHHHHHHHHHhhC
Q 014196 237 SNG--VVHTLLKLCSMKERLSEKSLATLGNLVV 267 (429)
Q Consensus 237 ~~G--~v~~Lv~lL~~~~~~~~~a~~~L~~La~ 267 (429)
+.. .++.+..++.++ +++..|+.+|..++.
T Consensus 245 ~~~~~ll~~l~~~l~~~-~lr~~A~ecL~~i~s 276 (1204)
T 3a6p_A 245 AENCKLLEILCLLLNEQ-ELQLGAAECLLIAVS 276 (1204)
T ss_dssp TTTSHHHHHHHHGGGCT-TTHHHHHHHHHHHHT
T ss_pred hccchHHHHHHHHcCCH-HHHHHHHHHHHHHHh
Confidence 433 777777777654 888999999998886
No 166
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.10 E-value=14 Score=26.64 Aligned_cols=37 Identities=8% Similarity=0.035 Sum_probs=26.5
Q ss_pred hhhhhHH--HHHHHHhccc--cccCCCCCCCcccchhhHHHH
Q 014196 10 RLQFFSR--IRQFIQSKSA--RRRQNEPNHNHEKSRTLKNIN 47 (429)
Q Consensus 10 ~~~TydR--Ie~W~~~g~~--~T~~~L~~~~L~PN~~Lr~lI 47 (429)
=|++|-+ |.+|+..... +.++++. ..+.||..|...+
T Consensus 33 CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~-~~~~~~~~l~~~~ 73 (81)
T 2csy_A 33 CRHYFCESCALEHFRATPRCYICDQPTG-GIFNPAKELMAKL 73 (81)
T ss_dssp TSCEEEHHHHHHHHHHCSBCSSSCCBCC-SCCEECHHHHHHH
T ss_pred CCCHhHHHHHHHHHHCCCcCCCcCcccc-ccCCcHHHHHHHH
Confidence 4789988 9999976544 6677765 4788886654444
No 167
>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T*
Probab=38.20 E-value=4.2e+02 Score=28.73 Aligned_cols=217 Identities=12% Similarity=0.122 Sum_probs=116.1
Q ss_pred cchhhHHHHHHHHHhhcccccCCCCCCCChhhHHHHHHHHHHhcCC---CHHHHHHHHHHHHHHhhh-chH----HHHHH
Q 014196 39 KSRTLKNINCQEEKQVIIEEKNHEQSDIEEDDCVLLQKSVKRLHFG---SWEEKEMAAKEIEKLAKE-DVK----IKKLM 110 (429)
Q Consensus 39 PN~~Lr~lI~~W~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~L~~~---~~~~~~~Aa~~L~~La~~-~~~----~r~~i 110 (429)
++-..|+-+++|+..- +. .++........|... +...|.-|+..|++..+. +++ .+..+
T Consensus 20 sd~~~r~~A~~~L~~~--q~-----------sp~aw~~~~~iL~~~~~~~~~vr~fa~~~L~~~I~~l~~e~~~~~~~~l 86 (980)
T 3ibv_A 20 VGPIIKQQATDFIGSL--RS-----------SSTGWKICHEIFSEKTKYKPSTRLICLQTLSEKVREWNNESNLLELQMI 86 (980)
T ss_dssp SCHHHHHHHHHHHHHH--HH-----------STTHHHHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHCCTTTSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH--Hc-----------ChhHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHhCChhhhHHHHHHH
Confidence 4678899999999765 11 122356666667553 678888899888876541 223 33333
Q ss_pred HhcCcHHHHHHhhc-CCCHHHHHHHHHHHHHhccCCC-chHHHHHhcCccchhhhhccCCCH-HHHHHHHHHHHHhhccC
Q 014196 111 AELGVIQMLVSMVS-TEVIGRRRAAIKALIQLANGTY-TNKAIMVEAGILTKLPKNVDAVDE-STRHEFGELLLSLSSLA 187 (429)
Q Consensus 111 ~~~G~i~~Lv~lL~-s~~~~~~~~A~~aL~nLa~~~~-~nk~~iv~~G~i~~Lv~lL~~~~~-~~~~~aa~~L~~Ls~~~ 187 (429)
.+. .+..+...-. .....++.....+|..++...- .+. .+.++-|+.+++..+. ........+|..++..-
T Consensus 87 r~~-ll~~l~~~~~~~~~~~IrnKL~~~la~l~~~~~p~~W-----p~~i~~l~~~~~~~~~~~~~~~~LriL~~i~EEv 160 (980)
T 3ibv_A 87 RDS-VWSYIKELSFLDEPAYISNAVQHLLTLLFLQLYPSNW-----NDFFASLQGVIAASSQSEFSNFYLKVLLSIGDEI 160 (980)
T ss_dssp HHH-HHHHHHHCCSTTSCTHHHHHHHHHHHHHHHHHTTTTC-----TTHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred HHH-HHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHhCcccC-----chHHHHHHHHhcCCChhHHHHHHHHHHHHhHHHH
Confidence 321 2333333110 1345677777777777765421 111 1233444555543221 11222223333222110
Q ss_pred -CC---------------ccccccC---CcHHHHHHhhhc----CCcHHHHHHHHHHHHHhccCCCChhHHHhcCcHHHH
Q 014196 188 -NT---------------HIPLSSS---EILPFLVGILES----GSSVETKELCIGALYNLSAVLDNARPMVSNGVVHTL 244 (429)
Q Consensus 188 -~~---------------~~~i~~~---g~i~~Lv~lL~~----~~~~~~~~~A~~aL~nLs~~~~n~~~iv~~G~v~~L 244 (429)
+. +..+.+. ..++....+|.. .++ .+...++.+|...... -....++..+.++.+
T Consensus 161 ~~~~~~~~~~~~~r~~~lkd~m~~~~~~~i~~~~~~iL~~~~~~~~~-~l~~~~L~~l~s~i~w-i~~~~i~~~~ll~~l 238 (980)
T 3ibv_A 161 ADSLVLKTDVQIQKDNLVKDAIRANDMSDIVSFVYEMMLAYSNAKNY-GTVGLCLQVYAQWVSW-ININLIVNEPCMNLL 238 (980)
T ss_dssp CCCCSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHTTT-SCHHHHHCHHHHHHH
T ss_pred HhcccccCHHHHhhhHHHHHHHHhccHHHHHHHHHHHHHHHhccCCH-HHHHHHHHHHHHHHhh-cCHHhhhcchHHHHH
Confidence 10 1111111 113444444443 444 6777788888776653 234567778889999
Q ss_pred HHhccCCcchHHHHHHHHHHhhC---ChhcHHHHhc
Q 014196 245 LKLCSMKERLSEKSLATLGNLVV---TSTGKKAMED 277 (429)
Q Consensus 245 v~lL~~~~~~~~~a~~~L~~La~---~~e~~~~i~~ 277 (429)
..+|.++ ++++.|+.+|..+.. .++.+..+..
T Consensus 239 ~~~L~~~-~~r~~A~ecL~ei~~k~~~~~~k~~li~ 273 (980)
T 3ibv_A 239 YSFLQIE-ELRCAACETMTEIVNKKMKPLEKLNLLN 273 (980)
T ss_dssp HHHTTSH-HHHHHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred HHHcCCh-HHHHHHHHHHHHHHHcCCChhhHHHHHH
Confidence 9988774 888999999987765 3444444443
No 168
>3gs3_A Symplekin, LD45768P; helix-turn-helix heat repeat extended loop, transcription, protein binding; 2.40A {Drosophila melanogaster}
Probab=37.82 E-value=1.4e+02 Score=26.97 Aligned_cols=66 Identities=15% Similarity=0.164 Sum_probs=47.4
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHh
Q 014196 71 CVLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQL 141 (429)
Q Consensus 71 ~~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nL 141 (429)
...++.++......+.+.|+-.+..|...++..++.-.. +++.|..+|+++|+.+...++.+..++
T Consensus 52 ~~~l~~il~~~~~~~~~vrk~~~~Fi~e~~~~k~~l~~~-----~l~~L~~Ll~d~d~~V~K~~I~~~~~i 117 (257)
T 3gs3_A 52 EEFLESVLSLAHDSNMEVRKQVVAFVEQVCKVKVELLPH-----VINVVSMLLRDNSAQVIKRVIQACGSI 117 (257)
T ss_dssp HHHHHHHHGGGGCSCHHHHHHHHHHHHHHHHHCGGGHHH-----HHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 344566666444557889999999999888776654333 377888889888998888887766554
No 169
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=36.28 E-value=1.4e+02 Score=24.95 Aligned_cols=68 Identities=9% Similarity=0.011 Sum_probs=52.9
Q ss_pred HHHHhcccCCChhHHHHHHHHHHHHhhCC-HHHHHHHHhCCchHHHHHHhhc------CCHHHHHHHHHHHHHHHh
Q 014196 284 SLIEILTWEEKPKCQELSAYILMILAHQS-SEQRDKMAKSGIVHVSLQLALL------GSPLAQRRASKLLQWFKD 352 (429)
Q Consensus 284 ~Lv~~L~~~~s~~~~e~A~~~L~~L~~~~-~~~~~~i~~~G~v~~L~~ll~~------~~~~~k~~A~~lL~~l~~ 352 (429)
+|.+-|. ++++..+..|+.+|-.+..+. ......+.+...+.-|+.++.. ....+|+++..+++.-..
T Consensus 54 al~krl~-~~n~~vql~AL~LLd~~vkNCG~~Fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~ 128 (171)
T 1juq_A 54 LLAHKIQ-SPQEWEALQALTVLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWTM 128 (171)
T ss_dssp HHHHHHT-CSSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhc-CCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHHHH
Confidence 6777777 789999999988887766543 5677778888888889998863 257899999988877665
No 170
>1mhq_A ADP-ribosylation factor binding protein GGA2; super helix, protein transport; 2.20A {Homo sapiens} SCOP: a.118.9.2
Probab=35.56 E-value=1.6e+02 Score=23.97 Aligned_cols=68 Identities=10% Similarity=0.081 Sum_probs=53.1
Q ss_pred HHHHhcccCCChhHHHHHHHHHHHHhhC-CHHHHHHHHhCCchHHHHHHhhc------CCHHHHHHHHHHHHHHHh
Q 014196 284 SLIEILTWEEKPKCQELSAYILMILAHQ-SSEQRDKMAKSGIVHVSLQLALL------GSPLAQRRASKLLQWFKD 352 (429)
Q Consensus 284 ~Lv~~L~~~~s~~~~e~A~~~L~~L~~~-~~~~~~~i~~~G~v~~L~~ll~~------~~~~~k~~A~~lL~~l~~ 352 (429)
+|.+-|. ++++..+..|+.+|-.+..+ +......+.....+.-|+.++.. ....++++...+++.-..
T Consensus 42 ai~krl~-~~n~~vql~AL~LLe~~vkNCG~~fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~ 116 (148)
T 1mhq_A 42 LLAHKIQ-SPQEKEALYALTVLEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTV 116 (148)
T ss_dssp HHHHHHT-CSSHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHHHTTCCSTTSCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhc-CCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHHHccccCCCCCCHHHHHHHHHHHHHHHH
Confidence 6777777 78999999998888776553 46777888888888888888763 257899998888877665
No 171
>3rru_A TOM1L1 protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, super-helical protein; 3.00A {Homo sapiens}
Probab=35.20 E-value=1.9e+02 Score=23.77 Aligned_cols=109 Identities=9% Similarity=0.085 Sum_probs=72.7
Q ss_pred HHHHHHhccccccCCCCCCCcccchhhHHHHHHHHHhhcccccCCCCCCCChhhHHHHHHHHHHhcC-CCHHHHHHHHHH
Q 014196 17 IRQFIQSKSARRRQNEPNHNHEKSRTLKNINCQEEKQVIIEEKNHEQSDIEEDDCVLLQKSVKRLHF-GSWEEKEMAAKE 95 (429)
Q Consensus 17 Ie~W~~~g~~~T~~~L~~~~L~PN~~Lr~lI~~W~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~L~~-~~~~~~~~Aa~~ 95 (429)
+++|++. .|...+.. ||.. +|.+.|..... .+ ......+..+.++|.. .++.++..|+..
T Consensus 17 ~~~~Iek---ATs~~l~~----~Dw~---~ileicD~In~-----~~----~~pkeA~ral~KRl~~~~n~~~~l~AL~L 77 (152)
T 3rru_A 17 VGHLIEK---ATFAGVQT----EDWG---QFMHICDIINT-----TQ----DGPKDAVKALKKRISKNYNHKEIQLTLSL 77 (152)
T ss_dssp HHHHHHH---HTCSSCCS----CCHH---HHHHHHHHHHH-----ST----THHHHHHHHHHHHHTTCCBHHHHHHHHHH
T ss_pred HHHHHHH---HcCCCCCC----ccHH---HHHHHHHHHhC-----CC----ccHHHHHHHHHHHHcCCCChHHHHHHHHH
Confidence 4455543 46666655 7777 67788864310 11 1346778899999985 478888889888
Q ss_pred HHHHhhhc-hHHHHHHHhcCcHH-HHHHhhcC---CCHHHHHHHHHHHHHhccC
Q 014196 96 IEKLAKED-VKIKKLMAELGVIQ-MLVSMVST---EVIGRRRAAIKALIQLANG 144 (429)
Q Consensus 96 L~~La~~~-~~~r~~i~~~G~i~-~Lv~lL~s---~~~~~~~~A~~aL~nLa~~ 144 (429)
|-.+.+.. ......+....++. .|+.++.. .+..+++..+..+...+..
T Consensus 78 Le~cvkNCG~~fh~eiask~Fl~e~L~kl~~~~~~~~~~Vk~kil~li~~Wa~~ 131 (152)
T 3rru_A 78 IDMCVQNCGPSFQSLIVKKEFVKENLVKLLNPRYNLPLDIQNRILNFIKTWSQG 131 (152)
T ss_dssp HHHHHHHSCHHHHHHHSSHHHHTTTTGGGGSGGGCCCHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhcCHHHHHHHHhhHhHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHH
Confidence 88887643 33455666656665 47777754 2357999999988888744
No 172
>3l9t_A Putative uncharacterized protein SMU.31; hypothetical protein, unknown function; HET: EPE; 2.21A {Streptococcus mutans}
Probab=35.15 E-value=2.4e+02 Score=25.09 Aligned_cols=138 Identities=13% Similarity=0.071 Sum_probs=82.5
Q ss_pred HHHHHHHHHhc-CCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHH-hhcCCCHHHHHHHHHHHHHhcc-CCCch
Q 014196 72 VLLQKSVKRLH-FGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVS-MVSTEVIGRRRAAIKALIQLAN-GTYTN 148 (429)
Q Consensus 72 ~~l~~lv~~L~-~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~-lL~s~~~~~~~~A~~aL~nLa~-~~~~n 148 (429)
..+..+...|- ++..++|.-|++.|..+ ... ...++.+.. +-..++-.|++.++.++..++. .+. .
T Consensus 70 ~~~~~la~~L~~~~~deVR~~Av~lLg~~-~~~---------~~~L~~ir~~va~D~~WrVre~lA~a~~~~~~~~~p-e 138 (240)
T 3l9t_A 70 EYIKKLAFLAYQSDVYQVRMYAVFLFGYL-SKD---------KEILIFMRDEVSKDNNWRVQEVLAKAFDEFCKKIEY-K 138 (240)
T ss_dssp HHHHHHHHHHHTCSSHHHHHHHHHHHHHT-TTS---------HHHHHHHHHTGGGCSCHHHHHHHHHHHHHHHHHHCT-T
T ss_pred HHHHHHHHHHHhCcchHHHHHHHHHHHhc-cCc---------HHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhcCH-H
Confidence 34555555555 44567888888877666 211 123555555 3345667899999999988874 221 1
Q ss_pred HHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhccCCCccccccCC-cHHHHHHhhhcCCcHHHHHHHHHHHHHhcc
Q 014196 149 KAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSLANTHIPLSSSE-ILPFLVGILESGSSVETKELCIGALYNLSA 227 (429)
Q Consensus 149 k~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~~~~~~~i~~~g-~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~ 227 (429)
+ .++.+.....+.+..+|+.|...+.--+.... ...+.. ++|.|-.+..+.+. -+++....+|..+++
T Consensus 139 ~-------~l~~~~~W~~d~n~~VRR~Ase~~rpW~~~~~---~k~dp~~ll~iL~~L~~D~s~-yVrKSVan~LrD~SK 207 (240)
T 3l9t_A 139 K-------ALPIIDEWLKSSNLHTRRAATEGLRIWTNRPY---FKENPNEAIRRIADLKEDVSE-YVRKSVGNALRDISK 207 (240)
T ss_dssp T-------THHHHHHHHHCSSHHHHHHHHHHTCSGGGSTT---TTTCHHHHHHHHHTTTTCSCH-HHHHHHHHHHHHHHT
T ss_pred H-------HHHHHHHHhcCCCHHHHHHHHHhhHHHhccch---hhcCHHHHHHHHHHhcCChHH-HHHHHHHHHHHHHhh
Confidence 1 34556677788888888887665433222111 111212 34444444444444 688888899999998
Q ss_pred CCCC
Q 014196 228 VLDN 231 (429)
Q Consensus 228 ~~~n 231 (429)
....
T Consensus 208 ~~Pd 211 (240)
T 3l9t_A 208 KFPD 211 (240)
T ss_dssp TCHH
T ss_pred hCHH
Confidence 6543
No 173
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=33.42 E-value=17 Score=28.33 Aligned_cols=42 Identities=19% Similarity=0.101 Sum_probs=29.3
Q ss_pred hhhhhhHH--HHHHHHh-ccc--cccCCCCCCCcc-cchhhHHHHHHH
Q 014196 9 MRLQFFSR--IRQFIQS-KSA--RRRQNEPNHNHE-KSRTLKNINCQE 50 (429)
Q Consensus 9 ~~~~TydR--Ie~W~~~-g~~--~T~~~L~~~~L~-PN~~Lr~lI~~W 50 (429)
-=|++|=+ |++|+.. +.. ..++++...++. |+..++++|..+
T Consensus 40 ~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~~l~~~i~~l 87 (116)
T 1rmd_A 40 SCKHLFCRICILRCLKVMGSYCPSCRYPCFPTDLESPVKSFLNILNSL 87 (116)
T ss_dssp TTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCBCCCHHHHHHHHHC
T ss_pred CCCCcccHHHHHHHHhHCcCcCCCCCCCCCHhhccccHHHHHHHHHHh
Confidence 45789999 9999987 433 677777665654 566666666543
No 174
>3gae_A Protein DOA1; UFD3, CDC48, armadillo repeat, nucleus, phosphoprotein, UBL conjugation pathway, WD repeat, nuclear protein; 1.60A {Saccharomyces cerevisiae}
Probab=33.31 E-value=93 Score=27.96 Aligned_cols=130 Identities=15% Similarity=0.168 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHH-hhcCCCHHHHHHHHHHHHHhccCCCc-hHHHHHhcCccchhhhhcc
Q 014196 89 KEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVS-MVSTEVIGRRRAAIKALIQLANGTYT-NKAIMVEAGILTKLPKNVD 166 (429)
Q Consensus 89 ~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~-lL~s~~~~~~~~A~~aL~nLa~~~~~-nk~~iv~~G~i~~Lv~lL~ 166 (429)
+.-++.-+|.++.+.+.+ +.+..++. .+.+.++..+.-++.++.|+-.+. . .+..+.+......++..+.
T Consensus 71 ~fP~lDllRl~~~~~~~~-------~~l~~~l~~~~~~~~~~~~ml~lR~l~NlF~~~-~~g~~l~~~~~~~~~i~~~i~ 142 (253)
T 3gae_A 71 KTPAYDIVRLIVKKLPYS-------SDIKDYIEEGLGNKNITLTMLTVRILVNCFNNE-NWGVKLLESNQVYKSIFETID 142 (253)
T ss_dssp CHHHHHHHHHHGGGCSCG-------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHTTCT-TTHHHHHTSHHHHTTHHHHSC
T ss_pred cchHHHHHHHHHcCCchH-------HHHHHHHHHhcCCCchhHHHHHHHHHHHcccCC-chHHHHHhcchhHHHHHHHHH
Confidence 445666677666544321 22222222 233456778899999999998886 4 5666654333344444331
Q ss_pred C----C----CHHHHHHHHHHHHHhhccC-CCccccccCCcHHHHHHhhhc---------CCcHHHHHHHHHHHHHhccC
Q 014196 167 A----V----DESTRHEFGELLLSLSSLA-NTHIPLSSSEILPFLVGILES---------GSSVETKELCIGALYNLSAV 228 (429)
Q Consensus 167 ~----~----~~~~~~~aa~~L~~Ls~~~-~~~~~i~~~g~i~~Lv~lL~~---------~~~~~~~~~A~~aL~nLs~~ 228 (429)
. . ....+..++.+++|+|..- +.+. +......++..+.. .+. ++...++-||.+|...
T Consensus 143 ~~~~~~~~~~~~nl~iA~ATl~~N~av~~~~~~~---~~e~~~~l~~~i~~~~~~~e~~~~d~-Ea~yR~LvAlGtL~~~ 218 (253)
T 3gae_A 143 TEFSQASAKQSQNLAIAVSTLIFNYSALVTKGNS---DLELLPIVADAINTKYGPLEEYQECE-EAAYRLTVAYGNLATV 218 (253)
T ss_dssp SCCTTCCHHHHHHHHHHHHHHHHHHHHHHHTSCS---CTTHHHHHHHHHHTTTTTSHHHHHSH-HHHHHHHHHHHHHHHH
T ss_pred HHhhhcccCCchhHHHHHHHHHHHHHHHHhhccc---hHHHHHHHHHHHHHHhcccccccCCH-HHHHHHHHHHHHHHhC
Confidence 1 1 1334555677899998653 2121 23345566666652 243 5666788888888864
Q ss_pred CC
Q 014196 229 LD 230 (429)
Q Consensus 229 ~~ 230 (429)
+.
T Consensus 219 ~~ 220 (253)
T 3gae_A 219 EP 220 (253)
T ss_dssp SG
T ss_pred cH
Confidence 43
No 175
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=32.48 E-value=16 Score=25.28 Aligned_cols=32 Identities=9% Similarity=0.112 Sum_probs=23.3
Q ss_pred hhhhhHH--HHHHHHhccc--cccCCCCCCCcccch
Q 014196 10 RLQFFSR--IRQFIQSKSA--RRRQNEPNHNHEKSR 41 (429)
Q Consensus 10 ~~~TydR--Ie~W~~~g~~--~T~~~L~~~~L~PN~ 41 (429)
=|++|=+ |++|+..... ..++++...++.|++
T Consensus 35 CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~~ 70 (71)
T 3ng2_A 35 CGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIY 70 (71)
T ss_dssp TSCEEEHHHHHHHHHHCSBCTTTCCBCCCCSCCCCC
T ss_pred CCChHhHHHHHHHHHcCCCCCCCCCccChhheeecc
Confidence 3678878 9999987765 667777666666653
No 176
>3qml_C Protein SLS1, nucleotide exchange factor SIL1; armadillo like repeats, chaperone-protein transport complex; 2.31A {Saccharomyces cerevisiae}
Probab=32.28 E-value=2.9e+02 Score=25.70 Aligned_cols=148 Identities=13% Similarity=0.058 Sum_probs=85.8
Q ss_pred HHHHHHhhhcC---Cc--HHHHHHHHHHHHHhccCCCChhHHHhcCcHHHHHHhc--cCC-cchHHHHHHHHHHhhC-Ch
Q 014196 199 LPFLVGILESG---SS--VETKELCIGALYNLSAVLDNARPMVSNGVVHTLLKLC--SMK-ERLSEKSLATLGNLVV-TS 269 (429)
Q Consensus 199 i~~Lv~lL~~~---~~--~~~~~~A~~aL~nLs~~~~n~~~iv~~G~v~~Lv~lL--~~~-~~~~~~a~~~L~~La~-~~ 269 (429)
......++.+| +. ...-..|+..|-.+|..-..-.+|++.+ +..|-.++ ... ..+.+.+..++..... +|
T Consensus 24 F~~~r~ll~sg~~~~~~D~~~le~aLD~L~ElSHDi~~G~KI~~~e-f~lL~nL~~~~~~~~~~rE~aarII~ssLRNNP 102 (315)
T 3qml_C 24 FKEMRNIIDSNPTLSSQDIARLEDSFDRIMEFAHDYKHGYKIITHE-FALLANLSLNENLPLTLRELSTRVITSCLRNNP 102 (315)
T ss_dssp HHHHHHHHHHCSSCCHHHHHHHHHHHHHHGGGTTSHHHHHHHHHHH-HHHHHHHHHCTTSCHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHhhhhHHhhhHHHhCc-HHHHHHHHhhccCChhHHHHHHHHHHHHHccCH
Confidence 44556667776 11 1234567777777776554445666532 33333333 222 3789999999985444 78
Q ss_pred hcHHHHhc-CCCChHHHHHhccc---C---CChhHHHHHHHHHHHHhhCCHHHHHHHHhCCchHHHHHHhhcC--CHHHH
Q 014196 270 TGKKAMED-SPLVPESLIEILTW---E---EKPKCQELSAYILMILAHQSSEQRDKMAKSGIVHVSLQLALLG--SPLAQ 340 (429)
Q Consensus 270 e~~~~i~~-~~~i~~~Lv~~L~~---~---~s~~~~e~A~~~L~~L~~~~~~~~~~i~~~G~v~~L~~ll~~~--~~~~k 340 (429)
.....|.+ .+..+..+.+-|.. . .....+..=+++|-.|...+.... ...+..|..+...+ .+.+|
T Consensus 103 ~Al~~V~~~~p~fv~~lf~~L~~~~~~~~~~~~~l~KR~LsII~~L~~~~~~F~-----~~~m~~L~~ly~~~~~d~~~k 177 (315)
T 3qml_C 103 PVVEFINESFPNFKSKIMAALSNLNDSNHRSSNILIKRYLSILNELPVTSEDLP-----IYSTVVLQNVYERNNKDKQLQ 177 (315)
T ss_dssp HHHHHHHHHCTTHHHHHHHHHHHHHCC--CCCHHHHHHHHHHHHHSCCCSTTC-------CCHHHHHHHHHHTTTCHHHH
T ss_pred HHHHHHHHhChhHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHhcChHhhh-----hccHHHHHHHHccCCCCHHHH
Confidence 77777754 23333333333321 1 223445566777777776542221 33578888888877 89999
Q ss_pred HHHHHHHHHHHh
Q 014196 341 RRASKLLQWFKD 352 (429)
Q Consensus 341 ~~A~~lL~~l~~ 352 (429)
.++..++..+-.
T Consensus 178 ~Kvl~li~d~f~ 189 (315)
T 3qml_C 178 IKVLELISKILK 189 (315)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHcc
Confidence 999987665553
No 177
>3bpq_A Antitoxin RELB3, RELB; protein toxin-antitoxin complex; 2.20A {Methanocaldococcus jannaschii}
Probab=31.99 E-value=16 Score=24.27 Aligned_cols=33 Identities=6% Similarity=0.079 Sum_probs=20.7
Q ss_pred hhhhHHHHHHHHhccccccCCCC-CCCcccchhh
Q 014196 11 LQFFSRIRQFIQSKSARRRQNEP-NHNHEKSRTL 43 (429)
Q Consensus 11 ~~TydRIe~W~~~g~~~T~~~L~-~~~L~PN~~L 43 (429)
-++|+||+.|-+.|--+.|..-. +..|.++.++
T Consensus 14 ~~~fekieEiED~GL~kaM~Ev~dee~L~~eeA~ 47 (52)
T 3bpq_A 14 RKEYEKIEEILDIGLAKAMEETKDDELLTYDEIK 47 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTCCEECHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccCCHHHHH
Confidence 37899999996667443344333 3456666664
No 178
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=31.07 E-value=2.7e+02 Score=24.34 Aligned_cols=68 Identities=10% Similarity=0.121 Sum_probs=50.9
Q ss_pred HHHHhcccCCChhHHHHHHHHHHHHhhC-CHHHHHHHHhCCchHHHHHHhhcC-CHHHHHHHHHHHHHHHh
Q 014196 284 SLIEILTWEEKPKCQELSAYILMILAHQ-SSEQRDKMAKSGIVHVSLQLALLG-SPLAQRRASKLLQWFKD 352 (429)
Q Consensus 284 ~Lv~~L~~~~s~~~~e~A~~~L~~L~~~-~~~~~~~i~~~G~v~~L~~ll~~~-~~~~k~~A~~lL~~l~~ 352 (429)
+|.+-|. +.++..+..|+.+|-.+..+ .......+.....+..|..++... .+.+++++..+++....
T Consensus 49 al~krl~-~~n~~v~l~aL~LLe~~vkNcG~~f~~eias~~fl~~l~~l~~~~~~~~Vk~kil~li~~W~~ 118 (226)
T 3zyq_A 49 SIKKKVN-DKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKDLLKRQVEVNVRNKILYLIQAWAH 118 (226)
T ss_dssp HHHHHHT-CSSHHHHHHHHHHHHHHHHHHCHHHHHHHSSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHc-CCCHHHHHHHHHHHHHHHHhcchHHHHhhccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHH
Confidence 5777777 78999999998887776553 355666777777777787777653 57899999888877665
No 179
>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A
Probab=30.64 E-value=2.3e+02 Score=31.29 Aligned_cols=207 Identities=12% Similarity=0.098 Sum_probs=110.9
Q ss_pred cchhhHHHHHHHHHhhcccccCCCCCCCChhhHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHhhh-----chHHHHHHHh
Q 014196 39 KSRTLKNINCQEEKQVIIEEKNHEQSDIEEDDCVLLQKSVKRLHF-GSWEEKEMAAKEIEKLAKE-----DVKIKKLMAE 112 (429)
Q Consensus 39 PN~~Lr~lI~~W~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~L~~-~~~~~~~~Aa~~L~~La~~-----~~~~r~~i~~ 112 (429)
|+-.-|+-.++|...- ... ++.+..+...|.. .++..|.-|+..|++..+. +++.|..+.+
T Consensus 40 p~~~~r~qA~~~L~q~-----q~s--------p~aw~~~~~iL~~s~~~~vR~fAa~~L~~~I~~~W~~L~~e~~~~LR~ 106 (1073)
T 3gjx_A 40 GEGAQQRMAQEVLTHL-----KEH--------PDAWTRVDTILEFSQNMNTKYYGLQILENVIKTRWKILPRNQCEGIKK 106 (1073)
T ss_dssp SSHHHHHHHHHHHHTS-----SCC--------SCHHHHHTCC---CCSHHHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH-----HcC--------chHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhhhCCHHHHHHHHH
Confidence 4455677778887644 111 1124444444443 4788999999999987653 2344444433
Q ss_pred cCcHHHHHHhhcC-----CCHHHHHHHHHHHHHhccCCCc-hHHHHHhcCccchhhhhccCCCHHHHHHHHHHHHHhhcc
Q 014196 113 LGVIQMLVSMVST-----EVIGRRRAAIKALIQLANGTYT-NKAIMVEAGILTKLPKNVDAVDESTRHEFGELLLSLSSL 186 (429)
Q Consensus 113 ~G~i~~Lv~lL~s-----~~~~~~~~A~~aL~nLa~~~~~-nk~~iv~~G~i~~Lv~lL~~~~~~~~~~aa~~L~~Ls~~ 186 (429)
. .+..+...-.. .++.++...+.++..++..+-. .. .+.++-++.+++. +....+....+|..|+..
T Consensus 107 ~-Ll~~l~~~~~~~~~~e~~~~vinKLa~~La~I~k~~~P~~W-----p~fi~dLv~~~~~-~~~~~~~~L~IL~~L~EE 179 (1073)
T 3gjx_A 107 Y-VVGLIIKTSSDPTCVEKEKVYIGKLNMILVQILKQEWPKHW-----PTFISDIVGASRT-SESLCQNNMVILKLLSEE 179 (1073)
T ss_dssp H-HHHHHHHHHTCGGGGTSCHHHHHHHHHHHHHHHHHHTTTTC-----TTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHccCccccccchHHHHHHHHHHHHHHHHhChhhc-----cHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHH
Confidence 2 33334433222 2455666666667666654211 11 1233344444432 222333444455555432
Q ss_pred -CCC-------------cccccc--CCcHHHHHHhhhcCCcHHHHHHHHHHHHHhccCCCChhHHHhcCcHHHHH-Hhcc
Q 014196 187 -ANT-------------HIPLSS--SEILPFLVGILESGSSVETKELCIGALYNLSAVLDNARPMVSNGVVHTLL-KLCS 249 (429)
Q Consensus 187 -~~~-------------~~~i~~--~g~i~~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~n~~~iv~~G~v~~Lv-~lL~ 249 (429)
.+. +..+.. ...++.+..+|......++...++.+|......- ....+++.+.++.|+ .+|.
T Consensus 180 V~d~~~~~l~~~r~~~lk~~L~~~~~~Il~ll~~iL~~~~~~~lv~~~L~~L~~~~sWI-~i~~i~~~~ll~~L~~~~L~ 258 (1073)
T 3gjx_A 180 VFDFSSGQITQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWI-PLGYIFETKLISTLIYKFLN 258 (1073)
T ss_dssp HTTSHHHHBCHHHHHHHHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTTS-CTHHHHSSSHHHHHHHHTSS
T ss_pred HHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHhc-CHHHhccchHHHHHHHHhcC
Confidence 010 111221 1233344444544443366777888888887654 356788889999884 7775
Q ss_pred CCcchHHHHHHHHHHhhC
Q 014196 250 MKERLSEKSLATLGNLVV 267 (429)
Q Consensus 250 ~~~~~~~~a~~~L~~La~ 267 (429)
++ .++..|+.+|..+..
T Consensus 259 ~~-~~r~aA~dcL~eIv~ 275 (1073)
T 3gjx_A 259 VP-MFRNVSLKCLTEIAG 275 (1073)
T ss_dssp SH-HHHHHHHHHHHHHHH
T ss_pred Ch-HHHHHHHHHHHHHHh
Confidence 54 788899999988765
No 180
>3g2s_A C-terminal fragment of sortilin-related receptor; ADP-ribosylation factor binding protein GGA1, VHS, acidic- cluster dileucine signal, sorla; 1.70A {Homo sapiens} SCOP: a.118.9.2 PDB: 3g2t_A* 3g2u_A 3g2v_A* 3g2w_A 1ujk_A* 1jwf_A 1ujj_A 1jwg_A* 1py1_A*
Probab=29.54 E-value=2.3e+02 Score=23.09 Aligned_cols=68 Identities=10% Similarity=0.021 Sum_probs=52.6
Q ss_pred HHHHhcccCCChhHHHHHHHHHHHHhh-CCHHHHHHHHhCCchHHHHHHhhc------CCHHHHHHHHHHHHHHHh
Q 014196 284 SLIEILTWEEKPKCQELSAYILMILAH-QSSEQRDKMAKSGIVHVSLQLALL------GSPLAQRRASKLLQWFKD 352 (429)
Q Consensus 284 ~Lv~~L~~~~s~~~~e~A~~~L~~L~~-~~~~~~~~i~~~G~v~~L~~ll~~------~~~~~k~~A~~lL~~l~~ 352 (429)
+|.+-|. +.++..+..|+.+|-.+.. ........+.....+.-|+.++.. ..+.+|++...+++.-..
T Consensus 52 al~krl~-~~n~~v~l~AL~LLe~cvkNCG~~fh~eias~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~ 126 (149)
T 3g2s_A 52 LLAHKIQ-SPQEWEAIQALTVLETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWTV 126 (149)
T ss_dssp HHHHHHT-CSSHHHHHHHHHHHHHHHHHCCHHHHHHHTSHHHHHHHHHHHCTTTTGGGSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHc-CCCHHHHHHHHHHHHHHHHhcCHHHHHHHhhHHHHHHHHHHHcccccCCCCCHHHHHHHHHHHHHHHH
Confidence 6777777 7899999999887776554 346677778777888888888863 367899999888887775
No 181
>3o2t_A Symplekin; heat repeat, scaffold, protein binding; 1.40A {Homo sapiens} PDB: 3odr_A 3ods_A 4h3k_A* 3o2s_A 3o2q_A* 4h3h_A*
Probab=28.53 E-value=1.8e+02 Score=28.02 Aligned_cols=65 Identities=22% Similarity=0.212 Sum_probs=49.2
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhchHHHHHHHhcCcHHHHHHhhcCCCHHHHHHHHHHHHHh
Q 014196 72 VLLQKSVKRLHFGSWEEKEMAAKEIEKLAKEDVKIKKLMAELGVIQMLVSMVSTEVIGRRRAAIKALIQL 141 (429)
Q Consensus 72 ~~l~~lv~~L~~~~~~~~~~Aa~~L~~La~~~~~~r~~i~~~G~i~~Lv~lL~s~~~~~~~~A~~aL~nL 141 (429)
..++.++..-...+.++|+-.+..|...++.+.+.-. -+++.|..+|.+.|+.+...++.+..++
T Consensus 63 ~fl~~il~f~~d~~~~vRk~~a~FieEa~~~~~el~~-----~~l~~L~~LL~d~d~~V~K~~I~~~tsl 127 (386)
T 3o2t_A 63 NFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLL-----KLIANLNMLLRDENVNVVKKAILTMTQL 127 (386)
T ss_dssp GGHHHHHGGGGCSCHHHHHHHHHHHHHHHHHCGGGHH-----HHHHHHHHHHTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 4477777766677889999999999988876655422 2377888899988998888877766554
No 182
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=27.83 E-value=2.7e+02 Score=24.11 Aligned_cols=68 Identities=7% Similarity=0.082 Sum_probs=51.6
Q ss_pred HHHHhcccCCChhHHHHHHHHHHHHhhCC-HHHHHHHHhCCchHHHHHHhhcC-CHHHHHHHHHHHHHHHh
Q 014196 284 SLIEILTWEEKPKCQELSAYILMILAHQS-SEQRDKMAKSGIVHVSLQLALLG-SPLAQRRASKLLQWFKD 352 (429)
Q Consensus 284 ~Lv~~L~~~~s~~~~e~A~~~L~~L~~~~-~~~~~~i~~~G~v~~L~~ll~~~-~~~~k~~A~~lL~~l~~ 352 (429)
+|.+-|. +.++..+..|+.+|-.+..+. ......+.+...+..|+.++... ...+|+++..+++.-..
T Consensus 46 ~l~krl~-~~n~~~~l~aL~Lle~~vkNcG~~f~~eva~~~fl~~l~~l~~~~~~~~Vk~kil~li~~W~~ 115 (220)
T 1dvp_A 46 AIKKKMN-SPNPHSSCYSLLVLESIVKNCGAPVHEEVFTKENCEMFSSFLESTPHENVRQKMLELVQTWAY 115 (220)
T ss_dssp HHHHHHT-CSSHHHHHHHHHHHHHHHHHSHHHHHHHHSSHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHc-CCCHHHHHHHHHHHHHHHhccCHHHHHHHHhHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 5666677 789999999998888776654 45667777777888888887754 57899998887776664
No 183
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.67 E-value=30 Score=24.15 Aligned_cols=33 Identities=9% Similarity=0.005 Sum_probs=23.5
Q ss_pred hhhhhhHH--HHHHHHhccc--cccCCCCCCCcccch
Q 014196 9 MRLQFFSR--IRQFIQSKSA--RRRQNEPNHNHEKSR 41 (429)
Q Consensus 9 ~~~~TydR--Ie~W~~~g~~--~T~~~L~~~~L~PN~ 41 (429)
-=|++|=+ |++|++.... ..++++...++.+|.
T Consensus 33 ~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~~ 69 (72)
T 2djb_A 33 ECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLSGP 69 (72)
T ss_dssp SSCCEECHHHHHHHHHHCSSCTTTCCCCCSSCSCCCC
T ss_pred CCCCHHHHHHHHHHHHcCCcCCCcCcccCcccccccC
Confidence 34688888 9999976544 667777666666653
No 184
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=21.90 E-value=28 Score=23.31 Aligned_cols=15 Identities=13% Similarity=0.188 Sum_probs=12.3
Q ss_pred hhhhhhHH-HHHHHHh
Q 014196 9 MRLQFFSR-IRQFIQS 23 (429)
Q Consensus 9 ~~~~TydR-Ie~W~~~ 23 (429)
.+|+||-| |++||++
T Consensus 38 ~~G~~~~~~~~~~~~~ 53 (53)
T 3lcz_A 38 AQGSTLLHFIKKHIHE 53 (53)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred EeCchHHHHHHHHhcC
Confidence 46889988 9999964
No 185
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=21.85 E-value=27 Score=23.38 Aligned_cols=31 Identities=10% Similarity=0.135 Sum_probs=21.5
Q ss_pred hhhhhHH--HHHHHHhccc--cccCCCCCCCcccc
Q 014196 10 RLQFFSR--IRQFIQSKSA--RRRQNEPNHNHEKS 40 (429)
Q Consensus 10 ~~~TydR--Ie~W~~~g~~--~T~~~L~~~~L~PN 40 (429)
=|++|=+ |++|+..... ..++++...++.|+
T Consensus 28 CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~ 62 (64)
T 2xeu_A 28 CGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPI 62 (64)
T ss_dssp TSCEEEHHHHHHHHHHCSBCTTTCCBCTTTCEEEC
T ss_pred CCCchhHHHHHHHHHcCCCCCCCCccCCccceeee
Confidence 3677877 9999987544 66666666566554
No 186
>1pgy_A SWA2P; UBA, ubiquitin, auxilin, ubiquitin-associated domain, protein binding; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=20.60 E-value=32 Score=21.99 Aligned_cols=16 Identities=13% Similarity=0.223 Sum_probs=12.0
Q ss_pred cchhhhhhhhHH-HHHH
Q 014196 5 SSSYMRLQFFSR-IRQF 20 (429)
Q Consensus 5 ~~~~~~~~TydR-Ie~W 20 (429)
.+.|-+|.+||+ |++-
T Consensus 25 ~~~Ye~gi~ye~~ie~~ 41 (47)
T 1pgy_A 25 TEFYENDVTYERYLEIL 41 (47)
T ss_dssp HHHHHHHCSSHHHHHHH
T ss_pred HHHHHcCchHHHHHHHH
Confidence 356889999999 7653
Done!