Query 014198
Match_columns 429
No_of_seqs 330 out of 2910
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 07:14:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014198.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014198hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1y56_B Sarcosine oxidase; dehy 100.0 1.4E-42 4.9E-47 329.6 25.8 351 52-428 4-373 (382)
2 3nyc_A D-arginine dehydrogenas 100.0 3.4E-42 1.2E-46 327.0 22.4 350 52-425 8-380 (381)
3 1ryi_A Glycine oxidase; flavop 100.0 5.2E-41 1.8E-45 318.9 20.7 347 51-427 15-380 (382)
4 2gf3_A MSOX, monomeric sarcosi 100.0 3.7E-40 1.3E-44 313.8 26.5 355 53-427 3-381 (389)
5 2gag_B Heterotetrameric sarcos 100.0 5.5E-40 1.9E-44 314.3 23.9 352 51-427 19-392 (405)
6 3axb_A Putative oxidoreductase 100.0 1E-39 3.4E-44 316.4 25.4 351 52-428 22-445 (448)
7 2uzz_A N-methyl-L-tryptophan o 100.0 3.9E-39 1.3E-43 304.9 20.5 350 53-425 2-372 (372)
8 3ps9_A TRNA 5-methylaminomethy 100.0 1.2E-38 4E-43 323.1 23.5 350 52-427 271-665 (676)
9 3pvc_A TRNA 5-methylaminomethy 100.0 1E-38 3.6E-43 323.7 23.1 349 52-427 263-669 (689)
10 2oln_A NIKD protein; flavoprot 100.0 5.7E-37 1.9E-41 292.5 32.8 358 52-427 3-391 (397)
11 3dme_A Conserved exported prot 100.0 7.6E-37 2.6E-41 288.8 23.7 335 52-406 3-367 (369)
12 3dje_A Fructosyl amine: oxygen 100.0 5.9E-36 2E-40 289.1 22.1 352 51-423 4-397 (438)
13 1pj5_A N,N-dimethylglycine oxi 100.0 8.8E-35 3E-39 301.0 22.7 351 52-426 3-395 (830)
14 1c0p_A D-amino acid oxidase; a 100.0 2E-34 7E-39 271.4 22.0 315 51-407 4-355 (363)
15 3g3e_A D-amino-acid oxidase; F 100.0 9.5E-35 3.2E-39 272.4 17.1 331 54-425 1-348 (351)
16 3c4n_A Uncharacterized protein 100.0 3.8E-33 1.3E-37 266.2 21.9 327 52-409 35-397 (405)
17 2qcu_A Aerobic glycerol-3-phos 100.0 2.6E-29 9E-34 245.8 31.6 330 53-408 3-371 (501)
18 2rgh_A Alpha-glycerophosphate 100.0 4.5E-28 1.5E-32 239.8 30.1 334 52-407 31-409 (571)
19 3da1_A Glycerol-3-phosphate de 100.0 2.9E-28 1E-32 240.6 23.6 333 52-407 17-389 (561)
20 3cgv_A Geranylgeranyl reductas 99.8 4.6E-19 1.6E-23 168.6 18.8 292 53-407 4-312 (397)
21 3oz2_A Digeranylgeranylglycero 99.8 1.5E-17 5.2E-22 157.9 25.0 292 53-406 4-311 (397)
22 3nix_A Flavoprotein/dehydrogen 99.8 7.7E-18 2.6E-22 161.4 18.6 300 53-407 5-323 (421)
23 3atr_A Conserved archaeal prot 99.7 5.5E-17 1.9E-21 156.7 20.0 287 53-407 6-317 (453)
24 2qa2_A CABE, polyketide oxygen 99.7 6.9E-16 2.4E-20 150.3 23.8 306 51-423 10-332 (499)
25 3i3l_A Alkylhalidase CMLS; fla 99.7 1.8E-16 6.2E-21 156.7 19.7 304 52-407 22-343 (591)
26 2qa1_A PGAE, polyketide oxygen 99.7 3.3E-15 1.1E-19 145.5 26.8 306 51-423 9-331 (500)
27 3rp8_A Flavoprotein monooxygen 99.7 2.1E-16 7.2E-21 150.6 18.1 295 51-407 21-336 (407)
28 2weu_A Tryptophan 5-halogenase 99.7 6.4E-16 2.2E-20 151.7 20.1 202 181-407 165-373 (511)
29 3fmw_A Oxygenase; mithramycin, 99.7 1.2E-15 4.1E-20 150.6 20.2 291 52-406 48-356 (570)
30 3e1t_A Halogenase; flavoprotei 99.7 2E-15 7E-20 147.9 19.9 170 52-255 6-180 (512)
31 3ihg_A RDME; flavoenzyme, anth 99.7 2.4E-15 8.3E-20 148.3 19.7 175 52-260 4-196 (535)
32 2gmh_A Electron transfer flavo 99.7 2.3E-14 7.9E-19 142.1 25.6 165 52-251 34-221 (584)
33 2aqj_A Tryptophan halogenase, 99.6 5.4E-15 1.9E-19 145.8 18.4 202 180-407 156-365 (538)
34 2x3n_A Probable FAD-dependent 99.6 2.6E-15 8.9E-20 142.7 14.0 167 53-256 6-175 (399)
35 1qo8_A Flavocytochrome C3 fuma 99.6 4.3E-15 1.5E-19 147.2 15.4 164 52-251 120-316 (566)
36 2e4g_A Tryptophan halogenase; 99.6 1.3E-14 4.3E-19 143.4 18.0 201 181-407 186-396 (550)
37 1y0p_A Fumarate reductase flav 99.6 1.2E-14 4.1E-19 144.3 17.4 165 52-251 125-321 (571)
38 1k0i_A P-hydroxybenzoate hydro 99.6 1.8E-14 6.2E-19 136.6 17.9 162 53-254 2-170 (394)
39 4at0_A 3-ketosteroid-delta4-5a 99.6 1.9E-14 6.4E-19 140.9 16.0 191 51-251 39-268 (510)
40 3alj_A 2-methyl-3-hydroxypyrid 99.6 2.8E-14 9.6E-19 134.5 16.3 154 53-254 11-167 (379)
41 2pyx_A Tryptophan halogenase; 99.6 7.5E-13 2.6E-17 130.1 23.7 202 181-406 167-379 (526)
42 3ka7_A Oxidoreductase; structu 99.5 1.1E-13 3.8E-18 132.5 17.4 207 189-407 196-424 (425)
43 2dkh_A 3-hydroxybenzoate hydro 99.5 3.3E-13 1.1E-17 135.4 21.2 171 52-258 31-222 (639)
44 2h88_A Succinate dehydrogenase 99.5 2.8E-13 9.7E-18 134.4 19.2 175 52-249 17-219 (621)
45 2bs2_A Quinol-fumarate reducta 99.5 2.5E-13 8.6E-18 135.7 18.7 179 53-250 5-223 (660)
46 3nlc_A Uncharacterized protein 99.5 1.7E-13 5.7E-18 133.6 16.1 68 181-250 212-280 (549)
47 2wdq_A Succinate dehydrogenase 99.5 5.2E-13 1.8E-17 132.3 19.6 176 52-250 6-209 (588)
48 2i0z_A NAD(FAD)-utilizing dehy 99.5 9.5E-14 3.3E-18 133.6 13.8 58 188-247 133-191 (447)
49 1d4d_A Flavocytochrome C fumar 99.5 2.5E-13 8.7E-18 134.5 16.0 163 52-250 125-320 (572)
50 1rp0_A ARA6, thiazole biosynth 99.5 5.8E-13 2E-17 120.1 16.7 138 53-248 39-192 (284)
51 2xdo_A TETX2 protein; tetracyc 99.5 6.6E-13 2.3E-17 126.0 18.0 163 52-253 25-188 (398)
52 4dgk_A Phytoene dehydrogenase; 99.5 4.5E-13 1.6E-17 131.1 17.1 58 189-248 221-279 (501)
53 1kf6_A Fumarate reductase flav 99.5 1.4E-12 4.7E-17 129.5 20.4 163 53-251 5-201 (602)
54 3v76_A Flavoprotein; structura 99.5 2.2E-13 7.6E-18 129.2 13.8 150 51-247 25-187 (417)
55 2r0c_A REBC; flavin adenine di 99.5 3.2E-12 1.1E-16 126.1 22.4 172 53-259 26-208 (549)
56 1pn0_A Phenol 2-monooxygenase; 99.5 1.7E-12 5.7E-17 130.6 20.4 318 53-423 8-405 (665)
57 3c96_A Flavin-containing monoo 99.5 5.1E-13 1.7E-17 127.3 15.7 158 53-254 4-176 (410)
58 4hb9_A Similarities with proba 99.5 1.6E-13 5.6E-18 130.7 12.2 66 184-254 107-173 (412)
59 1chu_A Protein (L-aspartate ox 99.5 1.9E-13 6.4E-18 134.2 12.4 168 52-250 7-211 (540)
60 1yvv_A Amine oxidase, flavin-c 99.5 8.9E-12 3.1E-16 115.3 21.8 34 53-86 2-35 (336)
61 3i6d_A Protoporphyrinogen oxid 99.5 3.2E-12 1.1E-16 124.0 19.3 206 190-407 236-465 (470)
62 2cul_A Glucose-inhibited divis 99.4 7E-13 2.4E-17 115.8 12.6 125 53-251 3-129 (232)
63 2e5v_A L-aspartate oxidase; ar 99.4 2E-12 6.8E-17 125.0 16.3 157 55-250 1-179 (472)
64 3nrn_A Uncharacterized protein 99.4 1.2E-11 4.1E-16 118.2 20.3 56 189-249 189-245 (421)
65 3nks_A Protoporphyrinogen oxid 99.4 6.1E-12 2.1E-16 122.3 18.0 213 190-409 235-473 (477)
66 2gqf_A Hypothetical protein HI 99.4 1.7E-12 5.8E-17 122.7 12.9 58 187-247 107-168 (401)
67 3qj4_A Renalase; FAD/NAD(P)-bi 99.4 5.7E-11 1.9E-15 110.2 22.3 193 201-407 120-339 (342)
68 3jsk_A Cypbp37 protein; octame 99.4 1.4E-11 4.7E-16 112.1 17.0 138 53-248 79-252 (344)
69 1w4x_A Phenylacetone monooxyge 99.4 9.3E-13 3.2E-17 129.8 9.6 169 187-376 92-270 (542)
70 3lxd_A FAD-dependent pyridine 99.4 1.3E-12 4.5E-17 124.6 10.2 139 3-249 110-253 (415)
71 2zxi_A TRNA uridine 5-carboxym 99.4 5.9E-12 2E-16 123.2 14.9 62 184-248 118-181 (637)
72 3ces_A MNMG, tRNA uridine 5-ca 99.4 4.8E-12 1.6E-16 124.3 13.5 152 52-248 27-182 (651)
73 3fg2_P Putative rubredoxin red 99.4 1.1E-12 3.8E-17 124.6 8.3 140 2-249 100-243 (404)
74 3cp8_A TRNA uridine 5-carboxym 99.4 8.2E-12 2.8E-16 122.6 14.5 156 51-250 19-177 (641)
75 4fk1_A Putative thioredoxin re 99.3 5.5E-12 1.9E-16 115.0 12.3 114 51-248 4-118 (304)
76 3gyx_A Adenylylsulfate reducta 99.3 7.2E-12 2.5E-16 125.1 14.0 177 52-249 21-235 (662)
77 3ef6_A Toluene 1,2-dioxygenase 99.3 5.4E-13 1.8E-17 126.9 5.1 138 2-249 101-243 (410)
78 2vou_A 2,6-dihydroxypyridine h 99.3 4.1E-11 1.4E-15 113.5 17.8 154 52-254 4-160 (397)
79 2v3a_A Rubredoxin reductase; a 99.3 2.2E-12 7.6E-17 121.6 8.4 137 3-249 104-245 (384)
80 1jnr_A Adenylylsulfate reducta 99.3 3.9E-11 1.3E-15 120.2 17.3 63 185-249 147-220 (643)
81 3oc4_A Oxidoreductase, pyridin 99.3 2.3E-12 7.9E-17 124.2 8.1 137 3-249 106-246 (452)
82 2gjc_A Thiazole biosynthetic e 99.3 4.4E-11 1.5E-15 108.2 15.9 140 53-250 65-242 (326)
83 3lov_A Protoporphyrinogen oxid 99.3 6.7E-11 2.3E-15 114.9 18.1 203 190-408 237-463 (475)
84 4a9w_A Monooxygenase; baeyer-v 99.3 2E-11 7E-16 113.7 13.4 131 53-249 3-134 (357)
85 2bry_A NEDD9 interacting prote 99.3 1.6E-11 5.4E-16 119.5 12.8 138 51-251 90-234 (497)
86 2ywl_A Thioredoxin reductase r 99.3 3.6E-11 1.2E-15 100.5 12.8 115 54-254 2-117 (180)
87 2eq6_A Pyruvate dehydrogenase 99.3 3.6E-12 1.2E-16 123.2 7.4 131 3-249 134-273 (464)
88 1q1r_A Putidaredoxin reductase 99.3 1.8E-12 6.2E-17 124.0 4.8 138 3-248 105-251 (431)
89 2yqu_A 2-oxoglutarate dehydrog 99.3 2.4E-12 8.1E-17 124.3 5.0 130 3-249 132-266 (455)
90 3ab1_A Ferredoxin--NADP reduct 99.3 3.1E-11 1.1E-15 112.8 12.4 118 52-247 13-131 (360)
91 1mo9_A ORF3; nucleotide bindin 99.3 5.5E-12 1.9E-16 123.7 7.4 134 3-249 177-318 (523)
92 2cdu_A NADPH oxidase; flavoenz 99.3 2.3E-12 7.8E-17 124.3 4.5 138 3-249 108-249 (452)
93 1nhp_A NADH peroxidase; oxidor 99.3 2.1E-12 7E-17 124.4 4.1 138 3-249 106-248 (447)
94 3gwf_A Cyclohexanone monooxyge 99.3 4.2E-11 1.4E-15 117.4 13.4 135 53-250 8-150 (540)
95 3f8d_A Thioredoxin reductase ( 99.2 6.9E-11 2.3E-15 108.5 13.1 112 52-248 14-126 (323)
96 4b1b_A TRXR, thioredoxin reduc 99.2 4.8E-12 1.6E-16 123.5 5.6 129 3-248 188-320 (542)
97 2zbw_A Thioredoxin reductase; 99.2 6.6E-11 2.3E-15 109.4 13.0 117 52-247 4-121 (335)
98 1ges_A Glutathione reductase; 99.2 4.1E-12 1.4E-16 122.3 4.6 130 3-249 134-267 (450)
99 1onf_A GR, grase, glutathione 99.2 1.4E-11 4.7E-16 120.2 8.4 129 3-249 144-277 (500)
100 1v59_A Dihydrolipoamide dehydr 99.2 5.1E-12 1.8E-16 122.8 5.3 132 3-249 148-289 (478)
101 2wpf_A Trypanothione reductase 99.2 7.3E-12 2.5E-16 121.9 6.3 131 3-249 158-294 (495)
102 4ap3_A Steroid monooxygenase; 99.2 8.7E-11 3E-15 115.4 13.8 137 52-249 20-161 (549)
103 3lzw_A Ferredoxin--NADP reduct 99.2 6.2E-11 2.1E-15 109.3 12.1 115 53-246 7-122 (332)
104 2gqw_A Ferredoxin reductase; f 99.2 6.7E-12 2.3E-16 119.2 5.3 132 3-248 104-240 (408)
105 3fbs_A Oxidoreductase; structu 99.2 7.5E-11 2.6E-15 106.9 12.0 111 53-248 2-113 (297)
106 2q7v_A Thioredoxin reductase; 99.2 1.1E-10 3.6E-15 107.5 12.9 116 52-248 7-124 (325)
107 1fec_A Trypanothione reductase 99.2 9E-12 3.1E-16 121.2 5.8 131 3-249 154-290 (490)
108 3c4a_A Probable tryptophan hyd 99.2 1E-11 3.6E-16 117.0 6.0 197 184-408 93-298 (381)
109 2q0l_A TRXR, thioredoxin reduc 99.2 1.4E-10 4.7E-15 106.0 12.4 113 54-248 2-115 (311)
110 3iwa_A FAD-dependent pyridine 99.2 1.1E-11 3.7E-16 120.3 5.1 139 3-249 116-260 (472)
111 2hqm_A GR, grase, glutathione 99.2 1.2E-11 4.1E-16 120.0 5.5 131 3-249 151-287 (479)
112 3ihm_A Styrene monooxygenase A 99.2 3.8E-10 1.3E-14 107.9 15.4 36 51-86 20-55 (430)
113 2r9z_A Glutathione amide reduc 99.2 1.2E-11 3.9E-16 119.6 4.8 129 3-249 133-266 (463)
114 1ebd_A E3BD, dihydrolipoamide 99.2 1.8E-11 6E-16 118.2 6.0 129 3-248 136-271 (455)
115 3uox_A Otemo; baeyer-villiger 99.2 8.8E-11 3E-15 115.3 11.1 140 52-251 8-151 (545)
116 3itj_A Thioredoxin reductase 1 99.2 1.1E-10 3.9E-15 107.8 11.1 121 51-248 20-143 (338)
117 4a5l_A Thioredoxin reductase; 99.2 1.8E-10 6E-15 105.5 12.2 121 51-248 2-122 (314)
118 1zmd_A Dihydrolipoyl dehydroge 99.2 1.3E-11 4.4E-16 119.8 4.7 132 3-249 143-284 (474)
119 1xdi_A RV3303C-LPDA; reductase 99.2 2E-11 6.8E-16 119.2 5.8 130 3-249 147-281 (499)
120 1xhc_A NADH oxidase /nitrite r 99.2 2.5E-12 8.6E-17 120.3 -0.5 130 3-249 104-236 (367)
121 3cgb_A Pyridine nucleotide-dis 99.2 1.3E-11 4.6E-16 119.7 4.4 136 3-248 143-283 (480)
122 4gde_A UDP-galactopyranose mut 99.1 2.7E-09 9.4E-14 104.5 20.6 52 189-245 222-274 (513)
123 2bc0_A NADH oxidase; flavoprot 99.1 2.1E-11 7E-16 118.7 5.1 99 53-249 194-293 (490)
124 3ntd_A FAD-dependent pyridine 99.1 1.6E-11 5.6E-16 121.9 4.5 139 3-248 108-268 (565)
125 1fl2_A Alkyl hydroperoxide red 99.1 3E-10 1E-14 103.7 12.4 114 53-248 1-116 (310)
126 2ivd_A PPO, PPOX, protoporphyr 99.1 2.1E-09 7.1E-14 104.4 18.9 202 189-407 238-470 (478)
127 1zk7_A HGII, reductase, mercur 99.1 2.9E-11 9.9E-16 117.1 5.6 130 2-249 140-273 (467)
128 1ojt_A Surface protein; redox- 99.1 2.9E-11 1E-15 117.5 5.5 131 3-249 151-288 (482)
129 3cty_A Thioredoxin reductase; 99.1 3.3E-10 1.1E-14 103.9 12.3 114 51-248 14-127 (319)
130 2gv8_A Monooxygenase; FMO, FAD 99.1 3.7E-10 1.3E-14 108.6 13.1 61 186-249 112-179 (447)
131 3d1c_A Flavin-containing putat 99.1 3.1E-10 1.1E-14 106.3 11.9 60 185-248 84-144 (369)
132 4eqs_A Coenzyme A disulfide re 99.1 1.3E-11 4.4E-16 118.2 2.3 132 3-248 107-241 (437)
133 3lad_A Dihydrolipoamide dehydr 99.1 5.9E-11 2E-15 115.2 6.9 129 3-248 145-281 (476)
134 1lvl_A Dihydrolipoamide dehydr 99.1 1.3E-11 4.6E-16 119.0 2.2 66 3-86 137-204 (458)
135 2a87_A TRXR, TR, thioredoxin r 99.1 2.5E-10 8.7E-15 105.5 10.5 115 51-248 12-127 (335)
136 4dna_A Probable glutathione re 99.1 4.8E-11 1.7E-15 115.3 5.7 130 3-250 136-271 (463)
137 3urh_A Dihydrolipoyl dehydroge 99.1 6.3E-11 2.2E-15 115.4 6.0 130 3-249 161-302 (491)
138 1m6i_A Programmed cell death p 99.1 4.3E-11 1.5E-15 116.4 4.8 54 193-249 230-284 (493)
139 4gcm_A TRXR, thioredoxin reduc 99.1 8.2E-10 2.8E-14 100.9 13.1 39 51-89 4-42 (312)
140 2a8x_A Dihydrolipoyl dehydroge 99.1 7.1E-11 2.4E-15 114.2 5.9 130 3-249 137-273 (464)
141 3o0h_A Glutathione reductase; 99.1 8.3E-11 2.8E-15 114.3 6.2 130 3-249 157-290 (484)
142 3kd9_A Coenzyme A disulfide re 99.1 4.5E-11 1.5E-15 115.1 4.2 137 3-248 105-245 (449)
143 1trb_A Thioredoxin reductase; 99.1 4.1E-10 1.4E-14 103.3 10.4 113 53-248 5-117 (320)
144 3p1w_A Rabgdi protein; GDI RAB 99.1 4.2E-10 1.4E-14 107.4 10.7 57 189-246 256-313 (475)
145 2qae_A Lipoamide, dihydrolipoy 99.1 8.3E-11 2.8E-15 113.9 5.7 66 3-86 139-207 (468)
146 1dxl_A Dihydrolipoamide dehydr 99.1 4.2E-11 1.4E-15 116.1 3.4 130 3-249 142-281 (470)
147 1vdc_A NTR, NADPH dependent th 99.1 4.7E-10 1.6E-14 103.5 10.2 59 186-248 67-125 (333)
148 3dgh_A TRXR-1, thioredoxin red 99.1 9.1E-11 3.1E-15 114.0 5.4 130 3-248 153-290 (483)
149 2xve_A Flavin-containing monoo 99.1 8.3E-10 2.8E-14 106.5 11.8 65 185-250 97-169 (464)
150 3dk9_A Grase, GR, glutathione 99.1 1.6E-10 5.5E-15 112.2 6.9 131 3-249 151-295 (478)
151 3ic9_A Dihydrolipoamide dehydr 99.0 1.4E-10 4.9E-15 112.7 6.2 129 3-249 139-276 (492)
152 3ics_A Coenzyme A-disulfide re 99.0 5.9E-11 2E-15 118.3 3.4 136 3-249 143-284 (588)
153 1hyu_A AHPF, alkyl hydroperoxi 99.0 1.4E-09 4.9E-14 106.4 12.6 116 51-248 210-327 (521)
154 3klj_A NAD(FAD)-dependent dehy 99.0 6.6E-12 2.2E-16 118.1 -5.3 71 3-86 107-179 (385)
155 3k7m_X 6-hydroxy-L-nicotine ox 99.0 1.8E-09 6.3E-14 103.3 11.6 39 54-92 2-41 (431)
156 3r9u_A Thioredoxin reductase; 99.0 1.7E-09 5.8E-14 98.8 10.6 112 52-247 3-118 (315)
157 1trb_A Thioredoxin reductase; 99.0 1.1E-09 3.9E-14 100.3 9.3 98 53-249 145-249 (320)
158 3dgz_A Thioredoxin reductase 2 99.0 4.1E-10 1.4E-14 109.5 6.3 130 3-248 150-288 (488)
159 3qfa_A Thioredoxin reductase 1 99.0 4E-10 1.4E-14 110.3 6.0 66 3-86 176-243 (519)
160 2bcg_G Secretory pathway GDP d 99.0 1.3E-08 4.3E-13 98.0 16.1 60 189-250 242-303 (453)
161 4g6h_A Rotenone-insensitive NA 98.9 1.4E-10 4.9E-15 112.7 1.6 56 193-251 276-336 (502)
162 1ojt_A Surface protein; redox- 98.9 3.6E-09 1.2E-13 102.7 11.3 35 52-86 5-39 (482)
163 3s5w_A L-ornithine 5-monooxyge 98.9 8.2E-09 2.8E-13 99.7 12.5 58 188-246 126-191 (463)
164 1zk7_A HGII, reductase, mercur 98.9 1.3E-08 4.4E-13 98.4 13.9 37 52-88 3-39 (467)
165 3d1c_A Flavin-containing putat 98.9 1.3E-08 4.6E-13 95.1 12.8 105 53-249 166-274 (369)
166 3l8k_A Dihydrolipoyl dehydroge 98.9 8.1E-10 2.8E-14 106.8 4.5 69 3-86 135-205 (466)
167 3sx6_A Sulfide-quinone reducta 98.9 2.1E-09 7.2E-14 103.0 7.0 109 53-250 4-115 (437)
168 3l8k_A Dihydrolipoyl dehydroge 98.9 9.7E-09 3.3E-13 99.2 11.7 35 52-86 3-37 (466)
169 1v59_A Dihydrolipoamide dehydr 98.9 5.4E-09 1.8E-13 101.4 9.5 34 53-86 5-38 (478)
170 1d5t_A Guanine nucleotide diss 98.9 2.3E-08 7.7E-13 95.6 13.5 59 189-250 234-293 (433)
171 3itj_A Thioredoxin reductase 1 98.9 1.8E-09 6E-14 99.8 5.7 95 53-249 173-273 (338)
172 2x8g_A Thioredoxin glutathione 98.9 2.3E-09 8E-14 106.9 6.9 66 3-86 252-319 (598)
173 3o0h_A Glutathione reductase; 98.9 1.5E-08 5.2E-13 98.3 12.5 38 52-89 25-62 (484)
174 3r9u_A Thioredoxin reductase; 98.9 2.8E-09 9.6E-14 97.3 6.9 48 201-249 194-246 (315)
175 3s5w_A L-ornithine 5-monooxyge 98.9 3.1E-09 1.1E-13 102.7 7.5 34 53-86 227-262 (463)
176 1s3e_A Amine oxidase [flavin-c 98.9 2.5E-08 8.7E-13 97.8 14.0 53 190-248 216-269 (520)
177 1q1r_A Putidaredoxin reductase 98.8 4E-09 1.4E-13 100.8 7.7 35 52-86 3-39 (431)
178 3urh_A Dihydrolipoyl dehydroge 98.8 2.6E-08 8.9E-13 96.9 13.5 35 52-86 24-58 (491)
179 1fl2_A Alkyl hydroperoxide red 98.8 3.7E-09 1.3E-13 96.4 6.9 93 53-248 144-243 (310)
180 3k30_A Histamine dehydrogenase 98.8 2.7E-09 9.2E-14 108.1 6.1 34 53-86 523-558 (690)
181 3klj_A NAD(FAD)-dependent dehy 98.8 1E-08 3.5E-13 96.2 9.6 36 51-86 7-42 (385)
182 1ebd_A E3BD, dihydrolipoamide 98.8 2.5E-08 8.5E-13 96.1 12.3 35 53-87 3-37 (455)
183 2q0l_A TRXR, thioredoxin reduc 98.8 1.1E-08 3.7E-13 93.3 9.4 34 53-86 143-176 (311)
184 2r9z_A Glutathione amide reduc 98.8 2.9E-08 9.8E-13 95.7 12.7 37 52-88 3-39 (463)
185 1dxl_A Dihydrolipoamide dehydr 98.8 2.2E-08 7.5E-13 96.9 11.9 36 51-86 4-39 (470)
186 2a8x_A Dihydrolipoyl dehydroge 98.8 2.7E-08 9.2E-13 96.1 12.4 35 53-87 3-37 (464)
187 3qfa_A Thioredoxin reductase 1 98.8 3.5E-08 1.2E-12 96.5 13.0 36 51-86 30-65 (519)
188 3hyw_A Sulfide-quinone reducta 98.8 7.8E-10 2.7E-14 105.7 1.1 42 201-246 67-108 (430)
189 1zmd_A Dihydrolipoyl dehydroge 98.8 2.8E-08 9.4E-13 96.3 12.0 35 52-86 5-39 (474)
190 3f8d_A Thioredoxin reductase ( 98.8 7.2E-09 2.5E-13 94.9 7.5 34 53-86 154-187 (323)
191 3oc4_A Oxidoreductase, pyridin 98.8 1.3E-08 4.4E-13 98.0 9.4 33 54-86 3-37 (452)
192 3cty_A Thioredoxin reductase; 98.8 1.1E-08 3.8E-13 93.7 8.5 93 53-248 155-253 (319)
193 3dk9_A Grase, GR, glutathione 98.8 3.5E-08 1.2E-12 95.7 12.1 38 52-89 19-56 (478)
194 1ges_A Glutathione reductase; 98.8 3.4E-08 1.2E-12 94.9 11.9 37 52-88 3-39 (450)
195 2hqm_A GR, grase, glutathione 98.8 3.8E-08 1.3E-12 95.3 12.3 37 52-88 10-46 (479)
196 2qae_A Lipoamide, dihydrolipoy 98.8 5.7E-08 1.9E-12 93.9 13.3 34 53-86 2-35 (468)
197 3lad_A Dihydrolipoamide dehydr 98.8 2.9E-08 9.9E-13 96.2 11.3 35 52-86 2-36 (476)
198 3dgz_A Thioredoxin reductase 2 98.8 3.1E-08 1.1E-12 96.2 11.2 36 51-86 4-39 (488)
199 4a5l_A Thioredoxin reductase; 98.8 1.8E-08 6.1E-13 92.0 9.0 34 53-86 152-185 (314)
200 3lxd_A FAD-dependent pyridine 98.8 1.8E-08 6.3E-13 95.8 9.3 35 52-86 8-44 (415)
201 4dna_A Probable glutathione re 98.8 3.2E-08 1.1E-12 95.5 10.7 38 52-89 4-41 (463)
202 1vdc_A NTR, NADPH dependent th 98.7 1.4E-08 4.9E-13 93.5 7.8 34 53-86 159-192 (333)
203 3qvp_A Glucose oxidase; oxidor 98.7 5.3E-08 1.8E-12 95.7 12.2 36 51-86 17-53 (583)
204 3ef6_A Toluene 1,2-dioxygenase 98.7 2.4E-08 8.4E-13 94.7 9.6 33 54-86 3-37 (410)
205 2zbw_A Thioredoxin reductase; 98.7 4.7E-08 1.6E-12 90.1 11.2 96 53-248 152-253 (335)
206 2eq6_A Pyruvate dehydrogenase 98.7 6.2E-08 2.1E-12 93.5 12.3 35 53-87 6-40 (464)
207 2q7v_A Thioredoxin reductase; 98.7 2.7E-08 9.3E-13 91.3 9.4 34 53-86 152-185 (325)
208 2vvm_A Monoamine oxidase N; FA 98.7 2.7E-07 9.2E-12 89.9 16.9 57 189-248 255-313 (495)
209 1cjc_A Protein (adrenodoxin re 98.7 7.6E-08 2.6E-12 92.5 12.7 47 203-249 270-335 (460)
210 3h28_A Sulfide-quinone reducta 98.7 1.8E-08 6E-13 96.4 8.2 34 53-86 2-37 (430)
211 4gut_A Lysine-specific histone 98.7 1.5E-07 5E-12 95.8 14.9 38 52-89 335-373 (776)
212 2wpf_A Trypanothione reductase 98.7 3.8E-08 1.3E-12 95.7 10.2 33 52-84 6-39 (495)
213 3gwf_A Cyclohexanone monooxyge 98.7 3.4E-07 1.2E-11 89.7 16.9 35 52-86 177-211 (540)
214 2yqu_A 2-oxoglutarate dehydrog 98.7 6.7E-08 2.3E-12 93.1 11.7 33 54-86 2-34 (455)
215 1xdi_A RV3303C-LPDA; reductase 98.7 7.7E-08 2.6E-12 93.7 12.2 35 53-87 2-39 (499)
216 3iwa_A FAD-dependent pyridine 98.7 2.6E-08 8.9E-13 96.4 8.8 34 53-86 3-38 (472)
217 3fg2_P Putative rubredoxin red 98.7 6.3E-08 2.1E-12 91.7 11.2 33 54-86 2-36 (404)
218 3h8l_A NADH oxidase; membrane 98.7 1.1E-08 3.7E-13 97.2 5.9 33 54-86 2-37 (409)
219 1onf_A GR, grase, glutathione 98.7 4.2E-08 1.4E-12 95.6 10.0 35 53-87 2-36 (500)
220 3ab1_A Ferredoxin--NADP reduct 98.7 4.3E-08 1.5E-12 91.3 9.7 97 53-248 163-264 (360)
221 1xhc_A NADH oxidase /nitrite r 98.7 1.7E-08 5.8E-13 94.2 6.8 33 53-86 8-40 (367)
222 2jbv_A Choline oxidase; alcoho 98.7 3.3E-08 1.1E-12 97.1 9.0 59 193-251 212-278 (546)
223 3kd9_A Coenzyme A disulfide re 98.7 4.9E-08 1.7E-12 93.9 10.0 34 53-86 3-38 (449)
224 3dgh_A TRXR-1, thioredoxin red 98.7 8.3E-08 2.8E-12 93.1 11.6 35 51-85 7-41 (483)
225 1fec_A Trypanothione reductase 98.7 9.7E-08 3.3E-12 92.7 11.9 31 53-83 3-34 (490)
226 2gqw_A Ferredoxin reductase; f 98.7 2.6E-08 9.1E-13 94.4 7.7 35 52-86 6-42 (408)
227 3lzw_A Ferredoxin--NADP reduct 98.7 7.3E-08 2.5E-12 88.5 10.4 34 53-86 154-187 (332)
228 1lvl_A Dihydrolipoamide dehydr 98.7 1.1E-07 3.7E-12 91.6 11.8 37 52-88 4-40 (458)
229 3kkj_A Amine oxidase, flavin-c 98.7 1.7E-08 5.7E-13 90.5 5.6 37 53-89 2-39 (336)
230 1hyu_A AHPF, alkyl hydroperoxi 98.7 6.8E-08 2.3E-12 94.5 10.1 93 53-248 355-454 (521)
231 4fk1_A Putative thioredoxin re 98.7 1.2E-08 4.1E-13 92.8 4.3 54 194-249 185-238 (304)
232 2a87_A TRXR, TR, thioredoxin r 98.7 1.8E-08 6.3E-13 92.9 5.6 34 53-86 155-188 (335)
233 2gag_A Heterotetrameric sarcos 98.7 3.9E-08 1.3E-12 102.9 8.6 71 3-86 244-317 (965)
234 3fbs_A Oxidoreductase; structu 98.6 1.4E-08 4.7E-13 91.9 4.4 47 194-247 179-226 (297)
235 3pl8_A Pyranose 2-oxidase; sub 98.6 4.7E-07 1.6E-11 90.2 15.7 38 52-89 45-82 (623)
236 3uox_A Otemo; baeyer-villiger 98.6 1.7E-07 5.7E-12 92.0 12.3 34 53-86 185-218 (545)
237 3cgb_A Pyridine nucleotide-dis 98.6 4E-08 1.4E-12 95.3 7.8 34 53-86 36-71 (480)
238 3ics_A Coenzyme A-disulfide re 98.6 8.6E-08 2.9E-12 95.4 10.3 35 52-86 35-71 (588)
239 1mo9_A ORF3; nucleotide bindin 98.6 3.5E-07 1.2E-11 89.6 13.9 39 51-89 41-80 (523)
240 4gcm_A TRXR, thioredoxin reduc 98.6 4.2E-08 1.4E-12 89.5 6.9 70 3-86 107-178 (312)
241 2xve_A Flavin-containing monoo 98.6 3.5E-08 1.2E-12 95.1 6.3 67 3-86 157-230 (464)
242 1ju2_A HydroxynitrIle lyase; f 98.6 3.2E-07 1.1E-11 89.9 13.1 34 52-86 25-58 (536)
243 1nhp_A NADH peroxidase; oxidor 98.6 1.1E-07 3.6E-12 91.4 9.2 33 54-86 1-35 (447)
244 1y56_A Hypothetical protein PH 98.6 1E-07 3.6E-12 92.5 9.2 33 53-86 108-140 (493)
245 2bc0_A NADH oxidase; flavoprot 98.6 6.4E-08 2.2E-12 94.1 7.5 34 53-86 35-71 (490)
246 2cdu_A NADPH oxidase; flavoenz 98.6 9.2E-08 3.1E-12 92.0 8.4 33 54-86 1-35 (452)
247 1ps9_A 2,4-dienoyl-COA reducta 98.6 2.2E-08 7.6E-13 101.1 4.0 63 2-81 457-522 (671)
248 4ap3_A Steroid monooxygenase; 98.6 2.4E-07 8.3E-12 90.9 11.3 34 53-86 191-224 (549)
249 3g5s_A Methylenetetrahydrofola 98.6 1.6E-07 5.4E-12 86.0 9.1 33 54-86 2-34 (443)
250 3ic9_A Dihydrolipoamide dehydr 98.6 4.4E-07 1.5E-11 88.1 13.0 37 53-89 8-44 (492)
251 3t37_A Probable dehydrogenase; 98.6 1.2E-07 4.2E-12 93.0 9.1 54 197-251 218-276 (526)
252 1lqt_A FPRA; NADP+ derivative, 98.6 2.4E-07 8.2E-12 88.9 10.9 34 53-86 147-201 (456)
253 3ntd_A FAD-dependent pyridine 98.6 1.3E-07 4.3E-12 93.8 9.1 33 54-86 2-36 (565)
254 1o94_A Tmadh, trimethylamine d 98.6 3.3E-08 1.1E-12 100.6 4.9 34 53-86 528-563 (729)
255 4b1b_A TRXR, thioredoxin reduc 98.6 1.6E-07 5.5E-12 91.7 9.1 34 53-86 42-75 (542)
256 4g6h_A Rotenone-insensitive NA 98.5 3.2E-08 1.1E-12 96.1 4.1 35 52-86 41-75 (502)
257 2vdc_G Glutamate synthase [NAD 98.5 4.8E-08 1.7E-12 93.6 5.2 35 52-86 121-155 (456)
258 2v3a_A Rubredoxin reductase; a 98.5 6.8E-08 2.3E-12 90.8 6.1 35 52-86 3-39 (384)
259 3q9t_A Choline dehydrogenase a 98.5 7.2E-07 2.5E-11 87.7 13.0 37 51-87 4-41 (577)
260 3vrd_B FCCB subunit, flavocyto 98.5 6.1E-08 2.1E-12 91.8 5.1 44 201-248 66-109 (401)
261 2x8g_A Thioredoxin glutathione 98.5 5.1E-07 1.7E-11 90.0 11.7 35 51-85 105-139 (598)
262 1m6i_A Programmed cell death p 98.5 1.1E-07 3.6E-12 92.5 5.9 36 51-86 9-46 (493)
263 3fim_B ARYL-alcohol oxidase; A 98.5 1.1E-07 3.7E-12 93.3 5.7 34 53-86 2-36 (566)
264 2gag_A Heterotetrameric sarcos 98.4 1.3E-06 4.3E-11 91.6 13.3 34 53-86 128-161 (965)
265 2gv8_A Monooxygenase; FMO, FAD 98.4 2.6E-07 8.9E-12 88.7 7.2 34 53-86 212-246 (447)
266 3k30_A Histamine dehydrogenase 98.4 9.5E-08 3.2E-12 96.8 4.1 36 51-86 389-424 (690)
267 2vdc_G Glutamate synthase [NAD 98.4 1.9E-07 6.6E-12 89.4 5.8 35 52-86 263-298 (456)
268 4eqs_A Coenzyme A disulfide re 98.4 9E-07 3.1E-11 84.5 9.6 32 55-86 2-35 (437)
269 1n4w_A CHOD, cholesterol oxida 98.4 3.4E-06 1.2E-10 82.1 13.7 35 52-86 4-38 (504)
270 1gte_A Dihydropyrimidine dehyd 98.4 6.7E-07 2.3E-11 94.3 9.3 33 54-86 333-366 (1025)
271 4b63_A L-ornithine N5 monooxyg 98.4 7E-06 2.4E-10 79.7 15.3 58 187-245 143-212 (501)
272 1gpe_A Protein (glucose oxidas 98.3 7.2E-07 2.5E-11 88.3 7.0 35 52-86 23-58 (587)
273 1gte_A Dihydropyrimidine dehyd 98.3 2.6E-07 8.8E-12 97.5 3.4 34 53-86 187-221 (1025)
274 1ps9_A 2,4-dienoyl-COA reducta 98.3 9.1E-07 3.1E-11 89.3 6.6 35 52-86 372-406 (671)
275 1lqt_A FPRA; NADP+ derivative, 98.2 2.7E-07 9.2E-12 88.5 2.0 34 53-86 3-43 (456)
276 3fpz_A Thiazole biosynthetic e 98.2 8.1E-07 2.8E-11 81.4 4.8 38 52-89 64-104 (326)
277 4a9w_A Monooxygenase; baeyer-v 98.2 2.5E-06 8.4E-11 79.0 8.0 33 53-86 163-195 (357)
278 1cjc_A Protein (adrenodoxin re 98.2 3.4E-07 1.2E-11 87.9 2.0 35 52-86 5-41 (460)
279 3h8l_A NADH oxidase; membrane 98.2 1.2E-06 4.2E-11 82.9 5.6 51 194-251 223-274 (409)
280 2jae_A L-amino acid oxidase; o 98.1 2.8E-06 9.6E-11 82.5 6.9 39 51-89 9-48 (489)
281 2e1m_A L-glutamate oxidase; L- 98.1 2.8E-06 9.7E-11 78.7 6.0 39 51-89 42-82 (376)
282 1v0j_A UDP-galactopyranose mut 98.1 2.5E-06 8.7E-11 80.4 5.8 40 52-91 6-47 (399)
283 2b9w_A Putative aminooxidase; 98.1 3.2E-06 1.1E-10 80.5 6.4 38 52-89 5-44 (424)
284 3hdq_A UDP-galactopyranose mut 98.1 3E-06 1E-10 79.2 6.0 41 51-91 27-68 (397)
285 1rsg_A FMS1 protein; FAD bindi 98.1 2.3E-06 7.9E-11 83.7 4.6 38 53-90 8-47 (516)
286 1w4x_A Phenylacetone monooxyge 98.0 0.00011 3.7E-09 72.2 15.0 34 53-86 186-219 (542)
287 4b63_A L-ornithine N5 monooxyg 98.0 2.7E-05 9.3E-10 75.6 10.0 34 53-86 246-281 (501)
288 2yg5_A Putrescine oxidase; oxi 98.0 5.6E-06 1.9E-10 79.5 5.1 38 53-90 5-43 (453)
289 1sez_A Protoporphyrinogen oxid 98.0 6.1E-06 2.1E-10 80.5 5.4 38 52-89 12-50 (504)
290 1i8t_A UDP-galactopyranose mut 97.9 5.8E-06 2E-10 77.0 4.8 37 54-90 2-39 (367)
291 3sx6_A Sulfide-quinone reducta 97.9 7.5E-06 2.6E-10 78.2 5.1 51 194-249 213-271 (437)
292 4dsg_A UDP-galactopyranose mut 97.9 1.4E-05 4.6E-10 77.4 6.6 41 52-92 8-50 (484)
293 2iid_A L-amino-acid oxidase; f 97.9 1E-05 3.5E-10 78.7 5.2 38 52-89 32-70 (498)
294 2bi7_A UDP-galactopyranose mut 97.8 1.4E-05 4.9E-10 74.7 5.7 37 53-89 3-40 (384)
295 1y56_A Hypothetical protein PH 97.6 4.4E-05 1.5E-09 74.0 5.7 53 201-255 268-323 (493)
296 1kdg_A CDH, cellobiose dehydro 97.6 3.7E-05 1.3E-09 75.6 5.2 58 193-251 199-266 (546)
297 1b37_A Protein (polyamine oxid 97.6 4.6E-05 1.6E-09 73.5 5.7 56 189-247 206-270 (472)
298 1o94_A Tmadh, trimethylamine d 97.6 8.6E-05 2.9E-09 75.5 6.9 37 51-87 387-423 (729)
299 3h28_A Sulfide-quinone reducta 97.6 2.3E-05 7.7E-10 74.7 2.5 51 194-251 205-260 (430)
300 2z3y_A Lysine-specific histone 97.5 8E-05 2.7E-09 74.9 5.8 39 51-89 105-144 (662)
301 2xag_A Lysine-specific histone 97.5 8.8E-05 3E-09 76.1 5.9 38 52-89 277-315 (852)
302 1vg0_A RAB proteins geranylger 97.3 0.00027 9.3E-09 69.6 6.5 55 189-244 378-434 (650)
303 1coy_A Cholesterol oxidase; ox 97.3 0.00024 8.1E-09 69.0 5.6 36 51-86 9-44 (507)
304 3vrd_B FCCB subunit, flavocyto 97.2 3.3E-05 1.1E-09 72.9 -1.1 49 201-251 213-262 (401)
305 3hyw_A Sulfide-quinone reducta 97.2 1.9E-05 6.6E-10 75.2 -3.1 53 194-251 205-260 (430)
306 3ayj_A Pro-enzyme of L-phenyla 97.2 0.00016 5.5E-09 72.2 3.2 34 53-86 56-97 (721)
307 3fwz_A Inner membrane protein 96.7 0.0027 9.2E-08 49.8 6.2 36 51-86 5-40 (140)
308 2g1u_A Hypothetical protein TM 96.5 0.0035 1.2E-07 50.1 5.3 35 52-86 18-52 (155)
309 3llv_A Exopolyphosphatase-rela 96.4 0.0042 1.4E-07 48.6 5.3 34 53-86 6-39 (141)
310 1lss_A TRK system potassium up 96.3 0.0043 1.5E-07 48.4 5.0 33 54-86 5-37 (140)
311 1id1_A Putative potassium chan 96.2 0.0064 2.2E-07 48.4 5.6 34 53-86 3-36 (153)
312 3ic5_A Putative saccharopine d 96.1 0.0061 2.1E-07 45.8 4.7 34 53-86 5-39 (118)
313 3ado_A Lambda-crystallin; L-gu 95.7 0.01 3.4E-07 53.3 5.0 34 53-86 6-39 (319)
314 2hmt_A YUAA protein; RCK, KTN, 95.7 0.011 3.8E-07 46.1 4.7 33 54-86 7-39 (144)
315 3l4b_C TRKA K+ channel protien 95.6 0.016 5.6E-07 49.1 5.6 32 55-86 2-33 (218)
316 3c85_A Putative glutathione-re 95.5 0.014 4.8E-07 48.0 4.8 34 53-86 39-73 (183)
317 1f0y_A HCDH, L-3-hydroxyacyl-C 95.4 0.018 6.2E-07 51.6 5.6 33 54-86 16-48 (302)
318 4e12_A Diketoreductase; oxidor 95.4 0.018 6.3E-07 51.0 5.5 33 54-86 5-37 (283)
319 3i83_A 2-dehydropantoate 2-red 95.3 0.018 6.3E-07 52.0 5.2 33 54-86 3-35 (320)
320 3dfz_A SIRC, precorrin-2 dehyd 95.2 0.019 6.5E-07 48.6 4.8 34 53-86 31-64 (223)
321 4g65_A TRK system potassium up 95.1 0.014 4.8E-07 55.6 4.0 34 53-86 3-36 (461)
322 3hn2_A 2-dehydropantoate 2-red 95.0 0.02 6.7E-07 51.6 4.6 33 54-86 3-35 (312)
323 3k6j_A Protein F01G10.3, confi 95.0 0.035 1.2E-06 52.5 6.3 34 53-86 54-87 (460)
324 1pzg_A LDH, lactate dehydrogen 94.9 0.03 1E-06 50.8 5.5 34 53-86 9-43 (331)
325 1kyq_A Met8P, siroheme biosynt 94.8 0.017 5.7E-07 50.6 3.4 34 53-86 13-46 (274)
326 2dpo_A L-gulonate 3-dehydrogen 94.8 0.029 9.9E-07 50.5 5.1 34 53-86 6-39 (319)
327 2ewd_A Lactate dehydrogenase,; 94.8 0.029 1E-06 50.6 5.1 34 53-86 4-38 (317)
328 2raf_A Putative dinucleotide-b 94.7 0.037 1.3E-06 46.5 5.2 34 53-86 19-52 (209)
329 1zej_A HBD-9, 3-hydroxyacyl-CO 94.6 0.037 1.2E-06 49.1 5.0 34 52-86 11-44 (293)
330 3g17_A Similar to 2-dehydropan 94.5 0.027 9.4E-07 50.2 4.1 33 54-86 3-35 (294)
331 1jw9_B Molybdopterin biosynthe 94.5 0.032 1.1E-06 48.3 4.5 34 53-86 31-65 (249)
332 2y0c_A BCEC, UDP-glucose dehyd 94.5 0.038 1.3E-06 52.9 5.3 35 52-86 7-41 (478)
333 1ks9_A KPA reductase;, 2-dehyd 94.4 0.042 1.5E-06 48.7 5.2 32 55-86 2-33 (291)
334 3ghy_A Ketopantoate reductase 94.3 0.046 1.6E-06 49.7 5.3 32 54-85 4-35 (335)
335 3oj0_A Glutr, glutamyl-tRNA re 94.3 0.027 9.2E-07 44.1 3.3 34 53-86 21-54 (144)
336 1lld_A L-lactate dehydrogenase 94.3 0.045 1.5E-06 49.4 5.1 34 53-86 7-42 (319)
337 2ew2_A 2-dehydropantoate 2-red 94.3 0.045 1.5E-06 49.2 5.1 33 54-86 4-36 (316)
338 3k96_A Glycerol-3-phosphate de 94.3 0.051 1.7E-06 49.8 5.4 34 53-86 29-62 (356)
339 3gg2_A Sugar dehydrogenase, UD 94.3 0.045 1.5E-06 51.9 5.2 33 54-86 3-35 (450)
340 1vg0_A RAB proteins geranylger 94.2 0.096 3.3E-06 51.7 7.6 39 51-89 6-45 (650)
341 3doj_A AT3G25530, dehydrogenas 94.2 0.054 1.8E-06 48.7 5.4 35 52-86 20-54 (310)
342 1bg6_A N-(1-D-carboxylethyl)-L 94.1 0.052 1.8E-06 49.8 5.2 33 54-86 5-37 (359)
343 1t2d_A LDH-P, L-lactate dehydr 94.1 0.062 2.1E-06 48.4 5.5 34 53-86 4-38 (322)
344 3vtf_A UDP-glucose 6-dehydroge 94.0 0.066 2.3E-06 50.2 5.8 35 52-86 20-54 (444)
345 4dio_A NAD(P) transhydrogenase 94.0 0.061 2.1E-06 49.7 5.4 34 53-86 190-223 (405)
346 3ego_A Probable 2-dehydropanto 94.0 0.054 1.9E-06 48.6 5.0 32 54-86 3-34 (307)
347 3lk7_A UDP-N-acetylmuramoylala 94.0 0.047 1.6E-06 51.9 4.8 34 53-86 9-42 (451)
348 1z82_A Glycerol-3-phosphate de 94.0 0.056 1.9E-06 49.2 5.1 36 51-86 12-47 (335)
349 4a7p_A UDP-glucose dehydrogena 93.9 0.062 2.1E-06 50.7 5.4 35 52-86 7-41 (446)
350 3qha_A Putative oxidoreductase 93.9 0.043 1.5E-06 49.0 4.1 34 53-86 15-48 (296)
351 2hjr_A Malate dehydrogenase; m 93.9 0.067 2.3E-06 48.4 5.4 34 53-86 14-48 (328)
352 3l9w_A Glutathione-regulated p 93.9 0.062 2.1E-06 50.3 5.3 34 53-86 4-37 (413)
353 3e8x_A Putative NAD-dependent 93.9 0.061 2.1E-06 46.0 4.9 34 53-86 21-55 (236)
354 2x5o_A UDP-N-acetylmuramoylala 93.9 0.041 1.4E-06 52.1 4.1 34 53-86 5-38 (439)
355 3g79_A NDP-N-acetyl-D-galactos 93.8 0.06 2.1E-06 51.2 5.0 34 53-86 18-53 (478)
356 3hwr_A 2-dehydropantoate 2-red 93.7 0.09 3.1E-06 47.4 6.0 33 53-86 19-51 (318)
357 1coy_A Cholesterol oxidase; ox 93.7 0.083 2.8E-06 51.1 6.0 58 194-251 231-298 (507)
358 3p2y_A Alanine dehydrogenase/p 93.7 0.058 2E-06 49.5 4.5 34 53-86 184-217 (381)
359 1zcj_A Peroxisomal bifunctiona 93.7 0.089 3E-06 50.1 6.0 34 53-86 37-70 (463)
360 3dtt_A NADP oxidoreductase; st 93.6 0.078 2.7E-06 45.8 5.2 35 52-86 18-52 (245)
361 1b37_A Protein (polyamine oxid 93.6 0.082 2.8E-06 50.6 5.7 38 52-89 3-42 (472)
362 3g0o_A 3-hydroxyisobutyrate de 93.5 0.079 2.7E-06 47.4 5.2 34 53-86 7-40 (303)
363 2v6b_A L-LDH, L-lactate dehydr 93.5 0.076 2.6E-06 47.5 5.0 32 55-86 2-35 (304)
364 3pef_A 6-phosphogluconate dehy 93.5 0.075 2.6E-06 47.1 4.9 33 54-86 2-34 (287)
365 2vns_A Metalloreductase steap3 93.5 0.088 3E-06 44.4 5.1 34 53-86 28-61 (215)
366 1nyt_A Shikimate 5-dehydrogena 93.4 0.12 4.1E-06 45.3 6.1 34 53-86 119-152 (271)
367 3eag_A UDP-N-acetylmuramate:L- 93.4 0.081 2.8E-06 47.9 5.0 34 53-86 4-38 (326)
368 4ffl_A PYLC; amino acid, biosy 93.3 0.089 3.1E-06 48.4 5.3 33 54-86 2-34 (363)
369 3mog_A Probable 3-hydroxybutyr 93.3 0.085 2.9E-06 50.4 5.2 33 54-86 6-38 (483)
370 3pid_A UDP-glucose 6-dehydroge 93.3 0.082 2.8E-06 49.5 4.9 33 53-86 36-68 (432)
371 3gpi_A NAD-dependent epimerase 93.1 0.11 3.9E-06 45.8 5.5 33 54-86 4-36 (286)
372 3tl2_A Malate dehydrogenase; c 93.1 0.11 3.6E-06 46.7 5.3 33 53-85 8-41 (315)
373 1mv8_A GMD, GDP-mannose 6-dehy 93.1 0.076 2.6E-06 50.2 4.5 32 55-86 2-33 (436)
374 3l6d_A Putative oxidoreductase 93.1 0.13 4.3E-06 46.1 5.8 34 53-86 9-42 (306)
375 2a9f_A Putative malic enzyme ( 93.0 0.09 3.1E-06 48.1 4.7 36 51-86 186-222 (398)
376 3ius_A Uncharacterized conserv 93.0 0.078 2.7E-06 46.8 4.3 34 53-86 5-38 (286)
377 4e21_A 6-phosphogluconate dehy 93.0 0.11 3.7E-06 47.6 5.2 34 53-86 22-55 (358)
378 3h8v_A Ubiquitin-like modifier 93.0 0.082 2.8E-06 46.7 4.2 34 53-86 36-70 (292)
379 4dll_A 2-hydroxy-3-oxopropiona 92.9 0.1 3.5E-06 47.1 4.9 34 53-86 31-64 (320)
380 3phh_A Shikimate dehydrogenase 92.9 0.12 4.3E-06 45.0 5.3 34 53-86 118-151 (269)
381 3ktd_A Prephenate dehydrogenas 92.9 0.13 4.6E-06 46.6 5.7 34 53-86 8-41 (341)
382 3dhn_A NAD-dependent epimerase 92.9 0.089 3E-06 44.6 4.3 34 53-86 4-38 (227)
383 3rui_A Ubiquitin-like modifier 92.9 0.12 4.1E-06 46.6 5.2 34 53-86 34-68 (340)
384 1ur5_A Malate dehydrogenase; o 92.8 0.12 4.1E-06 46.3 5.2 33 54-86 3-36 (309)
385 3gt0_A Pyrroline-5-carboxylate 92.8 0.23 7.7E-06 42.8 6.8 33 54-86 3-39 (247)
386 3pdu_A 3-hydroxyisobutyrate de 92.8 0.08 2.7E-06 46.9 4.0 32 55-86 3-34 (287)
387 2h78_A Hibadh, 3-hydroxyisobut 92.8 0.098 3.3E-06 46.7 4.6 33 54-86 4-36 (302)
388 1guz_A Malate dehydrogenase; o 92.7 0.12 4.1E-06 46.4 5.1 32 55-86 2-35 (310)
389 1jay_A Coenzyme F420H2:NADP+ o 92.7 0.12 4E-06 43.4 4.8 32 55-86 2-34 (212)
390 2egg_A AROE, shikimate 5-dehyd 92.7 0.18 6E-06 44.9 6.1 34 53-86 141-175 (297)
391 1txg_A Glycerol-3-phosphate de 92.7 0.09 3.1E-06 47.7 4.3 30 55-84 2-31 (335)
392 3ew7_A LMO0794 protein; Q8Y8U8 92.7 0.13 4.6E-06 43.1 5.1 32 55-86 2-34 (221)
393 4huj_A Uncharacterized protein 92.7 0.072 2.5E-06 45.1 3.4 34 53-86 23-57 (220)
394 1zud_1 Adenylyltransferase THI 92.7 0.11 3.8E-06 44.9 4.6 34 53-86 28-62 (251)
395 3cky_A 2-hydroxymethyl glutara 92.6 0.1 3.5E-06 46.5 4.6 34 53-86 4-37 (301)
396 1vl6_A Malate oxidoreductase; 92.6 0.11 3.8E-06 47.5 4.6 35 52-86 191-226 (388)
397 2pv7_A T-protein [includes: ch 92.6 0.13 4.4E-06 45.8 5.1 33 54-86 22-55 (298)
398 1x13_A NAD(P) transhydrogenase 92.5 0.13 4.4E-06 48.0 5.1 34 53-86 172-205 (401)
399 3ggo_A Prephenate dehydrogenas 92.5 0.15 5E-06 45.8 5.3 34 53-86 33-68 (314)
400 2uyy_A N-PAC protein; long-cha 92.5 0.16 5.4E-06 45.7 5.6 33 54-86 31-63 (316)
401 2q3e_A UDP-glucose 6-dehydroge 92.4 0.1 3.5E-06 49.8 4.5 33 54-86 6-40 (467)
402 1y6j_A L-lactate dehydrogenase 92.4 0.15 5.1E-06 45.9 5.3 34 53-86 7-42 (318)
403 3dfu_A Uncharacterized protein 92.4 0.045 1.5E-06 46.5 1.7 32 54-85 7-38 (232)
404 3gvi_A Malate dehydrogenase; N 92.4 0.16 5.4E-06 45.8 5.4 34 53-86 7-41 (324)
405 2p4q_A 6-phosphogluconate dehy 92.4 0.15 5.1E-06 49.0 5.5 36 51-86 8-43 (497)
406 3h2s_A Putative NADH-flavin re 92.4 0.15 5.1E-06 43.0 5.0 32 55-86 2-34 (224)
407 1pjc_A Protein (L-alanine dehy 92.4 0.15 5.1E-06 46.8 5.3 33 54-86 168-200 (361)
408 3pqe_A L-LDH, L-lactate dehydr 92.3 0.14 4.9E-06 46.1 5.0 34 53-86 5-40 (326)
409 4ezb_A Uncharacterized conserv 92.3 0.13 4.3E-06 46.4 4.7 34 53-86 24-58 (317)
410 1l7d_A Nicotinamide nucleotide 92.3 0.16 5.5E-06 47.1 5.4 34 53-86 172-205 (384)
411 2eez_A Alanine dehydrogenase; 92.2 0.16 5.3E-06 46.9 5.3 34 53-86 166-199 (369)
412 1kdg_A CDH, cellobiose dehydro 92.2 0.14 4.7E-06 50.1 5.2 36 51-86 5-40 (546)
413 1pjq_A CYSG, siroheme synthase 92.2 0.13 4.4E-06 48.9 4.7 34 53-86 12-45 (457)
414 4b4o_A Epimerase family protei 92.2 0.16 5.4E-06 45.1 5.1 32 55-86 2-34 (298)
415 2aef_A Calcium-gated potassium 92.1 0.057 1.9E-06 46.2 2.1 33 53-86 9-41 (234)
416 2i6t_A Ubiquitin-conjugating e 92.1 0.14 4.6E-06 45.7 4.6 34 53-86 14-49 (303)
417 2f1k_A Prephenate dehydrogenas 92.1 0.16 5.5E-06 44.7 5.1 32 55-86 2-33 (279)
418 3tri_A Pyrroline-5-carboxylate 92.1 0.35 1.2E-05 42.5 7.2 33 54-86 4-39 (280)
419 1a5z_A L-lactate dehydrogenase 92.1 0.13 4.3E-06 46.4 4.4 32 55-86 2-35 (319)
420 2qyt_A 2-dehydropantoate 2-red 92.1 0.099 3.4E-06 47.0 3.7 31 54-84 9-45 (317)
421 1dlj_A UDP-glucose dehydrogena 92.1 0.11 3.8E-06 48.5 4.2 31 55-86 2-32 (402)
422 3jyo_A Quinate/shikimate dehyd 92.0 0.26 9E-06 43.4 6.3 34 53-86 127-161 (283)
423 3pwz_A Shikimate dehydrogenase 92.0 0.29 9.9E-06 42.8 6.5 34 53-86 120-154 (272)
424 3fi9_A Malate dehydrogenase; s 92.0 0.24 8.3E-06 44.9 6.1 34 53-86 8-44 (343)
425 1evy_A Glycerol-3-phosphate de 92.0 0.086 2.9E-06 48.6 3.2 32 55-86 17-48 (366)
426 1p77_A Shikimate 5-dehydrogena 91.9 0.13 4.4E-06 45.1 4.2 34 53-86 119-152 (272)
427 3p7m_A Malate dehydrogenase; p 91.8 0.22 7.4E-06 44.8 5.5 34 53-86 5-39 (321)
428 1hdo_A Biliverdin IX beta redu 91.7 0.19 6.4E-06 41.6 4.9 33 54-86 4-37 (206)
429 2wtb_A MFP2, fatty acid multif 91.7 0.15 5.2E-06 51.4 4.9 33 54-86 313-345 (725)
430 4id9_A Short-chain dehydrogena 91.7 0.19 6.5E-06 45.7 5.2 35 52-86 18-53 (347)
431 4gwg_A 6-phosphogluconate dehy 91.6 0.21 7.1E-06 47.6 5.5 34 53-86 4-37 (484)
432 2izz_A Pyrroline-5-carboxylate 91.6 0.2 7E-06 45.1 5.2 34 53-86 22-59 (322)
433 2vhw_A Alanine dehydrogenase; 91.6 0.2 7E-06 46.2 5.3 34 53-86 168-201 (377)
434 2zyd_A 6-phosphogluconate dehy 91.6 0.18 6.1E-06 48.2 5.0 34 53-86 15-48 (480)
435 1yqg_A Pyrroline-5-carboxylate 91.6 0.16 5.6E-06 44.2 4.5 32 55-86 2-34 (263)
436 3ojo_A CAP5O; rossmann fold, c 91.6 0.16 5.4E-06 47.7 4.5 34 53-86 11-44 (431)
437 1hyh_A L-hicdh, L-2-hydroxyiso 91.5 0.16 5.4E-06 45.6 4.4 32 55-86 3-36 (309)
438 2o3j_A UDP-glucose 6-dehydroge 91.4 0.15 5.3E-06 48.7 4.4 33 54-86 10-44 (481)
439 3qsg_A NAD-binding phosphogluc 91.4 0.16 5.5E-06 45.6 4.3 33 53-85 24-57 (312)
440 2gf2_A Hibadh, 3-hydroxyisobut 91.4 0.19 6.5E-06 44.6 4.8 32 55-86 2-33 (296)
441 3o8q_A Shikimate 5-dehydrogena 91.4 0.3 1E-05 43.0 5.8 34 53-86 126-160 (281)
442 3tnl_A Shikimate dehydrogenase 91.3 0.24 8E-06 44.4 5.2 34 53-86 154-188 (315)
443 1yj8_A Glycerol-3-phosphate de 91.3 0.15 5.1E-06 47.1 4.1 33 54-86 22-61 (375)
444 2g5c_A Prephenate dehydrogenas 91.3 0.22 7.6E-06 43.8 5.1 32 55-86 3-36 (281)
445 2rcy_A Pyrroline carboxylate r 91.3 0.23 7.7E-06 43.2 5.1 33 54-86 5-41 (262)
446 1vpd_A Tartronate semialdehyde 91.3 0.18 6.3E-06 44.8 4.5 33 54-86 6-38 (299)
447 1edz_A 5,10-methylenetetrahydr 91.3 0.19 6.4E-06 44.9 4.5 35 52-86 176-211 (320)
448 3ldh_A Lactate dehydrogenase; 91.2 0.22 7.5E-06 44.8 4.9 34 53-86 21-56 (330)
449 3h5n_A MCCB protein; ubiquitin 91.2 0.19 6.4E-06 45.9 4.6 34 53-86 118-152 (353)
450 3don_A Shikimate dehydrogenase 91.2 0.19 6.4E-06 44.1 4.4 34 53-86 117-151 (277)
451 1oju_A MDH, malate dehydrogena 91.2 0.19 6.4E-06 44.6 4.4 32 55-86 2-35 (294)
452 3c24_A Putative oxidoreductase 91.2 0.21 7.3E-06 44.1 4.8 33 54-86 12-45 (286)
453 3q2o_A Phosphoribosylaminoimid 91.1 0.33 1.1E-05 45.0 6.3 35 52-86 13-47 (389)
454 2pgd_A 6-phosphogluconate dehy 91.1 0.23 8E-06 47.5 5.4 33 54-86 3-35 (482)
455 3ond_A Adenosylhomocysteinase; 91.1 0.24 8.4E-06 46.8 5.3 34 53-86 265-298 (488)
456 1ldn_A L-lactate dehydrogenase 91.1 0.24 8E-06 44.5 5.1 34 53-86 6-41 (316)
457 1y8q_A Ubiquitin-like 1 activa 91.1 0.2 6.7E-06 45.6 4.6 34 53-86 36-70 (346)
458 3vps_A TUNA, NAD-dependent epi 91.1 0.25 8.5E-06 44.2 5.3 34 53-86 7-41 (321)
459 1np3_A Ketol-acid reductoisome 91.1 0.27 9.1E-06 44.7 5.4 33 54-86 17-49 (338)
460 2ahr_A Putative pyrroline carb 91.0 0.29 9.9E-06 42.4 5.5 33 54-86 4-36 (259)
461 4gsl_A Ubiquitin-like modifier 91.0 0.23 8E-06 48.2 5.2 34 53-86 326-360 (615)
462 3r6d_A NAD-dependent epimerase 90.9 0.34 1.2E-05 40.7 5.8 33 54-86 6-40 (221)
463 2d5c_A AROE, shikimate 5-dehyd 90.9 0.43 1.5E-05 41.5 6.5 32 55-86 118-149 (263)
464 3orq_A N5-carboxyaminoimidazol 90.9 0.41 1.4E-05 44.2 6.7 35 52-86 11-45 (377)
465 3vku_A L-LDH, L-lactate dehydr 90.9 0.24 8.3E-06 44.5 4.9 35 52-86 8-44 (326)
466 1wdk_A Fatty oxidation complex 90.9 0.19 6.4E-06 50.7 4.6 34 53-86 314-347 (715)
467 3fbt_A Chorismate mutase and s 90.9 0.25 8.4E-06 43.5 4.8 34 53-86 122-156 (282)
468 3u62_A Shikimate dehydrogenase 90.8 0.31 1.1E-05 42.1 5.4 32 55-86 110-142 (253)
469 2hk9_A Shikimate dehydrogenase 90.8 0.22 7.5E-06 43.8 4.5 34 53-86 129-162 (275)
470 4aj2_A L-lactate dehydrogenase 90.7 0.32 1.1E-05 43.8 5.5 35 52-86 18-54 (331)
471 1x0v_A GPD-C, GPDH-C, glycerol 90.7 0.14 4.8E-06 46.8 3.3 33 54-86 9-48 (354)
472 1nvt_A Shikimate 5'-dehydrogen 90.7 0.21 7.1E-06 44.2 4.3 33 53-86 128-160 (287)
473 3c7a_A Octopine dehydrogenase; 90.7 0.15 5.1E-06 47.6 3.5 30 54-83 3-33 (404)
474 3vh1_A Ubiquitin-like modifier 90.6 0.24 8.4E-06 48.0 4.9 34 53-86 327-361 (598)
475 2cvz_A Dehydrogenase, 3-hydrox 90.6 0.22 7.4E-06 44.0 4.4 31 55-86 3-33 (289)
476 3nep_X Malate dehydrogenase; h 90.6 0.24 8.1E-06 44.3 4.6 32 55-86 2-35 (314)
477 2rir_A Dipicolinate synthase, 90.6 0.3 1E-05 43.5 5.3 35 52-86 156-190 (300)
478 2yg5_A Putrescine oxidase; oxi 90.6 0.32 1.1E-05 46.1 5.7 52 190-247 216-268 (453)
479 3zwc_A Peroxisomal bifunctiona 90.6 0.34 1.2E-05 48.8 6.1 34 53-86 316-349 (742)
480 1npy_A Hypothetical shikimate 90.5 0.44 1.5E-05 41.6 6.1 34 53-86 119-153 (271)
481 1y7t_A Malate dehydrogenase; N 90.5 0.21 7.1E-06 45.2 4.1 33 53-85 4-44 (327)
482 3d4o_A Dipicolinate synthase s 90.5 0.31 1.1E-05 43.2 5.2 34 53-86 155-188 (293)
483 3o38_A Short chain dehydrogena 90.5 0.57 1.9E-05 40.7 6.9 34 53-86 22-57 (266)
484 2b69_A UDP-glucuronate decarbo 90.5 0.3 1E-05 44.3 5.2 34 53-86 27-61 (343)
485 1pgj_A 6PGDH, 6-PGDH, 6-phosph 90.4 0.27 9.2E-06 47.0 5.1 32 55-86 3-34 (478)
486 1tt5_B Ubiquitin-activating en 90.4 0.29 9.8E-06 45.9 5.1 34 53-86 40-74 (434)
487 1leh_A Leucine dehydrogenase; 90.4 0.32 1.1E-05 44.4 5.3 34 53-86 173-206 (364)
488 4gx0_A TRKA domain protein; me 90.3 0.27 9.4E-06 48.1 5.2 33 54-86 349-381 (565)
489 1lu9_A Methylene tetrahydromet 90.2 0.34 1.2E-05 42.8 5.3 34 53-86 119-153 (287)
490 3t4e_A Quinate/shikimate dehyd 90.1 0.35 1.2E-05 43.1 5.2 34 53-86 148-182 (312)
491 1a4i_A Methylenetetrahydrofola 90.1 0.31 1.1E-05 42.9 4.7 35 52-86 164-199 (301)
492 1qyc_A Phenylcoumaran benzylic 90.1 0.33 1.1E-05 43.2 5.1 33 54-86 5-38 (308)
493 2dkn_A 3-alpha-hydroxysteroid 90.0 0.35 1.2E-05 41.5 5.1 32 55-86 3-35 (255)
494 1n7h_A GDP-D-mannose-4,6-dehyd 90.0 0.32 1.1E-05 44.9 5.1 33 54-86 29-62 (381)
495 3enk_A UDP-glucose 4-epimerase 90.0 0.4 1.4E-05 43.3 5.7 34 53-86 5-39 (341)
496 2ydy_A Methionine adenosyltran 89.9 0.3 1E-05 43.6 4.7 33 54-86 3-36 (315)
497 3d1l_A Putative NADP oxidoredu 89.9 0.29 9.9E-06 42.6 4.5 33 54-86 11-44 (266)
498 1ez4_A Lactate dehydrogenase; 89.9 0.3 1E-05 43.8 4.6 35 52-86 4-40 (318)
499 1i36_A Conserved hypothetical 89.8 0.27 9.3E-06 42.7 4.2 30 55-84 2-31 (264)
500 3ko8_A NAD-dependent epimerase 89.6 0.38 1.3E-05 42.9 5.1 32 55-86 2-34 (312)
No 1
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.4e-42 Score=329.58 Aligned_cols=351 Identities=20% Similarity=0.296 Sum_probs=265.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPD 131 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 131 (429)
.++||+|||||++|+++|++|+++|++|+|||+..++.++|..++|+++..+... ....+..++.+.|+++.++.+.
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~~~~gas~~~~g~~~~~~~~~-~~~~l~~~~~~~~~~l~~~~~~-- 80 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRFIGSGSTFRCGTGIRQQFNDE-ANVRVMKRSVELWKKYSEEYGF-- 80 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSHHHHCCCCCCCCCSSH-HHHHHHHHHHHHHHHHHHHHTC--
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCccccccCeeeecCCCh-HHHHHHHHHHHHHHHHHHHhCC--
Confidence 4689999999999999999999999999999999888899999999988765432 3356778888999998887754
Q ss_pred CcCeeeeeeeEEeecccccC-CCCC---ccccCCCCCCCCCCCCCC--------CCccC--ccccceeEehHHHHHHHHH
Q 014198 132 NYGYRALTTLSLTVTESQQS-GSKP---SNKANSLIPSWVDGPARS--------PTTIG--STQTTAQVHPQLFTKTLLN 197 (429)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~--------~~~~g--~~~~~~~~~~~~l~~~l~~ 197 (429)
.+...+.+.+........ ..+. ... .+..+++++..... ....+ +.+..+++++..+++.|.+
T Consensus 81 --~~~~~g~l~~~~~~~~~~~~~~~~~~~~~-~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 157 (382)
T 1y56_B 81 --SFKQTGYLFLLYDDEEVKTFKRNIEIQNK-FGVPTKLITPEEAKEIVPLLDISEVIAASWNPTDGKADPFEATTAFAV 157 (382)
T ss_dssp --CEECCCEEEEECSHHHHHHHHHHHHHHHH-TTCCCEEECHHHHHHSSTTCCCTTCCEEEEETTCCEECHHHHHHHHHH
T ss_pred --CeeccceEEEEeCHHHHHHHHHHHHHHHh-cCCCcEEeCHHHHHHhCCCCCcccceEEEEcCCCeeECHHHHHHHHHH
Confidence 466777777665543221 0000 000 12223333322110 11111 3567889999999999999
Q ss_pred HHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHH-hhhcc--cccccceeeEEEecCCC
Q 014198 198 KAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFE-LLASM--FRVSGLKAHSIILEPKE 273 (429)
Q Consensus 198 ~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~-~~~~~--~~~~~~~~~~~~~~~~~ 273 (429)
.+ ++.|+++++++ |+++..+ ++++.+|++.+| +++||.||+|+|.|+..+. .++.. +|+.+.+++++.+++..
T Consensus 158 ~~-~~~Gv~i~~~~~v~~i~~~-~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~~~~~~~~~g~~~~~~~~~ 234 (382)
T 1y56_B 158 KA-KEYGAKLLEYTEVKGFLIE-NNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAGIKTKIPIEPYKHQAVITQPIK 234 (382)
T ss_dssp HH-HHTTCEEECSCCEEEEEES-SSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHTCCSCCCCEEEEEEEEEECCCS
T ss_pred HH-HHCCCEEECCceEEEEEEE-CCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcCCCcCcCCCeeEeEEEEEccCC
Confidence 99 88899999999 9999987 677777887655 8999999999999998877 66666 89999999998887554
Q ss_pred CCCCCCceeEeeeccCCCCCCCCCCCceEecCCCcEEEecc-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHhccccCccc
Q 014198 274 ADAITPHALFLSYYPAQGEGGKPMDPEVYPRPTGEVYLCGM-SSEQEVPDDPETVSGDPASIQVLKRVARTVSSHLGEEA 352 (429)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~g~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~~ 352 (429)
+.....++.+. . ....|+.|..+| ++++++ +.+. ...+..++.+..+.+++.+.+++|.+.+ .
T Consensus 235 --~~~~~~~~~~~---~-----~~~~y~~p~~~g-~~iG~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~p~l~~-~ 298 (382)
T 1y56_B 235 --RGTINPMVISF---K-----YGHAYLTQTFHG-GIIGGIGYEIG----PTYDLTPTYEFLREVSYYFTKIIPALKN-L 298 (382)
T ss_dssp --TTSSCSEEEES---T-----TTTEEEECCSSS-CCEEECSCCBS----SCCCCCCCHHHHHHHHHHHHHHCGGGGG-S
T ss_pred --cccCCCeEEec---C-----CCeEEEEEeCCe-EEEecCCCCCC----CCCCCCCCHHHHHHHHHHHHHhCCCcCC-C
Confidence 33221233331 0 023567777777 544422 2221 1234557788899999999999999987 7
Q ss_pred ccceeeeeecccCCCCCceeccCCCCCcEEEEecCCCccchhhHHHHHHHHHHHhcCCCCcccCCCCCCCCcCCCC
Q 014198 353 QVKAEQACFLPCTDDGVPVIGELPGIKGCYVGTGHNCWGILNGPATGAALAELVMDGCASIVDLSRFSPARFGRPS 428 (429)
Q Consensus 353 ~~~~~~~g~r~~t~d~~p~ig~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~~g~~~~~~~~~~~~~R~~~~~ 428 (429)
++.+.|+|+||.++|+.|+||++|+.+|+|+++|++|+|++++|.+|+.++++|.+ +..+.+++.|+|+||..++
T Consensus 299 ~~~~~~~g~r~~t~d~~p~ig~~~~~~~~~~~~G~~g~G~~~a~~~g~~la~~i~~-~~~~~~~~~~~~~Rf~~~~ 373 (382)
T 1y56_B 299 LILRTWAGYYAKTPDSNPAIGRIEELNDYYIAAGFSGHGFMMAPAVGEMVAELITK-GKTKLPVEWYDPYRFERGE 373 (382)
T ss_dssp EEEEEEEEEEEECTTSCCEEEEESSSBTEEEEECCTTCHHHHHHHHHHHHHHHHHH-SSCSSCGGGGCGGGTTTTC
T ss_pred CceEEEEeccccCCCCCcEeccCCCCCCEEEEEecCcchHhhhHHHHHHHHHHHhC-CCCcCcccccCHhhhccCC
Confidence 88899999999999999999999988999999999999999999999999999954 4456789999999998754
No 2
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=100.00 E-value=3.4e-42 Score=326.97 Aligned_cols=350 Identities=15% Similarity=0.196 Sum_probs=256.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC-CccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS-VACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGP 130 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~-~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 130 (429)
.++||+|||||++|+++|++|+ +|++|+|||+.. ++.++|++++|+++..+.. .....+...+.++|+++.+++..
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~g~~as~~~~g~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~- 84 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQPGYHSTGRSAAHYTVAYGT-PQVRALTAASRAFFDNPPAGFCE- 84 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSSTTSSGGGSCCCEECSSSSC-HHHHHHHHHHHHHHHSCCTTSCS-
T ss_pred CcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCccccccccccceeecccCC-HHHHHHHHHHHHHHHHhhhhhCC-
Confidence 4689999999999999999999 699999999996 8889999999999886543 34566777777777766544322
Q ss_pred CCcCeeeeeeeEEeecccccCCCCCccc--cCCCCCCCCCCCCCC--------CCccC--ccccceeEehHHHHHHHHHH
Q 014198 131 DNYGYRALTTLSLTVTESQQSGSKPSNK--ANSLIPSWVDGPARS--------PTTIG--STQTTAQVHPQLFTKTLLNK 198 (429)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--------~~~~g--~~~~~~~~~~~~l~~~l~~~ 198 (429)
...+...|.+.+........+.+.... ..+...++++..... ....+ +.+..++++|..+++.|.+.
T Consensus 85 -~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 163 (381)
T 3nyc_A 85 -HPLLSPRPEMVVDFSDDPEELRRQYESGKALVPQMRLLDAEQACSIVPVLRRDKVFGATYDPTGADIDTDALHQGYLRG 163 (381)
T ss_dssp -SCSEEECCEEEECSSCCHHHHHHHHHHHHHHCTTCEEECHHHHHHHSTTBCGGGCCCEEEETTCEEECHHHHHHHHHHH
T ss_pred -cccccccceEEEechHHHHHHHHHHHHHHHcCCCcEEeCHHHHHHhCCCcccccceEEEEcCCCceECHHHHHHHHHHH
Confidence 224777788777665321111110000 022233444332211 11112 35678999999999999999
Q ss_pred HHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHH-hhhcc-cccccceeeEEEecCCCCC
Q 014198 199 AVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFE-LLASM-FRVSGLKAHSIILEPKEAD 275 (429)
Q Consensus 199 ~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 275 (429)
+ ++.|+++++++ |++|..+ ++. +.|++.+| +++||.||+|+|+|+..+. .++.. +++.+.+++++.++.+...
T Consensus 164 a-~~~Gv~i~~~~~V~~i~~~-~~~-~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~~~~~p~rg~~~~~~~~~~~ 239 (381)
T 3nyc_A 164 I-RRNQGQVLCNHEALEIRRV-DGA-WEVRCDAG-SYRAAVLVNAAGAWCDAIAGLAGVRPLGLQPKRRSAFIFAPPPGI 239 (381)
T ss_dssp H-HHTTCEEESSCCCCEEEEE-TTE-EEEECSSE-EEEESEEEECCGGGHHHHHHHHTCCCCCCEEEEEEEEEECCCTTC
T ss_pred H-HHCCCEEEcCCEEEEEEEe-CCe-EEEEeCCC-EEEcCEEEECCChhHHHHHHHhCCCCCceeeeEEEEEEECCCcCC
Confidence 9 88899999999 9999987 555 56777665 8999999999999999888 66665 6899999999988765411
Q ss_pred CCCCceeEeeeccCCCCCCCCCCCceEecCCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhccccCcccccc
Q 014198 276 AITPHALFLSYYPAQGEGGKPMDPEVYPRPTGEVYLCGMSSEQEVPDDPETVSGDPASIQVLKRVARTVSSHLGEEAQVK 355 (429)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~~~~~ 355 (429)
.....+.+... ....|+.|.. |.+++ |++.+.. ....+..+++..++.+++.+.. +|.+.. .++.
T Consensus 240 ~~~~~p~~~~~---------~~~~y~~p~~-g~~~i-g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~l~~-~~~~ 304 (381)
T 3nyc_A 240 DCHDWPMLVSL---------DESFYLKPDA-GMLLG-SPANADP--VEAHDVQPEQLDIATGMYLIEE-ATTLTI-RRPE 304 (381)
T ss_dssp CCTTCCEEEET---------TSSCEEEEET-TEEEE-ECCCCEE--CCSSCCCCCHHHHHHHHHHHHH-HBSCCC-CCCS
T ss_pred CcCccceEEeC---------CCCEEEEeCC-CcEEE-eCCcCCC--CCcccCCCChHHHHHHHHHHHh-cCCCcc-ccee
Confidence 11222233321 1135677776 66655 5454321 1223455667778888888876 577776 7788
Q ss_pred eeeeeecccCCCCCceeccCCCCCcEEEEecCCCccchhhHHHHHHHHHHHhcCCCCc-------ccCCCCCCCCcC
Q 014198 356 AEQACFLPCTDDGVPVIGELPGIKGCYVGTGHNCWGILNGPATGAALAELVMDGCASI-------VDLSRFSPARFG 425 (429)
Q Consensus 356 ~~~~g~r~~t~d~~p~ig~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~~g~~~~-------~~~~~~~~~R~~ 425 (429)
+.|+|+||+|+|+.|+||++|..+|+|+++|++|+|++++|++|++++++|. ++..+ .|++.|+|+||.
T Consensus 305 ~~w~G~r~~t~D~~p~ig~~~~~~~l~~a~G~~g~G~~~ap~~g~~la~~i~-g~~~~~~~~~~~~d~~~~~~~Rf~ 380 (381)
T 3nyc_A 305 HTWAGLRSFVADGDLVAGYAANAEGFFWVAAQGGYGIQTSAAMGEASAALIR-HQPLPAHLREHGLDEAMLSPRRLS 380 (381)
T ss_dssp EEEEEEEEECTTSCCEEEECTTSTTEEEEECCTTCTTTTHHHHHHHHHHHHT-TCCCCHHHHTTTCCHHHHCGGGGC
T ss_pred eeeEEccccCCCCCceecCCCCCCCeEEEEcCCChhHhhCHHHHHHHHHHHh-CCCCCcccccccCcccccCccccC
Confidence 9999999999999999999998999999999999999999999999999995 55545 679999999995
No 3
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=100.00 E-value=5.2e-41 Score=318.87 Aligned_cols=347 Identities=24% Similarity=0.287 Sum_probs=261.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCC--CCcchhhhHHHHHHHHHHHHHh-
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCD--GGPLSSLARASFNLHRSLAEEL- 127 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~- 127 (429)
+.++||+|||||++|+++|++|+++|++|+|||+..+++++|..++|++.+.... ......+..++.+.|+++.+.+
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 94 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGRTTSAAAGMLGAHAECEERDAFFDFAMHSQRLYKGLGEELY 94 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTTTHHHHCCCBCCGGGSCSSCSHHHHHHHHHHHHTTTHHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCcccchhcCceeccCccCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999998889999999999876542 3446677788888887765544
Q ss_pred ---CCCCCcCeeeeeeeEEeecccccC-CCCCccccCCCCCCCCCCCCCC-------CCcc-C-ccccceeEehHHHHHH
Q 014198 128 ---NGPDNYGYRALTTLSLTVTESQQS-GSKPSNKANSLIPSWVDGPARS-------PTTI-G-STQTTAQVHPQLFTKT 194 (429)
Q Consensus 128 ---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~-g-~~~~~~~~~~~~l~~~ 194 (429)
+. .+.+...|.+.+.......+ +...... ...++++..... .... + +.+..+.+++..+++.
T Consensus 95 ~~~~~--~~~~~~~g~l~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (382)
T 1ryi_A 95 ALSGV--DIRQHNGGMFKLAFSEEDVLQLRQMDDL---DSVSWYSKEEVLEKEPYASGDIFGASFIQDDVHVEPYFVCKA 169 (382)
T ss_dssp HHHCC--CCCCBCCCEEEEESSHHHHHHHHTTTTS---TTEEEEEHHHHHHHCTTSCTTCCEEEEETTCCBCCHHHHHHH
T ss_pred HhhCC--CcCeeecceEEEEeCHHHHHHHHHHhhc---CCeEEECHHHHHHhCCCCCcccceEEEeCCCeEEcHHHHHHH
Confidence 44 45677778777766543322 1110000 112222211100 0111 1 2456788999999999
Q ss_pred HHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHH-hhhcccccccceeeEEEecCC
Q 014198 195 LLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFE-LLASMFRVSGLKAHSIILEPK 272 (429)
Q Consensus 195 l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~-~~~~~~~~~~~~~~~~~~~~~ 272 (429)
|.+.+ ++.|+++++++ |+++..+ ++.+ .|.+.++ +++||.||+|+|.++..+. .++...++.+.+++++.++.+
T Consensus 170 l~~~~-~~~g~~i~~~~~v~~i~~~-~~~~-~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~~~~~~~~~~g~~~~~~~~ 245 (382)
T 1ryi_A 170 YVKAA-KMLGAEIFEHTPVLHVERD-GEAL-FIKTPSG-DVWANHVVVASGVWSGMFFKQLGLNNAFLPVKGECLSVWND 245 (382)
T ss_dssp HHHHH-HHTTCEEETTCCCCEEECS-SSSE-EEEETTE-EEEEEEEEECCGGGTHHHHHHTTCCCCCEEEEEEEEEEECC
T ss_pred HHHHH-HHCCCEEEcCCcEEEEEEE-CCEE-EEEcCCc-eEEcCEEEECCChhHHHHHHhcCCCCceeccceEEEEECCC
Confidence 99999 88899999999 9999877 5565 6777655 8999999999999998777 667777899999999888765
Q ss_pred CCCCCCCceeEeeeccCCCCCCCCCCCceEecCCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhccccCccc
Q 014198 273 EADAITPHALFLSYYPAQGEGGKPMDPEVYPRPTGEVYLCGMSSEQEVPDDPETVSGDPASIQVLKRVARTVSSHLGEEA 352 (429)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~~ 352 (429)
. ...+..++ . ...|+.|..+|.+++ |.+.+.. ..+..++++..+.+++.+.+++|.+.. .
T Consensus 246 ~--~~~~~~~~-~-----------~~~~~~p~~~g~~~v-G~~~~~~----~~~~~~~~~~~~~l~~~~~~~~p~l~~-~ 305 (382)
T 1ryi_A 246 D--IPLTKTLY-H-----------DHCYIVPRKSGRLVV-GATMKPG----DWSETPDLGGLESVMKKAKTMLPAIQN-M 305 (382)
T ss_dssp S--SCCCSEEE-E-----------TTEEEEECTTSEEEE-ECCCEET----CCCCSCCHHHHHHHHHHHHHHCGGGGG-S
T ss_pred C--CCccceEE-c-----------CCEEEEEcCCCeEEE-eeccccc----CCCCCCCHHHHHHHHHHHHHhCCCcCC-C
Confidence 4 22233332 1 135677887887655 5443321 233456778889999999999999887 7
Q ss_pred ccceeeeeecccCCCCCceeccCCCCCcEEEEecCCCccchhhHHHHHHHHHHHhcCCCCcccC-CCCCCCCcCCC
Q 014198 353 QVKAEQACFLPCTDDGVPVIGELPGIKGCYVGTGHNCWGILNGPATGAALAELVMDGCASIVDL-SRFSPARFGRP 427 (429)
Q Consensus 353 ~~~~~~~g~r~~t~d~~p~ig~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~~g~~~~~~~-~~~~~~R~~~~ 427 (429)
++.+.|+|+||.++|+.|++|++|+.+|+|+++|++|+|+++||.+|+.++++|. ++..+.|+ +.|+|+||..+
T Consensus 306 ~~~~~w~g~~~~t~d~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~-~~~~~~~~~~~~~~~Rf~~~ 380 (382)
T 1ryi_A 306 KVDRFWAGLRPGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIM-NKEVNQDWLHAFRIDRKEAV 380 (382)
T ss_dssp EEEEEEEEEEEECSSSCCEEEEETTEEEEEEEECCSSCTTTTHHHHHHHHHHHHT-TCCCCHHHHHHTCSCCC---
T ss_pred ceeeEEEEecccCCCCCcEeccCCCcCCEEEEEcCCcchHHHhHHHHHHHHHHHh-CCCCCchhhcCCChhhcccC
Confidence 7889999999999999999999988899999999999999999999999999995 55556777 99999999764
No 4
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=100.00 E-value=3.7e-40 Score=313.81 Aligned_cols=355 Identities=17% Similarity=0.211 Sum_probs=261.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCcc--ccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVAC--AASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGP 130 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~--~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 130 (429)
++||+|||||++|+++|++|+++|++|+|||+...++ ++|..+.++++..+.....+..+..++.+.|+++.++.+..
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 82 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQELWYELEKETHHK 82 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHHHCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHhCCc
Confidence 5799999999999999999999999999999998777 88888888888766555567888999999999998877652
Q ss_pred CCcCeeeeeeeEEeecccccC-CCCCcccc--CCCCCCCCCCCCCC--------CCc-cC-ccccceeEehHHHHHHHHH
Q 014198 131 DNYGYRALTTLSLTVTESQQS-GSKPSNKA--NSLIPSWVDGPARS--------PTT-IG-STQTTAQVHPQLFTKTLLN 197 (429)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~--------~~~-~g-~~~~~~~~~~~~l~~~l~~ 197 (429)
.+...|.+.+...+ ... ..+....+ .+...++++..... ... .+ +.+..++++|.++++.|.+
T Consensus 83 ---~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 158 (389)
T 2gf3_A 83 ---IFTKTGVLVFGPKG-ESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAYRE 158 (389)
T ss_dssp ---CEECCCEEEEEETT-CCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHHHHHHHHH
T ss_pred ---ceeecceEEEcCCC-chHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHHHHHHHHH
Confidence 36677777776542 111 00000000 12222333322111 011 11 2466789999999999999
Q ss_pred HHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHH-hhhcccccccceeeEEEecCCCCC
Q 014198 198 KAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFE-LLASMFRVSGLKAHSIILEPKEAD 275 (429)
Q Consensus 198 ~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 275 (429)
.+ ++.|+++++++ |++++.+ ++.+ .|++.+ .+++||.||+|+|.|+..+. .++..+|+.+.+++++.+++...
T Consensus 159 ~~-~~~Gv~i~~~~~v~~i~~~-~~~~-~v~~~~-g~~~a~~vV~A~G~~~~~l~~~~g~~~pl~~~rg~~~~~~~~~~- 233 (389)
T 2gf3_A 159 LA-EARGAKVLTHTRVEDFDIS-PDSV-KIETAN-GSYTADKLIVSMGAWNSKLLSKLNLDIPLQPYRQVVGFFESDES- 233 (389)
T ss_dssp HH-HHTTCEEECSCCEEEEEEC-SSCE-EEEETT-EEEEEEEEEECCGGGHHHHGGGGTEECCCEEEEEEEEEECCCHH-
T ss_pred HH-HHCCCEEEcCcEEEEEEec-CCeE-EEEeCC-CEEEeCEEEEecCccHHHHhhhhccCCceEEEEEEEEEEecCcc-
Confidence 99 88899999999 9999987 4443 466654 48999999999999999887 66767899999999998875430
Q ss_pred CC---CCceeEeeeccCCCCCCCCCCCceEecCCC-cEEEeccCCCC-CCCCCCCCCCC--CHHHHHHHHHHHHHhcccc
Q 014198 276 AI---TPHALFLSYYPAQGEGGKPMDPEVYPRPTG-EVYLCGMSSEQ-EVPDDPETVSG--DPASIQVLKRVARTVSSHL 348 (429)
Q Consensus 276 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~i~g~~~~~-~~~~~~~~~~~--~~~~~~~l~~~~~~~~p~l 348 (429)
.+ ...+.+..... ....|+.|..+| .+++ |.+... ....+..+... +++.++.+++.+.+++|.+
T Consensus 234 ~~~~~~~~p~~~~~~~-------~~~~y~~p~~~g~~~~i-G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l 305 (389)
T 2gf3_A 234 KYSNDIDFPGFMVEVP-------NGIYYGFPSFGGCGLKL-GYHTFGQKIDPDTINREFGVYPEDESNLRAFLEEYMPGA 305 (389)
T ss_dssp HHBGGGTCCEEEEEET-------TEEEEEECBSTTCCEEE-EESSCCEECCTTTCCCCTTSSHHHHHHHHHHHHHHCGGG
T ss_pred cccccccCCEEEEeCC-------CCcEEEcCCCCCCcEEE-EEcCCCCccCcccccCccCCCHHHHHHHHHHHHHhCCCC
Confidence 01 01122221100 112466677777 6765 444321 11112233445 7788899999999999998
Q ss_pred CcccccceeeeeecccCCCCCceeccCCCCCcEEEEecCCCccchhhHHHHHHHHHHHhcCCCCcccCCCCCCCCcCCC
Q 014198 349 GEEAQVKAEQACFLPCTDDGVPVIGELPGIKGCYVGTGHNCWGILNGPATGAALAELVMDGCASIVDLSRFSPARFGRP 427 (429)
Q Consensus 349 ~~~~~~~~~~~g~r~~t~d~~p~ig~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~~g~~~~~~~~~~~~~R~~~~ 427 (429)
.. .+.+.|+|+||.++|+.|+||++|+.+|+|+++|++|+|++++|++|+.++++|. ++..+.+++.|+|+||...
T Consensus 306 ~~--~~~~~w~g~r~~t~D~~p~ig~~~~~~~l~~a~G~~g~G~~~ap~~g~~la~~i~-~~~~~~~~~~~~~~Rf~~~ 381 (389)
T 2gf3_A 306 NG--ELKRGAVCMYTKTLDEHFIIDLHPEHSNVVIAAGFSGHGFKFSSGVGEVLSQLAL-TGKTEHDISIFSINRPALK 381 (389)
T ss_dssp CS--CEEEEEEEEEEECTTSCCEEEEETTEEEEEEEECCTTCCGGGHHHHHHHHHHHHH-HSCCSSCCGGGCTTCGGGT
T ss_pred CC--CceEEEEEEeccCCCCCeEEccCCCCCCEEEEECCccccccccHHHHHHHHHHHc-CCCCCCCcccccccccccc
Confidence 75 5778999999999999999999998899999999999999999999999999995 4555778999999999764
No 5
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=100.00 E-value=5.5e-40 Score=314.30 Aligned_cols=352 Identities=20% Similarity=0.258 Sum_probs=263.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHH-CC-CcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAK-KG-AAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELN 128 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~-~G-~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 128 (429)
+.++||+|||||++|+++|++|++ +| ++|+|||+..+++++|..++|+++..+... ....+..++.+.|+++.++.+
T Consensus 19 ~~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~~~~gas~~~~g~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~ 97 (405)
T 2gag_B 19 KKSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWLAGGNMARNTTIIRSNYLWD-ESAGIYEKSLKLWEQLPEDLE 97 (405)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSSTTCSGGGTSCCCBCCCCSSH-HHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCCCCCCcccccCceeeecCCCH-HHHHHHHHHHHHHHHHHHHhC
Confidence 346899999999999999999999 99 999999999988899999999998765433 345677788889999888776
Q ss_pred CCCCcCeeeeeeeEEeecccccC-CCCCccc--cCCCCCCCCCCCCCC-------------CCcc-C-ccccceeEehHH
Q 014198 129 GPDNYGYRALTTLSLTVTESQQS-GSKPSNK--ANSLIPSWVDGPARS-------------PTTI-G-STQTTAQVHPQL 190 (429)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~-------------~~~~-g-~~~~~~~~~~~~ 190 (429)
. ++.+...|.+.+........ ..+.... ..+..+++++..... .... + +.+..++++|..
T Consensus 98 ~--~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (405)
T 2gag_B 98 Y--DFLFSQRGVLNLAHTLGDVRESVRRVEANKLNGVDAEWLDPSQVKEACPIINTSDDIRYPVMGATWQPRAGIAKHDH 175 (405)
T ss_dssp C--CCCCBCCCEEEEECSHHHHHHHHHHHHHHHTBTCCCEEECHHHHHHHCTTSCCSTTSSSCCCEEEEETTCBBCCHHH
T ss_pred C--CcCEecccEEEEEcCHHHHHHHHHHHHHHHhcCCCceEeCHHHHHhhCCCCcccccccccceeEEEeCCCccCCHHH
Confidence 6 55677778887766543221 0000000 012222333221100 0111 1 346788999999
Q ss_pred HHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHH-hhhcccccccceeeEEE
Q 014198 191 FTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFE-LLASMFRVSGLKAHSII 268 (429)
Q Consensus 191 l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~-~~~~~~~~~~~~~~~~~ 268 (429)
+++.|.+.+ ++.|+++++++ |+++..+ +++++.|++.++ +++||.||+|+|+|+..+. .++...|+.+.+++++.
T Consensus 176 ~~~~l~~~~-~~~g~~i~~~~~v~~i~~~-~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g~~~~~~~~~~~~~~ 252 (405)
T 2gag_B 176 VAWAFARKA-NEMGVDIIQNCEVTGFIKD-GEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAGFELPIQSHPLQALV 252 (405)
T ss_dssp HHHHHHHHH-HHTTCEEECSCCEEEEEES-SSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHTCCCCEEEEEEEEEE
T ss_pred HHHHHHHHH-HHCCCEEEcCCeEEEEEEe-CCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcCCCCCccccceeEEE
Confidence 999999999 88899999999 9999987 677777888766 7999999999999998777 67777889999998887
Q ss_pred ecCCCCCCCCCceeEeeeccCCCCCCCCCCCceEecCCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcccc
Q 014198 269 LEPKEADAITPHALFLSYYPAQGEGGKPMDPEVYPRPTGEVYLCGMSSEQEVPDDPETVSGDPASIQVLKRVARTVSSHL 348 (429)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l 348 (429)
+++.. +.... ++.+. ....|+.|..+|.+++++..... ...+...+.+..+.+++.+.+++|.+
T Consensus 253 ~~~~~--~~~~~-~~~~~---------~~~~y~~p~~~g~~~ig~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~p~l 316 (405)
T 2gag_B 253 SELFE--PVHPT-VVMSN---------HIHVYVSQAHKGELVMGAGIDSY----NGYGQRGAFHVIQEQMAAAVELFPIF 316 (405)
T ss_dssp EEEBC--SCCCS-EEEET---------TTTEEEEECTTSEEEEEEEECSS----CCCSSCCCTHHHHHHHHHHHHHCGGG
T ss_pred ecCCc--cccCc-eEEeC---------CCcEEEEEcCCCcEEEEeccCCC----CccccCCCHHHHHHHHHHHHHhCCcc
Confidence 76432 22122 22221 12346667778877665433221 11233456778899999999999999
Q ss_pred CcccccceeeeeecccCCCCCceeccCCCCCcEEEEecCCCccchhhHHHHHHHHHHHhcCCCCcccCCCCCCCCcCCC
Q 014198 349 GEEAQVKAEQACFLPCTDDGVPVIGELPGIKGCYVGTGHNCWGILNGPATGAALAELVMDGCASIVDLSRFSPARFGRP 427 (429)
Q Consensus 349 ~~~~~~~~~~~g~r~~t~d~~p~ig~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~~g~~~~~~~~~~~~~R~~~~ 427 (429)
.+ .++.+.|+|+||.++|+.|+||++| .+|+|+++|++|+|++++|.+|+.++++|.++ ..+.+++.|+|+||..+
T Consensus 317 ~~-~~~~~~w~g~~~~t~d~~p~ig~~~-~~~l~~~~G~~g~G~~~a~~~g~~la~~i~g~-~~~~~~~~~~~~R~~~~ 392 (405)
T 2gag_B 317 AR-AHVLRTWGGIVDTTMDASPIISKTP-IQNLYVNCGWGTGGFKGTPGAGFTLAHTIAND-EPHELNKPFSLERFETG 392 (405)
T ss_dssp GG-CEECEEEEEEEEEETTSCCEEEECS-SBTEEEEECCGGGCSTTHHHHHHHHHHHHHHT-SCCTTTTTSCSTHHHHT
T ss_pred cc-CCcceEEeeccccCCCCCCEecccC-CCCEEEEecCCCchhhHHHHHHHHHHHHHhCC-CCCccccccCcchhcCC
Confidence 87 7788999999999999999999987 78999999999999999999999999999544 44567999999999654
No 6
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=100.00 E-value=1e-39 Score=316.39 Aligned_cols=351 Identities=15% Similarity=0.203 Sum_probs=260.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC-CcEEEEcC-CCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKG-AAVTLIEK-SSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNG 129 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G-~~V~lie~-~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 129 (429)
.++||+|||||++|+++|++|+++| ++|+|||+ ..++.++|..++|+++..+.. .....+..++.+.|+++... +.
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~~~g~S~~~~g~i~~~~~~-~~~~~l~~~~~~~~~~l~~~-g~ 99 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAPGSGDSGRSMAAFRTFFSS-TMNRLVAGSTVRLFEDAQRG-GE 99 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSSTTCSGGGSSCCEEECCCSS-HHHHHHHHHHHHHHHHHHHT-TC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCCCCCcccCCCcEecccCCC-HHHHHHHHHHHHHHHHHHhc-Cc
Confidence 3589999999999999999999999 99999999 668889999999999885533 33567778888899988776 43
Q ss_pred CCCcCeeeeeeeEEeecccccC-C---CCCccccCCCCC-----CCC-----------CCCCCC----CCcc-C-ccccc
Q 014198 130 PDNYGYRALTTLSLTVTESQQS-G---SKPSNKANSLIP-----SWV-----------DGPARS----PTTI-G-STQTT 183 (429)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~-----~~~-----------~~~~~~----~~~~-g-~~~~~ 183 (429)
++.+...+.+. ..+..... + .+.... .+... +++ +..... .... + +.+..
T Consensus 100 --~~~~~~~g~l~-~~~~~~~~~~~~~~~~~~~-~g~~~~p~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (448)
T 3axb_A 100 --DLGLVKSGYLF-VYDRERWREVEEPLREAGE-EGRDYLIIPPEELERRLGMNTRVSDGEEAEVLGVGDVEGAVLIRSA 175 (448)
T ss_dssp --CCCCBCCCEEE-EECHHHHHHHHHHHTTSCC-BTTTEEEECHHHHHHHHCCCCCCTTSSHHHHHTCCCCCEEEEESSE
T ss_pred --ccccccCCEEE-EcCHHHHHHHHHHHHHHHh-hCCCccccchhhhhhcccccccCCCHHHHHhccCCCceEEEEeCCC
Confidence 45566677766 43332211 0 011111 11112 222 222111 1111 1 24567
Q ss_pred eeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEE---------------ccCCcEEEEEEeCCeEE--EcCEEEEcCCC
Q 014198 184 AQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGV---------------GEGGRVESVMIEGGRVV--ESDAVVLALGP 245 (429)
Q Consensus 184 ~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~---------------~~~g~v~~v~~~~g~~i--~ad~vV~a~G~ 245 (429)
+++++.++++.|.+.+ ++.|+++++++ |++|.. + ++++++|.+.+| ++ +||.||+|+|+
T Consensus 176 ~~~~~~~l~~~L~~~~-~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~-~~~v~~V~t~~g-~i~~~Ad~VV~AtG~ 252 (448)
T 3axb_A 176 GFLDAEKVVDYYYRRA-SGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQ-EARASAAVLSDG-TRVEVGEKLVVAAGV 252 (448)
T ss_dssp EECCHHHHHHHHHHHH-HHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTS-CEEEEEEEETTS-CEEEEEEEEEECCGG
T ss_pred eEEcHHHHHHHHHHHH-HhCCCEEEcCCeEEEEEecccccccccccccccC-CCceEEEEeCCC-EEeecCCEEEECCCc
Confidence 8899999999999999 88899999999 999987 4 666777888766 68 99999999999
Q ss_pred CchHHH-hhhcccccccceeeEEEecCCCCCCCCC------------ceeEeeeccCCCCCCCCCCCceEecCC-CcEEE
Q 014198 246 WSGKFE-LLASMFRVSGLKAHSIILEPKEADAITP------------HALFLSYYPAQGEGGKPMDPEVYPRPT-GEVYL 311 (429)
Q Consensus 246 ~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~i 311 (429)
|+..+. .++...++.+.+++++.++.... .+.. .+++.+ ....|+.|..+ |.+++
T Consensus 253 ~s~~l~~~~g~~~~~~p~rg~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~----------~~~~y~~p~~~~g~~~i 321 (448)
T 3axb_A 253 WSNRLLNPLGIDTFSRPKKRMVFRVSASTE-GLRRIMREGDLAGAGAPPLIIL----------PKRVLVRPAPREGSFWV 321 (448)
T ss_dssp GHHHHHGGGTCCCSEEEEEEEEEEEECCSH-HHHHHHHHCCTTSSSSCCEEEE----------TTTEEEEEETTTTEEEE
T ss_pred CHHHHHHHcCCCCcccccceEEEEeCCccc-ccccccccccccccCCCceEEc----------CCceEEeecCCCCeEEE
Confidence 999887 67778899999999999876531 0111 122222 12356677777 66754
Q ss_pred eccCCCCCCCCCCCCC--CCCHHH-HHHHHHHHHHhccccCcccccceeeeeeccc-CCCCCceeccCCCCCcEEEEecC
Q 014198 312 CGMSSEQEVPDDPETV--SGDPAS-IQVLKRVARTVSSHLGEEAQVKAEQACFLPC-TDDGVPVIGELPGIKGCYVGTGH 387 (429)
Q Consensus 312 ~g~~~~~~~~~~~~~~--~~~~~~-~~~l~~~~~~~~p~l~~~~~~~~~~~g~r~~-t~d~~p~ig~~~~~~~~~~~~G~ 387 (429)
|++..... ....+. .++.+. .+.+++.+.+++|.+.+ .++.+.|+|+||. ++|+.|+||++| +|+|+++|+
T Consensus 322 -G~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~-~~~~~~w~G~r~~~t~d~~p~ig~~~--~~l~~a~G~ 396 (448)
T 3axb_A 322 -QLSDNLGR-PFALEEDPQPEEHYYSLAILPILSLYLPQFQD-AYPSGGWAGHYDISFDANPVVFEPWE--SGIVVAAGT 396 (448)
T ss_dssp -EECCCTTS-CBCCCSSCCCCHHHHHHHTHHHHHHHCGGGTT-CCCSEEEEEEEEEETTSSCEEECGGG--CSEEEEECC
T ss_pred -ecCCcccC-CcccccccCCChHHHHHHHHHHHHHhCcCccc-CCcccceEEEeccccCCCCcEeeecC--CCEEEEECC
Confidence 55543211 111223 567777 89999999999999987 7888999999999 999999999998 999999999
Q ss_pred CCccchhhHHHHHHHHHHHhcCCCCc-------ccCCCCC-CCC-cCCCC
Q 014198 388 NCWGILNGPATGAALAELVMDGCASI-------VDLSRFS-PAR-FGRPS 428 (429)
Q Consensus 388 ~~~G~~~a~~~a~~la~~i~~g~~~~-------~~~~~~~-~~R-~~~~~ 428 (429)
+|+|++++|++|+.++++|. +...+ .|++.|+ |+| |.+..
T Consensus 397 ~g~G~~~ap~~g~~la~~i~-~~~~~~~~~~~~~~~~~~~~~~R~f~~~~ 445 (448)
T 3axb_A 397 SGSGIMKSDSIGRVAAAVAL-GMESVELYGGVEMPVKWMGLEGRRYEQER 445 (448)
T ss_dssp TTCCGGGHHHHHHHHHHHHT-TCSEEECTTSCEEEGGGGSSTTCCCCCCS
T ss_pred CchhHhHhHHHHHHHHHHHc-CCCcccccccceecHhHcCccccccccCC
Confidence 99999999999999999995 44445 7899999 999 98653
No 7
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=100.00 E-value=3.9e-39 Score=304.85 Aligned_cols=350 Identities=16% Similarity=0.200 Sum_probs=246.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCcc--ccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVAC--AASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGP 130 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~--~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 130 (429)
++||+|||||++|+++|++|+++|++|+|||+...+. +++..+.+++...+.....+..+..++.++|+++. +.+..
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~-~~~~~ 80 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVPLVLRAQMLWDELS-RHNED 80 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSSSSCCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHH-TTCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCccceeeeccCCCchHHHHHHHHHHHHHHHH-HhCCC
Confidence 4799999999999999999999999999999998554 33344445665545444557788899999999987 54431
Q ss_pred CCcCeeeeeeeEEeecccccC--CCCCccccCCCCCCCCCCCCCC--------CCc-cC-ccccceeEehHHHHHHHHHH
Q 014198 131 DNYGYRALTTLSLTVTESQQS--GSKPSNKANSLIPSWVDGPARS--------PTT-IG-STQTTAQVHPQLFTKTLLNK 198 (429)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--------~~~-~g-~~~~~~~~~~~~l~~~l~~~ 198 (429)
...+...|.+.+...+.... ..+.... .+...++++..... ... .+ +.+..++++|..+++.|.+.
T Consensus 81 -~~~~~~~g~l~~~~~~~~~~~~~~~~~~~-~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~ 158 (372)
T 2uzz_A 81 -DPIFVRSGVINLGPADSTFLANVAHSAEQ-WQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQL 158 (372)
T ss_dssp -SCSEECCCEEEEEETTCHHHHHHHHHHHH-TTCCEEEEEHHHHHHHCTTCCCCTTEEEEEESSCEEEEHHHHHHHHHHH
T ss_pred -ccceeeeceEEEeCCCcHHHHHHHHHHHH-cCCCcEecCHHHHHhhCCCccCCCCceEEEeCCCcEEcHHHHHHHHHHH
Confidence 23466778777765432110 0000000 12222333221110 011 11 35778999999999999999
Q ss_pred HHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHHhhhcccccccceeeEEEecCCCCCCC
Q 014198 199 AVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFELLASMFRVSGLKAHSIILEPKEADAI 277 (429)
Q Consensus 199 ~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (429)
+ ++.|+++++++ |+++..+ ++.+ .|++.++ +++||.||+|+|+|+..+.. .+|+.+.+++++.+..+. .+
T Consensus 159 ~-~~~G~~i~~~~~V~~i~~~-~~~~-~v~~~~g-~~~a~~vV~a~G~~s~~l~~---~l~~~p~rg~~~~~~~~~--~~ 229 (372)
T 2uzz_A 159 A-KEAGCAQLFNCPVTAIRHD-DDGV-TIETADG-EYQAKKAIVCAGTWVKDLLP---ELPVQPVRKVFAWYQADG--RY 229 (372)
T ss_dssp H-HHTTCEEECSCCEEEEEEC-SSSE-EEEESSC-EEEEEEEEECCGGGGGGTST---TCCCEEEECCEEEECCCG--GG
T ss_pred H-HHCCCEEEcCCEEEEEEEc-CCEE-EEEECCC-eEEcCEEEEcCCccHHhhcc---ccCceEEEEEEEEEEecc--cc
Confidence 9 88899999999 9999987 4443 5777665 59999999999999987763 468889999988877543 22
Q ss_pred C---CceeEeeeccCCCCCCCCCCCceEecCCCcEEEeccCCC---CCCCCCCCCCCCCHHHHHHHHHHHHHhccccCcc
Q 014198 278 T---PHALFLSYYPAQGEGGKPMDPEVYPRPTGEVYLCGMSSE---QEVPDDPETVSGDPASIQVLKRVARTVSSHLGEE 351 (429)
Q Consensus 278 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~g~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~ 351 (429)
. ..+.+.. ....+ ...|+.|+.++.+++ |.+.. .+.+.+..+...+.+..+.+++.+.+++|.+.+
T Consensus 230 ~~~~~~p~~~~-~~~~~-----~~~y~~p~~~~~~~i-G~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~- 301 (372)
T 2uzz_A 230 SVKNKFPAFTG-ELPNG-----DQYYGFPAENDALKI-GKHNGGQVIHSADERVPFAEVVSDGSEAFPFLRNVLPGIGC- 301 (372)
T ss_dssp STTTTCCEEEE-ECTTC-----CEEEEECCSSSCEEE-EESSCCEECCSGGGCCCTTTSTTGGGSSHHHHHHHSCSCCC-
T ss_pred CccccCCEEEE-ecCCC-----CeEEecCCCCCeEEE-EecCCCCccCChhhccCCCCCHHHHHHHHHHHHHHCCCCCc-
Confidence 1 1122211 00011 124555777777765 44431 111111122233456678899999999998864
Q ss_pred cccceeeeeecccCCCCCceeccCCCCCcEEEEecCCCccchhhHHHHHHHHHHHhcCCCCcccCCCCCCCCcC
Q 014198 352 AQVKAEQACFLPCTDDGVPVIGELPGIKGCYVGTGHNCWGILNGPATGAALAELVMDGCASIVDLSRFSPARFG 425 (429)
Q Consensus 352 ~~~~~~~~g~r~~t~d~~p~ig~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~~g~~~~~~~~~~~~~R~~ 425 (429)
+...|+|+||.|+|+.|+||++|+.+|+|+++|++|+|++++|++|++++++|. ++..+.+++.|+|+||.
T Consensus 302 --~~~~~~g~r~~t~d~~p~ig~~~~~~~l~~~~G~~g~G~~~ap~~g~~la~~i~-~~~~~~~~~~~~~~Rf~ 372 (372)
T 2uzz_A 302 --CLYGAACTYDNSPDEDFIIDTLPGHDNTLLITGLSGHGFKFASVLGEIAADFAQ-DKKSDFDLTPFRLSRFQ 372 (372)
T ss_dssp --EEEECCCEEEECTTSCCCEEEETTEEEEEEECCCCSCCGGGHHHHHHHHHHHHT-TCCCSSCCGGGCSTTCC
T ss_pred --cceeeEEeeccCCCCCeEEecCCCCCCEEEEeCCCccchhccHHHHHHHHHHHh-CCCCCCCccccCcCCCC
Confidence 678899999999999999999998899999999999999999999999999994 55567889999999994
No 8
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=100.00 E-value=1.2e-38 Score=323.08 Aligned_cols=350 Identities=19% Similarity=0.198 Sum_probs=256.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC-CccccccccCCeeeeccCCCC-cchhhhHHHHHHHHHHHHHhCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS-VACAASGKAGGFLALDWCDGG-PLSSLARASFNLHRSLAEELNG 129 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~-~~~~~s~~~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~ 129 (429)
..+||+|||||++|+++|+.|+++|++|+||||+. ++.++|++++|.+++...... ....+...+.....++.++++.
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 350 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPV 350 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcccccCccCCCceecCcCCCCccHHHHHHHHHHHHHHHHHHHCCC
Confidence 45899999999999999999999999999999976 888999999999987654332 2344444444455556666654
Q ss_pred CCCcCeeeeeeeEEeecccccCCCCCccccCCCC---CCCCCCCCCC-----CCccC--ccccceeEehHHHHHHHHHHH
Q 014198 130 PDNYGYRALTTLSLTVTESQQSGSKPSNKANSLI---PSWVDGPARS-----PTTIG--STQTTAQVHPQLFTKTLLNKA 199 (429)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-----~~~~g--~~~~~~~~~~~~l~~~l~~~~ 199 (429)
.+.+...|.+.+..+.......+.... .+.. +++++..... ....+ +.+..+++++..+++.|.+.+
T Consensus 351 --~~~~~~~g~l~~~~~~~~~~~~~~~~~-~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~~a 427 (676)
T 3ps9_A 351 --KFDHDWCGVTQLGWDEKSQHKIAQMLS-MDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELA 427 (676)
T ss_dssp --CCCEECCCEEEECCSHHHHHHHHHHHT-SCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHHHHH
T ss_pred --CcCcCcCCeeeecCCHHHHHHHHHHHh-cCCcHHHhhhCCHHHHHHhhCCCccCCcEEecCCeeeCHHHHHHHHHHHH
Confidence 556677787777665443321000000 1111 1133322110 11112 357789999999999999999
Q ss_pred HhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHHhhhcccccccceeeEEEecCCCCCCCC
Q 014198 200 VNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFELLASMFRVSGLKAHSIILEPKEADAIT 278 (429)
Q Consensus 200 ~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (429)
++.|++|++++ |++|..+ ++++ .|++.+|.+++||.||+|+|+|+..+... ..+|+.+.+++++.++... ...
T Consensus 428 -~~~Gv~i~~~t~V~~l~~~-~~~v-~V~t~~G~~i~Ad~VVlAtG~~s~~l~~~-~~lpl~p~rGq~~~~~~~~--~~~ 501 (676)
T 3ps9_A 428 -QQQGLQIYYQYQLQNFSRK-DDCW-LLNFAGDQQATHSVVVLANGHQISRFSQT-STLPVYSVAGQVSHIPTTP--ELA 501 (676)
T ss_dssp -HHTTCEEEESCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECCGGGGGCSTTT-TTCSCEEEEEEEEEEECCT--TGG
T ss_pred -HhCCCEEEeCCeeeEEEEe-CCeE-EEEECCCCEEECCEEEECCCcchhccccc-cCCcceeecCEEEEECCCc--ccc
Confidence 88899999999 9999987 5554 68887778899999999999999877632 2468899999999987644 221
Q ss_pred CceeEeeeccCCCCCCCCCCCceEecC--CCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhccccCc----cc
Q 014198 279 PHALFLSYYPAQGEGGKPMDPEVYPRP--TGEVYLCGMSSEQEVPDDPETVSGDPASIQVLKRVARTVSSHLGE----EA 352 (429)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~----~~ 352 (429)
....... .+.|+.|.. +|.++ +|++.+.. ..+...+.+..+.+++.+.+++|.+.. +.
T Consensus 502 ~l~~~l~-----------~~~Yl~P~~~~~g~~~-iG~t~~~~----~~d~~~~~~~~~~~l~~l~~~~P~l~~~~~~d~ 565 (676)
T 3ps9_A 502 ELKQVLC-----------YDGYLTPQNPANQHHC-IGASYHRG----SEDTAYSEDDQQQNRQRLIDCFPQAQWAKEVDV 565 (676)
T ss_dssp GCCSEEE-----------SSSEECCCBTTTTEEE-EECCCEET----CCCCCCCHHHHHHHHHHHHHHSTTCHHHHTCCC
T ss_pred cCCceeE-----------CCeeeccccCCCCeEE-EeeccCCC----CCCCCCCHHHHHHHHHHHHHhCCCccccccCcc
Confidence 1111111 124677776 56665 45554422 234567788889999999999998751 13
Q ss_pred ccceeeeeecccCCCCCceeccCCC-----------------------CCcEEEEecCCCccchhhHHHHHHHHHHHhcC
Q 014198 353 QVKAEQACFLPCTDDGVPVIGELPG-----------------------IKGCYVGTGHNCWGILNGPATGAALAELVMDG 409 (429)
Q Consensus 353 ~~~~~~~g~r~~t~d~~p~ig~~~~-----------------------~~~~~~~~G~~~~G~~~a~~~a~~la~~i~~g 409 (429)
.+.+.|+|+||.++|+.|+||++|+ .+|+|+++|++|+|+++||++|++++++| .|
T Consensus 566 ~~~~~~~G~R~~t~D~lPiiG~~p~~~~~~~~y~~l~~~~~~~~~~~~~~~l~~a~G~g~~Gl~~Ap~~ae~lA~~i-~g 644 (676)
T 3ps9_A 566 SDKEARCGVRCATRDHLPMVGNVPDYEATLVEYASLAEQKDEAVSAPVFDDLFMFAALGSRGLCSAPLCAEILAAQM-SD 644 (676)
T ss_dssp TTCCEEEEEEEECTTCCCEEEEEECHHHHHHHTTTTTSCCTTCCSCCEEEEEEEEECCTTCHHHHHHHHHHHHHHHH-TT
T ss_pred cccceEEEEeCccCCcCCccCcCCChHHHHHHHHhhhccccccccCCCCCCEeeeecccccHHHHHHHHHHHHHHHH-cC
Confidence 4679999999999999999999986 68999999999999999999999999999 67
Q ss_pred CCCccc---CCCCCCCCcCCC
Q 014198 410 CASIVD---LSRFSPARFGRP 427 (429)
Q Consensus 410 ~~~~~~---~~~~~~~R~~~~ 427 (429)
++.+.+ ++.|+|+||..+
T Consensus 645 ~~~pl~~~~l~~~~p~Rf~~r 665 (676)
T 3ps9_A 645 EPIPMDASTLAALNPNRLWVR 665 (676)
T ss_dssp CCCSSBHHHHHTTCTTHHHHH
T ss_pred CCCCCCHHHHhhhChHHhHHH
Confidence 777777 899999999643
No 9
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=100.00 E-value=1e-38 Score=323.67 Aligned_cols=349 Identities=16% Similarity=0.162 Sum_probs=253.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC-CccccccccCCeeeeccCCCC-cchhhh----HHHHHHHHHHHH
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS-VACAASGKAGGFLALDWCDGG-PLSSLA----RASFNLHRSLAE 125 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~-~~~~~s~~~~g~~~~~~~~~~-~~~~l~----~~~~~~~~~~~~ 125 (429)
..+||+|||||++|+++|++|+++|++|+|||++. ++.++|++++|++++.+.... ...++. ..+.++|+++..
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~ 342 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQPAQGASGNRQGALYPLLNGKNDALETFFTSAFTFARRQYDQLLE 342 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSSTTCSGGGCSCEEECCCCCSSCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCccccccccccCCEEecCCCCCChHHHHHHHHHHHHHHHHHHHhhh
Confidence 46899999999999999999999999999999986 888999999999987654332 233332 235556665532
Q ss_pred HhCCCCCcCeeeeeeeEEeecccccCCCCCccccCCCC---CCCCCCCCCC-----CCccC--ccccceeEehHHHHHHH
Q 014198 126 ELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKANSLI---PSWVDGPARS-----PTTIG--STQTTAQVHPQLFTKTL 195 (429)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-----~~~~g--~~~~~~~~~~~~l~~~l 195 (429)
.+. .+.+...|.+.+............... .+.. .++++..... ....+ +.+..++++|..+++.|
T Consensus 343 -~~~--~~~~~~~g~l~~~~~~~~~~~~~~~~~-~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL 418 (689)
T 3pvc_A 343 -QGI--AFDHQWCGVSQLAFDDKSRGKIEKMLH-TQWPVEFAEAMSREQLSELAGLDCAHDGIHYPAGGWLCPSDLTHAL 418 (689)
T ss_dssp -TTC--CCCEECCCEEEECCSHHHHHHHHHHTT-SCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHH
T ss_pred -hcc--ccccccCceEEeccCHHHHHHHHHHHh-cCCChHHhhccCHHHHHHhcCCCcccceEEecCCeEECHHHHHHHH
Confidence 122 556777888877765543320000000 1111 1133321110 11112 35778999999999999
Q ss_pred HHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCe-EEEcCEEEEcCCCCchHHHhhhcccccccceeeEEEecCCC
Q 014198 196 LNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGR-VVESDAVVLALGPWSGKFELLASMFRVSGLKAHSIILEPKE 273 (429)
Q Consensus 196 ~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~-~i~ad~vV~a~G~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (429)
.+.+ ++.|++|++++ |++|..+ ++++ .|++.+|. +++||.||+|+|+|+..+... ..+|+.+.++|++.++...
T Consensus 419 ~~~a-~~~Gv~i~~~t~V~~l~~~-~~~v-~V~t~~G~~~i~Ad~VVlAtG~~s~~l~~~-~~lpl~p~rGq~~~~~~~~ 494 (689)
T 3pvc_A 419 MMLA-QQNGMTCHYQHELQRLKRI-DSQW-QLTFGQSQAAKHHATVILATGHRLPEWEQT-HHLPLSAVRGQVSHIPTTP 494 (689)
T ss_dssp HHHH-HHTTCEEEESCCEEEEEEC-SSSE-EEEEC-CCCCEEESEEEECCGGGTTCSTTT-TTSCCEEEEEEEEEEECCT
T ss_pred HHHH-HhCCCEEEeCCeEeEEEEe-CCeE-EEEeCCCcEEEECCEEEECCCcchhccccc-cCCccccccCcEEEECCCC
Confidence 9999 88899999999 9999987 5554 67887776 899999999999999887722 2468899999999987654
Q ss_pred CCCCCCceeEeeeccCCCCCCCCCCCceEecC--CCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhccccCc-
Q 014198 274 ADAITPHALFLSYYPAQGEGGKPMDPEVYPRP--TGEVYLCGMSSEQEVPDDPETVSGDPASIQVLKRVARTVSSHLGE- 350 (429)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~- 350 (429)
.......+.. .+.|+.|.. +|.++ +|++.+.. ..+...+.+..+.+++.+.+++|.+..
T Consensus 495 --~~~~l~~v~~-----------~~~Yl~P~~~~~g~~~-iGat~~~~----~~d~~~~~~~~~~ll~~l~~~~P~l~~~ 556 (689)
T 3pvc_A 495 --VLSQLQQVLC-----------YDGYLTPVNPANQHHC-IGASYQRG----DIATDFRLTEQQENRERLLRCLPQVSWP 556 (689)
T ss_dssp --TGGGCCSEEE-----------SSSEECCCBTTTTEEE-EECCCEET----BCCCCCCHHHHHHHHHHHHHHCTTCSGG
T ss_pred --ccccCCeeEe-----------CCceEccccCCCCeEE-EEEeccCC----CCCCCCCHHHHHHHHHHHHHhCCCcccc
Confidence 2211111121 124677776 66665 56554422 234566788889999999999998762
Q ss_pred ---ccccceeeeeecccCCCCCceeccCCC-------------------------------CCcEEEEecCCCccchhhH
Q 014198 351 ---EAQVKAEQACFLPCTDDGVPVIGELPG-------------------------------IKGCYVGTGHNCWGILNGP 396 (429)
Q Consensus 351 ---~~~~~~~~~g~r~~t~d~~p~ig~~~~-------------------------------~~~~~~~~G~~~~G~~~a~ 396 (429)
...+.+.|+|+||.++|+.|+||++|+ .+|+|+++|++|+|+++||
T Consensus 557 ~~~~~~~~~~w~G~R~~t~D~lPiiG~~p~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~l~~a~G~g~~Gl~~ap 636 (689)
T 3pvc_A 557 QQVDVSDNQARCGVRCAIRDHLPMVGAVPDYAATLAQYQDLSRRIQHGGESEVNDIAVAPVWPELFMVGGLGSRGLCSAP 636 (689)
T ss_dssp GGCCCTTCCEEEEEEEECTTSCCEEEEEECHHHHHHHSTTHHHHC--------CCCCCCCEEEEEEEEECCTTCHHHHHH
T ss_pred ccccccccceeEEEeeecCCCCcccCcCCCHHHHHHHHHhhhccccccccccccccccCCCCCChHHhhcccccHHHHHH
Confidence 134679999999999999999999986 5899999999999999999
Q ss_pred HHHHHHHHHHhcCCCCccc---CCCCCCCCcCCC
Q 014198 397 ATGAALAELVMDGCASIVD---LSRFSPARFGRP 427 (429)
Q Consensus 397 ~~a~~la~~i~~g~~~~~~---~~~~~~~R~~~~ 427 (429)
++|++|+++| .|++.+.| ++.|+|+||..+
T Consensus 637 ~~ae~lA~~i-~g~~~p~~~~~l~~~~p~Rf~~r 669 (689)
T 3pvc_A 637 LVAEILAAQM-FGEPLPLDAKTLAALNPNRFWIR 669 (689)
T ss_dssp HHHHHHHHHH-TTCCCSSCHHHHHTTCTTHHHHH
T ss_pred HHHHHHHHHH-cCCCCCCCHHHHhhcChhHHHHH
Confidence 9999999999 57777877 899999999643
No 10
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=100.00 E-value=5.7e-37 Score=292.48 Aligned_cols=358 Identities=17% Similarity=0.199 Sum_probs=246.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCcc--ccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVAC--AASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNG 129 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~--~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 129 (429)
..+||+|||||++|+++|++|+++|++|+||||...+. ++|..+.+++...+.. .....+..++.+.|+++.++.+.
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~~~gas~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~ 81 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFNENGGTSGAERHWRLQYTQ-EDLFRLTLETLPLWRALESRCER 81 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTCSSSSCCSSEEEECSCCSS-HHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCcCeEEEeccCc-chhhhHHHHHHHHHHHHHHHhCc
Confidence 35899999999999999999999999999999998665 7777777776543322 23456778888999998877665
Q ss_pred CCCcCeeeeeeeEEeeccc--ccC-CCCCcccc--CCCCCCCCCCCCCC--------CCcc-C-ccccceeEehHHHHHH
Q 014198 130 PDNYGYRALTTLSLTVTES--QQS-GSKPSNKA--NSLIPSWVDGPARS--------PTTI-G-STQTTAQVHPQLFTKT 194 (429)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~--~~~~~~~~~~~~~~--------~~~~-g-~~~~~~~~~~~~l~~~ 194 (429)
. + +...|.+.+..... ... ..+....+ .+...++++..... .... + +.+..++++|..+++.
T Consensus 82 ~--~-~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~ 158 (397)
T 2oln_A 82 R--L-IHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGFRGLPRDYEGFLQPDGGTIDVRGTLAA 158 (397)
T ss_dssp C--C-EECCCEEEEECSSCCBTTBCHHHHHHHHHHTTCCCEEEEHHHHHHHHCCCSCCTTCEEEEETTCEEEEHHHHHHH
T ss_pred c--H-HHHCCcEEEcCCCccchhHHHHHHHHHHHHcCCCceecCHHHHHhhCcCccCCCceeEEEcCCCCEEcHHHHHHH
Confidence 2 2 56667776655432 000 00000000 12222222211110 0011 1 3467789999999999
Q ss_pred HHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHH-hhhcccccccceeeEEEecCC
Q 014198 195 LLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFE-LLASMFRVSGLKAHSIILEPK 272 (429)
Q Consensus 195 l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~-~~~~~~~~~~~~~~~~~~~~~ 272 (429)
|.+.+ ++.|+++++++ |++|..+ ++.+ .|.+.+ .+++||.||+|+|+|+..+. .++..+|+.+.+++.+.++..
T Consensus 159 l~~~a-~~~Gv~i~~~~~V~~i~~~-~~~v-~v~t~~-g~i~a~~VV~A~G~~s~~l~~~~g~~~p~~~~~~~~~~~~~~ 234 (397)
T 2oln_A 159 LFTLA-QAAGATLRAGETVTELVPD-ADGV-SVTTDR-GTYRAGKVVLACGPYTNDLLEPLGARLAYSVYEMAIAAYRQA 234 (397)
T ss_dssp HHHHH-HHTTCEEEESCCEEEEEEE-TTEE-EEEESS-CEEEEEEEEECCGGGHHHHHGGGTCCCCEEEEEEEEEEEEBC
T ss_pred HHHHH-HHcCCEEECCCEEEEEEEc-CCeE-EEEECC-CEEEcCEEEEcCCcChHHHhhhcCCCCCeeEEEEEEEEEeec
Confidence 99999 88899999999 9999987 5554 366654 48999999999999988887 677778999999999888755
Q ss_pred CCCCCCCceeEeeeccCCCCCCCCCCCceEecCCC----cEEEeccCCC--CCCCCCCCCCCCCHHHHHHHHHHHHHhcc
Q 014198 273 EADAITPHALFLSYYPAQGEGGKPMDPEVYPRPTG----EVYLCGMSSE--QEVPDDPETVSGDPASIQVLKRVARTVSS 346 (429)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~i~g~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~p 346 (429)
.. .+ ..+.+..... .++. .....|+.|..++ .++ +|.+.. .....+..+...+++..+.+++.+.+++|
T Consensus 235 ~~-~~-~~p~~~~~~~-~~~~-~~~~~y~~p~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p 309 (397)
T 2oln_A 235 TP-VT-EAPFWFAFQQ-PTPQ-DTNLFYGFGHNPWAPGEFVR-CGPDFEVDPLDHPSAATGVADRRQMDRLSGWLRDHLP 309 (397)
T ss_dssp SC-CS-CCCEEEEECC-CCSS-SCCCEEECCCCSSSSSSEEE-EEECCCCSCCSSGGGCCSSCCHHHHHHHHHHHHHHCT
T ss_pred Cc-cc-CCCEEEEecC-CCCc-ccceEEECCCCCCCCCceEE-EEecCCCCCcCCCccccCCCCHHHHHHHHHHHHHhCC
Confidence 31 11 2222222110 0000 0012355566555 454 454432 11111223455677888999999999999
Q ss_pred ccCcccccceeeeeecc--cCCCCCceeccCCC----CCcEEEEecCCCccchhhHHHHHHHHHHHhcCCCCcccCCCCC
Q 014198 347 HLGEEAQVKAEQACFLP--CTDDGVPVIGELPG----IKGCYVGTGHNCWGILNGPATGAALAELVMDGCASIVDLSRFS 420 (429)
Q Consensus 347 ~l~~~~~~~~~~~g~r~--~t~d~~p~ig~~~~----~~~~~~~~G~~~~G~~~a~~~a~~la~~i~~g~~~~~~~~~~~ 420 (429)
.+.. .+.+.|.|+++ .|+|+.|+||++|+ .+|+|+++| |+|++++|++|++++++|++ ++.+.|++.|+
T Consensus 310 ~l~~--~~~~~~~g~~~~p~t~D~~p~ig~~~~~~~~~~~l~~a~G--g~G~~~ap~~g~~la~~i~~-~~~~~~~~~f~ 384 (397)
T 2oln_A 310 TVDP--DPVRTSTCLAVLPTDPERQFFLGTARDLMTHGEKLVVYGA--GWAFKFVPLFGRICADLAVE-DSTAYDISRLA 384 (397)
T ss_dssp TBCS--SCSEEEEEEEEEESSTTCCCEEEESTTTSTTGGGEEEEEE--SSCGGGHHHHHHHHHHHHHH-SCCSSCCGGGS
T ss_pred CCCC--CceeEEEEEecCCcCCCCCeEeecCCccccCCCCEEEEeC--cchhhccHHHHHHHHHHHhC-CCCCCCccccc
Confidence 9875 56788999987 99999999999987 799999999 79999999999999999954 45578899999
Q ss_pred CCCcCCC
Q 014198 421 PARFGRP 427 (429)
Q Consensus 421 ~~R~~~~ 427 (429)
++||...
T Consensus 385 ~~Rf~~~ 391 (397)
T 2oln_A 385 PQSALLE 391 (397)
T ss_dssp CCC----
T ss_pred cChhhhh
Confidence 9999753
No 11
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=100.00 E-value=7.6e-37 Score=288.76 Aligned_cols=335 Identities=15% Similarity=0.124 Sum_probs=247.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC-CccccccccCCeeeeccCCCC--cchhhhHHHHHHHHHHHHHhC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS-VACAASGKAGGFLALDWCDGG--PLSSLARASFNLHRSLAEELN 128 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~-~~~~~s~~~~g~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~ 128 (429)
.++||+|||||++|+++|++|+++|++|+||||+. ++.++|+.+.|+++..+.... ....+...+.+.|.++..+.+
T Consensus 3 ~~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (369)
T 3dme_A 3 TDIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCAARG 82 (369)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSCSTTSSSCCEECCCCSSCTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCccCcCCccccccCccCCCCCHhHHHHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999999999999995 888999999999987654432 245677788888888888775
Q ss_pred CCCCcCeeeeeeeEEeecccccCCC-CCcccc--CCCC-CCCCCCCCCC---C--Ccc--CccccceeEehHHHHHHHHH
Q 014198 129 GPDNYGYRALTTLSLTVTESQQSGS-KPSNKA--NSLI-PSWVDGPARS---P--TTI--GSTQTTAQVHPQLFTKTLLN 197 (429)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~-~~~~~~~~~~---~--~~~--g~~~~~~~~~~~~l~~~l~~ 197 (429)
. .+...+.+.+.......... ...... .+.. .++++..... + ... .+.+..+.+++..+++.|.+
T Consensus 83 ~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~ 158 (369)
T 3dme_A 83 V----PHQRLGKLIVATSDAEASQLDSIARRAGANGVDDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAYQG 158 (369)
T ss_dssp C----CEECCCEEEEECSHHHHTTHHHHHHHHHHTTCCCCEEEEHHHHHHHCTTCCCSEEEEETTCEEECHHHHHHHHHH
T ss_pred C----CcccCCEEEEecCHHHHHHHHHHHHHHHHcCCCceeecCHHHHHHhCCCceeeeeeECCCCEEECHHHHHHHHHH
Confidence 5 36677777776654433210 000000 1111 3333322110 0 011 13567889999999999999
Q ss_pred HHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCC--eEEEcCEEEEcCCCCchHHH-hh-hcc----cccccceeeEEE
Q 014198 198 KAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGG--RVVESDAVVLALGPWSGKFE-LL-ASM----FRVSGLKAHSII 268 (429)
Q Consensus 198 ~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g--~~i~ad~vV~a~G~~s~~~~-~~-~~~----~~~~~~~~~~~~ 268 (429)
.+ ++.|+++++++ |++|..+ ++..+.|.+.+| .+++||.||+|+|+|+..+. .+ +.. .++.+.+++++.
T Consensus 159 ~~-~~~Gv~i~~~~~v~~i~~~-~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~~~~~~~~i~p~rG~~~~ 236 (369)
T 3dme_A 159 DA-ESDGAQLVFHTPLIAGRVR-PEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIPRDSIPPEYLCKGSYFT 236 (369)
T ss_dssp HH-HHTTCEEECSCCEEEEEEC-TTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETSCGGGSCCCEEEEEEEEE
T ss_pred HH-HHCCCEEECCCEEEEEEEc-CCceEEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCCCccccceeeecceEEEE
Confidence 99 88899999999 9999987 444345777776 48999999999999999888 55 553 468899999988
Q ss_pred ecCCCCCCCCCceeEeeeccCCCCCCCCCCCceEecCCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcccc
Q 014198 269 LEPKEADAITPHALFLSYYPAQGEGGKPMDPEVYPRPTGEVYLCGMSSEQEVPDDPETVSGDPASIQVLKRVARTVSSHL 348 (429)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l 348 (429)
++.+. ++ ...++.. .... ....++.++.+|.+++ |++.+.. ...+..++.+.++.+++.+.+++|.+
T Consensus 237 ~~~~~--~~-~~~~~~~-p~~~-----~~~~~~~~~~~g~~~i-G~t~e~~---~~~~~~~~~~~~~~l~~~~~~~~P~l 303 (369)
T 3dme_A 237 LAGRA--PF-SRLIYPV-PQHA-----GLGVHLTLDLGGQAKF-GPDTEWI---ATEDYTLDPRRADVFYAAVRSYWPAL 303 (369)
T ss_dssp CSSSC--SC-SSEEEEC-TTCS-----SCCCCEEECTTSCEEE-CCCCEEE---SSCCCCCCGGGGGGHHHHHHTTCTTC
T ss_pred ECCCC--cc-CceeecC-CCCC-----CceEEEeCccCCcEEE-CCCcccc---cccccccCHHHHHHHHHHHHHHCCCC
Confidence 87643 33 2333322 1111 1134566677788765 4443321 12456678888999999999999999
Q ss_pred CcccccceeeeeecccC-----CCCCcee-cc-CCCCCcEEEEecCCCccchhhHHHHHHHHHHH
Q 014198 349 GEEAQVKAEQACFLPCT-----DDGVPVI-GE-LPGIKGCYVGTGHNCWGILNGPATGAALAELV 406 (429)
Q Consensus 349 ~~~~~~~~~~~g~r~~t-----~d~~p~i-g~-~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i 406 (429)
.+ .++.+.|+|+||.+ +|+.|+| |+ .+..+|+|+++|++++|++++|.+|+.++++|
T Consensus 304 ~~-~~v~~~w~G~Rp~~~~~~~~d~~p~i~g~~~~~~~~l~~~~G~~~~G~t~ap~~a~~~a~~i 367 (369)
T 3dme_A 304 PD-GALAPGYTGIRPKISGPHEPAADFAIAGPASHGVAGLVNLYGIESPGLTASLAIAEETLARL 367 (369)
T ss_dssp CT-TCCEEEEEEEEEESSCTTSCCCCCEEECHHHHCCTTEEEEECCCTTHHHHHHHHHHHHHHHH
T ss_pred Ch-hhceecceeccccccCCCCCcCCeEEecccccCCCCEEEEeCCCCchHhccHHHHHHHHHHh
Confidence 88 78889999999986 5788988 88 47779999999999999999999999999998
No 12
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=100.00 E-value=5.9e-36 Score=289.12 Aligned_cols=352 Identities=13% Similarity=0.110 Sum_probs=231.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCCCccccc-cccCC-eeeeccCCCCcch------hhhHHHHHHHH
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSSVACAAS-GKAGG-FLALDWCDGGPLS------SLARASFNLHR 121 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~~~~~~s-~~~~g-~~~~~~~~~~~~~------~l~~~~~~~~~ 121 (429)
...+||+|||||++|+++|++|+++|+ +|+|||+...+++.+ ....+ ++...+ ....+. .+..++.+.|.
T Consensus 4 ~~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~ 82 (438)
T 3dje_A 4 TKSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVPSAISAGNDVNKVISSGQ-YSNNKDEIEVNEILAEEAFNGWK 82 (438)
T ss_dssp CTTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSSCTTCTTCSSCEEECCCC-SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCCCCCccCCCCccEEEecc-CCchhhhcchhHHHHHHHHHHHh
Confidence 346899999999999999999999999 999999998554433 22222 333222 233344 67777777776
Q ss_pred HHHHHhCCCCCcCeeeeeeeEEeecccccC-CCCCccccCCCCC-CCCCCCCC---------CCCcc---C-ccccc-ee
Q 014198 122 SLAEELNGPDNYGYRALTTLSLTVTESQQS-GSKPSNKANSLIP-SWVDGPAR---------SPTTI---G-STQTT-AQ 185 (429)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~---------~~~~~---g-~~~~~-~~ 185 (429)
++. .....+...|.+.+........ +.+......+... ++++.... ..... + +.+.. ++
T Consensus 83 ~~~-----~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~l~~~~~~g~~g~~~~~~~g~ 157 (438)
T 3dje_A 83 NDP-----LFKPYYHDTGLLMSACSQEGLDRLGVRVRPGEDPNLVELTRPEQFRKLAPEGVLQGDFPGWKGYFARSGAGW 157 (438)
T ss_dssp HCT-----TTGGGEECCCEEEEECSHHHHHHHHHHHCGGGCTTCEEECSHHHHHTTSCTTTSCSCCTTCEEEEESSSCEE
T ss_pred hCc-----cccCcEeccceEEEecCcchHHHHHHHHhhcccCCceecCCHHHHHHhCCcccccCCCCCceEEEeCCCCEE
Confidence 541 1244577777777765543322 0000000011111 22211100 01111 2 35667 99
Q ss_pred EehHHHHHHHHHHHHhhcCcEEEEce----EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHHhhhccccccc
Q 014198 186 VHPQLFTKTLLNKAVNDYGLEVVIGK----VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFELLASMFRVSG 261 (429)
Q Consensus 186 ~~~~~l~~~l~~~~~~~~Gv~v~~~~----v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~~~~~~~~~~~ 261 (429)
+++..+++.|.+.+ ++.|++|++++ |++|..+ ++++.+|++.+|.+++||.||+|+|+|+..+..+ ..++.+
T Consensus 158 ~~~~~~~~~L~~~a-~~~Gv~i~~~t~~~~V~~i~~~-~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~~l~~l--~~~~~p 233 (438)
T 3dje_A 158 AHARNALVAAAREA-QRMGVKFVTGTPQGRVVTLIFE-NNDVKGAVTADGKIWRAERTFLCAGASAGQFLDF--KNQLRP 233 (438)
T ss_dssp ECHHHHHHHHHHHH-HHTTCEEEESTTTTCEEEEEEE-TTEEEEEEETTTEEEECSEEEECCGGGGGGTSCC--TTCCEE
T ss_pred ecHHHHHHHHHHHH-HhcCCEEEeCCcCceEEEEEec-CCeEEEEEECCCCEEECCEEEECCCCChhhhcCc--ccceee
Confidence 99999999999999 88899999984 9999887 7788889998888999999999999999988743 234445
Q ss_pred ceeeEEEecCCCC--CCCCCceeEeeeccCCCCCCCCCCCceEecCCCcEEEecc----CCCCC-CC-----CCCC-CCC
Q 014198 262 LKAHSIILEPKEA--DAITPHALFLSYYPAQGEGGKPMDPEVYPRPTGEVYLCGM----SSEQE-VP-----DDPE-TVS 328 (429)
Q Consensus 262 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~g~----~~~~~-~~-----~~~~-~~~ 328 (429)
...++..+..+.. ..+...+++... ....|+-|.+++..++++. ..... .+ ..+. ...
T Consensus 234 ~~~~~~~~~l~~~~~~~~~~~p~~~~~---------~~~~~~~p~~~~~~l~i~~~~~g~~~~~~~~~~~~~~~p~~~~~ 304 (438)
T 3dje_A 234 TAWTLVHIALKPEERALYKNIPVIFNI---------ERGFFFEPDEERGEIKICDEHPGYTNMVQSADGTMMSIPFEKTQ 304 (438)
T ss_dssp EEEEEEEEECCGGGHHHHTTCCEEEET---------TTEEECSCCTTTCEEEEEECCSCEECEEECTTCCEEECCCCCSS
T ss_pred EEEEEEEEEcChHHhhhhcCCCEEEEC---------CCceecCCCCCCCeEEEEeCCCCccCCccCCCcccccCCccccc
Confidence 4444444433220 011223333321 1112322443444333431 11100 00 0000 123
Q ss_pred CCHHHHHHHHHHHHHhccccCcccccceeeeeecccCCCCCceeccCCCCCcEEEEecCCCccchhhHHHHHHHHHHHhc
Q 014198 329 GDPASIQVLKRVARTVSSHLGEEAQVKAEQACFLPCTDDGVPVIGELPGIKGCYVGTGHNCWGILNGPATGAALAELVMD 408 (429)
Q Consensus 329 ~~~~~~~~l~~~~~~~~p~l~~~~~~~~~~~g~r~~t~d~~p~ig~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~~ 408 (429)
.+.+..+.+.+.+.+++|.+.+ .++.+.|.|+|+.|+|+.|+||++|..+|+|+++|++|+||+++|++|+.++++| .
T Consensus 305 ~~~~~~~~l~~~~~~~~P~l~~-~~~~~~~~g~~~~t~D~~piig~~p~~~~l~~a~G~~g~G~~~ap~~g~~la~~i-~ 382 (438)
T 3dje_A 305 IPKEAETRVRALLKETMPQLAD-RPFSFARICWCADTANREFLIDRHPQYHSLVLGCGASGRGFKYLPSIGNLIVDAM-E 382 (438)
T ss_dssp CBHHHHHHHHHHHHHHCGGGTT-CCCSEEEEEEEEECTTSCCEEEECSSCTTEEEEECCTTCCGGGTTTHHHHHHHHH-H
T ss_pred CCHHHHHHHHHHHHHhCccccc-CCcceeeEEEeCcCCCCCeEEeecCCCCCEEEEECCCCcchhhhHHHHHHHHHHH-h
Confidence 4567788999999999999988 8889999999999999999999999999999999999999999999999999999 5
Q ss_pred CCCCcccCCCCCCCC
Q 014198 409 GCASIVDLSRFSPAR 423 (429)
Q Consensus 409 g~~~~~~~~~~~~~R 423 (429)
|+..+...+.|++.|
T Consensus 383 g~~~~~~~~~~~~~~ 397 (438)
T 3dje_A 383 GKVPQKIHELIKWNP 397 (438)
T ss_dssp TCCCHHHHHHHSCCH
T ss_pred CCCChhhccccCCCC
Confidence 665455455565554
No 13
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=100.00 E-value=8.8e-35 Score=301.03 Aligned_cols=351 Identities=18% Similarity=0.245 Sum_probs=248.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCCC--ccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSSV--ACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELN 128 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~~--~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 128 (429)
.++||+|||||++|+++|++|+++|+ +|+|||++.. .+++|+++.|++.... .......+...+.+.|.++.. .+
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~~~~~gss~~~~G~~~~~~-~~~~~~~l~~~s~~~~~~l~~-~~ 80 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLNMPGGSTSHAPGLVFQTN-PSKTMASFAKYTVEKLLSLTE-DG 80 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCTTCCCSGGGTCCCEECCCC-SCHHHHHHHHHHHHHHHHCEE-TT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCCCCCcccceeCCceeecCC-CCHHHHHHHHHHHHHHHHHHh-hC
Confidence 46899999999999999999999998 9999999985 3567778888875432 222345566677777776531 11
Q ss_pred CCCCcCeeeeeeeEEeecccccC-CCCCcc--ccCCCCCCCCCCCCCC--------CCccC--ccccceeEehHHHHHHH
Q 014198 129 GPDNYGYRALTTLSLTVTESQQS-GSKPSN--KANSLIPSWVDGPARS--------PTTIG--STQTTAQVHPQLFTKTL 195 (429)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~--------~~~~g--~~~~~~~~~~~~l~~~l 195 (429)
...+...|.+.+........ +.+... ...+..+++++..... ....+ +.+..++++|..+++.|
T Consensus 81 ---~~~~~~~G~l~~~~~~~~~~~l~~~~~~~~~~G~~~~~l~~~e~~~~~p~l~~~~~~gg~~~~~~g~v~p~~l~~~L 157 (830)
T 1pj5_A 81 ---VSCFNQVGGLEVATTETRLADLKRKLGYAAAWGIEGRLLSPAECQELYPLLDGENILGGLHVPSDGLASAARAVQLL 157 (830)
T ss_dssp ---EESEECCCEEEEESSHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHCTTSCGGGCCEEEEETTCEEECHHHHHHHH
T ss_pred ---CCCeeecCcEEEEeCHHHHHHHHHHHHHHHHcCCCeEEECHHHHHHhCccCCccceEEEEEECCCceEcHHHHHHHH
Confidence 23477778887776544321 000000 0012233343332111 01111 35678999999999999
Q ss_pred HHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHH-hhhcccccccceeeEEEecCCC
Q 014198 196 LNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFE-LLASMFRVSGLKAHSIILEPKE 273 (429)
Q Consensus 196 ~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~-~~~~~~~~~~~~~~~~~~~~~~ 273 (429)
.+.+ ++.|+++++++ |++|..+ ++++++|.+.+| +++||.||+|+|+|+..+. .++..+|+.+.+++++.+.+..
T Consensus 158 ~~~a-~~~Gv~i~~~t~V~~i~~~-~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~l~~~~g~~~pl~p~~g~~~~~~~~~ 234 (830)
T 1pj5_A 158 IKRT-ESAGVTYRGSTTVTGIEQS-GGRVTGVQTADG-VIPADIVVSCAGFWGAKIGAMIGMAVPLLPLAHQYVKTTPVP 234 (830)
T ss_dssp HHHH-HHTTCEEECSCCEEEEEEE-TTEEEEEEETTE-EEECSEEEECCGGGHHHHHHTTTCCCCCEEEEEEEEEESCCG
T ss_pred HHHH-HHcCCEEECCceEEEEEEe-CCEEEEEEECCc-EEECCEEEECCccchHHHHHHhCCCccceeceeEEEEEecCc
Confidence 9999 88899999999 9999987 677777888655 8999999999999998887 6777889999999998886543
Q ss_pred CCC-------CCCceeEeeeccCCCCCCCCCCCceEecCCCcEEEeccCCCCC-------CCC----------CCCCCCC
Q 014198 274 ADA-------ITPHALFLSYYPAQGEGGKPMDPEVYPRPTGEVYLCGMSSEQE-------VPD----------DPETVSG 329 (429)
Q Consensus 274 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~g~~~~~~-------~~~----------~~~~~~~ 329 (429)
... ....+++... ....|+.|..+ .+ ++|.+.... ... .+.+...
T Consensus 235 ~~~~~~~~~~~~~~pv~~~~---------~~~~y~r~~~~-~l-~iG~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 303 (830)
T 1pj5_A 235 AQQGRNDQPNGARLPILRHQ---------DQDLYYREHGD-RY-GIGSYAHRPMPVDVDTLGAYAPETVSEHHMPSRLDF 303 (830)
T ss_dssp GGTTTSCTTTCCCSCEEEEG---------GGTEEEEEETT-EE-EEEECCSCCCBCCGGGSCCCCGGGCBTTBSTTEECC
T ss_pred ccccccccccCCCCCeEEcC---------CCCEEEEEeCC-eE-EEeccCCCCcccCcccccccccccccccccccccCC
Confidence 100 0111222211 01123334433 34 445443211 000 0122346
Q ss_pred CHHHHHHHHHHHHHhccccCcccccceeeeeecccCCCCCceeccCCCCCcEEEEecCCCccchhhHHHHHHHHHHHhcC
Q 014198 330 DPASIQVLKRVARTVSSHLGEEAQVKAEQACFLPCTDDGVPVIGELPGIKGCYVGTGHNCWGILNGPATGAALAELVMDG 409 (429)
Q Consensus 330 ~~~~~~~l~~~~~~~~p~l~~~~~~~~~~~g~r~~t~d~~p~ig~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~~g 409 (429)
+.+.++.+++.+.+++|.+.+ .++.+.|+|+||+|+|+.|+||++|+.+|+|+++|+ |++++|++|++++++|.++
T Consensus 304 ~~~~~~~l~~~~~~~~P~l~~-~~i~~~w~G~r~~t~D~~PiIG~~p~~~gl~va~G~---G~~~ap~~g~~la~li~~~ 379 (830)
T 1pj5_A 304 TLEDFLPAWEATKQLLPALAD-SEIEDGFNGIFSFTPDGGPLLGESKELDGFYVAEAV---WVTHSAGVAKAMAELLTTG 379 (830)
T ss_dssp CHHHHHHHHHHHHHHCGGGGG-SCEEEEEEEEEEECTTSCCEEEECSSSBTEEEEESC---CGGGHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHhCccccc-cCcceEEEeecccCCCCCeeeccCCCCCCEEEEECc---hHHhhHHHHHHHHHHHhCC
Confidence 778889999999999999988 788999999999999999999999989999999987 7999999999999999655
Q ss_pred CCCcccCCCCCCCCcCC
Q 014198 410 CASIVDLSRFSPARFGR 426 (429)
Q Consensus 410 ~~~~~~~~~~~~~R~~~ 426 (429)
. ++.|+..|+|.||..
T Consensus 380 ~-~~~dl~~~~~~Rf~~ 395 (830)
T 1pj5_A 380 R-SETDLGECDITRFED 395 (830)
T ss_dssp S-CSSCCTTTBGGGCCG
T ss_pred C-CCccccccChhhhcc
Confidence 4 467899999999964
No 14
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=100.00 E-value=2e-34 Score=271.42 Aligned_cols=315 Identities=19% Similarity=0.185 Sum_probs=218.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccc-----cccccCCeeeeccC--CCCcchhhhHHHHHHHHHH
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACA-----ASGKAGGFLALDWC--DGGPLSSLARASFNLHRSL 123 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~-----~s~~~~g~~~~~~~--~~~~~~~l~~~~~~~~~~~ 123 (429)
..++||+|||||++|+++|++|+++|++|+|||+..++.+ +|..+++.+.+... .......+..++++.|.++
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g~s~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDVSSQTFASPWAGANWTPFMTLTDGPRQAKWEESTFKKWVEL 83 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCTTCTTSSGGGCCCBCCCCSCTTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCcCCcCcccCcccccccCcccCCCchHHHHHHHHHHHHHHHh
Confidence 4468999999999999999999999999999999987665 34555565554322 2233455666677777666
Q ss_pred HHHhCCCCCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhc
Q 014198 124 AEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDY 203 (429)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~ 203 (429)
..+ ..++...+.+.+...+.. ...++..+ .+..+++++.........+.....++++|..+++.|.+.+ ++.
T Consensus 84 ~~~-----~~g~~~~~~~~~~~~~~~-~~~~~~~~-~g~~~~~l~~~~~p~~~~g~~~~~~~v~p~~~~~~l~~~~-~~~ 155 (363)
T 1c0p_A 84 VPT-----GHAMWLKGTRRFAQNEDG-LLGHWYKD-ITPNYRPLPSSECPPGAIGVTYDTLSVHAPKYCQYLAREL-QKL 155 (363)
T ss_dssp TTT-----TSSEEEEEEEEEESSGGG-GGGGTTTT-TSTTCEECCGGGSSTTCEEEEEEEEECCHHHHHHHHHHHH-HHT
T ss_pred Ccc-----cCCeEEECCEEEEecCcc-chhHHHHH-hCCCcEECCHHHCCCceEEEEEecceecHHHHHHHHHHHH-HHC
Confidence 321 123444444444432211 11111111 2233344444332111112222678899999999999999 888
Q ss_pred CcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHHhhhcccccccceeeEEEecCCCCCCCCCcee
Q 014198 204 GLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFELLASMFRVSGLKAHSIILEPKEADAITPHAL 282 (429)
Q Consensus 204 Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (429)
|++++. + |+++..+ . + +||.||+|+|+|+..+... ...++.+.+++++.++.+. ++. .
T Consensus 156 G~~i~~-~~v~~l~~~--------~-----~-~a~~VV~A~G~~s~~l~~~-~~~~~~p~rg~~~~~~~~~--~~~-~-- 214 (363)
T 1c0p_A 156 GATFER-RTVTSLEQA--------F-----D-GADLVVNATGLGAKSIAGI-DDQAAEPIRGQTVLVKSPC--KRC-T-- 214 (363)
T ss_dssp TCEEEE-CCCSBGGGT--------C-----S-SCSEEEECCGGGGGTSBTT-CCTTEEEEEEEEEEEECCC--CCC-E--
T ss_pred CCEEEE-EEcccHhhc--------C-----c-CCCEEEECCCcchhhccCc-ccCCccccCCeEEEEeCCc--ccc-e--
Confidence 999999 8 9888532 0 1 7999999999999887632 4678999999999887654 221 1
Q ss_pred EeeeccCCCCCCCCCCCceEecCCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcccc------Ccccccce
Q 014198 283 FLSYYPAQGEGGKPMDPEVYPRPTGEVYLCGMSSEQEVPDDPETVSGDPASIQVLKRVARTVSSHL------GEEAQVKA 356 (429)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l------~~~~~~~~ 356 (429)
+... .+ ....|+.|+.+|.+++ |++.+.. ..+..++.+.++.+++.+.+++|.+ .+ .++.+
T Consensus 215 ~~~~--~~-----~~~~y~~p~~~g~~~i-G~t~~~~----~~~~~~~~~~~~~l~~~~~~~~P~l~~~~~~~~-~~i~~ 281 (363)
T 1c0p_A 215 MDSS--DP-----ASPAYIIPRPGGEVIC-GGTYGVG----DWDLSVNPETVQRILKHCLRLDPTISSDGTIEG-IEVLR 281 (363)
T ss_dssp EECS--CT-----TCCEEEEEETTTEEEE-ECCCEET----CCCCSCCHHHHHHHHHHHHHHCGGGSSSSSGGG-CEEEE
T ss_pred Eeec--cC-----CCcEEEEEcCCCEEEE-EeeeccC----CCCCCCCHHHHHHHHHHHHHhCccccCCccccc-ceEee
Confidence 1100 01 1236788888887765 5454321 2345677888999999999999988 44 67889
Q ss_pred eeeeecccCCCCCceeccC---------------------CCC--CcEEEEecCCCccchhhHHHHHHHHHHHh
Q 014198 357 EQACFLPCTDDGVPVIGEL---------------------PGI--KGCYVGTGHNCWGILNGPATGAALAELVM 407 (429)
Q Consensus 357 ~~~g~r~~t~d~~p~ig~~---------------------~~~--~~~~~~~G~~~~G~~~a~~~a~~la~~i~ 407 (429)
.|+|+||.++|+.|++|+. |+. +|+|+++|++|+||+++|++|+.++++|.
T Consensus 282 ~w~G~rp~t~d~~piig~~~~~~~~~~~~~~d~~~~~g~~p~~~~~~~~~a~G~~g~G~~~a~~~g~~~a~li~ 355 (363)
T 1c0p_A 282 HNVGLRPARRGGPRVEAERIVLPLDRTKSPLSLGRGSARAAKEKEVTLVHAYGFSSAGYQQSWGAAEDVAQLVD 355 (363)
T ss_dssp EEEEEEEEETTSCEEEEEEEEESCCTTTCTTCSSCTTCCCSCCEEEEEEEEECCTTCHHHHHHHHHHHHHHHHH
T ss_pred ceEEECCCCCCCceeEEEecccccccccCccccccccccccccccceEEEecCCCCcchheeccHHHHHHHHHH
Confidence 9999999999999998873 334 79999999999999999999999999994
No 15
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=100.00 E-value=9.5e-35 Score=272.41 Aligned_cols=331 Identities=15% Similarity=0.152 Sum_probs=221.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC------CcEEEEcCCCCccccccccCCeeeeccCCC--CcchhhhHHHHHHHHHHHH
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKG------AAVTLIEKSSVACAASGKAGGFLALDWCDG--GPLSSLARASFNLHRSLAE 125 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G------~~V~lie~~~~~~~~s~~~~g~~~~~~~~~--~~~~~l~~~~~~~~~~~~~ 125 (429)
.||+|||||++|+++|++|+++| ++|+|||+..++.++|..++|++.+..... .....+..++++.|.++..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~aS~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQPYLSDPNNPQEADWSQQTFDYLLSHVH 80 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGSGGGTCCCBCCCCSSCCSCTHHHHHHHHHHHHHHTTTT
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCCccccCcceeecccCCCchHHHHHHHHHHHHHHHHHhh
Confidence 38999999999999999999998 999999999988999999999998743222 1233444445555544332
Q ss_pred HhCCCCCcCe-eeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCC--CCc-cCccccceeEehHHHHHHHHHHHHh
Q 014198 126 ELNGPDNYGY-RALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARS--PTT-IGSTQTTAQVHPQLFTKTLLNKAVN 201 (429)
Q Consensus 126 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~g~~~~~~~~~~~~l~~~l~~~~~~ 201 (429)
+... ..+.+ ...+.+.+... ... ....+ ....+++++..+.. +.. .+.....++++|..+++.|.+.+ +
T Consensus 81 ~~~~-~~~~~~~~~g~~~~~~~-~~~---~~~~~-~~~~~~~l~~~e~~~~p~~~~~~~~~~~~v~p~~~~~~l~~~~-~ 153 (351)
T 3g3e_A 81 SPNA-ENLGLFLISGYNLFHEA-IPD---PSWKD-TVLGFRKLTPRELDMFPDYGYGWFHTSLILEGKNYLQWLTERL-T 153 (351)
T ss_dssp STTH-HHHTEEEEEEEEEESSC-CCC---CGGGG-TSEEEEECCHHHHTTCTTCCEEEEEEEEEECHHHHHHHHHHHH-H
T ss_pred ccCC-CCccEEEEEEEEEecCC-ccc---cCHHH-hCCCceECCHHHhccCCCCceEEEecceEEcHHHHHHHHHHHH-H
Confidence 2110 02334 34444433322 211 11111 11222333322211 111 12222368999999999999999 8
Q ss_pred hcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHHhhhcccccccceeeEEEecCCCCCCCCCc
Q 014198 202 DYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFELLASMFRVSGLKAHSIILEPKEADAITPH 280 (429)
Q Consensus 202 ~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (429)
+.|+++++ + |++++.. + .++||.||+|+|+|+..+. ...++.+.+++++.++++. + ..
T Consensus 154 ~~Gv~i~~-~~V~~i~~~-~------------~~~a~~VV~A~G~~s~~l~---~~~~l~p~rg~~~~~~~~~---~-~~ 212 (351)
T 3g3e_A 154 ERGVKFFQ-RKVESFEEV-A------------REGADVIVNCTGVWAGALQ---RDPLLQPGRGQIMKVDAPW---M-KH 212 (351)
T ss_dssp HTTCEEEE-CCCCCHHHH-H------------HTTCSEEEECCGGGGGGTS---CCTTCEEEEEEEEEEECTT---C-CS
T ss_pred HCCCEEEE-EEeCCHHHh-h------------cCCCCEEEECCCcChHhhc---CCCceeecCCcEEEEeCCC---c-ce
Confidence 88999998 8 8887543 1 1679999999999998876 2378999999999988642 2 33
Q ss_pred eeEeeeccCCCCCCCCCCCceEecCCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhccccCcccccceeeee
Q 014198 281 ALFLSYYPAQGEGGKPMDPEVYPRPTGEVYLCGMSSEQEVPDDPETVSGDPASIQVLKRVARTVSSHLGEEAQVKAEQAC 360 (429)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~~~~~~~~~g 360 (429)
.++....... .....|+.|+.+ .+++ |++.+.. ..+..++.+.++.+++.+.+++|.+.+ .++.+.|+|
T Consensus 213 ~~~~~~~~~~----~~~~~y~~p~~~-~~~i-Gg~~~~~----~~~~~~~~~~~~~l~~~~~~~~P~l~~-~~i~~~w~G 281 (351)
T 3g3e_A 213 FILTHDPERG----IYNSPYIIPGTQ-TVTL-GGIFQLG----NWSELNNIQDHNTIWEGCCRLEPTLKN-ARIIGERTG 281 (351)
T ss_dssp EEEECCTTTC----TTCSCEEEECSS-CEEE-ECCCEET----CCCCSCCHHHHHHHHHHHHHHCGGGGG-CEEEEEEEE
T ss_pred EEEeccccCC----CCceeEEEeCCC-cEEE-eeeeecC----CCCCCCCHHHHHHHHHHHHHhCCCccC-CcEeeeeEe
Confidence 3332210000 012357778776 5655 5454321 234567888999999999999999987 789999999
Q ss_pred ecccCCCCCce----eccCCCCCcEEEEecCCCccchhhHHHHHHHHHHHhcCCCCcccCCCCCCCCcC
Q 014198 361 FLPCTDDGVPV----IGELPGIKGCYVGTGHNCWGILNGPATGAALAELVMDGCASIVDLSRFSPARFG 425 (429)
Q Consensus 361 ~r~~t~d~~p~----ig~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~~g~~~~~~~~~~~~~R~~ 425 (429)
+||+++| .|+ ||+.|..+|+|+++|++|+|++++|++|+.++++|. +......+...++.|+.
T Consensus 282 ~r~~t~D-~p~~~~~ig~~~~~~~~~~~~G~~g~G~~~ap~~g~~la~li~-~~~~~~~~~~~~~~~~~ 348 (351)
T 3g3e_A 282 FRPVRPQ-IRLEREQLRTGPSNTEVIHNYGHGGYGLTIHWGCALEAAKLFG-RILEEKKLSRMPPSHLL 348 (351)
T ss_dssp EEEECSS-CEEEEEEECCSSSCEEEEEEECCTTCHHHHHHHHHHHHHHHHH-HHHHHTTCC--------
T ss_pred eCCCCCC-ccceeeeccCCCCCCeEEEEeCCCcchHhhhHHHHHHHHHHHH-HHHHhcccccCCccccc
Confidence 9999999 874 777787899999999999999999999999999994 33333345555555554
No 16
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=100.00 E-value=3.8e-33 Score=266.19 Aligned_cols=327 Identities=13% Similarity=0.056 Sum_probs=217.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC--CCcEEEEcCCCCccccccccCC-ee-eeccCCCCcchhhhHHHHHHHHHHHHHh
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKK--GAAVTLIEKSSVACAASGKAGG-FL-ALDWCDGGPLSSLARASFNLHRSLAEEL 127 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~--G~~V~lie~~~~~~~~s~~~~g-~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 127 (429)
..+||+|||||++|+++|++|+++ |++|+|||+..++.++|+.++| .+ .. +........+..++.++|.+ ..
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~-~~~~~~~~~l~~~~~~~~~~---~~ 110 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTA-QDIPAGQEAQAEWTREQLLG---AL 110 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECG-GGCCTTCHHHHHHHHHHHHT---GG
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeec-ccCCchHHHHHHHHHHHHHH---Hh
Confidence 358999999999999999999999 9999999999888888888777 45 22 22222256777777777765 22
Q ss_pred CCCCCcCeeeeeeeEEeecccccCCCCCccc-cCCCCCCCCCCC-CCCCCccC-ccccceeEehHHHHHHHHHHHHhhcC
Q 014198 128 NGPDNYGYRALTTLSLTVTESQQSGSKPSNK-ANSLIPSWVDGP-ARSPTTIG-STQTTAQVHPQLFTKTLLNKAVNDYG 204 (429)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~g-~~~~~~~~~~~~l~~~l~~~~~~~~G 204 (429)
+....+.+...+.+.+........ .... ........+... .......+ +.+..+++++..+++.|.+.+ ++.|
T Consensus 111 ~~~~~~~~~~~g~l~~~~~~~~~g---~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~-~~~G 186 (405)
T 3c4n_A 111 GSGKTLEVEDRPLLHLLPAGEGSG---LTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQA-IGQG 186 (405)
T ss_dssp GSSCCCCEEECCEEEEESSCCSSS---CEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHH-HTTT
T ss_pred CCCCCCcEEeeCeEEehhhHhHCC---CCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHH-HHCC
Confidence 210024566666665332211100 0000 000000000000 00000011 356788999999999999999 8889
Q ss_pred cEEEEce-EE---------EEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHH--hhhcccccccceeeEEEecCC
Q 014198 205 LEVVIGK-VE---------RVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFE--LLASMFRVSGLKAHSIILEPK 272 (429)
Q Consensus 205 v~v~~~~-v~---------~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~--~~~~~~~~~~~~~~~~~~~~~ 272 (429)
+++++++ |+ ++..+ ++++ .|.+.++ +++||.||+|+|+|+..+. .++...++.+.+++.+.++.+
T Consensus 187 v~i~~~~~v~~~~g~~~~~~i~~~-~~~v-~v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~g~~~~~~~~~g~~~~~~~~ 263 (405)
T 3c4n_A 187 AGLLLNTRAELVPGGVRLHRLTVT-NTHQ-IVVHETR-QIRAGVIIVAAGAAGPALVEQGLGLHTRHGRAYRQFPRLDLL 263 (405)
T ss_dssp CEEECSCEEEEETTEEEEECBCC---------CBCCE-EEEEEEEEECCGGGHHHHHHHHHCCCCCCEEEEEECCEECSC
T ss_pred CEEEcCCEEEeccccccccceEee-CCeE-EEEECCc-EEECCEEEECCCccHHHHHHHhcCCCCCcccceeEEEEECCC
Confidence 9999999 99 88766 5555 5766555 8999999999999997665 466777888888988777654
Q ss_pred CCCCCCCceeEeeeccCCCCCCCCCCCceEecCCCcEEEeccCCC--C-CCCCC-----CCCCCCCHHHHHHHHHHHHHh
Q 014198 273 EADAITPHALFLSYYPAQGEGGKPMDPEVYPRPTGEVYLCGMSSE--Q-EVPDD-----PETVSGDPASIQVLKRVARTV 344 (429)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~g~~~~--~-~~~~~-----~~~~~~~~~~~~~l~~~~~~~ 344 (429)
. ......+ .. ...|+.|..+|.+ ++|++.. . ..... ..+...+.+.++.+.+.+ ++
T Consensus 264 ~--~~~~~~~-~~-----------~~~y~~p~~~g~~-~~G~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~ 327 (405)
T 3c4n_A 264 S--GAQTPVL-RA-----------SGLTLRPQNGGYT-LVPAIHHRDPHGYHPAGGSLTGVPTGLRRELLEDLVGLM-DA 327 (405)
T ss_dssp C--CTTCCEE-EE-----------TTEEEEEETTEEE-EECCCCSCBCSSCCCCCCCBTTBCCSSCHHHHHHHHHHT-TT
T ss_pred C--ccCCCeE-EC-----------CcEEEEEcCCCeE-EEeccccccccCcCcccccccccccCCCHHHHHHHHHHH-Hh
Confidence 3 2212222 21 1357778888755 5666532 1 11110 112334567777777654 88
Q ss_pred ccccCcccc---------cceeeeeecccCCCCCceeccCCCCCcEEEEecCCCccchhhHHHHHHHHHHHhcC
Q 014198 345 SSHLGEEAQ---------VKAEQACFLPCTDDGVPVIGELPGIKGCYVGTGHNCWGILNGPATGAALAELVMDG 409 (429)
Q Consensus 345 ~p~l~~~~~---------~~~~~~g~r~~t~d~~p~ig~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~~g 409 (429)
+|.+.+ .. +.+.|+|+||.++|+.|+||+++ +|+|+++|++|+ ++++|++|+.++++|.++
T Consensus 328 ~P~l~~-~~~~~~r~~~~i~~~w~G~r~~t~D~~P~ig~~~--~gl~~a~G~~g~-~~~ap~~a~~la~~i~~~ 397 (405)
T 3c4n_A 328 VPALAG-EGLELGRSSADVPGAWLALPGGRPDAPPQAEELA--PGLHLLLGGPLA-DTLGLAAAHELAQRVSAS 397 (405)
T ss_dssp CGGGGS-SCBCCCSSGGGSCEEEEEEGGGCTTCCCEEEEEE--TTEEEEECCTTH-HHHHHHHHHHHHHHHHHH
T ss_pred CCCccc-cCccccccccceeeEEEeecCcCCCCCCEecccC--CCeEEEEccCcH-HHHHHHHHHHHHHHHhCc
Confidence 998876 43 78899999999999999999998 999999999887 499999999999999643
No 17
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.97 E-value=2.6e-29 Score=245.77 Aligned_cols=330 Identities=17% Similarity=0.103 Sum_probs=227.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCC-cchhhhHHHHHHHHHHHHHhCCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGG-PLSSLARASFNLHRSLAEELNGPD 131 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~ 131 (429)
.+||+|||||++|+++|++|+++|++|+||||.++++++|++++|+++.+..... ....+..+++..+..+.+....
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~~gtS~~s~gli~~g~~~~~~~~~~l~~~~~~~~~~l~~~~~~-- 80 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPH-- 80 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSGGGSSCCEECCCGGGGGGTCHHHHHHHHHHHHHHHHHCTT--
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCCCCccccccccccccchhhhhchHHHHHHHHHHHHHHHHhCCc--
Confidence 5899999999999999999999999999999999999999999999987654332 2345666777777666544322
Q ss_pred CcCeeeeeeeEEeecccccC------CCCCccccCCCCCCCCCCCCCC---------CCc-cCccccceeEehHHHHHHH
Q 014198 132 NYGYRALTTLSLTVTESQQS------GSKPSNKANSLIPSWVDGPARS---------PTT-IGSTQTTAQVHPQLFTKTL 195 (429)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---------~~~-~g~~~~~~~~~~~~l~~~l 195 (429)
..+..+....... .... ....+.. . ...++++..... ... .+....++++++..++..|
T Consensus 81 --l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~-~~~~~l~~~~~~~~~~~P~l~~~~~~~~~~~~g~v~~~~l~~~l 155 (501)
T 2qcu_A 81 --IAFPMRFRLPHRP-HLRPAWMIRIGLFMYDH-L-GKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLAN 155 (501)
T ss_dssp --TEEEEEEEEECCT-TTSCHHHHHHHHHHHHS-S-SCCSSSCCCEEEECCTTSSBCTTCCEEEEEEEEEECHHHHHHHH
T ss_pred --cccccCeEeccCc-ccchHHHHHHHHHHHHh-c-CCcEEECHHHHHHhhcCCCcchhceEEEEeeCCEEcHHHHHHHH
Confidence 1223322211111 1000 0000000 0 033444433211 111 1233457889999999999
Q ss_pred HHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEe---CCe--EEEcCEEEEcCCCCchHHHh--hhc--ccccccceee
Q 014198 196 LNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIE---GGR--VVESDAVVLALGPWSGKFEL--LAS--MFRVSGLKAH 265 (429)
Q Consensus 196 ~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~---~g~--~i~ad~vV~a~G~~s~~~~~--~~~--~~~~~~~~~~ 265 (429)
.+.+ .+.|+++++++ |+++..+ + .+++|.+. +|+ +++||.||+|+|+|+..+.. ++. ..++.+.+++
T Consensus 156 ~~~a-~~~Gv~i~~~~~V~~l~~~-~-~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~~~~~~i~p~rG~ 232 (501)
T 2qcu_A 156 AQMV-VRKGGEVLTRTRATSARRE-N-GLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPSPYGIRLIKGS 232 (501)
T ss_dssp HHHH-HHTTCEEECSEEEEEEEEE-T-TEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCCCCSSCBCCEEEE
T ss_pred HHHH-HHcCCEEEcCcEEEEEEEe-C-CEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccCCcccccccceeE
Confidence 9999 88899999999 9999986 4 56677774 454 79999999999999998874 543 3679999999
Q ss_pred EEEecCCCCCCCCCceeEeeeccCCCCCCCCCCCceEecCCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc
Q 014198 266 SIILEPKEADAITPHALFLSYYPAQGEGGKPMDPEVYPRPTGEVYLCGMSSEQEVPDDPETVSGDPASIQVLKRVARTVS 345 (429)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 345 (429)
++.++... +. ....+.. ..++ ...++.|..+|.+ ++|+++... ..++.+..++++.++.+++.+.+++
T Consensus 233 ~~~~~~~~--~~-~~~~~~~--~~dg-----~~~~~~P~~~g~~-~iG~t~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~ 300 (501)
T 2qcu_A 233 HIVVPRVH--TQ-KQAYILQ--NEDK-----RIVFVIPWMDEFS-IIGTTDVEY-KGDPKAVKIEESEINYLLNVYNTHF 300 (501)
T ss_dssp EEEEECSS--SC-SCEEEEE--CTTS-----CEEEEEEETTTEE-EEECCCEEC-CSCGGGCCCCHHHHHHHHHHHHHHB
T ss_pred EEEECCCC--CC-ceEEEee--cCCC-----CEEEEEEcCCCcE-EEcCCCCCC-CCCcCCCCCCHHHHHHHHHHHHHhc
Confidence 98887432 22 2233332 1122 1246778877755 467665421 1123356678899999999999999
Q ss_pred c-ccCcccccceeeeeecccCCCCCceeccCCC-----------CCcEEEEecCCCccchhhHHHHHHHHHHHhc
Q 014198 346 S-HLGEEAQVKAEQACFLPCTDDGVPVIGELPG-----------IKGCYVGTGHNCWGILNGPATGAALAELVMD 408 (429)
Q Consensus 346 p-~l~~~~~~~~~~~g~r~~t~d~~p~ig~~~~-----------~~~~~~~~G~~~~G~~~a~~~a~~la~~i~~ 408 (429)
| .+.. .++...|+|+||.++|+.|++++++. .+|++.++|. |++.++.+|+.+++.+.+
T Consensus 301 p~~l~~-~~v~~~~aG~Rp~~~d~~p~~~~~~~~~~i~~~~~~~~~gl~~i~Gg---~~t~~~~~Ae~~~~~~~~ 371 (501)
T 2qcu_A 301 KKQLSR-DDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGG---KLTTYRKLAEHALEKLTP 371 (501)
T ss_dssp SSCCCG-GGCCEEEEEEECCBCCCCSSGGGSCCCCEEEEEEETTEEEEEEEECC---CGGGHHHHHHHHHHHHGG
T ss_pred CCCCCc-ccEEEEEEEEeeecCCCCCccccCcCceEEEecccCCCCCeEEEeCc---cccchHHHHHHHHHHHHH
Confidence 9 7887 78899999999999999998887652 1344444543 799999999999999943
No 18
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.97 E-value=4.5e-28 Score=239.78 Aligned_cols=334 Identities=14% Similarity=0.097 Sum_probs=218.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCc-chhhhHHHHHHHHHHHHHhCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGP-LSSLARASFNLHRSLAEELNGP 130 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~ 130 (429)
..+||+|||||++|+++|+.|+++|++|+|||++++++|+|++++|+++.+..+... ...+..++...+..+... ..
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~GtS~~s~gli~~g~ryl~~~~~~l~~~~~~e~~~l~~~-~~- 108 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEGTSSRSTKLVHGGIRYLKTFDVEVVADTVGERAVVQGI-AP- 108 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSGGGSSCSEECCCGGGGGGTCHHHHHHHHHHHHHHHHH-CT-
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccccccccccchhhccChHHHHHHHHHHHHHHHh-Cc-
Confidence 368999999999999999999999999999999999999999999999876543222 123444444444333322 21
Q ss_pred CCcCeeeeeeeEEeecccc---cC---------CCCCcccc--CCCCCCCCCCCCCC--------CCccC-ccccceeEe
Q 014198 131 DNYGYRALTTLSLTVTESQ---QS---------GSKPSNKA--NSLIPSWVDGPARS--------PTTIG-STQTTAQVH 187 (429)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~---~~---------~~~~~~~~--~~~~~~~~~~~~~~--------~~~~g-~~~~~~~~~ 187 (429)
. .....+.+........ .. ........ .....++++..... ....+ ....+++++
T Consensus 109 -~-~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~e~~~~~P~l~~~~~~gg~~~~dg~v~ 186 (571)
T 2rgh_A 109 -H-IPKPDPMLLPIYEDEGATTFNMFSVKVAMDLYDKLANVTGTKYENYTLTPEEVLEREPFLKKEGLKGAGVYLDFRNN 186 (571)
T ss_dssp -T-SSEECCEEEEEESSSSSCSCCHHHHHHHHHHHHHHHTCSSSTTCCEEECHHHHHHHCTTSCCTTEEEEEEECCEECC
T ss_pred -c-cccccCceEEeecccccccccHHHHHHHHHHHHHHhhhhccCCCcEEECHHHHHHhCcCCchhhceEEEEecCCeEc
Confidence 1 1222333222121110 00 00000000 11223333322110 11111 223357899
Q ss_pred hHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEe---CC--eEEEcCEEEEcCCCCchHHH-hhhcc---c
Q 014198 188 PQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIE---GG--RVVESDAVVLALGPWSGKFE-LLASM---F 257 (429)
Q Consensus 188 ~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~---~g--~~i~ad~vV~a~G~~s~~~~-~~~~~---~ 257 (429)
+..++..+.+.+ .+.|++|++++ |+++..+ ++++++|++. ++ .+++||.||+|+|+|+..+. +.+.. .
T Consensus 187 ~~~l~~~l~~~a-~~~Ga~i~~~t~V~~l~~~-~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~~g~~~~~~ 264 (571)
T 2rgh_A 187 DARLVIDNIKKA-AEDGAYLVSKMKAVGFLYE-GDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNFTRPVSP 264 (571)
T ss_dssp HHHHHHHHHHHH-HHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTTCCSSCCCC
T ss_pred hHHHHHHHHHHH-HHcCCeEEeccEEEEEEEe-CCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHhhccCccCc
Confidence 999999999999 88999999999 9999987 6777788764 23 37999999999999999988 44432 5
Q ss_pred ccccceeeEEEecCCCCCCCCCceeEeeeccCCCCCCCCCCCceEecCCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHH
Q 014198 258 RVSGLKAHSIILEPKEADAITPHALFLSYYPAQGEGGKPMDPEVYPRPTGEVYLCGMSSEQEVPDDPETVSGDPASIQVL 337 (429)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l 337 (429)
++.+.+++++.++.... +. ...++......++ ...++.|.. +.+ ++|++.... ..+..+..++++.++.+
T Consensus 265 ~i~p~rG~~l~~~~~~~-~~-~~~~~~~~~~~dg-----r~~~~~P~~-~~~-~iG~t~~~~-~~~~~~~~~~~~~~~~l 334 (571)
T 2rgh_A 265 KMRPTKGIHLVVDAKKL-PV-PQPTYFDTGKQDG-----RMVFAIPRE-NKT-YFGTTDTDY-QGDFTDPKVTQEDVDYL 334 (571)
T ss_dssp CBCCEEEEEEEEEGGGS-CC-SSCEEEECSSSSS-----CEEEEEEET-TEE-EECCCCEEC-CSCSSSCCCCHHHHHHH
T ss_pred eeeccceEEEEeccccC-CC-CcEEEEeccCCCC-----cEEEEEEcC-CeE-EEcCCCcCC-CCCcCCCCCCHHHHHHH
Confidence 68999999999875331 22 2333433211122 123566764 444 567665421 11234566788999999
Q ss_pred HHHHHHhcccc--CcccccceeeeeecccCCCCC---------ceeccCCCCCcEEEEecCCCccchhhHHHHHHHHHHH
Q 014198 338 KRVARTVSSHL--GEEAQVKAEQACFLPCTDDGV---------PVIGELPGIKGCYVGTGHNCWGILNGPATGAALAELV 406 (429)
Q Consensus 338 ~~~~~~~~p~l--~~~~~~~~~~~g~r~~t~d~~---------p~ig~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i 406 (429)
++.+.+++|.+ .. .++...|+|+||.++|+. |+|+..+ +|++.++|.. ++.++.+|+.+++++
T Consensus 335 l~~~~~~~P~~~l~~-~~v~~~waG~Rp~~~d~~~~~~~~~r~~~i~~~~--~gl~~v~GGk---~Tt~r~~Ae~~~~~i 408 (571)
T 2rgh_A 335 LDVINHRYPEANITL-ADIEASWAGLRPLLIGNSGSPSTISRGSSLEREP--DGLLTLSGGK---ITDYRKMAEGALRLI 408 (571)
T ss_dssp HHHHHHHSTTTCCCG-GGCCEEEEEEECCBCC-----------EEEEECT--TSCEEEEECC---GGGHHHHHHHHHHHH
T ss_pred HHHHHHhcCccCCch-hceeEEeEEeeeccCCCCCCcccCCCCcEEecCC--CCeEEEeCcc---hhhHHHHHHHHHHHH
Confidence 99999999974 55 688999999999998753 6776543 8999776643 999999999998887
Q ss_pred h
Q 014198 407 M 407 (429)
Q Consensus 407 ~ 407 (429)
.
T Consensus 409 ~ 409 (571)
T 2rgh_A 409 R 409 (571)
T ss_dssp H
T ss_pred H
Confidence 4
No 19
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.96 E-value=2.9e-28 Score=240.62 Aligned_cols=333 Identities=14% Similarity=0.077 Sum_probs=210.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCc-chhhhHHHHHHHHHHHHHhCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGP-LSSLARASFNLHRSLAEELNGP 130 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~ 130 (429)
..+||+|||||++|+++|+.|+++|++|+||||+++++|+|++++++++.+..+... -..+..+.......+......
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~GtS~~ss~lihgG~ryl~~~~~~l~~e~~~e~~~l~~~ap~- 95 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFASGTSSRSTKLVHGGLRYLKQFEIKLVAEVGKERAIVYENAPH- 95 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTCSGGGSSCCEECC---------------CHHHHHHHHHHCTT-
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCCCcccCCcCccccchHHHHhcCHHHHHHHHHHHHHHHHhCch-
Confidence 468999999999999999999999999999999999999999999999876544322 111222222222222222111
Q ss_pred CCcCeeeeeeeEEeecc---------cccCCCCCcccc-CCCCCCCCCCCC-------CC-CCcc-CccccceeEehHHH
Q 014198 131 DNYGYRALTTLSLTVTE---------SQQSGSKPSNKA-NSLIPSWVDGPA-------RS-PTTI-GSTQTTAQVHPQLF 191 (429)
Q Consensus 131 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~-~~~~~~~~~~~~-------~~-~~~~-g~~~~~~~~~~~~l 191 (429)
+ ......+...... ............ .....++++... .. .... +.....+++++..+
T Consensus 96 --l-~~~~~~~~p~~~~~~~~~~~~~~g~~~~d~l~~~~~~~~~~~l~~~~~~~~~P~l~~~~~~gg~~~~dg~vd~~~l 172 (561)
T 3da1_A 96 --V-TTPEWMLLPIFKDGTFGKFSTSLGLKVYDYLADVRKDERRYMLNEKQTLEKEPLLRKENLKGGGIYVEYRTDDARL 172 (561)
T ss_dssp --T-CEEEEEEEEECC---------------------------CEEECHHHHHHHCTTSCCTTCCEEEEEEEEECCHHHH
T ss_pred --h-ccccceeEeecCCccHHHHHHHhHHHHHHHhhcccCCCCcEEECHHHHHHhCccCChhhceeEEEecCceEcHHHH
Confidence 0 1111111100000 000000000000 011111222111 00 1111 22334679999999
Q ss_pred HHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeC---C--eEEEcCEEEEcCCCCchHHH-hhhcc--cccccc
Q 014198 192 TKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEG---G--RVVESDAVVLALGPWSGKFE-LLASM--FRVSGL 262 (429)
Q Consensus 192 ~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~---g--~~i~ad~vV~a~G~~s~~~~-~~~~~--~~~~~~ 262 (429)
+..|.+.+ .+.|+++++++ |+++..+ ++++++|++.+ | ..++||.||+|+|+|+..+. +++.. .++.+.
T Consensus 173 ~~~L~~~a-~~~G~~i~~~~~V~~l~~~-~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g~~~~~~v~p~ 250 (561)
T 3da1_A 173 TLEIMKEA-VARGAVALNYMKVESFIYD-QGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRSKHGKYLKLS 250 (561)
T ss_dssp HHHHHHHH-HHTTCEEEESEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTTCCCSSEEEEE
T ss_pred HHHHHHHH-HHcCCEEEcCCEEEEEEEc-CCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcCCCCCceEEec
Confidence 99999999 88999999999 9999987 77888888764 2 57999999999999999888 55543 678999
Q ss_pred eeeEEEecCCCCCCCCCceeEeeeccCCCCCCCCCCCceEecCCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 014198 263 KAHSIILEPKEADAITPHALFLSYYPAQGEGGKPMDPEVYPRPTGEVYLCGMSSEQEVPDDPETVSGDPASIQVLKRVAR 342 (429)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 342 (429)
+++.+.++... ......++.... .+++ ..++.|. +|.+ ++|++.... ..+..+..++++.++.+++.+.
T Consensus 251 kG~~lvl~~~~--~~~~~~~~~~~~-~dgr-----~v~~iP~-~g~~-~iGtT~~~~-~~~~~~~~~t~~~i~~ll~~~~ 319 (561)
T 3da1_A 251 KGVHLVVDQSR--FPLRQAVYFDTE-SDGR-----MIFAIPR-EGKT-YIGTTDTFY-DKDIASPRMTVEDRDYILAAAN 319 (561)
T ss_dssp EEEEEEEEGGG--SCCSSEEEECCS-SSCC-----CEEEEEE-TTEE-EECCCCEEE-CSCTTCCCCCHHHHHHHHHHHH
T ss_pred cEEEEEECCcc--CCCceEEEeccC-CCCc-----EEEEEec-CCCE-EEcCCCCcc-CCCcCCCCCCHHHHHHHHHHHH
Confidence 99998887543 122334443321 2231 2456777 5554 567776421 1223456788999999999999
Q ss_pred HhccccC--cccccceeeeeecccCCCC---------CceeccCCCCCcEEEEecCCCccchhhHHHHHHHHHHHh
Q 014198 343 TVSSHLG--EEAQVKAEQACFLPCTDDG---------VPVIGELPGIKGCYVGTGHNCWGILNGPATGAALAELVM 407 (429)
Q Consensus 343 ~~~p~l~--~~~~~~~~~~g~r~~t~d~---------~p~ig~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~ 407 (429)
+++|.+. . .++...|+|+||.+.|. ..+|...+ +|++.++|.. ++.++.+|+.+++.+.
T Consensus 320 ~~~P~l~~~~-~~v~~~~aGlRPl~~~~~~~~~~~sR~~~i~~~~--~gli~i~Ggk---~Tt~r~mAe~~~d~~~ 389 (561)
T 3da1_A 320 YMFPSLRLTA-DDVESSWAGLRPLIHEEGKKASEISRKDEIFFSD--SGLISIAGGK---LTGYRKMAERTVDAVA 389 (561)
T ss_dssp HHCTTCCCCT-TTEEEEEEEEEEEEEC-----------CCEEECS--SCCEEECCCC---STTHHHHHHHHHHHHH
T ss_pred HhCCCCCCCh-hhEEEEeEEeccccCCCCCCccccccceEEEecC--CCeEEEeCCh---hhhHHHHHHHHHHHHH
Confidence 9999876 5 68899999999986541 23333333 7888888764 9999999999998874
No 20
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.82 E-value=4.6e-19 Score=168.59 Aligned_cols=292 Identities=17% Similarity=0.092 Sum_probs=165.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDN 132 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 132 (429)
++||+|||||++|+++|+.|+++|++|+|||+....+ .+...++.+.. +. .+.++....
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g-~~~~~~~~~~~----------------~~----~~~lg~~~~ 62 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIG-SPVRCGEGLSK----------------GI----LNEADIKAD 62 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTT-CSCCSCCEEET----------------HH----HHHTTCCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCC-CCcccccccCH----------------HH----HHHcCCCCC
Confidence 5899999999999999999999999999999997332 22223333321 22 233333211
Q ss_pred --cCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEc
Q 014198 133 --YGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIG 210 (429)
Q Consensus 133 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~ 210 (429)
+.......+.+...... ....++... ...+....+++..+.+.|.+.+ ++.|++++.+
T Consensus 63 ~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~------~~~~~~~~~~~~~l~~~L~~~~-~~~gv~i~~~ 122 (397)
T 3cgv_A 63 RSFIANEVKGARIYGPSEK-------------RPIILQSEK------AGNEVGYVLERDKFDKHLAALA-AKAGADVWVK 122 (397)
T ss_dssp TTTEEEEESEEEEECTTCS-------------SCEEEC-----------CCCEEEECHHHHHHHHHHHH-HHHTCEEESS
T ss_pred hHHhhhhcceEEEEcCCCC-------------EEEEEeccc------cCCceeEEEeHHHHHHHHHHHH-HhCCCEEEEC
Confidence 11111111221111100 000000000 0123467789999999999999 7789999999
Q ss_pred e-EEEEEEccCCcEEEEEEe---CCeEEEcCEEEEcCCCCchHHHhhhccc-ccccc---eeeEEEecCCCCCCCCCcee
Q 014198 211 K-VERVGVGEGGRVESVMIE---GGRVVESDAVVLALGPWSGKFELLASMF-RVSGL---KAHSIILEPKEADAITPHAL 282 (429)
Q Consensus 211 ~-v~~i~~~~~g~v~~v~~~---~g~~i~ad~vV~a~G~~s~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~ 282 (429)
+ |+++..+ ++.+.+|.+. ++.+++||.||.|+|.++.....++... +..+. .+....+.... ..+...
T Consensus 123 ~~v~~i~~~-~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 198 (397)
T 3cgv_A 123 SPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMINVD---VDPDYT 198 (397)
T ss_dssp CCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHHTCCTTCCCGGGEEEEEEEEEESCC---CCTTEE
T ss_pred CEEEEEEEe-CCEEEEEEEEECCeEEEEEcCEEEECCCcchHhHHhcCCCccCCChhheeEEEEEEeccCC---CCCCcE
Confidence 9 9999987 7777667763 4568999999999999995444665544 22221 12222222221 222222
Q ss_pred EeeeccCCCCCCCCCCCceEecCCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhccccCcccccceeeeeec
Q 014198 283 FLSYYPAQGEGGKPMDPEVYPRPTGEVYLCGMSSEQEVPDDPETVSGDPASIQVLKRVARTVSSHLGEEAQVKAEQACFL 362 (429)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~~~~~~~~~g~r 362 (429)
...... .. +....+++|..++...+ |...... ........+..++.+.+..|.+.. .++...+.+..
T Consensus 199 ~~~~~~-~~---~~g~~~~~P~~~~~~~v-g~~~~~~-------~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~ 265 (397)
T 3cgv_A 199 DFYLGS-IA---PAGYIWVFPKGEGMANV-GIGSSIN-------WIHNRFELKNYLDRFIENHPGLKK-GQDIQLVTGGV 265 (397)
T ss_dssp EEECST-TS---TTEEEEEEEEETTEEEE-EEEEETT-------TCSCHHHHHHHHHHHHHTCHHHHT-SEEEEEEEEEE
T ss_pred EEEeCC-cC---CCceEEEEECCCCeEEE-EEEeccc-------cccCCCCHHHHHHHHHHhCcCCCC-CeEEeeeeeee
Confidence 111110 00 11224566777765443 3222211 012234444455555554565555 56667777777
Q ss_pred cc-------CCCCCceeccCCCCCcEEEEecCCCccchhhHHHHHHHHHHHh
Q 014198 363 PC-------TDDGVPVIGELPGIKGCYVGTGHNCWGILNGPATGAALAELVM 407 (429)
Q Consensus 363 ~~-------t~d~~p~ig~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~ 407 (429)
|. ..++..++|... .....+.|+|+.+|...|..+++.|.
T Consensus 266 p~~~~~~~~~~~~v~liGDAa-----~~~~P~~G~G~~~a~~~a~~la~~l~ 312 (397)
T 3cgv_A 266 SVSKVKMPITMPGLMLVGDAA-----RLIDPITGGGIANAIVSGMYAAQVTK 312 (397)
T ss_dssp ECCCCCSCCEETTEEECGGGG-----TCSCTTTCCCHHHHHHHHHHHHHHHH
T ss_pred ecCCCccceeeCCEEEEEccc-----cCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 65 233444555332 34466789999999998888877764
No 21
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.80 E-value=1.5e-17 Score=157.91 Aligned_cols=292 Identities=15% Similarity=0.064 Sum_probs=159.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC-CccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS-VACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPD 131 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~-~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 131 (429)
+|||+|||||++|+++|+.|+++|++|+|+||.+ ++. ....++.+.+ ..++ +++...
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~--~~~~g~~l~~----------------~~l~----~l~~~~ 61 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGS--PVRCGEGLSK----------------GILN----EADIKA 61 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTC--SCCSCCEEET----------------HHHH----HTTCCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCC--CCceecccCH----------------HHHH----HcCCCc
Confidence 5899999999999999999999999999999976 322 2222333332 2222 233321
Q ss_pred C--cCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEE
Q 014198 132 N--YGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVI 209 (429)
Q Consensus 132 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~ 209 (429)
. ..........+....... .... ............+++..+.+.|.+.+ .+.|+++++
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~--------------~~~~-----~~~~~~~~~~~~i~R~~~~~~L~~~a-~~~G~~~~~ 121 (397)
T 3oz2_A 62 DRSFIANEVKGARIYGPSEKR--------------PIIL-----QSEKAGNEVGYVLERDKFDKHLAALA-AKAGADVWV 121 (397)
T ss_dssp CTTTEEEEESEEEEECTTCSS--------------CEEE-----ECSSSSCCCEEEECHHHHHHHHHHHH-HHHTCEEES
T ss_pred hhhhhhcccceEEEEeCCCce--------------Eeec-----cccccCCceeEEEEHHHHHHHHHHHH-HhcCcEEee
Confidence 1 111111111111110000 0000 00001123446788999999999999 888999999
Q ss_pred ce-EEEEEEccCCcEEEEEEe-CC--eEEEcCEEEEcCCCCchHHHhhhcccccccceeeE--EEecCCCCCCCCCceeE
Q 014198 210 GK-VERVGVGEGGRVESVMIE-GG--RVVESDAVVLALGPWSGKFELLASMFRVSGLKAHS--IILEPKEADAITPHALF 283 (429)
Q Consensus 210 ~~-v~~i~~~~~g~v~~v~~~-~g--~~i~ad~vV~a~G~~s~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 283 (429)
++ |+++..+ ++++..+... ++ .+++||.||.|+|.+|.....++...+........ ....... ....+....
T Consensus 122 ~~~v~~~~~~-~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~vr~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 199 (397)
T 3oz2_A 122 KSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMIN-VDVDPDYTD 199 (397)
T ss_dssp SCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHHTCGGGCCCGGGEEEEEEEEEES-CCCCTTEEE
T ss_pred eeeeeeeeec-cceeeeeeecccccceEEEEeEEEeCCccccHHHHHcCCCcccccceeeeeeEEEEeec-cccCcccce
Confidence 99 9999887 7766665543 23 36899999999999998665555443332222111 1111111 011121111
Q ss_pred eeeccCCCCCCCCCCCceEecCCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhccccCcccccceeeeeecc
Q 014198 284 LSYYPAQGEGGKPMDPEVYPRPTGEVYLCGMSSEQEVPDDPETVSGDPASIQVLKRVARTVSSHLGEEAQVKAEQACFLP 363 (429)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~g~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~~~~~~~~~g~r~ 363 (429)
..... .. +.....++|..++...++-..... .......++..++.+.+..|.+.+ ......+.+..|
T Consensus 200 ~~~~~-~~---~~g~~~~~~~~~~~~~vg~~~~~~--------~~~~~~~~~~~l~~~~~~~~~l~~-~~~~~~~~~~~~ 266 (397)
T 3oz2_A 200 FYLGS-IA---PAGYIWVFPKGEGMANVGIGSSIN--------WIHNRFELKNYLDRFIENHPGLKK-GQDIQLVTGGVS 266 (397)
T ss_dssp EECST-TS---TTEEEEEEEEETTEEEEEEEEETT--------TSCSHHHHHHHHHHHHHTCHHHHT-SEEEEEEEEEEE
T ss_pred eeeec-cC---CCceEEEeecccceeEEEEeeccc--------hhhhhhhHHHHHHHHHHhCccccc-cceeeeeecccc
Confidence 11110 00 111234556666644332211111 112345556666666666777665 555566666665
Q ss_pred cCCCC-------CceeccCCCCCcEEEEecCCCccchhhHHHHHHHHHHH
Q 014198 364 CTDDG-------VPVIGELPGIKGCYVGTGHNCWGILNGPATGAALAELV 406 (429)
Q Consensus 364 ~t~d~-------~p~ig~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i 406 (429)
..... ..++|... .....++|.|+.+|...|..+|+.|
T Consensus 267 ~~~~~~~~~~~~v~lvGDAA-----~~~~P~~G~Gi~~A~~~g~~~A~~i 311 (397)
T 3oz2_A 267 VSKVKMPITMPGLMLVGDAA-----RLIDPITGGGIANAIVSGMYAAQVT 311 (397)
T ss_dssp CCCCCSCCEETTEEECGGGG-----TCSCTTTCCCHHHHHHHHHHHHHHH
T ss_pred ccCcccceeeeeEEEccccc-----ccCCCCcchhHHHHHHHHHHHHHHH
Confidence 54333 33344321 2334567889888888777777665
No 22
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.77 E-value=7.7e-18 Score=161.43 Aligned_cols=300 Identities=15% Similarity=0.068 Sum_probs=158.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDN 132 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 132 (429)
.+||+|||||++|+++|+.|+++|++|+|||+........ +..+.+. ..-..+.+.+++.+... +
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~---g~~~~~~-------~~~~l~~~g~~~~~~~~-~---- 69 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVI---GESLLPR-------CMEHLDEAGFLDAVKAQ-G---- 69 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCS---CCBCCGG-------GHHHHHHTTCHHHHHHT-T----
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc---cCcccHh-------HHHHHHHcCChHHHHHc-C----
Confidence 5899999999999999999999999999999997432111 1111110 00001111222222221 1
Q ss_pred cCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-
Q 014198 133 YGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK- 211 (429)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~- 211 (429)
+.......+....... .+.+.. .........+.+++..+.+.|.+.+ ++.|+++++++
T Consensus 70 --~~~~~~~~~~~~~~~~------------~~~~~~------~~~~~~~~~~~~~r~~~~~~L~~~a-~~~gv~i~~~~~ 128 (421)
T 3nix_A 70 --FQQKFGAKFVRGKEIA------------DFNFSD------QFSNGWNWTWQVPRGNFDKTLADEA-ARQGVDVEYEVG 128 (421)
T ss_dssp --CEEECEEEEEETTEEE------------EEETTS------CSSCSCCCEEECCHHHHHHHHHHHH-HHHTCEEECSEE
T ss_pred --CcccCCcEEEeCCeeE------------EEeehh------hcCCCCCceeEECHHHHHHHHHHHH-HhCCCEEEcCCE
Confidence 1111111111111000 000000 0001124457899999999999999 77899999999
Q ss_pred EEEEEEccCCcEEEEEEeCCe--EEEcCEEEEcCCCCchHHHhhhcccccccceeeEEE--ecCCCC-CCCC--CceeEe
Q 014198 212 VERVGVGEGGRVESVMIEGGR--VVESDAVVLALGPWSGKFELLASMFRVSGLKAHSII--LEPKEA-DAIT--PHALFL 284 (429)
Q Consensus 212 v~~i~~~~~g~v~~v~~~~g~--~i~ad~vV~a~G~~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~--~~~~~~ 284 (429)
|++++.++++.+..+.+.+|. +++||.||+|+|.++.....++...+........+. +..... .... ...+..
T Consensus 129 v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (421)
T 3nix_A 129 VTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVAAEMEGNRITA 208 (421)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC----CCSEEEE
T ss_pred EEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCccCCCCeEEEE
Confidence 999998744444556666776 699999999999998544466655554433332322 222110 0111 111111
Q ss_pred eeccCCCCCCCCCCCceEecCCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcccc----Ccccccc---ee
Q 014198 285 SYYPAQGEGGKPMDPEVYPRPTGEVYLCGMSSEQEVPDDPETVSGDPASIQVLKRVARTVSSHL----GEEAQVK---AE 357 (429)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~g~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l----~~~~~~~---~~ 357 (429)
..... ....+++|..++...++-....... . .... ..+..++.+.+..|.+ .. .... ..
T Consensus 209 ~~~~~------~g~~~~~P~~~~~~~vg~~~~~~~~-~---~~~~---~~~~~l~~~~~~~p~~~~~l~~-~~~~~~~~~ 274 (421)
T 3nix_A 209 VVHKP------KVWIWVIPFSNGNTSVGFVGEPSYF-D---EYTG---TPEERMRAMIANEGHIAERFKS-EEFLFEPRT 274 (421)
T ss_dssp EEEET------TEEEEEEECTTSEEEEEEEECHHHH-T---TSCS---CHHHHHHHHHHTCTTTHHHHTT-CCBSSCCEE
T ss_pred EeCCC------CEEEEEEEECCCCEEEEEEecHHHh-h---hcCC---CHHHHHHHHHHhCcHHHHHHhc-CccccCcee
Confidence 11111 1123456777776543322111100 0 0011 1222333333334433 22 1111 11
Q ss_pred eee----ecccCCCCCceeccCCCCCcEEEEecCCCccchhhHHHHHHHHHHHh
Q 014198 358 QAC----FLPCTDDGVPVIGELPGIKGCYVGTGHNCWGILNGPATGAALAELVM 407 (429)
Q Consensus 358 ~~g----~r~~t~d~~p~ig~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~ 407 (429)
+.+ ..+...++.+++|... .....+.|+|+..|...|..+++.|.
T Consensus 275 ~~~~~~~~~~~~~~~v~lvGDAa-----~~~~P~~G~G~~~A~~~a~~la~~l~ 323 (421)
T 3nix_A 275 IEGYAISASKLYGDGFVLTGNAT-----EFLDPIFSSGATFAMESGSKGGKLAV 323 (421)
T ss_dssp EECCCBEESCSEETTEEECGGGT-----CBCCSTTCCHHHHHHHHHHHHHHHHH
T ss_pred ecccceeeeeeccCCEEEecccc-----cccCCcccccHHHHHHHHHHHHHHHH
Confidence 211 2334567788888654 44567889999999999998888874
No 23
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.75 E-value=5.5e-17 Score=156.75 Aligned_cols=287 Identities=16% Similarity=0.157 Sum_probs=154.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCc-cccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVA-CAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPD 131 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~-~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 131 (429)
.+||+|||||++|+++|+.|+++|++|+|||+.... .+.. ..+..+. .+.++ .++...
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~-~~g~~l~----------------~~~l~----~lg~~~ 64 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDK-PCGDAVS----------------KAHFD----KLGMPY 64 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCS-CCCCEEE----------------HHHHH----HTTCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcc-ccccccc----------------HHHHH----HhcCCC
Confidence 589999999999999999999999999999998732 2221 1111111 12332 233311
Q ss_pred CcC--e-eeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEE
Q 014198 132 NYG--Y-RALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVV 208 (429)
Q Consensus 132 ~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~ 208 (429)
... + .......+.. +.... ..........+++..+.+.|.+.+ .+.|++++
T Consensus 65 ~~~~~~~~~~~~~~~~~-----------------------~~~~~--~~~~~~~~~~i~r~~l~~~L~~~a-~~~gv~i~ 118 (453)
T 3atr_A 65 PKGEELENKINGIKLYS-----------------------PDMQT--VWTVNGEGFELNAPLYNQRVLKEA-QDRGVEIW 118 (453)
T ss_dssp CCGGGEEEEEEEEEEEC-----------------------TTSSC--EEEEEEEEEEECHHHHHHHHHHHH-HHTTCEEE
T ss_pred CchHHHHhhhcceEEEC-----------------------CCCce--EEeECCCcEEEcHHHHHHHHHHHH-HHcCCEEE
Confidence 100 0 0111111100 00000 000112345688899999999999 77899999
Q ss_pred Ece-EEEEEEccCCcEEEEEEe---CCe--EEEcCEEEEcCCCCchHHHhhhcccc----cccce---eeEEEecCCCCC
Q 014198 209 IGK-VERVGVGEGGRVESVMIE---GGR--VVESDAVVLALGPWSGKFELLASMFR----VSGLK---AHSIILEPKEAD 275 (429)
Q Consensus 209 ~~~-v~~i~~~~~g~v~~v~~~---~g~--~i~ad~vV~a~G~~s~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~ 275 (429)
+++ |+++..+ ++.+.+|++. +|. +++||.||.|+|.++.....++...+ ..+.. .....+......
T Consensus 119 ~~~~v~~i~~~-~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (453)
T 3atr_A 119 DLTTAMKPIFE-DGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDI 197 (453)
T ss_dssp SSEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCC
T ss_pred eCcEEEEEEEE-CCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCc
Confidence 999 9999987 6777666664 565 79999999999999875545444332 11111 111112211100
Q ss_pred CCCCce-eEeeeccCCCCCCCCCCCceEecCCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhccccCccccc
Q 014198 276 AITPHA-LFLSYYPAQGEGGKPMDPEVYPRPTGEVYLCGMSSEQEVPDDPETVSGDPASIQVLKRVARTVSSHLGEEAQV 354 (429)
Q Consensus 276 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~~~~ 354 (429)
...... ++....... ....+++|..++.+.++-..... . . ..+ ..+.+.+.+.++.|.+.. .++
T Consensus 198 ~~~~~~~~~~~~~~~~-----~g~~~~~P~~~~~~~vg~~~~~~---~---~-~~~--~~~~~~~~l~~~~~~~~~-~~~ 262 (453)
T 3atr_A 198 EDHDYLRIFIDQETSP-----GGYWWYFPKGKNKVNVGLGIQGG---M---G-YPS--IHEYYKKYLDKYAPDVDK-SKL 262 (453)
T ss_dssp TTTTEEEEECCTTTST-----TSCEEEEEEETTEEEEEEEEESS---S---C-CCC--HHHHHHHHHHHHCTTEEE-EEE
T ss_pred cCCCeEEEEECCCCCC-----CcEEEEEECCCCeEEEEEEecCC---C---C-CCC--HHHHHHHHHHhhhhhcCC-CeE
Confidence 111111 222211011 12234668777755442222111 0 0 011 223444445555566655 455
Q ss_pred ceeeeeecccCCCCCceeccCCCCCcEEE-------EecCCCccchhhHHHHHHHHHHHh
Q 014198 355 KAEQACFLPCTDDGVPVIGELPGIKGCYV-------GTGHNCWGILNGPATGAALAELVM 407 (429)
Q Consensus 355 ~~~~~g~r~~t~d~~p~ig~~~~~~~~~~-------~~G~~~~G~~~a~~~a~~la~~i~ 407 (429)
...+.+..|... ++-... .+++++ ...+.|+|+..|...|..+++.|.
T Consensus 263 ~~~~~~~~p~~~---~~~~~~--~~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~ 317 (453)
T 3atr_A 263 LVKGGALVPTRR---PLYTMA--WNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAIL 317 (453)
T ss_dssp EEEEEEEEECSS---CCSCSE--ETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHH
T ss_pred EeccceeccCCC---CCCcee--cCCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHH
Confidence 566666655421 111111 133322 234889999999999988888874
No 24
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.72 E-value=6.9e-16 Score=150.30 Aligned_cols=306 Identities=16% Similarity=0.077 Sum_probs=160.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGP 130 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 130 (429)
+..+||+|||||++|+++|+.|+++|++|+||||...... .++ + ..+...+++++++ ++..
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~-~~r-~-------------~~l~~~~~~~l~~----lGl~ 70 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTG-ESR-G-------------LGFTARTMEVFDQ----RGIL 70 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCC-CCC-S-------------EEECHHHHHHHHH----TTCG
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCC-CCc-e-------------eEECHHHHHHHHH----CCCH
Confidence 4578999999999999999999999999999999872211 111 1 1122333344443 2321
Q ss_pred CCcCe-eeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEE
Q 014198 131 DNYGY-RALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVI 209 (429)
Q Consensus 131 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~ 209 (429)
..+.- .......+ .... ++.. ......+....+++..+.+.|.+.+ .+.|++|++
T Consensus 71 ~~~~~~~~~~~~~~----------------~~~~---~~~~----~~~~~~~~~~~i~~~~l~~~L~~~~-~~~gv~v~~ 126 (499)
T 2qa2_A 71 PAFGPVETSTQGHF----------------GGRP---VDFG----VLEGAHYGVKAVPQSTTESVLEEWA-LGRGAELLR 126 (499)
T ss_dssp GGGCSCCEESEEEE----------------TTEE---EEGG----GSTTCCCEEEEEEHHHHHHHHHHHH-HHTTCEEEE
T ss_pred HHHHhcccccccee----------------ccee---cccc----cCCCCCCceEecCHHHHHHHHHHHH-HhCCCEEEc
Confidence 11100 00000000 0000 0000 0000123456788899999999999 778999999
Q ss_pred ce-EEEEEEccCCcEEEEEEeCCe---EEEcCEEEEcCCCCchHHHhhhcccccccc--eeeEEEecCCCCCCCCCceeE
Q 014198 210 GK-VERVGVGEGGRVESVMIEGGR---VVESDAVVLALGPWSGKFELLASMFRVSGL--KAHSIILEPKEADAITPHALF 283 (429)
Q Consensus 210 ~~-v~~i~~~~~g~v~~v~~~~g~---~i~ad~vV~a~G~~s~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 283 (429)
++ |++++.+ ++.+. |++.++. +++||.||.|+|.+|.....++...+-... ......+.... .... ..
T Consensus 127 ~~~v~~i~~~-~~~v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~v~~~~---~~~~-~~ 200 (499)
T 2qa2_A 127 GHTVRALTDE-GDHVV-VEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAGFDFPGTSASREMFLADIRGCE---ITPR-PI 200 (499)
T ss_dssp SCEEEEEEEC-SSCEE-EEEECSSCEEEEEEEEEEECCCTTCHHHHHTTCCCCEECCCCCEEEEEEESCC---CCCE-EE
T ss_pred CCEEEEEEEe-CCEEE-EEEEcCCCcEEEEeCEEEEccCcccHHHHHcCCCCCCCCCccEEEEEEEEECC---CCcc-eE
Confidence 99 9999987 44443 6666654 799999999999999866566654443222 22222333221 1111 11
Q ss_pred eeeccCCCCCCCCCCCceEecCCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhccc-cCccccc--ceeeee
Q 014198 284 LSYYPAQGEGGKPMDPEVYPRPTGEVYLCGMSSEQEVPDDPETVSGDPASIQVLKRVARTVSSH-LGEEAQV--KAEQAC 360 (429)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~g~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~-l~~~~~~--~~~~~g 360 (429)
..+. . .....++|.++|...+........ ........+.+. +.+.++++++. +.. ..+ ...|..
T Consensus 201 ~~~~-~------~g~~~~~P~~~g~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~l~~~~~~~~~~-~~~~~~~~~~~ 267 (499)
T 2qa2_A 201 GETV-P------LGMVMSAPLGDGVDRIIVCERGAP--ARRRTGPPPYQE---VAAAWQRLTGQDISH-GEPVWVSAFGD 267 (499)
T ss_dssp EEEE-T------TEEEEEEECSSSCEEEEEEETTCC--CCCCSSSCCHHH---HHHHHHHHHSCCCTT-CEEEEEEEECC
T ss_pred EEEC-C------CeEEEEEEcCCCEEEEEEEecCCC--CccccCCCCHHH---HHHHHHHHhCCCCCc-cceeEEEEEeC
Confidence 1111 1 112356687777544332111110 111112233333 44444444432 211 111 111211
Q ss_pred ----ecccCCCCCceeccCCCCCcEEEEecCCCccchhhHHHHHHHHHHHh---cCCCCcccCCCCCCCC
Q 014198 361 ----FLPCTDDGVPVIGELPGIKGCYVGTGHNCWGILNGPATGAALAELVM---DGCASIVDLSRFSPAR 423 (429)
Q Consensus 361 ----~r~~t~d~~p~ig~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~---~g~~~~~~~~~~~~~R 423 (429)
...+..++..++|.. .+....++|+|+..+..-|..|+..|. .|...+..++.|.-+|
T Consensus 268 ~~~~a~~~~~grv~L~GDA-----AH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~~~~~~L~~Ye~eR 332 (499)
T 2qa2_A 268 PARQVSAYRRGRVLLAGDS-----AHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSGRAPAGLLDTYHEER 332 (499)
T ss_dssp CEEECSCSEETTEEECGGG-----TEEECCCSSCHHHHHHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHH
T ss_pred CcEEcccccCCCEEEEecc-----cccCCCccccchhhhHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 111234456677754 367788889998888776665544431 4443333355554444
No 25
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.72 E-value=1.8e-16 Score=156.74 Aligned_cols=304 Identities=16% Similarity=0.122 Sum_probs=159.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPD 131 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 131 (429)
..+||+|||||++|+++|+.|+++|++|+|||+...+....+ ..+.+. .....+.+.+++.+... ..
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G---~~l~p~-------~~~~l~~lGl~~~l~~~-~~-- 88 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVG---ESLLPG-------TMSILNRLGLQEKIDAQ-NY-- 88 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCC---CBCCHH-------HHHHHHHTTCHHHHHHH-CC--
T ss_pred CCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCcee---eeECHH-------HHHHHHHcCCcHHHHhc-CC--
Confidence 358999999999999999999999999999999974432211 111110 00000111112222211 11
Q ss_pred CcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce
Q 014198 132 NYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK 211 (429)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~ 211 (429)
....+.......... .....+..... .....+..+.+++..+.+.|.+.+ ++.|+++++++
T Consensus 89 ---~~~~~~~~~~~~~~~-----------~~~~~~~~~~~----~~~~~~~~~~v~r~~l~~~L~~~a-~~~Gv~i~~g~ 149 (591)
T 3i3l_A 89 ---VKKPSATFLWGQDQA-----------PWTFSFAAPKV----APWVFDHAVQVKREEFDKLLLDEA-RSRGITVHEET 149 (591)
T ss_dssp ---EEECEEEEECSSSCC-----------CEEEECCCC------CTTCCSCEEECCHHHHHHHHHHHH-HHTTCEEETTC
T ss_pred ---cccCCcEEEecCCCc-----------cceeecccccc----cccccCeeEEEcHHHHHHHHHHHH-HhCCCEEEeCC
Confidence 111111111000000 00000000000 000234567899999999999999 78899999999
Q ss_pred -EEEEEEccCCcEEEEEEe-CC--eEEEcCEEEEcCCCCchHHHhhhcccccccceeeEE--EecCCC--CCCCCCceeE
Q 014198 212 -VERVGVGEGGRVESVMIE-GG--RVVESDAVVLALGPWSGKFELLASMFRVSGLKAHSI--ILEPKE--ADAITPHALF 283 (429)
Q Consensus 212 -v~~i~~~~~g~v~~v~~~-~g--~~i~ad~vV~a~G~~s~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~ 283 (429)
|+++..+ ++.++.|++. +| .+++||.||.|+|.++.....++...+........+ .+.... ..+.... .+
T Consensus 150 ~V~~v~~~-~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~~~~~~~~~-~~ 227 (591)
T 3i3l_A 150 PVTDVDLS-DPDRVVLTVRRGGESVTVESDFVIDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDPFEGDLKGT-TY 227 (591)
T ss_dssp CEEEEECC-STTCEEEEEEETTEEEEEEESEEEECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCSCCSTTTTC-EE
T ss_pred EEEEEEEc-CCCEEEEEEecCCceEEEEcCEEEECCCCcchhHHHcCCCCCCccccceEEEEEEecCccccCCCCCc-eE
Confidence 9999876 5666778876 56 579999999999999875555544322211112111 122111 0011122 22
Q ss_pred eeeccCCCCCCCCCCCceEecCCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcccc----Cc-----cccc
Q 014198 284 LSYYPAQGEGGKPMDPEVYPRPTGEVYLCGMSSEQEVPDDPETVSGDPASIQVLKRVARTVSSHL----GE-----EAQV 354 (429)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~g~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l----~~-----~~~~ 354 (429)
.... .. +..+++|..++.+.+.-...... . ........+.+.+.+...+|.+ .. ....
T Consensus 228 ~~~~-~~------G~~w~iPl~~~~~sv~~~~~~~~-----~-~~l~~~~~~~~~~~l~~~~p~l~~~l~~~~~~~~~~~ 294 (591)
T 3i3l_A 228 SITF-ED------GWVWMIPIKDDLYSVGLVVDRSK-----S-AEVREQGADAFYSSTLAKCAKAMDILGGAEQVDEVRI 294 (591)
T ss_dssp EEEE-TT------EEEEEEECSSSEEEEEEEEEGGG-----H-HHHHHHCHHHHHHHHHTTCHHHHHHHTTCEECSCCEE
T ss_pred EEEc-CC------cEEEEEECCCCeEEEEEEcCHHH-----H-hhhccCCHHHHHHHHHHhCHHHHHHHhcCccccCceE
Confidence 2111 11 12355677766543322111100 0 0000111233333333333322 11 0223
Q ss_pred ceeeee-ecccCCCCCceeccCCCCCcEEEEecCCCccchhhHHHHHHHHHHHh
Q 014198 355 KAEQAC-FLPCTDDGVPVIGELPGIKGCYVGTGHNCWGILNGPATGAALAELVM 407 (429)
Q Consensus 355 ~~~~~g-~r~~t~d~~p~ig~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~ 407 (429)
...|.+ ......++..++|... .....+.|+|+.+|...|..+++.|.
T Consensus 295 ~~~~~~~~~~~~~~rvvLIGDAA-----h~~~Pl~GqGinlAl~dA~~LA~~L~ 343 (591)
T 3i3l_A 295 VQDWSYDTEVFSADRFFLCGDAA-----CFTDPLFSQGVHLASQSAVSAAAAID 343 (591)
T ss_dssp EEEEEEEESCSEETTEEECGGGT-----CBCCGGGCCHHHHHHHHHHHHHHHHH
T ss_pred ecccccchhhcccCCEEEEcccc-----ccCCCcccccHHHHHHHHHHHHHHHH
Confidence 344544 3345677888899654 45677889999999998888888774
No 26
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.71 E-value=3.3e-15 Score=145.52 Aligned_cols=306 Identities=15% Similarity=0.111 Sum_probs=158.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGP 130 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 130 (429)
++++||+|||||++|+++|+.|+++|++|+||||....... .+ + ..+...+++++++ ++..
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~-~r-~-------------~~l~~~~~~~l~~----lGl~ 69 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGE-SR-G-------------LGFTARTMEVFDQ----RGIL 69 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCC-CC-S-------------EEECHHHHHHHHT----TTCG
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCC-CC-c-------------ceECHHHHHHHHH----CCCH
Confidence 56789999999999999999999999999999998732111 11 1 1122233344443 2221
Q ss_pred CCcCee-eeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEE
Q 014198 131 DNYGYR-ALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVI 209 (429)
Q Consensus 131 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~ 209 (429)
..+.-. ......+ .... ++.. ......+....++...+.+.|.+.+ .+.|+++++
T Consensus 70 ~~~~~~~~~~~~~~----------------~~~~---~~~~----~~~~~~~~~~~i~~~~l~~~L~~~~-~~~gv~v~~ 125 (500)
T 2qa1_A 70 PRFGEVETSTQGHF----------------GGLP---IDFG----VLEGAWQAAKTVPQSVTETHLEQWA-TGLGADIRR 125 (500)
T ss_dssp GGGCSCCBCCEEEE----------------TTEE---EEGG----GSTTGGGCEEEEEHHHHHHHHHHHH-HHTTCEEEE
T ss_pred HHHHhccccccccc----------------ccee---cccc----cCCCCCCceeecCHHHHHHHHHHHH-HHCCCEEEC
Confidence 110000 0000000 0000 0000 0000123456788899999999999 778999999
Q ss_pred ce-EEEEEEccCCcEEEEEEeCCe---EEEcCEEEEcCCCCchHHHhhhcccccccce--eeEEEecCCCCCCCCCceeE
Q 014198 210 GK-VERVGVGEGGRVESVMIEGGR---VVESDAVVLALGPWSGKFELLASMFRVSGLK--AHSIILEPKEADAITPHALF 283 (429)
Q Consensus 210 ~~-v~~i~~~~~g~v~~v~~~~g~---~i~ad~vV~a~G~~s~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 283 (429)
++ |++++.+ ++.+. |++.++. +++||.||.|+|.+|.....++...+-.... .....+.... .... ..
T Consensus 126 ~~~v~~i~~~-~~~v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~~~~~~---~~~~-~~ 199 (500)
T 2qa1_A 126 GHEVLSLTDD-GAGVT-VEVRGPEGKHTLRAAYLVGCDGGRSSVRKAAGFDFPGTAATMEMYLADIKGVE---LQPR-MI 199 (500)
T ss_dssp TCEEEEEEEE-TTEEE-EEEEETTEEEEEEESEEEECCCTTCHHHHHTTCCCCEECCCCEEEEEEEESCC---CCCE-EE
T ss_pred CcEEEEEEEc-CCeEE-EEEEcCCCCEEEEeCEEEECCCcchHHHHHcCCCcCCCccceEEEEEEEEeCC---CCCc-eE
Confidence 99 9999987 55543 6666553 7999999999999998665666544433222 2222232221 1111 11
Q ss_pred eeeccCCCCCCCCCCCceEecCCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcc-ccCccccc--ceeeee
Q 014198 284 LSYYPAQGEGGKPMDPEVYPRPTGEVYLCGMSSEQEVPDDPETVSGDPASIQVLKRVARTVSS-HLGEEAQV--KAEQAC 360 (429)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~g~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p-~l~~~~~~--~~~~~g 360 (429)
..+. . .....++|.+++...+........ ........+.+ .+.+.++++++ .+.. ..+ ...|..
T Consensus 200 ~~~~-~------~g~~~~~p~~~g~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~l~~~~~~~~~~-~~~~~~~~~~~ 266 (500)
T 2qa1_A 200 GETL-P------GGMVMVGPLPGGITRIIVCERGTP--PQRRETPPSWH---EVADAWKRLTGDDIAH-AEPVWVSAFGN 266 (500)
T ss_dssp EEEE-T------TEEEEEEEETTTEEEEEEEETTCC--C-----CCCHH---HHHHHHHHHHSCCCTT-SEEEEEEEEEC
T ss_pred EEEC-C------CcEEEEEEcCCCEEEEEEEcCCCC--CccccCCCCHH---HHHHHHHHhcCCCCCc-cceeEEEEecc
Confidence 1111 1 112356677777543322111110 01111223333 34444444443 2211 111 111211
Q ss_pred ----ecccCCCCCceeccCCCCCcEEEEecCCCccchhhHHHHHHHHHHHh---cCCCCcccCCCCCCCC
Q 014198 361 ----FLPCTDDGVPVIGELPGIKGCYVGTGHNCWGILNGPATGAALAELVM---DGCASIVDLSRFSPAR 423 (429)
Q Consensus 361 ----~r~~t~d~~p~ig~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~---~g~~~~~~~~~~~~~R 423 (429)
...+..++..++|.. .+....++|+|+..+..-|..|+..|. .|...+..++.|.-+|
T Consensus 267 ~~~~a~~~~~grv~L~GDA-----AH~~~P~~GqG~n~gi~DA~~La~~La~~~~g~~~~~~L~~Y~~eR 331 (500)
T 2qa1_A 267 ATRQVTEYRRGRVILAGDS-----AHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNGTATEELLDSYHSER 331 (500)
T ss_dssp CEEECSCSEETTEEECGGG-----TEECCCCSSCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred CcEEccccccCCEEEEEcc-----ccCCCCccccchhhhHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 112234556777854 477778888888887776665544431 4543333355554444
No 27
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.71 E-value=2.1e-16 Score=150.64 Aligned_cols=295 Identities=15% Similarity=0.097 Sum_probs=155.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHH------HHHH
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLH------RSLA 124 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~------~~~~ 124 (429)
.+.+||+|||||++|+++|+.|+++|++|+||||...... .+. + + .+...+.+++ +.+.
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~-~~~--~-~-----------~l~~~~~~~l~~lg~~~~~~ 85 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKP-VGA--A-I-----------SVWPNGVKCMAHLGMGDIME 85 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC-----C--E-E-----------EECHHHHHHHHHTTCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCC-cCe--e-E-----------EECHHHHHHHHHCCCHHHHH
Confidence 4568999999999999999999999999999999873211 010 1 0 1111222222 2332
Q ss_pred HHhCCCCCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcC
Q 014198 125 EELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYG 204 (429)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~G 204 (429)
...... . .+.+...... .....++.. ............+++..+.+.|.+.+ .+
T Consensus 86 ~~~~~~-----~---~~~~~~~~~g------------~~~~~~~~~---~~~~~~~~~~~~i~r~~l~~~L~~~~-~~-- 139 (407)
T 3rp8_A 86 TFGGPL-----R---RMAYRDFRSG------------ENMTQFSLA---PLIERTGSRPCPVSRAELQREMLDYW-GR-- 139 (407)
T ss_dssp HHSCCC-----C---EEEEEETTTC------------CEEEEEECH---HHHHHHSSCCEEEEHHHHHHHHHHHH-CG--
T ss_pred hhcCCC-----c---ceEEEECCCC------------CEeEEecch---hhhhhcCCceEEEEHHHHHHHHHHhC-Cc--
Confidence 221110 0 0111100000 000000000 00000113456789999999999998 65
Q ss_pred cEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHHhh-hccccc--ccceeeEEEecCCCCCCCCCc
Q 014198 205 LEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFELL-ASMFRV--SGLKAHSIILEPKEADAITPH 280 (429)
Q Consensus 205 v~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 280 (429)
++|++++ |++++.+ ++.+ .|++.+|.+++||.||.|+|.+|.....+ +..... .........++.+........
T Consensus 140 ~~i~~~~~v~~i~~~-~~~v-~v~~~~g~~~~a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (407)
T 3rp8_A 140 DSVQFGKRVTRCEED-ADGV-TVWFTDGSSASGDLLIAADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQ 217 (407)
T ss_dssp GGEEESCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECCCTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTE
T ss_pred CEEEECCEEEEEEec-CCcE-EEEEcCCCEEeeCEEEECCCcChHHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCc
Confidence 8999999 9999987 5544 47788888999999999999999877644 432111 111222223332221011111
Q ss_pred -eeEeeeccCCCCCCCCCCCceEecCCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhccccCc---ccc-cc
Q 014198 281 -ALFLSYYPAQGEGGKPMDPEVYPRPTGEVYLCGMSSEQEVPDDPETVSGDPASIQVLKRVARTVSSHLGE---EAQ-VK 355 (429)
Q Consensus 281 -~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~---~~~-~~ 355 (429)
..+.. . .....++|..++.+.+........ ..........+.+.+.+..+.|.+.. ... ..
T Consensus 218 ~~~~~~----~-----~~~~~~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 283 (407)
T 3rp8_A 218 WTTFVG----E-----GKQVSLMPVSAGRFYFFFDVPLPA-----GLAEDRDTLRADLSRYFAGWAPPVQKLIAALDPQT 283 (407)
T ss_dssp EEEEEE----T-----TEEEEEEEETTTEEEEEEEEECCT-----TCSCCTTTHHHHHHHHTTTCCHHHHHHHHHSCGGG
T ss_pred eEEEEC----C-----CcEEEEEEcCCCeEEEEEEeCCCc-----CCCCCchhHHHHHHHHhcCCChHHHHHHHcCCccc
Confidence 11211 1 123457788887655443332111 11111223445555555544442221 000 00
Q ss_pred eeeeeec------ccCCCCCceeccCCCCCcEEEEecCCCccchhhHHHHHHHHHHHh
Q 014198 356 AEQACFL------PCTDDGVPVIGELPGIKGCYVGTGHNCWGILNGPATGAALAELVM 407 (429)
Q Consensus 356 ~~~~g~r------~~t~d~~p~ig~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~ 407 (429)
..+...+ ....++..++|... .....+.|+|+..|...|..+++.|.
T Consensus 284 ~~~~~~~~~~~~~~~~~~rv~LvGDAA-----h~~~P~~GqG~~~al~da~~La~~L~ 336 (407)
T 3rp8_A 284 TNRIEIHDIEPFSRLVRGRVALLGDAG-----HSTTPDIGQGGCAAMEDAVVLGAVFR 336 (407)
T ss_dssp CEEEEEEECCCCSCCEETTEEECGGGT-----CCCCGGGSCHHHHHHHHHHHHHHHHH
T ss_pred eeEEeeEecCCCCceecCCEEEEEccc-----ccCCcchhhhHHHHHHHHHHHHHHHh
Confidence 0011112 22334556677543 45667789999999999999999994
No 28
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.70 E-value=6.4e-16 Score=151.68 Aligned_cols=202 Identities=14% Similarity=0.026 Sum_probs=123.7
Q ss_pred ccceeEehHHHHHHHHHHHHhhcCcEEEEceEEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHH-hhhccc--
Q 014198 181 QTTAQVHPQLFTKTLLNKAVNDYGLEVVIGKVERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFE-LLASMF-- 257 (429)
Q Consensus 181 ~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~-~~~~~~-- 257 (429)
.....+++..+.+.|.+.+ .+.|+++++++|+++..++++.+..|++.+|.+++||.||.|+|.++..+. .++...
T Consensus 165 ~~~~~~~~~~l~~~L~~~a-~~~gv~~~~~~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~~g~~~~~ 243 (511)
T 2weu_A 165 PYAYHFDADEVARYLSEYA-IARGVRHVVDDVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLLINQTLGGRFQS 243 (511)
T ss_dssp SCEEEECHHHHHHHHHHHH-HHTTCEEEECCEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCCCCCCTCCCEEE
T ss_pred CeeEEEcHHHHHHHHHHHH-HHCCCEEEECeEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCCCcc
Confidence 4567899999999999999 778999999888999876466777788888878999999999999987654 344332
Q ss_pred --ccccce-eeEEEecCCCCCCCCCceeEeeeccCCCCCCCCCCCceEecCCCcEEEeccCCCCCCCCCCCCCCCCHHHH
Q 014198 258 --RVSGLK-AHSIILEPKEADAITPHALFLSYYPAQGEGGKPMDPEVYPRPTGEVYLCGMSSEQEVPDDPETVSGDPASI 334 (429)
Q Consensus 258 --~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~g~~~~~~~~~~~~~~~~~~~~~ 334 (429)
+..+.. ...+.+.........+.... ... . .+..+++|..++ .. .|..... . ...+++..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~------~g~~~~~P~~~~-~~-~g~~~~~----~---~~~~~~~~ 306 (511)
T 2weu_A 244 FSDVLPNNRAVALRVPRENDEDMRPYTTA-TAM-S------AGWMWTIPLFKR-DG-NGYVYSD----E---FISPEEAE 306 (511)
T ss_dssp CTTTCCCCEEEEEEEECSSGGGCCSSEEE-EEE-T------TEEEEEEECSSE-EE-EEEEECT----T---TSCHHHHH
T ss_pred ccccCcccceEEEEeccCCCCCCCcceec-eec-C------CCcEEEEECCCc-eE-EEEEECC----C---CCCHHHHH
Confidence 112222 22222222110002222111 110 1 112345566653 22 2221110 0 01122333
Q ss_pred HHHHHHHHHhccccCcccccceeeeeecccC-CCCCceeccCCCCCcEEEEecCCCccchhhHHHHHHHHHHHh
Q 014198 335 QVLKRVARTVSSHLGEEAQVKAEQACFLPCT-DDGVPVIGELPGIKGCYVGTGHNCWGILNGPATGAALAELVM 407 (429)
Q Consensus 335 ~~l~~~~~~~~p~l~~~~~~~~~~~g~r~~t-~d~~p~ig~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~ 407 (429)
+.+.+.+ ...|.+.+ ...+..|.+.++.. .++.+++|... .....+.|+|+.+|+..|..|++.|.
T Consensus 307 ~~l~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~rv~liGDAA-----h~~~P~~g~G~~~a~~da~~La~~l~ 373 (511)
T 2weu_A 307 RELRSTV-APGRDDLE-ANHIQMRIGRNERTWINNCVAVGLSA-----AFVEPLESTGIFFIQHAIEQLVKHFP 373 (511)
T ss_dssp HHHHHHH-CTTCTTSC-CEEEECCCEEESCSEETTEEECGGGT-----EECCGGGCCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHh-Cccccccc-ceeEEeeccccccccCCCEEEEechh-----hccCccccccHHHHHHHHHHHHHHhc
Confidence 4444443 22344444 45556777777653 47888899654 56678899999999999999999984
No 29
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.69 E-value=1.2e-15 Score=150.62 Aligned_cols=291 Identities=16% Similarity=0.080 Sum_probs=149.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHH--HHHhCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSL--AEELNG 129 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~ 129 (429)
+.+||+|||||++|+++|+.|+++|++|+||||....... .+. ..+...+.++++++ .+.+..
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~-~r~--------------~~l~~~s~~~l~~lGl~~~l~~ 112 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGH-DRA--------------GALHIRTVETLDLRGLLDRFLE 112 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCS-SSC--------------CCBCHHHHHHHHTTTCHHHHTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCC-ceE--------------EEECHHHHHHHHHcCChHHHHh
Confidence 4689999999999999999999999999999998732211 111 11223333444332 111111
Q ss_pred CCCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEE
Q 014198 130 PDNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVI 209 (429)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~ 209 (429)
. .....+.. + .......++... .....+....+++..+.+.|.+.+ ++.|++|++
T Consensus 113 ~---~~~~~~~~-~----------------~~~~~~~~~~~~----~~~~~~~~~~i~~~~l~~~L~~~a-~~~gv~i~~ 167 (570)
T 3fmw_A 113 G---TQVAKGLP-F----------------AGIFTQGLDFGL----VDTRHPYTGLVPQSRTEALLAEHA-REAGAEIPR 167 (570)
T ss_dssp S---CCBCSBCC-B----------------TTBCTTCCBGGG----SCCSCCSBBCCCHHHHHHHHHHHH-HHHTEECCB
T ss_pred c---CcccCCce-e----------------CCcccccccccc----cCCCCCeeEEeCHHHHHHHHHHHH-HhCCCEEEe
Confidence 0 00000000 0 000000000000 001123445688999999999999 778999999
Q ss_pred ce-EEEEEEccCCcEEEEEE--eCC-eEEEcCEEEEcCCCCchHHHhhhcccccccceeeEEEecCCCCCCCCCceeEee
Q 014198 210 GK-VERVGVGEGGRVESVMI--EGG-RVVESDAVVLALGPWSGKFELLASMFRVSGLKAHSIILEPKEADAITPHALFLS 285 (429)
Q Consensus 210 ~~-v~~i~~~~~g~v~~v~~--~~g-~~i~ad~vV~a~G~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (429)
++ |++++.+ ++.+. |++ .+| .+++||.||.|+|.+|.....++...+........+...... ...... ..
T Consensus 168 ~~~v~~l~~~-~~~v~-v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~lGi~~~~~~~~~~~~~~~v~~--~~~~~~--~~ 241 (570)
T 3fmw_A 168 GHEVTRLRQD-AEAVE-VTVAGPSGPYPVRARYGVGCDGGRSTVRRLAADRFPGTEATVRALIGYVTT--PEREVP--RR 241 (570)
T ss_dssp SCEEEECCBC-SSCEE-EEEEETTEEEEEEESEEEECSCSSCHHHHHTTCCCCCCCCCEEEEEEECCC--CSCSSC--CC
T ss_pred CCEEEEEEEc-CCeEE-EEEEeCCCcEEEEeCEEEEcCCCCchHHHHcCCCCccceeeeEEEEEEEEe--cCCCcc--eE
Confidence 99 9999987 44443 555 566 689999999999999965556776666555444444433222 111101 11
Q ss_pred eccCCCCCCCCCCCce--EecCCCcE-EE-eccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhccccCcccccceeeeee
Q 014198 286 YYPAQGEGGKPMDPEV--YPRPTGEV-YL-CGMSSEQEVPDDPETVSGDPASIQVLKRVARTVSSHLGEEAQVKAEQACF 361 (429)
Q Consensus 286 ~~~~~~~~~~~~~~~~--~~~~~g~~-~i-~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~~~~~~~~~g~ 361 (429)
+. .. ..+..+ +|.+++.. .+ +...... ........+ .+.+.+.+.+.++..-...... .|...
T Consensus 242 ~~--~~----~~G~~~~~~P~~~g~~~~i~~~~~~~~---~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~-~~~~~ 308 (570)
T 3fmw_A 242 WE--RT----PDGILVLAFPPEGGLGPGWSSSSTGHS---PAADEGPVT---LEDLGAAVARVRGTPLTLTEPV-SWLSR 308 (570)
T ss_dssp CC--CC----CSSCEEECCCC------CEEEEEESCC--------CCCC---HHHHHHHTTSSSSCCCCCCSCC-EEEEE
T ss_pred EE--ec----CCEEEEEEeecCCCeEEEEEEEeCCCC---ccccccCCC---HHHHHHHHHHHhhcccccceee-eeeEE
Confidence 10 11 112233 47777643 22 2211111 011111222 3455555666555321101111 12222
Q ss_pred cc--------cCCCCCceeccCCCCCcEEEEecCCCccchhhHHHHHHHHHHH
Q 014198 362 LP--------CTDDGVPVIGELPGIKGCYVGTGHNCWGILNGPATGAALAELV 406 (429)
Q Consensus 362 r~--------~t~d~~p~ig~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i 406 (429)
++ +..++..++|.. .+....++|+|+.++..-|..|+..|
T Consensus 309 ~~~~~~~a~~~~~grv~LvGDA-----AH~~~P~~GqG~n~gl~DA~~La~~L 356 (570)
T 3fmw_A 309 FGDASRQAKRYRSGRVLLAGDA-----AHVHFPIGGQGLNTGLQDAVNLGWKL 356 (570)
T ss_dssp ECCCCEECSCSEETTEEECGGG-----TEECCCCSSCHHHHHHHHHHHHHHHH
T ss_pred eecccccccccccCCEEEEEec-----ceecCCCcCcCHhHHHHHHHHHHHHH
Confidence 22 234455667754 36677788888888877666665555
No 30
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.67 E-value=2e-15 Score=147.86 Aligned_cols=170 Identities=19% Similarity=0.156 Sum_probs=101.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPD 131 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 131 (429)
.++||+|||||++|+++|+.|+++|++|+|||+...+....+ ..+.+.. .....+.+.+++.+.. ..
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g---~~~~~~~------~~~~l~~lgl~~~~~~-~~--- 72 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIG---ESLLPAT------VHGICAMLGLTDEMKR-AG--- 72 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSC---CBCCHHH------HTTHHHHTTCHHHHHT-TT---
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCC---cccCcch------HHHHHHHhCcHHHHHH-cC---
Confidence 358999999999999999999999999999999974321111 1111100 0001111122222211 11
Q ss_pred CcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce
Q 014198 132 NYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK 211 (429)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~ 211 (429)
+.......+......... .+.+. ............+++..+.+.|.+.+ ++.|+++++++
T Consensus 73 -~~~~~~~~~~~~~~~~~~------------~~~~~------~~~~~~~~~~~~v~r~~l~~~L~~~a-~~~Gv~i~~~~ 132 (512)
T 3e1t_A 73 -FPIKRGGTFRWGKEPEPW------------TFGFT------RHPDDPYGFAYQVERARFDDMLLRNS-ERKGVDVRERH 132 (512)
T ss_dssp -CCEECEEEEECSSCSSCE------------EEESS------SSSSSTTCCEEBCCHHHHHHHHHHHH-HHTTCEEESSC
T ss_pred -CccccCceEEecCCcccc------------ccccc------cCCCCCcceeeEecHHHHHHHHHHHH-HhCCCEEEcCC
Confidence 111111111110000000 00000 00011224456789999999999999 77899999999
Q ss_pred -EEEEEEccCCcEEEEEEe--CC--eEEEcCEEEEcCCCCchHHHhhhc
Q 014198 212 -VERVGVGEGGRVESVMIE--GG--RVVESDAVVLALGPWSGKFELLAS 255 (429)
Q Consensus 212 -v~~i~~~~~g~v~~v~~~--~g--~~i~ad~vV~a~G~~s~~~~~~~~ 255 (429)
|+++..+ ++++.+|.+. +| .+++||.||.|+|.++.....++.
T Consensus 133 ~V~~v~~~-~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~vr~~lg~ 180 (512)
T 3e1t_A 133 EVIDVLFE-GERAVGVRYRNTEGVELMAHARFIVDASGNRTRVSQAVGE 180 (512)
T ss_dssp EEEEEEEE-TTEEEEEEEECSSSCEEEEEEEEEEECCCTTCSSGGGTCC
T ss_pred EEEEEEEE-CCEEEEEEEEeCCCCEEEEEcCEEEECCCcchHHHHHcCC
Confidence 9999987 7777666654 45 389999999999999976665543
No 31
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.67 E-value=2.4e-15 Score=148.33 Aligned_cols=175 Identities=19% Similarity=0.143 Sum_probs=101.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHH------HH
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSL------AE 125 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~------~~ 125 (429)
.++||+|||||++|+++|+.|+++|++|+||||....... .+. ..+...+.++++++ ..
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~-~~~--------------~~l~~~~~~~l~~lGl~~~~~~ 68 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPY-PRA--------------AGQNPRTMELLRIGGVADEVVR 68 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCC-CCS--------------CCBCHHHHHHHHHTTCHHHHHH
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCC-Ccc--------------ceECHHHHHHHHHcCCHHHHHh
Confidence 4689999999999999999999999999999998732111 111 11223333444432 21
Q ss_pred HhCCCCCcCeeeeeeeE--EeecccccCCCCCccccCCCCCCCCCCCCCC--CCccC-ccccceeEehHHHHHHHHHHHH
Q 014198 126 ELNGPDNYGYRALTTLS--LTVTESQQSGSKPSNKANSLIPSWVDGPARS--PTTIG-STQTTAQVHPQLFTKTLLNKAV 200 (429)
Q Consensus 126 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g-~~~~~~~~~~~~l~~~l~~~~~ 200 (429)
.+.. ......+. ...... +..+..+...... ..... .......++...+.+.|.+.+
T Consensus 69 -~~~~----~~~~~~~~~~~~~~~~------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a- 130 (535)
T 3ihg_A 69 -ADDI----RGTQGDFVIRLAESVR------------GEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQA- 130 (535)
T ss_dssp -SCCS----SCTTSCCEEEEESSSS------------SCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHH-
T ss_pred -hCCC----cccccceeeeEEeccC------------CceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHH-
Confidence 1110 00000000 000000 0000000000000 00000 012245678889999999999
Q ss_pred hhcCcEEEEce-EEEEEEccCC---cEEEEEEeCC---eEEEcCEEEEcCCCCchHHHhhhcccccc
Q 014198 201 NDYGLEVVIGK-VERVGVGEGG---RVESVMIEGG---RVVESDAVVLALGPWSGKFELLASMFRVS 260 (429)
Q Consensus 201 ~~~Gv~v~~~~-v~~i~~~~~g---~v~~v~~~~g---~~i~ad~vV~a~G~~s~~~~~~~~~~~~~ 260 (429)
++.|+++++++ |++++.++++ .+ .+++.++ .+++||.||.|+|.+|.....++...+..
T Consensus 131 ~~~gv~i~~~~~v~~i~~~~~~~~~~v-~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~ 196 (535)
T 3ihg_A 131 RKHGGAIRFGTRLLSFRQHDDDAGAGV-TARLAGPDGEYDLRAGYLVGADGNRSLVRESLGIGRYGH 196 (535)
T ss_dssp HHTTCEEESSCEEEEEEEECGGGCSEE-EEEEEETTEEEEEEEEEEEECCCTTCHHHHHTTCCEEEE
T ss_pred HhCCCEEEeCCEEEEEEECCCCccccE-EEEEEcCCCeEEEEeCEEEECCCCcchHHHHcCCCcCCC
Confidence 77899999999 9999987332 43 3555555 68999999999999996555666544433
No 32
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.66 E-value=2.3e-14 Score=142.11 Aligned_cols=165 Identities=19% Similarity=0.216 Sum_probs=99.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC------CCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHH-HHHHHH
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKK------GAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFN-LHRSLA 124 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~------G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~-~~~~~~ 124 (429)
+++||+|||||++|+++|+.|+++ |++|+||||....++. ..+++.+.+. +++ ++..+.
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~-~~~g~~l~~~-------------~l~~ll~~~~ 99 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAH-TLSGACLDPR-------------AFEELFPDWK 99 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTT-CCCCCEECTH-------------HHHHHCTTHH
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCc-cccccccCHH-------------HHHHHHHHHH
Confidence 468999999999999999999998 9999999998732221 1223333221 111 111121
Q ss_pred HHhCCCCCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcC
Q 014198 125 EELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYG 204 (429)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~G 204 (429)
. .+.......... .+.+...... ..+........ .......++...+.+.|.+.+ ++.|
T Consensus 100 ~-~g~~~~~~~~~~-~~~~~~~~~~------------~~~~~~~~~~~------~~~~~~~v~r~~l~~~L~~~a-~~~G 158 (584)
T 2gmh_A 100 E-KGAPLNTPVTED-RFGILTEKYR------------IPVPILPGLPM------NNHGNYVVRLGHLVSWMGEQA-EALG 158 (584)
T ss_dssp H-HTCCCCEECCEE-EEEEECSSCE------------EECCCCTTSTT------CCTTCEECCHHHHHHHHHHHH-HHTT
T ss_pred h-cCCceeeeechh-heeeeccCCC------------ccccccCcccc------ccCCCEEEeHHHHHHHHHHHH-HHcC
Confidence 1 121110000000 0111000000 00000000000 012346678899999999999 7889
Q ss_pred cEEEEce-EEEEEEccCCcEEEEEEeC------C---------eEEEcCEEEEcCCCCchHHH
Q 014198 205 LEVVIGK-VERVGVGEGGRVESVMIEG------G---------RVVESDAVVLALGPWSGKFE 251 (429)
Q Consensus 205 v~v~~~~-v~~i~~~~~g~v~~v~~~~------g---------~~i~ad~vV~a~G~~s~~~~ 251 (429)
++|++++ |+++..++++++.+|.+.+ | .+++||.||+|+|.++....
T Consensus 159 v~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~ 221 (584)
T 2gmh_A 159 VEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAK 221 (584)
T ss_dssp CEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHH
T ss_pred CEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchHHH
Confidence 9999999 9999987457787787753 3 58999999999999997543
No 33
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.64 E-value=5.4e-15 Score=145.81 Aligned_cols=202 Identities=14% Similarity=0.024 Sum_probs=117.3
Q ss_pred cccceeEehHHHHHHHHHHHHhhcCcEEEEceEEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHH-hhhcccc
Q 014198 180 TQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGKVERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFE-LLASMFR 258 (429)
Q Consensus 180 ~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~-~~~~~~~ 258 (429)
.+..+.+++..+.+.|.+.+ ++.|++++.++|+++..++++.++.|.+.+|.+++||.||+|+|.++..+. .++....
T Consensus 156 ~~~~~~i~~~~l~~~L~~~a-~~~gv~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~lg~~~~ 234 (538)
T 2aqj_A 156 MSHAWHFDAHLVADFLKRWA-VERGVNRVVDEVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLLINQALKEPFI 234 (538)
T ss_dssp SCCEEEECHHHHHHHHHHHH-HHTTCEEEECCEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCCCCCCTCCCEE
T ss_pred CCccEEEeHHHHHHHHHHHH-HHCCCEEEEeeEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhhHHHHhCCCcc
Confidence 35578899999999999999 778999998889999876466667788878878999999999999987644 3333221
Q ss_pred c----ccc-eeeEEEecCCCC-CCCCCceeEeeeccCCCCCCCCCCCceEecCCCcEEEeccCCCCCCCCCCCCCCCCHH
Q 014198 259 V----SGL-KAHSIILEPKEA-DAITPHALFLSYYPAQGEGGKPMDPEVYPRPTGEVYLCGMSSEQEVPDDPETVSGDPA 332 (429)
Q Consensus 259 ~----~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~g~~~~~~~~~~~~~~~~~~~ 332 (429)
. .+. ....+.+..... ....+...... .. .+..+++|..++ ..+ |..... . ...+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------~g~~~~~p~~~~-~~~-g~v~~~----~---~~~~~~ 297 (538)
T 2aqj_A 235 DMSDYLLCDSAVASAVPNDDARDGVEPYTSSIA--MN------SGWTWKIPMLGR-FGS-GYVFSS----H---FTSRDQ 297 (538)
T ss_dssp ECTTTCCCCEEEEEEEECCHHHHCCCSSEEEEE--CS------SEEEEEEEETTE-EEE-EEEECT----T---TSCHHH
T ss_pred ccccccccceEEEEecccCCcccCCCCceeeee--cC------CceEEEecCCCc-eEE-EEEEcC----C---CCChHH
Confidence 1 111 111112221110 00112111111 00 112345566554 222 221110 0 011223
Q ss_pred HHHHHHHHHHHhccccCcccccceeeeeecc-cCCCCCceeccCCCCCcEEEEecCCCccchhhHHHHHHHHHHHh
Q 014198 333 SIQVLKRVARTVSSHLGEEAQVKAEQACFLP-CTDDGVPVIGELPGIKGCYVGTGHNCWGILNGPATGAALAELVM 407 (429)
Q Consensus 333 ~~~~l~~~~~~~~p~l~~~~~~~~~~~g~r~-~t~d~~p~ig~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~ 407 (429)
..+.+.+.+.. .| +.+ ......+.+.++ ...++..++|... .....+.|.|+.+|...|..|++.|.
T Consensus 298 ~~~~l~~~~~~-~~-~~~-~~~~~~~~~~~~~~~~grvvliGDAA-----h~~~P~~gqG~~~a~~da~~La~~L~ 365 (538)
T 2aqj_A 298 ATADFLKLWGL-SD-NQP-LNQIKFRVGRNKRAWVNNCVSIGLSS-----CFLEPLESTGIYFIYAALYQLVKHFP 365 (538)
T ss_dssp HHHHHHHHHTC-CT-TCC-CEEEECCCEEESCSEETTEEECGGGT-----EECCGGGSCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhcC-CC-CCC-ceEEeeccccccccccCCEEEEcccc-----cccCcchhccHHHHHHHHHHHHHHhh
Confidence 33444443322 12 223 334455555544 3456667788543 66788899999999999999999884
No 34
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.63 E-value=2.6e-15 Score=142.69 Aligned_cols=167 Identities=17% Similarity=0.185 Sum_probs=99.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDN 132 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 132 (429)
++||+|||||++|+++|+.|+++|++|+|+|+.... .....+..+.+. .....+.+.+++.+.. ... .
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~--~~~~~~~~l~~~-------~~~~l~~~g~~~~~~~-~~~--~ 73 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE--RAINGADLLKPA-------GIRVVEAAGLLAEVTR-RGG--R 73 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC-----CCCCEECHH-------HHHHHHHTTCHHHHHH-TTC--E
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC--CccCceeeECch-------HHHHHHHcCcHHHHHH-hCC--C
Confidence 579999999999999999999999999999998622 111111111110 0000111112222221 111 0
Q ss_pred cCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhc-CcEEEEce
Q 014198 133 YGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDY-GLEVVIGK 211 (429)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~-Gv~v~~~~ 211 (429)
. ..+.+....... ...++... .........+++..+.+.|.+.+ ++. |+++++++
T Consensus 74 --~---~~~~~~~~~g~~-------------~~~~~~~~-----~~~~~~~~~~~r~~l~~~L~~~~-~~~~gv~i~~~~ 129 (399)
T 2x3n_A 74 --V---RHELEVYHDGEL-------------LRYFNYSS-----VDARGYFILMPCESLRRLVLEKI-DGEATVEMLFET 129 (399)
T ss_dssp --E---ECEEEEEETTEE-------------EEEEETTS-----SCGGGCEEECCHHHHHHHHHHHH-TTCTTEEEECSC
T ss_pred --c---ceeEEEeCCCCE-------------EEecchHH-----hcccCccccccHHHHHHHHHHHh-hhcCCcEEEcCC
Confidence 1 011111100000 00000000 00112346788999999999999 776 99999999
Q ss_pred -EEEEEEccCCcEE-EEEEeCCeEEEcCEEEEcCCCCchHHHhhhcc
Q 014198 212 -VERVGVGEGGRVE-SVMIEGGRVVESDAVVLALGPWSGKFELLASM 256 (429)
Q Consensus 212 -v~~i~~~~~g~v~-~v~~~~g~~i~ad~vV~a~G~~s~~~~~~~~~ 256 (429)
|++++.+ ++.+. .|++.+|.+++||.||.|+|.++.....++..
T Consensus 130 ~v~~i~~~-~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~lg~~ 175 (399)
T 2x3n_A 130 RIEAVQRD-ERHAIDQVRLNDGRVLRPRVVVGADGIASYVRRRLLDI 175 (399)
T ss_dssp CEEEEEEC-TTSCEEEEEETTSCEEEEEEEEECCCTTCHHHHHTSCC
T ss_pred EEEEEEEc-CCceEEEEEECCCCEEECCEEEECCCCChHHHHHhCCC
Confidence 9999987 45543 57787888999999999999999855455543
No 35
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.62 E-value=4.3e-15 Score=147.25 Aligned_cols=164 Identities=19% Similarity=0.191 Sum_probs=106.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccC-------CCCcchh-------------
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWC-------DGGPLSS------------- 111 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~-------~~~~~~~------------- 111 (429)
.++||+|||||++|+++|+.|+++|++|+||||....+++|..++|.++.... .......
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~ 199 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQN 199 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 46899999999999999999999999999999999777888777777754221 0000000
Q ss_pred -------hhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccce
Q 014198 112 -------LARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTA 184 (429)
Q Consensus 112 -------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 184 (429)
+...+.+.++. ....+.. + .. +.............+..+
T Consensus 200 ~~~~~~~~~~~~~~~i~~-l~~~Gv~--~--~~-----------------------------~~~~~g~~~~r~~~~~~~ 245 (566)
T 1qo8_A 200 DIKLVTILAEQSADGVQW-LESLGAN--L--DD-----------------------------LKRSGGARVDRTHRPHGG 245 (566)
T ss_dssp CHHHHHHHHHHHHHHHHH-HHHTTCC--C--CE-----------------------------EECCTTCSSCCEEECSSS
T ss_pred CHHHHHHHHhccHHHHHH-HHhcCCc--c--cc-----------------------------ccccCCCCCCceeecCCC
Confidence 00011111111 1112221 0 00 000000000000112234
Q ss_pred eEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccC-CcEEEEEEe--CCe--EEEcCEEEEcCCCCchHHH
Q 014198 185 QVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEG-GRVESVMIE--GGR--VVESDAVVLALGPWSGKFE 251 (429)
Q Consensus 185 ~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~-g~v~~v~~~--~g~--~i~ad~vV~a~G~~s~~~~ 251 (429)
.+++..+++.|.+.+ ++.|++|++++ |++|..+ + ++|.+|++. +|+ +++||.||+|||+++.+..
T Consensus 246 ~~~~~~l~~~L~~~~-~~~gv~i~~~~~v~~l~~~-~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~~~ 316 (566)
T 1qo8_A 246 KSSGPEIIDTLRKAA-KEQGIDTRLNSRVVKLVVN-DDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMNKE 316 (566)
T ss_dssp SCHHHHHHHHHHHHH-HHTTCCEECSEEEEEEEEC-TTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTCHH
T ss_pred CCCHHHHHHHHHHHH-HhcCCEEEeCCEEEEEEEC-CCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccCHH
Confidence 456788999999999 88899999999 9999987 5 888888776 564 6899999999999997643
No 36
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.61 E-value=1.3e-14 Score=143.39 Aligned_cols=201 Identities=14% Similarity=0.021 Sum_probs=115.1
Q ss_pred ccceeEehHHHHHHHHHHHHhhc-CcEEEEceEEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHH-hhhcccc
Q 014198 181 QTTAQVHPQLFTKTLLNKAVNDY-GLEVVIGKVERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFE-LLASMFR 258 (429)
Q Consensus 181 ~~~~~~~~~~l~~~l~~~~~~~~-Gv~v~~~~v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~-~~~~~~~ 258 (429)
.....+++..+.+.|.+.+ ++. |++++++.|+++..++++.+..|.+.+|.+++||.||+|+|.++..+. .++....
T Consensus 186 ~~~~~~~~~~l~~~L~~~~-~~~~Gv~i~~~~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~~~~~lg~~~~ 264 (550)
T 2e4g_A 186 NYAWHFDAHLVADFLRRFA-TEKLGVRHVEDRVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLLINKAMEEPFL 264 (550)
T ss_dssp CCEEEECHHHHHHHHHHHH-HHHSCCEEEECCEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCCCCCCTCCCEE
T ss_pred CcceEEcHHHHHHHHHHHH-HhcCCcEEEECeEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhhHHHHhCCCcc
Confidence 3457799999999999999 777 999999889999876466777788888888999999999999987644 3333211
Q ss_pred ----cccc-eeeEEEecCCCC-CCCCCceeEeeeccCCCCCCCCCCCceEecCCCcEEEeccCCCCCCCCCCCCCCCCHH
Q 014198 259 ----VSGL-KAHSIILEPKEA-DAITPHALFLSYYPAQGEGGKPMDPEVYPRPTGEVYLCGMSSEQEVPDDPETVSGDPA 332 (429)
Q Consensus 259 ----~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~g~~~~~~~~~~~~~~~~~~~ 332 (429)
..+. ....+.+..... ....+...... ... ...+++|.++. .. .|..... ...+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------g~~~~ipl~~~-~~-~g~v~~~--------~~~~~~ 326 (550)
T 2e4g_A 265 DMSDHLLNDSAVATQVPHDDDANGVEPFTSAIA--MKS------GWTWKIPMLGR-FG-TGYVYSS--------RFATED 326 (550)
T ss_dssp ECTTTCCCCEEEEEEEECCHHHHCCCSSEEEEE--CSS------EEEEEEECSSE-EE-EEEEECT--------TTSCHH
T ss_pred cccccccccceEEEeecccCCcccCCCceeeee--cCC------ceEEEccCCCc-cc-eEEEEec--------CCCChH
Confidence 0111 111111211110 00111111111 001 11234565542 21 1211110 011233
Q ss_pred HH-HHHHHHHHHhccccCcccccceeeeeecc-cCCCCCceeccCCCCCcEEEEecCCCccchhhHHHHHHHHHHHh
Q 014198 333 SI-QVLKRVARTVSSHLGEEAQVKAEQACFLP-CTDDGVPVIGELPGIKGCYVGTGHNCWGILNGPATGAALAELVM 407 (429)
Q Consensus 333 ~~-~~l~~~~~~~~p~l~~~~~~~~~~~g~r~-~t~d~~p~ig~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~ 407 (429)
.. +.+.+.+ ...|.+.+ ......+.+.++ ...++..++|... .....+.|+|+.++...|..|++.|.
T Consensus 327 ~~~~~l~~~~-~~~p~l~~-~~~i~~~~~~~~~~~~~rvvliGDAA-----h~~~P~~GqGi~~a~~da~~La~~L~ 396 (550)
T 2e4g_A 327 EAVREFCEMW-HLDPETQP-LNRIRFRVGRNRRAWVGNCVSIGTSS-----CFVEPLESTGIYFVYAALYQLVKHFP 396 (550)
T ss_dssp HHHHHHHHHT-TCCTTTSC-CEEEECCCEEESCSEETTEEECSTTT-----EECCGGGSCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhh-CcCcccCC-CceEEecCCCccccccCCEEEEehhh-----cccCccchhhHHHHHHHHHHHHHhcc
Confidence 32 3333333 22233433 334445556555 3456667777543 55567889999999999999999884
No 37
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.61 E-value=1.2e-14 Score=144.27 Aligned_cols=165 Identities=21% Similarity=0.244 Sum_probs=104.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCC-------CCcchh-------------
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCD-------GGPLSS------------- 111 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~-------~~~~~~------------- 111 (429)
.++||+|||||++|+++|+.|+++|++|+||||....++.|..++|.++..... ......
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIN 204 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 368999999999999999999999999999999997777777777666532110 000000
Q ss_pred -------hhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccce
Q 014198 112 -------LARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTA 184 (429)
Q Consensus 112 -------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 184 (429)
+...+.+....+ .+.+... .. +.. ...... . ....+..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~l-~~~Gv~~----~~-----~~~---------------------~~g~~~-~--r~~~~~~g 250 (571)
T 1y0p_A 205 DPALVKVLSSHSKDSVDWM-TAMGADL----TD-----VGM---------------------MGGASV-N--RAHRPTGG 250 (571)
T ss_dssp CHHHHHHHHHHHHHHHHHH-HHTTCCC----CE-----EEC---------------------CTTCSS-C--CEEESTTT
T ss_pred CHHHHHHHHHccHHHHHHH-HhcCCCC----cc-----Ccc---------------------cCCcCC-C--eeEecCCC
Confidence 011111111111 1122210 00 000 000000 0 00112223
Q ss_pred eEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEe--CCe--EEEcCEEEEcCCCCchHHH
Q 014198 185 QVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIE--GGR--VVESDAVVLALGPWSGKFE 251 (429)
Q Consensus 185 ~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~--~g~--~i~ad~vV~a~G~~s~~~~ 251 (429)
...+..+.+.|.+.+ ++.|++|++++ |++|..++++++.+|.+. +|+ +++||.||+|+|+++.+..
T Consensus 251 ~~~g~~l~~~L~~~~-~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~n~~ 321 (571)
T 1y0p_A 251 AGVGAHVVQVLYDNA-VKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAKNNE 321 (571)
T ss_dssp CCHHHHHHHHHHHHH-HHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHH
T ss_pred CCCHHHHHHHHHHHH-HhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcccCHH
Confidence 456788999999999 88899999999 999998733888888776 464 6899999999999987543
No 38
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.61 E-value=1.8e-14 Score=136.62 Aligned_cols=162 Identities=17% Similarity=0.196 Sum_probs=94.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDN 132 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 132 (429)
++||+|||||++|+++|+.|+++|++|+|+|+.......+....+.+.+ .+.+++++ ++....
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~-------------~~~~~l~~----lg~~~~ 64 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQ-------------GMVDLLRE----AGVDRR 64 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECH-------------HHHHHHHH----TTCCHH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECH-------------HHHHHHHH----cCCcHH
Confidence 4799999999999999999999999999999987321111111222322 12222222 221100
Q ss_pred c---CeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEE
Q 014198 133 Y---GYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVI 209 (429)
Q Consensus 133 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~ 209 (429)
+ ... ...+.+....... .++. ... ........++...+.+.|.+.+ .+.|+++++
T Consensus 65 ~~~~~~~-~~~~~~~~~~~~~---------------~~~~----~~~-~~~~~~~~~~~~~l~~~L~~~~-~~~g~~i~~ 122 (394)
T 1k0i_A 65 MARDGLV-HEGVEIAFAGQRR---------------RIDL----KRL-SGGKTVTVYGQTEVTRDLMEAR-EACGATTVY 122 (394)
T ss_dssp HHHHCEE-ESCEEEEETTEEE---------------EECH----HHH-HTSCCEEECCHHHHHHHHHHHH-HHTTCEEES
T ss_pred HHhcCCc-cceEEEEECCceE---------------Eecc----ccc-cCCCceEEechHHHHHHHHHHH-HhcCCeEEe
Confidence 0 000 0001111100000 0000 000 0001234456678888999998 777999999
Q ss_pred ce-EEEEEEccCCcEEEEEE-eCCe--EEEcCEEEEcCCCCchHHHhhh
Q 014198 210 GK-VERVGVGEGGRVESVMI-EGGR--VVESDAVVLALGPWSGKFELLA 254 (429)
Q Consensus 210 ~~-v~~i~~~~~g~v~~v~~-~~g~--~i~ad~vV~a~G~~s~~~~~~~ 254 (429)
++ |++++.++++.+ .|++ .+|. +++||.||.|+|.+|.....++
T Consensus 123 ~~~v~~i~~~~~~~~-~v~~~~~g~~~~~~a~~vV~AdG~~S~vr~~l~ 170 (394)
T 1k0i_A 123 QAAEVRLHDLQGERP-YVTFERDGERLRLDCDYIAGCDGFHGISRQSIP 170 (394)
T ss_dssp SCEEEEEECTTSSSC-EEEEEETTEEEEEECSEEEECCCTTCSTGGGSC
T ss_pred ceeEEEEEEecCCce-EEEEecCCcEEEEEeCEEEECCCCCcHHHHhcC
Confidence 99 999987522333 4666 6776 7999999999999998554443
No 39
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.59 E-value=1.9e-14 Score=140.89 Aligned_cols=191 Identities=20% Similarity=0.215 Sum_probs=105.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeecc--------CCCCcc-------------
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDW--------CDGGPL------------- 109 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~--------~~~~~~------------- 109 (429)
+.++||||||+|++|+++|+.|+++|++|+||||....+|+|..++|.++... ......
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s~~s~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~ 118 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGATALAGGFIYLGGGTPLQKACGFDDSPENMKTFMMAALGP 118 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGSCCCEECCSSCHHHHHTTCCCCHHHHHHHHHHHSCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcchhcCcceecCCCCHHHHHhCCCCCHHHHHHHHHHHhCC
Confidence 45689999999999999999999999999999999977788888887765311 001110
Q ss_pred -------hhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCcc--
Q 014198 110 -------SSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGST-- 180 (429)
Q Consensus 110 -------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-- 180 (429)
..+...+.+.++.+ .+.+......+.....+. .... . ..........+-..........+..
T Consensus 119 ~~~~~~~~~~~~~~~~~i~~l-~~~Gv~~~~~~~~~~~~~----~~~~---~-~~~~~g~e~~~~~~~~~~~~~r~~~~~ 189 (510)
T 4at0_A 119 GADEEKITDYCEGSVEHYNWL-VDCGVPFKESFWGEPGWE----PPFD---D-GLMYSGGENAAPFNEIAAPAPRGHVPQ 189 (510)
T ss_dssp SCCHHHHHHHHHTHHHHHHHH-HHTTCCCCSCEECSSSSS----CSSS---C-SEECCSSTTSTTGGGTSCCCCCEECCC
T ss_pred CCCHHHHHHHHHhhHHHHHHH-HHcCCeecccccCCcccc----cCCc---c-cccccCcccccccccccCcccceeeec
Confidence 01111111122211 222221110000000000 0000 0 0000000000000000000000000
Q ss_pred ---ccceeEehH-HHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCC-e--EEEcC-EEEEcCCCCchHHH
Q 014198 181 ---QTTAQVHPQ-LFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGG-R--VVESD-AVVLALGPWSGKFE 251 (429)
Q Consensus 181 ---~~~~~~~~~-~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g-~--~i~ad-~vV~a~G~~s~~~~ 251 (429)
...+..... .+.+.|.+.+ ++.|++|++++ |++|..+++++|.+|.+.++ + +|+|+ .||+|||+++.+..
T Consensus 190 ~~~~~~g~~~g~~~l~~~L~~~~-~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~n~~ 268 (510)
T 4at0_A 190 MDGKRTGEKGGGYMLMKPLVETA-EKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFAYNDK 268 (510)
T ss_dssp CSSCBTTTBCTTHHHHHHHHHHH-HHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCTTCHH
T ss_pred ccccccccCCCHHHHHHHHHHHH-HHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChhhCHH
Confidence 002223344 8899999999 78899999999 99999875688888877643 2 58995 99999999986444
No 40
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.58 E-value=2.8e-14 Score=134.53 Aligned_cols=154 Identities=22% Similarity=0.252 Sum_probs=95.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHH--HHHhCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSL--AEELNGP 130 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~ 130 (429)
.+||+|||||++|+++|+.|+++|++|+|+|+....... ..+.. +...+.+.++++ .+++...
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~---~~~~~------------l~~~~~~~l~~~g~~~~~~~~ 75 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAF---GAGIY------------LWHNGLRVLEGLGALDDVLQG 75 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCC---SSEEE------------EEHHHHHHHHHTTCHHHHHTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCC---CceEE------------eCccHHHHHHHcCCHHHHHhh
Confidence 579999999999999999999999999999998732211 11111 111222222221 0111000
Q ss_pred CCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEc
Q 014198 131 DNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIG 210 (429)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~ 210 (429)
.... ..+.+... ... . . .+ ...+ .....+++..+.+.|.+.+ .+.|++++++
T Consensus 76 -~~~~---~~~~~~~~-g~~-~-------~-----~~-------~~~~--~~~~~~~r~~l~~~L~~~~-~~~gv~i~~~ 127 (379)
T 3alj_A 76 -SHTP---PTYETWMH-NKS-V-------S-----KE-------TFNG--LPWRIMTRSHLHDALVNRA-RALGVDISVN 127 (379)
T ss_dssp -CBCC---SCEEEEET-TEE-E-------E-----EE-------CGGG--CCEEEEEHHHHHHHHHHHH-HHTTCEEESS
T ss_pred -CCCc---cceEEEeC-Cce-e-------e-----ec-------cCCC--CceEEECHHHHHHHHHHHH-HhcCCEEEeC
Confidence 0000 00011000 000 0 0 00 0001 1257889999999999999 7789999999
Q ss_pred e-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHHhhh
Q 014198 211 K-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFELLA 254 (429)
Q Consensus 211 ~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~~~~ 254 (429)
+ |++++. ++ .|++.+|.+++||.||.|+|.++.....++
T Consensus 128 ~~v~~i~~--~~---~v~~~~g~~~~ad~vV~AdG~~s~vr~~l~ 167 (379)
T 3alj_A 128 SEAVAADP--VG---RLTLQTGEVLEADLIVGADGVGSKVRDSIG 167 (379)
T ss_dssp CCEEEEET--TT---EEEETTSCEEECSEEEECCCTTCHHHHHHC
T ss_pred CEEEEEEe--CC---EEEECCCCEEEcCEEEECCCccHHHHHHhc
Confidence 9 999986 33 467778888999999999999998665544
No 41
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.55 E-value=7.5e-13 Score=130.09 Aligned_cols=202 Identities=13% Similarity=0.034 Sum_probs=113.4
Q ss_pred ccceeEehHHHHHHHHHHHHhh-cCcEEEEceEEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHH-hhhcccc
Q 014198 181 QTTAQVHPQLFTKTLLNKAVND-YGLEVVIGKVERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFE-LLASMFR 258 (429)
Q Consensus 181 ~~~~~~~~~~l~~~l~~~~~~~-~Gv~v~~~~v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~-~~~~~~~ 258 (429)
.....+++..+.+.|.+.+ ++ .|+++++++|+++..++++.+..|++.+|.+++||.||.|+|.++..+. .++....
T Consensus 167 ~~~~~~~r~~l~~~L~~~a-~~~~Gv~i~~~~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~~~~lg~~~~ 245 (526)
T 2pyx_A 167 NYGYHLNAAKFSQLLTEHC-TQKLGVTHIRDHVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLLGEHLQVPFL 245 (526)
T ss_dssp CCEEEECHHHHHHHHHHHH-HHTSCCEEEECCEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCCCCCCTCCCEE
T ss_pred CeeEEEcHHHHHHHHHHHH-HhcCCCEEEEeEEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCCcc
Confidence 4567899999999999999 77 8999999989999876456666788877778999999999999987643 3443221
Q ss_pred c----ccc-eeeEEEecCCC-CCCCCCceeEeeeccCCCCCCCCCCCceEecCCCcEEEeccCCCCCCCCCCCCCCCCHH
Q 014198 259 V----SGL-KAHSIILEPKE-ADAITPHALFLSYYPAQGEGGKPMDPEVYPRPTGEVYLCGMSSEQEVPDDPETVSGDPA 332 (429)
Q Consensus 259 ~----~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~g~~~~~~~~~~~~~~~~~~~ 332 (429)
. .+. ....+...... ..+..+..... .. ..+ ...++|.+++... +...... ...+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~g------~~~~~pl~~~~~~--~~v~~~~-------~~~~~~ 308 (526)
T 2pyx_A 246 SQKSVLFNDRALAIQVPYSDANSPIASCTHST-AQ-PNG------WIWDIGLPTRKGV--GYVYSSS-------HTNDID 308 (526)
T ss_dssp ECHHHHCCCEEEEEEEECSSTTCCCCSSEEEE-EE-TTE------EEEEEECSSEEEE--EEEECTT-------TCCHHH
T ss_pred cccccccCccEEEEEeeccCCCCCCCCceeEE-ec-CCC------eEEEeeCCCceEE--EEEecCC-------CCChHH
Confidence 1 111 12222222110 00122222111 10 111 1234565553221 1111000 001122
Q ss_pred HHHHHHHHHHHhcccc--Ccccccceeeeeeccc-CCCCCceeccCCCCCcEEEEecCCCccchhhHHHHHHHHHHH
Q 014198 333 SIQVLKRVARTVSSHL--GEEAQVKAEQACFLPC-TDDGVPVIGELPGIKGCYVGTGHNCWGILNGPATGAALAELV 406 (429)
Q Consensus 333 ~~~~l~~~~~~~~p~l--~~~~~~~~~~~g~r~~-t~d~~p~ig~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i 406 (429)
..+.+.+.+...-+.+ .+ ......+.+.++. ..++..++|... .....+.|+|+.+|...|..|++.|
T Consensus 309 ~~~~l~~~l~~~~~~l~~~~-~~~~~~~~~~~~~~~~grv~LiGDAA-----h~~~P~~GqGi~~ai~da~~La~~L 379 (526)
T 2pyx_A 309 AQKTLFNYLGVDGAAADKLE-PRQLAINPGYRAKCWQNNCIAIGMAA-----GFIEPLEASALALIEWTASTLAQQL 379 (526)
T ss_dssp HHHHHHHHHTCCHHHHHHCC-CEEEECCCEEESCSEETTEEECGGGT-----EECCCTTCHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcCcccccCC-ceEEecccCccccccCCCEEEEEhhh-----cccCccccccHHHHHHHHHHHHHHh
Confidence 3334444442211222 11 1223334444332 346667788553 6667889999999999999999988
No 42
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.55 E-value=1.1e-13 Score=132.53 Aligned_cols=207 Identities=14% Similarity=0.116 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHHhhhc-cc---------
Q 014198 189 QLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFELLAS-MF--------- 257 (429)
Q Consensus 189 ~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~~~~~-~~--------- 257 (429)
..+.+.|.+.+ ++.|++|++++ |++|..+ ++++.+|.+ ++++++||.||+|+|++....+..+. ..
T Consensus 196 ~~l~~~l~~~~-~~~G~~i~~~~~V~~i~~~-~~~~~gv~~-~g~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~ 272 (425)
T 3ka7_A 196 KGIIDALETVI-SANGGKIHTGQEVSKILIE-NGKAAGIIA-DDRIHDADLVISNLGHAATAVLCSEALSKEADAAYFKM 272 (425)
T ss_dssp HHHHHHHHHHH-HHTTCEEECSCCEEEEEEE-TTEEEEEEE-TTEEEECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHH
T ss_pred HHHHHHHHHHH-HHcCCEEEECCceeEEEEE-CCEEEEEEE-CCEEEECCEEEECCCHHHHHHhcCCcccccCCHHHHHH
Confidence 56888899999 88899999999 9999987 777777877 47889999999999988765432111 00
Q ss_pred --cccccee--eEEEecCCCCCCCCCceeEeeeccCCCCCCCCCCCceEe--cCCCcEEEeccCCCCCCCCCCCCCCCCH
Q 014198 258 --RVSGLKA--HSIILEPKEADAITPHALFLSYYPAQGEGGKPMDPEVYP--RPTGEVYLCGMSSEQEVPDDPETVSGDP 331 (429)
Q Consensus 258 --~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~i~g~~~~~~~~~~~~~~~~~~ 331 (429)
.+..... ..+.++.+ ....+.++.......-.. ........| .+.|..++.-.... . ......++
T Consensus 273 ~~~~~~~~~~~v~l~~~~~---~~~~~~~~~~~~~~~~~~-~~~~s~~~p~~ap~G~~~l~~~~~~-~----~~~~~~~~ 343 (425)
T 3ka7_A 273 VGTLQPSAGIKICLAADEP---LVGHTGVLLTPYTRRING-VNEVTQADPELAPPGKHLTMCHQYV-A----PENVKNLE 343 (425)
T ss_dssp HHHCCCBEEEEEEEEESSC---SSCSSSEEECCSSSSEEE-EECGGGTCGGGSCTTCEEEEEEEEE-C----GGGGGGHH
T ss_pred hhCcCCCceEEEEeecCCC---ccCcCEEEECCChhhcce-EEeccCCCCCcCCCCCeEEEEEecc-c----cccccchH
Confidence 0111112 12223322 122222222211000000 000000011 13343322111000 0 01111224
Q ss_pred HHHHHHHHHHHHhccccCcccccceeeeeeccc-CCCCCceeccCCCCCcEEEEecCC----CccchhhHHHHHHHHHHH
Q 014198 332 ASIQVLKRVARTVSSHLGEEAQVKAEQACFLPC-TDDGVPVIGELPGIKGCYVGTGHN----CWGILNGPATGAALAELV 406 (429)
Q Consensus 332 ~~~~~l~~~~~~~~p~l~~~~~~~~~~~g~r~~-t~d~~p~ig~~~~~~~~~~~~G~~----~~G~~~a~~~a~~la~~i 406 (429)
+.++.+++.+.+++|...........|..-.|. ++............+|||+|+.+. |.|+--+...|...++.|
T Consensus 344 ~~~~~~~~~l~~~~p~~~~~~~~v~~~~~~~P~~~~~~~~~~~~~~p~~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i 423 (425)
T 3ka7_A 344 SEIEMGLEDLKEIFPGKRYEVLLIQSYHDEWPVNRAASGTDPGNETPFSGLYVVGDGAKGKGGIEVEGVALGVMSVMEKV 423 (425)
T ss_dssp HHHHHHHHHHHHHSTTCCEEEEEEEEEBTTBCSBSSCTTCCCCSBCSSBTEEECSTTSCCTTCCHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHhCCCCceEEEEEEEECCCccccccccCCCCCCCCCcCCeEEeCCccCCCCCCccHHHHHHHHHHHHHh
Confidence 567899999999998743211223444433342 222222233333346999996653 567777777788887776
Q ss_pred h
Q 014198 407 M 407 (429)
Q Consensus 407 ~ 407 (429)
+
T Consensus 424 ~ 424 (425)
T 3ka7_A 424 L 424 (425)
T ss_dssp -
T ss_pred h
Confidence 3
No 43
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.55 E-value=3.3e-13 Score=135.43 Aligned_cols=171 Identities=18% Similarity=0.158 Sum_probs=99.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-CCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHH------H
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAK-KGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSL------A 124 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~-~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~------~ 124 (429)
..+||+|||||++|+++|+.|++ .|++|+||||...... .++.. .+...++++++++ .
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~-~g~a~--------------~l~~~t~e~l~~lGl~~~~~ 95 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPME-LGQAD--------------GIACRTMEMFEAFEFADSIL 95 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCS-SCSCC--------------EECHHHHHHHHHTTCHHHHH
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCC-CCcee--------------eeCHHHHHHHHHcCcHHHHH
Confidence 46899999999999999999999 9999999999862211 11111 1222233444332 2
Q ss_pred HHhCCCCCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccC-ccccceeEehHHHHHHHHHHHHhhc
Q 014198 125 EELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIG-STQTTAQVHPQLFTKTLLNKAVNDY 203 (429)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~l~~~l~~~~~~~~ 203 (429)
.. + ........+............... ... ...+ .......+++..+.+.|.+.+ ++.
T Consensus 96 ~~-~------~~~~~~~~~~~~~~~~g~~~~~~~-----~~~--------~~~~~~~~~~~~i~q~~l~~~L~~~a-~~~ 154 (639)
T 2dkh_A 96 KE-A------CWINDVTFWKPDPGQPGRIARHGR-----VQD--------TEDGLSEFPHVILNQARVHDHYLERM-RNS 154 (639)
T ss_dssp HH-S------EEECEEEEEEECTTSTTCEEEEEE-----EES--------SCTTSCSSCEEECCHHHHHHHHHHHH-HHS
T ss_pred Hh-c------ccccceEEECCCCCCCcceEeecc-----cCc--------ccCCCCCCceEeeCHHHHHHHHHHHH-HhC
Confidence 11 1 111111111100000000000000 000 0001 112345678889999999999 777
Q ss_pred Cc--EEEEce-EEEEEEccC--CcEEEEEEe------CC--eEEEcCEEEEcCCCCchHHHhhhcccc
Q 014198 204 GL--EVVIGK-VERVGVGEG--GRVESVMIE------GG--RVVESDAVVLALGPWSGKFELLASMFR 258 (429)
Q Consensus 204 Gv--~v~~~~-v~~i~~~~~--g~v~~v~~~------~g--~~i~ad~vV~a~G~~s~~~~~~~~~~~ 258 (429)
|+ +|++++ |++++.+++ +..+.|++. +| .+++||.||.|+|++|.....++...+
T Consensus 155 g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~ 222 (639)
T 2dkh_A 155 PSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIGRQLV 222 (639)
T ss_dssp TTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTTCCCE
T ss_pred CCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhCCCCC
Confidence 77 999999 999998732 222345544 35 579999999999999986556655443
No 44
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.53 E-value=2.8e-13 Score=134.35 Aligned_cols=175 Identities=14% Similarity=0.127 Sum_probs=102.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCC--CCcchh------------------
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCD--GGPLSS------------------ 111 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~--~~~~~~------------------ 111 (429)
..+||||||||++|+++|+.|+++|.+|+||||....+++|..++|.+...+.. ...+..
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~~~v 96 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDAI 96 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 358999999999999999999999999999999987667776666555543321 111111
Q ss_pred --hhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehH
Q 014198 112 --LARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQ 189 (429)
Q Consensus 112 --l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 189 (429)
+...+.+....+ ...+.. +.....+.+..... .+....+...... .... ........
T Consensus 97 ~~l~~~s~~~i~~L-~~~Gv~--f~~~~~g~~~~~~~-------------gg~s~~~g~~~~~-~R~~----~~~d~tG~ 155 (621)
T 2h88_A 97 HYMTEQAPAAVIEL-ENYGMP--FSRTEEGKIYQRAF-------------GGQSLQFGKGGQA-HRCC----CVADRTGH 155 (621)
T ss_dssp HHHHHHHHHHHHHH-HHTTCC--CCBCTTSSBCEECC-------------TTCBSTTTTSCBC-CCEE----CSTTCHHH
T ss_pred HHHHHHHHHHHHHH-HHcCCC--cccCCCCceecccc-------------CcccccccCCCcc-eeEE----EecCCCHH
Confidence 111111112212 122221 11100111100000 0000000000000 0000 00111356
Q ss_pred HHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEe---CCe--EEEcCEEEEcCCCCchH
Q 014198 190 LFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIE---GGR--VVESDAVVLALGPWSGK 249 (429)
Q Consensus 190 ~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~---~g~--~i~ad~vV~a~G~~s~~ 249 (429)
.+++.|.+.+ .+.|++|++++ |++|..+ ++++.+|.+. +|+ .+.|+.||+|||+++..
T Consensus 156 ~l~~~L~~~~-~~~gv~i~~~~~v~~Li~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 156 SLLHTLYGRS-LRYDTSYFVEYFALDLLME-NGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp HHHHHHHHHH-TTSCCEEEETEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHH-HhCCCEEEEceEEEEEEEE-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 8999999999 78899999999 9999987 7888888764 453 68999999999999864
No 45
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.53 E-value=2.5e-13 Score=135.66 Aligned_cols=179 Identities=16% Similarity=0.181 Sum_probs=104.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCC-----CCcch-----------------
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCD-----GGPLS----------------- 110 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~-----~~~~~----------------- 110 (429)
++||||||||++|+++|+.|+++|++|+||||....+++|..++|.+...... ...+.
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~g~~ds~~~~~~dt~~~g~~~~d~~ 84 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMSDGDNEDLHFMDTVKGSDWGCDQK 84 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSGGGGCCSCEECCCCCSGGGTTCCHHHHHHHHHHHTTTCSCHH
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCCcccccCCCeEeccCCcccCCCCCHHHHHHHHHHhcCCCCCHH
Confidence 57999999999999999999999999999999987666665554444432222 11111
Q ss_pred ---hhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCC----CCccC-cc-c
Q 014198 111 ---SLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARS----PTTIG-ST-Q 181 (429)
Q Consensus 111 ---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g-~~-~ 181 (429)
.+...+.+.+..+ ...+.. +.....|...+.. .+...++++..... ....+ .. +
T Consensus 85 ~v~~~~~~s~~~i~~L-~~~Gv~--f~~~~~G~~~~~~--------------~g~~~~~l~~~e~~~~~~~~~~gg~~~~ 147 (660)
T 2bs2_A 85 VARMFVNTAPKAIREL-AAWGVP--WTRIHKGDRMAII--------------NAQKTTITEEDFRHGLIHSRDFGGTKKW 147 (660)
T ss_dssp HHHHHHHHHHHHHHHH-HHTTCC--CCBCCSEEEECCC--------------SSCCCEEEECGGGTTSBCCBCCTTCSSC
T ss_pred HHHHHHHHHHHHHHHH-HHcCCC--ceecCCCcccccc--------------cccccccccchhhhhhhccccccccccc
Confidence 1111122222222 223331 1111111111000 01111111111110 00111 10 1
Q ss_pred cc---eeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEe---CCe--EEEcCEEEEcCCCCchHH
Q 014198 182 TT---AQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIE---GGR--VVESDAVVLALGPWSGKF 250 (429)
Q Consensus 182 ~~---~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~---~g~--~i~ad~vV~a~G~~s~~~ 250 (429)
.. .......++..|.+.+ .+.|++|++++ |++|..+ ++++.+|.+. +|. .+.||.||+|||+++...
T Consensus 148 R~~~~~d~tG~~l~~~L~~~a-~~~gv~i~~~~~v~~L~~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~y 223 (660)
T 2bs2_A 148 RTCYTADATGHTMLFAVANEC-LKLGVSIQDRKEAIALIHQ-DGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIY 223 (660)
T ss_dssp CEECSTTCHHHHHHHHHHHHH-HHHTCEEECSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEECSEEEECCCCCGGGS
T ss_pred eeEeeCCCCHHHHHHHHHHHH-HhCCCEEEECcEEEEEEec-CCEEEEEEEEECCCCcEEEEEcCEEEEccCcchhhc
Confidence 00 1123568999999999 77899999999 9999886 7888887663 454 589999999999998653
No 46
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.52 E-value=1.7e-13 Score=133.60 Aligned_cols=68 Identities=18% Similarity=0.277 Sum_probs=58.7
Q ss_pred ccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHH
Q 014198 181 QTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKF 250 (429)
Q Consensus 181 ~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~ 250 (429)
+..+......+.+.|.+.+ ++.|+++++++ |+++..+ ++++++|.+.++.++.||.||+|+|.++...
T Consensus 212 p~~G~~~~~~l~~~L~~~l-~~~Gv~I~~~t~V~~I~~~-~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~~~ 280 (549)
T 3nlc_A 212 PHIGTFKLVTMIEKMRATI-IELGGEIRFSTRVDDLHME-DGQITGVTLSNGEEIKSRHVVLAVGHSARDT 280 (549)
T ss_dssp CCCCHHHHHHHHHHHHHHH-HHTTCEEESSCCEEEEEES-SSBEEEEEETTSCEEECSCEEECCCTTCHHH
T ss_pred cccccchHHHHHHHHHHHH-HhcCCEEEeCCEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCChhhH
Confidence 3445566788999999999 78899999999 9999987 7778889998888999999999999999744
No 47
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.52 E-value=5.2e-13 Score=132.30 Aligned_cols=176 Identities=14% Similarity=0.116 Sum_probs=99.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCC--CCcch-------------------
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCD--GGPLS------------------- 110 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~--~~~~~------------------- 110 (429)
.++||||||||++|+++|+.|+++|.+|+||||....++.|..++|.+...... .....
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v 85 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAI 85 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 358999999999999999999999999999999986655655544444332221 11110
Q ss_pred -hhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehH
Q 014198 111 -SLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQ 189 (429)
Q Consensus 111 -~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 189 (429)
.+...+.+....+ .+.+.. +.....+.+..... ......+-. ... ... .. .......
T Consensus 86 ~~~~~~~~~~i~~l-~~~Gv~--f~~~~~g~~~~~~~-------------~g~~~~~~~-~~~-~r~--~~--~~d~~g~ 143 (588)
T 2wdq_A 86 EYMCKTGPEAILEL-EHMGLP--FSRLDDGRIYQRPF-------------GGQSKNFGG-EQA-ART--AA--AADRTGH 143 (588)
T ss_dssp HHHHHHHHHHHHHH-HHTTCC--CCBCTTSSBCEECC-------------TTCBSTTTC-SBC-CCE--EC--STTCHHH
T ss_pred HHHHHhHHHHHHHH-HHcCCC--cccCCCCcEeeeec-------------CCccccccc-cCc-ceE--EE--cCCCCHH
Confidence 0111111111111 122221 11000010000000 000000000 000 000 00 0112357
Q ss_pred HHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEe---CCe--EEEcCEEEEcCCCCchHH
Q 014198 190 LFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIE---GGR--VVESDAVVLALGPWSGKF 250 (429)
Q Consensus 190 ~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~---~g~--~i~ad~vV~a~G~~s~~~ 250 (429)
.+++.|.+.+ ++.|++|++++ |++|..++++++.+|.+. +|. .+.|+.||+|||+++...
T Consensus 144 ~l~~~L~~~~-~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~y 209 (588)
T 2wdq_A 144 ALLHTLYQQN-LKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIY 209 (588)
T ss_dssp HHHHHHHHHH-HHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGGS
T ss_pred HHHHHHHHHH-HhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCcccc
Confidence 8899999999 77899999999 999997536778787753 453 689999999999988653
No 48
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.52 E-value=9.5e-14 Score=133.62 Aligned_cols=58 Identities=29% Similarity=0.528 Sum_probs=51.9
Q ss_pred hHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCc
Q 014198 188 PQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWS 247 (429)
Q Consensus 188 ~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s 247 (429)
...+++.|.+.+ ++.|+++++++ |+++..+ ++++++|++.+|.+++||.||+|+|+++
T Consensus 133 ~~~l~~~L~~~~-~~~GV~i~~~~~V~~i~~~-~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 133 AQSVVDALLTRL-KDLGVKIRTNTPVETIEYE-NGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHH-HHTTCEEECSCCEEEEEEE-TTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHH-HHCCCEEEeCcEEEEEEec-CCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 478889999999 78899999999 9999987 7777788888777799999999999999
No 49
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.50 E-value=2.5e-13 Score=134.46 Aligned_cols=163 Identities=20% Similarity=0.237 Sum_probs=102.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCC-------CCcchhhh-----------
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCD-------GGPLSSLA----------- 113 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~-------~~~~~~l~----------- 113 (429)
..+||+|||+|++|+++|+.|+++|++|+|+||.+..++.+..++|.++..... ......+.
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIN 204 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 357999999999999999999999999999999996677777777766542211 00101110
Q ss_pred ---------HHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccce
Q 014198 114 ---------RASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTA 184 (429)
Q Consensus 114 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 184 (429)
..+.+.++.+ ...+... .. +. ....... .. ...+..+
T Consensus 205 ~~~~v~~~~~~~~~~i~~l-~~~Gv~~----~~---~~-----------------------~~gg~~~-~r--~~~~~~~ 250 (572)
T 1d4d_A 205 DPELVKVLANNSSDSIDWL-TSMGADM----TD---VG-----------------------RMGGASV-NR--SHRPTGG 250 (572)
T ss_dssp CHHHHHHHHHTHHHHHHHH-HHHTCCC----CE---EE-----------------------CCTTCSS-CC--EEESTTT
T ss_pred CHHHHHHHHHccHHHHHHH-HhcCCcc----cc---cc-----------------------ccCCCcC-Ce--eEecCCC
Confidence 0011111111 1112210 00 00 0000000 00 0012223
Q ss_pred eEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccC-CcEEEEEEe--CCe--EEEcCEEEEcCCCCchHH
Q 014198 185 QVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEG-GRVESVMIE--GGR--VVESDAVVLALGPWSGKF 250 (429)
Q Consensus 185 ~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~-g~v~~v~~~--~g~--~i~ad~vV~a~G~~s~~~ 250 (429)
......+.+.|.+.+ ++.|++|++++ |++|..+ + +++.+|.+. +|+ ++.||.||+|+|+++.+.
T Consensus 251 ~~~g~~l~~~L~~~~-~~~gv~i~~~t~v~~l~~~-~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~~ 320 (572)
T 1d4d_A 251 AGVGAHVAQVLWDNA-VKRGTDIRLNSRVVRILED-ASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKNN 320 (572)
T ss_dssp CCHHHHHHHHHHHHH-HHTTCEEESSEEEEEEEEC---CCEEEEEEEETTTEEEEEECSEEEECCCCCTTCH
T ss_pred CCCHHHHHHHHHHHH-HHcCCeEEecCEEEEEEEC-CCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccCH
Confidence 345678999999999 88899999999 9999887 5 888888776 454 689999999999998653
No 50
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.50 E-value=5.8e-13 Score=120.09 Aligned_cols=138 Identities=24% Similarity=0.314 Sum_probs=90.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC-CCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKK-GAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPD 131 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~-G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 131 (429)
.+||+|||||++|+++|+.|+++ |.+|+||||....++.+..+++.+........ ..++..+++..
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~------------~~~~l~~~G~~- 105 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKP------------AHLFLDEIGVA- 105 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETT------------THHHHHHHTCC-
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcH------------HHHHHHHcCCC-
Confidence 57999999999999999999997 99999999998433333333333221110000 11222334432
Q ss_pred CcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce
Q 014198 132 NYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK 211 (429)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~ 211 (429)
+...+.+. ...+...+...|.+.+.++.|+++++++
T Consensus 106 ---~~~~~~~~-----------------------------------------~~~~~~~~~~~l~~~~~~~~gv~i~~~~ 141 (284)
T 1rp0_A 106 ---YDEQDTYV-----------------------------------------VVKHAALFTSTIMSKLLARPNVKLFNAV 141 (284)
T ss_dssp ---CEECSSEE-----------------------------------------EESCHHHHHHHHHHHHHTSTTEEEEETE
T ss_pred ---cccCCCEE-----------------------------------------EecCHHHHHHHHHHHHHhcCCCEEEcCc
Confidence 11111000 0114466777888888334799999999
Q ss_pred -EEEEEEccCCcEEEEEEe---------CC-----eEEEcCEEEEcCCCCch
Q 014198 212 -VERVGVGEGGRVESVMIE---------GG-----RVVESDAVVLALGPWSG 248 (429)
Q Consensus 212 -v~~i~~~~~g~v~~v~~~---------~g-----~~i~ad~vV~a~G~~s~ 248 (429)
|+++..+ ++++.+|.+. ++ .+++||.||+|+|..+.
T Consensus 142 ~V~~i~~~-~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~ 192 (284)
T 1rp0_A 142 AAEDLIVK-GNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGP 192 (284)
T ss_dssp EEEEEEEE-TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSST
T ss_pred EEEEEEec-CCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchH
Confidence 9999987 6777677663 22 67999999999997654
No 51
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.50 E-value=6.6e-13 Score=125.97 Aligned_cols=163 Identities=21% Similarity=0.215 Sum_probs=94.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPD 131 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 131 (429)
..+||+|||||++|+++|+.|+++|++|+|+||....... ..++.+... ... .....+.+.+++++........
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~--~~g~~~~~~--~~~--~~~~l~~~gl~~~~~~~~~~~~ 98 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREAR--IFGGTLDLH--KGS--GQEAMKKAGLLQTYYDLALPMG 98 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCC--CCSCCEECC--TTT--HHHHHHHTTCHHHHHHHCBCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCcccc--ccCCeeeeC--Ccc--HHHHHHhcChHHHHHHhhcccc
Confidence 4579999999999999999999999999999998622111 112222110 000 0111122233444433221100
Q ss_pred CcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce
Q 014198 132 NYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK 211 (429)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~ 211 (429)
...+...|...... ..+. .+ ......++...+.+.|.+.+ . ++++++++
T Consensus 99 ~~~~~~~g~~~~~~---------------------~~~~------~~-~~~~~~i~r~~l~~~L~~~~-~--~~~i~~~~ 147 (398)
T 2xdo_A 99 VNIADEKGNILSTK---------------------NVKP------EN-RFDNPEINRNDLRAILLNSL-E--NDTVIWDR 147 (398)
T ss_dssp EEEECSSSEEEEEC---------------------CCGG------GT-TSSCCEECHHHHHHHHHHTS-C--TTSEEESC
T ss_pred eEEECCCCCchhhc---------------------cccc------cC-CCCCceECHHHHHHHHHhhc-C--CCEEEECC
Confidence 00000001100000 0000 00 01123578888888888877 4 37899999
Q ss_pred -EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHHhh
Q 014198 212 -VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFELL 253 (429)
Q Consensus 212 -v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~~~ 253 (429)
|++++.+ ++.+ .|++.+|.+++||.||.|+|.+|.....+
T Consensus 148 ~v~~i~~~-~~~v-~v~~~~g~~~~ad~vV~AdG~~S~vR~~l 188 (398)
T 2xdo_A 148 KLVMLEPG-KKKW-TLTFENKPSETADLVILANGGMSKVRKFV 188 (398)
T ss_dssp CEEEEEEC-SSSE-EEEETTSCCEEESEEEECSCTTCSCCTTT
T ss_pred EEEEEEEC-CCEE-EEEECCCcEEecCEEEECCCcchhHHhhc
Confidence 9999987 4444 47777888899999999999998755544
No 52
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.50 E-value=4.5e-13 Score=131.15 Aligned_cols=58 Identities=24% Similarity=0.339 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCch
Q 014198 189 QLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSG 248 (429)
Q Consensus 189 ~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~ 248 (429)
..+.++|.+.+ ++.|++|++++ |++|..+ ++++.+|++.+|+++.||.||.+++++..
T Consensus 221 ~~l~~aL~~~~-~~~Gg~I~~~~~V~~I~~~-~~~~~gV~~~~g~~~~ad~VV~~a~~~~~ 279 (501)
T 4dgk_A 221 GALVQGMIKLF-QDLGGEVVLNARVSHMETT-GNKIEAVHLEDGRRFLTQAVASNADVVHT 279 (501)
T ss_dssp HHHHHHHHHHH-HHTTCEEECSCCEEEEEEE-TTEEEEEEETTSCEEECSCEEECCC----
T ss_pred cchHHHHHHHH-HHhCCceeeecceeEEEee-CCeEEEEEecCCcEEEcCEEEECCCHHHH
Confidence 57889999999 88999999999 9999998 88899999999999999999999987654
No 53
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.49 E-value=1.4e-12 Score=129.54 Aligned_cols=163 Identities=20% Similarity=0.199 Sum_probs=98.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC--CcEEEEcCCCCccccccccCCeeeeccCCCCcch--------------------
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKG--AAVTLIEKSSVACAASGKAGGFLALDWCDGGPLS-------------------- 110 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G--~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~-------------------- 110 (429)
.+||||||||++|+++|+.|+++| .+|+||||.....+.|..++|-+...+.....+.
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~ 84 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVD 84 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHHH
Confidence 579999999999999999999999 9999999998555555444433333222211111
Q ss_pred hhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCcc-Ccc-c---ccee
Q 014198 111 SLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTI-GST-Q---TTAQ 185 (429)
Q Consensus 111 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~-~---~~~~ 185 (429)
.+...+.+.+..+ ...+.. +.....+.+ ..... +.. + ....
T Consensus 85 ~~~~~~~~~i~~L-~~~Gv~--f~~~~~g~~-------------------------------~~~~~gg~~~~r~~~~~d 130 (602)
T 1kf6_A 85 YFVHHCPTEMTQL-ELWGCP--WSRRPDGSV-------------------------------NVRRFGGMKIERTWFAAD 130 (602)
T ss_dssp HHHHHHHHHHHHH-HHTTCC--CCBCTTSSB-------------------------------CCBCCTTCSSCCEECSTT
T ss_pred HHHHHHHHHHHHH-HHcCCC--cccCCCCcc-------------------------------cccccCCccCCeEEEcCC
Confidence 1111111122211 112221 000000000 00000 000 0 0001
Q ss_pred EehHHHHHHHHHHHHhhcC-cEEEEce-EEEEEEccCCcEEEEEE---eCCe--EEEcCEEEEcCCCCchHHH
Q 014198 186 VHPQLFTKTLLNKAVNDYG-LEVVIGK-VERVGVGEGGRVESVMI---EGGR--VVESDAVVLALGPWSGKFE 251 (429)
Q Consensus 186 ~~~~~l~~~l~~~~~~~~G-v~v~~~~-v~~i~~~~~g~v~~v~~---~~g~--~i~ad~vV~a~G~~s~~~~ 251 (429)
.....+++.|.+.+ .+.| +++++++ |+++..+ ++++.+|.+ .+|. .+.|+.||+|||+++....
T Consensus 131 ~tg~~l~~~L~~~~-~~~gnv~i~~~~~v~~l~~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~ 201 (602)
T 1kf6_A 131 KTGFHMLHTLFQTS-LQFPQIQRFDEHFVLDILVD-DGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYR 201 (602)
T ss_dssp CHHHHHHHHHHHHH-TTCTTEEEEETEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSS
T ss_pred CCHHHHHHHHHHHH-HhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCccccc
Confidence 12468889999999 7778 9999999 9999987 777777754 3565 6899999999999987643
No 54
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.49 E-value=2.2e-13 Score=129.15 Aligned_cols=150 Identities=17% Similarity=0.227 Sum_probs=91.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCcccccccc-CCeeeec--cCCCCc----chhhhHHH-----HH
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKA-GGFLALD--WCDGGP----LSSLARAS-----FN 118 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~-~g~~~~~--~~~~~~----~~~l~~~~-----~~ 118 (429)
...+||+|||||++|+++|+.|+++|++|+|+|+.+..++....+ +|.++.. ...... ...+.... ..
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQ 104 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHH
Confidence 346899999999999999999999999999999998433222111 1111110 000000 00111111 11
Q ss_pred HHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHH
Q 014198 119 LHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNK 198 (429)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~ 198 (429)
....+....+.. +.....+.+. ....+..+.+.|.+.
T Consensus 105 ~~~~~~~~~Gi~--~~~~~~g~~~-----------------------------------------~~~~~~~l~~~L~~~ 141 (417)
T 3v76_A 105 DFVALVERHGIG--WHEKTLGQLF-----------------------------------------CDHSAKDIIRMLMAE 141 (417)
T ss_dssp HHHHHHHHTTCC--EEECSTTEEE-----------------------------------------ESSCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCC--cEEeeCCEEe-----------------------------------------eCCCHHHHHHHHHHH
Confidence 222233333331 1000000000 123456888899999
Q ss_pred HHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCc
Q 014198 199 AVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWS 247 (429)
Q Consensus 199 ~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s 247 (429)
+ ++.|+++++++ |+++..+ ++. +.|.+.++ +++||.||+|+|+++
T Consensus 142 l-~~~Gv~i~~~~~V~~i~~~-~~~-~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 142 M-KEAGVQLRLETSIGEVERT-ASG-FRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp H-HHHTCEEECSCCEEEEEEE-TTE-EEEEETTE-EEEESEEEECCCCSS
T ss_pred H-HHCCCEEEECCEEEEEEEe-CCE-EEEEECCc-EEEeeEEEECCCCcc
Confidence 9 78899999999 9999887 444 45777666 899999999999998
No 55
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.49 E-value=3.2e-12 Score=126.05 Aligned_cols=172 Identities=16% Similarity=0.154 Sum_probs=95.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHH--HHHhC-C
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSL--AEELN-G 129 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~-~ 129 (429)
.+||+|||||++|+++|+.|+++|++|+||||...... ..+. . .+...+.++++++ .+++. .
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~-~~~~-~-------------~l~~~~~~~l~~lGl~~~~~~~ 90 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTIT-HPRV-G-------------TIGPRSMELFRRWGVAKQIRTA 90 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCS-SCCC-C-------------EECHHHHHHHHHTTCHHHHHTS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC-CCce-e-------------eeCHHHHHHHHHcCChHHHHhh
Confidence 57999999999999999999999999999999872211 1111 1 1122333444432 11111 1
Q ss_pred CCCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCC--CccCccccceeEehHHHHHHHHHHHHhhcCcEE
Q 014198 130 PDNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSP--TTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEV 207 (429)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v 207 (429)
...+... .+...+. ... +..+..++...... ...........++...+.+.|.+.+ .+. +
T Consensus 91 ~~~~~~~-~~~~~~~-~~~------------g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a-~~~---v 152 (549)
T 2r0c_A 91 GWPGDHP-LDAAWVT-RVG------------GHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAV-GER---L 152 (549)
T ss_dssp SCCTTSB-CCEEEES-SBT------------SCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHH-GGG---E
T ss_pred cCCcccc-cceEEec-cCC------------CceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHH-HHh---c
Confidence 0011000 0001110 000 00000000000000 0000112235667778888999988 665 8
Q ss_pred EEce-EEEEEEccCCcEEEEEEeC---C--eEEEcCEEEEcCCCCchHHHhhhccccc
Q 014198 208 VIGK-VERVGVGEGGRVESVMIEG---G--RVVESDAVVLALGPWSGKFELLASMFRV 259 (429)
Q Consensus 208 ~~~~-v~~i~~~~~g~v~~v~~~~---g--~~i~ad~vV~a~G~~s~~~~~~~~~~~~ 259 (429)
++++ |++++.+ ++.+. +++.+ | .+++||.||.|+|.+|.....++...+-
T Consensus 153 ~~~~~v~~~~~~-~~~v~-v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g 208 (549)
T 2r0c_A 153 RTRSRLDSFEQR-DDHVR-ATITDLRTGATRAVHARYLVACDGASSPTRKALGIDAPP 208 (549)
T ss_dssp ECSEEEEEEEEC-SSCEE-EEEEETTTCCEEEEEEEEEEECCCTTCHHHHHHTCCCCB
T ss_pred ccCcEEEEEEEe-CCEEE-EEEEECCCCCEEEEEeCEEEECCCCCcHHHHHcCCCCCC
Confidence 9999 9999987 44443 55544 5 4799999999999999865566654443
No 56
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.48 E-value=1.7e-12 Score=130.57 Aligned_cols=318 Identities=16% Similarity=0.162 Sum_probs=155.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHH-----CCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHH--HH
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAK-----KGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSL--AE 125 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~-----~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~--~~ 125 (429)
.+||+|||||++|+++|+.|++ .|++|+||||..... ..++. ..+...++++++++ .+
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~-~~gra--------------~~l~~~tle~l~~lGl~~ 72 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKV-YNGQA--------------DGLQCRTLESLKNLGLAD 72 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCC-CSCSC--------------CEECHHHHHHHHTTTCHH
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCC-CCCce--------------eEEChHHHHHHHHCCCHH
Confidence 5799999999999999999999 999999999986211 11111 11223334444432 11
Q ss_pred HhCCCCCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccC-ccccceeEehHHHHHHHHHHHHhhcC
Q 014198 126 ELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIG-STQTTAQVHPQLFTKTLLNKAVNDYG 204 (429)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~l~~~l~~~~~~~~G 204 (429)
++... ...+. .+.+......-.+ .+... +. ....+ .......++...+.+.|.+.+ .+.|
T Consensus 73 ~l~~~-~~~~~---~~~~~~~~~~g~i-~~~~~--------~~-----~~~~~~~~~~~~~l~q~~le~~L~~~~-~~~g 133 (665)
T 1pn0_A 73 KILSE-ANDMS---TIALYNPDENGHI-RRTDR--------IP-----DTLPGISRYHQVVLHQGRIERRILDSI-AEIS 133 (665)
T ss_dssp HHHTT-CBCCC---EEEEEEECTTSCE-EEEEE--------EE-----SSCTTSCSSCCEECCHHHHHHHHHHHH-HHHH
T ss_pred HHHHh-ccccc---eEEEEeCCCCcce-Eeecc--------cC-----cccCCCCCCeeEEeeHHHHHHHHHHHH-HhcC
Confidence 11100 00010 0111100000000 00000 00 00001 112345678888999999999 7666
Q ss_pred ---cEEEEce-EEEEEEcc-------CCcEEEEEEe------------------------------------------CC
Q 014198 205 ---LEVVIGK-VERVGVGE-------GGRVESVMIE------------------------------------------GG 231 (429)
Q Consensus 205 ---v~v~~~~-v~~i~~~~-------~g~v~~v~~~------------------------------------------~g 231 (429)
++|.+++ |++++.++ +..| .+++. +|
T Consensus 134 ~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G 212 (665)
T 1pn0_A 134 DTRIKVERPLIPEKMEIDSSKAEDPEAYPV-TMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAG 212 (665)
T ss_dssp TTSSCEECSEEEEEEEECGGGTTCTTCCCE-EEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTT
T ss_pred CCceEEEeCCEEEEEEecCcccccCCCCCE-EEEEEecccccccccccccccccccccccccccccccccccccccCCCC
Confidence 8999999 99998863 1233 34332 34
Q ss_pred --eEEEcCEEEEcCCCCchHHHhhhcccccccceeeEEEec--C-CCCCCCCCceeEeeeccCCCCCCCCCCCceEecCC
Q 014198 232 --RVVESDAVVLALGPWSGKFELLASMFRVSGLKAHSIILE--P-KEADAITPHALFLSYYPAQGEGGKPMDPEVYPRPT 306 (429)
Q Consensus 232 --~~i~ad~vV~a~G~~s~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (429)
.+++||.||.|+|++|.....++...+-......+..++ . ....... ....... .. .....++|.++
T Consensus 213 ~~~~i~A~~VVGADG~~S~VR~~lg~~~~g~~~~~~~~v~d~~~~~~~p~~~-~~~~~~~-~~------~g~~~~~P~~~ 284 (665)
T 1pn0_A 213 EIETVHCKYVIGCDGGHSWVRRTLGFEMIGEQTDYIWGVLDAVPASNFPDIR-SRCAIHS-AE------SGSIMIIPREN 284 (665)
T ss_dssp CEEEEEEEEEEECCCTTCHHHHHHTCCCEEEEEEEEEEEEEEEEECCCTTTT-SEEEEEC-SS------SCEEEEEECST
T ss_pred ceEEEEeCEEEeccCCCCHHHHhcCCCCCCCCccEEEEEEEEEECCCCCCcc-eEEEEEe-CC------CceEEEEEcCC
Confidence 579999999999999987776665443222222112221 1 1100111 1111111 01 12245678877
Q ss_pred CcEEEeccCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHhccc-cCcccccceeeeee----c---ccC-CCCCceeccCC
Q 014198 307 GEVYLCGMSSEQEVP-DDPETVSGDPASIQVLKRVARTVSSH-LGEEAQVKAEQACF----L---PCT-DDGVPVIGELP 376 (429)
Q Consensus 307 g~~~i~g~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~p~-l~~~~~~~~~~~g~----r---~~t-~d~~p~ig~~~ 376 (429)
+.+.+.-........ ........+.+ .+++.+++.+.. ... .....+|.-+ + .+. .++..++|..
T Consensus 285 ~~~r~~~~~~~~~~~~~~~~~~~~t~e---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~r~a~~~~~~gRV~L~GDA- 359 (665)
T 1pn0_A 285 NLVRFYVQLQARAEKGGRVDRTKFTPE---VVIANAKKIFHPYTFD-VQQLDWFTAYHIGQRVTEKFSKDERVFIAGDA- 359 (665)
T ss_dssp TCEEEEEEECC----------CCCCHH---HHHHHHHHHHTTSCCE-EEEEEEEEEEEEEEEECSCSEETTTEEECGGG-
T ss_pred CEEEEEEEeCCccccccccCcCCCCHH---HHHHHHHHHhCcccCc-eeeEEEEEeeeccceehhhcccCCCEEEEECc-
Confidence 744332211111000 00011223333 344444443321 111 1122333221 1 122 4566777854
Q ss_pred CCCcEEEEecCCCccchhhHHHHHHH----HHHHhcCCCCcccCCCCCCCC
Q 014198 377 GIKGCYVGTGHNCWGILNGPATGAAL----AELVMDGCASIVDLSRFSPAR 423 (429)
Q Consensus 377 ~~~~~~~~~G~~~~G~~~a~~~a~~l----a~~i~~g~~~~~~~~~~~~~R 423 (429)
.+....++|+|+..+.--|..| +..+ .|...+.-++.|.-+|
T Consensus 360 ----AH~~~P~~GqG~N~gi~DA~nLawkLa~vl-~g~a~~~lL~tYe~eR 405 (665)
T 1pn0_A 360 ----CHTHSPKAGQGMNTSMMDTYNLGWKLGLVL-TGRAKRDILKTYEEER 405 (665)
T ss_dssp ----TEECCSTTCCHHHHHHHHHHHHHHHHHHHH-TTCBCGGGGHHHHHHH
T ss_pred ----cccCCCcccCCcchhHHHHHHHHHHHHHHH-cCCCcHHHHHHHHHHH
Confidence 4777888899988887766555 4444 4544333355555444
No 57
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.48 E-value=5.1e-13 Score=127.26 Aligned_cols=158 Identities=23% Similarity=0.251 Sum_probs=93.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCc-EEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHH------HHHHH
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAA-VTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLH------RSLAE 125 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~-V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~------~~~~~ 125 (429)
.+||+|||||++|+++|+.|+++|++ |+|+||....... ..++ . +...+.+++ +.+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~---g~g~-~-----------l~~~~~~~l~~lg~~~~l~~ 68 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPL---GVGI-N-----------IQPAAVEALAELGLGPALAA 68 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCC---SCEE-E-----------ECHHHHHHHHHTTCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccc---eeEE-E-----------EChHHHHHHHHCCChHHHHh
Confidence 57999999999999999999999999 9999998732110 0111 0 111122222 22221
Q ss_pred HhCCCCCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhh-cC
Q 014198 126 ELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVND-YG 204 (429)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~-~G 204 (429)
. +. . ...+.+....... ..... .....++......+++..+.+.|.+.+ .+ .|
T Consensus 69 ~-~~------~-~~~~~~~~~~g~~---------------~~~~~--~~~~~~~~~~~~~i~r~~l~~~L~~~~-~~~~g 122 (410)
T 3c96_A 69 T-AI------P-THELRYIDQSGAT---------------VWSEP--RGVEAGNAYPQYSIHRGELQMILLAAV-RERLG 122 (410)
T ss_dssp H-SE------E-ECEEEEECTTSCE---------------EEEEE--CGGGGTCSSCEEEEEHHHHHHHHHHHH-HHHHC
T ss_pred h-CC------C-cceEEEEcCCCCE---------------Eeecc--CCccccCCCCeeeeeHHHHHHHHHHHH-HhhCC
Confidence 1 11 0 0011111000000 00000 000001112246788899999999998 55 46
Q ss_pred -cEEEEce-EEEEEEccCCcEEEEEEeC---C--eEEEcCEEEEcCCCCchHHHhhh
Q 014198 205 -LEVVIGK-VERVGVGEGGRVESVMIEG---G--RVVESDAVVLALGPWSGKFELLA 254 (429)
Q Consensus 205 -v~v~~~~-v~~i~~~~~g~v~~v~~~~---g--~~i~ad~vV~a~G~~s~~~~~~~ 254 (429)
+++++++ |++++. +++ + .|++.+ | .+++||.||.|+|.+|.....++
T Consensus 123 ~~~v~~~~~v~~i~~-~~~-v-~v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~l~ 176 (410)
T 3c96_A 123 QQAVRTGLGVERIEE-RDG-R-VLIGARDGHGKPQALGADVLVGADGIHSAVRAHLH 176 (410)
T ss_dssp TTSEEESEEEEEEEE-ETT-E-EEEEEEETTSCEEEEEESEEEECCCTTCHHHHHHC
T ss_pred CcEEEECCEEEEEec-CCc-c-EEEEecCCCCCceEEecCEEEECCCccchhHHHhc
Confidence 5899999 999987 355 3 355554 6 57999999999999998766443
No 58
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.48 E-value=1.6e-13 Score=130.73 Aligned_cols=66 Identities=17% Similarity=0.097 Sum_probs=51.7
Q ss_pred eeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHHhhh
Q 014198 184 AQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFELLA 254 (429)
Q Consensus 184 ~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~~~~ 254 (429)
..++...|.+.|.+.+ +.+|++++ |++++..+++.+ .|++.||.+++||.||.|+|.+|.....+.
T Consensus 107 ~~i~R~~L~~~L~~~~----~~~v~~~~~v~~~~~~~~~~v-~v~~~dG~~~~adlvVgADG~~S~vR~~l~ 173 (412)
T 4hb9_A 107 LSISRTELKEILNKGL----ANTIQWNKTFVRYEHIENGGI-KIFFADGSHENVDVLVGADGSNSKVRKQYL 173 (412)
T ss_dssp EEEEHHHHHHHHHTTC----TTTEECSCCEEEEEECTTSCE-EEEETTSCEEEESEEEECCCTTCHHHHHHS
T ss_pred eEeeHHHHHHHHHhhc----cceEEEEEEEEeeeEcCCCeE-EEEECCCCEEEeeEEEECCCCCcchHHHhC
Confidence 4567777777776554 45789999 999998646654 588889999999999999999998776443
No 59
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.47 E-value=1.9e-13 Score=134.16 Aligned_cols=168 Identities=20% Similarity=0.144 Sum_probs=86.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCc--------------------chh
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGP--------------------LSS 111 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~--------------------~~~ 111 (429)
.++||+|||||++|+++|+.|++ |.+|+||||....+++|..++|.+......... +..
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~ds~~~~~~d~l~~g~g~~d~~~v~~ 85 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVEF 85 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-------------CCSHHHHHHHHHHHHHHTTTCCCHHHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCChhhcCCCEEEecCCCCCHHHHHHHHHHhhcccCCHHHHHH
Confidence 36899999999999999999999 999999999997777777777666543211000 011
Q ss_pred hhHHHHHHHHHHHHHhCCCCCcCeee----eeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEe
Q 014198 112 LARASFNLHRSLAEELNGPDNYGYRA----LTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVH 187 (429)
Q Consensus 112 l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 187 (429)
+...+.+.++.+. +.+.. +.... .+.+...... ....... .......
T Consensus 86 ~~~~~~~~i~~l~-~~Gv~--f~~~~~~~~~g~~~~~~~g----------------------g~~~~r~----~~~~d~~ 136 (540)
T 1chu_A 86 VASNARSCVQWLI-DQGVL--FDTHIQPNGEESYHLTREG----------------------GHSHRRI----LHAADAT 136 (540)
T ss_dssp HHHHHHHHHHHHH-HTTCC-------------------------------------------------------------
T ss_pred HHHhHHHHHHHHH-HcCCC--cccCcccCcCCcccccccc----------------------ccccCeE----EEeCCCC
Confidence 1112222222222 22321 11000 0000000000 0000000 0001123
Q ss_pred hHHHHHHHHHHHHhh-cCcEEEEce-EEEEEEccCC------cEEEEEEe---CCe--EEEcCEEEEcCCCCchHH
Q 014198 188 PQLFTKTLLNKAVND-YGLEVVIGK-VERVGVGEGG------RVESVMIE---GGR--VVESDAVVLALGPWSGKF 250 (429)
Q Consensus 188 ~~~l~~~l~~~~~~~-~Gv~v~~~~-v~~i~~~~~g------~v~~v~~~---~g~--~i~ad~vV~a~G~~s~~~ 250 (429)
...+++.|.+.+ ++ .|++|++++ |+++..++++ ++.+|.+. +|+ .+.||.||+|||+++...
T Consensus 137 g~~l~~~L~~~~-~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~ 211 (540)
T 1chu_A 137 GREVETTLVSKA-LNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVY 211 (540)
T ss_dssp -----CCCHHHH-HHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGGS
T ss_pred HHHHHHHHHHHH-HcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCccccc
Confidence 456777888888 66 799999999 9999984245 78888775 454 789999999999998653
No 60
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.46 E-value=8.9e-12 Score=115.30 Aligned_cols=34 Identities=35% Similarity=0.520 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
++||+|||||++|+++|+.|+++|++|+||||..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~ 35 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCC
Confidence 4699999999999999999999999999999997
No 61
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.45 E-value=3.2e-12 Score=124.05 Aligned_cols=206 Identities=15% Similarity=0.172 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHHhhhc-------cccccc
Q 014198 190 LFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFELLAS-------MFRVSG 261 (429)
Q Consensus 190 ~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~~~~~-------~~~~~~ 261 (429)
.+.+.|.+.+ .+ ++|++++ |++|+.+ ++.+ .|++.+|.+++||.||+|+.++....+.... .++..+
T Consensus 236 ~l~~~l~~~l-~~--~~i~~~~~V~~i~~~-~~~~-~v~~~~g~~~~ad~vi~a~p~~~~~~l~~~~~~~~~~~~~~~~~ 310 (470)
T 3i6d_A 236 TLVEEIEKQL-KL--TKVYKGTKVTKLSHS-GSCY-SLELDNGVTLDADSVIVTAPHKAAAGMLSELPAISHLKNMHSTS 310 (470)
T ss_dssp HHHHHHHHTC-CS--EEEECSCCEEEEEEC-SSSE-EEEESSSCEEEESEEEECSCHHHHHHHTTTSTTHHHHHTCEEEE
T ss_pred HHHHHHHHhc-CC--CEEEeCCceEEEEEc-CCeE-EEEECCCCEEECCEEEECCCHHHHHHHcCCchhhHHHhcCCCCc
Confidence 5555555555 32 7999999 9999987 4444 5888888889999999999987643331111 122233
Q ss_pred ceeeEEEecCCCC-CCCCCceeEeeeccCCCCCCCCCCCce-----Ee--cCCCcEEEeccCCCCCCCCCCCCCCCCHHH
Q 014198 262 LKAHSIILEPKEA-DAITPHALFLSYYPAQGEGGKPMDPEV-----YP--RPTGEVYLCGMSSEQEVPDDPETVSGDPAS 333 (429)
Q Consensus 262 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~g~~~i~g~~~~~~~~~~~~~~~~~~~~ 333 (429)
.....+.++.+.- .+......+... .... .....+ ++ .+++..++.+...... ........+++.
T Consensus 311 ~~~v~l~~~~~~~~~~~~~~g~l~~~---~~~~--~~~~~~~~s~~~~~~~p~~~~~l~~~~~~~~--~~~~~~~~~~~~ 383 (470)
T 3i6d_A 311 VANVALGFPEGSVQMEHEGTGFVISR---NSDF--AITACTWTNKKWPHAAPEGKTLLRAYVGKAG--DESIVDLSDNDI 383 (470)
T ss_dssp EEEEEEEESSTTCCCSSCSSEEEECS---TTCC--SEEEEEEHHHHCGGGSCTTCEEEEEEECCSS--CCGGGTSCHHHH
T ss_pred eEEEEEEECchhcCCCCCCeEEEccC---CCCC--CceEEEEEcCcCCCcCCCCCEEEEEEECCCC--CccccCCCHHHH
Confidence 3333334443220 000111111110 0000 000001 11 2344433322111100 111112345667
Q ss_pred HHHHHHHHHHhccccCc-ccccceeeeeecc-cCCCCCceeccC-----CCCCcEEEEec-CCCccchhhHHHHHHHHHH
Q 014198 334 IQVLKRVARTVSSHLGE-EAQVKAEQACFLP-CTDDGVPVIGEL-----PGIKGCYVGTG-HNCWGILNGPATGAALAEL 405 (429)
Q Consensus 334 ~~~l~~~~~~~~p~l~~-~~~~~~~~~g~r~-~t~d~~p~ig~~-----~~~~~~~~~~G-~~~~G~~~a~~~a~~la~~ 405 (429)
.+.+++.+.++++...+ .......|....| ++++....+... ...+|+++++. +.|.|+.-|...|+.+|+.
T Consensus 384 ~~~~~~~l~~~~g~~~~p~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g~gv~~a~~sG~~aA~~ 463 (470)
T 3i6d_A 384 INIVLEDLKKVMNINGEPEMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGVYMTGASFEGVGIPDCIDQGKAAVSD 463 (470)
T ss_dssp HHHHHHHHGGGSCCCSCCSEEEEEEEEEEEEECBTTHHHHHHHHHHHHHHHSTTEEECSTTTSCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCceEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhhCCCEEEEeecCCCCCHHHHHHHHHHHHHH
Confidence 78899999998875433 0123466665444 344322111111 11378999877 7788888899999999988
Q ss_pred Hh
Q 014198 406 VM 407 (429)
Q Consensus 406 i~ 407 (429)
|+
T Consensus 464 i~ 465 (470)
T 3i6d_A 464 AL 465 (470)
T ss_dssp HH
T ss_pred HH
Confidence 84
No 62
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.44 E-value=7e-13 Score=115.81 Aligned_cols=125 Identities=23% Similarity=0.220 Sum_probs=86.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDN 132 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 132 (429)
++||+|||||++|+++|+.|++.|.+|+|||+.....|.+. .+.... .... .+++++ ..
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~------~~~~~~-~~~~-------~~~~~~----~d--- 61 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPF------LPPKPP-FPPG-------SLLERA----YD--- 61 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCS------SCCCSC-CCTT-------CHHHHH----CC---
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCccc------Cccccc-cchh-------hHHhhh----cc---
Confidence 58999999999999999999999999999999841111110 000000 0000 111111 00
Q ss_pred cCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhc-CcEEEEce
Q 014198 133 YGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDY-GLEVVIGK 211 (429)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~-Gv~v~~~~ 211 (429)
..+. ++..+.+.|.+.+ ++. |++++ ++
T Consensus 62 -------------------------------------------------~~g~-~~~~~~~~l~~~~-~~~~gv~i~-~~ 89 (232)
T 2cul_A 62 -------------------------------------------------PKDE-RVWAFHARAKYLL-EGLRPLHLF-QA 89 (232)
T ss_dssp -------------------------------------------------TTCC-CHHHHHHHHHHHH-HTCTTEEEE-EC
T ss_pred -------------------------------------------------CCCC-CHHHHHHHHHHHH-HcCCCcEEE-Ee
Confidence 0000 5567778888888 775 99999 56
Q ss_pred -EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHH
Q 014198 212 -VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFE 251 (429)
Q Consensus 212 -v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~ 251 (429)
|+++..+ +++++.|.+.+|.+++||.||+|+|.++....
T Consensus 90 ~v~~i~~~-~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~ 129 (232)
T 2cul_A 90 TATGLLLE-GNRVVGVRTWEGPPARGEKVVLAVGSFLGARL 129 (232)
T ss_dssp CEEEEEEE-TTEEEEEEETTSCCEECSEEEECCTTCSSCEE
T ss_pred EEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCChhhce
Confidence 9999887 67777788888878999999999999877654
No 63
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.44 E-value=2e-12 Score=124.97 Aligned_cols=157 Identities=21% Similarity=0.243 Sum_probs=98.1
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhH--------------------
Q 014198 55 HVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLAR-------------------- 114 (429)
Q Consensus 55 dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~-------------------- 114 (429)
||+|||||++|+++|+.|+++|++|+||||. ..+++|..++|.+...............
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 7999999999999999999999999999999 6667777666666543332211111111
Q ss_pred HHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHH
Q 014198 115 ASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKT 194 (429)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 194 (429)
.+.+..+.+. +.+...+.. +....... .......+......+.+.
T Consensus 80 ~~~~~i~~l~-~~Gv~~~~~--------------------------------~~~~~g~~--~~r~~~~~d~~g~~l~~~ 124 (472)
T 2e5v_A 80 EAKNVIETFE-SWGFEFEED--------------------------------LRLEGGHT--KRRVLHRTDETGREIFNF 124 (472)
T ss_dssp HHHHHHHHHH-HTTCCCCSS--------------------------------CBCCTTCS--SCCEECSSSCHHHHHHHH
T ss_pred HHHHHHHHHH-HcCCCCCcc--------------------------------cccccCcC--cCcEEEeCCCCHHHHHHH
Confidence 1111121111 222211000 00000000 000000122356788899
Q ss_pred HHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEe-CCeEEEcCEEEEcCCCCchHH
Q 014198 195 LLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIE-GGRVVESDAVVLALGPWSGKF 250 (429)
Q Consensus 195 l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~-~g~~i~ad~vV~a~G~~s~~~ 250 (429)
|.+.+ ++.|+++++++ | ++..+ ++++.++.+. ++.++.||.||+|||+++...
T Consensus 125 L~~~~-~~~gv~i~~~~~v-~l~~~-~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~~ 179 (472)
T 2e5v_A 125 LLKLA-REEGIPIIEDRLV-EIRVK-DGKVTGFVTEKRGLVEDVDKLVLATGGYSYLY 179 (472)
T ss_dssp HHHHH-HHTTCCEECCCEE-EEEEE-TTEEEEEEETTTEEECCCSEEEECCCCCGGGS
T ss_pred HHHHH-HhCCCEEEECcEE-EEEEe-CCEEEEEEEEeCCCeEEeeeEEECCCCCcccC
Confidence 99999 88899999999 9 99877 7777777653 234688999999999988654
No 64
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.42 E-value=1.2e-11 Score=118.20 Aligned_cols=56 Identities=11% Similarity=0.086 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchH
Q 014198 189 QLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGK 249 (429)
Q Consensus 189 ~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~ 249 (429)
..+.+.|.+.+ ++.|++|++++ |++|..+ ++++ | +.++++++||.||+|+|++...
T Consensus 189 ~~l~~~l~~~~-~~~G~~i~~~~~V~~i~~~-~~~v--V-~~~g~~~~ad~Vv~a~~~~~~~ 245 (421)
T 3nrn_A 189 KAVIDELERII-MENKGKILTRKEVVEINIE-EKKV--Y-TRDNEEYSFDVAISNVGVRETV 245 (421)
T ss_dssp HHHHHHHHHHH-HTTTCEEESSCCEEEEETT-TTEE--E-ETTCCEEECSEEEECSCHHHHH
T ss_pred HHHHHHHHHHH-HHCCCEEEcCCeEEEEEEE-CCEE--E-EeCCcEEEeCEEEECCCHHHHH
Confidence 57888999999 88899999999 9999976 6665 5 4467899999999999987654
No 65
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.41 E-value=6.1e-12 Score=122.34 Aligned_cols=213 Identities=14% Similarity=0.093 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHHh--hh-------ccccc
Q 014198 190 LFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFEL--LA-------SMFRV 259 (429)
Q Consensus 190 ~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~~--~~-------~~~~~ 259 (429)
.+.+.|.+.+ .+.|++|++++ |++|..+ ++.++.|.+ ++.++.||.||+|++++....+. .. ..++.
T Consensus 235 ~l~~~l~~~l-~~~g~~i~~~~~V~~i~~~-~~~~~~v~~-~~~~~~ad~vv~a~p~~~~~~ll~~~~~~~~~~l~~~~~ 311 (477)
T 3nks_A 235 MLPQALETHL-TSRGVSVLRGQPVCGLSLQ-AEGRWKVSL-RDSSLEADHVISAIPASVLSELLPAEAAPLARALSAITA 311 (477)
T ss_dssp HHHHHHHHHH-HHTTCEEECSCCCCEEEEC-GGGCEEEEC-SSCEEEESEEEECSCHHHHHHHSCGGGHHHHHHHHTCCE
T ss_pred HHHHHHHHHH-HhcCCEEEeCCEEEEEEEc-CCceEEEEE-CCeEEEcCEEEECCCHHHHHHhccccCHHHHHHHhcCCC
Confidence 6888888888 77899999999 9999987 444345666 56689999999999987654331 00 01122
Q ss_pred ccceeeEEEecCCCCCCCCCceeEeeeccCCCCC--CCCCCCceEec---CCCcEEE---eccCCCCCCCCCCCCCCCCH
Q 014198 260 SGLKAHSIILEPKEADAITPHALFLSYYPAQGEG--GKPMDPEVYPR---PTGEVYL---CGMSSEQEVPDDPETVSGDP 331 (429)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~g~~~i---~g~~~~~~~~~~~~~~~~~~ 331 (429)
.+...-.+.++.+. .+......+.. ..+... ....+...+|. +.+..++ .|+...... ........++
T Consensus 312 ~~~~~v~l~~~~~~-~~~~~~g~l~~--~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~gg~~~~~~-~~~~~~~~~~ 387 (477)
T 3nks_A 312 VSVAVVNLQYQGAH-LPVQGFGHLVP--SSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTL-EASGCVLSQE 387 (477)
T ss_dssp EEEEEEEEEETTCC-CSSCSSEEECC--TTTCSSEEEEECHHHHCGGGSTTTTCEEEEEEECHHHHHHH-HHSSCCCCHH
T ss_pred CcEEEEEEEECCCC-CCCCCceEEcc--CCCCCCceEEEEeccccCCCCCCCCceEEEEEECCcccccc-ccccCCCCHH
Confidence 22222223333321 01111111110 000000 00000000110 1121111 121100000 0000012345
Q ss_pred HHHHHHHHHHHHhccccCc--ccccceeeeeecccCCCCCceeccCCC-----CCcEEEEec-CCCccchhhHHHHHHHH
Q 014198 332 ASIQVLKRVARTVSSHLGE--EAQVKAEQACFLPCTDDGVPVIGELPG-----IKGCYVGTG-HNCWGILNGPATGAALA 403 (429)
Q Consensus 332 ~~~~~l~~~~~~~~p~l~~--~~~~~~~~~g~r~~t~d~~p~ig~~~~-----~~~~~~~~G-~~~~G~~~a~~~a~~la 403 (429)
+..+.+++.+.++++...+ ...+.+++.++-.++++..+.++.+.. .+++++++. +.|.|+--+...|+.+|
T Consensus 388 ~~~~~~~~~L~~~~g~~~~~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~l~G~~~~G~gv~~a~~sg~~aA 467 (477)
T 3nks_A 388 LFQQRAQEAAATQLGLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAVNDCIESGRQAA 467 (477)
T ss_dssp HHHHHHHHHHHHHHCCCSCCSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTCSEEECSTTTSCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhcCCCEEEEccCCCCCcHHHHHHHHHHHH
Confidence 6667788888887743222 123333444544456665554443321 268888865 78888999999999999
Q ss_pred HHHhcC
Q 014198 404 ELVMDG 409 (429)
Q Consensus 404 ~~i~~g 409 (429)
+.|+..
T Consensus 468 ~~il~~ 473 (477)
T 3nks_A 468 VSVLGT 473 (477)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 998643
No 66
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.40 E-value=1.7e-12 Score=122.67 Aligned_cols=58 Identities=16% Similarity=0.252 Sum_probs=47.4
Q ss_pred ehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEcc---CCcEEEEEEeCCeEEEcCEEEEcCCCCc
Q 014198 187 HPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGE---GGRVESVMIEGGRVVESDAVVLALGPWS 247 (429)
Q Consensus 187 ~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~---~g~v~~v~~~~g~~i~ad~vV~a~G~~s 247 (429)
++..+.+.|.+.+ ++.|+++++++ |+++..++ ++. +.|.+.++ +++||.||+|+|.++
T Consensus 107 ~~~~l~~~L~~~~-~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 107 GAEQIVEMLKSEC-DKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp CTHHHHHHHHHHH-HHHTCEEECSCCEEEEEECCSCSSCC-EEEEETTE-EEEESEEEECCCCSS
T ss_pred CHHHHHHHHHHHH-HHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECCC-EEECCEEEECCCCcc
Confidence 5678888999999 88899999999 99998651 233 45776554 899999999999998
No 67
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.39 E-value=5.7e-11 Score=110.18 Aligned_cols=193 Identities=10% Similarity=-0.007 Sum_probs=96.8
Q ss_pred hhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchH-HH------------hhhcccccccceeeE
Q 014198 201 NDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGK-FE------------LLASMFRVSGLKAHS 266 (429)
Q Consensus 201 ~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~-~~------------~~~~~~~~~~~~~~~ 266 (429)
++.|++|++++ |++|..+ ++.+ .|.+.+|..+.+|.||+|+.+.... ++ ..-..++..+...-+
T Consensus 120 ~~~g~~i~~~~~V~~i~~~-~~~~-~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~~~~~~~l~~~~~~~~~~v~ 197 (342)
T 3qj4_A 120 KESGAEVYFRHRVTQINLR-DDKW-EVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISECQRQQLEAVSYSSRYALG 197 (342)
T ss_dssp HHHTCEEESSCCEEEEEEC-SSSE-EEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSCHHHHHHHHTCCBCCEEEEE
T ss_pred HhcCCEEEeCCEEEEEEEc-CCEE-EEEECCCCEEEcCEEEECCCHHHHHHHhcccccccCHHHHHHHhcCCccccEEEE
Confidence 33489999999 9999987 5554 4778778778999999999843211 11 001123333333334
Q ss_pred EEecCCCCCCCCCceeEeeeccCCCCCCCCCCCceE-----e-c---CCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHH
Q 014198 267 IILEPKEADAITPHALFLSYYPAQGEGGKPMDPEVY-----P-R---PTGEVYLCGMSSEQEVPDDPETVSGDPASIQVL 337 (429)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~---~~g~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l 337 (429)
+.++.+...+..-...+.. ... . -..++ | + +.+..+++-.+.... .. .....+++..+.+
T Consensus 198 l~~~~~~~~~~~~~g~~~~----~~~---~-~~~~~~~~~k~~r~~~~~~~~~v~~~~~~~~--~~-~~~~~~~~~~~~~ 266 (342)
T 3qj4_A 198 LFYEAGTKIDVPWAGQYIT----SNP---C-IRFVSIDNKKRNIESSEIGPSLVIHTTVPFG--VT-YLEHSIEDVQELV 266 (342)
T ss_dssp EECSSCC--CCSCSEEECS----SCS---S-EEEEEEHHHHTTCCCC-CCCEEEEEECHHHH--HH-TTTSCHHHHHHHH
T ss_pred EEECCCCccCCceeeEEcc----CCc---c-eEEEEccccCCCCCCCCCCceEEEECCHHHH--HH-hhcCCHHHHHHHH
Confidence 4444321001111111111 000 0 00011 1 0 112233222221100 00 0112356677899
Q ss_pred HHHHHHhccccCcc-cccceeeeeecccCCCCCceeccC--CCCCcEEEEe-cCCCccchhhHHHHHHHHHHHh
Q 014198 338 KRVARTVSSHLGEE-AQVKAEQACFLPCTDDGVPVIGEL--PGIKGCYVGT-GHNCWGILNGPATGAALAELVM 407 (429)
Q Consensus 338 ~~~~~~~~p~l~~~-~~~~~~~~g~r~~t~d~~p~ig~~--~~~~~~~~~~-G~~~~G~~~a~~~a~~la~~i~ 407 (429)
++.+.++++...+. .-..+.|..-.|...-. -..+.. ...++|++++ .+.|.|+--+...|..+|+.|+
T Consensus 267 ~~~l~~~~g~~~~p~~~~v~rW~~a~p~~~~~-~~~~~~~~~~~~~l~laGd~~~g~~v~~ai~sg~~aa~~i~ 339 (342)
T 3qj4_A 267 FQQLENILPGLPQPIATKCQKWRHSQVTNAAA-NCPGQMTLHHKPFLACGGDGFTQSNFDGCITSALCVLEALK 339 (342)
T ss_dssp HHHHHHHSCSCCCCSEEEEEEETTCSBSSCCS-SSCSCEEEETTTEEEECSGGGSCSSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhccCCCCCceeeeccccccccccccC-CCcceeEecCCccEEEEccccCCCCccHHHHHHHHHHHHHH
Confidence 99999998744331 12345665444432110 011212 2348888875 4556688888889999998884
No 68
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.38 E-value=1.4e-11 Score=112.07 Aligned_cols=138 Identities=17% Similarity=0.289 Sum_probs=88.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKK--GAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGP 130 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~--G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 130 (429)
.+||+|||||++|+++|++|+++ |++|+|||+....++..+..+..+...... . . ..++..+++..
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~--------~---~-~~~~L~~~Gv~ 146 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMR--------K---P-ADVFLDEVGVP 146 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEE--------T---T-THHHHHHHTCC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcc--------h---H-HHHHHHHcCCc
Confidence 58999999999999999999997 999999999973332222111111100000 0 0 12233344442
Q ss_pred CCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhh-cCcEEEE
Q 014198 131 DNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVND-YGLEVVI 209 (429)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~-~Gv~v~~ 209 (429)
+...+.+.. ..+...+.+.|.+.+ .+ .|+++++
T Consensus 147 ----~~~~G~~~~-----------------------------------------~~~~~d~~~~L~~~a-~~~~gV~i~~ 180 (344)
T 3jsk_A 147 ----YEDEGDYVV-----------------------------------------VKHAALFTSTVLSKV-LQRPNVKLFN 180 (344)
T ss_dssp ----CEECSSEEE-----------------------------------------ESCHHHHHHHHHHHH-HTCTTEEEEE
T ss_pred ----ccccCCeEE-----------------------------------------EecHHHHHHHHHHHH-HhCCCCEEEe
Confidence 111111111 113456778899888 65 6999999
Q ss_pred ce-EEEEEEccC----------------C--cEEEEEEe--------------CCeEEEcCEEEEcCCCCch
Q 014198 210 GK-VERVGVGEG----------------G--RVESVMIE--------------GGRVVESDAVVLALGPWSG 248 (429)
Q Consensus 210 ~~-v~~i~~~~~----------------g--~v~~v~~~--------------~g~~i~ad~vV~a~G~~s~ 248 (429)
++ |+++..+++ + ++.+|.+. +..+|+|+.||+|||..+.
T Consensus 181 ~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~ 252 (344)
T 3jsk_A 181 ATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGP 252 (344)
T ss_dssp TEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSS
T ss_pred CCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCch
Confidence 99 999987632 3 67777663 2257999999999998876
No 69
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.37 E-value=9.3e-13 Score=129.77 Aligned_cols=169 Identities=9% Similarity=0.041 Sum_probs=90.2
Q ss_pred ehHHHHHHHHHHHHhhcC--cEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHHhhhcccc-cccc
Q 014198 187 HPQLFTKTLLNKAVNDYG--LEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFELLASMFR-VSGL 262 (429)
Q Consensus 187 ~~~~l~~~l~~~~~~~~G--v~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~~~~~~~~-~~~~ 262 (429)
...++.+++...+ ++.+ .++++++ |+++..++++..+.|++.+|.+++||.||+|+|.++.... ..+| +...
T Consensus 92 ~~~~i~~yl~~~~-~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~---p~i~G~~~f 167 (542)
T 1w4x_A 92 SQPEILRYINFVA-DKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQL---PNFPGLKDF 167 (542)
T ss_dssp BHHHHHHHHHHHH-HHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCCC---CCCTTGGGC
T ss_pred CHHHHHHHHHHHH-HHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCCC---CCCCCcccC
Confidence 3455666666666 5555 6799999 9999886444456688888888999999999998875443 1111 2223
Q ss_pred eeeEEEecCCC-C-CCC-CCceeEeeeccCCCCCCCCCCCceEe---cCCCcEEEeccCCCCCCCCCCCCCCCCHHHHHH
Q 014198 263 KAHSIILEPKE-A-DAI-TPHALFLSYYPAQGEGGKPMDPEVYP---RPTGEVYLCGMSSEQEVPDDPETVSGDPASIQV 336 (429)
Q Consensus 263 ~~~~~~~~~~~-~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~i~g~~~~~~~~~~~~~~~~~~~~~~~ 336 (429)
+++.+...... . ..+ .+...+..... ....+-+ .....+.++..+.....+ ..+......
T Consensus 168 ~G~~~hs~~~~~~~~~~~gk~V~VIG~G~--------sg~e~a~~l~~~~~~vtv~~r~~~~~~p------~~~~~~~~~ 233 (542)
T 1w4x_A 168 AGNLYHTGNWPHEPVDFSGQRVGVIGTGS--------SGIQVSPQIAKQAAELFVFQRTPHFAVP------ARNAPLDPE 233 (542)
T ss_dssp CSEEEEGGGCCSSCCCCBTCEEEEECCSH--------HHHHHHHHHHHHBSEEEEEESSCCCEEE------CCCCBCCHH
T ss_pred CCceEECCCCCCchhccCCCEEEEECCCc--------cHHHHHHHHhhcCceEEEEEcCCccccc------CCCCCCCHH
Confidence 34444432111 0 011 11222222100 0000000 011223333322111000 011112244
Q ss_pred HHHHHHHhccccCcccccceeeeeecccCCCCCceeccCC
Q 014198 337 LKRVARTVSSHLGEEAQVKAEQACFLPCTDDGVPVIGELP 376 (429)
Q Consensus 337 l~~~~~~~~p~l~~~~~~~~~~~g~r~~t~d~~p~ig~~~ 376 (429)
+.+.+++.+|.+.. . ....|.|+ ++++|..|+++..+
T Consensus 234 ~~~~~~~~~p~l~~-~-~~~~~~G~-~~~~d~~~~~~~~~ 270 (542)
T 1w4x_A 234 FLADLKKRYAEFRE-E-SRNTPGGT-HRYQGPKSALEVSD 270 (542)
T ss_dssp HHHHHHTTHHHHHH-H-HHTSSSSS-CCCCCCSCTTTSCH
T ss_pred HHHHHHhhCHHHHH-H-HHhhcccc-ccCccccchhcCCH
Confidence 55666777887766 4 55778888 99999999999765
No 70
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.37 E-value=1.3e-12 Score=124.56 Aligned_cols=139 Identities=23% Similarity=0.344 Sum_probs=101.1
Q ss_pred ccccCCCCCCCcc--CcceEE-EeeccccccceeeeecCCCCCCCCCCCCCCC-CCcEEEECCCHHHHHHHHHHHHCCCc
Q 014198 3 ATLLAPSSAPTYL--PGLRLT-LIGSRKLSKTTTFINCSAAQASPPMDGQRHS-KKHVAVCGGGIIGVCTAYFLAKKGAA 78 (429)
Q Consensus 3 ~~~~a~g~~p~~~--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~dvvIIGaGi~Gl~~A~~L~~~G~~ 78 (429)
.+|||||++|..+ ||.... ++..++..+...+.... .. ..+|+|||+|..|+.+|..|++.|.+
T Consensus 110 ~lvlAtG~~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~~------------~~~~~~vvViGgG~~g~e~A~~l~~~g~~ 177 (415)
T 3lxd_A 110 KLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAEL------------DAGAKNAVVIGGGYIGLEAAAVLTKFGVN 177 (415)
T ss_dssp EEEECCCEECCCCBTTSSCCBTEECCCSHHHHHHHHHHH------------HTTCCEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred EEEEccCCccCCCCCCCccccCEEEEcCHHHHHHHHHHh------------hhcCCeEEEECCCHHHHHHHHHHHhcCCe
Confidence 5899999999886 565433 44433332222211100 11 46899999999999999999999999
Q ss_pred EEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccc
Q 014198 79 VTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNK 158 (429)
Q Consensus 79 V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (429)
|+++++.+.. +. .
T Consensus 178 Vtvv~~~~~~-------------------------------l~-------~----------------------------- 190 (415)
T 3lxd_A 178 VTLLEALPRV-------------------------------LA-------R----------------------------- 190 (415)
T ss_dssp EEEEESSSST-------------------------------TT-------T-----------------------------
T ss_pred EEEEecCCch-------------------------------hh-------h-----------------------------
Confidence 9999998710 00 0
Q ss_pred cCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcC
Q 014198 159 ANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESD 237 (429)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad 237 (429)
..+..+.+.+.+.+ ++.|+++++++ |+++..+ ++++..|++.+|.++.||
T Consensus 191 ---------------------------~~~~~~~~~l~~~l-~~~GV~i~~~~~v~~i~~~-~~~v~~v~l~dG~~i~aD 241 (415)
T 3lxd_A 191 ---------------------------VAGEALSEFYQAEH-RAHGVDLRTGAAMDCIEGD-GTKVTGVRMQDGSVIPAD 241 (415)
T ss_dssp ---------------------------TSCHHHHHHHHHHH-HHTTCEEEETCCEEEEEES-SSBEEEEEESSSCEEECS
T ss_pred ---------------------------hcCHHHHHHHHHHH-HhCCCEEEECCEEEEEEec-CCcEEEEEeCCCCEEEcC
Confidence 00122333666777 78899999999 9999986 778888999899999999
Q ss_pred EEEEcCCCCchH
Q 014198 238 AVVLALGPWSGK 249 (429)
Q Consensus 238 ~vV~a~G~~s~~ 249 (429)
.||+|+|...+.
T Consensus 242 ~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 242 IVIVGIGIVPCV 253 (415)
T ss_dssp EEEECSCCEESC
T ss_pred EEEECCCCccCh
Confidence 999999987765
No 71
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.37 E-value=5.9e-12 Score=123.17 Aligned_cols=62 Identities=19% Similarity=0.217 Sum_probs=53.1
Q ss_pred eeEehHHHHHHHHHHHHhh-cCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCch
Q 014198 184 AQVHPQLFTKTLLNKAVND-YGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSG 248 (429)
Q Consensus 184 ~~~~~~~l~~~l~~~~~~~-~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~ 248 (429)
..+++..+.+.|.+.+ ++ .|++++ ++ |+++..+ ++++.+|.+.+|..+.||.||+|||.++.
T Consensus 118 ~~~Dr~~~~~~L~~~L-e~~~GVeI~-~~~Vt~L~~e-~g~V~GV~t~dG~~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 118 AQADKKRYREYMKKVC-ENQENLYIK-QEEVVDIIVK-NNQVVGVRTNLGVEYKTKAVVVTTGTFLN 181 (637)
T ss_dssp EEECHHHHHHHHHHHH-HTCTTEEEE-ESCEEEEEES-SSBEEEEEETTSCEEECSEEEECCTTCBT
T ss_pred hhCCHHHHHHHHHHHH-HhCCCCEEE-EeEEEEEEec-CCEEEEEEECCCcEEEeCEEEEccCCCcc
Confidence 4678888999999998 66 699995 56 9999887 78888899988889999999999998754
No 72
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.36 E-value=4.8e-12 Score=124.32 Aligned_cols=152 Identities=20% Similarity=0.254 Sum_probs=92.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC--CccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS--VACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNG 129 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~--~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 129 (429)
..+||+|||||++|+++|+.|++.|.+|+|||+.. ++...+..+.|.+. ...+.+++.. ++.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia---------------~~~lv~ei~a-lgg 90 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIG---------------KGHLVKEVDA-LGG 90 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTT---------------HHHHHHHHHH-TTC
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchh---------------hHHHHHHHHH-hcc
Confidence 36899999999999999999999999999999974 33211111101000 0022222211 111
Q ss_pred CCCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhh-cCcEEE
Q 014198 130 PDNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVND-YGLEVV 208 (429)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~-~Gv~v~ 208 (429)
.........+ +.+.. +.... .. ........+++..+.+.|.+.+ ++ .|++++
T Consensus 91 ~~~~~~d~~g-i~f~~---------------------l~~~k---gp-av~~~r~~~Dr~~~~~~L~e~L-e~~~GV~I~ 143 (651)
T 3ces_A 91 LMAKAIDQAG-IQFRI---------------------LNASK---GP-AVRATRAQADRVLYRQAVRTAL-ENQPNLMIF 143 (651)
T ss_dssp SHHHHHHHHE-EEEEE---------------------ESTTS---CG-GGCEEEEEECHHHHHHHHHHHH-HTCTTEEEE
T ss_pred HHHHHhhhcc-cchhh---------------------hhccc---Cc-ccccchhhCCHHHHHHHHHHHH-HhCCCCEEE
Confidence 0000000000 00000 00000 00 0011224678888999999998 66 699995
Q ss_pred Ece-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCch
Q 014198 209 IGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSG 248 (429)
Q Consensus 209 ~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~ 248 (429)
++ |+++..+ ++++.+|.+.+|..+.||.||+|||.++.
T Consensus 144 -~~~V~~L~~e-~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 144 -QQAVEDLIVE-NDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp -ECCEEEEEES-SSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred -EEEEEEEEec-CCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 56 9999887 77888899988888999999999999864
No 73
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.35 E-value=1.1e-12 Score=124.55 Aligned_cols=140 Identities=24% Similarity=0.348 Sum_probs=101.1
Q ss_pred cccccCCCCCCCcc--CcceEE-EeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCc
Q 014198 2 AATLLAPSSAPTYL--PGLRLT-LIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAA 78 (429)
Q Consensus 2 ~~~~~a~g~~p~~~--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~ 78 (429)
-.+|||||++|..| ||.... ++..++..+...+.... ....+++|||+|..|+.+|..|++.|.+
T Consensus 100 d~lvlAtG~~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~~------------~~~~~vvViGgG~~g~e~A~~l~~~g~~ 167 (404)
T 3fg2_P 100 GHLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQRM------------PDKKHVVVIGAGFIGLEFAATARAKGLE 167 (404)
T ss_dssp SEEEECCCEEECCCCSTTTTSTTEECCSSHHHHHHHHHHG------------GGCSEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred CEEEEeeCCCccCCCCCCCCCCcEEEECCHHHHHHHHHHh------------hcCCeEEEECCCHHHHHHHHHHHhCCCE
Confidence 36899999998876 564432 44433332222221111 1246899999999999999999999999
Q ss_pred EEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccc
Q 014198 79 VTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNK 158 (429)
Q Consensus 79 V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (429)
|+++++.+.. +. .
T Consensus 168 Vtvv~~~~~~-------------------------------~~-------~----------------------------- 180 (404)
T 3fg2_P 168 VDVVELAPRV-------------------------------MA-------R----------------------------- 180 (404)
T ss_dssp EEEECSSSST-------------------------------TT-------T-----------------------------
T ss_pred EEEEeCCCcc-------------------------------hh-------h-----------------------------
Confidence 9999998610 00 0
Q ss_pred cCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcC
Q 014198 159 ANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESD 237 (429)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad 237 (429)
..+..+.+.+.+.+ ++.|+++++++ |+++..+ ++++.+|++.+|.++.||
T Consensus 181 ---------------------------~~~~~~~~~l~~~l-~~~GV~i~~~~~v~~i~~~-~~~v~~V~~~dG~~i~aD 231 (404)
T 3fg2_P 181 ---------------------------VVTPEISSYFHDRH-SGAGIRMHYGVRATEIAAE-GDRVTGVVLSDGNTLPCD 231 (404)
T ss_dssp ---------------------------TSCHHHHHHHHHHH-HHTTCEEECSCCEEEEEEE-TTEEEEEEETTSCEEECS
T ss_pred ---------------------------ccCHHHHHHHHHHH-HhCCcEEEECCEEEEEEec-CCcEEEEEeCCCCEEEcC
Confidence 00122334677777 78899999999 9999887 677888999899999999
Q ss_pred EEEEcCCCCchH
Q 014198 238 AVVLALGPWSGK 249 (429)
Q Consensus 238 ~vV~a~G~~s~~ 249 (429)
.||+|+|...+.
T Consensus 232 ~Vv~a~G~~p~~ 243 (404)
T 3fg2_P 232 LVVVGVGVIPNV 243 (404)
T ss_dssp EEEECCCEEECC
T ss_pred EEEECcCCccCH
Confidence 999999987664
No 74
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.35 E-value=8.2e-12 Score=122.61 Aligned_cols=156 Identities=21% Similarity=0.267 Sum_probs=93.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC--CccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS--VACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELN 128 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~--~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 128 (429)
...+||+|||||++|+++|+.|++.|.+|+|||+.. ++......+.|.+. ...+++++...-+
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia---------------~~~lv~el~al~g 83 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVA---------------KGQITREIDALGG 83 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHH---------------HHHHHHHHHHHTC
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhh---------------HHHHHHHHHhccc
Confidence 346899999999999999999999999999999984 33211111111110 0122222221111
Q ss_pred CCCCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhh-cCcEE
Q 014198 129 GPDNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVND-YGLEV 207 (429)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~-~Gv~v 207 (429)
.. .......+ +.+..... .. .. ........+++..+.+.+.+.+ ++ .|+++
T Consensus 84 ~~-~~~~d~~g-i~f~~l~~------------~k------gp-------av~~~r~~~Dr~~l~~~L~~~l-~~~~GV~I 135 (641)
T 3cp8_A 84 EM-GKAIDATG-IQFRMLNR------------SK------GP-------AMHSPRAQADKTQYSLYMRRIV-EHEPNIDL 135 (641)
T ss_dssp SH-HHHHHHHE-EEEEEECS------------SS------CT-------TTCEEEEEECHHHHHHHHHHHH-HTCTTEEE
T ss_pred HH-HHHHHhcC-Cchhhccc------------cc------Cc-------cccchhhhcCHHHHHHHHHHHH-HhCCCCEE
Confidence 00 00000000 00000000 00 00 0001224678889999999988 66 59999
Q ss_pred EEceEEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHH
Q 014198 208 VIGKVERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKF 250 (429)
Q Consensus 208 ~~~~v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~ 250 (429)
+.+.|+++..+ ++++.+|.+.+|..+.||.||+|||.++...
T Consensus 136 ~~~~V~~L~~d-~g~V~GV~t~~G~~i~Ad~VVLATG~~s~~~ 177 (641)
T 3cp8_A 136 LQDTVIGVSAN-SGKFSSVTVRSGRAIQAKAAILACGTFLNGL 177 (641)
T ss_dssp EECCEEEEEEE-TTEEEEEEETTSCEEEEEEEEECCTTCBTCE
T ss_pred EeeEEEEEEec-CCEEEEEEECCCcEEEeCEEEECcCCCCCcc
Confidence 65449999877 7778888888888999999999999886543
No 75
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.35 E-value=5.5e-12 Score=115.02 Aligned_cols=114 Identities=18% Similarity=0.241 Sum_probs=76.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGP 130 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 130 (429)
.+.+||+|||||++|+++|+.|+++|++|+|+|++.+++..+.+..++
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~-------------------------------- 51 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGF-------------------------------- 51 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCS--------------------------------
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCc--------------------------------
Confidence 457999999999999999999999999999999987543211100000
Q ss_pred CCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcC-cEEEE
Q 014198 131 DNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYG-LEVVI 209 (429)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~G-v~v~~ 209 (429)
.....+.+..+.+...+.+ .+.+ +.++.
T Consensus 52 --------------------------------------------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 80 (304)
T 4fk1_A 52 --------------------------------------------------ITRDGIKPEEFKEIGLNEV-MKYPSVHYYE 80 (304)
T ss_dssp --------------------------------------------------TTCTTBCHHHHHHHHHHHH-TTSTTEEEEE
T ss_pred --------------------------------------------------cCCCCCCHHHHHHHHHHHH-HhcCCEEEEe
Confidence 0000134455555666666 4444 55555
Q ss_pred ceEEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCch
Q 014198 210 GKVERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSG 248 (429)
Q Consensus 210 ~~v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~ 248 (429)
.+++.+...+++. ..+.+.++.++++|.||+|||....
T Consensus 81 ~~~~~~~~~~~~~-~~v~~~~g~~~~a~~liiATGs~p~ 118 (304)
T 4fk1_A 81 KTVVMITKQSTGL-FEIVTKDHTKYLAERVLLATGMQEE 118 (304)
T ss_dssp CCEEEEEECTTSC-EEEEETTCCEEEEEEEEECCCCEEE
T ss_pred eEEEEeeecCCCc-EEEEECCCCEEEeCEEEEccCCccc
Confidence 5577776653443 4577888899999999999997543
No 76
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.34 E-value=7.2e-12 Score=125.10 Aligned_cols=177 Identities=13% Similarity=0.123 Sum_probs=102.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC------CCcEEEEcCCCCccccccccCC--eeeeccCCCC----------------
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKK------GAAVTLIEKSSVACAASGKAGG--FLALDWCDGG---------------- 107 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~------G~~V~lie~~~~~~~~s~~~~g--~~~~~~~~~~---------------- 107 (429)
.++||||||||++|+++|+.|+++ |.+|+||||..+..+++. +.| -++..+....
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s~s~-AqG~~gi~a~l~~ds~e~~~~~~~~~~~gl~ 99 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERSGAV-AQGLSAINTYLGDNNADDYVRMVRTDLMGLV 99 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTCSTT-TTCEEEECCCCTTSCHHHHHHHHHHHTTTCC
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCCccc-ccCcchheeecCCCCHHHHHHHHHHhcCCCc
Confidence 358999999999999999999997 999999999987665554 455 3332222111
Q ss_pred ---cchhhhHHHHHHHHHHHHHhCCCCCcCee-eeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccc
Q 014198 108 ---PLSSLARASFNLHRSLAEELNGPDNYGYR-ALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTT 183 (429)
Q Consensus 108 ---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 183 (429)
....++.++.+....+. ..+.. +... ..|.+........+ + -+..........+ ...
T Consensus 100 d~~~v~~l~~~a~~~i~~L~-~~Gv~--f~~~~~~G~~~~g~~~~~f----------g----~~~~~gg~~~~r~--~~~ 160 (662)
T 3gyx_A 100 REDLIYDLGRHVDDSVHLFE-EWGLP--VWIKDEHGHNLDGAQAKAA----------G----KSLRNGDKPVRSG--RWQ 160 (662)
T ss_dssp CHHHHHHHHHHHHHHHHHHH-HHTCC--BCEECSSSCEECHHHHHHH----------T----CCTTTTCCBCCSS--TTC
T ss_pred cHHHHHHHHHHHHHHHHHHH-HcCCC--ceecCCCCccccchhhhcc----------c----cccccCccccccc--eec
Confidence 01122333333333332 34431 1111 11111100000000 0 0000000000000 112
Q ss_pred eeEehHHHHHHHHHHHHhhc--CcEEEEce-EEEEEEccC--CcEEEEEEe---CC--eEEEcCEEEEcCCCCchH
Q 014198 184 AQVHPQLFTKTLLNKAVNDY--GLEVVIGK-VERVGVGEG--GRVESVMIE---GG--RVVESDAVVLALGPWSGK 249 (429)
Q Consensus 184 ~~~~~~~l~~~l~~~~~~~~--Gv~v~~~~-v~~i~~~~~--g~v~~v~~~---~g--~~i~ad~vV~a~G~~s~~ 249 (429)
..++...+.+.|.+.+ ++. |++|+.++ |+++..+++ +++.+|... ++ ..+.|+.||+|||+++..
T Consensus 161 ~~~~G~~i~~~L~~~a-~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~~ 235 (662)
T 3gyx_A 161 IMINGESYKVIVAEAA-KNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVNV 235 (662)
T ss_dssp EEEEETSHHHHHHHHH-HHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred ccCCHHHHHHHHHHHH-HhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccccc
Confidence 3456678888999988 666 99999999 999988733 388888653 34 368999999999998753
No 77
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.34 E-value=5.4e-13 Score=126.93 Aligned_cols=138 Identities=25% Similarity=0.379 Sum_probs=98.9
Q ss_pred cccccCCCCCCCcc--CcceEE-EeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCc
Q 014198 2 AATLLAPSSAPTYL--PGLRLT-LIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAA 78 (429)
Q Consensus 2 ~~~~~a~g~~p~~~--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~ 78 (429)
-.+|||||++|..| ||.... ++..++..+...+.... ....+|+|||+|.+|+.+|..|++.|.+
T Consensus 101 d~lvlAtG~~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~~------------~~~~~vvViGgG~~g~E~A~~l~~~g~~ 168 (410)
T 3ef6_A 101 DAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSW------------TSATRLLIVGGGLIGCEVATTARKLGLS 168 (410)
T ss_dssp SEEEECCCEEECCCCCTTTTSTTEECCCSHHHHHHHHHHC------------CTTCEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred CEEEEccCCcccCCCCCCccccceEEeccHHHHHHHHHHh------------ccCCeEEEECCCHHHHHHHHHHHhCCCe
Confidence 36899999999877 665432 33443332222221111 2356899999999999999999999999
Q ss_pred EEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHH-HHHHhCCCCCcCeeeeeeeEEeecccccCCCCCcc
Q 014198 79 VTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRS-LAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSN 157 (429)
Q Consensus 79 V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (429)
|+++++.+. ++.. +.
T Consensus 169 Vtvv~~~~~-------------------------------~l~~~~~--------------------------------- 184 (410)
T 3ef6_A 169 VTILEAGDE-------------------------------LLVRVLG--------------------------------- 184 (410)
T ss_dssp EEEECSSSS-------------------------------SSHHHHC---------------------------------
T ss_pred EEEEecCCc-------------------------------cchhhcC---------------------------------
Confidence 999999871 1110 11
Q ss_pred ccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEc
Q 014198 158 KANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVES 236 (429)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~a 236 (429)
..+.+.+.+.+ ++.|+++++++ |+++..+ + ++..|++.+|+++.+
T Consensus 185 -------------------------------~~~~~~l~~~l-~~~GV~i~~~~~v~~i~~~-~-~~~~v~~~dg~~i~a 230 (410)
T 3ef6_A 185 -------------------------------RRIGAWLRGLL-TELGVQVELGTGVVGFSGE-G-QLEQVMASDGRSFVA 230 (410)
T ss_dssp -------------------------------HHHHHHHHHHH-HHHTCEEECSCCEEEEECS-S-SCCEEEETTSCEEEC
T ss_pred -------------------------------HHHHHHHHHHH-HHCCCEEEeCCEEEEEecc-C-cEEEEEECCCCEEEc
Confidence 12223666777 77899999999 9999864 3 556788888999999
Q ss_pred CEEEEcCCCCchH
Q 014198 237 DAVVLALGPWSGK 249 (429)
Q Consensus 237 d~vV~a~G~~s~~ 249 (429)
|.||+|+|..++.
T Consensus 231 D~Vv~a~G~~p~~ 243 (410)
T 3ef6_A 231 DSALICVGAEPAD 243 (410)
T ss_dssp SEEEECSCEEECC
T ss_pred CEEEEeeCCeecH
Confidence 9999999987764
No 78
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.33 E-value=4.1e-11 Score=113.54 Aligned_cols=154 Identities=17% Similarity=0.114 Sum_probs=92.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPD 131 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 131 (429)
..+||+|||||++|+++|+.|+++|++|+|+|+.+... +....|+. +...+.+++ +.++...
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~--~~~~~g~~------------l~~~~~~~l----~~~g~~~ 65 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPL--SGFGTGIV------------VQPELVHYL----LEQGVEL 65 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC--CCCSCEEE------------CCHHHHHHH----HHTTCCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCC--Cccccccc------------cChhHHHHH----HHcCCcc
Confidence 35799999999999999999999999999999986311 11111111 111222333 3333311
Q ss_pred -CcCeeeeeeeEEeec-ccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEE
Q 014198 132 -NYGYRALTTLSLTVT-ESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVI 209 (429)
Q Consensus 132 -~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~ 209 (429)
..... .....+... ... ... ........++...+.+.|.+.+ .|+++++
T Consensus 66 ~~~~~~-~~~~~~~~~~~g~---------------------~~~----~~~~~~~~~~~~~l~~~L~~~~---~~~~i~~ 116 (397)
T 2vou_A 66 DSISVP-SSSMEYVDALTGE---------------------RVG----SVPADWRFTSYDSIYGGLYELF---GPERYHT 116 (397)
T ss_dssp GGTCBC-CCEEEEEETTTCC---------------------EEE----EEECCCCEEEHHHHHHHHHHHH---CSTTEET
T ss_pred cccccc-ccceEEEecCCCC---------------------ccc----cccCcccccCHHHHHHHHHHhC---CCcEEEc
Confidence 00000 001111110 000 000 0000112345567777777665 4899999
Q ss_pred ce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHHhhh
Q 014198 210 GK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFELLA 254 (429)
Q Consensus 210 ~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~~~~ 254 (429)
++ |++++.+ ++.+ .|++.+|.++++|.||.|+|.+|.....++
T Consensus 117 ~~~v~~i~~~-~~~v-~v~~~~g~~~~ad~vV~AdG~~S~vr~~~~ 160 (397)
T 2vou_A 117 SKCLVGLSQD-SETV-QMRFSDGTKAEANWVIGADGGASVVRKRLL 160 (397)
T ss_dssp TCCEEEEEEC-SSCE-EEEETTSCEEEESEEEECCCTTCHHHHHHH
T ss_pred CCEEEEEEec-CCEE-EEEECCCCEEECCEEEECCCcchhHHHHhc
Confidence 99 9999987 4444 477878889999999999999998776555
No 79
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.32 E-value=2.2e-12 Score=121.64 Aligned_cols=137 Identities=21% Similarity=0.284 Sum_probs=97.3
Q ss_pred ccccCCCCCCCcc--CcceE-EEeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcE
Q 014198 3 ATLLAPSSAPTYL--PGLRL-TLIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAV 79 (429)
Q Consensus 3 ~~~~a~g~~p~~~--~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V 79 (429)
.+|||||++|..| ||... .+++.+++.+...+.... ....+++|||+|.+|+++|..|++.|.+|
T Consensus 104 ~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~------------~~~~~v~ViGgG~~g~e~A~~l~~~g~~V 171 (384)
T 2v3a_A 104 DLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAA------------AGKRRVLLLGAGLIGCEFANDLSSGGYQL 171 (384)
T ss_dssp EEEECCCEEECCCCCBSTTTTCEEECSSHHHHHHHHHHH------------TTCCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred EEEEeCCCCcCCCCCCCcCcCCEEEECCHHHHHHHHHhh------------ccCCeEEEECCCHHHHHHHHHHHhCCCeE
Confidence 5899999999876 45431 144444433222111000 12468999999999999999999999999
Q ss_pred EEEcCCC-CccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccc
Q 014198 80 TLIEKSS-VACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNK 158 (429)
Q Consensus 80 ~lie~~~-~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (429)
+++|+.+ +.. .
T Consensus 172 tlv~~~~~~~~---------------------------------------~----------------------------- 183 (384)
T 2v3a_A 172 DVVAPCEQVMP---------------------------------------G----------------------------- 183 (384)
T ss_dssp EEEESSSSSST---------------------------------------T-----------------------------
T ss_pred EEEecCcchhh---------------------------------------c-----------------------------
Confidence 9999976 110 0
Q ss_pred cCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcC
Q 014198 159 ANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESD 237 (429)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad 237 (429)
..+..+.+.+.+.+ ++.|+++++++ |+++..+ ++. ..|++.+|.++.+|
T Consensus 184 ---------------------------~~~~~~~~~l~~~l-~~~gv~i~~~~~v~~i~~~-~~~-~~v~~~~g~~i~~d 233 (384)
T 2v3a_A 184 ---------------------------LLHPAAAKAVQAGL-EGLGVRFHLGPVLASLKKA-GEG-LEAHLSDGEVIPCD 233 (384)
T ss_dssp ---------------------------TSCHHHHHHHHHHH-HTTTCEEEESCCEEEEEEE-TTE-EEEEETTSCEEEES
T ss_pred ---------------------------ccCHHHHHHHHHHH-HHcCCEEEeCCEEEEEEec-CCE-EEEEECCCCEEECC
Confidence 00122334677777 78899999999 9999876 443 35777788899999
Q ss_pred EEEEcCCCCchH
Q 014198 238 AVVLALGPWSGK 249 (429)
Q Consensus 238 ~vV~a~G~~s~~ 249 (429)
.||+|+|.+++.
T Consensus 234 ~vv~a~G~~p~~ 245 (384)
T 2v3a_A 234 LVVSAVGLRPRT 245 (384)
T ss_dssp EEEECSCEEECC
T ss_pred EEEECcCCCcCH
Confidence 999999987764
No 80
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.31 E-value=3.9e-11 Score=120.22 Aligned_cols=63 Identities=16% Similarity=0.137 Sum_probs=50.2
Q ss_pred eEehHHHHHHHHHHHHhhc-Cc-EEEEce-EEEEEEccCC---cEEEEEE---eCCe--EEEcCEEEEcCCCCchH
Q 014198 185 QVHPQLFTKTLLNKAVNDY-GL-EVVIGK-VERVGVGEGG---RVESVMI---EGGR--VVESDAVVLALGPWSGK 249 (429)
Q Consensus 185 ~~~~~~l~~~l~~~~~~~~-Gv-~v~~~~-v~~i~~~~~g---~v~~v~~---~~g~--~i~ad~vV~a~G~~s~~ 249 (429)
.+++..+.+.|.+.+ ++. |+ +|++++ |+++..+ ++ +|.+|.. .++. .+.|+.||+|||+++..
T Consensus 147 ~~~g~~~~~~l~~~~-~~~~gv~~i~~~~~v~~L~~~-~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~ 220 (643)
T 1jnr_A 147 MIHGESYKPIIAEAA-KMAVGEENIYERVFIFELLKD-NNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLL 220 (643)
T ss_dssp EEEETTHHHHHHHHH-HHHHCGGGEECSEEEEEEEEC-TTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred CCCcHHHHHHHHHHH-HhcCCCcEEEecCEEEEEEEc-CCccceeEEEEEEEecCCcEEEEEcCEEEECCCccccc
Confidence 345667778888888 666 99 999999 9999987 55 8888765 3454 68999999999998864
No 81
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.31 E-value=2.3e-12 Score=124.22 Aligned_cols=137 Identities=16% Similarity=0.140 Sum_probs=95.6
Q ss_pred ccccCCCCCCCcc--CcceEE-EeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcE
Q 014198 3 ATLLAPSSAPTYL--PGLRLT-LIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAV 79 (429)
Q Consensus 3 ~~~~a~g~~p~~~--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V 79 (429)
.+|||||++|..| ||.... +++.+.+.+...+.... ....+++|||+|.+|+.+|..|++.|.+|
T Consensus 106 ~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~------------~~~~~vvViGgG~~g~E~A~~l~~~g~~V 173 (452)
T 3oc4_A 106 KLILATGASQFSTQIRGSQTEKLLKYKFLSGALAAVPLL------------ENSQTVAVIGAGPIGMEAIDFLVKMKKTV 173 (452)
T ss_dssp EEEECCCCCBCCCCCBTTTCTTEEEGGGCC----CCHHH------------HTCSEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred EEEECCCcccCCCCCCCCCCCCEEEeCCHHHHHHHHHHH------------hcCCEEEEECCCHHHHHHHHHHHhCCCeE
Confidence 5899999999876 455432 44444433322221111 23468999999999999999999999999
Q ss_pred EEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCcccc
Q 014198 80 TLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKA 159 (429)
Q Consensus 80 ~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (429)
+++++.+.. +.. .
T Consensus 174 tlv~~~~~~-------------------------------l~~------~------------------------------ 186 (452)
T 3oc4_A 174 HVFESLENL-------------------------------LPK------Y------------------------------ 186 (452)
T ss_dssp EEEESSSSS-------------------------------STT------T------------------------------
T ss_pred EEEEccCcc-------------------------------ccc------c------------------------------
Confidence 999998610 000 0
Q ss_pred CCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCE
Q 014198 160 NSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDA 238 (429)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~ 238 (429)
....+.+.+.+.+ ++.|+++++++ |++++.+ ++++ .|.++++ ++.+|.
T Consensus 187 ---------------------------~d~~~~~~l~~~l-~~~GV~i~~~~~v~~i~~~-~~~v-~v~~~~g-~i~aD~ 235 (452)
T 3oc4_A 187 ---------------------------FDKEMVAEVQKSL-EKQAVIFHFEETVLGIEET-ANGI-VLETSEQ-EISCDS 235 (452)
T ss_dssp ---------------------------CCHHHHHHHHHHH-HTTTEEEEETCCEEEEEEC-SSCE-EEEESSC-EEEESE
T ss_pred ---------------------------CCHHHHHHHHHHH-HHcCCEEEeCCEEEEEEcc-CCeE-EEEECCC-EEEeCE
Confidence 0012333677777 88899999999 9999876 5665 6777655 899999
Q ss_pred EEEcCCCCchH
Q 014198 239 VVLALGPWSGK 249 (429)
Q Consensus 239 vV~a~G~~s~~ 249 (429)
||+|+|...+.
T Consensus 236 Vv~A~G~~p~~ 246 (452)
T 3oc4_A 236 GIFALNLHPQL 246 (452)
T ss_dssp EEECSCCBCCC
T ss_pred EEECcCCCCCh
Confidence 99999976543
No 82
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.31 E-value=4.4e-11 Score=108.16 Aligned_cols=140 Identities=23% Similarity=0.276 Sum_probs=87.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKK--GAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGP 130 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~--G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 130 (429)
.+||+|||||++|+++|+.|+++ |++|+|+|+....++..+..+..+...... . + ...+..+++..
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~--------~---~-~~~~L~~~Gv~ 132 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMR--------K---P-AHLFLQELEIP 132 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEE--------T---T-THHHHHHTTCC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhh--------h---H-HHHHHHhhCcc
Confidence 46999999999999999999998 999999999884333322222111110000 0 0 02223334432
Q ss_pred CCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhh-cCcEEEE
Q 014198 131 DNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVND-YGLEVVI 209 (429)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~-~Gv~v~~ 209 (429)
+...+.+.. ..+...+...|.+.+ .+ .|++++.
T Consensus 133 ----~~~~g~~~~-----------------------------------------~~~~~~~~~~L~~~a-~~~~GV~i~~ 166 (326)
T 2gjc_A 133 ----YEDEGDYVV-----------------------------------------VKHAALFISTVLSKV-LQLPNVKLFN 166 (326)
T ss_dssp ----CEECSSEEE-----------------------------------------ESCHHHHHHHHHHHH-HTSTTEEEET
T ss_pred ----cccCCCeEE-----------------------------------------EcchHHHHHHHHHHH-HHhcCcEEEe
Confidence 111111111 113456788888888 55 5999999
Q ss_pred ce-EEEEEEcc--C-C--cEEEEEEe--------------CCeEEEc---------------CEEEEcCCCCchHH
Q 014198 210 GK-VERVGVGE--G-G--RVESVMIE--------------GGRVVES---------------DAVVLALGPWSGKF 250 (429)
Q Consensus 210 ~~-v~~i~~~~--~-g--~v~~v~~~--------------~g~~i~a---------------d~vV~a~G~~s~~~ 250 (429)
++ |+++..++ + + +|.+|.+. +..++.| |.||.|||..+...
T Consensus 167 ~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~ 242 (326)
T 2gjc_A 167 ATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFG 242 (326)
T ss_dssp TEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CC
T ss_pred cceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHH
Confidence 99 99998763 2 4 88888763 2357889 99999999766433
No 83
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.31 E-value=6.7e-11 Score=114.86 Aligned_cols=203 Identities=13% Similarity=0.116 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHHhhhc------ccccccc
Q 014198 190 LFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFELLAS------MFRVSGL 262 (429)
Q Consensus 190 ~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~~~~~------~~~~~~~ 262 (429)
.+.+.|.+.+ .+ ++|++++ |++|+.+ ++.+ .|++.+| +++||.||+|++++...-+.... .++..+.
T Consensus 237 ~l~~~l~~~l-~~--~~i~~~~~V~~i~~~-~~~~-~v~~~~g-~~~ad~vV~a~p~~~~~~ll~~~~~~~~~~~~~~~~ 310 (475)
T 3lov_A 237 SLIERLEEVL-ER--SEIRLETPLLAISRE-DGRY-RLKTDHG-PEYADYVLLTIPHPQVVQLLPDAHLPELEQLTTHST 310 (475)
T ss_dssp HHHHHHHHHC-SS--CEEESSCCCCEEEEE-TTEE-EEECTTC-CEEESEEEECSCHHHHHHHCTTSCCHHHHTCCEEEE
T ss_pred HHHHHHHhhc-cC--CEEEcCCeeeEEEEe-CCEE-EEEECCC-eEECCEEEECCCHHHHHHHcCccCHHHHhcCCCCeE
Confidence 4555555555 22 7999999 9999987 5544 4777777 89999999999987744331111 1233333
Q ss_pred eeeEEEecCCCCCCCCCceeEeeeccCCCCCCCCCCC--ceE-----e--cCCCcEEEeccCCCCCCCCCCCCCCCCHHH
Q 014198 263 KAHSIILEPKEADAITPHALFLSYYPAQGEGGKPMDP--EVY-----P--RPTGEVYLCGMSSEQEVPDDPETVSGDPAS 333 (429)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----~--~~~g~~~i~g~~~~~~~~~~~~~~~~~~~~ 333 (429)
....+.++.+...+......+... .. .... ..+ + .++ ..++.+..... . ........+++.
T Consensus 311 ~~v~l~~~~~~~~~~~g~g~l~~~---~~----~~~~~~~~~~s~~~~~~~p~-~~~l~~~~~~~-~-~~~~~~~~~e~~ 380 (475)
T 3lov_A 311 ATVTMIFDQQQSLPIEGTGFVVNR---RA----PYSITACTAIDQKWNHSAPD-HTVLRAFVGRP-G-NDHLVHESDEVL 380 (475)
T ss_dssp EEEEEEEECCSSCSSSSSEEEECT---TS----SCSEEEEEEHHHHCTTTCTT-EEEEEEEECBT-T-BCGGGGSCHHHH
T ss_pred EEEEEEECCcCCCCCCCEEEEecC---CC----CCceEEEEEEcccCCCCCCC-cEEEEEEeCCC-C-CCcccCCCHHHH
Confidence 344444544321111111111110 00 0000 011 1 122 22222211000 0 011112245667
Q ss_pred HHHHHHHHHHhccccCc-ccccceeeeeecc-cCCCCCce---ecc-C-CCCCcEEEEe-cCCCccchhhHHHHHHHHHH
Q 014198 334 IQVLKRVARTVSSHLGE-EAQVKAEQACFLP-CTDDGVPV---IGE-L-PGIKGCYVGT-GHNCWGILNGPATGAALAEL 405 (429)
Q Consensus 334 ~~~l~~~~~~~~p~l~~-~~~~~~~~~g~r~-~t~d~~p~---ig~-~-~~~~~~~~~~-G~~~~G~~~a~~~a~~la~~ 405 (429)
.+.+++.+.++++.-.. .......|....| ++++.... ++. + ...+|+|+++ .+.+.|+.-|...|+.+|+.
T Consensus 381 ~~~~~~~L~~~~g~~~~p~~~~v~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g~g~~~a~~sG~~aA~~ 460 (475)
T 3lov_A 381 QQAVLQDLEKICGRTLEPKQVIISRLMDGLPAYTVGHADRIQRVREEVLAQYPGIYLAGLAYDGVGLPDCVASAKTMIES 460 (475)
T ss_dssp HHHHHHHHHHHHSSCCCCSEEEEEEEEEEEECCCTTHHHHHHHHHHHHHHHSTTEEECSTTTSCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCeEEEEEEcccCCCCCCCChHHHHHHHHHHHHhhCCCEEEEccCCCCCCHHHHHHHHHHHHHH
Confidence 78889999998864222 0123456655444 34432111 111 1 1137899887 57778999999999999999
Q ss_pred Hhc
Q 014198 406 VMD 408 (429)
Q Consensus 406 i~~ 408 (429)
|+.
T Consensus 461 i~~ 463 (475)
T 3lov_A 461 IEL 463 (475)
T ss_dssp HHH
T ss_pred HHH
Confidence 854
No 84
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.30 E-value=2e-11 Score=113.72 Aligned_cols=131 Identities=23% Similarity=0.265 Sum_probs=85.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDN 132 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 132 (429)
++||+|||||++|+++|+.|+++|++|+|||+.+..++..... +. .......
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~-------~~---------------------~~~~~~~ 54 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHA-------WH---------------------SLHLFSP 54 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGS-------CT---------------------TCBCSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCC-------CC---------------------CcEecCc
Confidence 4799999999999999999999999999999987322221100 00 0000000
Q ss_pred cCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-
Q 014198 133 YGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK- 211 (429)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~- 211 (429)
. ......... .............+.+.+.+.+ ++.|+++++++
T Consensus 55 ~--------------------------~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~ 98 (357)
T 4a9w_A 55 A--------------------------GWSSIPGWP---------MPASQGPYPARAEVLAYLAQYE-QKYALPVLRPIR 98 (357)
T ss_dssp G--------------------------GGSCCSSSC---------CCCCSSSSCBHHHHHHHHHHHH-HHTTCCEECSCC
T ss_pred h--------------------------hhhhCCCCC---------CCCCccCCCCHHHHHHHHHHHH-HHcCCEEEcCCE
Confidence 0 000000000 0001112234567888888888 88899999999
Q ss_pred EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchH
Q 014198 212 VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGK 249 (429)
Q Consensus 212 v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~ 249 (429)
|+++..+ ++.+..|.+.++ ++.+|.||+|+|.++..
T Consensus 99 v~~i~~~-~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~ 134 (357)
T 4a9w_A 99 VQRVSHF-GERLRVVARDGR-QWLARAVISATGTWGEA 134 (357)
T ss_dssp EEEEEEE-TTEEEEEETTSC-EEEEEEEEECCCSGGGB
T ss_pred EEEEEEC-CCcEEEEEeCCC-EEEeCEEEECCCCCCCC
Confidence 9999987 554432777665 89999999999987754
No 85
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.29 E-value=1.6e-11 Score=119.46 Aligned_cols=138 Identities=22% Similarity=0.154 Sum_probs=89.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGP 130 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 130 (429)
...+||+|||||++|+++|+.|++.|++|+|||+.+..++.. .+. +...+.+.+. .++..
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~-----~~~-----------~~~~~~~~l~----~~g~~ 149 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHN-----VLH-----------LWPFTIHDLR----ALGAK 149 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCC-----EEE-----------CCHHHHHHHH----TTTHH
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCC-----ccc-----------CChhHHHHHH----HcCCc
Confidence 346899999999999999999999999999999987322110 000 0111112221 11110
Q ss_pred CCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEc
Q 014198 131 DNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIG 210 (429)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~ 210 (429)
. .. . .+. ......++...+.+.|.+.+ ++.|++++++
T Consensus 150 ~-----~~---------------------~----~~~------------~~~~~~~~~~~l~~~L~~~~-~~~gv~v~~~ 186 (497)
T 2bry_A 150 K-----FY---------------------G----RFC------------TGTLDHISIRQLQLLLLKVA-LLLGVEIHWG 186 (497)
T ss_dssp H-----HC---------------------T----TTT------------CTTCCEEEHHHHHHHHHHHH-HHTTCEEEES
T ss_pred c-----cc---------------------c----ccc------------ccccccCCHHHHHHHHHHHH-HhCCCEEEeC
Confidence 0 00 0 000 01113466788888999999 7789999999
Q ss_pred e-EEEEEEcc-CCcEEEEEEe---CC--eEEEcCEEEEcCCCCchHHH
Q 014198 211 K-VERVGVGE-GGRVESVMIE---GG--RVVESDAVVLALGPWSGKFE 251 (429)
Q Consensus 211 ~-v~~i~~~~-~g~v~~v~~~---~g--~~i~ad~vV~a~G~~s~~~~ 251 (429)
+ |+++..++ ++..+.|.+. +| .+++||.||+|+|.++....
T Consensus 187 ~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r~ 234 (497)
T 2bry_A 187 VKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPEG 234 (497)
T ss_dssp CEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCTT
T ss_pred CEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCccccc
Confidence 9 99998641 2333456663 44 47899999999999886543
No 86
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.28 E-value=3.6e-11 Score=100.52 Aligned_cols=115 Identities=28% Similarity=0.311 Sum_probs=82.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC-CccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS-VACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDN 132 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~-~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 132 (429)
+||+|||||++|+++|..|++.|.+|+|+|+.+ ....+. .+..
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~---------------------------------~~~~--- 45 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVS---------------------------------RVPN--- 45 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCS---------------------------------CCCC---
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCch---------------------------------hhhc---
Confidence 689999999999999999999999999999986 100000 0000
Q ss_pred cCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEceE
Q 014198 133 YGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGKV 212 (429)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~v 212 (429)
..+. + ..+.+..+.+.+.+.+ ++.|++++.+.|
T Consensus 46 -------------------------------------------~~~~-~--~~~~~~~~~~~l~~~~-~~~gv~v~~~~v 78 (180)
T 2ywl_A 46 -------------------------------------------YPGL-L--DEPSGEELLRRLEAHA-RRYGAEVRPGVV 78 (180)
T ss_dssp -------------------------------------------STTC-T--TCCCHHHHHHHHHHHH-HHTTCEEEECCC
T ss_pred -------------------------------------------cCCC-c--CCCCHHHHHHHHHHHH-HHcCCEEEeCEE
Confidence 0000 0 0134567777888888 888999999888
Q ss_pred EEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHHhhh
Q 014198 213 ERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFELLA 254 (429)
Q Consensus 213 ~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~~~~ 254 (429)
++++.+ ++. +.+++.++ ++++|.||+|+|.++.....++
T Consensus 79 ~~i~~~-~~~-~~v~~~~g-~i~ad~vI~A~G~~~~~~~~~g 117 (180)
T 2ywl_A 79 KGVRDM-GGV-FEVETEEG-VEKAERLLLCTHKDPTLPSLLG 117 (180)
T ss_dssp CEEEEC-SSS-EEEECSSC-EEEEEEEEECCTTCCHHHHHHT
T ss_pred EEEEEc-CCE-EEEEECCC-EEEECEEEECCCCCCCccccCC
Confidence 888876 333 35777777 8999999999999985333444
No 87
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.28 E-value=3.6e-12 Score=123.18 Aligned_cols=131 Identities=24% Similarity=0.265 Sum_probs=91.4
Q ss_pred ccccCCCCCCCccCcceE--EEeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcEE
Q 014198 3 ATLLAPSSAPTYLPGLRL--TLIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAVT 80 (429)
Q Consensus 3 ~~~~a~g~~p~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~ 80 (429)
.+|||||++|..|||.+. .+++..+...... ....+|+|||||.+|+++|..|++.|.+|+
T Consensus 134 ~lViATGs~p~~p~gi~~~~~v~~~~~~~~l~~-----------------~~~~~vvViGgG~~g~e~A~~l~~~g~~Vt 196 (464)
T 2eq6_A 134 SLILATGSEPLELKGFPFGEDVWDSTRALKVEE-----------------GLPKRLLVIGGGAVGLELGQVYRRLGAEVT 196 (464)
T ss_dssp EEEECCCEEECCBTTBCCSSSEECHHHHTCGGG-----------------CCCSEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred EEEEcCCCCCCCCCCCCCCCcEEcHHHHHhhhh-----------------hcCCEEEEECCCHHHHHHHHHHHHCCCeEE
Confidence 589999999988764321 1222222111000 024689999999999999999999999999
Q ss_pred EEcCCC-CccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCcccc
Q 014198 81 LIEKSS-VACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKA 159 (429)
Q Consensus 81 lie~~~-~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (429)
|+|+.+ +... +
T Consensus 197 lv~~~~~~l~~--------------------------------~------------------------------------ 208 (464)
T 2eq6_A 197 LIEYMPEILPQ--------------------------------G------------------------------------ 208 (464)
T ss_dssp EECSSSSSSTT--------------------------------S------------------------------------
T ss_pred EEEcCCccccc--------------------------------c------------------------------------
Confidence 999986 1100 0
Q ss_pred CCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEe-C--Ce--E
Q 014198 160 NSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIE-G--GR--V 233 (429)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~-~--g~--~ 233 (429)
...+.+.+.+.+ ++.|+++++++ |++++.+ ++.+ .+.+. + |+ +
T Consensus 209 ----------------------------~~~~~~~l~~~l-~~~gV~i~~~~~v~~i~~~-~~~~-~v~~~~~~~g~~~~ 257 (464)
T 2eq6_A 209 ----------------------------DPETAALLRRAL-EKEGIRVRTKTKAVGYEKK-KDGL-HVRLEPAEGGEGEE 257 (464)
T ss_dssp ----------------------------CHHHHHHHHHHH-HHTTCEEECSEEEEEEEEE-TTEE-EEEEEETTCCSCEE
T ss_pred ----------------------------CHHHHHHHHHHH-HhcCCEEEcCCEEEEEEEe-CCEE-EEEEeecCCCceeE
Confidence 012223566677 77899999999 9999876 4443 36655 5 65 8
Q ss_pred EEcCEEEEcCCCCchH
Q 014198 234 VESDAVVLALGPWSGK 249 (429)
Q Consensus 234 i~ad~vV~a~G~~s~~ 249 (429)
+.+|.||+|+|..++.
T Consensus 258 i~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 258 VVVDKVLVAVGRKPRT 273 (464)
T ss_dssp EEESEEEECSCEEESC
T ss_pred EEcCEEEECCCcccCC
Confidence 9999999999976554
No 88
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.27 E-value=1.8e-12 Score=124.02 Aligned_cols=138 Identities=20% Similarity=0.239 Sum_probs=95.9
Q ss_pred ccccCCCCCCCcc--CcceEE----EeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCC
Q 014198 3 ATLLAPSSAPTYL--PGLRLT----LIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKG 76 (429)
Q Consensus 3 ~~~~a~g~~p~~~--~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G 76 (429)
.+|||||++|..| ||.... ++..++..+...+.... ....+|+|||+|.+|+.+|..|++.|
T Consensus 105 ~lviAtG~~p~~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l------------~~~~~vvViGgG~~g~E~A~~l~~~G 172 (431)
T 1q1r_A 105 RLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQL------------IADNRLVVIGGGYIGLEVAATAIKAN 172 (431)
T ss_dssp EEEECCCEEECCCGGGTTHHHHSTTEEESSSHHHHHHHHHTC------------CTTCEEEEECCSHHHHHHHHHHHHTT
T ss_pred EEEEcCCCCccCCCCCCcccCCCceEEEECCHHHHHHHHHHh------------hcCCeEEEECCCHHHHHHHHHHHhCC
Confidence 5899999999876 454321 22222222111111000 22468999999999999999999999
Q ss_pred CcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCc
Q 014198 77 AAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPS 156 (429)
Q Consensus 77 ~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (429)
.+|+++++.+.. +.. .
T Consensus 173 ~~Vtlv~~~~~~-------------------------------l~~------~--------------------------- 188 (431)
T 1q1r_A 173 MHVTLLDTAARV-------------------------------LER------V--------------------------- 188 (431)
T ss_dssp CEEEEECSSSST-------------------------------TTT------T---------------------------
T ss_pred CEEEEEEeCCcc-------------------------------ccc------h---------------------------
Confidence 999999987610 000 0
Q ss_pred cccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEE--ccCCcEEEEEEeCCeE
Q 014198 157 NKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGV--GEGGRVESVMIEGGRV 233 (429)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~--~~~g~v~~v~~~~g~~ 233 (429)
.+..+.+.+.+.+ ++.|+++++++ |+++.. + ++++..|.+.+|.+
T Consensus 189 ------------------------------~~~~~~~~l~~~l-~~~GV~i~~~~~v~~i~~~~~-~~~v~~v~~~~G~~ 236 (431)
T 1q1r_A 189 ------------------------------TAPPVSAFYEHLH-REAGVDIRTGTQVCGFEMSTD-QQKVTAVLCEDGTR 236 (431)
T ss_dssp ------------------------------SCHHHHHHHHHHH-HHHTCEEECSCCEEEEEECTT-TCCEEEEEETTSCE
T ss_pred ------------------------------hhHHHHHHHHHHH-HhCCeEEEeCCEEEEEEeccC-CCcEEEEEeCCCCE
Confidence 0012233566667 77899999999 999987 4 56777788888889
Q ss_pred EEcCEEEEcCCCCch
Q 014198 234 VESDAVVLALGPWSG 248 (429)
Q Consensus 234 i~ad~vV~a~G~~s~ 248 (429)
+.+|.||+|+|...+
T Consensus 237 i~~D~Vv~a~G~~p~ 251 (431)
T 1q1r_A 237 LPADLVIAGIGLIPN 251 (431)
T ss_dssp EECSEEEECCCEEEC
T ss_pred EEcCEEEECCCCCcC
Confidence 999999999997665
No 89
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.26 E-value=2.4e-12 Score=124.29 Aligned_cols=130 Identities=25% Similarity=0.335 Sum_probs=92.1
Q ss_pred ccccCCCCCCCccCcceEE---EeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcE
Q 014198 3 ATLLAPSSAPTYLPGLRLT---LIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAV 79 (429)
Q Consensus 3 ~~~~a~g~~p~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V 79 (429)
.+|||||++|..||..... +++..+... .. ....+|+|||||.+|+++|..|++.|.+|
T Consensus 132 ~lviAtG~~p~~~~~~g~~~~~v~~~~~~~~---------------~~---~~~~~vvIiGgG~~g~e~A~~l~~~g~~V 193 (455)
T 2yqu_A 132 YILIATGSAPLIPPWAQVDYERVVTSTEALS---------------FP---EVPKRLIVVGGGVIGLELGVVWHRLGAEV 193 (455)
T ss_dssp EEEECCCEEECCCTTBCCCSSSEECHHHHTC---------------CS---SCCSEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred EEEECCCCCCCCCCCCCCCcCcEechHHhhc---------------cc---cCCCeEEEECCCHHHHHHHHHHHHcCCEE
Confidence 5899999999877533211 222222110 00 22468999999999999999999999999
Q ss_pred EEEcCCC-CccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccc
Q 014198 80 TLIEKSS-VACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNK 158 (429)
Q Consensus 80 ~lie~~~-~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (429)
+|+|+.+ +...
T Consensus 194 ~lv~~~~~~l~~-------------------------------------------------------------------- 205 (455)
T 2yqu_A 194 IVLEYMDRILPT-------------------------------------------------------------------- 205 (455)
T ss_dssp EEECSSSSSCTT--------------------------------------------------------------------
T ss_pred EEEecCCccccc--------------------------------------------------------------------
Confidence 9999986 1100
Q ss_pred cCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcC
Q 014198 159 ANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESD 237 (429)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad 237 (429)
....+.+.+.+.+ ++.|+++++++ |++++.+ ++.+ .+.+.++.++.+|
T Consensus 206 ----------------------------~~~~~~~~l~~~l-~~~Gv~i~~~~~V~~i~~~-~~~v-~v~~~~g~~i~~D 254 (455)
T 2yqu_A 206 ----------------------------MDLEVSRAAERVF-KKQGLTIRTGVRVTAVVPE-AKGA-RVELEGGEVLEAD 254 (455)
T ss_dssp ----------------------------SCHHHHHHHHHHH-HHHTCEEECSCCEEEEEEE-TTEE-EEEETTSCEEEES
T ss_pred ----------------------------cCHHHHHHHHHHH-HHCCCEEEECCEEEEEEEe-CCEE-EEEECCCeEEEcC
Confidence 0012333666677 77899999999 9999876 4433 4666678889999
Q ss_pred EEEEcCCCCchH
Q 014198 238 AVVLALGPWSGK 249 (429)
Q Consensus 238 ~vV~a~G~~s~~ 249 (429)
.||+|+|..++.
T Consensus 255 ~vv~A~G~~p~~ 266 (455)
T 2yqu_A 255 RVLVAVGRRPYT 266 (455)
T ss_dssp EEEECSCEEECC
T ss_pred EEEECcCCCcCC
Confidence 999999987654
No 90
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.26 E-value=3.1e-11 Score=112.84 Aligned_cols=118 Identities=20% Similarity=0.274 Sum_probs=84.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPD 131 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 131 (429)
..+||+|||||++|+++|+.|+++|++|+|||+.+..+|. +..+ ...
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~----------------------------~~~~---~~~-- 59 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQ----------------------------LAAL---YPE-- 59 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHH----------------------------HHHT---CTT--
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCc----------------------------cccc---CCC--
Confidence 4689999999999999999999999999999998722111 1000 000
Q ss_pred CcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce
Q 014198 132 NYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK 211 (429)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~ 211 (429)
. ... + .+....+++..+.+.+.+.+ .+.|++++.++
T Consensus 60 ~-~~~-------------------------------~-----------~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~ 95 (360)
T 3ab1_A 60 K-HIY-------------------------------D-----------VAGFPEVPAIDLVESLWAQA-ERYNPDVVLNE 95 (360)
T ss_dssp S-EEC-------------------------------C-----------STTCSSEEHHHHHHHHHHHH-HTTCCEEECSC
T ss_pred c-ccc-------------------------------c-----------CCCCCCCCHHHHHHHHHHHH-HHhCCEEEcCC
Confidence 0 000 0 00111256678888898888 78899999999
Q ss_pred -EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCc
Q 014198 212 -VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWS 247 (429)
Q Consensus 212 -v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s 247 (429)
|+++..++++. +.|.+.++..+.+|.||+|+|..+
T Consensus 96 ~v~~i~~~~~~~-~~v~~~~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 96 TVTKYTKLDDGT-FETRTNTGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp CEEEEEECTTSC-EEEEETTSCEEEEEEEEECCTTCS
T ss_pred EEEEEEECCCce-EEEEECCCcEEEeeEEEEccCCCc
Confidence 99999863333 457777777899999999999864
No 91
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.26 E-value=5.5e-12 Score=123.69 Aligned_cols=134 Identities=24% Similarity=0.386 Sum_probs=95.7
Q ss_pred ccccCCCCCCCcc--CcceEE-EeeccccccceeeeecCCCCCCCCCCCCCCCC-CcEEEECCCHHHHHHHHHHHHCCCc
Q 014198 3 ATLLAPSSAPTYL--PGLRLT-LIGSRKLSKTTTFINCSAAQASPPMDGQRHSK-KHVAVCGGGIIGVCTAYFLAKKGAA 78 (429)
Q Consensus 3 ~~~~a~g~~p~~~--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dvvIIGaGi~Gl~~A~~L~~~G~~ 78 (429)
.+|||||++|..| ||.... +++..+... .+. ... .+++|||+|.+|+.+|..|++.|.+
T Consensus 177 ~lViATGs~p~~p~i~G~~~~~v~~~~~~~~--~l~---------------~~~g~~vvViGgG~~g~E~A~~l~~~G~~ 239 (523)
T 1mo9_A 177 NLILAVGAGPGTLDVPGVNAKGVFDHATLVE--ELD---------------YEPGSTVVVVGGSKTAVEYGCFFNATGRR 239 (523)
T ss_dssp CEEECCCEECCCCCSTTTTSBTEEEHHHHHH--HCC---------------SCCCSEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred EEEECCCCCCCCCCCCCcccCcEeeHHHHHH--HHH---------------hcCCCeEEEECCCHHHHHHHHHHHHcCCe
Confidence 5899999999876 455332 333332210 000 122 6899999999999999999999999
Q ss_pred EEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccc
Q 014198 79 VTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNK 158 (429)
Q Consensus 79 V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (429)
|+++++.+. ++..
T Consensus 240 Vtlv~~~~~-------------------------------~l~~------------------------------------ 252 (523)
T 1mo9_A 240 TVMLVRTEP-------------------------------LKLI------------------------------------ 252 (523)
T ss_dssp EEEECSSCT-------------------------------TTTC------------------------------------
T ss_pred EEEEEecCc-------------------------------cccc------------------------------------
Confidence 999999861 0000
Q ss_pred cCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcE--EEEEEeCCe-EE
Q 014198 159 ANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRV--ESVMIEGGR-VV 234 (429)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v--~~v~~~~g~-~i 234 (429)
.+..+.+.+.+.+ ++.|+++++++ |+++..++++++ ..|++.+|. ++
T Consensus 253 ----------------------------~~~~~~~~l~~~l-~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i 303 (523)
T 1mo9_A 253 ----------------------------KDNETRAYVLDRM-KEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRI 303 (523)
T ss_dssp ----------------------------CSHHHHHHHHHHH-HHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEE
T ss_pred ----------------------------ccHHHHHHHHHHH-HhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEE
Confidence 0112334677777 78899999999 999987534543 346776776 89
Q ss_pred EcCEEEEcCCCCchH
Q 014198 235 ESDAVVLALGPWSGK 249 (429)
Q Consensus 235 ~ad~vV~a~G~~s~~ 249 (429)
.+|.||+|+|.+++.
T Consensus 304 ~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 304 ETDFVFLGLGEQPRS 318 (523)
T ss_dssp ECSCEEECCCCEECC
T ss_pred EcCEEEECcCCccCC
Confidence 999999999988765
No 92
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.26 E-value=2.3e-12 Score=124.31 Aligned_cols=138 Identities=19% Similarity=0.304 Sum_probs=95.4
Q ss_pred ccccCCCCCCCcc--CcceEE-EeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcE
Q 014198 3 ATLLAPSSAPTYL--PGLRLT-LIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAV 79 (429)
Q Consensus 3 ~~~~a~g~~p~~~--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V 79 (429)
.+|||||++|..| ||.... ++..+++.+...+.... ....+++|||+|.+|+.+|..|++.|.+|
T Consensus 108 ~lviAtGs~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~------------~~~~~vvViGgG~~g~E~A~~l~~~g~~V 175 (452)
T 2cdu_A 108 KLIMTTGSKPTVPPIPGIDSSRVYLCKNYNDAKKLFEEA------------PKAKTITIIGSGYIGAELAEAYSNQNYNV 175 (452)
T ss_dssp EEEECCCEEECCCCCTTTTSTTEEECSSHHHHHHHHHHG------------GGCSEEEEECCSHHHHHHHHHHHTTTCEE
T ss_pred EEEEccCCCcCCCCCCCCCCCCEEEeCcHHHHHHHHHHh------------ccCCeEEEECcCHHHHHHHHHHHhcCCEE
Confidence 5899999999876 454322 33333322222211111 23468999999999999999999999999
Q ss_pred EEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCcccc
Q 014198 80 TLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKA 159 (429)
Q Consensus 80 ~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (429)
+++++.+.. +.. .
T Consensus 176 tlv~~~~~~-------------------------------l~~------~------------------------------ 188 (452)
T 2cdu_A 176 NLIDGHERV-------------------------------LYK------Y------------------------------ 188 (452)
T ss_dssp EEEESSSST-------------------------------TTT------T------------------------------
T ss_pred EEEEcCCch-------------------------------hhh------h------------------------------
Confidence 999997610 000 0
Q ss_pred CCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCE
Q 014198 160 NSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDA 238 (429)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~ 238 (429)
....+.+.+.+.+ ++.|+++++++ |+++..+ ++++..+.+ +|.++.+|.
T Consensus 189 ---------------------------~~~~~~~~l~~~l-~~~Gv~i~~~~~v~~i~~~-~~~v~~v~~-~g~~i~~D~ 238 (452)
T 2cdu_A 189 ---------------------------FDKEFTDILAKDY-EAHGVNLVLGSKVAAFEEV-DDEIITKTL-DGKEIKSDI 238 (452)
T ss_dssp ---------------------------SCHHHHHHHHHHH-HHTTCEEEESSCEEEEEEE-TTEEEEEET-TSCEEEESE
T ss_pred ---------------------------hhhhHHHHHHHHH-HHCCCEEEcCCeeEEEEcC-CCeEEEEEe-CCCEEECCE
Confidence 0012333667777 78899999999 9999875 566655555 678899999
Q ss_pred EEEcCCCCchH
Q 014198 239 VVLALGPWSGK 249 (429)
Q Consensus 239 vV~a~G~~s~~ 249 (429)
||+|+|...+.
T Consensus 239 vv~a~G~~p~~ 249 (452)
T 2cdu_A 239 AILCIGFRPNT 249 (452)
T ss_dssp EEECCCEEECC
T ss_pred EEECcCCCCCH
Confidence 99999976653
No 93
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.25 E-value=2.1e-12 Score=124.43 Aligned_cols=138 Identities=26% Similarity=0.344 Sum_probs=94.3
Q ss_pred ccccCCCCCCCcc--CcceEE-EeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcE
Q 014198 3 ATLLAPSSAPTYL--PGLRLT-LIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAV 79 (429)
Q Consensus 3 ~~~~a~g~~p~~~--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V 79 (429)
.+|||||++|..| ||.... +++.++..+...+.... . .....+++|||+|.+|+++|..|++.|.+|
T Consensus 106 ~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~--------~--~~~~~~vvIiG~G~~g~e~A~~l~~~g~~V 175 (447)
T 1nhp_A 106 KLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQKT--------V--DPEVNNVVVIGSGYIGIEAAEAFAKAGKKV 175 (447)
T ss_dssp EEEECCCEEECCCCSTTTTSBSEECCCHHHHHHHHHHHH--------T--CTTCCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred EEEEcCCCCcCCCCCCCCCCCCeEEECCHHHHHHHHHHh--------h--hcCCCeEEEECCCHHHHHHHHHHHHCCCeE
Confidence 5899999999876 565432 44433332211111000 0 013579999999999999999999999999
Q ss_pred EEEcCCC-CccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccc
Q 014198 80 TLIEKSS-VACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNK 158 (429)
Q Consensus 80 ~lie~~~-~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (429)
+|+|+.+ +... .
T Consensus 176 tlv~~~~~~l~~--------------------------------------~----------------------------- 188 (447)
T 1nhp_A 176 TVIDILDRPLGV--------------------------------------Y----------------------------- 188 (447)
T ss_dssp EEEESSSSTTTT--------------------------------------T-----------------------------
T ss_pred EEEecCcccccc--------------------------------------c-----------------------------
Confidence 9999986 1100 0
Q ss_pred cCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcC
Q 014198 159 ANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESD 237 (429)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad 237 (429)
....+.+.+.+.+ ++.|+++++++ |+++..+ +++..+.+ ++.++.+|
T Consensus 189 ----------------------------~~~~~~~~l~~~l-~~~gv~i~~~~~v~~i~~~--~~v~~v~~-~~~~i~~d 236 (447)
T 1nhp_A 189 ----------------------------LDKEFTDVLTEEM-EANNITIATGETVERYEGD--GRVQKVVT-DKNAYDAD 236 (447)
T ss_dssp ----------------------------CCHHHHHHHHHHH-HTTTEEEEESCCEEEEECS--SBCCEEEE-SSCEEECS
T ss_pred ----------------------------CCHHHHHHHHHHH-HhCCCEEEcCCEEEEEEcc--CcEEEEEE-CCCEEECC
Confidence 0012333677777 78899999999 9999854 44444555 56789999
Q ss_pred EEEEcCCCCchH
Q 014198 238 AVVLALGPWSGK 249 (429)
Q Consensus 238 ~vV~a~G~~s~~ 249 (429)
.||+|+|..++.
T Consensus 237 ~vi~a~G~~p~~ 248 (447)
T 1nhp_A 237 LVVVAVGVRPNT 248 (447)
T ss_dssp EEEECSCEEESC
T ss_pred EEEECcCCCCCh
Confidence 999999976653
No 94
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.25 E-value=4.2e-11 Score=117.41 Aligned_cols=135 Identities=18% Similarity=0.120 Sum_probs=89.2
Q ss_pred CCcEEEECCCHHHHHHHHHHH-HCCCcEEEEcCCCCcccccccc--CCe-eee-ccCCCCcchhhhHHHHHHHHHHHHHh
Q 014198 53 KKHVAVCGGGIIGVCTAYFLA-KKGAAVTLIEKSSVACAASGKA--GGF-LAL-DWCDGGPLSSLARASFNLHRSLAEEL 127 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~-~~G~~V~lie~~~~~~~~s~~~--~g~-~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~ 127 (429)
.+||+|||||++|+++|+.|+ +.|++|+|||+....+|....+ .|. +.. ....... +-..+....
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~----------~~~~~~~~~ 77 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFS----------FDRDLLQES 77 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCC----------SCHHHHHHC
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeec----------cccccccCC
Confidence 579999999999999999999 9999999999987322221110 000 000 0000000 000000000
Q ss_pred CCCCCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCc--
Q 014198 128 NGPDNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGL-- 205 (429)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv-- 205 (429)
. ......+..++.+.+.+.+ ++.|+
T Consensus 78 ~----------------------------------------------------~~~~~~~~~ei~~~l~~~~-~~~g~~~ 104 (540)
T 3gwf_A 78 T----------------------------------------------------WKTTYITQPEILEYLEDVV-DRFDLRR 104 (540)
T ss_dssp C----------------------------------------------------CSBSEEEHHHHHHHHHHHH-HHTTCGG
T ss_pred C----------------------------------------------------CcccCCCHHHHHHHHHHHH-HHcCCcc
Confidence 0 1123456677888888888 78888
Q ss_pred EEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHH
Q 014198 206 EVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKF 250 (429)
Q Consensus 206 ~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~ 250 (429)
++++++ |+++..++++..+.|.+.+|.++.+|.||+|+|.++...
T Consensus 105 ~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~ 150 (540)
T 3gwf_A 105 HFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAIN 150 (540)
T ss_dssp GEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBC
T ss_pred eeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCC
Confidence 899999 999998745455678888888899999999999876543
No 95
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.24 E-value=6.9e-11 Score=108.54 Aligned_cols=112 Identities=17% Similarity=0.211 Sum_probs=81.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPD 131 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 131 (429)
+.+||+|||||++|+++|+.|+++|++|+|||+. +++... ....+..
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~gg~~~--~~~~~~~------------------------------ 60 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET-PGGQLT--EAGIVDD------------------------------ 60 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-TTGGGG--GCCEECC------------------------------
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc-CCCeec--ccccccc------------------------------
Confidence 3589999999999999999999999999999998 322111 0000000
Q ss_pred CcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce
Q 014198 132 NYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK 211 (429)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~ 211 (429)
.+....+.+..+...+.+.+ ++.|++++. +
T Consensus 61 ------------------------------------------------~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~-~ 90 (323)
T 3f8d_A 61 ------------------------------------------------YLGLIEIQASDMIKVFNKHI-EKYEVPVLL-D 90 (323)
T ss_dssp ------------------------------------------------STTSTTEEHHHHHHHHHHHH-HTTTCCEEE-S
T ss_pred ------------------------------------------------cCCCCCCCHHHHHHHHHHHH-HHcCCEEEE-E
Confidence 00011145677788888888 888999999 7
Q ss_pred -EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCch
Q 014198 212 -VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSG 248 (429)
Q Consensus 212 -v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~ 248 (429)
|+++..+ ++. +.+.+.++.++.+|.||+|+|....
T Consensus 91 ~v~~i~~~-~~~-~~v~~~~g~~~~~d~lvlAtG~~~~ 126 (323)
T 3f8d_A 91 IVEKIENR-GDE-FVVKTKRKGEFKADSVILGIGVKRR 126 (323)
T ss_dssp CEEEEEEC---C-EEEEESSSCEEEEEEEEECCCCEEC
T ss_pred EEEEEEec-CCE-EEEEECCCCEEEcCEEEECcCCCCc
Confidence 9999876 444 3577777789999999999998743
No 96
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.23 E-value=4.8e-12 Score=123.51 Aligned_cols=129 Identities=17% Similarity=0.149 Sum_probs=93.4
Q ss_pred ccccCCCCCCCccCcceEE---EeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcE
Q 014198 3 ATLLAPSSAPTYLPGLRLT---LIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAV 79 (429)
Q Consensus 3 ~~~~a~g~~p~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V 79 (429)
.+||||||+|..||..... ++++.++.... ..+.+++|||||.+|++.|..+++.|.+|
T Consensus 188 ~iiIATGs~P~~P~~~~~~~~~~~ts~~~l~l~------------------~lP~~lvIIGgG~IGlE~A~~~~~lG~~V 249 (542)
T 4b1b_A 188 YILIATGCRPHIPDDVEGAKELSITSDDIFSLK------------------KDPGKTLVVGASYVALECSGFLNSLGYDV 249 (542)
T ss_dssp EEEECCCEEECCCSSSBTHHHHCBCHHHHTTCS------------------SCCCSEEEECCSHHHHHHHHHHHHHTCCE
T ss_pred eEEeccCCCCCCCCcccCCCccccCchhhhccc------------------cCCceEEEECCCHHHHHHHHHHHhcCCeE
Confidence 4799999999988643321 33333321111 33568999999999999999999999999
Q ss_pred EEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCcccc
Q 014198 80 TLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKA 159 (429)
Q Consensus 80 ~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (429)
+|+++..+.. .+.
T Consensus 250 Tii~~~~~L~--------------------------------~~D----------------------------------- 262 (542)
T 4b1b_A 250 TVAVRSIVLR--------------------------------GFD----------------------------------- 262 (542)
T ss_dssp EEEESSCSST--------------------------------TSC-----------------------------------
T ss_pred EEeccccccc--------------------------------ccc-----------------------------------
Confidence 9998865210 000
Q ss_pred CCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCE
Q 014198 160 NSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDA 238 (429)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~ 238 (429)
.++.+.+.+.+ ++.|++++.++ ++++... ++.+ .|.+.++..+.+|.
T Consensus 263 -----------------------------~ei~~~l~~~l-~~~gi~~~~~~~v~~~~~~-~~~~-~v~~~~~~~~~~D~ 310 (542)
T 4b1b_A 263 -----------------------------QQCAVKVKLYM-EEQGVMFKNGILPKKLTKM-DDKI-LVEFSDKTSELYDT 310 (542)
T ss_dssp -----------------------------HHHHHHHHHHH-HHTTCEEEETCCEEEEEEE-TTEE-EEEETTSCEEEESE
T ss_pred -----------------------------hhHHHHHHHHH-HhhcceeecceEEEEEEec-CCeE-EEEEcCCCeEEEEE
Confidence 12333667777 88899999999 9999987 5544 47777888899999
Q ss_pred EEEcCCCCch
Q 014198 239 VVLALGPWSG 248 (429)
Q Consensus 239 vV~a~G~~s~ 248 (429)
|++|+|-..+
T Consensus 311 vLvAvGR~Pn 320 (542)
T 4b1b_A 311 VLYAIGRKGD 320 (542)
T ss_dssp EEECSCEEES
T ss_pred EEEcccccCC
Confidence 9999995443
No 97
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.23 E-value=6.6e-11 Score=109.38 Aligned_cols=117 Identities=17% Similarity=0.301 Sum_probs=83.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPD 131 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 131 (429)
..+||+|||||++|+++|+.|+++|++|+|||+....+|. +... ...
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~----------------------------~~~~---~~~-- 50 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQ----------------------------LTAL---YPE-- 50 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHH----------------------------HHHT---CTT--
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCe----------------------------eecc---CCC--
Confidence 3589999999999999999999999999999998722110 1000 000
Q ss_pred CcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce
Q 014198 132 NYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK 211 (429)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~ 211 (429)
.. +. + .+....+.+..+.+.+.+.+ .+.+++++.++
T Consensus 51 ~~-~~-------------------------------~-----------~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~ 86 (335)
T 2zbw_A 51 KY-IY-------------------------------D-----------VAGFPKVYAKDLVKGLVEQV-APFNPVYSLGE 86 (335)
T ss_dssp SE-EC-------------------------------C-----------STTCSSEEHHHHHHHHHHHH-GGGCCEEEESC
T ss_pred ce-ee-------------------------------c-----------cCCCCCCCHHHHHHHHHHHH-HHcCCEEEeCC
Confidence 00 00 0 00111246677888888888 78899999999
Q ss_pred -EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCc
Q 014198 212 -VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWS 247 (429)
Q Consensus 212 -v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s 247 (429)
|+++..+ ++. +.|.+.++.++.+|.||+|+|..+
T Consensus 87 ~v~~i~~~-~~~-~~v~~~~g~~~~~~~lv~AtG~~~ 121 (335)
T 2zbw_A 87 RAETLERE-GDL-FKVTTSQGNAYTAKAVIIAAGVGA 121 (335)
T ss_dssp CEEEEEEE-TTE-EEEEETTSCEEEEEEEEECCTTSE
T ss_pred EEEEEEEC-CCE-EEEEECCCCEEEeCEEEECCCCCC
Confidence 9999876 443 457776777899999999999864
No 98
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.23 E-value=4.1e-12 Score=122.31 Aligned_cols=130 Identities=25% Similarity=0.304 Sum_probs=92.3
Q ss_pred ccccCCCCCCCcc--CcceEEEeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcEE
Q 014198 3 ATLLAPSSAPTYL--PGLRLTLIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAVT 80 (429)
Q Consensus 3 ~~~~a~g~~p~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~ 80 (429)
.+|||||++|..| ||... +++..+.. . .. ....+++|||||.+|+++|..|++.|.+|+
T Consensus 134 ~lviAtGs~p~~p~i~g~~~-~~~~~~~~---~---~~------------~~~~~vvViGgG~~g~e~A~~l~~~g~~Vt 194 (450)
T 1ges_A 134 HILIATGGRPSHPDIPGVEY-GIDSDGFF---A---LP------------ALPERVAVVGAGYIGVELGGVINGLGAKTH 194 (450)
T ss_dssp EEEECCCEEECCCCSTTGGG-SBCHHHHH---H---CS------------SCCSEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred EEEECCCCCCCCCCCCCccc-eecHHHhh---h---hh------------hcCCeEEEECCCHHHHHHHHHHHhcCCEEE
Confidence 5899999999876 45421 22221110 0 00 224689999999999999999999999999
Q ss_pred EEcCCC-CccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCcccc
Q 014198 81 LIEKSS-VACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKA 159 (429)
Q Consensus 81 lie~~~-~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (429)
|+|+.+ +.. .+
T Consensus 195 lv~~~~~~l~--------------------------------~~------------------------------------ 206 (450)
T 1ges_A 195 LFEMFDAPLP--------------------------------SF------------------------------------ 206 (450)
T ss_dssp EECSSSSSST--------------------------------TS------------------------------------
T ss_pred EEEeCCchhh--------------------------------hh------------------------------------
Confidence 999986 110 00
Q ss_pred CCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCE
Q 014198 160 NSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDA 238 (429)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~ 238 (429)
...+.+.+.+.+ ++.|+++++++ |++++.++++. ..|.+.+|.++.+|.
T Consensus 207 ----------------------------~~~~~~~l~~~l-~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~i~~D~ 256 (450)
T 1ges_A 207 ----------------------------DPMISETLVEVM-NAEGPQLHTNAIPKAVVKNTDGS-LTLELEDGRSETVDC 256 (450)
T ss_dssp ----------------------------CHHHHHHHHHHH-HHHSCEEECSCCEEEEEECTTSC-EEEEETTSCEEEESE
T ss_pred ----------------------------hHHHHHHHHHHH-HHCCCEEEeCCEEEEEEEeCCcE-EEEEECCCcEEEcCE
Confidence 012233666777 77899999999 99998763333 357777888899999
Q ss_pred EEEcCCCCchH
Q 014198 239 VVLALGPWSGK 249 (429)
Q Consensus 239 vV~a~G~~s~~ 249 (429)
||+|+|..++.
T Consensus 257 vv~a~G~~p~~ 267 (450)
T 1ges_A 257 LIWAIGREPAN 267 (450)
T ss_dssp EEECSCEEESC
T ss_pred EEECCCCCcCC
Confidence 99999976654
No 99
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.23 E-value=1.4e-11 Score=120.25 Aligned_cols=129 Identities=18% Similarity=0.308 Sum_probs=92.5
Q ss_pred ccccCCCCCCCcc--CcceEEEeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcEE
Q 014198 3 ATLLAPSSAPTYL--PGLRLTLIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAVT 80 (429)
Q Consensus 3 ~~~~a~g~~p~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~ 80 (429)
.+|||||++|..| ||... +++..+... . + . ..+|+|||+|.+|+.+|..|++.|.+|+
T Consensus 144 ~lViAtGs~p~~p~i~G~~~-~~~~~~~~~---------------~--~-~-~~~vvViGgG~ig~E~A~~l~~~g~~Vt 203 (500)
T 1onf_A 144 NILIAVGNKPVFPPVKGIEN-TISSDEFFN---------------I--K-E-SKKIGIVGSGYIAVELINVIKRLGIDSY 203 (500)
T ss_dssp SEEECCCCCBCCCSCTTGGG-CEEHHHHTT---------------C--C-C-CSEEEEECCSHHHHHHHHHHHTTTCEEE
T ss_pred EEEECCCCCCCCCCCCCCCc-ccCHHHHhc---------------c--C-C-CCeEEEECChHHHHHHHHHHHHcCCeEE
Confidence 5899999999876 55431 222221100 0 0 1 4589999999999999999999999999
Q ss_pred EEcCCC-CccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCcccc
Q 014198 81 LIEKSS-VACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKA 159 (429)
Q Consensus 81 lie~~~-~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (429)
++++.+ +. ..+
T Consensus 204 lv~~~~~~l--------------------------------~~~------------------------------------ 215 (500)
T 1onf_A 204 IFARGNRIL--------------------------------RKF------------------------------------ 215 (500)
T ss_dssp EECSSSSSC--------------------------------TTS------------------------------------
T ss_pred EEecCCccC--------------------------------ccc------------------------------------
Confidence 999976 11 000
Q ss_pred CCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeE-EEcC
Q 014198 160 NSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRV-VESD 237 (429)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~-i~ad 237 (429)
...+.+.+.+.+ ++.|+++++++ |+++..++++. ..|.+.+|.+ +.+|
T Consensus 216 ----------------------------d~~~~~~l~~~l-~~~gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~D 265 (500)
T 1onf_A 216 ----------------------------DESVINVLENDM-KKNNINIVTFADVVEIKKVSDKN-LSIHLSDGRIYEHFD 265 (500)
T ss_dssp ----------------------------CHHHHHHHHHHH-HHTTCEEECSCCEEEEEESSTTC-EEEEETTSCEEEEES
T ss_pred ----------------------------chhhHHHHHHHH-HhCCCEEEECCEEEEEEEcCCce-EEEEECCCcEEEECC
Confidence 012223666777 78899999999 99998763343 3577777877 9999
Q ss_pred EEEEcCCCCchH
Q 014198 238 AVVLALGPWSGK 249 (429)
Q Consensus 238 ~vV~a~G~~s~~ 249 (429)
.||+|+|...+.
T Consensus 266 ~vi~a~G~~p~~ 277 (500)
T 1onf_A 266 HVIYCVGRSPDT 277 (500)
T ss_dssp EEEECCCBCCTT
T ss_pred EEEECCCCCcCC
Confidence 999999977664
No 100
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.23 E-value=5.1e-12 Score=122.76 Aligned_cols=132 Identities=20% Similarity=0.346 Sum_probs=90.9
Q ss_pred ccccCCCCCCCccCcceEE---EeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcE
Q 014198 3 ATLLAPSSAPTYLPGLRLT---LIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAV 79 (429)
Q Consensus 3 ~~~~a~g~~p~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V 79 (429)
.+|||||++|..+||.... +.+..+... .. ....+++|||||.+|+.+|..|++.|.+|
T Consensus 148 ~lViAtGs~p~~~~g~~~~~~~v~~~~~~~~---------------~~---~~~~~vvViGgG~~g~e~A~~l~~~g~~V 209 (478)
T 1v59_A 148 NIIVATGSEVTPFPGIEIDEEKIVSSTGALS---------------LK---EIPKRLTIIGGGIIGLEMGSVYSRLGSKV 209 (478)
T ss_dssp EEEECCCEEECCCTTCCCCSSSEECHHHHTT---------------CS---SCCSEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred EEEECcCCCCCCCCCCCCCCceEEcHHHHHh---------------hh---ccCceEEEECCCHHHHHHHHHHHHcCCEE
Confidence 5899999999767775431 111111100 00 12468999999999999999999999999
Q ss_pred EEEcCCC-CccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccc
Q 014198 80 TLIEKSS-VACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNK 158 (429)
Q Consensus 80 ~lie~~~-~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (429)
+|+|+.+ +... +
T Consensus 210 tlv~~~~~~l~~--------------------------------~----------------------------------- 222 (478)
T 1v59_A 210 TVVEFQPQIGAS--------------------------------M----------------------------------- 222 (478)
T ss_dssp EEECSSSSSSSS--------------------------------S-----------------------------------
T ss_pred EEEEeCCccccc--------------------------------c-----------------------------------
Confidence 9999986 1100 0
Q ss_pred cCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEe-----CCe
Q 014198 159 ANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIE-----GGR 232 (429)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~-----~g~ 232 (429)
...+.+.+.+.+ ++.|+++++++ |+++..++++....+.+. ++.
T Consensus 223 -----------------------------~~~~~~~l~~~l-~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~ 272 (478)
T 1v59_A 223 -----------------------------DGEVAKATQKFL-KKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQE 272 (478)
T ss_dssp -----------------------------CHHHHHHHHHHH-HHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEE
T ss_pred -----------------------------CHHHHHHHHHHH-HHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCce
Confidence 012233666777 78899999999 999986212233446654 356
Q ss_pred EEEcCEEEEcCCCCchH
Q 014198 233 VVESDAVVLALGPWSGK 249 (429)
Q Consensus 233 ~i~ad~vV~a~G~~s~~ 249 (429)
++.+|.||+|+|..++.
T Consensus 273 ~~~~D~vv~a~G~~p~~ 289 (478)
T 1v59_A 273 NLEAEVLLVAVGRRPYI 289 (478)
T ss_dssp EEEESEEEECSCEEECC
T ss_pred EEECCEEEECCCCCcCC
Confidence 79999999999976553
No 101
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.22 E-value=7.3e-12 Score=121.90 Aligned_cols=131 Identities=24% Similarity=0.372 Sum_probs=92.9
Q ss_pred ccccCCCCCCCcc--CcceEEEeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHC---CC
Q 014198 3 ATLLAPSSAPTYL--PGLRLTLIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKK---GA 77 (429)
Q Consensus 3 ~~~~a~g~~p~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~---G~ 77 (429)
.+|||||++|..| ||... +++..+.... . ....+++|||+|.+|+.+|..|++. |.
T Consensus 158 ~lViATGs~p~~p~i~G~~~-~~~~~~~~~~---------------~---~~~~~vvViGgG~ig~E~A~~l~~~~~~g~ 218 (495)
T 2wpf_A 158 HILLATGSWPQMPAIPGIEH-CISSNEAFYL---------------P---EPPRRVLTVGGGFISVEFAGIFNAYKPPGG 218 (495)
T ss_dssp EEEECCCEEECCCCCTTGGG-CEEHHHHTTC---------------S---SCCSEEEEECSSHHHHHHHHHHHHHCCTTC
T ss_pred EEEEeCCCCcCCCCCCCccc-cccHHHHHhh---------------h---hcCCeEEEECCCHHHHHHHHHHHhhCCCCC
Confidence 5899999999876 45421 2222221110 0 2246899999999999999999999 99
Q ss_pred cEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCcc
Q 014198 78 AVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSN 157 (429)
Q Consensus 78 ~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (429)
+|+|+++.+.. +..+
T Consensus 219 ~Vtlv~~~~~~-------------------------------l~~~---------------------------------- 233 (495)
T 2wpf_A 219 KVTLCYRNNLI-------------------------------LRGF---------------------------------- 233 (495)
T ss_dssp EEEEEESSSSS-------------------------------CTTS----------------------------------
T ss_pred eEEEEEcCCcc-------------------------------cccc----------------------------------
Confidence 99999998610 0000
Q ss_pred ccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEc
Q 014198 158 KANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVES 236 (429)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~a 236 (429)
...+.+.+.+.+ ++.|+++++++ |+++..+ ++....|++.+|.++.+
T Consensus 234 ------------------------------d~~~~~~l~~~l-~~~GV~i~~~~~v~~i~~~-~~~~~~v~~~~G~~i~~ 281 (495)
T 2wpf_A 234 ------------------------------DETIREEVTKQL-TANGIEIMTNENPAKVSLN-TDGSKHVTFESGKTLDV 281 (495)
T ss_dssp ------------------------------CHHHHHHHHHHH-HHTTCEEEESCCEEEEEEC-TTSCEEEEETTSCEEEE
T ss_pred ------------------------------CHHHHHHHHHHH-HhCCCEEEeCCEEEEEEEc-CCceEEEEECCCcEEEc
Confidence 012233667777 78899999999 9999876 33334577778888999
Q ss_pred CEEEEcCCCCchH
Q 014198 237 DAVVLALGPWSGK 249 (429)
Q Consensus 237 d~vV~a~G~~s~~ 249 (429)
|.||+|+|...+.
T Consensus 282 D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 282 DVVMMAIGRIPRT 294 (495)
T ss_dssp SEEEECSCEEECC
T ss_pred CEEEECCCCcccc
Confidence 9999999976554
No 102
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.22 E-value=8.7e-11 Score=115.40 Aligned_cols=137 Identities=21% Similarity=0.193 Sum_probs=87.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccC--CeeeeccCCCCcchhhhHHHHHHHHHHHHHhCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAG--GFLALDWCDGGPLSSLARASFNLHRSLAEELNG 129 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~--g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 129 (429)
..+||+|||||++|+++|+.|++.|++|+|||+....+|....+. |.... . +...... .+-.++.....
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~d-v--~s~~y~~-----~f~~~~~~~~~- 90 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCD-V--ESIDYSY-----SFSPELEQEWN- 90 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCS-S--CTTTSSC-----CSCHHHHHHCC-
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeC-C--Cchhccc-----ccccccccCCC-
Confidence 468999999999999999999999999999999872222211000 00000 0 0000000 00000000000
Q ss_pred CCCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCc--EE
Q 014198 130 PDNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGL--EV 207 (429)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv--~v 207 (429)
......+..++...+.+.+ ++.|+ ++
T Consensus 91 ---------------------------------------------------~~~~~~~~~ei~~yl~~~~-~~~g~~~~i 118 (549)
T 4ap3_A 91 ---------------------------------------------------WSEKYATQPEILAYLEHVA-DRFDLRRDI 118 (549)
T ss_dssp ---------------------------------------------------CSSSSCBHHHHHHHHHHHH-HHTTCGGGE
T ss_pred ---------------------------------------------------CccCCCCHHHHHHHHHHHH-HHcCCCccE
Confidence 0112235567777787777 77887 89
Q ss_pred EEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchH
Q 014198 208 VIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGK 249 (429)
Q Consensus 208 ~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~ 249 (429)
++++ |+++..+++...+.|++.+|.++.+|.||+|+|.++..
T Consensus 119 ~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p 161 (549)
T 4ap3_A 119 RFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNA 161 (549)
T ss_dssp ECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEEC
T ss_pred EECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCC
Confidence 9999 99999874555667888888889999999999976543
No 103
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.22 E-value=6.2e-11 Score=109.32 Aligned_cols=115 Identities=17% Similarity=0.239 Sum_probs=82.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDN 132 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 132 (429)
.+||+|||||++|+++|+.|+++|++|+|||+.+..+| .|... ....
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG----------------------------~~~~~---~~~~-- 53 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGG----------------------------QLSAL---YPEK-- 53 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCH----------------------------HHHHH---CTTS--
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCc----------------------------eehhc---CCCc--
Confidence 47999999999999999999999999999999872221 11110 0000
Q ss_pred cCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-
Q 014198 133 YGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK- 211 (429)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~- 211 (429)
... ..+....+.+..+...+.+.+ .+.|+++++++
T Consensus 54 -~~~------------------------------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 89 (332)
T 3lzw_A 54 -YIY------------------------------------------DVAGFPKIRAQELINNLKEQM-AKFDQTICLEQA 89 (332)
T ss_dssp -EEC------------------------------------------CSTTCSSEEHHHHHHHHHHHH-TTSCCEEECSCC
T ss_pred -eEe------------------------------------------ccCCCCCCCHHHHHHHHHHHH-HHhCCcEEccCE
Confidence 000 001111246678888999988 88899999999
Q ss_pred EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCC
Q 014198 212 VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPW 246 (429)
Q Consensus 212 v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~ 246 (429)
|+++..+ ++..+.|.+.++. +.+|.||+|+|..
T Consensus 90 v~~i~~~-~~~~~~v~~~~g~-~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 90 VESVEKQ-ADGVFKLVTNEET-HYSKTVIITAGNG 122 (332)
T ss_dssp EEEEEEC-TTSCEEEEESSEE-EEEEEEEECCTTS
T ss_pred EEEEEEC-CCCcEEEEECCCE-EEeCEEEECCCCC
Confidence 9999987 3323457776664 9999999999984
No 104
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.21 E-value=6.7e-12 Score=119.21 Aligned_cols=132 Identities=21% Similarity=0.375 Sum_probs=91.7
Q ss_pred ccccCCCCCCCcc---CcceEEEeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcE
Q 014198 3 ATLLAPSSAPTYL---PGLRLTLIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAV 79 (429)
Q Consensus 3 ~~~~a~g~~p~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V 79 (429)
.+|||||++|..| ||....++..++..+...+.... ....+|+|||+|.+|+.+|..|++.|.+|
T Consensus 104 ~lviAtG~~~~~~~i~~G~~~~v~~~~~~~~~~~l~~~~------------~~~~~vvViGgG~~g~E~A~~l~~~g~~V 171 (408)
T 2gqw_A 104 TLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGL------------RPQSRLLIVGGGVIGLELAATARTAGVHV 171 (408)
T ss_dssp EEEECCCEEECCCGGGTTCSSCEEECCSHHHHHHHHTTC------------CTTCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred EEEECCCCCCCCCCccCCCCCcEEEECCHHHHHHHHHHh------------hcCCeEEEECCCHHHHHHHHHHHhCCCEE
Confidence 5899999998775 45431133322222211111000 22468999999999999999999999999
Q ss_pred EEEcCCC-CccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccc
Q 014198 80 TLIEKSS-VACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNK 158 (429)
Q Consensus 80 ~lie~~~-~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (429)
+++++.+ +... .
T Consensus 172 tlv~~~~~~l~~--------------------------------------~----------------------------- 184 (408)
T 2gqw_A 172 SLVETQPRLMSR--------------------------------------A----------------------------- 184 (408)
T ss_dssp EEEESSSSSSTT--------------------------------------T-----------------------------
T ss_pred EEEEeCCccccc--------------------------------------c-----------------------------
Confidence 9999986 1100 0
Q ss_pred cCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcC
Q 014198 159 ANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESD 237 (429)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad 237 (429)
.+..+.+.+.+.+ ++.|++++.++ |++++ + + .|++.+|.++.+|
T Consensus 185 ----------------------------~~~~~~~~l~~~l-~~~GV~i~~~~~v~~i~-~-~----~v~~~~g~~i~~D 229 (408)
T 2gqw_A 185 ----------------------------APATLADFVARYH-AAQGVDLRFERSVTGSV-D-G----VVLLDDGTRIAAD 229 (408)
T ss_dssp ----------------------------SCHHHHHHHHHHH-HHTTCEEEESCCEEEEE-T-T----EEEETTSCEEECS
T ss_pred ----------------------------cCHHHHHHHHHHH-HHcCcEEEeCCEEEEEE-C-C----EEEECCCCEEEcC
Confidence 0012233666777 78899999999 99998 4 3 4677788899999
Q ss_pred EEEEcCCCCch
Q 014198 238 AVVLALGPWSG 248 (429)
Q Consensus 238 ~vV~a~G~~s~ 248 (429)
.||+|+|...+
T Consensus 230 ~vi~a~G~~p~ 240 (408)
T 2gqw_A 230 MVVVGIGVLAN 240 (408)
T ss_dssp EEEECSCEEEC
T ss_pred EEEECcCCCcc
Confidence 99999997765
No 105
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.21 E-value=7.5e-11 Score=106.95 Aligned_cols=111 Identities=21% Similarity=0.264 Sum_probs=80.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDN 132 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 132 (429)
++||+|||||++|+++|..|+++|++|+|+|+........... .
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~---------------------------------~--- 45 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHS---------------------------------H--- 45 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCC---------------------------------C---
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhh---------------------------------c---
Confidence 4799999999999999999999999999999976321100000 0
Q ss_pred cCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhc-CcEEEEce
Q 014198 133 YGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDY-GLEVVIGK 211 (429)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~-Gv~v~~~~ 211 (429)
+ .+......+..+...+.+.+ .+. +++++..+
T Consensus 46 ---------------------------------------------~-~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~ 78 (297)
T 3fbs_A 46 ---------------------------------------------G-FLGQDGKAPGEIIAEARRQI-ERYPTIHWVEGR 78 (297)
T ss_dssp ---------------------------------------------S-STTCTTCCHHHHHHHHHHHH-TTCTTEEEEESC
T ss_pred ---------------------------------------------C-CcCCCCCCHHHHHHHHHHHH-HhcCCeEEEEeE
Confidence 0 00111235567777888888 665 78887655
Q ss_pred EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCch
Q 014198 212 VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSG 248 (429)
Q Consensus 212 v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~ 248 (429)
|+++..+ ++. +.|.+.++.++.+|.||+|+|..+.
T Consensus 79 v~~i~~~-~~~-~~v~~~~g~~~~~d~vviAtG~~~~ 113 (297)
T 3fbs_A 79 VTDAKGS-FGE-FIVEIDGGRRETAGRLILAMGVTDE 113 (297)
T ss_dssp EEEEEEE-TTE-EEEEETTSCEEEEEEEEECCCCEEE
T ss_pred EEEEEEc-CCe-EEEEECCCCEEEcCEEEECCCCCCC
Confidence 9999887 443 4578878888999999999998653
No 106
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.21 E-value=1.1e-10 Score=107.51 Aligned_cols=116 Identities=16% Similarity=0.197 Sum_probs=80.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPD 131 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 131 (429)
..+||+|||||++|+++|+.|+++|++|+|||+..+++... ... .+ ..
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~-~~~-~~----------------------------~~-- 54 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGGQIA-WSE-EV----------------------------EN-- 54 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGG-GCS-CB----------------------------CC--
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCCCCcccc-ccc-cc----------------------------cc--
Confidence 35899999999999999999999999999999985332111 000 00 00
Q ss_pred CcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce
Q 014198 132 NYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK 211 (429)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~ 211 (429)
..++ + ..+.+..+.+.+.+.+ ++.|++++.+.
T Consensus 55 --------------------------------------------~~~~-~--~~~~~~~~~~~l~~~~-~~~gv~~~~~~ 86 (325)
T 2q7v_A 55 --------------------------------------------FPGF-P--EPIAGMELAQRMHQQA-EKFGAKVEMDE 86 (325)
T ss_dssp --------------------------------------------STTC-S--SCBCHHHHHHHHHHHH-HHTTCEEEECC
T ss_pred --------------------------------------------CCCC-C--CCCCHHHHHHHHHHHH-HHcCCEEEeee
Confidence 0000 0 0134556777888888 78899998844
Q ss_pred EEEEEEc--cCCcEEEEEEeCCeEEEcCEEEEcCCCCch
Q 014198 212 VERVGVG--EGGRVESVMIEGGRVVESDAVVLALGPWSG 248 (429)
Q Consensus 212 v~~i~~~--~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~ 248 (429)
|+++..+ ++. .+.|.+.++..+.+|.||+|+|.++.
T Consensus 87 v~~i~~~~~~~~-~~~v~~~~g~~~~~~~vv~AtG~~~~ 124 (325)
T 2q7v_A 87 VQGVQHDATSHP-YPFTVRGYNGEYRAKAVILATGADPR 124 (325)
T ss_dssp EEEEEECTTSSS-CCEEEEESSCEEEEEEEEECCCEEEC
T ss_pred EEEEEeccCCCc-eEEEEECCCCEEEeCEEEECcCCCcC
Confidence 9999875 232 13456677889999999999998653
No 107
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.20 E-value=9e-12 Score=121.17 Aligned_cols=131 Identities=26% Similarity=0.331 Sum_probs=93.0
Q ss_pred ccccCCCCCCCcc--CcceEEEeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHC---CC
Q 014198 3 ATLLAPSSAPTYL--PGLRLTLIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKK---GA 77 (429)
Q Consensus 3 ~~~~a~g~~p~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~---G~ 77 (429)
.+|||||++|..| ||... +++..+... .. ....+++|||+|.+|+.+|..|++. |.
T Consensus 154 ~lviAtGs~p~~p~i~g~~~-~~~~~~~~~---------------~~---~~~~~vvViGgG~ig~E~A~~l~~~~~~g~ 214 (490)
T 1fec_A 154 YILLATGSWPQHLGIEGDDL-CITSNEAFY---------------LD---EAPKRALCVGGGYISIEFAGIFNAYKARGG 214 (490)
T ss_dssp EEEECCCEEECCCCSBTGGG-CBCHHHHTT---------------CS---SCCSEEEEECSSHHHHHHHHHHHHHSCTTC
T ss_pred EEEEeCCCCCCCCCCCCccc-eecHHHHhh---------------hh---hcCCeEEEECCCHHHHHHHHHHHhhccCcC
Confidence 5899999999876 45421 222221100 00 2246899999999999999999999 99
Q ss_pred cEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCcc
Q 014198 78 AVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSN 157 (429)
Q Consensus 78 ~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (429)
+|+++++.+. ++..+
T Consensus 215 ~Vtlv~~~~~-------------------------------~l~~~---------------------------------- 229 (490)
T 1fec_A 215 QVDLAYRGDM-------------------------------ILRGF---------------------------------- 229 (490)
T ss_dssp EEEEEESSSS-------------------------------SSTTS----------------------------------
T ss_pred eEEEEEcCCC-------------------------------ccccc----------------------------------
Confidence 9999999861 00000
Q ss_pred ccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEc
Q 014198 158 KANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVES 236 (429)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~a 236 (429)
...+.+.+.+.+ ++.|+++++++ |+++..+ ++....|++.+|.++.+
T Consensus 230 ------------------------------d~~~~~~l~~~l-~~~GV~i~~~~~v~~i~~~-~~~~~~v~~~~G~~i~~ 277 (490)
T 1fec_A 230 ------------------------------DSELRKQLTEQL-RANGINVRTHENPAKVTKN-ADGTRHVVFESGAEADY 277 (490)
T ss_dssp ------------------------------CHHHHHHHHHHH-HHTTEEEEETCCEEEEEEC-TTSCEEEEETTSCEEEE
T ss_pred ------------------------------CHHHHHHHHHHH-HhCCCEEEeCCEEEEEEEc-CCCEEEEEECCCcEEEc
Confidence 012333677777 78899999999 9999876 33334577778888999
Q ss_pred CEEEEcCCCCchH
Q 014198 237 DAVVLALGPWSGK 249 (429)
Q Consensus 237 d~vV~a~G~~s~~ 249 (429)
|.||+|+|..++.
T Consensus 278 D~vv~a~G~~p~~ 290 (490)
T 1fec_A 278 DVVMLAIGRVPRS 290 (490)
T ss_dssp SEEEECSCEEESC
T ss_pred CEEEEccCCCcCc
Confidence 9999999977654
No 108
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.20 E-value=1e-11 Score=116.95 Aligned_cols=197 Identities=14% Similarity=0.086 Sum_probs=99.9
Q ss_pred eeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHHhhhcc--cccc
Q 014198 184 AQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFELLASM--FRVS 260 (429)
Q Consensus 184 ~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~~~~~~--~~~~ 260 (429)
..++...+.+.|.+.+ .+.|+++++++ |++++.. ..++||.||.|+|.+|. ...+... ....
T Consensus 93 ~~~~r~~l~~~L~~~~-~~~gv~i~~~~~v~~i~~~-------------~~~~ad~vV~AdG~~S~-R~~l~~~~g~~~~ 157 (381)
T 3c4a_A 93 CGVERRGLVHALRDKC-RSQGIAIRFESPLLEHGEL-------------PLADYDLVVLANGVNHK-TAHFTEALVPQVD 157 (381)
T ss_dssp EEEEHHHHHHHHHHHH-HHTTCEEETTCCCCSGGGC-------------CGGGCSEEEECCGGGGG-TCCSSGGGCCCCE
T ss_pred eeecHHHHHHHHHHHH-HHCCCEEEeCCEeccchhc-------------ccccCCEEEECCCCCch-HHhhhhhcCCCcc
Confidence 4688899999999999 77799999999 9888531 12579999999999998 5433111 1111
Q ss_pred cceeeEEEecCCCCCCCCCceeEeeeccCCCCCCCCCCCceEecCCCcEEEeccCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 014198 261 GLKAHSIILEPKEADAITPHALFLSYYPAQGEGGKPMDPEVYPRPTGEVYLCGMSSEQEVPDDPETVSGDPASIQVLKRV 340 (429)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~ 340 (429)
...++........ ............ ..+. ...+++|..++...++..................++..+.+.+.
T Consensus 158 ~~~~~~~~~~~~~--~~~~~~~~~~~~-~~g~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 230 (381)
T 3c4a_A 158 YGRNKYIWYGTSQ--LFDQMNLVFRTH-GKDI----FIAHAYKYSDTMSTFIVECSEETYARARLGEMSEEASAEYVAKV 230 (381)
T ss_dssp EEEEEEEEEEESS--CCSSEEEEEEEE-TTEE----EEEEEEECSSSCEEEEEEECHHHHHHTTSSSSCHHHHHHHHHHH
T ss_pred cCCccEEEEecCC--CCCcceeeEeeC-CCcE----EEEEEEEecCCeEEEEEECCccccccCCcccCChHHHHHHHHHH
Confidence 1112222211111 111112222111 1110 00125777666543322111100000001111122344566666
Q ss_pred HHHhccccCcccccce-eeeee-----cccCCCCCceeccCCCCCcEEEEecCCCccchhhHHHHHHHHHHHhc
Q 014198 341 ARTVSSHLGEEAQVKA-EQACF-----LPCTDDGVPVIGELPGIKGCYVGTGHNCWGILNGPATGAALAELVMD 408 (429)
Q Consensus 341 ~~~~~p~l~~~~~~~~-~~~g~-----r~~t~d~~p~ig~~~~~~~~~~~~G~~~~G~~~a~~~a~~la~~i~~ 408 (429)
+....|...- ..... .|.-+ .....++..++|... +....+.|+|+.+|...|..+++.|..
T Consensus 231 ~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~grv~LvGDAA-----h~~~P~~GqG~~~al~Da~~La~~L~~ 298 (381)
T 3c4a_A 231 FQAELGGHGL-VSQPGLGWRNFMTLSHDRCHDGKLVLLGDAL-----QSGHFSIGHGTTMAVVVAQLLVKALCT 298 (381)
T ss_dssp THHHHTTCCC-BCCTTTCSEEEEECCCSCSEETTEEECGGGT-----CCCCGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred hcccCCCchh-hcCCCcceeeeccccCCCcccCCEEEEEccc-----cccCCCccccHHHHHHHHHHHHHHHhc
Confidence 6665443211 00000 12111 112234456667443 555677899999999999999999854
No 109
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.19 E-value=1.4e-10 Score=106.04 Aligned_cols=113 Identities=21% Similarity=0.345 Sum_probs=80.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDN 132 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 132 (429)
+||+|||||++|+++|+.|+++|+ +|+|||+..+++.... .. . ...
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~gg~~~~-~~-~----------------------------~~~--- 48 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITG-SS-E----------------------------IEN--- 48 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTTCGGGG-CS-C----------------------------BCC---
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCCccccc-cc-c----------------------------ccc---
Confidence 699999999999999999999999 9999999754321110 00 0 000
Q ss_pred cCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEceE
Q 014198 133 YGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGKV 212 (429)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~v 212 (429)
..+ ....+++..+.+.+.+.+ .+.|++++...|
T Consensus 49 -------------------------------------------~~~---~~~~~~~~~~~~~l~~~~-~~~~v~~~~~~v 81 (311)
T 2q0l_A 49 -------------------------------------------YPG---VKEVVSGLDFMQPWQEQC-FRFGLKHEMTAV 81 (311)
T ss_dssp -------------------------------------------STT---CCSCBCHHHHHHHHHHHH-HTTSCEEECSCE
T ss_pred -------------------------------------------CCC---CcccCCHHHHHHHHHHHH-HHcCCEEEEEEE
Confidence 000 001245667777888888 788999998339
Q ss_pred EEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCch
Q 014198 213 ERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSG 248 (429)
Q Consensus 213 ~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~ 248 (429)
+++..+ ++. +.+.+.++.++.+|.||+|+|.++.
T Consensus 82 ~~i~~~-~~~-~~v~~~~g~~~~~~~vv~AtG~~~~ 115 (311)
T 2q0l_A 82 QRVSKK-DSH-FVILAEDGKTFEAKSVIIATGGSPK 115 (311)
T ss_dssp EEEEEE-TTE-EEEEETTSCEEEEEEEEECCCEEEC
T ss_pred EEEEEc-CCE-EEEEEcCCCEEECCEEEECCCCCCC
Confidence 999876 443 3466667788999999999997654
No 110
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.18 E-value=1.1e-11 Score=120.26 Aligned_cols=139 Identities=22% Similarity=0.299 Sum_probs=96.4
Q ss_pred ccccCCCCCCCcc--CcceEE-EeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHC-CCc
Q 014198 3 ATLLAPSSAPTYL--PGLRLT-LIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKK-GAA 78 (429)
Q Consensus 3 ~~~~a~g~~p~~~--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~-G~~ 78 (429)
.+|||||++|..| ||.... ++..++..+...+.... . .....+++|||+|.+|+.+|..|++. |.+
T Consensus 116 ~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l--------~--~~~~~~vvViGgG~~g~e~A~~l~~~~g~~ 185 (472)
T 3iwa_A 116 KLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAI--------S--AGEVSKAVIVGGGFIGLEMAVSLADMWGID 185 (472)
T ss_dssp EEEECCCEEECCCSCTTTTSBTEEECCSHHHHHHHHHHC--------C--TTSCSEEEEECCSHHHHHHHHHHHHHHCCE
T ss_pred EEEEeCCCCcCCCCCCCCCCCCEEEeCCHHHHHHHHHHh--------h--cCCCCEEEEECCCHHHHHHHHHHHHhcCCc
Confidence 5899999999876 565322 33333222211111000 0 01246899999999999999999999 999
Q ss_pred EEEEcCCC-CccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCcc
Q 014198 79 VTLIEKSS-VACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSN 157 (429)
Q Consensus 79 V~lie~~~-~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (429)
|+++++.+ +... .
T Consensus 186 Vtlv~~~~~~l~~--------------------------------------~---------------------------- 199 (472)
T 3iwa_A 186 TTVVELADQIMPG--------------------------------------F---------------------------- 199 (472)
T ss_dssp EEEECSSSSSSTT--------------------------------------T----------------------------
T ss_pred EEEEEccCccccc--------------------------------------c----------------------------
Confidence 99999976 1100 0
Q ss_pred ccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEc
Q 014198 158 KANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVES 236 (429)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~a 236 (429)
....+.+.+.+.+ ++.|++++.++ |++++.+ ++++. +.+.+|+++.+
T Consensus 200 -----------------------------~~~~~~~~l~~~l-~~~GV~i~~~~~v~~i~~~-~~~v~-v~~~~g~~i~a 247 (472)
T 3iwa_A 200 -----------------------------TSKSLSQMLRHDL-EKNDVVVHTGEKVVRLEGE-NGKVA-RVITDKRTLDA 247 (472)
T ss_dssp -----------------------------SCHHHHHHHHHHH-HHTTCEEECSCCEEEEEES-SSBEE-EEEESSCEEEC
T ss_pred -----------------------------cCHHHHHHHHHHH-HhcCCEEEeCCEEEEEEcc-CCeEE-EEEeCCCEEEc
Confidence 0012333677777 78899999999 9999876 56654 77778889999
Q ss_pred CEEEEcCCCCchH
Q 014198 237 DAVVLALGPWSGK 249 (429)
Q Consensus 237 d~vV~a~G~~s~~ 249 (429)
|.||+|+|..++.
T Consensus 248 D~Vv~a~G~~p~~ 260 (472)
T 3iwa_A 248 DLVILAAGVSPNT 260 (472)
T ss_dssp SEEEECSCEEECC
T ss_pred CEEEECCCCCcCH
Confidence 9999999987653
No 111
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.18 E-value=1.2e-11 Score=120.01 Aligned_cols=131 Identities=19% Similarity=0.269 Sum_probs=92.1
Q ss_pred ccccCCCCCCCcc---CcceEEEeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcE
Q 014198 3 ATLLAPSSAPTYL---PGLRLTLIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAV 79 (429)
Q Consensus 3 ~~~~a~g~~p~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V 79 (429)
.+|||||++|..| ||... +++...+ + ... ....+++|||||.+|+.+|..|++.|.+|
T Consensus 151 ~lviAtGs~p~~p~~i~g~~~-~~~~~~~-----~-~l~------------~~~~~vvViGgG~ig~E~A~~l~~~g~~V 211 (479)
T 2hqm_A 151 HILVATGGKAIFPENIPGFEL-GTDSDGF-----F-RLE------------EQPKKVVVVGAGYIGIELAGVFHGLGSET 211 (479)
T ss_dssp EEEECCCEEECCCTTSTTGGG-SBCHHHH-----H-HCS------------SCCSEEEEECSSHHHHHHHHHHHHTTCEE
T ss_pred EEEEcCCCCCCCCCCCCCccc-ccchHHH-----h-ccc------------ccCCeEEEECCCHHHHHHHHHHHHcCCce
Confidence 5899999999876 34421 1111111 0 000 23468999999999999999999999999
Q ss_pred EEEcCCC-CccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccc
Q 014198 80 TLIEKSS-VACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNK 158 (429)
Q Consensus 80 ~lie~~~-~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (429)
+++++.+ +.. .+
T Consensus 212 tlv~~~~~~l~--------------------------------~~----------------------------------- 224 (479)
T 2hqm_A 212 HLVIRGETVLR--------------------------------KF----------------------------------- 224 (479)
T ss_dssp EEECSSSSSCT--------------------------------TS-----------------------------------
T ss_pred EEEEeCCcccc--------------------------------cc-----------------------------------
Confidence 9999986 110 00
Q ss_pred cCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCC-eEEEc
Q 014198 159 ANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGG-RVVES 236 (429)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g-~~i~a 236 (429)
...+.+.+.+.+ ++.|+++++++ |+++..++++.+..|.+.+| .++.+
T Consensus 225 -----------------------------d~~~~~~l~~~l-~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~ 274 (479)
T 2hqm_A 225 -----------------------------DECIQNTITDHY-VKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDV 274 (479)
T ss_dssp -----------------------------CHHHHHHHHHHH-HHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEE
T ss_pred -----------------------------CHHHHHHHHHHH-HhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEc
Confidence 012223566667 77899999999 99998753443456777788 78999
Q ss_pred CEEEEcCCCCchH
Q 014198 237 DAVVLALGPWSGK 249 (429)
Q Consensus 237 d~vV~a~G~~s~~ 249 (429)
|.||+|+|..++.
T Consensus 275 D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 275 DELIWTIGRKSHL 287 (479)
T ss_dssp SEEEECSCEEECC
T ss_pred CEEEECCCCCCcc
Confidence 9999999976554
No 112
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.17 E-value=3.8e-10 Score=107.88 Aligned_cols=36 Identities=28% Similarity=0.525 Sum_probs=32.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
++++||+|||||++|+++|+.|+++|++|+|||+..
T Consensus 20 ~m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 20 HMKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp ---CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 345799999999999999999999999999999987
No 113
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.17 E-value=1.2e-11 Score=119.57 Aligned_cols=129 Identities=23% Similarity=0.333 Sum_probs=91.6
Q ss_pred ccccCCCCCCCcc--CcceEEEeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcEE
Q 014198 3 ATLLAPSSAPTYL--PGLRLTLIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAVT 80 (429)
Q Consensus 3 ~~~~a~g~~p~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~ 80 (429)
.+|||||++|..| ||... +++..+.. . .. ....+|+|||||.+|+++|..|++.|.+|+
T Consensus 133 ~lviAtGs~p~~p~i~G~~~-~~~~~~~~---~---~~------------~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vt 193 (463)
T 2r9z_A 133 HIVIATGGRPIVPRLPGAEL-GITSDGFF---A---LQ------------QQPKRVAIIGAGYIGIELAGLLRSFGSEVT 193 (463)
T ss_dssp EEEECCCEEECCCSCTTGGG-SBCHHHHH---H---CS------------SCCSEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred EEEECCCCCCCCCCCCCccc-eecHHHHh---h---hh------------ccCCEEEEECCCHHHHHHHHHHHhcCCEEE
Confidence 5899999999876 45421 22221110 0 00 224589999999999999999999999999
Q ss_pred EEcCCC-CccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCcccc
Q 014198 81 LIEKSS-VACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKA 159 (429)
Q Consensus 81 lie~~~-~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (429)
++++.+ +.. .+
T Consensus 194 lv~~~~~~l~--------------------------------~~------------------------------------ 205 (463)
T 2r9z_A 194 VVALEDRLLF--------------------------------QF------------------------------------ 205 (463)
T ss_dssp EECSSSSSST--------------------------------TS------------------------------------
T ss_pred EEEcCCcccc--------------------------------cc------------------------------------
Confidence 999986 110 00
Q ss_pred CCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCe-EEEcC
Q 014198 160 NSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGR-VVESD 237 (429)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~-~i~ad 237 (429)
...+.+.+.+.+ ++.|++++.++ |++++.+ ++. ..|++.+|. ++.+|
T Consensus 206 ----------------------------~~~~~~~l~~~l-~~~gv~i~~~~~v~~i~~~-~~~-~~v~~~~G~~~i~~D 254 (463)
T 2r9z_A 206 ----------------------------DPLLSATLAENM-HAQGIETHLEFAVAALERD-AQG-TTLVAQDGTRLEGFD 254 (463)
T ss_dssp ----------------------------CHHHHHHHHHHH-HHTTCEEESSCCEEEEEEE-TTE-EEEEETTCCEEEEES
T ss_pred ----------------------------CHHHHHHHHHHH-HHCCCEEEeCCEEEEEEEe-CCe-EEEEEeCCcEEEEcC
Confidence 011222566667 77899999999 9999876 333 457777887 89999
Q ss_pred EEEEcCCCCchH
Q 014198 238 AVVLALGPWSGK 249 (429)
Q Consensus 238 ~vV~a~G~~s~~ 249 (429)
.||+|+|..++.
T Consensus 255 ~vv~a~G~~p~~ 266 (463)
T 2r9z_A 255 SVIWAVGRAPNT 266 (463)
T ss_dssp EEEECSCEEESC
T ss_pred EEEECCCCCcCC
Confidence 999999976654
No 114
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.17 E-value=1.8e-11 Score=118.19 Aligned_cols=129 Identities=22% Similarity=0.356 Sum_probs=89.3
Q ss_pred ccccCCCCCCCccC--cceEEEeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcEE
Q 014198 3 ATLLAPSSAPTYLP--GLRLTLIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAVT 80 (429)
Q Consensus 3 ~~~~a~g~~p~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~ 80 (429)
.+|||||++|..|| |....+++..+... .. ....+|+|||+|.+|+.+|..|++.|.+|+
T Consensus 136 ~lViATGs~p~~~~~~g~~~~v~~~~~~~~---------------~~---~~~~~vvViGgG~~g~e~A~~l~~~g~~Vt 197 (455)
T 1ebd_A 136 NAIIATGSRPIELPNFKFSNRILDSTGALN---------------LG---EVPKSLVVIGGGYIGIELGTAYANFGTKVT 197 (455)
T ss_dssp EEEECCCEEECCBTTBCCCSSEECHHHHHT---------------CS---SCCSEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred EEEEecCCCCCCCCCCCccceEecHHHHhc---------------cc---cCCCeEEEECCCHHHHHHHHHHHHcCCcEE
Confidence 58999999998775 32211222221100 00 224689999999999999999999999999
Q ss_pred EEcCCC-CccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCcccc
Q 014198 81 LIEKSS-VACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKA 159 (429)
Q Consensus 81 lie~~~-~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (429)
|+|+.+ +.. .
T Consensus 198 lv~~~~~~l~--------------------------------~------------------------------------- 208 (455)
T 1ebd_A 198 ILEGAGEILS--------------------------------G------------------------------------- 208 (455)
T ss_dssp EEESSSSSST--------------------------------T-------------------------------------
T ss_pred EEEcCCcccc--------------------------------c-------------------------------------
Confidence 999976 110 0
Q ss_pred CCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEe---CCeEEE
Q 014198 160 NSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIE---GGRVVE 235 (429)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~---~g~~i~ 235 (429)
....+.+.+.+.+ ++.|++++.++ |++++.+ ++.+ .+.+. ++.++.
T Consensus 209 ---------------------------~~~~~~~~l~~~l-~~~gv~i~~~~~v~~i~~~-~~~~-~v~~~~~g~~~~~~ 258 (455)
T 1ebd_A 209 ---------------------------FEKQMAAIIKKRL-KKKGVEVVTNALAKGAEER-EDGV-TVTYEANGETKTID 258 (455)
T ss_dssp ---------------------------SCHHHHHHHHHHH-HHTTCEEEESEEEEEEEEE-TTEE-EEEEEETTEEEEEE
T ss_pred ---------------------------cCHHHHHHHHHHH-HHCCCEEEeCCEEEEEEEe-CCeE-EEEEEeCCceeEEE
Confidence 0012233566677 77899999999 9999876 4433 34443 356799
Q ss_pred cCEEEEcCCCCch
Q 014198 236 SDAVVLALGPWSG 248 (429)
Q Consensus 236 ad~vV~a~G~~s~ 248 (429)
+|.||+|+|..++
T Consensus 259 ~D~vv~a~G~~p~ 271 (455)
T 1ebd_A 259 ADYVLVTVGRRPN 271 (455)
T ss_dssp ESEEEECSCEEES
T ss_pred cCEEEECcCCCcc
Confidence 9999999997654
No 115
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.17 E-value=8.8e-11 Score=115.27 Aligned_cols=140 Identities=14% Similarity=0.084 Sum_probs=87.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHH-HHHHhCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRS-LAEELNGP 130 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~ 130 (429)
..+||+|||||++|+++|+.|++.|++|+|||++...+|+...+. .++...+.. . ..|.. +..+...
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~---yPg~~~d~~-----~---~~y~~~f~~~~~~- 75 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNR---YPGCRLDTE-----S---YAYGYFALKGIIP- 75 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCC---CTTCBCSSC-----H---HHHCHHHHTTSST-
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCC---CCceeecCc-----h---hhcccccCccccc-
Confidence 468999999999999999999999999999999873222211000 000000000 0 11111 0000000
Q ss_pred CCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCc--EEE
Q 014198 131 DNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGL--EVV 208 (429)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv--~v~ 208 (429)
.+..........++...+.+.+ ++.|+ +++
T Consensus 76 -----------------------------------------------~~~~~~~~~~~~ei~~yl~~~~-~~~~l~~~i~ 107 (545)
T 3uox_A 76 -----------------------------------------------EWEWSENFASQPEMLRYVNRAA-DAMDVRKHYR 107 (545)
T ss_dssp -----------------------------------------------TCCCSBSSCBHHHHHHHHHHHH-HHHTCGGGEE
T ss_pred -----------------------------------------------CCCccccCCCHHHHHHHHHHHH-HHcCCcCcEE
Confidence 0000112234566667777777 77777 799
Q ss_pred Ece-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHH
Q 014198 209 IGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFE 251 (429)
Q Consensus 209 ~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~ 251 (429)
+++ |+++..+++...+.|++.+|.++.+|.||+|+|.++....
T Consensus 108 ~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~ 151 (545)
T 3uox_A 108 FNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRM 151 (545)
T ss_dssp CSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---
T ss_pred ECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcC
Confidence 999 9999876454556788888889999999999998765443
No 116
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.17 E-value=1.1e-10 Score=107.84 Aligned_cols=121 Identities=21% Similarity=0.299 Sum_probs=82.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGP 130 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 130 (429)
+..+||+|||||++|+++|+.|+++|++|+|||+.+. .+...+|.+.... ...
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~---~~~~~gg~~~~~~----------------------~~~-- 72 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMA---NGIAAGGQLTTTT----------------------EIE-- 72 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSB---TTBCTTCGGGGSS----------------------EEC--
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCC---CCCCcCcccccch----------------------hhc--
Confidence 4578999999999999999999999999999999651 1111111111000 000
Q ss_pred CCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEc
Q 014198 131 DNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIG 210 (429)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~ 210 (429)
.+......+.+..+...+.+.+ .+.|++++.+
T Consensus 73 -----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~-~~~gv~i~~~ 104 (338)
T 3itj_A 73 -----------------------------------------------NFPGFPDGLTGSELMDRMREQS-TKFGTEIITE 104 (338)
T ss_dssp -----------------------------------------------CSTTCTTCEEHHHHHHHHHHHH-HHTTCEEECS
T ss_pred -----------------------------------------------ccCCCcccCCHHHHHHHHHHHH-HHcCCEEEEe
Confidence 0000012355677888899988 8889999998
Q ss_pred eEEEEEEccCCcEEEEEE---eCCeEEEcCEEEEcCCCCch
Q 014198 211 KVERVGVGEGGRVESVMI---EGGRVVESDAVVLALGPWSG 248 (429)
Q Consensus 211 ~v~~i~~~~~g~v~~v~~---~~g~~i~ad~vV~a~G~~s~ 248 (429)
+|+++..+ ++.+ .+.+ .++..+.+|.||+|+|..+.
T Consensus 105 ~v~~i~~~-~~~~-~v~~~~~~~~~~~~~d~vvlAtG~~~~ 143 (338)
T 3itj_A 105 TVSKVDLS-SKPF-KLWTEFNEDAEPVTTDAIILATGASAK 143 (338)
T ss_dssp CEEEEECS-SSSE-EEEETTCSSSCCEEEEEEEECCCEEEC
T ss_pred EEEEEEEc-CCEE-EEEEEecCCCcEEEeCEEEECcCCCcC
Confidence 88888876 4443 3555 35678999999999998543
No 117
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.17 E-value=1.8e-10 Score=105.45 Aligned_cols=121 Identities=17% Similarity=0.264 Sum_probs=82.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGP 130 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 130 (429)
...+||+|||||++|+++|..|+++|++|+|+|+...++.+.+ |.+.... . +..
T Consensus 2 ~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~---G~~~~~~----~------------------i~~- 55 (314)
T 4a5l_A 2 SNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAG---GQLTTTT----I------------------IEN- 55 (314)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTT---CGGGGSS----E------------------ECC-
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccC---CCcCChH----H------------------hhh-
Confidence 3468999999999999999999999999999999874432211 1111100 0 000
Q ss_pred CCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEc
Q 014198 131 DNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIG 210 (429)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~ 210 (429)
..+ ..-.+++.++...+.+.+ .+.++++...
T Consensus 56 ---------------------------------------------~~g---~~~~i~~~~l~~~~~~~~-~~~~~~~~~~ 86 (314)
T 4a5l_A 56 ---------------------------------------------FPG---FPNGIDGNELMMNMRTQS-EKYGTTIITE 86 (314)
T ss_dssp ---------------------------------------------STT---CTTCEEHHHHHHHHHHHH-HHTTCEEECC
T ss_pred ---------------------------------------------ccC---CcccCCHHHHHHHHHHHH-hhcCcEEEEe
Confidence 000 001245677888888888 7889998877
Q ss_pred eEEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCch
Q 014198 211 KVERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSG 248 (429)
Q Consensus 211 ~v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~ 248 (429)
++...... ... ..+.+.++.++.+|.+|+|||....
T Consensus 87 ~v~~~~~~-~~~-~~~~~~~~~~~~~~~liiATG~~~~ 122 (314)
T 4a5l_A 87 TIDHVDFS-TQP-FKLFTEEGKEVLTKSVIIATGATAK 122 (314)
T ss_dssp CEEEEECS-SSS-EEEEETTCCEEEEEEEEECCCEEEC
T ss_pred EEEEeecC-CCc-eEEEECCCeEEEEeEEEEccccccc
Confidence 76666654 222 3356667889999999999997543
No 118
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.16 E-value=1.3e-11 Score=119.77 Aligned_cols=132 Identities=20% Similarity=0.248 Sum_probs=90.6
Q ss_pred ccccCCCCCCCccC--cceEE-EeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcE
Q 014198 3 ATLLAPSSAPTYLP--GLRLT-LIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAV 79 (429)
Q Consensus 3 ~~~~a~g~~p~~~~--g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V 79 (429)
.+|||||++|..|| |.... +++..+... .. ....+|+|||+|.+|+.+|..|++.|.+|
T Consensus 143 ~lViAtGs~p~~p~i~g~~~~~v~t~~~~~~---------------~~---~~~~~vvViGgG~~g~E~A~~l~~~g~~V 204 (474)
T 1zmd_A 143 NILIATGSEVTPFPGITIDEDTIVSSTGALS---------------LK---KVPEKMVVIGAGVIGVELGSVWQRLGADV 204 (474)
T ss_dssp EEEECCCEEECCCTTCCCCSSSEECHHHHTT---------------CS---SCCSEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred EEEECCCCCCCCCCCCCCCcCcEEcHHHHhh---------------cc---ccCceEEEECCCHHHHHHHHHHHHcCCEE
Confidence 58999999998775 43211 222222110 00 12468999999999999999999999999
Q ss_pred EEEcCCC-CccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccc
Q 014198 80 TLIEKSS-VACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNK 158 (429)
Q Consensus 80 ~lie~~~-~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (429)
+|+|+.+ +... .
T Consensus 205 tlv~~~~~~l~~-------------------------------~------------------------------------ 217 (474)
T 1zmd_A 205 TAVEFLGHVGGV-------------------------------G------------------------------------ 217 (474)
T ss_dssp EEECSSSSSSCS-------------------------------S------------------------------------
T ss_pred EEEeccCccCCc-------------------------------c------------------------------------
Confidence 9999986 1100 0
Q ss_pred cCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEE-----eCCe
Q 014198 159 ANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMI-----EGGR 232 (429)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~-----~~g~ 232 (429)
....+.+.+.+.+ ++.|+++++++ |+++..+ ++....+.+ .++.
T Consensus 218 ----------------------------~~~~~~~~l~~~l-~~~Gv~i~~~~~v~~i~~~-~~~~~~v~~~~~~~~~~~ 267 (474)
T 1zmd_A 218 ----------------------------IDMEISKNFQRIL-QKQGFKFKLNTKVTGATKK-SDGKIDVSIEAASGGKAE 267 (474)
T ss_dssp ----------------------------CCHHHHHHHHHHH-HHTTCEEECSEEEEEEEEC-TTSCEEEEEEETTSCCCE
T ss_pred ----------------------------cCHHHHHHHHHHH-HHCCCEEEeCceEEEEEEc-CCceEEEEEEecCCCCce
Confidence 0012333666777 78899999999 9999876 433123443 3567
Q ss_pred EEEcCEEEEcCCCCchH
Q 014198 233 VVESDAVVLALGPWSGK 249 (429)
Q Consensus 233 ~i~ad~vV~a~G~~s~~ 249 (429)
++.+|.||+|+|..++.
T Consensus 268 ~i~~D~vv~a~G~~p~~ 284 (474)
T 1zmd_A 268 VITCDVLLVCIGRRPFT 284 (474)
T ss_dssp EEEESEEEECSCEEECC
T ss_pred EEEcCEEEECcCCCcCC
Confidence 89999999999976553
No 119
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.16 E-value=2e-11 Score=119.16 Aligned_cols=130 Identities=22% Similarity=0.295 Sum_probs=93.6
Q ss_pred ccccCCCCCCCccC--cceEE-EeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcE
Q 014198 3 ATLLAPSSAPTYLP--GLRLT-LIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAV 79 (429)
Q Consensus 3 ~~~~a~g~~p~~~~--g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V 79 (429)
.+|||||++|..|| |.... +++..+.... . ....+++|||+|.+|+.+|..|++.|.+|
T Consensus 147 ~lviATGs~p~~p~i~g~~~~~v~~~~~~~~~---------------~---~~~~~vvViGgG~ig~E~A~~l~~~g~~V 208 (499)
T 1xdi_A 147 VVLVATGASPRILPSAQPDGERILTWRQLYDL---------------D---ALPDHLIVVGSGVTGAEFVDAYTELGVPV 208 (499)
T ss_dssp EEEECCCEEECCCGGGCCCSSSEEEGGGGGGC---------------S---SCCSSEEEESCSHHHHHHHHHHHHTTCCE
T ss_pred EEEEcCCCCCCCCCCCCCCcCcEEehhHhhhh---------------h---ccCCeEEEECCCHHHHHHHHHHHHcCCeE
Confidence 57999999998764 43221 3333222110 0 22468999999999999999999999999
Q ss_pred EEEcCCC-CccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccc
Q 014198 80 TLIEKSS-VACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNK 158 (429)
Q Consensus 80 ~lie~~~-~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (429)
+++++.+ +.. .
T Consensus 209 tlv~~~~~~l~--------------------------------~------------------------------------ 220 (499)
T 1xdi_A 209 TVVASQDHVLP--------------------------------Y------------------------------------ 220 (499)
T ss_dssp EEECSSSSSSC--------------------------------C------------------------------------
T ss_pred EEEEcCCcccc--------------------------------c------------------------------------
Confidence 9999986 110 0
Q ss_pred cCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcC
Q 014198 159 ANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESD 237 (429)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad 237 (429)
....+.+.+.+.+ ++.|+++++++ |+++..+ ++.+ .+.+.++.++.+|
T Consensus 221 ----------------------------~d~~~~~~l~~~l-~~~GV~i~~~~~V~~i~~~-~~~v-~v~~~~g~~i~aD 269 (499)
T 1xdi_A 221 ----------------------------EDADAALVLEESF-AERGVRLFKNARAASVTRT-GAGV-LVTMTDGRTVEGS 269 (499)
T ss_dssp ----------------------------SSHHHHHHHHHHH-HHTTCEEETTCCEEEEEEC-SSSE-EEEETTSCEEEES
T ss_pred ----------------------------cCHHHHHHHHHHH-HHCCCEEEeCCEEEEEEEe-CCEE-EEEECCCcEEEcC
Confidence 0012333677777 78899999999 9999876 4444 4666678889999
Q ss_pred EEEEcCCCCchH
Q 014198 238 AVVLALGPWSGK 249 (429)
Q Consensus 238 ~vV~a~G~~s~~ 249 (429)
.||+|+|.+++.
T Consensus 270 ~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 270 HALMTIGSVPNT 281 (499)
T ss_dssp EEEECCCEEECC
T ss_pred EEEECCCCCcCC
Confidence 999999987664
No 120
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.16 E-value=2.5e-12 Score=120.27 Aligned_cols=130 Identities=18% Similarity=0.276 Sum_probs=89.5
Q ss_pred ccccCCCCCCCcc--CcceEEEeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcEE
Q 014198 3 ATLLAPSSAPTYL--PGLRLTLIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAVT 80 (429)
Q Consensus 3 ~~~~a~g~~p~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~ 80 (429)
.+|||||++|..| ||.+. +++.++..+...+.... ....+++|||+|.+|+.+|..|++.|.+|+
T Consensus 104 ~lViATGs~p~~p~i~G~~~-v~~~~~~~~~~~l~~~~------------~~~~~vvViGgG~~g~E~A~~l~~~g~~Vt 170 (367)
T 1xhc_A 104 TLVLATGARAREPQIKGKEY-LLTLRTIFDADRIKESI------------ENSGEAIIIGGGFIGLELAGNLAEAGYHVK 170 (367)
T ss_dssp EEEECCCEEECCCCSBTGGG-EECCCSHHHHHHHHHHH------------HHHSEEEEEECSHHHHHHHHHHHHTTCEEE
T ss_pred EEEECCCCCCCCCCCCCcCC-EEEEcCHHHHHHHHHHh------------hcCCcEEEECCCHHHHHHHHHHHhCCCEEE
Confidence 5899999999876 45221 33333322222111000 013589999999999999999999999999
Q ss_pred EEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccccC
Q 014198 81 LIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKAN 160 (429)
Q Consensus 81 lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (429)
++|+.+.. +. +
T Consensus 171 lv~~~~~~-------------------------------l~-~------------------------------------- 181 (367)
T 1xhc_A 171 LIHRGAMF-------------------------------LG-L------------------------------------- 181 (367)
T ss_dssp EECSSSCC-------------------------------TT-C-------------------------------------
T ss_pred EEeCCCee-------------------------------cc-C-------------------------------------
Confidence 99998610 00 0
Q ss_pred CCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEE
Q 014198 161 SLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAV 239 (429)
Q Consensus 161 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~v 239 (429)
+..+.+.+.+.+ ++.|+++++++ |++++. + .|++.+|. +.+|.|
T Consensus 182 ---------------------------~~~~~~~l~~~l-~~~gV~i~~~~~v~~i~~--~----~v~~~~g~-i~~D~v 226 (367)
T 1xhc_A 182 ---------------------------DEELSNMIKDML-EETGVKFFLNSELLEANE--E----GVLTNSGF-IEGKVK 226 (367)
T ss_dssp ---------------------------CHHHHHHHHHHH-HHTTEEEECSCCEEEECS--S----EEEETTEE-EECSCE
T ss_pred ---------------------------CHHHHHHHHHHH-HHCCCEEEcCCEEEEEEe--e----EEEECCCE-EEcCEE
Confidence 012223666777 78899999999 999962 2 36676776 999999
Q ss_pred EEcCCCCchH
Q 014198 240 VLALGPWSGK 249 (429)
Q Consensus 240 V~a~G~~s~~ 249 (429)
|+|+|..++.
T Consensus 227 i~a~G~~p~~ 236 (367)
T 1xhc_A 227 ICAIGIVPNV 236 (367)
T ss_dssp EEECCEEECC
T ss_pred EECcCCCcCH
Confidence 9999976654
No 121
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.16 E-value=1.3e-11 Score=119.74 Aligned_cols=136 Identities=19% Similarity=0.293 Sum_probs=92.7
Q ss_pred ccccCCCCCCCcc--CcceEE-EeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcE
Q 014198 3 ATLLAPSSAPTYL--PGLRLT-LIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAV 79 (429)
Q Consensus 3 ~~~~a~g~~p~~~--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V 79 (429)
.+|||||++|..| ||.... ++..++..+...+.... . .....+|+|||+|.+|+.+|..|++.|.+|
T Consensus 143 ~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~--------~--~~~~~~vvViGgG~~g~e~A~~l~~~g~~V 212 (480)
T 3cgb_A 143 RLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERILKTL--------E--TNKVEDVTIIGGGAIGLEMAETFVELGKKV 212 (480)
T ss_dssp EEEECCCEEECCCCCBTTTSBTEECCSSHHHHHHHHHHH--------H--SSCCCEEEEECCHHHHHHHHHHHHHTTCEE
T ss_pred EEEECCCCcccCCCCCCccCCCEEEeCCHHHHHHHHHHh--------h--hcCCCeEEEECCCHHHHHHHHHHHhcCCeE
Confidence 5899999999876 454322 33332222111111000 0 013568999999999999999999999999
Q ss_pred EEEcCCC-CccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccc
Q 014198 80 TLIEKSS-VACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNK 158 (429)
Q Consensus 80 ~lie~~~-~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (429)
+++++.+ +.. .
T Consensus 213 tlv~~~~~~l~---------------------------------------~----------------------------- 224 (480)
T 3cgb_A 213 RMIERNDHIGT---------------------------------------I----------------------------- 224 (480)
T ss_dssp EEECCGGGTTS---------------------------------------S-----------------------------
T ss_pred EEEEeCCchhh---------------------------------------c-----------------------------
Confidence 9999876 110 0
Q ss_pred cCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcC
Q 014198 159 ANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESD 237 (429)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad 237 (429)
....+.+.+.+.+ ++.|+++++++ |+++..+ +++..+.+ ++.++.+|
T Consensus 225 ----------------------------~~~~~~~~l~~~l-~~~Gv~i~~~~~v~~i~~~--~~v~~v~~-~~~~i~~D 272 (480)
T 3cgb_A 225 ----------------------------YDGDMAEYIYKEA-DKHHIEILTNENVKAFKGN--ERVEAVET-DKGTYKAD 272 (480)
T ss_dssp ----------------------------SCHHHHHHHHHHH-HHTTCEEECSCCEEEEEES--SBEEEEEE-TTEEEECS
T ss_pred ----------------------------CCHHHHHHHHHHH-HHcCcEEEcCCEEEEEEcC--CcEEEEEE-CCCEEEcC
Confidence 0012333677777 78899999999 9999864 45555666 45689999
Q ss_pred EEEEcCCCCch
Q 014198 238 AVVLALGPWSG 248 (429)
Q Consensus 238 ~vV~a~G~~s~ 248 (429)
.||+|+|...+
T Consensus 273 ~vi~a~G~~p~ 283 (480)
T 3cgb_A 273 LVLVSVGVKPN 283 (480)
T ss_dssp EEEECSCEEES
T ss_pred EEEECcCCCcC
Confidence 99999997665
No 122
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.15 E-value=2.7e-09 Score=104.52 Aligned_cols=52 Identities=12% Similarity=0.064 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCC
Q 014198 189 QLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGP 245 (429)
Q Consensus 189 ~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~ 245 (429)
..+.++|.+.+ .+.|+++.+++ |++|..+ ++. +++.+|.++.||.||.+.-.
T Consensus 222 ~~l~~~l~~~l-~~~g~~i~~~~~V~~I~~~-~~~---v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 222 GGIWIAVANTL-PKEKTRFGEKGKVTKVNAN-NKT---VTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp HHHHHHHHHTS-CGGGEEESGGGCEEEEETT-TTE---EEETTSCEEEEEEEEECSCH
T ss_pred HHHHHHHHHHH-HhcCeeeecceEEEEEEcc-CCE---EEEcCCCEEECCEEEECCCH
Confidence 57888888888 88899999999 9999876 543 56778999999999988763
No 123
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.14 E-value=2.1e-11 Score=118.75 Aligned_cols=99 Identities=28% Similarity=0.410 Sum_probs=74.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDN 132 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 132 (429)
..+|+|||+|.+|+.+|..|++.|.+|+|+++.+.. +.. .
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~-------------------------------l~~------~--- 233 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTC-------------------------------LAG------Y--- 233 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST-------------------------------TTT------T---
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccch-------------------------------hhh------H---
Confidence 468999999999999999999999999999998610 000 0
Q ss_pred cCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-
Q 014198 133 YGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK- 211 (429)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~- 211 (429)
....+.+.+.+.+ ++.|+++++++
T Consensus 234 ------------------------------------------------------~~~~~~~~l~~~l-~~~GV~i~~~~~ 258 (490)
T 2bc0_A 234 ------------------------------------------------------YDRDLTDLMAKNM-EEHGIQLAFGET 258 (490)
T ss_dssp ------------------------------------------------------SCHHHHHHHHHHH-HTTTCEEEETCC
T ss_pred ------------------------------------------------------HHHHHHHHHHHHH-HhCCeEEEeCCE
Confidence 0012233666777 78899999999
Q ss_pred EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchH
Q 014198 212 VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGK 249 (429)
Q Consensus 212 v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~ 249 (429)
|+++.. ++++..+.+ ++.++.+|.||+|+|...+.
T Consensus 259 v~~i~~--~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~ 293 (490)
T 2bc0_A 259 VKEVAG--NGKVEKIIT-DKNEYDVDMVILAVGFRPNT 293 (490)
T ss_dssp EEEEEC--SSSCCEEEE-SSCEEECSEEEECCCEEECC
T ss_pred EEEEEc--CCcEEEEEE-CCcEEECCEEEECCCCCcCh
Confidence 999985 344444555 67889999999999976543
No 124
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.14 E-value=1.6e-11 Score=121.85 Aligned_cols=139 Identities=23% Similarity=0.396 Sum_probs=94.7
Q ss_pred ccccCCCCCCCcc--CcceEE-EeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcE
Q 014198 3 ATLLAPSSAPTYL--PGLRLT-LIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAV 79 (429)
Q Consensus 3 ~~~~a~g~~p~~~--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V 79 (429)
++|||||++|..| ||.... +++.+.+.....+.... ......+|+|||+|.+|+.+|..|++.|.+|
T Consensus 108 ~lviAtG~~p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~----------~~~~~~~vvViGgG~~g~e~A~~l~~~g~~V 177 (565)
T 3ntd_A 108 TLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDMDRILQTI----------QMNNVEHATVVGGGFIGLEMMESLHHLGIKT 177 (565)
T ss_dssp EEEECCCEEECCCCCTTCCSTTEECCSSHHHHHHHHHHH----------HHTTCSEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred EEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHH----------hhCCCCEEEEECCCHHHHHHHHHHHhcCCcE
Confidence 6899999999876 565332 33443332222111000 0012458999999999999999999999999
Q ss_pred EEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCcccc
Q 014198 80 TLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKA 159 (429)
Q Consensus 80 ~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (429)
+++++.+.. ...+
T Consensus 178 tlv~~~~~~-------------------------------l~~~------------------------------------ 190 (565)
T 3ntd_A 178 TLLELADQV-------------------------------MTPV------------------------------------ 190 (565)
T ss_dssp EEEESSSSS-------------------------------CTTS------------------------------------
T ss_pred EEEEcCCcc-------------------------------chhc------------------------------------
Confidence 999998610 0000
Q ss_pred CCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEc------------------cC
Q 014198 160 NSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVG------------------EG 220 (429)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~------------------~~ 220 (429)
...+.+.+.+.+ ++.|+++++++ |+++..+ ++
T Consensus 191 ----------------------------~~~~~~~l~~~l-~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ 241 (565)
T 3ntd_A 191 ----------------------------DREMAGFAHQAI-RDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIK 241 (565)
T ss_dssp ----------------------------CHHHHHHHHHHH-HHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTT
T ss_pred ----------------------------CHHHHHHHHHHH-HHCCCEEEeCCeEEEEeccccccccccccccccccccCC
Confidence 012233566667 78899999999 9999872 14
Q ss_pred CcEEEEEEeCCeEEEcCEEEEcCCCCch
Q 014198 221 GRVESVMIEGGRVVESDAVVLALGPWSG 248 (429)
Q Consensus 221 g~v~~v~~~~g~~i~ad~vV~a~G~~s~ 248 (429)
+++ .+.+.+|+++.+|.||+|+|...+
T Consensus 242 ~~~-~v~~~~g~~i~~D~vi~a~G~~p~ 268 (565)
T 3ntd_A 242 GHL-SLTLSNGELLETDLLIMAIGVRPE 268 (565)
T ss_dssp CEE-EEEETTSCEEEESEEEECSCEEEC
T ss_pred CcE-EEEEcCCCEEEcCEEEECcCCccc
Confidence 444 356677889999999999997765
No 125
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.14 E-value=3e-10 Score=103.71 Aligned_cols=114 Identities=16% Similarity=0.257 Sum_probs=80.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDN 132 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 132 (429)
++||+|||||++|+++|..|+++|++|+|||+.. + |......++ ..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~-g-G~~~~~~~~-----------------------------~~--- 46 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERF-G-GQILDTVDI-----------------------------EN--- 46 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSST-T-GGGGGCCEE-----------------------------CC---
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC-C-ceecccccc-----------------------------cc---
Confidence 3799999999999999999999999999998642 1 110000000 00
Q ss_pred cCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-
Q 014198 133 YGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK- 211 (429)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~- 211 (429)
.......++..+.+.+.+.+ ++.|++++.++
T Consensus 47 -----------------------------------------------~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~ 78 (310)
T 1fl2_A 47 -----------------------------------------------YISVPKTEGQKLAGALKVHV-DEYDVDVIDSQS 78 (310)
T ss_dssp -----------------------------------------------BTTBSSEEHHHHHHHHHHHH-HTSCEEEECSCC
T ss_pred -----------------------------------------------ccCcCCCCHHHHHHHHHHHH-HHcCCeEEccCE
Confidence 00001234556777888888 78899999998
Q ss_pred EEEEEEccC-CcEEEEEEeCCeEEEcCEEEEcCCCCch
Q 014198 212 VERVGVGEG-GRVESVMIEGGRVVESDAVVLALGPWSG 248 (429)
Q Consensus 212 v~~i~~~~~-g~v~~v~~~~g~~i~ad~vV~a~G~~s~ 248 (429)
|+.+..+.+ +..+.|.+.++.++.+|.+|+|+|.++.
T Consensus 79 v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~ 116 (310)
T 1fl2_A 79 ASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWR 116 (310)
T ss_dssp EEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred EEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcC
Confidence 999975422 2235577777778999999999998653
No 126
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.14 E-value=2.1e-09 Score=104.40 Aligned_cols=202 Identities=13% Similarity=0.109 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEE---eCCeEEEcCEEEEcCCCCchH-HH-hhh-------c
Q 014198 189 QLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMI---EGGRVVESDAVVLALGPWSGK-FE-LLA-------S 255 (429)
Q Consensus 189 ~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~---~~g~~i~ad~vV~a~G~~s~~-~~-~~~-------~ 255 (429)
..+.+.|.+.+ |++|++++ |++|..+ +++ +.|.+ .++++++||.||+|++++... ++ .+. .
T Consensus 238 ~~l~~~l~~~l----g~~i~~~~~V~~i~~~-~~~-~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll~~l~~~~~~~l~ 311 (478)
T 2ivd_A 238 QVLIDALAASL----GDAAHVGARVEGLARE-DGG-WRLIIEEHGRRAELSVAQVVLAAPAHATAKLLRPLDDALAALVA 311 (478)
T ss_dssp HHHHHHHHHHH----GGGEESSEEEEEEECC---C-CEEEEEETTEEEEEECSEEEECSCHHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHHHHh----hhhEEcCCEEEEEEec-CCe-EEEEEeecCCCceEEcCEEEECCCHHHHHHHhhccCHHHHHHHh
Confidence 45666666555 67999999 9999987 444 45776 567789999999999987543 22 110 0
Q ss_pred ccccccceeeEEEecCCCCCCC-CCceeEeeeccCCCCCCCCCCCceE-----e--cCCCcEEE---eccCCCCCCCCCC
Q 014198 256 MFRVSGLKAHSIILEPKEADAI-TPHALFLSYYPAQGEGGKPMDPEVY-----P--RPTGEVYL---CGMSSEQEVPDDP 324 (429)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~g~~~i---~g~~~~~~~~~~~ 324 (429)
.++..+...-.+.++.+. .+. .....+.. ..... .....++ + .++|..++ .++... ..
T Consensus 312 ~~~~~~~~~v~l~~~~~~-~~~~~~~~~~~~-~~~~~----~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~-----~~ 380 (478)
T 2ivd_A 312 GIAYAPIAVVHLGFDAGT-LPAPDGFGFLVP-AEEQR----RMLGAIHASTTFPFRAEGGRVLYSCMVGGARQ-----PG 380 (478)
T ss_dssp TCCBCCEEEEEEEECTTS-SCCCCSSEEECC-GGGCC----SCCEEEEHHHHCGGGBSTTCEEEEEEEECTTC-----GG
T ss_pred cCCCCcEEEEEEEEcccc-CCCCCceEEEec-CCCCC----ceEEEEEEcccCCCcCCCCCEEEEEEeCCcCC-----cc
Confidence 111222222223333321 011 11111110 00000 0001111 1 13343221 121111 00
Q ss_pred CCCCCCHHHHHHHHHHHHHhccccCcc-cccceeeeeecc-cCCCCCceecc----CCCCCcEEEEecC-CCccchhhHH
Q 014198 325 ETVSGDPASIQVLKRVARTVSSHLGEE-AQVKAEQACFLP-CTDDGVPVIGE----LPGIKGCYVGTGH-NCWGILNGPA 397 (429)
Q Consensus 325 ~~~~~~~~~~~~l~~~~~~~~p~l~~~-~~~~~~~~g~r~-~t~d~~p~ig~----~~~~~~~~~~~G~-~~~G~~~a~~ 397 (429)
.....+++..+.+++.+.+++|..... ......|.+-.| ++++....++. ....+|+|+++.+ .|.|+.-|..
T Consensus 381 ~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~~~~l~~aG~~~~g~gv~gA~~ 460 (478)
T 2ivd_A 381 LVEQDEDALAALAREELKALAGVTARPSFTRVFRWPLGIPQYNLGHLERVAAIDAALQRLPGLHLIGNAYKGVGLNDCIR 460 (478)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHCCCSCCSEEEEEEESSCCBCCBTTHHHHHHHHHHHHHTSTTEEECSTTTSCCSHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHhCCCCCCcEEEEEECCCcccCCCcCHHHHHHHHHHHHhhCCCEEEEccCCCCCCHHHHHH
Confidence 111234566788889999988864320 112345554443 33432221111 1114799999776 4678888888
Q ss_pred HHHHHHHHHh
Q 014198 398 TGAALAELVM 407 (429)
Q Consensus 398 ~a~~la~~i~ 407 (429)
.|..+|+.|+
T Consensus 461 SG~~aA~~i~ 470 (478)
T 2ivd_A 461 NAAQLADALV 470 (478)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHH
Confidence 9999999984
No 127
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.13 E-value=2.9e-11 Score=117.06 Aligned_cols=130 Identities=18% Similarity=0.270 Sum_probs=91.7
Q ss_pred cccccCCCCCCCcc--CcceEE-EeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCc
Q 014198 2 AATLLAPSSAPTYL--PGLRLT-LIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAA 78 (429)
Q Consensus 2 ~~~~~a~g~~p~~~--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~ 78 (429)
..+|||||++|..| ||.... +++..+.. ... ....+|+|||+|.+|+.+|..|++.|.+
T Consensus 140 d~lviAtGs~p~~p~i~G~~~~~~~~~~~~~------~~~------------~~~~~vvViGgG~~g~E~A~~l~~~g~~ 201 (467)
T 1zk7_A 140 DRCLVATGASPAVPPIPGLKESPYWTSTEAL------ASD------------TIPERLAVIGSSVVALELAQAFARLGSK 201 (467)
T ss_dssp SEEEECCCEEECCCCCTTTTTSCCBCHHHHH------HCS------------SCCSEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred CEEEEeCCCCCCCCCCCCCCcCceecHHHHh------ccc------------ccCCEEEEECCCHHHHHHHHHHHHcCCE
Confidence 36899999999876 454221 22222110 000 2246899999999999999999999999
Q ss_pred EEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccc
Q 014198 79 VTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNK 158 (429)
Q Consensus 79 V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (429)
|+++++.+. ++. +
T Consensus 202 Vtlv~~~~~-------------------------------~l~-~----------------------------------- 214 (467)
T 1zk7_A 202 VTVLARNTL-------------------------------FFR-E----------------------------------- 214 (467)
T ss_dssp EEEECSSCT-------------------------------TTT-S-----------------------------------
T ss_pred EEEEEECCc-------------------------------cCC-C-----------------------------------
Confidence 999999861 000 0
Q ss_pred cCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcC
Q 014198 159 ANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESD 237 (429)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad 237 (429)
+..+.+.+.+.+ ++.|+++++++ |+++..+ ++. ..|.++ +.++.+|
T Consensus 215 -----------------------------~~~~~~~l~~~l-~~~Gv~i~~~~~v~~i~~~-~~~-~~v~~~-~~~i~aD 261 (467)
T 1zk7_A 215 -----------------------------DPAIGEAVTAAF-RAEGIEVLEHTQASQVAHM-DGE-FVLTTT-HGELRAD 261 (467)
T ss_dssp -----------------------------CHHHHHHHHHHH-HHTTCEEETTCCEEEEEEE-TTE-EEEEET-TEEEEES
T ss_pred -----------------------------CHHHHHHHHHHH-HhCCCEEEcCCEEEEEEEe-CCE-EEEEEC-CcEEEcC
Confidence 012333677777 78899999999 9999875 443 346664 5689999
Q ss_pred EEEEcCCCCchH
Q 014198 238 AVVLALGPWSGK 249 (429)
Q Consensus 238 ~vV~a~G~~s~~ 249 (429)
.||+|+|.+++.
T Consensus 262 ~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 262 KLLVATGRTPNT 273 (467)
T ss_dssp EEEECSCEEESC
T ss_pred EEEECCCCCcCC
Confidence 999999987664
No 128
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.13 E-value=2.9e-11 Score=117.45 Aligned_cols=131 Identities=19% Similarity=0.199 Sum_probs=91.4
Q ss_pred ccccCCCCCCCccCcceEE--EeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcEE
Q 014198 3 ATLLAPSSAPTYLPGLRLT--LIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAVT 80 (429)
Q Consensus 3 ~~~~a~g~~p~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~ 80 (429)
.+|||||++|..||+.+.. +++..+... .. ....+++|||||.+|+.+|..|++.|.+|+
T Consensus 151 ~lViAtGs~p~~~~~i~~~~~v~~~~~~~~---------------~~---~~~~~vvViGgG~ig~E~A~~l~~~G~~Vt 212 (482)
T 1ojt_A 151 NCIIAAGSRVTKLPFIPEDPRIIDSSGALA---------------LK---EVPGKLLIIGGGIIGLEMGTVYSTLGSRLD 212 (482)
T ss_dssp EEEECCCEEECCCSSCCCCTTEECHHHHTT---------------CC---CCCSEEEEESCSHHHHHHHHHHHHHTCEEE
T ss_pred EEEECCCCCCCCCCCCCccCcEEcHHHHhc---------------cc---ccCCeEEEECCCHHHHHHHHHHHHcCCeEE
Confidence 5899999999887643211 222211100 00 224689999999999999999999999999
Q ss_pred EEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccccC
Q 014198 81 LIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKAN 160 (429)
Q Consensus 81 lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (429)
|+|+.+.. +..+
T Consensus 213 lv~~~~~~-------------------------------l~~~------------------------------------- 224 (482)
T 1ojt_A 213 VVEMMDGL-------------------------------MQGA------------------------------------- 224 (482)
T ss_dssp EECSSSSS-------------------------------STTS-------------------------------------
T ss_pred EEEECCcc-------------------------------cccc-------------------------------------
Confidence 99998610 0000
Q ss_pred CCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeC----CeEEE
Q 014198 161 SLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEG----GRVVE 235 (429)
Q Consensus 161 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~----g~~i~ 235 (429)
...+.+.+.+.+ ++.|+++++++ |++++.+ ++. ..|++.+ +.++.
T Consensus 225 ---------------------------~~~~~~~l~~~l-~~~gV~i~~~~~v~~i~~~-~~~-~~v~~~~~~~~g~~~~ 274 (482)
T 1ojt_A 225 ---------------------------DRDLVKVWQKQN-EYRFDNIMVNTKTVAVEPK-EDG-VYVTFEGANAPKEPQR 274 (482)
T ss_dssp ---------------------------CHHHHHHHHHHH-GGGEEEEECSCEEEEEEEE-TTE-EEEEEESSSCCSSCEE
T ss_pred ---------------------------CHHHHHHHHHHH-HhcCCEEEECCEEEEEEEc-CCe-EEEEEeccCCCceEEE
Confidence 012233566777 78899999999 9999876 433 3466666 66789
Q ss_pred cCEEEEcCCCCchH
Q 014198 236 SDAVVLALGPWSGK 249 (429)
Q Consensus 236 ad~vV~a~G~~s~~ 249 (429)
+|.||+|+|...+.
T Consensus 275 ~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 275 YDAVLVAAGRAPNG 288 (482)
T ss_dssp ESCEEECCCEEECG
T ss_pred cCEEEECcCCCcCC
Confidence 99999999976654
No 129
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.13 E-value=3.3e-10 Score=103.87 Aligned_cols=114 Identities=16% Similarity=0.219 Sum_probs=79.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGP 130 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 130 (429)
...+||+|||||++|+++|+.|+++|++|+|+|+..+++.... ...+ ..
T Consensus 14 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~-~~~~-----------------------------~~- 62 (319)
T 3cty_A 14 ERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGGLTAE-APLV-----------------------------EN- 62 (319)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTGGGGG-CSCB-----------------------------CC-
T ss_pred cCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCccccc-cchh-----------------------------hh-
Confidence 4468999999999999999999999999999999654321110 0000 00
Q ss_pred CCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEc
Q 014198 131 DNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIG 210 (429)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~ 210 (429)
+ +....++...+...+.+.+ ++.|++++..
T Consensus 63 ----~---------------------------------------------~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~ 92 (319)
T 3cty_A 63 ----Y---------------------------------------------LGFKSIVGSELAKLFADHA-ANYAKIREGV 92 (319)
T ss_dssp ----B---------------------------------------------TTBSSBCHHHHHHHHHHHH-HTTSEEEETC
T ss_pred ----c---------------------------------------------CCCcccCHHHHHHHHHHHH-HHcCCEEEEe
Confidence 0 0001133456667788888 7889999883
Q ss_pred eEEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCch
Q 014198 211 KVERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSG 248 (429)
Q Consensus 211 ~v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~ 248 (429)
.|++++.+ ++.+ .|.+ ++.++.+|.||+|+|.++.
T Consensus 93 ~v~~i~~~-~~~~-~v~~-~~~~~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 93 EVRSIKKT-QGGF-DIET-NDDTYHAKYVIITTGTTHK 127 (319)
T ss_dssp CEEEEEEE-TTEE-EEEE-SSSEEEEEEEEECCCEEEC
T ss_pred eEEEEEEe-CCEE-EEEE-CCCEEEeCEEEECCCCCcc
Confidence 39999876 4433 3555 5678999999999997654
No 130
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.13 E-value=3.7e-10 Score=108.63 Aligned_cols=61 Identities=18% Similarity=0.080 Sum_probs=47.2
Q ss_pred EehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeC---Ce---EEEcCEEEEcCCCCchH
Q 014198 186 VHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEG---GR---VVESDAVVLALGPWSGK 249 (429)
Q Consensus 186 ~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~---g~---~i~ad~vV~a~G~~s~~ 249 (429)
.....+.+.|.+.+ ++.+..+++++ |+++..+ ++. +.|++.+ |. ++.+|.||+|+|.++..
T Consensus 112 ~~~~~l~~~l~~~~-~~~~~~i~~~t~V~~v~~~-~~~-~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p 179 (447)
T 2gv8_A 112 PHRHTIQEYQRIYA-QPLLPFIKLATDVLDIEKK-DGS-WVVTYKGTKAGSPISKDIFDAVSICNGHYEVP 179 (447)
T ss_dssp CBHHHHHHHHHHHH-GGGGGGEECSEEEEEEEEE-TTE-EEEEEEESSTTCCEEEEEESEEEECCCSSSSB
T ss_pred CCHHHHHHHHHHHH-HHhhCeEEeCCEEEEEEeC-CCe-EEEEEeecCCCCeeEEEEeCEEEECCCCCCCC
Confidence 45567788888888 66688899999 9999876 444 4466654 55 79999999999997653
No 131
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.12 E-value=3.1e-10 Score=106.27 Aligned_cols=60 Identities=15% Similarity=0.253 Sum_probs=47.1
Q ss_pred eEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCch
Q 014198 185 QVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSG 248 (429)
Q Consensus 185 ~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~ 248 (429)
.+.+..+...+.+.+ ++.|+++++++ |+++..+ ++. +.|.+.++ ++.+|.||+|+|.++.
T Consensus 84 ~~~~~~~~~~l~~~~-~~~gv~i~~~~~v~~i~~~-~~~-~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 84 HISGETYAEYLQVVA-NHYELNIFENTVVTNISAD-DAY-YTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp SCBHHHHHHHHHHHH-HHTTCEEECSCCEEEEEEC-SSS-EEEEESSC-CEEEEEEEECCCSTTS
T ss_pred CCCHHHHHHHHHHHH-HHcCCeEEeCCEEEEEEEC-CCe-EEEEeCCC-EEEeCEEEECCCCCCc
Confidence 345667778888888 78899999999 9999976 433 34666555 6899999999999764
No 132
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.12 E-value=1.3e-11 Score=118.25 Aligned_cols=132 Identities=16% Similarity=0.273 Sum_probs=90.0
Q ss_pred ccccCCCCCCCcc--CcceEEEeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcEE
Q 014198 3 ATLLAPSSAPTYL--PGLRLTLIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAVT 80 (429)
Q Consensus 3 ~~~~a~g~~p~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~ 80 (429)
.+|||||++|..| ||.. ++..+.+.+...+.... ......+++|||||.+|+++|..|++.|.+|+
T Consensus 107 ~lVIATGs~p~~p~i~g~~--~~~~~~~~~~~~l~~~~----------~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vt 174 (437)
T 4eqs_A 107 KLILSPGASANSLGFESDI--TFTLRNLEDTDAIDQFI----------KANQVDKVLVVGAGYVSLEVLENLYERGLHPT 174 (437)
T ss_dssp EEEECCCEEECCCCCCCTT--EECCSSHHHHHHHHHHH----------HHHTCCEEEEECCSHHHHHHHHHHHHHTCEEE
T ss_pred EEEECCCCccccccccCce--EEeeccHHHHHHHHHhh----------hccCCcEEEEECCccchhhhHHHHHhcCCcce
Confidence 5899999999876 3433 22333332222211000 00124589999999999999999999999999
Q ss_pred EEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccccC
Q 014198 81 LIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKAN 160 (429)
Q Consensus 81 lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (429)
|+|+.+.. ...+.
T Consensus 175 lv~~~~~l-------------------------------l~~~d------------------------------------ 187 (437)
T 4eqs_A 175 LIHRSDKI-------------------------------NKLMD------------------------------------ 187 (437)
T ss_dssp EEESSSCC-------------------------------STTSC------------------------------------
T ss_pred eeeeeccc-------------------------------ccccc------------------------------------
Confidence 99998710 00000
Q ss_pred CCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEE
Q 014198 161 SLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAV 239 (429)
Q Consensus 161 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~v 239 (429)
..+.+.+.+.+ ++.|++++.++ |++++. . .+.+.+++++.+|.|
T Consensus 188 ----------------------------~~~~~~~~~~l-~~~gV~i~~~~~v~~~~~---~---~v~~~~g~~~~~D~v 232 (437)
T 4eqs_A 188 ----------------------------ADMNQPILDEL-DKREIPYRLNEEINAING---N---EITFKSGKVEHYDMI 232 (437)
T ss_dssp ----------------------------GGGGHHHHHHH-HHTTCCEEESCCEEEEET---T---EEEETTSCEEECSEE
T ss_pred ----------------------------chhHHHHHHHh-hccceEEEeccEEEEecC---C---eeeecCCeEEeeeeE
Confidence 01112566777 88899999999 998863 2 367778999999999
Q ss_pred EEcCCCCch
Q 014198 240 VLALGPWSG 248 (429)
Q Consensus 240 V~a~G~~s~ 248 (429)
|+|+|...+
T Consensus 233 l~a~G~~Pn 241 (437)
T 4eqs_A 233 IEGVGTHPN 241 (437)
T ss_dssp EECCCEEES
T ss_pred EEEeceecC
Confidence 999996554
No 133
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.12 E-value=5.9e-11 Score=115.24 Aligned_cols=129 Identities=22% Similarity=0.326 Sum_probs=90.9
Q ss_pred ccccCCCCCCCccCcceEE---EeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcE
Q 014198 3 ATLLAPSSAPTYLPGLRLT---LIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAV 79 (429)
Q Consensus 3 ~~~~a~g~~p~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V 79 (429)
.+|||||++|..+|+.... +++....... . ....+|+|||+|.+|+.+|..|++.|.+|
T Consensus 145 ~lvlAtG~~p~~~~~~~~~~~~v~~~~~~~~~---------------~---~~~~~v~ViGgG~~g~e~A~~l~~~g~~V 206 (476)
T 3lad_A 145 NVILASGSKPVEIPPAPVDQDVIVDSTGALDF---------------Q---NVPGKLGVIGAGVIGLELGSVWARLGAEV 206 (476)
T ss_dssp CEEECCCEEECCCTTSCCCSSSEEEHHHHTSC---------------S---SCCSEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred EEEEcCCCCCCCCCCCCCCcccEEechhhhcc---------------c---cCCCeEEEECCCHHHHHHHHHHHHcCCcE
Confidence 5899999999877654321 2222221110 0 23468999999999999999999999999
Q ss_pred EEEcCCC-CccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccc
Q 014198 80 TLIEKSS-VACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNK 158 (429)
Q Consensus 80 ~lie~~~-~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (429)
+++++.+ +.. .+
T Consensus 207 tlv~~~~~~l~--------------------------------~~----------------------------------- 219 (476)
T 3lad_A 207 TVLEAMDKFLP--------------------------------AV----------------------------------- 219 (476)
T ss_dssp EEEESSSSSST--------------------------------TS-----------------------------------
T ss_pred EEEecCCCcCc--------------------------------cc-----------------------------------
Confidence 9999986 110 00
Q ss_pred cCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCC---eEE
Q 014198 159 ANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGG---RVV 234 (429)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g---~~i 234 (429)
...+.+.+.+.+ ++.|++++.++ |++++.+ ++.+ .+.+.++ .++
T Consensus 220 -----------------------------~~~~~~~l~~~l-~~~Gv~v~~~~~v~~i~~~-~~~~-~v~~~~~~g~~~~ 267 (476)
T 3lad_A 220 -----------------------------DEQVAKEAQKIL-TKQGLKILLGARVTGTEVK-NKQV-TVKFVDAEGEKSQ 267 (476)
T ss_dssp -----------------------------CHHHHHHHHHHH-HHTTEEEEETCEEEEEEEC-SSCE-EEEEESSSEEEEE
T ss_pred -----------------------------CHHHHHHHHHHH-HhCCCEEEECCEEEEEEEc-CCEE-EEEEEeCCCcEEE
Confidence 012333666677 78899999999 9999876 4443 3555544 579
Q ss_pred EcCEEEEcCCCCch
Q 014198 235 ESDAVVLALGPWSG 248 (429)
Q Consensus 235 ~ad~vV~a~G~~s~ 248 (429)
.+|.||+|+|...+
T Consensus 268 ~~D~vi~a~G~~p~ 281 (476)
T 3lad_A 268 AFDKLIVAVGRRPV 281 (476)
T ss_dssp EESEEEECSCEEEC
T ss_pred ECCEEEEeeCCccc
Confidence 99999999996544
No 134
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.11 E-value=1.3e-11 Score=119.01 Aligned_cols=66 Identities=33% Similarity=0.425 Sum_probs=48.3
Q ss_pred ccccCCCCCCCccCcceEE--EeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcEE
Q 014198 3 ATLLAPSSAPTYLPGLRLT--LIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAVT 80 (429)
Q Consensus 3 ~~~~a~g~~p~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~ 80 (429)
.+|||||++|..||+.+.. +++..+... .. ....+|+|||||.+|+++|..|++.|.+|+
T Consensus 137 ~lviATGs~p~~~~~~~~~~~v~~~~~~~~---------------~~---~~~~~vvViGgG~~g~e~A~~l~~~g~~Vt 198 (458)
T 1lvl_A 137 HLLLATGSSSVELPMLPLGGPVISSTEALA---------------PK---ALPQHLVVVGGGYIGLELGIAYRKLGAQVS 198 (458)
T ss_dssp EEEECCCEEECCBTTBCCBTTEECHHHHTC---------------CS---SCCSEEEEECCSHHHHHHHHHHHHHTCEEE
T ss_pred EEEEeCCCCCCCCCCCCccCcEecHHHHhh---------------hh---ccCCeEEEECcCHHHHHHHHHHHHCCCeEE
Confidence 6899999999887754321 112111100 00 124689999999999999999999999999
Q ss_pred EEcCCC
Q 014198 81 LIEKSS 86 (429)
Q Consensus 81 lie~~~ 86 (429)
|+|+.+
T Consensus 199 lv~~~~ 204 (458)
T 1lvl_A 199 VVEARE 204 (458)
T ss_dssp EECSSS
T ss_pred EEEcCC
Confidence 999987
No 135
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.11 E-value=2.5e-10 Score=105.45 Aligned_cols=115 Identities=21% Similarity=0.281 Sum_probs=79.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGP 130 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 130 (429)
...+||+|||||++|+++|+.|++.|++|+|||+..+++.....+ . ...
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~------------~------------------~~~- 60 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTT------------D------------------VEN- 60 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSCSCGGGSCS------------C------------------BCC-
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCceeccc------------h------------------hhh-
Confidence 456899999999999999999999999999999865332110000 0 000
Q ss_pred CCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEc
Q 014198 131 DNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIG 210 (429)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~ 210 (429)
.. .....+....+...+.+.+ .+.|++++.+
T Consensus 61 ---------------------------------------------~~---~~~~~~~~~~~~~~l~~~~-~~~~v~~~~~ 91 (335)
T 2a87_A 61 ---------------------------------------------YP---GFRNGITGPELMDEMREQA-LRFGADLRME 91 (335)
T ss_dssp ---------------------------------------------ST---TCTTCBCHHHHHHHHHHHH-HHTTCEEECC
T ss_pred ---------------------------------------------cC---CCCCCCCHHHHHHHHHHHH-HHcCCEEEEe
Confidence 00 0001134556777888888 7789999988
Q ss_pred eEEEEEEccCCcEEEE-EEeCCeEEEcCEEEEcCCCCch
Q 014198 211 KVERVGVGEGGRVESV-MIEGGRVVESDAVVLALGPWSG 248 (429)
Q Consensus 211 ~v~~i~~~~~g~v~~v-~~~~g~~i~ad~vV~a~G~~s~ 248 (429)
+|++++.+ +. +.| .+.++.++.+|.||+|+|..+.
T Consensus 92 ~v~~i~~~-~~--~~v~~~~~g~~~~~d~lviAtG~~~~ 127 (335)
T 2a87_A 92 DVESVSLH-GP--LKSVVTADGQTHRARAVILAMGAAAR 127 (335)
T ss_dssp CEEEEECS-SS--SEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred eEEEEEeC-Cc--EEEEEeCCCCEEEeCEEEECCCCCcc
Confidence 88888762 32 235 6667778999999999998654
No 136
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.10 E-value=4.8e-11 Score=115.33 Aligned_cols=130 Identities=23% Similarity=0.359 Sum_probs=93.0
Q ss_pred ccccCCCCCCC-cc--CcceEEEeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcE
Q 014198 3 ATLLAPSSAPT-YL--PGLRLTLIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAV 79 (429)
Q Consensus 3 ~~~~a~g~~p~-~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V 79 (429)
.+|||||++|. .| ||... +++........ ....+++|||+|..|+.+|..|++.|.+|
T Consensus 136 ~lviAtG~~p~~~p~i~G~~~-~~~~~~~~~~~------------------~~~~~v~ViGgG~~g~e~A~~l~~~g~~V 196 (463)
T 4dna_A 136 RIVIAVGGHPSPHDALPGHEL-CITSNEAFDLP------------------ALPESILIAGGGYIAVEFANIFHGLGVKT 196 (463)
T ss_dssp EEEECCCEEECCCTTSTTGGG-CBCHHHHTTCS------------------SCCSEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred EEEEecCCCcccCCCCCCccc-cccHHHHhhhh------------------cCCCeEEEECCCHHHHHHHHHHHHcCCeE
Confidence 58999999998 65 55432 22222111100 23468999999999999999999999999
Q ss_pred EEEcCCC-CccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccc
Q 014198 80 TLIEKSS-VACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNK 158 (429)
Q Consensus 80 ~lie~~~-~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (429)
+++++.+ +.. .+
T Consensus 197 t~v~~~~~~l~--------------------------------~~----------------------------------- 209 (463)
T 4dna_A 197 TLIYRGKEILS--------------------------------RF----------------------------------- 209 (463)
T ss_dssp EEECSSSSSST--------------------------------TS-----------------------------------
T ss_pred EEEEcCCcccc--------------------------------cc-----------------------------------
Confidence 9999986 110 00
Q ss_pred cCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEE-EeCCeEEEc
Q 014198 159 ANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVM-IEGGRVVES 236 (429)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~-~~~g~~i~a 236 (429)
...+.+.+.+.+ ++.|++++.++ |+++..++++. ..|. +.+|+ +.+
T Consensus 210 -----------------------------~~~~~~~l~~~l-~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~~g~-i~a 257 (463)
T 4dna_A 210 -----------------------------DQDMRRGLHAAM-EEKGIRILCEDIIQSVSADADGR-RVATTMKHGE-IVA 257 (463)
T ss_dssp -----------------------------CHHHHHHHHHHH-HHTTCEEECSCCEEEEEECTTSC-EEEEESSSCE-EEE
T ss_pred -----------------------------CHHHHHHHHHHH-HHCCCEEECCCEEEEEEEcCCCE-EEEEEcCCCe-EEe
Confidence 012333677777 88899999999 99998863443 4577 77776 999
Q ss_pred CEEEEcCCCCchHH
Q 014198 237 DAVVLALGPWSGKF 250 (429)
Q Consensus 237 d~vV~a~G~~s~~~ 250 (429)
|.||+|+|..++..
T Consensus 258 D~Vv~a~G~~p~~~ 271 (463)
T 4dna_A 258 DQVMLALGRMPNTN 271 (463)
T ss_dssp SEEEECSCEEESCT
T ss_pred CEEEEeeCcccCCC
Confidence 99999999866543
No 137
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.09 E-value=6.3e-11 Score=115.41 Aligned_cols=130 Identities=22% Similarity=0.362 Sum_probs=91.1
Q ss_pred ccccCCCCCCCccCcce--EE---EeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCC
Q 014198 3 ATLLAPSSAPTYLPGLR--LT---LIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGA 77 (429)
Q Consensus 3 ~~~~a~g~~p~~~~g~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~ 77 (429)
.+|||||++|..+||.. +. +++...... .. ....+|+|||||.+|+.+|..|++.|.
T Consensus 161 ~lViATGs~p~~ipg~~~~~~~~~~~~~~~~~~---------------~~---~~~~~vvViGgG~~g~E~A~~l~~~g~ 222 (491)
T 3urh_A 161 NVVIATGSDVAGIPGVEVAFDEKTIVSSTGALA---------------LE---KVPASMIVVGGGVIGLELGSVWARLGA 222 (491)
T ss_dssp EEEECCCEECCCBTTBCCCCCSSSEECHHHHTS---------------CS---SCCSEEEEECCSHHHHHHHHHHHHHTC
T ss_pred EEEEccCCCCCCCCCcccccCCeeEEehhHhhh---------------hh---hcCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 68999999997778764 11 222211110 00 234689999999999999999999999
Q ss_pred cEEEEcCCC-CccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCc
Q 014198 78 AVTLIEKSS-VACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPS 156 (429)
Q Consensus 78 ~V~lie~~~-~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (429)
+|+++++.+ +.. .
T Consensus 223 ~Vtlv~~~~~~l~--------------------------------~---------------------------------- 236 (491)
T 3urh_A 223 KVTVVEFLDTILG--------------------------------G---------------------------------- 236 (491)
T ss_dssp EEEEECSSSSSSS--------------------------------S----------------------------------
T ss_pred EEEEEeccccccc--------------------------------c----------------------------------
Confidence 999999886 110 0
Q ss_pred cccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeC---C-
Q 014198 157 NKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEG---G- 231 (429)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~---g- 231 (429)
....+.+.+.+.+ ++.|++++.++ |++++.+ ++.+ .+.+.+ |
T Consensus 237 ------------------------------~d~~~~~~l~~~l-~~~gV~v~~~~~v~~i~~~-~~~~-~v~~~~~~~g~ 283 (491)
T 3urh_A 237 ------------------------------MDGEVAKQLQRML-TKQGIDFKLGAKVTGAVKS-GDGA-KVTFEPVKGGE 283 (491)
T ss_dssp ------------------------------SCHHHHHHHHHHH-HHTTCEEECSEEEEEEEEE-TTEE-EEEEEETTSCC
T ss_pred ------------------------------CCHHHHHHHHHHH-HhCCCEEEECCeEEEEEEe-CCEE-EEEEEecCCCc
Confidence 0012333566677 77899999999 9999876 4443 355542 4
Q ss_pred -eEEEcCEEEEcCCCCchH
Q 014198 232 -RVVESDAVVLALGPWSGK 249 (429)
Q Consensus 232 -~~i~ad~vV~a~G~~s~~ 249 (429)
.++.+|.||+|+|...+.
T Consensus 284 ~~~i~~D~Vi~a~G~~p~~ 302 (491)
T 3urh_A 284 ATTLDAEVVLIATGRKPST 302 (491)
T ss_dssp CEEEEESEEEECCCCEECC
T ss_pred eEEEEcCEEEEeeCCccCC
Confidence 589999999999976543
No 138
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.09 E-value=4.3e-11 Score=116.39 Aligned_cols=54 Identities=30% Similarity=0.475 Sum_probs=44.1
Q ss_pred HHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchH
Q 014198 193 KTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGK 249 (429)
Q Consensus 193 ~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~ 249 (429)
+.+.+.+ ++.|+++++++ |+++..+ ++.+ .|++.+|.++.+|.||+|+|..++.
T Consensus 230 ~~~~~~l-~~~GV~v~~~~~V~~i~~~-~~~~-~v~l~dG~~i~aD~Vv~a~G~~pn~ 284 (493)
T 1m6i_A 230 NWTMEKV-RREGVKVMPNAIVQSVGVS-SGKL-LIKLKDGRKVETDHIVAAVGLEPNV 284 (493)
T ss_dssp HHHHHHH-HTTTCEEECSCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECCCEEECC
T ss_pred HHHHHHH-HhcCCEEEeCCEEEEEEec-CCeE-EEEECCCCEEECCEEEECCCCCccH
Confidence 3666677 78899999999 9999875 5544 5778888899999999999977654
No 139
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.09 E-value=8.2e-10 Score=100.90 Aligned_cols=39 Identities=18% Similarity=0.327 Sum_probs=35.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCcc
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVAC 89 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~ 89 (429)
+.+|||+|||||++|+++|..|+++|++|+|||++.+++
T Consensus 4 e~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG 42 (312)
T 4gcm_A 4 EIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGG 42 (312)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTG
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCC
Confidence 347999999999999999999999999999999987543
No 140
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.09 E-value=7.1e-11 Score=114.24 Aligned_cols=130 Identities=22% Similarity=0.369 Sum_probs=89.5
Q ss_pred ccccCCCCCCCccCcceEE--EeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcEE
Q 014198 3 ATLLAPSSAPTYLPGLRLT--LIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAVT 80 (429)
Q Consensus 3 ~~~~a~g~~p~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~ 80 (429)
.+|+|||++|..||..... +++..+... .. ....+|+|||||.+|+.+|..|++.|.+|+
T Consensus 137 ~lViAtG~~~~~~~~~g~~~~~~~~~~~~~---------------~~---~~~~~vvViGgG~~g~E~A~~l~~~g~~Vt 198 (464)
T 2a8x_A 137 NAIIATGSSTRLVPGTSLSANVVTYEEQIL---------------SR---ELPKSIIIAGAGAIGMEFGYVLKNYGVDVT 198 (464)
T ss_dssp EEEECCCEEECCCTTCCCBTTEECHHHHHT---------------CS---SCCSEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred EEEECCCCCCCCCCCCCCCceEEecHHHhh---------------cc---ccCCeEEEECCcHHHHHHHHHHHHcCCeEE
Confidence 5899999999877432211 222211100 00 124689999999999999999999999999
Q ss_pred EEcCCC-CccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCcccc
Q 014198 81 LIEKSS-VACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKA 159 (429)
Q Consensus 81 lie~~~-~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (429)
|+++.+ +.. .+
T Consensus 199 lv~~~~~~l~--------------------------------~~------------------------------------ 210 (464)
T 2a8x_A 199 IVEFLPRALP--------------------------------NE------------------------------------ 210 (464)
T ss_dssp EECSSSSSST--------------------------------TS------------------------------------
T ss_pred EEEcCCcccc--------------------------------cc------------------------------------
Confidence 999986 110 00
Q ss_pred CCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEe-CC--eEEE
Q 014198 160 NSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIE-GG--RVVE 235 (429)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~-~g--~~i~ 235 (429)
...+.+.+.+.+ ++.|++++.++ |+++..+ ++.+ .+.+. +| .++.
T Consensus 211 ----------------------------~~~~~~~l~~~l-~~~gv~i~~~~~v~~i~~~-~~~~-~v~~~~~g~~~~~~ 259 (464)
T 2a8x_A 211 ----------------------------DADVSKEIEKQF-KKLGVTILTATKVESIADG-GSQV-TVTVTKDGVAQELK 259 (464)
T ss_dssp ----------------------------CHHHHHHHHHHH-HHHTCEEECSCEEEEEEEC-SSCE-EEEEESSSCEEEEE
T ss_pred ----------------------------CHHHHHHHHHHH-HHcCCEEEeCcEEEEEEEc-CCeE-EEEEEcCCceEEEE
Confidence 012223566667 77899999999 9999876 4443 35554 55 6799
Q ss_pred cCEEEEcCCCCchH
Q 014198 236 SDAVVLALGPWSGK 249 (429)
Q Consensus 236 ad~vV~a~G~~s~~ 249 (429)
+|.||+|+|..++.
T Consensus 260 ~D~vv~a~G~~p~~ 273 (464)
T 2a8x_A 260 AEKVLQAIGFAPNV 273 (464)
T ss_dssp ESEEEECSCEEECC
T ss_pred cCEEEECCCCCccC
Confidence 99999999976543
No 141
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.08 E-value=8.3e-11 Score=114.32 Aligned_cols=130 Identities=22% Similarity=0.312 Sum_probs=92.6
Q ss_pred ccccCCCCCCC-cc--CcceEEEeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcE
Q 014198 3 ATLLAPSSAPT-YL--PGLRLTLIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAV 79 (429)
Q Consensus 3 ~~~~a~g~~p~-~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V 79 (429)
.+|||||++|. .| ||... +.+...+.. +. ....+++|||+|.+|+.+|..|++.|.+|
T Consensus 157 ~lviAtG~~p~~~p~i~G~~~-~~~~~~~~~---~~---------------~~~~~v~ViGgG~~g~e~A~~l~~~g~~V 217 (484)
T 3o0h_A 157 KILIATGAKIVSNSAIKGSDL-CLTSNEIFD---LE---------------KLPKSIVIVGGGYIGVEFANIFHGLGVKT 217 (484)
T ss_dssp EEEECCCEEECCC--CBTGGG-SBCTTTGGG---CS---------------SCCSEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred EEEEccCCCcccCCCCCCccc-cccHHHHHh---HH---------------hcCCcEEEECcCHHHHHHHHHHHHcCCeE
Confidence 58999999998 55 45432 222211110 00 23468999999999999999999999999
Q ss_pred EEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCcccc
Q 014198 80 TLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKA 159 (429)
Q Consensus 80 ~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (429)
+++++.+.. +..+
T Consensus 218 tli~~~~~~-------------------------------l~~~------------------------------------ 230 (484)
T 3o0h_A 218 TLLHRGDLI-------------------------------LRNF------------------------------------ 230 (484)
T ss_dssp EEECSSSSS-------------------------------STTS------------------------------------
T ss_pred EEEECCCcc-------------------------------cccc------------------------------------
Confidence 999998610 0000
Q ss_pred CCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCE
Q 014198 160 NSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDA 238 (429)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~ 238 (429)
...+.+.+.+.+ ++.|++++.++ |++++.+ ++.+ .|.+.+|.++.+|.
T Consensus 231 ----------------------------~~~~~~~l~~~l-~~~Gv~i~~~~~V~~i~~~-~~~v-~v~~~~g~~i~aD~ 279 (484)
T 3o0h_A 231 ----------------------------DYDLRQLLNDAM-VAKGISIIYEATVSQVQST-ENCY-NVVLTNGQTICADR 279 (484)
T ss_dssp ----------------------------CHHHHHHHHHHH-HHHTCEEESSCCEEEEEEC-SSSE-EEEETTSCEEEESE
T ss_pred ----------------------------CHHHHHHHHHHH-HHCCCEEEeCCEEEEEEee-CCEE-EEEECCCcEEEcCE
Confidence 012333667777 77899999999 9999886 5554 57887888999999
Q ss_pred EEEcCCCCchH
Q 014198 239 VVLALGPWSGK 249 (429)
Q Consensus 239 vV~a~G~~s~~ 249 (429)
||+|+|..++.
T Consensus 280 Vi~A~G~~p~~ 290 (484)
T 3o0h_A 280 VMLATGRVPNT 290 (484)
T ss_dssp EEECCCEEECC
T ss_pred EEEeeCCCcCC
Confidence 99999976554
No 142
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.08 E-value=4.5e-11 Score=115.13 Aligned_cols=137 Identities=20% Similarity=0.276 Sum_probs=90.7
Q ss_pred ccccCCCCCCCcc--CcceEE-EeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcE
Q 014198 3 ATLLAPSSAPTYL--PGLRLT-LIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAV 79 (429)
Q Consensus 3 ~~~~a~g~~p~~~--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V 79 (429)
.+|||||++|..| ||.... +++.+.......+.... . .....+++|||+|.+|+.+|..|++.|.+|
T Consensus 105 ~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~-------~---~~~~~~vvViGgG~~g~E~A~~l~~~g~~V 174 (449)
T 3kd9_A 105 YLVFANGASPQVPAIEGVNLKGVFTADLPPDALAIREYM-------E---KYKVENVVIIGGGYIGIEMAEAFAAQGKNV 174 (449)
T ss_dssp EEEECCCEEECCCSCBTTTSTTEECSCSTHHHHHHHHHH-------S---SSCCCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred EEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHH-------H---hcCCCeEEEECCCHHHHHHHHHHHhCCCeE
Confidence 6899999999876 465432 33333222111111000 0 012458999999999999999999999999
Q ss_pred EEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCcccc
Q 014198 80 TLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKA 159 (429)
Q Consensus 80 ~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (429)
+++++.+.. ... .
T Consensus 175 tlv~~~~~~-------------------------------l~~------~------------------------------ 187 (449)
T 3kd9_A 175 TMIVRGERV-------------------------------LRR------S------------------------------ 187 (449)
T ss_dssp EEEESSSST-------------------------------TTT------T------------------------------
T ss_pred EEEEcCCcc-------------------------------chh------h------------------------------
Confidence 999998610 000 0
Q ss_pred CCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCE
Q 014198 160 NSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDA 238 (429)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~ 238 (429)
....+.+.+.+.+ ++. ++++.++ |+++..+ + ++..+. .++.++.+|.
T Consensus 188 ---------------------------~~~~~~~~l~~~l-~~~-v~i~~~~~v~~i~~~-~-~v~~v~-~~g~~i~~D~ 235 (449)
T 3kd9_A 188 ---------------------------FDKEVTDILEEKL-KKH-VNLRLQEITMKIEGE-E-RVEKVV-TDAGEYKAEL 235 (449)
T ss_dssp ---------------------------SCHHHHHHHHHHH-TTT-SEEEESCCEEEEECS-S-SCCEEE-ETTEEEECSE
T ss_pred ---------------------------cCHHHHHHHHHHH-HhC-cEEEeCCeEEEEecc-C-cEEEEE-eCCCEEECCE
Confidence 0012233666666 777 9999999 9999865 3 444343 4678999999
Q ss_pred EEEcCCCCch
Q 014198 239 VVLALGPWSG 248 (429)
Q Consensus 239 vV~a~G~~s~ 248 (429)
||+|+|...+
T Consensus 236 Vv~a~G~~p~ 245 (449)
T 3kd9_A 236 VILATGIKPN 245 (449)
T ss_dssp EEECSCEEEC
T ss_pred EEEeeCCccC
Confidence 9999997655
No 143
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.08 E-value=4.1e-10 Score=103.30 Aligned_cols=113 Identities=14% Similarity=0.235 Sum_probs=78.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDN 132 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 132 (429)
.+||+|||||++|+++|+.|+++|++|+|+|+..+++...... ....
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~------------------------------~~~~--- 51 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTT------------------------------EVEN--- 51 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSSTTGGGGGCS------------------------------BCCC---
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCCCceEecch------------------------------hhhh---
Confidence 5799999999999999999999999999999765432110000 0000
Q ss_pred cCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEceE
Q 014198 133 YGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGKV 212 (429)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~v 212 (429)
.. .....+.+..+...+.+.+ .+.|++++.++|
T Consensus 52 -------------------------------------------~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v 84 (320)
T 1trb_A 52 -------------------------------------------WP---GDPNDLTGPLLMERMHEHA-TKFETEIIFDHI 84 (320)
T ss_dssp -------------------------------------------ST---TCCSSCBHHHHHHHHHHHH-HHTTCEEECCCE
T ss_pred -------------------------------------------CC---CCCCCCCHHHHHHHHHHHH-HHCCCEEEEeee
Confidence 00 0001134456677787777 788999998888
Q ss_pred EEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCch
Q 014198 213 ERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSG 248 (429)
Q Consensus 213 ~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~ 248 (429)
+.++.+ ++.+ .+ +.++..+.+|.||+|+|..+.
T Consensus 85 ~~i~~~-~~~~-~v-~~~~~~~~~~~lv~AtG~~~~ 117 (320)
T 1trb_A 85 NKVDLQ-NRPF-RL-NGDNGEYTCDALIIATGASAR 117 (320)
T ss_dssp EEEECS-SSSE-EE-EESSCEEEEEEEEECCCEEEC
T ss_pred eEEEec-CCEE-EE-EeCCCEEEcCEEEECCCCCcC
Confidence 888765 4443 34 567788999999999997643
No 144
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.08 E-value=4.2e-10 Score=107.38 Aligned_cols=57 Identities=12% Similarity=0.084 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCC
Q 014198 189 QLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPW 246 (429)
Q Consensus 189 ~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~ 246 (429)
..+.++|.+.+ ++.|++|++++ |++|..++++++++|++.+|++++||.||.++|.+
T Consensus 256 ~~L~~aL~r~~-~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMC-AINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHH-HHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHH-HHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 67889999999 88999999999 99999833788899999888889999999999987
No 145
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.07 E-value=8.3e-11 Score=113.89 Aligned_cols=66 Identities=32% Similarity=0.467 Sum_probs=48.0
Q ss_pred ccccCCCCCCCccC--cceEE-EeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcE
Q 014198 3 ATLLAPSSAPTYLP--GLRLT-LIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAV 79 (429)
Q Consensus 3 ~~~~a~g~~p~~~~--g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V 79 (429)
.+|||||++|..|| |.... +++..+... + . ....+++|||+|.+|+.+|..|++.|.+|
T Consensus 139 ~lviAtG~~p~~p~~~g~~~~~v~t~~~~~~---~------------~---~~~~~vvViGgG~~g~E~A~~l~~~g~~V 200 (468)
T 2qae_A 139 KTIIATGSEPTELPFLPFDEKVVLSSTGALA---L------------P---RVPKTMVVIGGGVIGLELGSVWARLGAEV 200 (468)
T ss_dssp EEEECCCEEECCBTTBCCCSSSEECHHHHHT---C------------S---SCCSEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred EEEECCCCCcCCCCCCCCCcCceechHHHhh---c------------c---cCCceEEEECCCHHHHHHHHHHHHhCCEE
Confidence 58999999998774 43221 222222110 0 0 22468999999999999999999999999
Q ss_pred EEEcCCC
Q 014198 80 TLIEKSS 86 (429)
Q Consensus 80 ~lie~~~ 86 (429)
+++++.+
T Consensus 201 tlv~~~~ 207 (468)
T 2qae_A 201 TVVEFAP 207 (468)
T ss_dssp EEECSSS
T ss_pred EEEecCC
Confidence 9999986
No 146
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.07 E-value=4.2e-11 Score=116.09 Aligned_cols=130 Identities=22% Similarity=0.363 Sum_probs=89.9
Q ss_pred ccccCCCCCCCccC--cceE-EEeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcE
Q 014198 3 ATLLAPSSAPTYLP--GLRL-TLIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAV 79 (429)
Q Consensus 3 ~~~~a~g~~p~~~~--g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V 79 (429)
.+|+|||++|..|| |... .+++..+... .. ....+|+|||+|.+|+.+|..|++.|.+|
T Consensus 142 ~lIiAtGs~p~~p~~~g~~~~~v~~~~~~~~---------------~~---~~~~~vvViGgG~~g~e~A~~l~~~g~~V 203 (470)
T 1dxl_A 142 HIIIATGSDVKSLPGVTIDEKKIVSSTGALA---------------LS---EIPKKLVVIGAGYIGLEMGSVWGRIGSEV 203 (470)
T ss_dssp EEEECCCEEECCBTTBCCCSSSEECHHHHTT---------------CS---SCCSEEEESCCSHHHHHHHHHHHHHTCEE
T ss_pred EEEECCCCCCCCCCCCCCCcccEEeHHHhhh---------------hh---hcCCeEEEECCCHHHHHHHHHHHHcCCcE
Confidence 58999999998774 4321 1222222110 00 22468999999999999999999999999
Q ss_pred EEEcCCC-CccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccc
Q 014198 80 TLIEKSS-VACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNK 158 (429)
Q Consensus 80 ~lie~~~-~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (429)
+|+++.+ +.. .+
T Consensus 204 tli~~~~~~l~--------------------------------~~----------------------------------- 216 (470)
T 1dxl_A 204 TVVEFASEIVP--------------------------------TM----------------------------------- 216 (470)
T ss_dssp EEECSSSSSST--------------------------------TS-----------------------------------
T ss_pred EEEEcCCcccc--------------------------------cc-----------------------------------
Confidence 9999986 110 00
Q ss_pred cCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEe---CC--e
Q 014198 159 ANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIE---GG--R 232 (429)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~---~g--~ 232 (429)
...+.+.+.+.+ ++.|++++.++ |+++..+ ++.+ .+.+. +| .
T Consensus 217 -----------------------------~~~~~~~l~~~l-~~~gv~i~~~~~v~~i~~~-~~~~-~v~~~~~~~g~~~ 264 (470)
T 1dxl_A 217 -----------------------------DAEIRKQFQRSL-EKQGMKFKLKTKVVGVDTS-GDGV-KLTVEPSAGGEQT 264 (470)
T ss_dssp -----------------------------CHHHHHHHHHHH-HHSSCCEECSEEEEEEECS-SSSE-EEEEEESSSCCCE
T ss_pred -----------------------------cHHHHHHHHHHH-HHcCCEEEeCCEEEEEEEc-CCeE-EEEEEecCCCcce
Confidence 012233666777 78899999999 9999866 4333 35543 34 6
Q ss_pred EEEcCEEEEcCCCCchH
Q 014198 233 VVESDAVVLALGPWSGK 249 (429)
Q Consensus 233 ~i~ad~vV~a~G~~s~~ 249 (429)
++.+|.||+|+|..++.
T Consensus 265 ~~~~D~vv~a~G~~p~~ 281 (470)
T 1dxl_A 265 IIEADVVLVSAGRTPFT 281 (470)
T ss_dssp EEEESEEECCCCEEECC
T ss_pred EEECCEEEECCCCCcCC
Confidence 89999999999976553
No 147
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.06 E-value=4.7e-10 Score=103.54 Aligned_cols=59 Identities=17% Similarity=0.316 Sum_probs=46.8
Q ss_pred EehHHHHHHHHHHHHhhcCcEEEEceEEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCch
Q 014198 186 VHPQLFTKTLLNKAVNDYGLEVVIGKVERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSG 248 (429)
Q Consensus 186 ~~~~~l~~~l~~~~~~~~Gv~v~~~~v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~ 248 (429)
+++..+...+.+.+ .+.|++++.++|+++..+ ++. +.|.+ ++.++++|.||+|+|.++.
T Consensus 67 ~~~~~~~~~l~~~~-~~~gv~~~~~~v~~i~~~-~~~-~~v~~-~~~~~~~~~vv~A~G~~~~ 125 (333)
T 1vdc_A 67 ILGVELTDKFRKQS-ERFGTTIFTETVTKVDFS-SKP-FKLFT-DSKAILADAVILAIGAVAK 125 (333)
T ss_dssp EEHHHHHHHHHHHH-HHTTCEEECCCCCEEECS-SSS-EEEEC-SSEEEEEEEEEECCCEEEC
T ss_pred CCHHHHHHHHHHHH-HHCCCEEEEeEEEEEEEc-CCE-EEEEE-CCcEEEcCEEEECCCCCcC
Confidence 56677888888888 788999998888888865 443 34666 6788999999999998754
No 148
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.06 E-value=9.1e-11 Score=114.04 Aligned_cols=130 Identities=23% Similarity=0.243 Sum_probs=89.9
Q ss_pred ccccCCCCCCCcc--CcceEEEeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcEE
Q 014198 3 ATLLAPSSAPTYL--PGLRLTLIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAVT 80 (429)
Q Consensus 3 ~~~~a~g~~p~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~ 80 (429)
.+|||||++|..| ||.....++..++... . ....+++|||+|.+|+.+|..|++.|.+|+
T Consensus 153 ~lviATGs~p~~p~i~G~~~~~~~~~~~~~~---------------~---~~~~~vvViGgG~~g~E~A~~l~~~g~~Vt 214 (483)
T 3dgh_A 153 TFVIAVGGRPRYPDIPGAVEYGITSDDLFSL---------------D---REPGKTLVVGAGYIGLECAGFLKGLGYEPT 214 (483)
T ss_dssp EEEECCCEEECCCSSTTHHHHCBCHHHHTTC---------------S---SCCCEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred EEEEeCCCCcCCCCCCCcccccCcHHHHhhh---------------h---hcCCcEEEECCCHHHHHHHHHHHHcCCEEE
Confidence 5899999999876 5653222222221110 0 224579999999999999999999999999
Q ss_pred EEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccccC
Q 014198 81 LIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKAN 160 (429)
Q Consensus 81 lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (429)
++++..+... +
T Consensus 215 lv~~~~~l~~--------------------------------~------------------------------------- 225 (483)
T 3dgh_A 215 VMVRSIVLRG--------------------------------F------------------------------------- 225 (483)
T ss_dssp EEESSCSSTT--------------------------------S-------------------------------------
T ss_pred EEeCCCCCcc--------------------------------c-------------------------------------
Confidence 9998542100 0
Q ss_pred CCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCe-----EE
Q 014198 161 SLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGR-----VV 234 (429)
Q Consensus 161 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~-----~i 234 (429)
...+.+.+.+.+ ++.|++++.++ |+++..++++.+ .|++.++. ++
T Consensus 226 ---------------------------d~~~~~~l~~~l-~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~ 276 (483)
T 3dgh_A 226 ---------------------------DQQMAELVAASM-EERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESED 276 (483)
T ss_dssp ---------------------------CHHHHHHHHHHH-HHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEE
T ss_pred ---------------------------CHHHHHHHHHHH-HhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEE
Confidence 012223566677 78899999999 999987634443 36655543 78
Q ss_pred EcCEEEEcCCCCch
Q 014198 235 ESDAVVLALGPWSG 248 (429)
Q Consensus 235 ~ad~vV~a~G~~s~ 248 (429)
.+|.||+|+|...+
T Consensus 277 ~~D~vi~a~G~~p~ 290 (483)
T 3dgh_A 277 VYDTVLWAIGRKGL 290 (483)
T ss_dssp EESEEEECSCEEEC
T ss_pred EcCEEEECcccccC
Confidence 99999999996544
No 149
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.05 E-value=8.3e-10 Score=106.48 Aligned_cols=65 Identities=17% Similarity=0.237 Sum_probs=48.9
Q ss_pred eEehHHHHHHHHHHHHhhcCcE--EEEce-EEEEEEccCCcEEEEEEeC---C--eEEEcCEEEEcCCCCchHH
Q 014198 185 QVHPQLFTKTLLNKAVNDYGLE--VVIGK-VERVGVGEGGRVESVMIEG---G--RVVESDAVVLALGPWSGKF 250 (429)
Q Consensus 185 ~~~~~~l~~~l~~~~~~~~Gv~--v~~~~-v~~i~~~~~g~v~~v~~~~---g--~~i~ad~vV~a~G~~s~~~ 250 (429)
.+....+.+.+.+.+ ++.|++ +++++ |+++..++++..+.|++.+ | .++.+|.||+|+|.++...
T Consensus 97 ~~~~~~l~~~l~~~~-~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~s~p~ 169 (464)
T 2xve_A 97 YPPREVLWDYIKGRV-EKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGHFSTPY 169 (464)
T ss_dssp SCBHHHHHHHHHHHH-HHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECCCSSSSBC
T ss_pred CCCHHHHHHHHHHHH-HHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECCCCCCCCc
Confidence 356678888888888 777988 99999 9999876333234566654 3 5789999999999766543
No 150
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.05 E-value=1.6e-10 Score=112.17 Aligned_cols=131 Identities=22% Similarity=0.283 Sum_probs=89.9
Q ss_pred ccccCCCCCCCcc-----CcceEEEeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCC
Q 014198 3 ATLLAPSSAPTYL-----PGLRLTLIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGA 77 (429)
Q Consensus 3 ~~~~a~g~~p~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~ 77 (429)
.+|||||++|..| ||... +.+...+.. +. ....+++|||+|.+|+.+|..|++.|.
T Consensus 151 ~lviAtG~~p~~p~~~~i~G~~~-~~~~~~~~~---~~---------------~~~~~vvViGgG~~g~E~A~~l~~~g~ 211 (478)
T 3dk9_A 151 HILIATGGMPSTPHESQIPGASL-GITSDGFFQ---LE---------------ELPGRSVIVGAGYIAVEMAGILSALGS 211 (478)
T ss_dssp CEEECCCEEECCCCTTTSTTGGG-SBCHHHHTT---CC---------------SCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EEEEccCCCCCCCCcCCCCCCce-eEchHHhhc---hh---------------hcCccEEEECCCHHHHHHHHHHHHcCC
Confidence 5899999999876 44431 111111100 00 224689999999999999999999999
Q ss_pred cEEEEcCCC-CccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCc
Q 014198 78 AVTLIEKSS-VACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPS 156 (429)
Q Consensus 78 ~V~lie~~~-~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (429)
+|+++++.+ +. ..+
T Consensus 212 ~Vtlv~~~~~~l--------------------------------~~~--------------------------------- 226 (478)
T 3dk9_A 212 KTSLMIRHDKVL--------------------------------RSF--------------------------------- 226 (478)
T ss_dssp EEEEECSSSSSC--------------------------------TTS---------------------------------
T ss_pred eEEEEEeCCccc--------------------------------ccc---------------------------------
Confidence 999999976 11 000
Q ss_pred cccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeC-----
Q 014198 157 NKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEG----- 230 (429)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~----- 230 (429)
...+.+.+.+.+ ++.|++++.++ |++++.++++....+.+.+
T Consensus 227 -------------------------------d~~~~~~~~~~l-~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~ 274 (478)
T 3dk9_A 227 -------------------------------DSMISTNCTEEL-ENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLP 274 (478)
T ss_dssp -------------------------------CHHHHHHHHHHH-HHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCC
T ss_pred -------------------------------CHHHHHHHHHHH-HHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCc
Confidence 012223566667 78899999999 9999876345223466654
Q ss_pred --CeEEEcCEEEEcCCCCchH
Q 014198 231 --GRVVESDAVVLALGPWSGK 249 (429)
Q Consensus 231 --g~~i~ad~vV~a~G~~s~~ 249 (429)
+.++.+|.||+|+|...+.
T Consensus 275 ~~g~~~~~D~vi~a~G~~p~~ 295 (478)
T 3dk9_A 275 VMTMIPDVDCLLWAIGRVPNT 295 (478)
T ss_dssp EEEEEEEESEEEECSCEEESC
T ss_pred ccceEEEcCEEEEeeccccCC
Confidence 2578999999999965543
No 151
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.04 E-value=1.4e-10 Score=112.74 Aligned_cols=129 Identities=22% Similarity=0.211 Sum_probs=89.6
Q ss_pred ccccCCCCCCCccC--cc-eEEEeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcE
Q 014198 3 ATLLAPSSAPTYLP--GL-RLTLIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAV 79 (429)
Q Consensus 3 ~~~~a~g~~p~~~~--g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V 79 (429)
.+|||||++|..|+ +. ...+++........ ....+|+|||+|.+|+.+|..|++.|.+|
T Consensus 139 ~lViATGs~p~~p~~~~~~~~~v~t~~~~~~~~------------------~~~k~vvViGgG~ig~E~A~~l~~~g~~V 200 (492)
T 3ic9_A 139 RIVIATGSRPNYPEFLAAAGSRLLTNDNLFELN------------------DLPKSVAVFGPGVIGLELGQALSRLGVIV 200 (492)
T ss_dssp EEEECCCEECCCCHHHHTTGGGEECHHHHTTCS------------------SCCSEEEEESSCHHHHHHHHHHHHTTCEE
T ss_pred EEEEccCCCCcCCCCCCccCCcEEcHHHHhhhh------------------hcCCeEEEECCCHHHHHHHHHHHHcCCeE
Confidence 58999999998874 21 11133332221100 23468999999999999999999999999
Q ss_pred EEEcCCC-CccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCccc
Q 014198 80 TLIEKSS-VACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNK 158 (429)
Q Consensus 80 ~lie~~~-~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (429)
+++++.+ +.. .
T Consensus 201 tlv~~~~~~l~--------------------------------~------------------------------------ 212 (492)
T 3ic9_A 201 KVFGRSGSVAN--------------------------------L------------------------------------ 212 (492)
T ss_dssp EEECCTTCCTT--------------------------------C------------------------------------
T ss_pred EEEEECCcccc--------------------------------c------------------------------------
Confidence 9999987 110 0
Q ss_pred cCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEe--CC--eE
Q 014198 159 ANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIE--GG--RV 233 (429)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~--~g--~~ 233 (429)
....+.+.+.+.+ ++. ++++.++ |++++.+ ++.+. +.+. +| .+
T Consensus 213 ----------------------------~d~~~~~~l~~~l-~~~-V~i~~~~~v~~i~~~-~~~v~-v~~~~~~G~~~~ 260 (492)
T 3ic9_A 213 ----------------------------QDEEMKRYAEKTF-NEE-FYFDAKARVISTIEK-EDAVE-VIYFDKSGQKTT 260 (492)
T ss_dssp ----------------------------CCHHHHHHHHHHH-HTT-SEEETTCEEEEEEEC-SSSEE-EEEECTTCCEEE
T ss_pred ----------------------------CCHHHHHHHHHHH-hhC-cEEEECCEEEEEEEc-CCEEE-EEEEeCCCceEE
Confidence 0012233566666 666 9999999 9999877 55543 5554 56 68
Q ss_pred EEcCEEEEcCCCCchH
Q 014198 234 VESDAVVLALGPWSGK 249 (429)
Q Consensus 234 i~ad~vV~a~G~~s~~ 249 (429)
+.+|.||+|+|...+.
T Consensus 261 i~~D~Vi~a~G~~p~~ 276 (492)
T 3ic9_A 261 ESFQYVLAATGRKANV 276 (492)
T ss_dssp EEESEEEECSCCEESC
T ss_pred EECCEEEEeeCCccCC
Confidence 9999999999976543
No 152
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.04 E-value=5.9e-11 Score=118.32 Aligned_cols=136 Identities=26% Similarity=0.431 Sum_probs=93.7
Q ss_pred ccccCCCCCCCcc--Ccc-eEE-EeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCc
Q 014198 3 ATLLAPSSAPTYL--PGL-RLT-LIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAA 78 (429)
Q Consensus 3 ~~~~a~g~~p~~~--~g~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~ 78 (429)
.+|||||++|..| ||. ... +++.+.+.+...+.... . .....+++|||+|.+|+.+|..|++.|.+
T Consensus 143 ~lviAtG~~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l--------~--~~~~~~vvViGgG~~g~e~A~~l~~~g~~ 212 (588)
T 3ics_A 143 VLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYI--------D--EKKPRHATVIGGGFIGVEMVENLRERGIE 212 (588)
T ss_dssp EEEECCCEEECCCCCTTTTTCTTEEECSSHHHHHHHHHHH--------H--HHCCSEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred EEEECCCCCCCCCCCCCcccCCCeEEeCCHHHHHHHHHHH--------h--hcCCCeEEEECCCHHHHHHHHHHHhCCCe
Confidence 5899999999876 565 222 33443332221110000 0 01246899999999999999999999999
Q ss_pred EEEEcCCC-CccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCcc
Q 014198 79 VTLIEKSS-VACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSN 157 (429)
Q Consensus 79 V~lie~~~-~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (429)
|+++++.+ +.. .
T Consensus 213 Vtlv~~~~~~l~--------------------------------~----------------------------------- 225 (588)
T 3ics_A 213 VTLVEMANQVMP--------------------------------P----------------------------------- 225 (588)
T ss_dssp EEEECSSSSSCT--------------------------------T-----------------------------------
T ss_pred EEEEecCCcccc--------------------------------c-----------------------------------
Confidence 99999876 110 0
Q ss_pred ccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEc
Q 014198 158 KANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVES 236 (429)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~a 236 (429)
....+.+.+.+.+ ++.|++++.++ |++++.+ ++ .|.+.+|.++.+
T Consensus 226 -----------------------------~~~~~~~~l~~~l-~~~GV~i~~~~~v~~i~~~-~~---~v~~~~g~~i~~ 271 (588)
T 3ics_A 226 -----------------------------IDYEMAAYVHEHM-KNHDVELVFEDGVDALEEN-GA---VVRLKSGSVIQT 271 (588)
T ss_dssp -----------------------------SCHHHHHHHHHHH-HHTTCEEECSCCEEEEEGG-GT---EEEETTSCEEEC
T ss_pred -----------------------------CCHHHHHHHHHHH-HHcCCEEEECCeEEEEecC-CC---EEEECCCCEEEc
Confidence 0012233666777 78899999999 9999865 33 366778889999
Q ss_pred CEEEEcCCCCchH
Q 014198 237 DAVVLALGPWSGK 249 (429)
Q Consensus 237 d~vV~a~G~~s~~ 249 (429)
|.||+|+|..++.
T Consensus 272 D~Vi~a~G~~p~~ 284 (588)
T 3ics_A 272 DMLILAIGVQPES 284 (588)
T ss_dssp SEEEECSCEEECC
T ss_pred CEEEEccCCCCCh
Confidence 9999999976654
No 153
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.03 E-value=1.4e-09 Score=106.38 Aligned_cols=116 Identities=17% Similarity=0.267 Sum_probs=81.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGP 130 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 130 (429)
...+||+|||||++|+++|+.|+++|++|+|+|+.. ++ ...... +..
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~-GG-~~~~~~-------------------------------~~~ 256 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERF-GG-QVLDTV-------------------------------DIE 256 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSST-TG-GGTTCS-------------------------------CBC
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCC-CC-cccccc-------------------------------ccc
Confidence 346899999999999999999999999999998742 21 100000 000
Q ss_pred CCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEc
Q 014198 131 DNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIG 210 (429)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~ 210 (429)
. . .......+..+...+.+.+ ++.|++++.+
T Consensus 257 -~-------------------------------------------~----~~~~~~~~~~l~~~l~~~~-~~~gv~v~~~ 287 (521)
T 1hyu_A 257 -N-------------------------------------------Y----ISVPKTEGQKLAGALKAHV-SDYDVDVIDS 287 (521)
T ss_dssp -C-------------------------------------------B----TTBSSBCHHHHHHHHHHHH-HTSCEEEECS
T ss_pred -c-------------------------------------------c----CCCCCCCHHHHHHHHHHHH-HHcCCEEEcC
Confidence 0 0 0001124456777888888 8889999999
Q ss_pred e-EEEEEEcc-CCcEEEEEEeCCeEEEcCEEEEcCCCCch
Q 014198 211 K-VERVGVGE-GGRVESVMIEGGRVVESDAVVLALGPWSG 248 (429)
Q Consensus 211 ~-v~~i~~~~-~g~v~~v~~~~g~~i~ad~vV~a~G~~s~ 248 (429)
+ |+++..+. ++..+.|.+.+|.++++|.||+|+|.++.
T Consensus 288 ~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 288 QSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWR 327 (521)
T ss_dssp CCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred CEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcC
Confidence 8 99997531 12235577777889999999999998654
No 154
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.00 E-value=6.6e-12 Score=118.06 Aligned_cols=71 Identities=15% Similarity=0.243 Sum_probs=52.0
Q ss_pred ccccCCCCCCCcc--CcceEEEeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcEE
Q 014198 3 ATLLAPSSAPTYL--PGLRLTLIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAVT 80 (429)
Q Consensus 3 ~~~~a~g~~p~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~ 80 (429)
.+|||||++|..| ||.. .++..++..+...+.... ....+|+|||+|.+|+.+|..|++.|.+|+
T Consensus 107 ~lvlAtG~~p~~p~i~G~~-~v~~~~~~~d~~~l~~~l------------~~~~~vvVIGgG~~g~E~A~~l~~~g~~Vt 173 (385)
T 3klj_A 107 KLIIASGSIANKIKVPHAD-EIFSLYSYDDALKIKDEC------------KNKGKAFIIGGGILGIELAQAIIDSGTPAS 173 (385)
T ss_dssp EEEECCCEEECCCCCTTCS-CEECCSSHHHHHHHHHHH------------HHHSCEEEECCSHHHHHHHHHHHHHTCCEE
T ss_pred EEEEecCCCcCCCCCCCCC-CeEEeCCHHHHHHHHHHh------------hcCCeEEEECCCHHHHHHHHHHHhCCCeEE
Confidence 6899999999876 5654 344444433322221110 114589999999999999999999999999
Q ss_pred EEcCCC
Q 014198 81 LIEKSS 86 (429)
Q Consensus 81 lie~~~ 86 (429)
|+|+.+
T Consensus 174 vv~~~~ 179 (385)
T 3klj_A 174 IGIILE 179 (385)
T ss_dssp EECSSS
T ss_pred EEEcCC
Confidence 999987
No 155
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.00 E-value=1.8e-09 Score=103.33 Aligned_cols=39 Identities=31% Similarity=0.388 Sum_probs=34.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC-Cccccc
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS-VACAAS 92 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~-~~~~~s 92 (429)
+||+|||||++|+++|+.|+++|++|+|||+++ +++.+.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 41 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAY 41 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeec
Confidence 699999999999999999999999999999976 555443
No 156
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.99 E-value=1.7e-09 Score=98.79 Aligned_cols=112 Identities=17% Similarity=0.285 Sum_probs=76.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEE-EcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTL-IEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGP 130 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~l-ie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 130 (429)
.++||+|||||++|+++|+.|+++|++|+| +||..+++.... .. .+ ..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~~gG~~~~-~~-~~----------------------------~~- 51 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGGQITS-SS-EI----------------------------EN- 51 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSSTTGGGGG-CS-CB----------------------------CC-
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCCCCceeee-ec-ee----------------------------cc-
Confidence 468999999999999999999999999999 999554321100 00 00 00
Q ss_pred CCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEc
Q 014198 131 DNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIG 210 (429)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~ 210 (429)
+......+.+..+...+.+.+ ++.|++++.+
T Consensus 52 ------------------------------------------------~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~ 82 (315)
T 3r9u_A 52 ------------------------------------------------YPGVAQVMDGISFMAPWSEQC-MRFGLKHEMV 82 (315)
T ss_dssp ------------------------------------------------STTCCSCBCHHHHHHHHHHHH-TTTCCEEECC
T ss_pred ------------------------------------------------CCCCCCCCCHHHHHHHHHHHH-HHcCcEEEEE
Confidence 000011235567777888888 8889999988
Q ss_pred eEEEEEEccC--CcEEEE-EEeCCeEEEcCEEEEcCCCCc
Q 014198 211 KVERVGVGEG--GRVESV-MIEGGRVVESDAVVLALGPWS 247 (429)
Q Consensus 211 ~v~~i~~~~~--g~v~~v-~~~~g~~i~ad~vV~a~G~~s 247 (429)
+|+++ .+ + +.+ .+ ...++ ++.+|.+|+|+|...
T Consensus 83 ~v~~i-~~-~~~~~~-~v~~~~~~-~~~~d~lvlAtG~~~ 118 (315)
T 3r9u_A 83 GVEQI-LK-NSDGSF-TIKLEGGK-TELAKAVIVCTGSAP 118 (315)
T ss_dssp CEEEE-EE-CTTSCE-EEEETTSC-EEEEEEEEECCCEEE
T ss_pred EEEEE-ec-CCCCcE-EEEEecCC-EEEeCEEEEeeCCCC
Confidence 88888 55 3 333 33 22234 899999999999743
No 157
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.98 E-value=1.1e-09 Score=100.28 Aligned_cols=98 Identities=21% Similarity=0.321 Sum_probs=75.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDN 132 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 132 (429)
..+|+|||+|.+|+.+|..|++.|.+|+++++..... .
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---------------------------------------~--- 182 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR---------------------------------------A--- 182 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC---------------------------------------C---
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc---------------------------------------c---
Confidence 4689999999999999999999999999999876100 0
Q ss_pred cCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-
Q 014198 133 YGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK- 211 (429)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~- 211 (429)
...+.+.+.+.+ ++.|+++++++
T Consensus 183 -------------------------------------------------------~~~~~~~l~~~l-~~~gv~i~~~~~ 206 (320)
T 1trb_A 183 -------------------------------------------------------EKILIKRLMDKV-ENGNIILHTNRT 206 (320)
T ss_dssp -------------------------------------------------------CHHHHHHHHHHH-HTSSEEEECSCE
T ss_pred -------------------------------------------------------CHHHHHHHHHhc-ccCCeEEEcCce
Confidence 001222566666 77899999999
Q ss_pred EEEEEEccCCcEEEEEEeC----C--eEEEcCEEEEcCCCCchH
Q 014198 212 VERVGVGEGGRVESVMIEG----G--RVVESDAVVLALGPWSGK 249 (429)
Q Consensus 212 v~~i~~~~~g~v~~v~~~~----g--~~i~ad~vV~a~G~~s~~ 249 (429)
|+++..+ ++++.+|.+.+ | .++.+|.||+|+|...+.
T Consensus 207 v~~i~~~-~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~ 249 (320)
T 1trb_A 207 LEEVTGD-QMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNT 249 (320)
T ss_dssp EEEEEEC-SSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESC
T ss_pred eEEEEcC-CCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCCh
Confidence 9999876 55676677754 4 579999999999976543
No 158
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.98 E-value=4.1e-10 Score=109.52 Aligned_cols=130 Identities=19% Similarity=0.206 Sum_probs=88.0
Q ss_pred ccccCCCCCCCccC---cceEEEeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcE
Q 014198 3 ATLLAPSSAPTYLP---GLRLTLIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAV 79 (429)
Q Consensus 3 ~~~~a~g~~p~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V 79 (429)
.+|||||++|..|+ |.....++..++... . ....+++|||+|.+|+.+|..|++.|.+|
T Consensus 150 ~lViATGs~p~~p~~i~G~~~~~~~~~~~~~~---------------~---~~~~~vvViGgG~ig~E~A~~l~~~g~~V 211 (488)
T 3dgz_A 150 HIVIATGGRPRYPTQVKGALEYGITSDDIFWL---------------K---ESPGKTLVVGASYVALECAGFLTGIGLDT 211 (488)
T ss_dssp EEEECCCEEECCCSSCBTHHHHCBCHHHHTTC---------------S---SCCCSEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred EEEEcCCCCCCCCCCCCCcccccCcHHHHHhh---------------h---hcCCeEEEECCCHHHHHHHHHHHHcCCce
Confidence 58999999998764 432212222221110 0 22457999999999999999999999999
Q ss_pred EEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCCcCeeeeeeeEEeecccccCCCCCcccc
Q 014198 80 TLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDNYGYRALTTLSLTVTESQQSGSKPSNKA 159 (429)
Q Consensus 80 ~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (429)
+++++..+... +
T Consensus 212 tlv~~~~~l~~--------------------------------~------------------------------------ 223 (488)
T 3dgz_A 212 TVMMRSIPLRG--------------------------------F------------------------------------ 223 (488)
T ss_dssp EEEESSCSSTT--------------------------------S------------------------------------
T ss_pred EEEEcCccccc--------------------------------C------------------------------------
Confidence 99998651100 0
Q ss_pred CCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeC---Ce--E
Q 014198 160 NSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEG---GR--V 233 (429)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~---g~--~ 233 (429)
...+.+.+.+.+ ++.|++++.++ ++++...+++.+ .+.+.+ ++ +
T Consensus 224 ----------------------------d~~~~~~l~~~l-~~~gv~~~~~~~v~~i~~~~~~~~-~v~~~~~~~g~~~~ 273 (488)
T 3dgz_A 224 ----------------------------DQQMSSLVTEHM-ESHGTQFLKGCVPSHIKKLPTNQL-QVTWEDHASGKEDT 273 (488)
T ss_dssp ----------------------------CHHHHHHHHHHH-HHTTCEEEETEEEEEEEECTTSCE-EEEEEETTTTEEEE
T ss_pred ----------------------------CHHHHHHHHHHH-HHCCCEEEeCCEEEEEEEcCCCcE-EEEEEeCCCCeeEE
Confidence 012223566677 78899999999 999987534443 355443 44 4
Q ss_pred EEcCEEEEcCCCCch
Q 014198 234 VESDAVVLALGPWSG 248 (429)
Q Consensus 234 i~ad~vV~a~G~~s~ 248 (429)
+.+|.||+|+|...+
T Consensus 274 ~~~D~vi~a~G~~p~ 288 (488)
T 3dgz_A 274 GTFDTVLWAIGRVPE 288 (488)
T ss_dssp EEESEEEECSCEEES
T ss_pred EECCEEEEcccCCcc
Confidence 789999999996544
No 159
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.97 E-value=4e-10 Score=110.32 Aligned_cols=66 Identities=30% Similarity=0.365 Sum_probs=47.6
Q ss_pred ccccCCCCCCCcc--CcceEEEeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcEE
Q 014198 3 ATLLAPSSAPTYL--PGLRLTLIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAVT 80 (429)
Q Consensus 3 ~~~~a~g~~p~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~ 80 (429)
.+|||||++|..| ||....+++..++.... ....+++|||+|.+|+.+|..|++.|.+|+
T Consensus 176 ~lViATGs~p~~p~i~G~~~~~~t~~~~~~l~------------------~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vt 237 (519)
T 3qfa_A 176 RFLIATGERPRYLGIPGDKEYCISSDDLFSLP------------------YCPGKTLVVGASYVALECAGFLAGIGLDVT 237 (519)
T ss_dssp EEEECCCEEECCCCCTTHHHHCBCHHHHTTCS------------------SCCCSEEEECCSHHHHHHHHHHHHTTCCEE
T ss_pred EEEEECCCCcCCCCCCCccCceEcHHHHhhhh------------------hcCCeEEEECCcHHHHHHHHHHHHcCCeEE
Confidence 5899999999876 55432222222211100 223469999999999999999999999999
Q ss_pred EEcCCC
Q 014198 81 LIEKSS 86 (429)
Q Consensus 81 lie~~~ 86 (429)
++++..
T Consensus 238 lv~~~~ 243 (519)
T 3qfa_A 238 VMVRSI 243 (519)
T ss_dssp EEESSC
T ss_pred EEeccc
Confidence 999854
No 160
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.96 E-value=1.3e-08 Score=97.99 Aligned_cols=60 Identities=13% Similarity=0.136 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHhhcCcEEEEce-EEEEEEcc-CCcEEEEEEeCCeEEEcCEEEEcCCCCchHH
Q 014198 189 QLFTKTLLNKAVNDYGLEVVIGK-VERVGVGE-GGRVESVMIEGGRVVESDAVVLALGPWSGKF 250 (429)
Q Consensus 189 ~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~-~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~ 250 (429)
..+.++|.+.+ ++.|++|++++ |++|..+. ++++.+|.+ +++++.||.||+|+|.|+..+
T Consensus 242 ~~l~~al~~~~-~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~~l 303 (453)
T 2bcg_G 242 GELPQGFARLS-AIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPEKC 303 (453)
T ss_dssp THHHHHHHHHH-HHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGGGE
T ss_pred HHHHHHHHHHH-HHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccchhh
Confidence 47889999999 88899999999 99998752 466777777 588899999999999997654
No 161
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.94 E-value=1.4e-10 Score=112.67 Aligned_cols=56 Identities=13% Similarity=0.133 Sum_probs=40.1
Q ss_pred HHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCC----eEEEcCEEEEcCCCCchHHH
Q 014198 193 KTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGG----RVVESDAVVLALGPWSGKFE 251 (429)
Q Consensus 193 ~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g----~~i~ad~vV~a~G~~s~~~~ 251 (429)
+.+.+.+ ++.||++++++ |++++. ++.+..+...+| ++|.+|.||.|+|...+.+.
T Consensus 276 ~~~~~~L-~~~GV~v~~~~~v~~v~~--~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~ 336 (502)
T 4g6h_A 276 SYAQSHL-ENTSIKVHLRTAVAKVEE--KQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVI 336 (502)
T ss_dssp HHHHHHH-HHTTCEEETTEEEEEECS--SEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHH
T ss_pred HHHHHHH-HhcceeeecCceEEEEeC--CceEEEEEecCcccceeeeccCEEEEccCCcCCHHH
Confidence 3667777 88899999999 999963 332233333444 46999999999997665443
No 162
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.94 E-value=3.6e-09 Score=102.72 Aligned_cols=35 Identities=31% Similarity=0.500 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.++||+|||||++|+++|..|++.|++|+|||+..
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~ 39 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYK 39 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 35899999999999999999999999999999965
No 163
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.91 E-value=8.2e-09 Score=99.74 Aligned_cols=58 Identities=24% Similarity=0.237 Sum_probs=42.8
Q ss_pred hHHHHHHHHHHHHhhcCcEEEEce-EEEEEEcc-CCcEE--EEEEeCCe----EEEcCEEEEcCCCC
Q 014198 188 PQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGE-GGRVE--SVMIEGGR----VVESDAVVLALGPW 246 (429)
Q Consensus 188 ~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~-~g~v~--~v~~~~g~----~i~ad~vV~a~G~~ 246 (429)
...+.+.+...+ ++.++++++++ |++++.++ +++.+ .|.+.++. ++.+|.||+|+|..
T Consensus 126 ~~~~~~~l~~~~-~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~ 191 (463)
T 3s5w_A 126 RMEFNDYLRWVA-SHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGGT 191 (463)
T ss_dssp HHHHHHHHHHHH-TTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCCE
T ss_pred HHHHHHHHHHHH-HHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCCC
Confidence 345666777776 77789999999 99998652 24433 46666654 89999999999973
No 164
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.91 E-value=1.3e-08 Score=98.40 Aligned_cols=37 Identities=35% Similarity=0.488 Sum_probs=34.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCc
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVA 88 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~ 88 (429)
..+||+|||||++|+++|+.|++.|++|+|||++.+|
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~G 39 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGTIG 39 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 4689999999999999999999999999999998654
No 165
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.89 E-value=1.3e-08 Score=95.12 Aligned_cols=105 Identities=23% Similarity=0.317 Sum_probs=72.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHH-HHHHHhCCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHR-SLAEELNGPD 131 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~ 131 (429)
..+|+|||+|.+|+.+|..|++.|.+|+++++.+ .+.. .+..+..
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~-------------------------------~~~~~~~d~~~~--- 211 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTT-------------------------------GLNDPDADPSVR--- 211 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC-----------------------------------------CTTS---
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCC-------------------------------CCCCCCCCCCcc---
Confidence 3589999999999999999999999999999976 1110 0000000
Q ss_pred CcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcC-cEEEEc
Q 014198 132 NYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYG-LEVVIG 210 (429)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~G-v~v~~~ 210 (429)
-+..+.+.+.+.+ ++.| ++++.+
T Consensus 212 -------------------------------------------------------~~~~~~~~l~~~l-~~~g~v~~~~~ 235 (369)
T 3d1c_A 212 -------------------------------------------------------LSPYTRQRLGNVI-KQGARIEMNVH 235 (369)
T ss_dssp -------------------------------------------------------CCHHHHHHHHHHH-HTTCCEEEECS
T ss_pred -------------------------------------------------------CCHHHHHHHHHHH-hhCCcEEEecC
Confidence 0122334666666 7776 999999
Q ss_pred e-EEEEEEccCCcEEEEEEeCCeEEE-cCEEEEcCCCCchH
Q 014198 211 K-VERVGVGEGGRVESVMIEGGRVVE-SDAVVLALGPWSGK 249 (429)
Q Consensus 211 ~-v~~i~~~~~g~v~~v~~~~g~~i~-ad~vV~a~G~~s~~ 249 (429)
+ |+++..+ ++. ..|++.+|..+. +|.||+|+|...+.
T Consensus 236 ~~v~~i~~~-~~~-~~v~~~~g~~~~~~d~vi~a~G~~~~~ 274 (369)
T 3d1c_A 236 YTVKDIDFN-NGQ-YHISFDSGQSVHTPHEPILATGFDATK 274 (369)
T ss_dssp CCEEEEEEE-TTE-EEEEESSSCCEEESSCCEECCCBCGGG
T ss_pred cEEEEEEec-CCc-eEEEecCCeEeccCCceEEeeccCCcc
Confidence 9 9999765 443 346777787665 69999999987665
No 166
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.88 E-value=8.1e-10 Score=106.78 Aligned_cols=69 Identities=20% Similarity=0.325 Sum_probs=48.7
Q ss_pred ccccCCCCCCCcc--CcceEEEeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcEE
Q 014198 3 ATLLAPSSAPTYL--PGLRLTLIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAVT 80 (429)
Q Consensus 3 ~~~~a~g~~p~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~ 80 (429)
.+|||||++|..| ||.. .+++..+...... . .. ....+++|||+|.+|+.+|..|++.|.+|+
T Consensus 135 ~lviAtG~~p~~p~i~G~~-~~~t~~~~~~~~~--~---------l~---~~~~~vvViGgG~~g~e~A~~l~~~g~~Vt 199 (466)
T 3l8k_A 135 YMIIASGAETAKLRLPGVE-YCLTSDDIFGYKT--S---------FR---KLPQDMVIIGAGYIGLEIASIFRLMGVQTH 199 (466)
T ss_dssp EEEECCCEEECCCCCTTGG-GSBCHHHHHSTTC--S---------CC---SCCSEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred EEEECCCCCccCCCCCCcc-ceEeHHHHHHHHH--H---------Hh---hCCCeEEEECCCHHHHHHHHHHHHcCCEEE
Confidence 5899999999876 4543 1223222210000 0 00 234689999999999999999999999999
Q ss_pred EEcCCC
Q 014198 81 LIEKSS 86 (429)
Q Consensus 81 lie~~~ 86 (429)
++++.+
T Consensus 200 lv~~~~ 205 (466)
T 3l8k_A 200 IIEMLD 205 (466)
T ss_dssp EECSSS
T ss_pred EEEeCC
Confidence 999976
No 167
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.87 E-value=2.1e-09 Score=103.01 Aligned_cols=109 Identities=18% Similarity=0.247 Sum_probs=74.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHH---CCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAK---KGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNG 129 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~---~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 129 (429)
..||+|||||++|+++|..|++ .|++|+|||+.+... + . ..+..+.. +.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~-------------~------~-------~~~~~~~~--g~ 55 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQ-------------F------V-------PSNPWVGV--GW 55 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEE-------------C------G-------GGHHHHHH--TS
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCc-------------c------c-------CCcccccc--Cc
Confidence 4799999999999999999999 899999999987100 0 0 00111110 00
Q ss_pred CCCcCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEE
Q 014198 130 PDNYGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVI 209 (429)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~ 209 (429)
..+..+...+.+.+ ++.|++++.
T Consensus 56 --------------------------------------------------------~~~~~~~~~l~~~~-~~~gv~~~~ 78 (437)
T 3sx6_A 56 --------------------------------------------------------KERDDIAFPIRHYV-ERKGIHFIA 78 (437)
T ss_dssp --------------------------------------------------------SCHHHHEEECHHHH-HTTTCEEEC
T ss_pred --------------------------------------------------------cCHHHHHHHHHHHH-HHCCCEEEE
Confidence 01112222455566 677999986
Q ss_pred ceEEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHH
Q 014198 210 GKVERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKF 250 (429)
Q Consensus 210 ~~v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~ 250 (429)
+.|++++.+ +. .|.+.++.++.+|.+|+|+|......
T Consensus 79 ~~v~~id~~-~~---~V~~~~g~~i~~d~lviAtG~~~~~~ 115 (437)
T 3sx6_A 79 QSAEQIDAE-AQ---NITLADGNTVHYDYLMIATGPKLAFE 115 (437)
T ss_dssp SCEEEEETT-TT---EEEETTSCEEECSEEEECCCCEECGG
T ss_pred eEEEEEEcC-CC---EEEECCCCEEECCEEEECCCCCcCcc
Confidence 559999865 33 36777888899999999999866533
No 168
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.87 E-value=9.7e-09 Score=99.20 Aligned_cols=35 Identities=31% Similarity=0.319 Sum_probs=32.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+||+|||||++|+++|..|++.|++|+||||..
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~ 37 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKG 37 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTS
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 35899999999999999999999999999999766
No 169
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.86 E-value=5.4e-09 Score=101.43 Aligned_cols=34 Identities=29% Similarity=0.406 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
++||+|||||++|+++|..|++.|++|+|||+..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~ 38 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRG 38 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 5799999999999999999999999999999965
No 170
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.86 E-value=2.3e-08 Score=95.58 Aligned_cols=59 Identities=15% Similarity=0.215 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHH
Q 014198 189 QLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKF 250 (429)
Q Consensus 189 ~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~ 250 (429)
..+.++|.+.+ ++.|++|++++ |++|..+ ++++.+|.+ +|++++||.||+|+|.++..+
T Consensus 234 ~~l~~~l~~~~-~~~G~~i~~~~~V~~I~~~-~~~v~~v~~-~g~~~~ad~VV~a~~~~~~~~ 293 (433)
T 1d5t_A 234 GELPQGFARLS-AIYGGTYMLNKPVDDIIME-NGKVVGVKS-EGEVARCKQLICDPSYVPDRV 293 (433)
T ss_dssp THHHHHHHHHH-HHHTCCCBCSCCCCEEEEE-TTEEEEEEE-TTEEEECSEEEECGGGCGGGE
T ss_pred HHHHHHHHHHH-HHcCCEEECCCEEEEEEEe-CCEEEEEEE-CCeEEECCEEEECCCCCcccc
Confidence 58899999998 78899999999 9999987 777776765 788999999999999998643
No 171
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.86 E-value=1.8e-09 Score=99.75 Aligned_cols=95 Identities=19% Similarity=0.259 Sum_probs=74.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDN 132 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 132 (429)
..+|+|||+|..|+.+|..|++.|.+|+++++..... . .
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~----------------------------~----------~--- 211 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLR----------------------------A----------S--- 211 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC----------------------------S----------C---
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccC----------------------------C----------C---
Confidence 4689999999999999999999999999999886100 0 0
Q ss_pred cCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-
Q 014198 133 YGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK- 211 (429)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~- 211 (429)
..+.+.+.+..|++++.++
T Consensus 212 ------------------------------------------------------------~~~~~~l~~~~gv~i~~~~~ 231 (338)
T 3itj_A 212 ------------------------------------------------------------TIMQKRAEKNEKIEILYNTV 231 (338)
T ss_dssp ------------------------------------------------------------HHHHHHHHHCTTEEEECSEE
T ss_pred ------------------------------------------------------------HHHHHHHHhcCCeEEeecce
Confidence 0455555233499999999
Q ss_pred EEEEEEccCCcEEEEEEeC-----CeEEEcCEEEEcCCCCchH
Q 014198 212 VERVGVGEGGRVESVMIEG-----GRVVESDAVVLALGPWSGK 249 (429)
Q Consensus 212 v~~i~~~~~g~v~~v~~~~-----g~~i~ad~vV~a~G~~s~~ 249 (429)
|+++..+ ++++..|++.+ +.++.+|.||+|+|...+.
T Consensus 232 v~~i~~~-~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 273 (338)
T 3itj_A 232 ALEAKGD-GKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPAT 273 (338)
T ss_dssp EEEEEES-SSSEEEEEEEETTTTEEEEEECSEEEECSCEEECC
T ss_pred eEEEEcc-cCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCCh
Confidence 9999987 66676777765 4679999999999976543
No 172
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.86 E-value=2.3e-09 Score=106.93 Aligned_cols=66 Identities=29% Similarity=0.303 Sum_probs=47.2
Q ss_pred ccccCCCCCCCcc--CcceEEEeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcEE
Q 014198 3 ATLLAPSSAPTYL--PGLRLTLIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAVT 80 (429)
Q Consensus 3 ~~~~a~g~~p~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~ 80 (429)
++|||||++|..| ||.....++..++... . ....+|+|||||.+|+.+|..|++.|.+|+
T Consensus 252 ~lviAtGs~p~~p~i~G~~~~~~~~~~~~~~---------------~---~~~~~vvViGgG~~g~E~A~~l~~~g~~Vt 313 (598)
T 2x8g_A 252 KIILATGERPKYPEIPGAVEYGITSDDLFSL---------------P---YFPGKTLVIGASYVALECAGFLASLGGDVT 313 (598)
T ss_dssp EEEECCCEEECCCSSTTHHHHCEEHHHHTTC---------------S---SCCCSEEEECCSHHHHHHHHHHHHTTCCEE
T ss_pred EEEEeCCCCCCCCCCCCcccceEcHHHHhhC---------------c---cCCCEEEEECCCHHHHHHHHHHHHcCCEEE
Confidence 6899999999876 5643211222211000 0 123479999999999999999999999999
Q ss_pred EEcCCC
Q 014198 81 LIEKSS 86 (429)
Q Consensus 81 lie~~~ 86 (429)
++++..
T Consensus 314 lv~~~~ 319 (598)
T 2x8g_A 314 VMVRSI 319 (598)
T ss_dssp EEESSC
T ss_pred EEECCc
Confidence 999864
No 173
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.86 E-value=1.5e-08 Score=98.31 Aligned_cols=38 Identities=24% Similarity=0.244 Sum_probs=34.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCcc
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVAC 89 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~ 89 (429)
..+||+|||||++|+++|+.|+++|++|+|||+..+++
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~GG 62 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEYRIGG 62 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTH
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCCCCCC
Confidence 36899999999999999999999999999999965554
No 174
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.86 E-value=2.8e-09 Score=97.34 Aligned_cols=48 Identities=15% Similarity=0.163 Sum_probs=39.0
Q ss_pred hhcCcEEEEce-EEEEEEccCCcEEEEEEe--CCe--EEEcCEEEEcCCCCchH
Q 014198 201 NDYGLEVVIGK-VERVGVGEGGRVESVMIE--GGR--VVESDAVVLALGPWSGK 249 (429)
Q Consensus 201 ~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~--~g~--~i~ad~vV~a~G~~s~~ 249 (429)
++.|++++.++ |+++..+ ++++.+|++. +|. ++.+|.||+|+|...+.
T Consensus 194 ~~~gv~~~~~~~v~~i~~~-~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~ 246 (315)
T 3r9u_A 194 KNEKIELITSASVDEVYGD-KMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRN 246 (315)
T ss_dssp HCTTEEEECSCEEEEEEEE-TTEEEEEEEECTTSCEEEECCSCEEECSCEEECC
T ss_pred hcCCeEEEeCcEEEEEEcC-CCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCCc
Confidence 57799999999 9999877 6667677776 664 78999999999975543
No 175
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.85 E-value=3.1e-09 Score=102.69 Aligned_cols=34 Identities=21% Similarity=0.272 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKK--GAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~--G~~V~lie~~~ 86 (429)
..+|+|||+|.+|+.+|..|++. |.+|+++++..
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~ 262 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRAS 262 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSS
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCC
Confidence 56899999999999999999998 89999999987
No 176
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.85 E-value=2.5e-08 Score=97.76 Aligned_cols=53 Identities=19% Similarity=0.197 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCch
Q 014198 190 LFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSG 248 (429)
Q Consensus 190 ~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~ 248 (429)
.+.+.|.+.+ |++|++++ |++|..+ ++++. |++.+|+++.||.||+|++....
T Consensus 216 ~l~~~l~~~l----g~~i~~~~~V~~i~~~-~~~v~-v~~~~g~~~~ad~VI~a~p~~~l 269 (520)
T 1s3e_A 216 QVSERIMDLL----GDRVKLERPVIYIDQT-RENVL-VETLNHEMYEAKYVISAIPPTLG 269 (520)
T ss_dssp HHHHHHHHHH----GGGEESSCCEEEEECS-SSSEE-EEETTSCEEEESEEEECSCGGGG
T ss_pred HHHHHHHHHc----CCcEEcCCeeEEEEEC-CCeEE-EEECCCeEEEeCEEEECCCHHHH
Confidence 4455554443 78999999 9999887 55554 78878889999999999998653
No 177
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.84 E-value=4e-09 Score=100.76 Aligned_cols=35 Identities=26% Similarity=0.493 Sum_probs=32.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGA--AVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~--~V~lie~~~ 86 (429)
+.+||+|||||++|+++|..|+++|. +|+|||+..
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDAT 39 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCC
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCC
Confidence 35799999999999999999999998 799999986
No 178
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.84 E-value=2.6e-08 Score=96.90 Aligned_cols=35 Identities=31% Similarity=0.321 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
+.+||+|||||++|+++|..|+++|++|+|||+..
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 58 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRS 58 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 46899999999999999999999999999999876
No 179
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.84 E-value=3.7e-09 Score=96.42 Aligned_cols=93 Identities=26% Similarity=0.344 Sum_probs=71.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDN 132 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 132 (429)
..+|+|||+|.+|+.+|..|++.|.+|+++++.+.. ..+
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~---------------------------------------~~~-- 182 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM---------------------------------------KAD-- 182 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSC---------------------------------------CSC--
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCccc---------------------------------------Ccc--
Confidence 468999999999999999999999999999987610 000
Q ss_pred cCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhh-cCcEEEEce
Q 014198 133 YGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVND-YGLEVVIGK 211 (429)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~-~Gv~v~~~~ 211 (429)
..+.+.+ .+ .|++++.++
T Consensus 183 ------------------------------------------------------------~~~~~~l-~~~~gv~v~~~~ 201 (310)
T 1fl2_A 183 ------------------------------------------------------------QVLQDKL-RSLKNVDIILNA 201 (310)
T ss_dssp ------------------------------------------------------------HHHHHHH-HTCTTEEEESSE
T ss_pred ------------------------------------------------------------HHHHHHH-hhCCCeEEecCC
Confidence 0344555 44 699999999
Q ss_pred -EEEEEEccCCcEEEEEEeC---C--eEEEcCEEEEcCCCCch
Q 014198 212 -VERVGVGEGGRVESVMIEG---G--RVVESDAVVLALGPWSG 248 (429)
Q Consensus 212 -v~~i~~~~~g~v~~v~~~~---g--~~i~ad~vV~a~G~~s~ 248 (429)
|+++..+ ++++.+|++.+ | .++.+|.||+|+|...+
T Consensus 202 ~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 243 (310)
T 1fl2_A 202 QTTEVKGD-GSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPN 243 (310)
T ss_dssp EEEEEEES-SSSEEEEEEEETTTCCEEEEECSEEEECSCEEES
T ss_pred ceEEEEcC-CCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccC
Confidence 9999876 66666677653 4 37899999999996544
No 180
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.82 E-value=2.7e-09 Score=108.10 Aligned_cols=34 Identities=29% Similarity=0.374 Sum_probs=31.7
Q ss_pred CCcEEEEC--CCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCG--GGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIG--aGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|+||| +|.+|+.+|..|++.|.+|+++++.+
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~ 558 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGA 558 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccc
Confidence 45799999 99999999999999999999999876
No 181
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.82 E-value=1e-08 Score=96.23 Aligned_cols=36 Identities=22% Similarity=0.343 Sum_probs=32.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.+..+|+|||||++|+++|..|...+.+|+|||+++
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~ 42 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEK 42 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSS
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCC
Confidence 346799999999999999999987889999999987
No 182
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.82 E-value=2.5e-08 Score=96.09 Aligned_cols=35 Identities=31% Similarity=0.414 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSV 87 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~ 87 (429)
++||+|||||++|+++|..|++.|++|+|||+..+
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~ 37 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGNL 37 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCC
Confidence 47999999999999999999999999999999854
No 183
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.82 E-value=1.1e-08 Score=93.31 Aligned_cols=34 Identities=41% Similarity=0.494 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|+|||+|..|+.+|..|++.|.+|+++++.+
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 176 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRD 176 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCC
Confidence 4689999999999999999999999999999876
No 184
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.81 E-value=2.9e-08 Score=95.74 Aligned_cols=37 Identities=30% Similarity=0.353 Sum_probs=34.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCc
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVA 88 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~ 88 (429)
..+||+|||||++|+++|..|++.|++|+|||++.++
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~G 39 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKALG 39 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTT
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCCCC
Confidence 4689999999999999999999999999999998643
No 185
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.81 E-value=2.2e-08 Score=96.90 Aligned_cols=36 Identities=33% Similarity=0.389 Sum_probs=33.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
+.++||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~ 39 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRG 39 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 346899999999999999999999999999999986
No 186
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.81 E-value=2.7e-08 Score=96.08 Aligned_cols=35 Identities=26% Similarity=0.265 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSV 87 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~ 87 (429)
++||+|||||++|+++|..|++.|++|+|||+..+
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~ 37 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKYW 37 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 47999999999999999999999999999999854
No 187
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.80 E-value=3.5e-08 Score=96.54 Aligned_cols=36 Identities=22% Similarity=0.305 Sum_probs=33.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...+||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 346899999999999999999999999999999965
No 188
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.80 E-value=7.8e-10 Score=105.73 Aligned_cols=42 Identities=26% Similarity=0.483 Sum_probs=34.9
Q ss_pred hhcCcEEEEceEEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCC
Q 014198 201 NDYGLEVVIGKVERVGVGEGGRVESVMIEGGRVVESDAVVLALGPW 246 (429)
Q Consensus 201 ~~~Gv~v~~~~v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~ 246 (429)
++.|++++.++|++|+.+ +. .|++++|+++.+|.+|+|+|+.
T Consensus 67 ~~~gv~~i~~~v~~Id~~-~~---~V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 67 PKFNIEFINEKAESIDPD-AN---TVTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp GGGTEEEECSCEEEEETT-TT---EEEETTCCEEECSEEEECCCCE
T ss_pred HHCCcEEEEeEEEEEECC-CC---EEEECCCCEEECCEEEEeCCCC
Confidence 566999998889999865 33 3678888899999999999974
No 189
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.80 E-value=2.8e-08 Score=96.28 Aligned_cols=35 Identities=31% Similarity=0.296 Sum_probs=33.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 39 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNE 39 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 45899999999999999999999999999999986
No 190
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.80 E-value=7.2e-09 Score=94.92 Aligned_cols=34 Identities=32% Similarity=0.387 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|+|||+|..|+.+|..|++.|.+|+++++..
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~ 187 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRD 187 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCC
Confidence 4689999999999999999999999999999886
No 191
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.79 E-value=1.3e-08 Score=98.00 Aligned_cols=33 Identities=27% Similarity=0.467 Sum_probs=31.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKK--GAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~--G~~V~lie~~~ 86 (429)
+||+|||||++|+++|..|+++ |.+|+|||+++
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~ 37 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQA 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 5999999999999999999998 89999999998
No 192
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.79 E-value=1.1e-08 Score=93.68 Aligned_cols=93 Identities=22% Similarity=0.305 Sum_probs=72.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDN 132 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 132 (429)
..+|+|||+|..|+.+|..|++.|.+|+++++.+... ..
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~--------------------------------------~~--- 193 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM--------------------------------------CE--- 193 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC--------------------------------------SC---
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC--------------------------------------CC---
Confidence 4689999999999999999999999999999876100 00
Q ss_pred cCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-
Q 014198 133 YGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK- 211 (429)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~- 211 (429)
..+.+.+ .+.|++++.++
T Consensus 194 ------------------------------------------------------------~~l~~~l-~~~gv~i~~~~~ 212 (319)
T 3cty_A 194 ------------------------------------------------------------NAYVQEI-KKRNIPYIMNAQ 212 (319)
T ss_dssp ------------------------------------------------------------HHHHHHH-HHTTCCEECSEE
T ss_pred ------------------------------------------------------------HHHHHHH-hcCCcEEEcCCe
Confidence 0355555 57799999999
Q ss_pred EEEEEEccCCcEEEEEEe---CCe--EEEcCEEEEcCCCCch
Q 014198 212 VERVGVGEGGRVESVMIE---GGR--VVESDAVVLALGPWSG 248 (429)
Q Consensus 212 v~~i~~~~~g~v~~v~~~---~g~--~i~ad~vV~a~G~~s~ 248 (429)
|+++..+ ++++.+|.+. +|. ++.+|.||+|+|...+
T Consensus 213 v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 253 (319)
T 3cty_A 213 VTEIVGD-GKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQ 253 (319)
T ss_dssp EEEEEES-SSSEEEEEEEETTTCCEEEECCSEEEECCCEEEC
T ss_pred EEEEecC-CceEEEEEEEEcCCCceEEEecCEEEEeeCCccC
Confidence 9999876 5656667665 454 6899999999997654
No 193
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.78 E-value=3.5e-08 Score=95.68 Aligned_cols=38 Identities=26% Similarity=0.344 Sum_probs=34.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCcc
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVAC 89 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~ 89 (429)
..+||+|||||++|+++|+.|++.|++|+|||++.+++
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~~GG 56 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESHKLGG 56 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCC
Confidence 36899999999999999999999999999999886543
No 194
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.78 E-value=3.4e-08 Score=94.88 Aligned_cols=37 Identities=24% Similarity=0.308 Sum_probs=33.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCc
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVA 88 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~ 88 (429)
.++||+|||||++|+++|+.|++.|++|+|||++.++
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~G 39 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELG 39 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSCTT
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCCCC
Confidence 3589999999999999999999999999999998643
No 195
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.78 E-value=3.8e-08 Score=95.34 Aligned_cols=37 Identities=32% Similarity=0.381 Sum_probs=34.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCc
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVA 88 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~ 88 (429)
.++||+|||||++|+++|..|++.|++|+|||++.++
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~~G 46 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKALG 46 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSCTT
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCCcC
Confidence 3689999999999999999999999999999998643
No 196
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.77 E-value=5.7e-08 Score=93.90 Aligned_cols=34 Identities=29% Similarity=0.342 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
++||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4799999999999999999999999999999986
No 197
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.77 E-value=2.9e-08 Score=96.21 Aligned_cols=35 Identities=37% Similarity=0.333 Sum_probs=33.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.++||+|||||++|+++|+.|++.|++|+|||+..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 36 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYK 36 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 36899999999999999999999999999999987
No 198
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.76 E-value=3.1e-08 Score=96.22 Aligned_cols=36 Identities=25% Similarity=0.289 Sum_probs=33.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
+.++||+|||||++|+++|..|++.|++|+||||..
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~ 39 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVE 39 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecc
Confidence 356899999999999999999999999999999843
No 199
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.76 E-value=1.8e-08 Score=91.99 Aligned_cols=34 Identities=29% Similarity=0.470 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|+|||+|.+|+.+|..|++.|.+|+|+++..
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 4689999999999999999999999999999875
No 200
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.76 E-value=1.8e-08 Score=95.80 Aligned_cols=35 Identities=26% Similarity=0.394 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCc--EEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAA--VTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~--V~lie~~~ 86 (429)
..+||+|||||++|+++|..|+++|++ |+|+|+.+
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~ 44 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREP 44 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCC
Confidence 468999999999999999999999987 99999987
No 201
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.75 E-value=3.2e-08 Score=95.55 Aligned_cols=38 Identities=26% Similarity=0.274 Sum_probs=34.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCcc
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVAC 89 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~ 89 (429)
..+||+|||||++|+++|+.|+++|++|+|||+..+++
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~~~GG 41 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEFRYGG 41 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSCTTH
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCCCC
Confidence 36899999999999999999999999999999965553
No 202
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.75 E-value=1.4e-08 Score=93.47 Aligned_cols=34 Identities=38% Similarity=0.543 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|+|||+|..|+.+|..|++.|.+|+++++.+
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 192 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 192 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCC
Confidence 4689999999999999999999999999999886
No 203
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.75 E-value=5.3e-08 Score=95.72 Aligned_cols=36 Identities=31% Similarity=0.462 Sum_probs=33.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHC-CCcEEEEcCCC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKK-GAAVTLIEKSS 86 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~-G~~V~lie~~~ 86 (429)
..++|+||||||.+|+.+|..|++. +.+|+|||++.
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 4579999999999999999999985 79999999987
No 204
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.75 E-value=2.4e-08 Score=94.70 Aligned_cols=33 Identities=36% Similarity=0.552 Sum_probs=31.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCc--EEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAA--VTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~--V~lie~~~ 86 (429)
.+|+|||||++|+++|..|+++|++ |+|||+.+
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~ 37 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEP 37 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCC
Confidence 5899999999999999999999987 99999987
No 205
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.74 E-value=4.7e-08 Score=90.10 Aligned_cols=96 Identities=26% Similarity=0.253 Sum_probs=73.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDN 132 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 132 (429)
..+|+|||+|..|+.+|..|++.|.+|+++++.+... ..
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~----------------~~------------------------- 190 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFR----------------AH------------------------- 190 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCC----------------SC-------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccC----------------cc-------------------------
Confidence 4689999999999999999999999999999876100 00
Q ss_pred cCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-
Q 014198 133 YGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK- 211 (429)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~- 211 (429)
..+.+.+.+.+ ++.|++++.++
T Consensus 191 --------------------------------------------------------~~~~~~l~~~l-~~~gv~v~~~~~ 213 (335)
T 2zbw_A 191 --------------------------------------------------------EASVKELMKAH-EEGRLEVLTPYE 213 (335)
T ss_dssp --------------------------------------------------------HHHHHHHHHHH-HTTSSEEETTEE
T ss_pred --------------------------------------------------------HHHHHHHHhcc-ccCCeEEecCCc
Confidence 01112555666 77899999999
Q ss_pred EEEEEEccCCcEEEEEEe---CC--eEEEcCEEEEcCCCCch
Q 014198 212 VERVGVGEGGRVESVMIE---GG--RVVESDAVVLALGPWSG 248 (429)
Q Consensus 212 v~~i~~~~~g~v~~v~~~---~g--~~i~ad~vV~a~G~~s~ 248 (429)
|+++..+ +++..|.+. +| .++.+|.||+|+|...+
T Consensus 214 v~~i~~~--~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 253 (335)
T 2zbw_A 214 LRRVEGD--ERVRWAVVFHNQTQEELALEVDAVLILAGYITK 253 (335)
T ss_dssp EEEEEES--SSEEEEEEEETTTCCEEEEECSEEEECCCEEEE
T ss_pred ceeEccC--CCeeEEEEEECCCCceEEEecCEEEEeecCCCC
Confidence 9999864 445556665 56 57999999999997665
No 206
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.74 E-value=6.2e-08 Score=93.46 Aligned_cols=35 Identities=29% Similarity=0.257 Sum_probs=33.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSV 87 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~ 87 (429)
.+||+|||||++|+++|..|++.|++|+|||++.+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~~ 40 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGEV 40 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 48999999999999999999999999999999874
No 207
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.74 E-value=2.7e-08 Score=91.29 Aligned_cols=34 Identities=38% Similarity=0.507 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|+|||+|..|+.+|..|++.|.+|+++++.+
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 185 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRD 185 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCC
Confidence 4689999999999999999999999999999876
No 208
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.74 E-value=2.7e-07 Score=89.88 Aligned_cols=57 Identities=23% Similarity=0.211 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHhhcC-cEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCch
Q 014198 189 QLFTKTLLNKAVNDYG-LEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSG 248 (429)
Q Consensus 189 ~~l~~~l~~~~~~~~G-v~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~ 248 (429)
..+.+.|.+.+ .+.| ++|++++ |++|..+ ++.+ .|++.+|.+++||.||+|+|....
T Consensus 255 ~~l~~~l~~~l-~~~g~~~i~~~~~V~~i~~~-~~~v-~v~~~~g~~~~ad~vI~a~~~~~l 313 (495)
T 2vvm_A 255 SAFARRFWEEA-AGTGRLGYVFGCPVRSVVNE-RDAA-RVTARDGREFVAKRVVCTIPLNVL 313 (495)
T ss_dssp HHHHHHHHHHH-HTTTCEEEESSCCEEEEEEC-SSSE-EEEETTCCEEEEEEEEECCCGGGG
T ss_pred HHHHHHHHHHh-hhcCceEEEeCCEEEEEEEc-CCEE-EEEECCCCEEEcCEEEECCCHHHH
Confidence 47888888888 7778 9999999 9999987 4444 477777778999999999997543
No 209
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.73 E-value=7.6e-08 Score=92.47 Aligned_cols=47 Identities=15% Similarity=0.151 Sum_probs=35.5
Q ss_pred cCcEEEEce-EEEEEEccCC-cEEEEEEe---------------CC--eEEEcCEEEEcCCCCchH
Q 014198 203 YGLEVVIGK-VERVGVGEGG-RVESVMIE---------------GG--RVVESDAVVLALGPWSGK 249 (429)
Q Consensus 203 ~Gv~v~~~~-v~~i~~~~~g-~v~~v~~~---------------~g--~~i~ad~vV~a~G~~s~~ 249 (429)
.|+++++++ +++|..++++ ++.+|++. +| .++.+|.||.|+|..++.
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~ 335 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP 335 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCC
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCC
Confidence 789999999 9999865235 66555543 23 579999999999976654
No 210
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.73 E-value=1.8e-08 Score=96.37 Aligned_cols=34 Identities=44% Similarity=0.681 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHH--CCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAK--KGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~--~G~~V~lie~~~ 86 (429)
..||+|||||++|+++|+.|++ .|++|+|||+++
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~ 37 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCC
Confidence 3689999999999999999999 889999999987
No 211
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.72 E-value=1.5e-07 Score=95.77 Aligned_cols=38 Identities=29% Similarity=0.422 Sum_probs=34.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC-Ccc
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS-VAC 89 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~-~~~ 89 (429)
..+||+|||||++|+++|+.|++.|++|+|+|+.. +++
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 35899999999999999999999999999999987 444
No 212
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.72 E-value=3.8e-08 Score=95.66 Aligned_cols=33 Identities=21% Similarity=0.311 Sum_probs=31.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-CCCcEEEEcC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAK-KGAAVTLIEK 84 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~-~G~~V~lie~ 84 (429)
..+||+|||||++|+++|+.|++ .|++|+|||+
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 35899999999999999999999 9999999993
No 213
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.72 E-value=3.4e-07 Score=89.69 Aligned_cols=35 Identities=23% Similarity=0.279 Sum_probs=32.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...+|+|||+|.+|+.+|..|++.|.+|+++++.+
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~ 211 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTP 211 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSC
T ss_pred ccceEEEECCCchHHHHHHHHHhhCCEEEEEECCC
Confidence 35689999999999999999999999999999987
No 214
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.72 E-value=6.7e-08 Score=93.06 Aligned_cols=33 Identities=30% Similarity=0.333 Sum_probs=31.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
+||+|||||++|+++|..|++.|++|+|||+++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCC
Confidence 699999999999999999999999999999985
No 215
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.71 E-value=7.7e-08 Score=93.74 Aligned_cols=35 Identities=26% Similarity=0.402 Sum_probs=32.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC---CCcEEEEcCCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKK---GAAVTLIEKSSV 87 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~---G~~V~lie~~~~ 87 (429)
.+||+|||||++|+++|+.|++. |++|+|||++.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~~ 39 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDGI 39 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSCT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCCc
Confidence 47999999999999999999999 999999999874
No 216
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.71 E-value=2.6e-08 Score=96.41 Aligned_cols=34 Identities=35% Similarity=0.425 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKK--GAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~--G~~V~lie~~~ 86 (429)
+.||+|||||++|+++|+.|+++ |++|+|||+++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~ 38 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQAS 38 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCC
Confidence 36999999999999999999998 89999999997
No 217
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.71 E-value=6.3e-08 Score=91.73 Aligned_cols=33 Identities=24% Similarity=0.340 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGA--AVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~--~V~lie~~~ 86 (429)
.||+|||||++|+++|..|+++|+ +|+|||+++
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~ 36 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEK 36 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCC
Confidence 589999999999999999999998 899999987
No 218
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.71 E-value=1.1e-08 Score=97.25 Aligned_cols=33 Identities=36% Similarity=0.473 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHHH---CCCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAK---KGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~---~G~~V~lie~~~ 86 (429)
.||+|||||++|+++|..|++ .|++|+|||+++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCC
Confidence 489999999999999999999 899999999987
No 219
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.70 E-value=4.2e-08 Score=95.57 Aligned_cols=35 Identities=37% Similarity=0.465 Sum_probs=33.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSV 87 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~ 87 (429)
++||+|||||++|+++|..|++.|++|+|||++.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~ 36 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSRL 36 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSST
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCc
Confidence 48999999999999999999999999999999864
No 220
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.70 E-value=4.3e-08 Score=91.34 Aligned_cols=97 Identities=22% Similarity=0.272 Sum_probs=74.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDN 132 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 132 (429)
..+|+|||+|..|+.+|..|++.|.+|+++++...... . .
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~---------------~-----------~-------------- 202 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG---------------H-----------G-------------- 202 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS---------------C-----------S--------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC---------------C-----------H--------------
Confidence 46899999999999999999999999999998761000 0 0
Q ss_pred cCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhhcCcEEEEce-
Q 014198 133 YGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVNDYGLEVVIGK- 211 (429)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~~Gv~v~~~~- 211 (429)
.+.+.+.+.. ++.|++++.++
T Consensus 203 ---------------------------------------------------------~~~~~l~~~~-~~~gv~i~~~~~ 224 (360)
T 3ab1_A 203 ---------------------------------------------------------KTAHEVERAR-ANGTIDVYLETE 224 (360)
T ss_dssp ---------------------------------------------------------HHHHSSHHHH-HHTSEEEESSEE
T ss_pred ---------------------------------------------------------HHHHHHHHHh-hcCceEEEcCcC
Confidence 0111344455 66799999999
Q ss_pred EEEEEEccCCcEEEEEEe--CC--eEEEcCEEEEcCCCCch
Q 014198 212 VERVGVGEGGRVESVMIE--GG--RVVESDAVVLALGPWSG 248 (429)
Q Consensus 212 v~~i~~~~~g~v~~v~~~--~g--~~i~ad~vV~a~G~~s~ 248 (429)
|+++..+ ++++..|.+. +| ..+.+|.||+|+|...+
T Consensus 225 v~~i~~~-~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~ 264 (360)
T 3ab1_A 225 VASIEES-NGVLTRVHLRSSDGSKWTVEADRLLILIGFKSN 264 (360)
T ss_dssp EEEEEEE-TTEEEEEEEEETTCCEEEEECSEEEECCCBCCS
T ss_pred HHHhccC-CCceEEEEEEecCCCeEEEeCCEEEECCCCCCC
Confidence 9999876 6766667664 66 57999999999997655
No 221
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.70 E-value=1.7e-08 Score=94.21 Aligned_cols=33 Identities=30% Similarity=0.342 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..||+|||||++|+++|..|++.| +|+|||++.
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~ 40 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEP 40 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCC
Confidence 569999999999999999999999 999999987
No 222
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.70 E-value=3.3e-08 Score=97.14 Aligned_cols=59 Identities=19% Similarity=0.272 Sum_probs=44.5
Q ss_pred HHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeC---C--eEEEcC-EEEEcCCCC-chHHH
Q 014198 193 KTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEG---G--RVVESD-AVVLALGPW-SGKFE 251 (429)
Q Consensus 193 ~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~---g--~~i~ad-~vV~a~G~~-s~~~~ 251 (429)
..++..+.++.|++|++++ |++|..++++++.+|++.+ | .+++|+ .||+|+|++ +..++
T Consensus 212 ~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL 278 (546)
T 2jbv_A 212 VSYIHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLL 278 (546)
T ss_dssp HHHTGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHH
T ss_pred HHHHHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhh
Confidence 3444545246799999999 9999987337888888754 4 278898 999999994 66665
No 223
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.69 E-value=4.9e-08 Score=93.85 Aligned_cols=34 Identities=26% Similarity=0.394 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKK--GAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~--G~~V~lie~~~ 86 (429)
.+||+|||||++|+++|+.|++. |.+|+|||+.+
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~ 38 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATE 38 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 46999999999999999999997 78999999987
No 224
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.69 E-value=8.3e-08 Score=93.13 Aligned_cols=35 Identities=26% Similarity=0.303 Sum_probs=32.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKS 85 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~ 85 (429)
...+||+|||||++|+++|+.|++.|++|+||||.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 34689999999999999999999999999999964
No 225
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.69 E-value=9.7e-08 Score=92.70 Aligned_cols=31 Identities=23% Similarity=0.317 Sum_probs=30.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHH-CCCcEEEEc
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAK-KGAAVTLIE 83 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~-~G~~V~lie 83 (429)
++||+|||||++|+++|+.|++ .|++|+|||
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE 34 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVID 34 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 5899999999999999999999 999999999
No 226
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.68 E-value=2.6e-08 Score=94.37 Aligned_cols=35 Identities=26% Similarity=0.340 Sum_probs=32.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGA--AVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~--~V~lie~~~ 86 (429)
..+||+|||||++|+++|..|++.|. +|+|||+..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 42 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEA 42 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCC
Confidence 46899999999999999999999998 599999987
No 227
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.68 E-value=7.3e-08 Score=88.54 Aligned_cols=34 Identities=29% Similarity=0.408 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|+|||+|..|+.+|..|++.|.+|+++++..
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~ 187 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRD 187 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecC
Confidence 4689999999999999999999999999999876
No 228
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.67 E-value=1.1e-07 Score=91.58 Aligned_cols=37 Identities=22% Similarity=0.338 Sum_probs=33.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCc
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVA 88 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~ 88 (429)
..+||+|||||++|+++|..|++.|++|+|||++.++
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~G 40 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQALG 40 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccCCCC
Confidence 3589999999999999999999999999999996544
No 229
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.67 E-value=1.7e-08 Score=90.51 Aligned_cols=37 Identities=32% Similarity=0.456 Sum_probs=34.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC-Ccc
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS-VAC 89 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~-~~~ 89 (429)
++||+|||||++|+++|+.|+++|++|+|+||.+ +++
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG 39 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGG 39 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCC
Confidence 5799999999999999999999999999999988 543
No 230
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.66 E-value=6.8e-08 Score=94.46 Aligned_cols=93 Identities=26% Similarity=0.328 Sum_probs=72.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCccccccccCCeeeeccCCCCcchhhhHHHHHHHHHHHHHhCCCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVACAASGKAGGFLALDWCDGGPLSSLARASFNLHRSLAEELNGPDN 132 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~~~s~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 132 (429)
..+|+|||+|.+|+.+|..|++.|.+|+++++.+... .+
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~---------------------------------------~~-- 393 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK---------------------------------------AD-- 393 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC---------------------------------------SC--
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC---------------------------------------cC--
Confidence 4689999999999999999999999999999876100 00
Q ss_pred cCeeeeeeeEEeecccccCCCCCccccCCCCCCCCCCCCCCCCccCccccceeEehHHHHHHHHHHHHhh-cCcEEEEce
Q 014198 133 YGYRALTTLSLTVTESQQSGSKPSNKANSLIPSWVDGPARSPTTIGSTQTTAQVHPQLFTKTLLNKAVND-YGLEVVIGK 211 (429)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~~~~~~-~Gv~v~~~~ 211 (429)
..+.+.+ .+ .|++++.++
T Consensus 394 ------------------------------------------------------------~~l~~~l-~~~~gV~v~~~~ 412 (521)
T 1hyu_A 394 ------------------------------------------------------------QVLQDKV-RSLKNVDIILNA 412 (521)
T ss_dssp ------------------------------------------------------------HHHHHHH-TTCTTEEEECSE
T ss_pred ------------------------------------------------------------HHHHHHH-hcCCCcEEEeCC
Confidence 0345555 55 699999999
Q ss_pred -EEEEEEccCCcEEEEEEeC---C--eEEEcCEEEEcCCCCch
Q 014198 212 -VERVGVGEGGRVESVMIEG---G--RVVESDAVVLALGPWSG 248 (429)
Q Consensus 212 -v~~i~~~~~g~v~~v~~~~---g--~~i~ad~vV~a~G~~s~ 248 (429)
++++..+ ++++.++.+.+ | .++.+|.||+|+|...+
T Consensus 413 ~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn 454 (521)
T 1hyu_A 413 QTTEVKGD-GSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPN 454 (521)
T ss_dssp EEEEEEEC-SSSEEEEEEEETTTCCEEEEECSEEEECCCEEES
T ss_pred EEEEEEcC-CCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCC
Confidence 9999876 66776677653 4 36899999999996543
No 231
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.66 E-value=1.2e-08 Score=92.79 Aligned_cols=54 Identities=13% Similarity=0.255 Sum_probs=41.4
Q ss_pred HHHHHHHhhcCcEEEEceEEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchH
Q 014198 194 TLLNKAVNDYGLEVVIGKVERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGK 249 (429)
Q Consensus 194 ~l~~~~~~~~Gv~v~~~~v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~ 249 (429)
.+.+.+ ++.|++++.++++.+..+ ++++..|++.++.++.+|.+|+++|...++
T Consensus 185 ~~~~~l-~~~g~~~~~~~v~~~~~~-~~~~~~v~~~~g~~i~~~~~vi~~g~~~~~ 238 (304)
T 4fk1_A 185 TIMDEL-SNKNIPVITESIRTLQGE-GGYLKKVEFHSGLRIERAGGFIVPTFFRPN 238 (304)
T ss_dssp HHHHHH-HTTTCCEECSCEEEEESG-GGCCCEEEETTSCEECCCEEEECCEEECSS
T ss_pred hhhhhh-hccceeEeeeeEEEeecC-CCeeeeeeccccceeeecceeeeeccccCC
Confidence 344555 677999988777777765 667778899899999999999998865543
No 232
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.66 E-value=1.8e-08 Score=92.86 Aligned_cols=34 Identities=32% Similarity=0.514 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|+|||+|..|+.+|..|++.|.+|+++++.+
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~ 188 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRD 188 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCC
Confidence 4689999999999999999999999999999876
No 233
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.65 E-value=3.9e-08 Score=102.93 Aligned_cols=71 Identities=14% Similarity=0.095 Sum_probs=49.2
Q ss_pred ccccCCCCCCCcc--CcceEE-EeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcE
Q 014198 3 ATLLAPSSAPTYL--PGLRLT-LIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAV 79 (429)
Q Consensus 3 ~~~~a~g~~p~~~--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V 79 (429)
.+|||||+.|..+ ||...+ +++...+... +.... .....+|+|||+|..|+.+|..|++.|.+|
T Consensus 244 ~lVlATGs~p~~~~ipG~~~~gv~~~~~~~~~--l~~~~-----------~~~gk~vvViGgG~~g~E~A~~L~~~G~~V 310 (965)
T 2gag_A 244 QVVLATGAHERPIVFENNDRPGIMLAGAVRSY--LNRYG-----------VRAGARIAVATTNDSAYELVRELAATGGVV 310 (965)
T ss_dssp EEEECCCEEECCCCCBTCCSTTEEEHHHHHHH--HHTTC-----------EESCSSEEEEESSTTHHHHHHHHGGGTCCS
T ss_pred EEEECCCCccCCCCCCCCCCCCEEEhHHHHHH--HHhcC-----------CCCCCeEEEEcCCHHHHHHHHHHHHcCCcE
Confidence 6899999998765 565433 4443322110 00000 012358999999999999999999999999
Q ss_pred EEEcCCC
Q 014198 80 TLIEKSS 86 (429)
Q Consensus 80 ~lie~~~ 86 (429)
+|||+.+
T Consensus 311 tvv~~~~ 317 (965)
T 2gag_A 311 AVIDARS 317 (965)
T ss_dssp EEEESCS
T ss_pred EEEECCC
Confidence 9999986
No 234
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.65 E-value=1.4e-08 Score=91.88 Aligned_cols=47 Identities=11% Similarity=0.107 Sum_probs=37.2
Q ss_pred HHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCc
Q 014198 194 TLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWS 247 (429)
Q Consensus 194 ~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s 247 (429)
.+.+.+ ++.|++++. + |+++..+ + .|.+.++.++.+|.||+|+|...
T Consensus 179 ~~~~~l-~~~gv~i~~-~~v~~i~~~-~----~v~~~~g~~~~~D~vi~a~G~~p 226 (297)
T 3fbs_A 179 DQHALL-AARGVRVET-TRIREIAGH-A----DVVLADGRSIALAGLFTQPKLRI 226 (297)
T ss_dssp HHHHHH-HHTTCEEEC-SCEEEEETT-E----EEEETTSCEEEESEEEECCEEEC
T ss_pred HHHHHH-HHCCcEEEc-ceeeeeecC-C----eEEeCCCCEEEEEEEEEccCccc
Confidence 455566 778999996 7 9999743 2 57788888999999999999654
No 235
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.65 E-value=4.7e-07 Score=90.18 Aligned_cols=38 Identities=26% Similarity=0.358 Sum_probs=34.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCcc
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVAC 89 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~ 89 (429)
..+||+|||||++|+++|+.|+++|++|+|||+....+
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDS 82 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCC
Confidence 46899999999999999999999999999999998544
No 236
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.65 E-value=1.7e-07 Score=92.01 Aligned_cols=34 Identities=24% Similarity=0.347 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|+|||+|.+|+.+|..|++.+.+|+++++.+
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~ 218 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAETAKELYVFQRTP 218 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSC
T ss_pred CCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCC
Confidence 5689999999999999999999999999999987
No 237
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.65 E-value=4e-08 Score=95.25 Aligned_cols=34 Identities=24% Similarity=0.416 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKK--GAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~--G~~V~lie~~~ 86 (429)
.+||+|||||++|+++|..|++. |.+|+|||+..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~ 71 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGE 71 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 46999999999999999999996 89999999987
No 238
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.64 E-value=8.6e-08 Score=95.43 Aligned_cols=35 Identities=20% Similarity=0.354 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC--CCcEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKK--GAAVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~--G~~V~lie~~~ 86 (429)
...||+|||||++|+++|+.|+++ |.+|+|||+++
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~ 71 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGE 71 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCC
Confidence 457999999999999999999998 89999999987
No 239
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.63 E-value=3.5e-07 Score=89.58 Aligned_cols=39 Identities=15% Similarity=0.304 Sum_probs=35.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC-Ccc
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS-VAC 89 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~-~~~ 89 (429)
...+||+|||||++|+++|+.|++.|++|+|||++. +++
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG 80 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGG 80 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 456899999999999999999999999999999998 543
No 240
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.62 E-value=4.2e-08 Score=89.48 Aligned_cols=70 Identities=26% Similarity=0.323 Sum_probs=47.5
Q ss_pred ccccCCCCCCCcc--CcceEEEeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCcEE
Q 014198 3 ATLLAPSSAPTYL--PGLRLTLIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAAVT 80 (429)
Q Consensus 3 ~~~~a~g~~p~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~ 80 (429)
.+|||||++|..| ||.... ..+.+....... . ......+|+|||||.+|+.+|..|++.|.+|+
T Consensus 107 ~liiAtGs~~~~~~ipG~~~~--~~~~v~~~~~~~-~-----------~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vt 172 (312)
T 4gcm_A 107 AVIIATGAEYKKIGVPGEQEL--GGRGVSYCAVCD-G-----------AFFKNKRLFVIGGGDSAVEEGTFLTKFADKVT 172 (312)
T ss_dssp EEEECCCEEECCCCCTTTTTT--BTTTEESCHHHH-G-----------GGGTTCEEEEECCSHHHHHHHHHHTTTCSEEE
T ss_pred eeEEcccCccCcCCCCChhhh--CCccEEeeeccC-c-----------cccCCCEEEEECCCHHHHHHHHHHHhcCCEEE
Confidence 5899999999876 665321 001000000000 0 00123589999999999999999999999999
Q ss_pred EEcCCC
Q 014198 81 LIEKSS 86 (429)
Q Consensus 81 lie~~~ 86 (429)
|+|+.+
T Consensus 173 lv~~~~ 178 (312)
T 4gcm_A 173 IVHRRD 178 (312)
T ss_dssp EECSSS
T ss_pred EEeccc
Confidence 999976
No 241
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.61 E-value=3.5e-08 Score=95.07 Aligned_cols=67 Identities=13% Similarity=0.110 Sum_probs=48.2
Q ss_pred ccccCCC--CCCCcc--CcceE---EEeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHC
Q 014198 3 ATLLAPS--SAPTYL--PGLRL---TLIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKK 75 (429)
Q Consensus 3 ~~~~a~g--~~p~~~--~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~ 75 (429)
++|+||| +.|..| ||... .++......+... ....+|+|||+|.+|+.+|..|++.
T Consensus 157 ~VVvAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~-----------------~~~k~VvVVG~G~sg~eiA~~l~~~ 219 (464)
T 2xve_A 157 YVVCCTGHFSTPYVPEFEGFEKFGGRILHAHDFRDALE-----------------FKDKTVLLVGSSYSAEDIGSQCYKY 219 (464)
T ss_dssp EEEECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGG-----------------GTTSEEEEECCSTTHHHHHHHHHHT
T ss_pred EEEECCCCCCCCccCCCCCcccCCceEEehhhhCCHhH-----------------cCCCEEEEEcCCCCHHHHHHHHHHh
Confidence 6899999 788766 56431 1222222211111 1246899999999999999999999
Q ss_pred CCcEEEEcCCC
Q 014198 76 GAAVTLIEKSS 86 (429)
Q Consensus 76 G~~V~lie~~~ 86 (429)
|.+|+++++..
T Consensus 220 g~~V~li~~~~ 230 (464)
T 2xve_A 220 GAKKLISCYRT 230 (464)
T ss_dssp TCSEEEEECSS
T ss_pred CCeEEEEEECC
Confidence 99999999876
No 242
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.61 E-value=3.2e-07 Score=89.86 Aligned_cols=34 Identities=26% Similarity=0.361 Sum_probs=32.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.++|+||||+|.+|+.+|..|++ |.+|+|||++.
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~ 58 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGS 58 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSB
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCC
Confidence 46899999999999999999999 99999999996
No 243
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.60 E-value=1.1e-07 Score=91.45 Aligned_cols=33 Identities=24% Similarity=0.148 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKK--GAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~--G~~V~lie~~~ 86 (429)
+||+|||||++|+++|..|++. |.+|+|||+..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~ 35 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGD 35 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCC
Confidence 3899999999999999999997 99999999987
No 244
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.60 E-value=1e-07 Score=92.53 Aligned_cols=33 Identities=36% Similarity=0.482 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.+||+|||||++|+++|+.|+++ ++|+|||+++
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~ 140 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERG 140 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTS
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCC
Confidence 47999999999999999999999 9999999987
No 245
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.59 E-value=6.4e-08 Score=94.07 Aligned_cols=34 Identities=12% Similarity=0.233 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC---CcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKG---AAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G---~~V~lie~~~ 86 (429)
.+||+|||||++|+++|..|++.| .+|+|||++.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCC
Confidence 589999999999999999999988 9999999987
No 246
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.58 E-value=9.2e-08 Score=92.01 Aligned_cols=33 Identities=24% Similarity=0.157 Sum_probs=31.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKK--GAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~--G~~V~lie~~~ 86 (429)
+||+|||||++|+++|..|++. |.+|+|||++.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~ 35 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMND 35 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 4899999999999999999998 99999999987
No 247
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.58 E-value=2.2e-08 Score=101.09 Aligned_cols=63 Identities=24% Similarity=0.364 Sum_probs=43.3
Q ss_pred cccccCCCCCCCcc--CcceEE-EeeccccccceeeeecCCCCCCCCCCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCc
Q 014198 2 AATLLAPSSAPTYL--PGLRLT-LIGSRKLSKTTTFINCSAAQASPPMDGQRHSKKHVAVCGGGIIGVCTAYFLAKKGAA 78 (429)
Q Consensus 2 ~~~~~a~g~~p~~~--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIGaGi~Gl~~A~~L~~~G~~ 78 (429)
-++|||||++|..| ||.... +++..+.... ......+|+|||||.+|+.+|..|++.|.+
T Consensus 457 d~lviAtG~~p~~~~i~G~~~~~v~~~~~~l~~-----------------~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~ 519 (671)
T 1ps9_A 457 DETILASGIVPRTPPIDGIDHPKVLSYLDVLRD-----------------KAPVGNKVAIIGCGGIGFDTAMYLSQPGES 519 (671)
T ss_dssp SEEEECCCEEECCCCCBTTTSTTEEEHHHHHTS-----------------CCCCCSEEEEECCHHHHHHHHHHHTCCSSC
T ss_pred CEEEEccCCCcCCCCCCCCCCCcEeeHHHHhhC-----------------CCCCCCeEEEECCChhHHHHHHHHHhcCCC
Confidence 36899999999876 554321 3333221100 002346899999999999999999999987
Q ss_pred EEE
Q 014198 79 VTL 81 (429)
Q Consensus 79 V~l 81 (429)
|++
T Consensus 520 vtv 522 (671)
T 1ps9_A 520 TSQ 522 (671)
T ss_dssp GGG
T ss_pred ccc
Confidence 764
No 248
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.58 E-value=2.4e-07 Score=90.91 Aligned_cols=34 Identities=24% Similarity=0.409 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|+|||+|.+|+.+|..|++.|.+|+++++.+
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~ 224 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSA 224 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCC
Confidence 4689999999999999999999999999999987
No 249
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.58 E-value=1.6e-07 Score=85.96 Aligned_cols=33 Identities=33% Similarity=0.531 Sum_probs=31.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
+||+|||||.+|+++|+.|+++|++|+|+|+.+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 699999999999999999999999999999986
No 250
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.57 E-value=4.4e-07 Score=88.12 Aligned_cols=37 Identities=27% Similarity=0.301 Sum_probs=34.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCCcc
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSVAC 89 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~~~ 89 (429)
.+||+|||||++|+++|..|++.|++|+|||++.+++
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~~GG 44 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGAYGT 44 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSCSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 4899999999999999999999999999999987543
No 251
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.57 E-value=1.2e-07 Score=93.03 Aligned_cols=54 Identities=26% Similarity=0.378 Sum_probs=40.3
Q ss_pred HHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCC---eEEEcCEEEEcCCCC-chHHH
Q 014198 197 NKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGG---RVVESDAVVLALGPW-SGKFE 251 (429)
Q Consensus 197 ~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g---~~i~ad~vV~a~G~~-s~~~~ 251 (429)
..++...+++++.++ |+++..+ ++++.+|...+. ..+.|+.||+|+|+. |..++
T Consensus 218 ~~~~~r~nl~v~~~~~v~~i~~~-~~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LL 276 (526)
T 3t37_A 218 KAVRGRKNLTILTGSRVRRLKLE-GNQVRSLEVVGRQGSAEVFADQIVLCAGALESPALL 276 (526)
T ss_dssp HHHHTCTTEEEECSCEEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHH
T ss_pred ccccCCCCeEEEeCCEEEEEEec-CCeEEEEEEEecCceEEEeecceEEcccccCCcchh
Confidence 333245689999999 9999988 778888776532 367899999999964 44444
No 252
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.57 E-value=2.4e-07 Score=88.87 Aligned_cols=34 Identities=21% Similarity=0.368 Sum_probs=30.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--------------------C-CcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKK--------------------G-AAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~--------------------G-~~V~lie~~~ 86 (429)
..+|+|||+|.+|+.+|..|++. | .+|+|+++..
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~ 201 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRG 201 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCC
Confidence 46899999999999999999974 5 4899999886
No 253
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.57 E-value=1.3e-07 Score=93.81 Aligned_cols=33 Identities=21% Similarity=0.305 Sum_probs=31.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKK--GAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~--G~~V~lie~~~ 86 (429)
.||+|||||++|+++|+.|+++ |++|+|+|+.+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~ 36 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGE 36 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCC
Confidence 5899999999999999999998 89999999997
No 254
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.57 E-value=3.3e-08 Score=100.60 Aligned_cols=34 Identities=24% Similarity=0.218 Sum_probs=31.7
Q ss_pred CCcEEEEC--CCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCG--GGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIG--aGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|+||| ||.+|+.+|..|++.|.+|+|+++.+
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 46899998 99999999999999999999999876
No 255
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.55 E-value=1.6e-07 Score=91.65 Aligned_cols=34 Identities=32% Similarity=0.354 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.||++|||+|++|..+|..+++.|.+|+|||+..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~ 75 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVK 75 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccc
Confidence 4899999999999999999999999999999865
No 256
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.55 E-value=3.2e-08 Score=96.14 Aligned_cols=35 Identities=23% Similarity=0.278 Sum_probs=32.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.+.+|||||||++|+++|..|.+.+++|+|||+.+
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCC
Confidence 35689999999999999999999999999999986
No 257
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.54 E-value=4.8e-08 Score=93.60 Aligned_cols=35 Identities=29% Similarity=0.336 Sum_probs=33.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+||+|||||++|+++|+.|+++|++|+|+|+.+
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~ 155 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYD 155 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccC
Confidence 46799999999999999999999999999999987
No 258
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.54 E-value=6.8e-08 Score=90.83 Aligned_cols=35 Identities=17% Similarity=0.260 Sum_probs=31.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC--CcEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKG--AAVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G--~~V~lie~~~ 86 (429)
..+||+|||||++|+++|..|++.| .+|+|+|++.
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 3589999999999999999999999 5689999875
No 259
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.53 E-value=7.2e-07 Score=87.74 Aligned_cols=37 Identities=27% Similarity=0.302 Sum_probs=33.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCC-CcEEEEcCCCC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKG-AAVTLIEKSSV 87 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G-~~V~lie~~~~ 87 (429)
..++|+||||||.+|+.+|..|++.| .+|+|||++..
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 34699999999999999999999998 79999999864
No 260
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.52 E-value=6.1e-08 Score=91.77 Aligned_cols=44 Identities=23% Similarity=0.148 Sum_probs=35.3
Q ss_pred hhcCcEEEEceEEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCch
Q 014198 201 NDYGLEVVIGKVERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSG 248 (429)
Q Consensus 201 ~~~Gv~v~~~~v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~ 248 (429)
.+.|++++.++|++|+.+ +. .|.+.++.++.+|.+|+|+|....
T Consensus 66 ~~~gv~~i~~~v~~id~~-~~---~v~~~~g~~i~yd~LviAtG~~~~ 109 (401)
T 3vrd_B 66 RAHGIQVVHDSALGIDPD-KK---LVKTAGGAEFAYDRCVVAPGIDLL 109 (401)
T ss_dssp HHTTCEEECSCEEEEETT-TT---EEEETTSCEEECSEEEECCCEEEC
T ss_pred HHCCCEEEEeEEEEEEcc-Cc---EEEecccceeecceeeeccCCccc
Confidence 456999998889999865 33 267778889999999999997554
No 261
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.51 E-value=5.1e-07 Score=90.01 Aligned_cols=35 Identities=26% Similarity=0.325 Sum_probs=32.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKS 85 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~ 85 (429)
...+||+|||||++|+++|..|++.|++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 34689999999999999999999999999999984
No 262
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.49 E-value=1.1e-07 Score=92.50 Aligned_cols=36 Identities=22% Similarity=0.368 Sum_probs=32.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHC--CCcEEEEcCCC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKK--GAAVTLIEKSS 86 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~--G~~V~lie~~~ 86 (429)
+..+||+|||||++|+++|..|+++ |.+|+|||+.+
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~ 46 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDP 46 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSS
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 3468999999999999999999887 89999999986
No 263
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.48 E-value=1.1e-07 Score=93.34 Aligned_cols=34 Identities=24% Similarity=0.269 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHH-CCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAK-KGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~-~G~~V~lie~~~ 86 (429)
++|+||||||.+|+.+|..|++ .|.+|+|||++.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~ 36 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGV 36 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCC
Confidence 5899999999999999999999 799999999986
No 264
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.45 E-value=1.3e-06 Score=91.59 Aligned_cols=34 Identities=29% Similarity=0.478 Sum_probs=32.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.+||+|||||++|+++|..|++.|++|+|||+++
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~ 161 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERA 161 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 5799999999999999999999999999999987
No 265
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.44 E-value=2.6e-07 Score=88.68 Aligned_cols=34 Identities=15% Similarity=0.031 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCc-EEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAA-VTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~-V~lie~~~ 86 (429)
..+|+|||+|.+|+.+|..|++.|.+ |+++++..
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 46899999999999999999999999 99999876
No 266
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.43 E-value=9.5e-08 Score=96.77 Aligned_cols=36 Identities=33% Similarity=0.391 Sum_probs=33.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...+||+|||||++|+++|+.|+++|++|+|||+..
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~ 424 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGR 424 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 456899999999999999999999999999999987
No 267
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.42 E-value=1.9e-07 Score=89.43 Aligned_cols=35 Identities=29% Similarity=0.400 Sum_probs=31.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
...+|+|||||.+|+.+|..+.+.|. +|+++++..
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 35689999999999999999999998 599999876
No 268
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.39 E-value=9e-07 Score=84.52 Aligned_cols=32 Identities=19% Similarity=0.277 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHHCC--CcEEEEcCCC
Q 014198 55 HVAVCGGGIIGVCTAYFLAKKG--AAVTLIEKSS 86 (429)
Q Consensus 55 dvvIIGaGi~Gl~~A~~L~~~G--~~V~lie~~~ 86 (429)
+|+|||||++|+++|..|++.| .+|+|||+++
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCC
Confidence 6999999999999999999988 5799999986
No 269
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.39 E-value=3.4e-06 Score=82.08 Aligned_cols=35 Identities=20% Similarity=0.241 Sum_probs=33.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|++|||+|.+|+.+|..|++.|++|+|||++.
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 38 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQ 38 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 46899999999999999999999999999999987
No 270
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.38 E-value=6.7e-07 Score=94.34 Aligned_cols=33 Identities=27% Similarity=0.204 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
.+|+|||||.+|+.+|..|++.|. +|+++++..
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 489999999999999999999996 899999876
No 271
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.36 E-value=7e-06 Score=79.73 Aligned_cols=58 Identities=21% Similarity=0.168 Sum_probs=42.9
Q ss_pred ehHHHHHHHHHHHHhhcCcEEEEce-EEEEEEccCC------cEEEEEEeCC-----eEEEcCEEEEcCCC
Q 014198 187 HPQLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGG------RVESVMIEGG-----RVVESDAVVLALGP 245 (429)
Q Consensus 187 ~~~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g------~v~~v~~~~g-----~~i~ad~vV~a~G~ 245 (429)
...++..+|...+ ++.+..+.+++ |++++..+++ ..+.|++.++ .++.|+.||+|+|.
T Consensus 143 ~r~E~~~Yl~~~A-~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 143 ARLEFEDYMRWCA-QQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp BHHHHHHHHHHHH-HTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred CHHHHHHHHHHHH-HHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 3456777777777 67778899999 9999875322 2466777543 46899999999995
No 272
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.31 E-value=7.2e-07 Score=88.29 Aligned_cols=35 Identities=29% Similarity=0.403 Sum_probs=33.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-CCCcEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAK-KGAAVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~-~G~~V~lie~~~ 86 (429)
..+|++|||+|.+|+.+|..|++ .|.+|+|||++.
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~ 58 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGF 58 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 46899999999999999999999 899999999987
No 273
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.29 E-value=2.6e-07 Score=97.46 Aligned_cols=34 Identities=32% Similarity=0.537 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
.+||+|||||++|+++|..|+++|+ +|+|+|+.+
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~ 221 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQE 221 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 5799999999999999999999999 799999986
No 274
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.26 E-value=9.1e-07 Score=89.31 Aligned_cols=35 Identities=40% Similarity=0.527 Sum_probs=33.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+||+|||||++|+++|..|+++|++|+|||+.+
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~ 406 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHS 406 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 46799999999999999999999999999999987
No 275
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.23 E-value=2.7e-07 Score=88.53 Aligned_cols=34 Identities=26% Similarity=0.272 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHH-C------CCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAK-K------GAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~-~------G~~V~lie~~~ 86 (429)
.+||+|||||++|+++|..|++ . |++|+|||+.+
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~ 43 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLP 43 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCC
Confidence 4799999999999999999999 7 99999999986
No 276
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.22 E-value=8.1e-07 Score=81.44 Aligned_cols=38 Identities=32% Similarity=0.463 Sum_probs=33.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH--CCCcEEEEcCCC-Ccc
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAK--KGAAVTLIEKSS-VAC 89 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~--~G~~V~lie~~~-~~~ 89 (429)
.++||+|||||++|+++|++|++ .|++|+|+||.. +++
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG 104 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCT
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCc
Confidence 35799999999999999999975 599999999987 443
No 277
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.21 E-value=2.5e-06 Score=79.02 Aligned_cols=33 Identities=24% Similarity=0.269 Sum_probs=30.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|+|||+|..|+.+|..|++.| +|+++.+..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 468999999999999999999998 799998874
No 278
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.20 E-value=3.4e-07 Score=87.91 Aligned_cols=35 Identities=34% Similarity=0.426 Sum_probs=32.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC--CcEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKG--AAVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G--~~V~lie~~~ 86 (429)
..+||+|||||++|+++|..|++.| ++|+|||+.+
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~ 41 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQL 41 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 3579999999999999999999998 9999999987
No 279
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.19 E-value=1.2e-06 Score=82.94 Aligned_cols=51 Identities=14% Similarity=0.167 Sum_probs=41.6
Q ss_pred HHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHH
Q 014198 194 TLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFE 251 (429)
Q Consensus 194 ~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~ 251 (429)
.+.+.+ ++.|++++.++ |++++.+ .|.+++|+++.+|.||+|+|...+.++
T Consensus 223 ~~~~~l-~~~gV~~~~~~~v~~i~~~------~v~~~~g~~~~~D~vi~a~G~~~~~~l 274 (409)
T 3h8l_A 223 AVASIY-NQLGIKLVHNFKIKEIREH------EIVDEKGNTIPADITILLPPYTGNPAL 274 (409)
T ss_dssp HHHHHH-HHHTCEEECSCCEEEECSS------EEEETTSCEEECSEEEEECCEECCHHH
T ss_pred HHHHHH-HHCCCEEEcCCceEEECCC------eEEECCCCEEeeeEEEECCCCCccHHH
Confidence 566667 77899999999 9999643 267778889999999999998776554
No 280
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.14 E-value=2.8e-06 Score=82.49 Aligned_cols=39 Identities=36% Similarity=0.604 Sum_probs=35.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC-Ccc
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS-VAC 89 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~-~~~ 89 (429)
+..+||+|||||++|+++|+.|+++|++|+|+|+.. +++
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG 48 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGG 48 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCC
Confidence 456799999999999999999999999999999998 444
No 281
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.11 E-value=2.8e-06 Score=78.67 Aligned_cols=39 Identities=28% Similarity=0.544 Sum_probs=35.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCC-C-Ccc
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKS-S-VAC 89 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~-~-~~~ 89 (429)
...+||+|||||++|+++|+.|+++|++|+|+|+. . +|+
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGG 82 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGG 82 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBT
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCC
Confidence 34679999999999999999999999999999998 6 544
No 282
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.11 E-value=2.5e-06 Score=80.38 Aligned_cols=40 Identities=23% Similarity=0.376 Sum_probs=35.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC-CCcEEEEcCCC-Ccccc
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKK-GAAVTLIEKSS-VACAA 91 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~-G~~V~lie~~~-~~~~~ 91 (429)
..+||+|||||++|+++|+.|+++ |++|+|+|+++ +|+.+
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~ 47 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNA 47 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCee
Confidence 468999999999999999999999 99999999997 55543
No 283
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.10 E-value=3.2e-06 Score=80.51 Aligned_cols=38 Identities=24% Similarity=0.543 Sum_probs=34.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC-CcEEEEcCCC-Ccc
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKG-AAVTLIEKSS-VAC 89 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G-~~V~lie~~~-~~~ 89 (429)
..+||+|||||++|+++|+.|+++| ++|+|+|+.+ +|+
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG 44 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGG 44 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSST
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCC
Confidence 4679999999999999999999999 9999999987 554
No 284
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.10 E-value=3e-06 Score=79.22 Aligned_cols=41 Identities=22% Similarity=0.336 Sum_probs=36.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC-Ccccc
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS-VACAA 91 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~-~~~~~ 91 (429)
...+||+|||||++|+++|+.|+++|++|+|+|+.+ +|+.+
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~ 68 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNA 68 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGG
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCcc
Confidence 456899999999999999999999999999999987 55433
No 285
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.06 E-value=2.3e-06 Score=83.68 Aligned_cols=38 Identities=32% Similarity=0.463 Sum_probs=34.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC-CcEEEEcCCC-Cccc
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKG-AAVTLIEKSS-VACA 90 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G-~~V~lie~~~-~~~~ 90 (429)
.+||+|||||++||++|+.|+++| ++|+|+|+.+ +|+.
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr 47 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGR 47 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTT
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCc
Confidence 579999999999999999999999 9999999998 6553
No 286
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.99 E-value=0.00011 Score=72.19 Aligned_cols=34 Identities=24% Similarity=0.392 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|+|||+|.+|+.+|..|++.|.+|+++++.+
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~ 219 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTP 219 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CCEEEEECCCccHHHHHHHHhhcCceEEEEEcCC
Confidence 5689999999999999999999999999999876
No 287
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.96 E-value=2.7e-05 Score=75.59 Aligned_cols=34 Identities=29% Similarity=0.279 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKK--GAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~--G~~V~lie~~~ 86 (429)
.++|+|||+|-.|+.++..|++. +.+|+++-|..
T Consensus 246 gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 246 PYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred CcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 56899999999999999999875 78999998875
No 288
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.96 E-value=5.6e-06 Score=79.54 Aligned_cols=38 Identities=34% Similarity=0.508 Sum_probs=34.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC-Cccc
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS-VACA 90 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~-~~~~ 90 (429)
.+||+|||||++|+++|+.|+++|++|+|+|+.. +++.
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~ 43 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGR 43 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCc
Confidence 5799999999999999999999999999999987 5543
No 289
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.96 E-value=6.1e-06 Score=80.45 Aligned_cols=38 Identities=39% Similarity=0.557 Sum_probs=34.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC-Ccc
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS-VAC 89 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~-~~~ 89 (429)
..+||+|||||++|+++|+.|+++|++|+|+|+.+ +|+
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG 50 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGG 50 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCC
Confidence 45899999999999999999999999999999998 544
No 290
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.95 E-value=5.8e-06 Score=76.97 Aligned_cols=37 Identities=27% Similarity=0.372 Sum_probs=33.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC-Cccc
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS-VACA 90 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~-~~~~ 90 (429)
+||+|||||++|+++|+.|+++|++|+|+|++. +|+.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~ 39 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGN 39 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGG
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcc
Confidence 689999999999999999999999999999987 5543
No 291
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.91 E-value=7.5e-06 Score=78.20 Aligned_cols=51 Identities=16% Similarity=0.059 Sum_probs=35.6
Q ss_pred HHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEE--eC-----CeEEEcCEEEEcCCCCchH
Q 014198 194 TLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMI--EG-----GRVVESDAVVLALGPWSGK 249 (429)
Q Consensus 194 ~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~--~~-----g~~i~ad~vV~a~G~~s~~ 249 (429)
.+.+.+ ++.|+++++++ |++++.+ .+. +.. .+ +.++.+|.+|+|+|.....
T Consensus 213 ~~~~~l-~~~gI~~~~~~~v~~v~~~---~v~-~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~ 271 (437)
T 3sx6_A 213 ILTKGL-KEEGIEAYTNCKVTKVEDN---KMY-VTQVDEKGETIKEMVLPVKFGMMIPAFKGVP 271 (437)
T ss_dssp HHHHHH-HHTTCEEECSEEEEEEETT---EEE-EEEECTTSCEEEEEEEECSEEEEECCEECCH
T ss_pred HHHHHH-HHCCCEEEcCCEEEEEECC---eEE-EEecccCCccccceEEEEeEEEEcCCCcCch
Confidence 556666 78899999999 9999732 221 221 12 5679999999999954443
No 292
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.90 E-value=1.4e-05 Score=77.38 Aligned_cols=41 Identities=20% Similarity=0.225 Sum_probs=35.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC-CcEEEEcCCC-Cccccc
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKG-AAVTLIEKSS-VACAAS 92 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G-~~V~lie~~~-~~~~~s 92 (429)
..+||+|||||++|+++|+.|+++| .+|+|+|+.+ +|+...
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~ 50 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSR 50 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGC
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeee
Confidence 4689999999999999999999999 8999999997 655443
No 293
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.87 E-value=1e-05 Score=78.71 Aligned_cols=38 Identities=39% Similarity=0.651 Sum_probs=34.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC-Ccc
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS-VAC 89 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~-~~~ 89 (429)
..+||+|||||++|+++|+.|+++|++|+|+|+.. +++
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg 70 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGG 70 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCC
Confidence 46799999999999999999999999999999987 544
No 294
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.85 E-value=1.4e-05 Score=74.73 Aligned_cols=37 Identities=27% Similarity=0.509 Sum_probs=33.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC-Ccc
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS-VAC 89 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~-~~~ 89 (429)
.+||+|||||++|+++|+.|+++|++|+|+|++. +++
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG 40 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGG 40 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCC
Confidence 3699999999999999999999999999999987 544
No 295
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.64 E-value=4.4e-05 Score=73.96 Aligned_cols=53 Identities=23% Similarity=0.220 Sum_probs=41.0
Q ss_pred hhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchH-HH-hhhc
Q 014198 201 NDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGK-FE-LLAS 255 (429)
Q Consensus 201 ~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~-~~-~~~~ 255 (429)
++.|+++++++ |+++..+ +++..+.+.++.++.+|.||+|+|.+++. ++ .++.
T Consensus 268 ~~~GV~v~~~~~v~~i~~~--~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~ 323 (493)
T 1y56_A 268 ERWGIDYVHIPNVKRVEGN--EKVERVIDMNNHEYKVDALIFADGRRPDINPITQAGG 323 (493)
T ss_dssp HHHTCEEEECSSEEEEECS--SSCCEEEETTCCEEECSEEEECCCEEECCHHHHHTTC
T ss_pred HhCCcEEEeCCeeEEEecC--CceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCC
Confidence 44599999999 9999854 34556777778899999999999988775 43 4443
No 296
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.64 E-value=3.7e-05 Score=75.63 Aligned_cols=58 Identities=19% Similarity=0.296 Sum_probs=43.6
Q ss_pred HHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeC---Ce--EE---EcCEEEEcCCCCc-hHHH
Q 014198 193 KTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEG---GR--VV---ESDAVVLALGPWS-GKFE 251 (429)
Q Consensus 193 ~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~---g~--~i---~ad~vV~a~G~~s-~~~~ 251 (429)
.++++.++++.|++|+.++ |++|..+ ++++.+|++.+ |+ ++ .+|.||+|+|++. ..++
T Consensus 199 ~~~l~~~~~~~~~~i~~~~~V~~i~~~-~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL 266 (546)
T 1kdg_A 199 ATYLQTALARPNFTFKTNVMVSNVVRN-GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRIL 266 (546)
T ss_dssp HTHHHHHHTCTTEEEECSCCEEEEEEE-TTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHH
T ss_pred HHHHHHHhhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHH
Confidence 3455556244699999999 9999987 77888998864 42 33 7899999999975 4444
No 297
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.64 E-value=4.6e-05 Score=73.52 Aligned_cols=56 Identities=18% Similarity=0.143 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHhhc--------CcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCc
Q 014198 189 QLFTKTLLNKAVNDY--------GLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWS 247 (429)
Q Consensus 189 ~~l~~~l~~~~~~~~--------Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s 247 (429)
..+.+.|.+.+ .+. |++|++++ |++|..+ ++.+. |++.+|.+++||.||+|++.+.
T Consensus 206 ~~l~~~l~~~l-~~~~~~~~~i~~~~i~~~~~V~~i~~~-~~~v~-v~~~~g~~~~ad~vI~a~~~~~ 270 (472)
T 1b37_A 206 EAVVYYLAGQY-LKTDDKSGKIVDPRLQLNKVVREIKYS-PGGVT-VKTEDNSVYSADYVMVSASLGV 270 (472)
T ss_dssp THHHHHHHHTT-SCBCTTTCCBCCTTEESSCCEEEEEEC-SSCEE-EEETTSCEEEESEEEECSCHHH
T ss_pred HHHHHHHHHhc-cccccccccccccEEEcCCEEEEEEEc-CCcEE-EEECCCCEEEcCEEEEecCHHH
Confidence 36777777776 443 68999999 9999987 55554 8888888999999999999654
No 298
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.58 E-value=8.6e-05 Score=75.50 Aligned_cols=37 Identities=27% Similarity=0.380 Sum_probs=33.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCCC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSSV 87 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~~ 87 (429)
...+||+|||||++|+++|+.|+++|++|+|+|+.+.
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~ 423 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEK 423 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 3467999999999999999999999999999999873
No 299
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.57 E-value=2.3e-05 Score=74.70 Aligned_cols=51 Identities=8% Similarity=0.062 Sum_probs=38.4
Q ss_pred HHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeC----CeEEEcCEEEEcCCCCchHHH
Q 014198 194 TLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEG----GRVVESDAVVLALGPWSGKFE 251 (429)
Q Consensus 194 ~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~----g~~i~ad~vV~a~G~~s~~~~ 251 (429)
.+.+.+ ++.||++++++ |++++.+ . +++.+ +.++.+|.||+|+|......+
T Consensus 205 ~l~~~l-~~~GV~i~~~~~v~~v~~~---~---v~~~~~~~~g~~i~~D~vv~a~G~~~~~~l 260 (430)
T 3h28_A 205 LVEDLF-AERNIDWIANVAVKAIEPD---K---VIYEDLNGNTHEVPAKFTMFMPSFQGPEVV 260 (430)
T ss_dssp HHHHHH-HHTTCEEECSCEEEEECSS---E---EEEECTTSCEEEEECSEEEEECEEECCHHH
T ss_pred HHHHHH-HHCCCEEEeCCEEEEEeCC---e---EEEEecCCCceEEeeeEEEECCCCccchhH
Confidence 566666 78899999999 9999632 2 34444 678999999999997655443
No 300
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.52 E-value=8e-05 Score=74.88 Aligned_cols=39 Identities=31% Similarity=0.442 Sum_probs=35.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC-Ccc
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS-VAC 89 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~-~~~ 89 (429)
...+||+|||||++|+++|+.|+++|++|+|+|+.+ +|+
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 144 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBT
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 346799999999999999999999999999999987 443
No 301
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.51 E-value=8.8e-05 Score=76.06 Aligned_cols=38 Identities=32% Similarity=0.448 Sum_probs=34.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC-Ccc
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS-VAC 89 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~-~~~ 89 (429)
..++|+|||||++|+++|+.|+++|++|+|+|+.. +|+
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG 315 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 315 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCC
Confidence 46799999999999999999999999999999987 543
No 302
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.32 E-value=0.00027 Score=69.65 Aligned_cols=55 Identities=11% Similarity=0.127 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHhhcCcEEEEce-EEEEEEccC-CcEEEEEEeCCeEEEcCEEEEcCC
Q 014198 189 QLFTKTLLNKAVNDYGLEVVIGK-VERVGVGEG-GRVESVMIEGGRVVESDAVVLALG 244 (429)
Q Consensus 189 ~~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~-g~v~~v~~~~g~~i~ad~vV~a~G 244 (429)
..+.++|.+.+ +..|+++++++ |.+|..+++ +++.+|.+.+|++++||.||....
T Consensus 378 g~L~qaL~r~~-~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~ 434 (650)
T 1vg0_A 378 GELPQCFCRMC-AVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDS 434 (650)
T ss_dssp THHHHHHHHHH-HHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGG
T ss_pred hHHHHHHHHHH-HHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChh
Confidence 67889999999 88999999999 999988733 888888877789999999988544
No 303
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.28 E-value=0.00024 Score=69.05 Aligned_cols=36 Identities=22% Similarity=0.327 Sum_probs=33.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...+|++|||+|.+|+.+|..|++.|.+|+|||++.
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 44 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGR 44 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCC
Confidence 346899999999999999999999999999999986
No 304
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.22 E-value=3.3e-05 Score=72.85 Aligned_cols=49 Identities=16% Similarity=0.115 Sum_probs=39.5
Q ss_pred hhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCchHHH
Q 014198 201 NDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWSGKFE 251 (429)
Q Consensus 201 ~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s~~~~ 251 (429)
++.|++++.++ +..++.+.+. ..+.+.+|+++.+|.|++|+|.....+.
T Consensus 213 ~~~gi~v~~~~~v~~v~~~~~~--~~v~~~~g~~i~~D~vi~~~g~~~~~~~ 262 (401)
T 3vrd_B 213 ENALIEWHPGPDAAVVKTDTEA--MTVETSFGETFKAAVINLIPPQRAGKIA 262 (401)
T ss_dssp TTCSEEEECTTTTCEEEEETTT--TEEEETTSCEEECSEEEECCCEEECHHH
T ss_pred HhcCcEEEeCceEEEEEecccc--eEEEcCCCcEEEeeEEEEecCcCCchhH
Confidence 67799999999 9998876333 3478888999999999999997666554
No 305
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.19 E-value=1.9e-05 Score=75.15 Aligned_cols=53 Identities=6% Similarity=-0.044 Sum_probs=38.1
Q ss_pred HHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeC--CeEEEcCEEEEcCCCCchHHH
Q 014198 194 TLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEG--GRVVESDAVVLALGPWSGKFE 251 (429)
Q Consensus 194 ~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~--g~~i~ad~vV~a~G~~s~~~~ 251 (429)
.+.+.+ ++.|+++++++ |++++. +++ .+...+ ++++.+|.+|+|+|...+.+.
T Consensus 205 ~l~~~l-~~~GV~~~~~~~v~~v~~---~~~-~~~~~~g~~~~i~~d~vi~~~G~~~~~~~ 260 (430)
T 3hyw_A 205 LVEDLF-AERNIDWIANVAVKAIEP---DKV-IYEDLNGNTHEVPAKFTMFMPSFQGPEVV 260 (430)
T ss_dssp HHHHHH-HHTTCEEECSCEEEEECS---SEE-EEECTTSCEEEEECSEEEEECEEECCHHH
T ss_pred HHHHHH-HhCCeEEEeCceEEEEeC---Cce-EEEeeCCCceEeecceEEEeccCCCchHH
Confidence 455566 78899999999 999863 332 123223 358999999999997766555
No 306
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.17 E-value=0.00016 Score=72.23 Aligned_cols=34 Identities=26% Similarity=0.491 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC--------CcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKG--------AAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G--------~~V~lie~~~ 86 (429)
..+|+|||||++|+++|+.|+++| ++|+|+|+.+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~ 97 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADP 97 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccC
Confidence 468999999999999999999998 9999999986
No 307
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.74 E-value=0.0027 Score=49.78 Aligned_cols=36 Identities=22% Similarity=0.242 Sum_probs=33.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
+...+|+|||+|..|..+|..|.+.|++|+++|+++
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 345689999999999999999999999999999987
No 308
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.46 E-value=0.0035 Score=50.07 Aligned_cols=35 Identities=23% Similarity=0.450 Sum_probs=32.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
....|+|||+|..|..+|..|.+.|++|+++++..
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 34689999999999999999999999999999875
No 309
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.39 E-value=0.0042 Score=48.64 Aligned_cols=34 Identities=26% Similarity=0.285 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...|+|+|+|..|..+|..|.++|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999976
No 310
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.34 E-value=0.0043 Score=48.35 Aligned_cols=33 Identities=27% Similarity=0.407 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.+|+|||+|..|..+|..|.+.|++|+++|+..
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999875
No 311
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.24 E-value=0.0064 Score=48.40 Aligned_cols=34 Identities=35% Similarity=0.610 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+++|+|+|..|..+|..|.+.|++|+++|+.+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3579999999999999999999999999999974
No 312
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.12 E-value=0.0061 Score=45.82 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC-CcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKG-AAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G-~~V~lie~~~ 86 (429)
..+|+|+|+|..|..++..|.+.| ++|+++++..
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 457999999999999999999999 9999999875
No 313
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.72 E-value=0.01 Score=53.31 Aligned_cols=34 Identities=26% Similarity=0.434 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|.|||+|..|...|..++..|++|+|+|..+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4579999999999999999999999999999876
No 314
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.70 E-value=0.011 Score=46.14 Aligned_cols=33 Identities=27% Similarity=0.299 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.+|+|+|+|..|..+|..|.+.|++|+++++..
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999865
No 315
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.57 E-value=0.016 Score=49.10 Aligned_cols=32 Identities=22% Similarity=0.293 Sum_probs=30.6
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 55 HVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 55 dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
+|+|||+|..|..+|..|.++|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999999999999986
No 316
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.51 E-value=0.014 Score=47.96 Aligned_cols=34 Identities=26% Similarity=0.224 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC-CCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKK-GAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~-G~~V~lie~~~ 86 (429)
..+|+|||+|..|..+|..|.+. |++|+++|++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 45799999999999999999999 99999999986
No 317
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.42 E-value=0.018 Score=51.57 Aligned_cols=33 Identities=39% Similarity=0.699 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.+|.|||+|..|..+|..|++.|++|+++|+..
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999876
No 318
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.39 E-value=0.018 Score=50.99 Aligned_cols=33 Identities=33% Similarity=0.454 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.+|.|||+|..|..+|..|++.|++|+++|+..
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 579999999999999999999999999999876
No 319
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.27 E-value=0.018 Score=52.03 Aligned_cols=33 Identities=33% Similarity=0.538 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.+|+|||+|-.|...|..|++.|++|++++|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 479999999999999999999999999999875
No 320
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.23 E-value=0.019 Score=48.57 Aligned_cols=34 Identities=29% Similarity=0.447 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...|+|||||-+|...|..|.+.|.+|+|+++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 5689999999999999999999999999999865
No 321
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.11 E-value=0.014 Score=55.64 Aligned_cols=34 Identities=21% Similarity=0.374 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|+|+|+|-.|..+|..|.+.|++|++||+++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3579999999999999999999999999999987
No 322
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.04 E-value=0.02 Score=51.62 Aligned_cols=33 Identities=21% Similarity=0.507 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.+|+|||+|-.|...|..|++.|++|++++|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 479999999999999999999999999999865
No 323
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=95.00 E-value=0.035 Score=52.48 Aligned_cols=34 Identities=26% Similarity=0.459 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|.|||+|..|..+|..|++.|++|+++|+.+
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 3579999999999999999999999999999876
No 324
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.93 E-value=0.03 Score=50.81 Aligned_cols=34 Identities=32% Similarity=0.505 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
..+|+|||+|..|..+|..|++.|+ +|+|+|...
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 4589999999999999999999998 999999876
No 325
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.85 E-value=0.017 Score=50.60 Aligned_cols=34 Identities=29% Similarity=0.559 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...|+|||||-+|...|..|.+.|.+|+||++..
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 5689999999999999999999999999999764
No 326
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.82 E-value=0.029 Score=50.54 Aligned_cols=34 Identities=26% Similarity=0.434 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|.|||+|..|.+.|..|+++|++|+++|+.+
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999986
No 327
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.80 E-value=0.029 Score=50.60 Aligned_cols=34 Identities=32% Similarity=0.558 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
..+|.|||+|..|..+|..|++.|+ +|+++|+..
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 4579999999999999999999998 999999875
No 328
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.68 E-value=0.037 Score=46.50 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|.|||+|..|.++|..|++.|++|+++++..
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~ 52 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKD 52 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4579999999999999999999999999999875
No 329
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=94.57 E-value=0.037 Score=49.12 Aligned_cols=34 Identities=29% Similarity=0.351 Sum_probs=31.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.+..|.|||+|..|...|..|+ +|++|+++|+.+
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 3578999999999999999999 999999999986
No 330
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=94.52 E-value=0.027 Score=50.19 Aligned_cols=33 Identities=33% Similarity=0.456 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.+|+|||+|-.|...|..|++.|.+|++++|..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 479999999999999999999999999999875
No 331
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=94.51 E-value=0.032 Score=48.32 Aligned_cols=34 Identities=26% Similarity=0.499 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
..+|+|||+|-.|..+|..|++.|. +++|+|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 4689999999999999999999997 899999986
No 332
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.51 E-value=0.038 Score=52.85 Aligned_cols=35 Identities=23% Similarity=0.406 Sum_probs=32.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...+|.|||+|..|+.+|..|++.|++|+++|+..
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 35689999999999999999999999999999864
No 333
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=94.41 E-value=0.042 Score=48.70 Aligned_cols=32 Identities=25% Similarity=0.268 Sum_probs=30.3
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 55 HVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 55 dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
+|.|||+|..|...|..|++.|++|+++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 58999999999999999999999999999875
No 334
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.33 E-value=0.046 Score=49.72 Aligned_cols=32 Identities=22% Similarity=0.461 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKS 85 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~ 85 (429)
.+|.|||+|..|...|..|++.|++|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 47999999999999999999999999999974
No 335
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.32 E-value=0.027 Score=44.14 Aligned_cols=34 Identities=15% Similarity=0.275 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...|+|||+|..|..+|..|.+.|.+|+++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4589999999999999999999999999999876
No 336
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=94.29 E-value=0.045 Score=49.38 Aligned_cols=34 Identities=26% Similarity=0.481 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA--AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~--~V~lie~~~ 86 (429)
..+|+|||+|-.|..+|..|++.|+ +|+++++..
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3589999999999999999999998 999999875
No 337
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=94.27 E-value=0.045 Score=49.19 Aligned_cols=33 Identities=30% Similarity=0.526 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.+|.|||+|..|...|..|++.|++|+++++..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 479999999999999999999999999999875
No 338
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.27 E-value=0.051 Score=49.80 Aligned_cols=34 Identities=38% Similarity=0.515 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|.|||+|..|..+|..|++.|++|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4589999999999999999999999999999976
No 339
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.27 E-value=0.045 Score=51.94 Aligned_cols=33 Identities=33% Similarity=0.495 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.+|.|||+|..|+.+|..|++.|++|+++|+..
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 479999999999999999999999999999875
No 340
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=94.23 E-value=0.096 Score=51.71 Aligned_cols=39 Identities=23% Similarity=0.207 Sum_probs=36.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC-Ccc
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS-VAC 89 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~-~~~ 89 (429)
..++||+|||+|+.|+.+|..|++.|++|++|||+. +|+
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg 45 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGG 45 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccC
Confidence 457999999999999999999999999999999999 554
No 341
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.21 E-value=0.054 Score=48.66 Aligned_cols=35 Identities=29% Similarity=0.357 Sum_probs=32.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...+|.|||.|..|..+|..|++.|++|+++++..
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 34689999999999999999999999999999876
No 342
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.09 E-value=0.052 Score=49.84 Aligned_cols=33 Identities=36% Similarity=0.326 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.+|.|||+|..|...|..|++.|++|+++++..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999999875
No 343
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.08 E-value=0.062 Score=48.45 Aligned_cols=34 Identities=26% Similarity=0.474 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
..+|.|||+|..|..+|..|+..|+ +|+|+|...
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 3579999999999999999999998 999999875
No 344
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.04 E-value=0.066 Score=50.23 Aligned_cols=35 Identities=26% Similarity=0.245 Sum_probs=32.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...+|.|||.|.+|+.+|..|+++|++|+.+|.+.
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 35689999999999999999999999999999875
No 345
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.04 E-value=0.061 Score=49.74 Aligned_cols=34 Identities=21% Similarity=0.322 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|+|||+|.+|+.+|..|...|.+|+++|+..
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999987
No 346
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=94.00 E-value=0.054 Score=48.56 Aligned_cols=32 Identities=28% Similarity=0.607 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.+|+|||+|-.|...|..|+ .|.+|++++|..
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 47999999999999999999 999999999875
No 347
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.00 E-value=0.047 Score=51.91 Aligned_cols=34 Identities=38% Similarity=0.377 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|+|||.|.+|+++|..|.++|++|++.|+..
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 4689999999999999999999999999999865
No 348
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=93.99 E-value=0.056 Score=49.15 Aligned_cols=36 Identities=28% Similarity=0.380 Sum_probs=32.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.++.+|.|||+|..|...|..|++.|++|+++++..
T Consensus 12 ~~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 12 HMEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred ccCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 456799999999999999999999999999999875
No 349
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=93.94 E-value=0.062 Score=50.74 Aligned_cols=35 Identities=20% Similarity=0.438 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...++.|||.|..|+.+|..|++.|++|+++++..
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~ 41 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDA 41 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35789999999999999999999999999999986
No 350
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=93.92 E-value=0.043 Score=48.96 Aligned_cols=34 Identities=18% Similarity=0.149 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|.|||.|..|..+|..|++.|++|+++++.+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4589999999999999999999999999999876
No 351
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=93.90 E-value=0.067 Score=48.40 Aligned_cols=34 Identities=26% Similarity=0.486 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
..+|.|||+|..|..+|..|+..|+ +|+++|...
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 3589999999999999999999998 999999876
No 352
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.88 E-value=0.062 Score=50.29 Aligned_cols=34 Identities=21% Similarity=0.372 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|+|||.|-.|..+|..|.+.|++|++||+++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3579999999999999999999999999999986
No 353
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=93.87 E-value=0.061 Score=45.98 Aligned_cols=34 Identities=21% Similarity=0.226 Sum_probs=31.2
Q ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGG-GIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGa-Gi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...|+|.|| |.+|..++..|.++|++|+++.|..
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 457999997 9999999999999999999999876
No 354
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.85 E-value=0.041 Score=52.13 Aligned_cols=34 Identities=21% Similarity=0.452 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|+|||.|.+|+++|..|+++|++|++.|...
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~ 38 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRM 38 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCC
Confidence 3579999999999999999999999999999876
No 355
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.80 E-value=0.06 Score=51.24 Aligned_cols=34 Identities=26% Similarity=0.352 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC-CC-cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKK-GA-AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~-G~-~V~lie~~~ 86 (429)
..+|.|||+|..|+.+|..|++. |+ +|+++|+..
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNS 53 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 45899999999999999999999 99 999999886
No 356
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.75 E-value=0.09 Score=47.37 Aligned_cols=33 Identities=33% Similarity=0.501 Sum_probs=29.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|.|||+|-.|...|..|++.|++|+++ +..
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 468999999999999999999999999999 654
No 357
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=93.70 E-value=0.083 Score=51.08 Aligned_cols=58 Identities=26% Similarity=0.291 Sum_probs=42.9
Q ss_pred HHHHHHHhhcCcEEEEce-EEEEEEccCC-cEEEEEEe--CC-----eEEEcCEEEEcCCCC-chHHH
Q 014198 194 TLLNKAVNDYGLEVVIGK-VERVGVGEGG-RVESVMIE--GG-----RVVESDAVVLALGPW-SGKFE 251 (429)
Q Consensus 194 ~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g-~v~~v~~~--~g-----~~i~ad~vV~a~G~~-s~~~~ 251 (429)
.++..+++..+++|+.++ |++|..++++ ++++|++. +| .+++|+.||+|+|++ +..++
T Consensus 231 ~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~lL 298 (507)
T 1coy_A 231 TYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLL 298 (507)
T ss_dssp THHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHH
T ss_pred HHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHHH
Confidence 444555244469999999 9999987435 68888875 34 368899999999998 55555
No 358
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.69 E-value=0.058 Score=49.47 Aligned_cols=34 Identities=21% Similarity=0.188 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|+|||+|.+|..+|..|...|.+|+++|+..
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5689999999999999999999999999999986
No 359
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=93.67 E-value=0.089 Score=50.12 Aligned_cols=34 Identities=29% Similarity=0.372 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|.|||+|..|..+|..|+++|++|+++|+..
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3479999999999999999999999999999875
No 360
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.63 E-value=0.078 Score=45.75 Aligned_cols=35 Identities=31% Similarity=0.365 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...+|.|||+|..|..+|..|++.|++|+++++..
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 35689999999999999999999999999999875
No 361
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=93.55 E-value=0.082 Score=50.56 Aligned_cols=38 Identities=24% Similarity=0.441 Sum_probs=33.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC-Ccc
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS-VAC 89 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~-~~~ 89 (429)
..+||+|||||++|+++|+.|++.|+ +|+|+|+.. +++
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg 42 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGG 42 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCC
Confidence 46799999999999999999999998 899999987 544
No 362
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=93.54 E-value=0.079 Score=47.40 Aligned_cols=34 Identities=21% Similarity=0.233 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|.|||.|..|..+|..|++.|++|+++++..
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4579999999999999999999999999999876
No 363
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.52 E-value=0.076 Score=47.48 Aligned_cols=32 Identities=28% Similarity=0.650 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014198 55 HVAVCGGGIIGVCTAYFLAKKGA--AVTLIEKSS 86 (429)
Q Consensus 55 dvvIIGaGi~Gl~~A~~L~~~G~--~V~lie~~~ 86 (429)
+|+|||+|..|..+|..|+..|+ +|+++|...
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 69999999999999999999998 999999875
No 364
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=93.50 E-value=0.075 Score=47.10 Aligned_cols=33 Identities=33% Similarity=0.485 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.+|.|||.|..|..+|..|++.|++|+++++..
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 369999999999999999999999999999876
No 365
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=93.49 E-value=0.088 Score=44.40 Aligned_cols=34 Identities=21% Similarity=0.221 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|.|||+|..|...|..|++.|++|+++++..
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999875
No 366
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=93.42 E-value=0.12 Score=45.32 Aligned_cols=34 Identities=18% Similarity=0.157 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...++|+|+|-+|..+|..|++.|.+|++++|..
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4579999999999999999999999999999875
No 367
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.39 E-value=0.081 Score=47.87 Aligned_cols=34 Identities=21% Similarity=0.138 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHH-HHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVC-TAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~-~A~~L~~~G~~V~lie~~~ 86 (429)
..+|.|||.|.+|++ +|..|.++|++|++.|+..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 457999999999997 8899999999999999876
No 368
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=93.30 E-value=0.089 Score=48.37 Aligned_cols=33 Identities=33% Similarity=0.620 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..|+|+|||..|..+|+.+.+.|++|+++|.++
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~ 34 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNP 34 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 479999999999999999999999999999876
No 369
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=93.29 E-value=0.085 Score=50.42 Aligned_cols=33 Identities=36% Similarity=0.461 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.+|.|||+|..|..+|..|+++|++|+++|+..
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999876
No 370
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=93.27 E-value=0.082 Score=49.53 Aligned_cols=33 Identities=15% Similarity=0.393 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|.|||.|..|+.+|..|++ |++|+++|+.+
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 3589999999999999999998 99999999876
No 371
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.14 E-value=0.11 Score=45.77 Aligned_cols=33 Identities=27% Similarity=0.406 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..|+|.|+|.+|..++..|.++|++|+++.+..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 479999999999999999999999999999875
No 372
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=93.12 E-value=0.11 Score=46.68 Aligned_cols=33 Identities=39% Similarity=0.666 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKS 85 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~ 85 (429)
..+|.|||+|..|..+|+.|+..|+ +|+++|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4579999999999999999999999 99999987
No 373
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=93.10 E-value=0.076 Score=50.24 Aligned_cols=32 Identities=28% Similarity=0.441 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 55 HVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 55 dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
+|.|||+|..|+.+|..|++.|++|+++++..
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999999864
No 374
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=93.06 E-value=0.13 Score=46.09 Aligned_cols=34 Identities=32% Similarity=0.448 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|.|||.|..|..+|..|++.|++|+++++..
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999876
No 375
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=93.03 E-value=0.09 Score=48.11 Aligned_cols=36 Identities=31% Similarity=0.447 Sum_probs=32.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
-...+|+|+|||.+|+.+|..|...|. +|+++|+.-
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 346799999999999999999999998 999999975
No 376
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.01 E-value=0.078 Score=46.77 Aligned_cols=34 Identities=15% Similarity=0.135 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|+|.|+|.+|..++..|.++|++|+++.|..
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 3579999999999999999999999999999875
No 377
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.96 E-value=0.11 Score=47.62 Aligned_cols=34 Identities=18% Similarity=0.235 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|.|||.|..|..+|..|++.|++|+++++..
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999999999999999875
No 378
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=92.95 E-value=0.082 Score=46.69 Aligned_cols=34 Identities=29% Similarity=0.388 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
..+|+|||+|-.|..+|..|++.|. +++|+|.+.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 5789999999999999999999996 799999886
No 379
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=92.94 E-value=0.1 Score=47.09 Aligned_cols=34 Identities=21% Similarity=0.388 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|.|||.|..|..+|..|++.|++|+++++..
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4589999999999999999999999999999876
No 380
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=92.93 E-value=0.12 Score=44.95 Aligned_cols=34 Identities=26% Similarity=0.349 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...++|||+|-+|.++|+.|++.|.+|+|+.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999876
No 381
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=92.92 E-value=0.13 Score=46.61 Aligned_cols=34 Identities=24% Similarity=0.219 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|.|||.|..|.++|..|++.|++|+++++.+
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999999999999999875
No 382
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=92.90 E-value=0.089 Score=44.58 Aligned_cols=34 Identities=21% Similarity=0.357 Sum_probs=30.9
Q ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGG-GIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGa-Gi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...|+|.|| |.+|..++..|.++|++|+++.|..
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 357999995 9999999999999999999999975
No 383
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=92.85 E-value=0.12 Score=46.58 Aligned_cols=34 Identities=21% Similarity=0.439 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
..+|+|||+|-.|+.+|..|+..|. +++|+|.+.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 5789999999999999999999996 799999886
No 384
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=92.84 E-value=0.12 Score=46.32 Aligned_cols=33 Identities=30% Similarity=0.564 Sum_probs=30.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
.+|.|||+|.+|..+|..|+..|+ +|+++|...
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 479999999999999999999997 999999865
No 385
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=92.79 E-value=0.23 Score=42.83 Aligned_cols=33 Identities=15% Similarity=0.240 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC----cEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGA----AVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~----~V~lie~~~ 86 (429)
.+|.|||+|..|...|..|.+.|+ +|+++++.+
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 479999999999999999999998 999999976
No 386
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=92.78 E-value=0.08 Score=46.92 Aligned_cols=32 Identities=28% Similarity=0.323 Sum_probs=30.5
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 55 HVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 55 dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
+|.|||.|..|..+|..|++.|++|+++++.+
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 69999999999999999999999999999876
No 387
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=92.77 E-value=0.098 Score=46.71 Aligned_cols=33 Identities=27% Similarity=0.326 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.+|.|||+|..|..+|..|++.|++|+++++..
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 579999999999999999999999999999875
No 388
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=92.74 E-value=0.12 Score=46.37 Aligned_cols=32 Identities=31% Similarity=0.554 Sum_probs=29.5
Q ss_pred cEEEECCCHHHHHHHHHHHHC--CCcEEEEcCCC
Q 014198 55 HVAVCGGGIIGVCTAYFLAKK--GAAVTLIEKSS 86 (429)
Q Consensus 55 dvvIIGaGi~Gl~~A~~L~~~--G~~V~lie~~~ 86 (429)
+|+|||+|..|..+|..|++. |.+|+++|+..
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 689999999999999999985 78999999976
No 389
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=92.72 E-value=0.12 Score=43.40 Aligned_cols=32 Identities=28% Similarity=0.346 Sum_probs=29.9
Q ss_pred cEEEEC-CCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 55 HVAVCG-GGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 55 dvvIIG-aGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
+|+||| +|..|..+|..|++.|++|+++++..
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 589999 99999999999999999999999875
No 390
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=92.71 E-value=0.18 Score=44.90 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
...++|||+|.+|..+|..|++.|. +|+++.|..
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 4579999999999999999999997 899999875
No 391
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=92.70 E-value=0.09 Score=47.67 Aligned_cols=30 Identities=23% Similarity=0.396 Sum_probs=28.9
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEcC
Q 014198 55 HVAVCGGGIIGVCTAYFLAKKGAAVTLIEK 84 (429)
Q Consensus 55 dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~ 84 (429)
+|.|||+|..|...|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 589999999999999999999999999998
No 392
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=92.69 E-value=0.13 Score=43.15 Aligned_cols=32 Identities=22% Similarity=0.323 Sum_probs=29.8
Q ss_pred cEEEECC-CHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 55 HVAVCGG-GIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 55 dvvIIGa-Gi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
+|+|.|| |.+|..++..|.++|++|+++.|..
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 5899995 9999999999999999999999976
No 393
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=92.68 E-value=0.072 Score=45.13 Aligned_cols=34 Identities=18% Similarity=0.231 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEE-EcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTL-IEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~l-ie~~~ 86 (429)
..+|.|||+|..|..+|..|++.|++|++ +++..
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 35899999999999999999999999999 78765
No 394
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=92.66 E-value=0.11 Score=44.93 Aligned_cols=34 Identities=26% Similarity=0.453 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
..+|+|||+|-.|..+|..|++.|. +++|+|.+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4689999999999999999999997 789999886
No 395
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=92.64 E-value=0.1 Score=46.49 Aligned_cols=34 Identities=24% Similarity=0.263 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|.|||+|..|...|..|++.|++|+++++..
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3579999999999999999999999999999865
No 396
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=92.61 E-value=0.11 Score=47.46 Aligned_cols=35 Identities=26% Similarity=0.377 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
...+|+|+|+|-+|..+|..|...|. +|+++|+.-
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~G 226 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKG 226 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 46799999999999999999999998 799999973
No 397
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=92.59 E-value=0.13 Score=45.85 Aligned_cols=33 Identities=18% Similarity=0.474 Sum_probs=30.9
Q ss_pred CcEEEEC-CCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCG-GGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIG-aGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.+|.||| +|..|.++|..|++.|++|+++++..
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 4799999 99999999999999999999999875
No 398
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.53 E-value=0.13 Score=47.96 Aligned_cols=34 Identities=24% Similarity=0.332 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...|+|||+|.+|+.+|..|...|.+|+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999876
No 399
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.49 E-value=0.15 Score=45.85 Aligned_cols=34 Identities=21% Similarity=0.264 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA--AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~--~V~lie~~~ 86 (429)
..+|.|||.|..|.++|..|++.|+ +|+++++..
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 3579999999999999999999999 999999876
No 400
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=92.48 E-value=0.16 Score=45.68 Aligned_cols=33 Identities=27% Similarity=0.418 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.+|.|||+|..|...|..|++.|++|+++++..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999999875
No 401
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=92.44 E-value=0.1 Score=49.81 Aligned_cols=33 Identities=24% Similarity=0.394 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKK--GAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~--G~~V~lie~~~ 86 (429)
.+|.|||.|..|+.+|..|++. |++|+++++..
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5799999999999999999998 89999999864
No 402
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.43 E-value=0.15 Score=45.87 Aligned_cols=34 Identities=26% Similarity=0.542 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA--AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~--~V~lie~~~ 86 (429)
..+|+|||+|.+|..+|+.|+..|. +|+++|...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999987 899999875
No 403
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=92.42 E-value=0.045 Score=46.52 Aligned_cols=32 Identities=25% Similarity=0.219 Sum_probs=30.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKS 85 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~ 85 (429)
.+|.|||.|..|.++|..|+++|++|+.+++.
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred cEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 47999999999999999999999999999874
No 404
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=92.41 E-value=0.16 Score=45.75 Aligned_cols=34 Identities=26% Similarity=0.418 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
..+|.|||+|..|.++|+.|+..|+ +|+|+|...
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 4589999999999999999999998 999999876
No 405
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=92.41 E-value=0.15 Score=48.98 Aligned_cols=36 Identities=17% Similarity=0.242 Sum_probs=32.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.+..+|.|||.|..|..+|..|+++|++|+++++..
T Consensus 8 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 8 HMSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 345789999999999999999999999999999876
No 406
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=92.39 E-value=0.15 Score=43.02 Aligned_cols=32 Identities=22% Similarity=0.346 Sum_probs=29.8
Q ss_pred cEEEECC-CHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 55 HVAVCGG-GIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 55 dvvIIGa-Gi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
+|+|.|| |.+|..++..|.++|++|+++.|..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4899997 9999999999999999999999875
No 407
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.35 E-value=0.15 Score=46.83 Aligned_cols=33 Identities=27% Similarity=0.495 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..|+|+|+|.+|..++..|+..|.+|+++++..
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 689999999999999999999999999999876
No 408
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=92.32 E-value=0.14 Score=46.07 Aligned_cols=34 Identities=26% Similarity=0.529 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA--AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~--~V~lie~~~ 86 (429)
..+|.|||+|.+|.++|+.|+..|. +++++|...
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 4589999999999999999999987 899999865
No 409
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=92.28 E-value=0.13 Score=46.36 Aligned_cols=34 Identities=18% Similarity=0.056 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC-CcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKG-AAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G-~~V~lie~~~ 86 (429)
..+|.|||.|..|..+|..|++.| ++|+++++..
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 357999999999999999999999 9999999874
No 410
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.27 E-value=0.16 Score=47.08 Aligned_cols=34 Identities=24% Similarity=0.286 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...|+|||+|.+|+.+|..+...|.+|+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5689999999999999999999999999999876
No 411
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.25 E-value=0.16 Score=46.87 Aligned_cols=34 Identities=29% Similarity=0.491 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...|+|+|+|.+|..+|..|+..|.+|+++++..
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999876
No 412
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=92.23 E-value=0.14 Score=50.06 Aligned_cols=36 Identities=25% Similarity=0.367 Sum_probs=33.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 51 HSKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 51 ~~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
+..+|++|||+|++|+.+|..|++.|++|+|||++.
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~ 40 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGG 40 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 346899999999999999999999999999999987
No 413
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=92.18 E-value=0.13 Score=48.94 Aligned_cols=34 Identities=24% Similarity=0.350 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...|+|||+|-+|...+..|.+.|.+|+|+++..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 4679999999999999999999999999999864
No 414
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=92.17 E-value=0.16 Score=45.15 Aligned_cols=32 Identities=38% Similarity=0.666 Sum_probs=29.7
Q ss_pred cEEEECC-CHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 55 HVAVCGG-GIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 55 dvvIIGa-Gi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
+|+|.|| |.+|..++..|.++|++|+++.|.+
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 5999997 9999999999999999999998865
No 415
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=92.15 E-value=0.057 Score=46.24 Aligned_cols=33 Identities=21% Similarity=0.263 Sum_probs=30.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+++|+|+|..|..+|..|.+.|+ |+++|+++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 4579999999999999999999999 99999876
No 416
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=92.13 E-value=0.14 Score=45.74 Aligned_cols=34 Identities=26% Similarity=0.571 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA--AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~--~V~lie~~~ 86 (429)
..+|.|||+|..|..+|+.|+.+|+ .|+|+|...
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 4689999999999999999999998 999999875
No 417
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=92.11 E-value=0.16 Score=44.67 Aligned_cols=32 Identities=25% Similarity=0.399 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 55 HVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 55 dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
+|.|||+|..|..+|..|.+.|++|+++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999999875
No 418
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=92.11 E-value=0.35 Score=42.54 Aligned_cols=33 Identities=18% Similarity=0.287 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC---cEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGA---AVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~---~V~lie~~~ 86 (429)
.+|.|||+|..|.++|..|.+.|+ +|+++++..
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 579999999999999999999998 999999987
No 419
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=92.10 E-value=0.13 Score=46.40 Aligned_cols=32 Identities=31% Similarity=0.525 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014198 55 HVAVCGGGIIGVCTAYFLAKKGA--AVTLIEKSS 86 (429)
Q Consensus 55 dvvIIGaGi~Gl~~A~~L~~~G~--~V~lie~~~ 86 (429)
+|.|||+|..|..+|..|++.|+ +|+++|+..
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 58999999999999999999998 999999875
No 420
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=92.08 E-value=0.099 Score=46.95 Aligned_cols=31 Identities=32% Similarity=0.411 Sum_probs=29.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHC-----C-CcEEEEcC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKK-----G-AAVTLIEK 84 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~-----G-~~V~lie~ 84 (429)
.+|.|||+|..|...|..|++. | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 4799999999999999999999 9 99999988
No 421
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=92.08 E-value=0.11 Score=48.45 Aligned_cols=31 Identities=26% Similarity=0.506 Sum_probs=29.0
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 55 HVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 55 dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
+|.|||+|..|+.+|..|++ |++|+++++..
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 58999999999999999999 99999999864
No 422
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=92.03 E-value=0.26 Score=43.36 Aligned_cols=34 Identities=24% Similarity=0.411 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
...++|+|+|-+|.++++.|++.|. +|+|+.|..
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 5689999999999999999999998 699998875
No 423
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=92.02 E-value=0.29 Score=42.80 Aligned_cols=34 Identities=12% Similarity=0.184 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
...++|+|+|-+|.++|+.|++.|. +|+++.|..
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 5689999999999999999999995 899998876
No 424
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=91.96 E-value=0.24 Score=44.85 Aligned_cols=34 Identities=21% Similarity=0.308 Sum_probs=30.3
Q ss_pred CCcEEEECC-CHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014198 53 KKHVAVCGG-GIIGVCTAYFLAKKGA--AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGa-Gi~Gl~~A~~L~~~G~--~V~lie~~~ 86 (429)
..+|+|||+ |.+|..+|+.++..|. +|+++|...
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 468999997 9999999999999985 899999864
No 425
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=91.96 E-value=0.086 Score=48.57 Aligned_cols=32 Identities=28% Similarity=0.389 Sum_probs=30.5
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 55 HVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 55 dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
+|.|||+|..|...|..|++.|++|+++++..
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999999875
No 426
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=91.93 E-value=0.13 Score=45.14 Aligned_cols=34 Identities=18% Similarity=0.215 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...++|+|+|-+|..+|..|++.|.+|+++.|..
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4579999999999999999999999999999875
No 427
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=91.77 E-value=0.22 Score=44.79 Aligned_cols=34 Identities=26% Similarity=0.365 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
..+|.|||+|..|.++|+.|+..|. +|+++|...
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 3579999999999999999999988 999999876
No 428
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=91.74 E-value=0.19 Score=41.61 Aligned_cols=33 Identities=30% Similarity=0.462 Sum_probs=30.4
Q ss_pred CcEEEECC-CHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGG-GIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGa-Gi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..|+|+|| |.+|..++..|.++|++|+++.|..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 46999997 9999999999999999999999875
No 429
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=91.73 E-value=0.15 Score=51.38 Aligned_cols=33 Identities=36% Similarity=0.459 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.+|.|||+|..|..+|..|+++|++|+++|+.+
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 579999999999999999999999999999875
No 430
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=91.66 E-value=0.19 Score=45.68 Aligned_cols=35 Identities=20% Similarity=0.304 Sum_probs=30.2
Q ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 52 SKKHVAVCGG-GIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGa-Gi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
....|+|.|| |.+|..++..|.++|++|+++++..
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~ 53 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRP 53 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCC
Confidence 3568999997 9999999999999999999999876
No 431
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=91.64 E-value=0.21 Score=47.62 Aligned_cols=34 Identities=15% Similarity=0.285 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|.|||.|..|..+|..|++.|++|+++++..
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4589999999999999999999999999999986
No 432
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=91.61 E-value=0.2 Score=45.10 Aligned_cols=34 Identities=15% Similarity=0.162 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC----CcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKG----AAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G----~~V~lie~~~ 86 (429)
..+|.|||+|..|..+|..|++.| ++|+++++..
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 347999999999999999999999 7999999875
No 433
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=91.60 E-value=0.2 Score=46.21 Aligned_cols=34 Identities=29% Similarity=0.386 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...|+|||+|.+|..+|..++..|.+|+++++..
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999999999999999876
No 434
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=91.58 E-value=0.18 Score=48.23 Aligned_cols=34 Identities=24% Similarity=0.470 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
+.+|.|||.|..|..+|..|+++|++|+++++..
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 5689999999999999999999999999999875
No 435
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=91.58 E-value=0.16 Score=44.16 Aligned_cols=32 Identities=25% Similarity=0.373 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHHCC-CcEEEEcCCC
Q 014198 55 HVAVCGGGIIGVCTAYFLAKKG-AAVTLIEKSS 86 (429)
Q Consensus 55 dvvIIGaGi~Gl~~A~~L~~~G-~~V~lie~~~ 86 (429)
+|.|||+|..|...|..|++.| ++|+++++..
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 5899999999999999999999 9999999875
No 436
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=91.57 E-value=0.16 Score=47.66 Aligned_cols=34 Identities=29% Similarity=0.436 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+..|||.|..|+.+|..|++.|++|+++|+.+
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4578999999999999999999999999999986
No 437
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=91.53 E-value=0.16 Score=45.55 Aligned_cols=32 Identities=22% Similarity=0.377 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHHCC--CcEEEEcCCC
Q 014198 55 HVAVCGGGIIGVCTAYFLAKKG--AAVTLIEKSS 86 (429)
Q Consensus 55 dvvIIGaGi~Gl~~A~~L~~~G--~~V~lie~~~ 86 (429)
+|.|||+|-.|..+|..|++.| .+|+++|+..
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 6999999999999999999999 7899999875
No 438
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=91.42 E-value=0.15 Score=48.74 Aligned_cols=33 Identities=27% Similarity=0.453 Sum_probs=30.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKK--GAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~--G~~V~lie~~~ 86 (429)
.+|.|||.|..|+.+|..|++. |++|+++|+..
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5799999999999999999998 79999999864
No 439
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=91.40 E-value=0.16 Score=45.56 Aligned_cols=33 Identities=18% Similarity=0.166 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKS 85 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~ 85 (429)
..+|.|||.|..|..+|..|++.|+ +|+++++.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 3589999999999999999999999 99999986
No 440
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=91.38 E-value=0.19 Score=44.61 Aligned_cols=32 Identities=25% Similarity=0.230 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 55 HVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 55 dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
+|.|||+|..|...|..|++.|++|+++++..
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 58999999999999999999999999999876
No 441
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=91.37 E-value=0.3 Score=42.99 Aligned_cols=34 Identities=12% Similarity=0.129 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
...++|+|+|-+|..+|..|++.|. +|+|+.|..
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred CCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 5689999999999999999999996 899999876
No 442
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=91.34 E-value=0.24 Score=44.36 Aligned_cols=34 Identities=18% Similarity=0.436 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
...++|+|+|-+|.++|+.|++.|. +|+|+.|..
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRKD 188 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC
Confidence 5689999999999999999999998 899999873
No 443
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=91.33 E-value=0.15 Score=47.13 Aligned_cols=33 Identities=9% Similarity=0.205 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC-------CcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKG-------AAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G-------~~V~lie~~~ 86 (429)
.+|.|||+|..|..+|..|++.| ++|+++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~ 61 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDE 61 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECCh
Confidence 47999999999999999999999 9999999876
No 444
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=91.31 E-value=0.22 Score=43.80 Aligned_cols=32 Identities=22% Similarity=0.280 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014198 55 HVAVCGGGIIGVCTAYFLAKKGA--AVTLIEKSS 86 (429)
Q Consensus 55 dvvIIGaGi~Gl~~A~~L~~~G~--~V~lie~~~ 86 (429)
+|.|||+|..|.++|..|++.|+ +|+++++..
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 69999999999999999999998 899999875
No 445
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=91.28 E-value=0.23 Score=43.21 Aligned_cols=33 Identities=18% Similarity=0.150 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC----CcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKG----AAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G----~~V~lie~~~ 86 (429)
.+|.|||+|..|...|..|++.| ++|+++++..
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSK 41 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCc
Confidence 47999999999999999999999 7999999876
No 446
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=91.25 E-value=0.18 Score=44.78 Aligned_cols=33 Identities=24% Similarity=0.346 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.+|.|||+|..|...|..|++.|++|+++++..
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999999875
No 447
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=91.25 E-value=0.19 Score=44.89 Aligned_cols=35 Identities=29% Similarity=0.327 Sum_probs=31.4
Q ss_pred CCCcEEEECCC-HHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 52 SKKHVAVCGGG-IIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaG-i~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...+++|||+| ++|..+|..|...|.+|+++++..
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~ 211 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNN 211 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSE
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCch
Confidence 45799999999 679999999999999999998874
No 448
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=91.23 E-value=0.22 Score=44.78 Aligned_cols=34 Identities=21% Similarity=0.327 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA--AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~--~V~lie~~~ 86 (429)
..+|.|||+|.+|.++|+.|+..|. +|+++|...
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 4689999999999999999999997 899999865
No 449
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=91.22 E-value=0.19 Score=45.94 Aligned_cols=34 Identities=29% Similarity=0.472 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
..+|+|||+|-.|..+|..|++.|. +++|+|.+.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 5689999999999999999999996 799999876
No 450
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=91.21 E-value=0.19 Score=44.13 Aligned_cols=34 Identities=18% Similarity=0.116 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
...++|||+|-+|.++|..|++.|. +|+++.|..
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 4689999999999999999999998 899998875
No 451
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=91.20 E-value=0.19 Score=44.59 Aligned_cols=32 Identities=16% Similarity=0.348 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014198 55 HVAVCGGGIIGVCTAYFLAKKGA--AVTLIEKSS 86 (429)
Q Consensus 55 dvvIIGaGi~Gl~~A~~L~~~G~--~V~lie~~~ 86 (429)
+|.|||+|..|.++|+.|+..|. +|+++|...
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 68999999999999999999998 899999876
No 452
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=91.17 E-value=0.21 Score=44.08 Aligned_cols=33 Identities=24% Similarity=0.340 Sum_probs=30.9
Q ss_pred CcEEEECC-CHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGG-GIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGa-Gi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.+|.|||+ |..|..+|..|++.|++|+++++..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 47999999 9999999999999999999999875
No 453
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=91.13 E-value=0.33 Score=45.04 Aligned_cols=35 Identities=20% Similarity=0.438 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
....|+|||+|..|..+|..+.+.|++|++++...
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 34689999999999999999999999999998765
No 454
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=91.13 E-value=0.23 Score=47.49 Aligned_cols=33 Identities=15% Similarity=0.278 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.+|.|||+|..|..+|..|++.|++|+++++..
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999875
No 455
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=91.12 E-value=0.24 Score=46.83 Aligned_cols=34 Identities=32% Similarity=0.320 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...|+|+|+|.+|..+|..|+..|.+|+++|+.+
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4678999999999999999999999999999875
No 456
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=91.11 E-value=0.24 Score=44.54 Aligned_cols=34 Identities=26% Similarity=0.554 Sum_probs=30.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA--AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~--~V~lie~~~ 86 (429)
..+|+|||+|.+|.++|+.|+..|. +|+++|...
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 4689999999999999999998875 799999875
No 457
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=91.10 E-value=0.2 Score=45.64 Aligned_cols=34 Identities=21% Similarity=0.252 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
..+|+|||+|-.|..+|..|++.|. +++|+|.+.
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~ 70 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQ 70 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 5789999999999999999999997 799999876
No 458
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=91.08 E-value=0.25 Score=44.21 Aligned_cols=34 Identities=32% Similarity=0.535 Sum_probs=31.1
Q ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGG-GIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGa-Gi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...|+|.|| |.+|..++..|.++|++|+++.+..
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 41 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLR 41 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCC
Confidence 457999998 9999999999999999999999865
No 459
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=91.07 E-value=0.27 Score=44.68 Aligned_cols=33 Identities=36% Similarity=0.375 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..|.|||+|..|.+.|..|++.|++|++.++..
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 479999999999999999999999999998875
No 460
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=91.04 E-value=0.29 Score=42.44 Aligned_cols=33 Identities=12% Similarity=0.111 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.+|.|||+|..|...|..|.+.|++|.++++..
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 479999999999999999999999999999875
No 461
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=91.02 E-value=0.23 Score=48.22 Aligned_cols=34 Identities=21% Similarity=0.439 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
..+|+|||+|-.|+.+|..|++.|. +++|+|.+.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 5789999999999999999999996 799999886
No 462
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=90.94 E-value=0.34 Score=40.69 Aligned_cols=33 Identities=18% Similarity=0.206 Sum_probs=29.4
Q ss_pred CcEEEEC-CCHHHHHHHHHHH-HCCCcEEEEcCCC
Q 014198 54 KHVAVCG-GGIIGVCTAYFLA-KKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIG-aGi~Gl~~A~~L~-~~G~~V~lie~~~ 86 (429)
..|+|.| +|.+|..+|..|+ +.|++|+++.|..
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 3499999 5999999999999 8999999999875
No 463
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=90.90 E-value=0.43 Score=41.51 Aligned_cols=32 Identities=25% Similarity=0.349 Sum_probs=30.3
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 55 HVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 55 dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
+++|||+|-+|..+|..|.+.|.+|+++++..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 89999999999999999999999999999875
No 464
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=90.89 E-value=0.41 Score=44.16 Aligned_cols=35 Identities=26% Similarity=0.381 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
....|+|||+|..|..++..+.+.|++|++++..+
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~ 45 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSE 45 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 35689999999999999999999999999999765
No 465
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=90.89 E-value=0.24 Score=44.50 Aligned_cols=35 Identities=20% Similarity=0.466 Sum_probs=31.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGA--AVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~--~V~lie~~~ 86 (429)
...+|+|||+|.+|.++|+.|+..|. ++.|+|...
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 34689999999999999999999887 899999865
No 466
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=90.87 E-value=0.19 Score=50.69 Aligned_cols=34 Identities=35% Similarity=0.500 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|.|||+|..|..+|..|++.|++|+++|+..
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 3479999999999999999999999999999875
No 467
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=90.85 E-value=0.25 Score=43.45 Aligned_cols=34 Identities=15% Similarity=0.224 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
...++|+|+|-+|.++++.|.+.|. +|+|+.|..
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 5689999999999999999999998 899999875
No 468
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=90.80 E-value=0.31 Score=42.09 Aligned_cols=32 Identities=22% Similarity=0.366 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 55 HVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 55 dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
.++|||+|-+|.++++.|.+.|. +|++++|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 89999999999999999999998 899999875
No 469
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=90.78 E-value=0.22 Score=43.76 Aligned_cols=34 Identities=32% Similarity=0.449 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..+|+|||+|.+|.++|..|.+.|.+|+++++..
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4579999999999999999999999999999875
No 470
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=90.70 E-value=0.32 Score=43.80 Aligned_cols=35 Identities=20% Similarity=0.391 Sum_probs=31.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGA--AVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~--~V~lie~~~ 86 (429)
...+|.|||+|.+|.++|+.|+.+|. .++|+|...
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 35689999999999999999999997 899999865
No 471
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=90.69 E-value=0.14 Score=46.82 Aligned_cols=33 Identities=24% Similarity=0.314 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC-------CcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKG-------AAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G-------~~V~lie~~~ 86 (429)
.+|.|||+|..|...|..|++.| ++|+++++..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~ 48 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEE 48 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcCh
Confidence 47999999999999999999999 8999999876
No 472
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=90.68 E-value=0.21 Score=44.21 Aligned_cols=33 Identities=21% Similarity=0.410 Sum_probs=30.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...++|+|+|-+|.++|..|++.| +|++++|..
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 457999999999999999999999 999998865
No 473
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=90.65 E-value=0.15 Score=47.63 Aligned_cols=30 Identities=30% Similarity=0.470 Sum_probs=28.0
Q ss_pred CcEEEECCCHHHHHHHHHHHH-CCCcEEEEc
Q 014198 54 KHVAVCGGGIIGVCTAYFLAK-KGAAVTLIE 83 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~-~G~~V~lie 83 (429)
.+|.|||+|..|..+|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 379999999999999999998 599999999
No 474
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=90.62 E-value=0.24 Score=48.02 Aligned_cols=34 Identities=21% Similarity=0.439 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
..+|+|||+|-.|..+|..|++.|. +++|+|.+.
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~ 361 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 361 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 4689999999999999999999997 799999886
No 475
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=90.61 E-value=0.22 Score=44.00 Aligned_cols=31 Identities=26% Similarity=0.250 Sum_probs=29.3
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 55 HVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 55 dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
+|.|||+|..|...|..|++ |++|+++++..
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 69999999999999999999 99999999876
No 476
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=90.60 E-value=0.24 Score=44.34 Aligned_cols=32 Identities=25% Similarity=0.471 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014198 55 HVAVCGGGIIGVCTAYFLAKKGA--AVTLIEKSS 86 (429)
Q Consensus 55 dvvIIGaGi~Gl~~A~~L~~~G~--~V~lie~~~ 86 (429)
+|.|||+|.+|.++|+.|+..|. +++++|...
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 68999999999999999999887 899999876
No 477
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=90.58 E-value=0.3 Score=43.47 Aligned_cols=35 Identities=37% Similarity=0.358 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
....|.|||+|.+|..+|..|...|.+|+++++..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 35689999999999999999999999999999875
No 478
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=90.58 E-value=0.32 Score=46.08 Aligned_cols=52 Identities=21% Similarity=0.220 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHhhcCcEEEEce-EEEEEEccCCcEEEEEEeCCeEEEcCEEEEcCCCCc
Q 014198 190 LFTKTLLNKAVNDYGLEVVIGK-VERVGVGEGGRVESVMIEGGRVVESDAVVLALGPWS 247 (429)
Q Consensus 190 ~l~~~l~~~~~~~~Gv~v~~~~-v~~i~~~~~g~v~~v~~~~g~~i~ad~vV~a~G~~s 247 (429)
.+.+.|.+.+ |++|++++ |++|..+ ++..+.|.+ ++++++||.||+|++.+.
T Consensus 216 ~l~~~l~~~l----g~~i~~~~~V~~i~~~-~~~~v~v~~-~~~~~~ad~VI~a~p~~~ 268 (453)
T 2yg5_A 216 QVSIRMAEAL----GDDVFLNAPVRTVKWN-ESGATVLAD-GDIRVEASRVILAVPPNL 268 (453)
T ss_dssp HHHHHHHHHH----GGGEECSCCEEEEEEE-TTEEEEEET-TTEEEEEEEEEECSCGGG
T ss_pred HHHHHHHHhc----CCcEEcCCceEEEEEe-CCceEEEEE-CCeEEEcCEEEEcCCHHH
Confidence 4555555443 78999999 9999987 554123665 678899999999999764
No 479
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=90.57 E-value=0.34 Score=48.80 Aligned_cols=34 Identities=29% Similarity=0.372 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
-..|.|||+|..|..+|+.++..|++|+|+|..+
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 4689999999999999999999999999999875
No 480
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=90.51 E-value=0.44 Score=41.65 Aligned_cols=34 Identities=15% Similarity=0.249 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
...++|||+|-+|.++++.|.+.|. +|+|+.|..
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~ 153 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNV 153 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3579999999999999999999997 799998875
No 481
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=90.50 E-value=0.21 Score=45.18 Aligned_cols=33 Identities=30% Similarity=0.402 Sum_probs=29.3
Q ss_pred CCcEEEECC-CHHHHHHHHHHHHCCC-------cEEEEcCC
Q 014198 53 KKHVAVCGG-GIIGVCTAYFLAKKGA-------AVTLIEKS 85 (429)
Q Consensus 53 ~~dvvIIGa-Gi~Gl~~A~~L~~~G~-------~V~lie~~ 85 (429)
..+|+|+|| |.+|..++..|.++|+ +|+++|+.
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~ 44 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIP 44 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCG
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCC
Confidence 457999997 9999999999999986 89999875
No 482
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=90.49 E-value=0.31 Score=43.21 Aligned_cols=34 Identities=35% Similarity=0.383 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...|.|||.|.+|..+|..|...|.+|+++++..
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 5689999999999999999999999999999875
No 483
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=90.46 E-value=0.57 Score=40.68 Aligned_cols=34 Identities=32% Similarity=0.273 Sum_probs=29.7
Q ss_pred CCcEEEECC-C-HHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGG-G-IIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGa-G-i~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...++|.|| | -+|..+|..|+++|++|+++++..
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 446888898 7 499999999999999999999875
No 484
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=90.45 E-value=0.3 Score=44.31 Aligned_cols=34 Identities=26% Similarity=0.484 Sum_probs=30.6
Q ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGG-GIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGa-Gi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...|+|.|| |.+|..++..|.++|++|+++++..
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 61 (343)
T 2b69_A 27 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF 61 (343)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 457999997 9999999999999999999998754
No 485
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=90.44 E-value=0.27 Score=47.00 Aligned_cols=32 Identities=31% Similarity=0.506 Sum_probs=30.3
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 55 HVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 55 dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
+|.|||+|..|..+|..|++.|++|+++++..
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999875
No 486
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=90.40 E-value=0.29 Score=45.93 Aligned_cols=34 Identities=26% Similarity=0.303 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
..+|+|||+|-.|..+|..|++.|. +++|+|.+.
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~ 74 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDT 74 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCB
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 5789999999999999999999997 799999876
No 487
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=90.38 E-value=0.32 Score=44.41 Aligned_cols=34 Identities=21% Similarity=0.220 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...|+|+|.|-+|..+|..|.+.|.+|++.|+..
T Consensus 173 GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~ 206 (364)
T 1leh_A 173 GLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNK 206 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 5679999999999999999999999999988754
No 488
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=90.32 E-value=0.27 Score=48.13 Aligned_cols=33 Identities=30% Similarity=0.527 Sum_probs=31.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.+++|||+|-.|..+|..|.+.|++|++||+++
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~ 381 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQE 381 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCh
Confidence 689999999999999999999999999999987
No 489
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=90.23 E-value=0.34 Score=42.80 Aligned_cols=34 Identities=32% Similarity=0.420 Sum_probs=30.8
Q ss_pred CCcEEEEC-CCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCG-GGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIG-aGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...++|+| +|-+|.++|..|++.|.+|++++|..
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 45799999 99999999999999999999998865
No 490
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=90.12 E-value=0.35 Score=43.15 Aligned_cols=34 Identities=18% Similarity=0.264 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcCCC
Q 014198 53 KKHVAVCGGGIIGVCTAYFLAKKGA-AVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIGaGi~Gl~~A~~L~~~G~-~V~lie~~~ 86 (429)
...++|+|+|-+|.++|+.|++.|. +|+|+.|..
T Consensus 148 gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~ 182 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKD 182 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 5689999999999999999999998 799999874
No 491
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=90.11 E-value=0.31 Score=42.87 Aligned_cols=35 Identities=26% Similarity=0.343 Sum_probs=31.3
Q ss_pred CCCcEEEECCC-HHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 52 SKKHVAVCGGG-IIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaG-i~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...+++|||+| ++|.-+|..|.+.|.+|+++.+..
T Consensus 164 ~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t 199 (301)
T 1a4i_A 164 AGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT 199 (301)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc
Confidence 46799999999 689999999999999999997654
No 492
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=90.08 E-value=0.33 Score=43.19 Aligned_cols=33 Identities=24% Similarity=0.311 Sum_probs=30.3
Q ss_pred CcEEEECC-CHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGG-GIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGa-Gi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..|+|+|| |..|..++..|.++|++|+++.|..
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCc
Confidence 46999997 9999999999999999999999875
No 493
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=89.96 E-value=0.35 Score=41.51 Aligned_cols=32 Identities=28% Similarity=0.431 Sum_probs=29.1
Q ss_pred cEEEECC-CHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 55 HVAVCGG-GIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 55 dvvIIGa-Gi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.|+|.|| |.+|..+|..|+++|++|+++++..
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~ 35 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARAGHTVIGIDRGQ 35 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCh
Confidence 5888986 9999999999999999999999875
No 494
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=89.96 E-value=0.32 Score=44.86 Aligned_cols=33 Identities=30% Similarity=0.274 Sum_probs=30.3
Q ss_pred CcEEEECC-CHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGG-GIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGa-Gi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..|+|.|| |.+|..++..|.++|++|+++.+..
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~ 62 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRS 62 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCC
Confidence 57999997 9999999999999999999998875
No 495
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=89.95 E-value=0.4 Score=43.30 Aligned_cols=34 Identities=32% Similarity=0.400 Sum_probs=30.4
Q ss_pred CCcEEEEC-CCHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 53 KKHVAVCG-GGIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 53 ~~dvvIIG-aGi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
...|+|.| +|.+|..++..|+++|++|+++++..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~ 39 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLV 39 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCS
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCC
Confidence 45799998 59999999999999999999998865
No 496
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=89.87 E-value=0.3 Score=43.62 Aligned_cols=33 Identities=15% Similarity=0.166 Sum_probs=28.0
Q ss_pred CcEEEECC-CHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 54 KHVAVCGG-GIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGa-Gi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
..|+|.|| |.+|..++..|.++|++|+++.+..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRR 36 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---
T ss_pred CeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCC
Confidence 46999997 9999999999999999999998754
No 497
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=89.87 E-value=0.29 Score=42.64 Aligned_cols=33 Identities=21% Similarity=0.330 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCc-EEEEcCCC
Q 014198 54 KHVAVCGGGIIGVCTAYFLAKKGAA-VTLIEKSS 86 (429)
Q Consensus 54 ~dvvIIGaGi~Gl~~A~~L~~~G~~-V~lie~~~ 86 (429)
.+|.|||+|..|...|..|++.|++ |.++++..
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 4799999999999999999999999 89999875
No 498
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=89.85 E-value=0.3 Score=43.83 Aligned_cols=35 Identities=20% Similarity=0.511 Sum_probs=30.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--cEEEEcCCC
Q 014198 52 SKKHVAVCGGGIIGVCTAYFLAKKGA--AVTLIEKSS 86 (429)
Q Consensus 52 ~~~dvvIIGaGi~Gl~~A~~L~~~G~--~V~lie~~~ 86 (429)
+..+|+|||+|-+|.++|+.|+..+. .+.|+|...
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 40 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVK 40 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 44689999999999999999998876 899999864
No 499
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=89.80 E-value=0.27 Score=42.75 Aligned_cols=30 Identities=23% Similarity=0.202 Sum_probs=28.0
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEcC
Q 014198 55 HVAVCGGGIIGVCTAYFLAKKGAAVTLIEK 84 (429)
Q Consensus 55 dvvIIGaGi~Gl~~A~~L~~~G~~V~lie~ 84 (429)
+|.|||+|..|..+|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 589999999999999999999999999876
No 500
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=89.64 E-value=0.38 Score=42.87 Aligned_cols=32 Identities=31% Similarity=0.501 Sum_probs=29.4
Q ss_pred cEEEECC-CHHHHHHHHHHHHCCCcEEEEcCCC
Q 014198 55 HVAVCGG-GIIGVCTAYFLAKKGAAVTLIEKSS 86 (429)
Q Consensus 55 dvvIIGa-Gi~Gl~~A~~L~~~G~~V~lie~~~ 86 (429)
.|+|.|| |.+|..++..|.++|++|+++++..
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 34 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLS 34 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECCCS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCEEEEEeCCC
Confidence 5899997 9999999999999999999998865
Done!