Query 014199
Match_columns 429
No_of_seqs 245 out of 1047
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 07:15:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014199.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014199hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n1s_A HIT-like protein HINT; 99.7 4.5E-18 1.5E-22 145.9 7.4 99 213-311 2-107 (119)
2 3o0m_A HIT family protein; ssg 99.7 8E-18 2.7E-22 149.8 8.1 101 213-313 4-111 (149)
3 3imi_A HIT family protein; str 99.7 7.5E-18 2.6E-22 149.7 7.4 102 212-313 7-114 (147)
4 3lb5_A HIT-like protein involv 99.7 1.6E-17 5.6E-22 149.9 9.5 102 213-314 27-134 (161)
5 1y23_A HIT, histidine triad pr 99.7 4.8E-18 1.7E-22 150.1 5.9 102 213-314 4-111 (145)
6 3p0t_A Uncharacterized protein 99.7 3.2E-17 1.1E-21 143.9 9.1 100 214-313 5-105 (138)
7 4egu_A Histidine triad (HIT) p 99.7 2.6E-17 9E-22 140.8 8.2 99 214-312 4-109 (119)
8 3oj7_A Putative histidine tria 99.7 1.1E-17 3.6E-22 142.9 5.7 99 213-311 5-109 (117)
9 3l7x_A SMU.412C, putative HIT- 99.7 1.9E-17 6.4E-22 151.2 7.0 102 212-313 34-141 (173)
10 3r6f_A HIT family protein; str 99.7 5.5E-18 1.9E-22 148.5 2.3 100 213-314 5-104 (135)
11 2eo4_A 150AA long hypothetical 99.7 2.8E-17 9.5E-22 146.1 6.1 98 216-313 1-104 (149)
12 3o1c_A Histidine triad nucleot 99.7 2.6E-17 8.8E-22 142.5 5.6 99 213-311 14-118 (126)
13 2oik_A Histidine triad (HIT) p 99.7 2.6E-16 8.8E-21 140.7 12.0 98 213-314 9-107 (154)
14 3ano_A AP-4-A phosphorylase; d 99.7 4.4E-17 1.5E-21 153.8 6.9 102 213-314 68-177 (218)
15 3ksv_A Uncharacterized protein 99.7 7.2E-17 2.5E-21 143.8 7.0 102 213-314 10-117 (149)
16 1xqu_A HIT family hydrolase; p 99.6 7.5E-17 2.6E-21 143.5 5.1 99 213-311 34-139 (147)
17 1fit_A FragIle histidine prote 99.5 1.6E-14 5.5E-19 127.9 8.3 89 225-313 10-104 (147)
18 1ems_A Nitfhit, NIT-fragIle hi 99.4 1.2E-13 3.9E-18 142.7 8.6 99 213-313 296-400 (440)
19 3ohe_A Histidine triad (HIT) p 99.4 2.7E-13 9.2E-18 119.1 8.1 89 226-314 11-100 (137)
20 3i24_A HIT family hydrolase; s 99.4 8E-13 2.7E-17 117.7 10.3 89 226-314 11-100 (149)
21 1z84_A Galactose-1-phosphate u 99.3 6.7E-12 2.3E-16 126.4 8.6 98 214-314 214-321 (351)
22 1gup_A Galactose-1-phosphate u 99.2 4.1E-12 1.4E-16 127.8 5.3 97 214-310 194-301 (348)
23 3nrd_A Histidine triad (HIT) p 99.2 7E-11 2.4E-15 103.3 11.0 87 226-313 13-101 (135)
24 3i4s_A Histidine triad protein 99.1 5.4E-10 1.8E-14 99.4 11.0 88 226-314 16-105 (149)
25 3sp4_A Aprataxin-like protein; 98.7 2.1E-08 7.2E-13 93.1 6.3 84 230-313 23-127 (204)
26 1z84_A Galactose-1-phosphate u 97.8 0.00024 8.3E-09 71.2 13.4 111 215-325 62-212 (351)
27 1m9o_A Tristetraproline; Cys3H 96.9 0.0003 1E-08 54.8 2.1 58 139-196 13-76 (77)
28 2cqe_A KIAA1064 protein; CCCH 96.0 0.0044 1.5E-07 50.8 3.7 49 139-196 14-62 (98)
29 3d2q_A Muscleblind-like protei 96.0 0.0038 1.3E-07 47.8 2.9 54 139-195 7-65 (70)
30 3bl9_A Scavenger mRNA-decappin 95.0 0.077 2.6E-06 51.7 9.0 86 226-312 149-248 (301)
31 2d9n_A Cleavage and polyadenyl 95.0 0.014 4.7E-07 45.6 3.0 53 139-196 11-63 (77)
32 3d2n_A Muscleblind-like protei 95.0 0.014 4.9E-07 46.3 3.1 55 139-196 10-67 (83)
33 1vlr_A MRNA decapping enzyme; 94.6 0.086 3E-06 52.2 8.2 86 226-312 196-295 (350)
34 2e5s_A Otthump00000018578; ZF- 93.9 0.013 4.5E-07 47.9 0.7 55 139-196 21-80 (98)
35 2rhk_C Cleavage and polyadenyl 93.9 0.023 7.8E-07 43.8 1.9 53 139-196 17-69 (72)
36 2rpp_A Muscleblind-like protei 93.8 0.027 9.3E-07 45.2 2.3 54 139-195 18-74 (89)
37 1gup_A Galactose-1-phosphate u 90.0 2 6.9E-05 42.4 11.3 63 250-313 106-174 (348)
38 2pof_A CDP-diacylglycerol pyro 60.2 12 0.00042 34.8 5.6 88 247-338 48-145 (227)
39 1m9o_A Tristetraproline; Cys3H 56.7 2.3 7.8E-05 32.3 0.0 24 139-162 51-74 (77)
40 2fc6_A Nuclear, target of EGR1 53.9 3.3 0.00011 29.3 0.4 26 137-162 19-44 (50)
41 2d9m_A Zinc finger CCCH-type d 51.9 3.9 0.00013 31.1 0.6 29 139-168 21-49 (69)
42 2cqe_A KIAA1064 protein; CCCH 47.4 5.8 0.0002 31.9 1.0 25 139-163 37-61 (98)
43 2rpp_A Muscleblind-like protei 36.5 18 0.0006 28.7 2.2 25 171-196 18-43 (89)
44 3d2q_A Muscleblind-like protei 33.1 21 0.0007 26.7 2.0 25 171-196 7-32 (70)
45 3d2n_A Muscleblind-like protei 32.6 23 0.00078 27.6 2.3 26 170-196 9-35 (83)
46 2fc6_A Nuclear, target of EGR1 28.1 23 0.00077 25.1 1.3 27 169-195 19-45 (50)
47 2e5s_A Otthump00000018578; ZF- 25.6 15 0.00053 29.5 0.1 33 139-173 57-89 (98)
48 2d9n_A Cleavage and polyadenyl 20.4 53 0.0018 24.8 2.3 25 171-196 11-35 (77)
No 1
>3n1s_A HIT-like protein HINT; histidine triad nucleotide binding protein, GMP, hydro; HET: 5GP; 1.45A {Escherichia coli} SCOP: d.13.1.0 PDB: 3n1t_A*
Probab=99.72 E-value=4.5e-18 Score=145.93 Aligned_cols=99 Identities=18% Similarity=0.176 Sum_probs=77.8
Q ss_pred CCCCcccCCCCCCCcceEEEECCeEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHH-----hc
Q 014199 213 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK-----NQ 287 (429)
Q Consensus 213 ~~~C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~-----~~ 287 (429)
.++|+||.+..+.....||++++.+++++|..|.++||+||||++|+.++.+|+++++.++..+...+.++.+ ..
T Consensus 2 ~~~CiFC~I~~ge~~~~iv~ede~~~af~d~~P~~pgH~LViPk~Hv~~l~dL~~~e~~~l~~l~~~~~~v~~~~~~~~~ 81 (119)
T 3n1s_A 2 AEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAED 81 (119)
T ss_dssp CCCCHHHHHHTTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHTTCTTT
T ss_pred CCCChhhhhhcCCCcCCEEEECCCEEEEECCCCCCCCeEEEEehhHhCCHhHcCHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 3579999975443345689999999999999999999999999999999999999976666665554444443 35
Q ss_pred CCceEEEe--ecCCCCceeEEEEEec
Q 014199 288 GKEAVFFE--WLSKRGTHANLQAVPI 311 (429)
Q Consensus 288 g~~~v~~E--~~~~~~~H~HihvVPv 311 (429)
|++++++. .+++.+.|+|+||||+
T Consensus 82 g~ni~~n~g~~agq~V~HlH~Hiipr 107 (119)
T 3n1s_A 82 GYRLIMNTNRHGGQEVYHIHMHLLGG 107 (119)
T ss_dssp CEEEEEEEHHHHTCCSSSCCEEEEES
T ss_pred CeEEEEeCCCCcCCCcCEEEEEEeCC
Confidence 66777665 2445578999999996
No 2
>3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str}
Probab=99.72 E-value=8e-18 Score=149.81 Aligned_cols=101 Identities=21% Similarity=0.311 Sum_probs=82.0
Q ss_pred CCCCcccCCCCCCCcceEEEECCeEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----
Q 014199 213 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQ----- 287 (429)
Q Consensus 213 ~~~C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~~----- 287 (429)
+++|+||.+..+.....||+++++++++++..|..+||+||||++|+.++.+|+++++.+|....+.+.+.++..
T Consensus 4 m~~CiFC~i~~~e~~~~iv~e~~~~~af~d~~p~~pgh~lViPk~H~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~ 83 (149)
T 3o0m_A 4 SMSCVFCAIVSGDAPAIRIYEDENFLGILDIRPFTRGHTLVIPKTHTVDLTDTPPETVAGMAAVGQRIARAARESGLHAD 83 (149)
T ss_dssp TTTCHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCCSTTTSCHHHHHHHHHHHHHHHHHHHHSTTCCS
T ss_pred CCCCccCccccCCCCCCEEEECCCEEEEEcCCCCCCCeEEEEechhhCCHhHCCHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 568999987654444678999999999999999999999999999999999999999999999988888877654
Q ss_pred CCceEEEe-e-cCCCCceeEEEEEecCc
Q 014199 288 GKEAVFFE-W-LSKRGTHANLQAVPIPT 313 (429)
Q Consensus 288 g~~~v~~E-~-~~~~~~H~HihvVPvp~ 313 (429)
|++++++. . +++.+.|+|+||||+-.
T Consensus 84 ~~ni~~n~g~~aGq~v~HlHiHiiPR~~ 111 (149)
T 3o0m_A 84 GNNIAINDGKAAFQTVFHIHLHVVPRRN 111 (149)
T ss_dssp EEEEECCCSGGGTCCSSSCCEEEEEECT
T ss_pred ceEEEEecCCCCCCccceEEEEEECCcc
Confidence 33343333 1 23346899999999744
No 3
>3imi_A HIT family protein; structural genomics, infectious diseases for structural genomics of infectious diseases, unknown FUN csgid; 2.01A {Bacillus anthracis str} SCOP: d.13.1.1
Probab=99.71 E-value=7.5e-18 Score=149.65 Aligned_cols=102 Identities=19% Similarity=0.173 Sum_probs=82.9
Q ss_pred CCCCCcccCCCCCCCcceEEEECCeEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHH----hc
Q 014199 212 RSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK----NQ 287 (429)
Q Consensus 212 ~~~~C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~----~~ 287 (429)
.+++|+||.+..+.....||+++++++++++..|..+||+||||++|+.++.+|+++++.+|....+.+.+.+. ..
T Consensus 7 ~m~~CifC~i~~~e~~~~iV~e~~~~~a~~d~~p~~pgh~lViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~~ 86 (147)
T 3imi_A 7 TADNCIFCKIIDGQILCSKVYEDEHVLAFLDISQVTKGHTLVIPKVHKQDIFALTPEIASHIFSVVPKIANAIKAEFNPV 86 (147)
T ss_dssp CGGGCHHHHHHTTSSCCCEEEECSSEEEEECTTCSSTTCEEEEESSCCCSGGGCCHHHHHHHHHTHHHHHHHHHHHHCCS
T ss_pred ccCCCcCcccccCCCcCCEEEECCCEEEEEcCCCCCCcEEEEEEeeccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 45689999976543345689999999999999999999999999999999999999999999877766665544 45
Q ss_pred CCceEEEe--ecCCCCceeEEEEEecCc
Q 014199 288 GKEAVFFE--WLSKRGTHANLQAVPIPT 313 (429)
Q Consensus 288 g~~~v~~E--~~~~~~~H~HihvVPvp~ 313 (429)
|++++++. .+++.+.|+|+||||+-.
T Consensus 87 ~~ni~~n~g~~aGq~v~HlHiHiiPR~~ 114 (147)
T 3imi_A 87 GFNLLNNNGEKAGQTVFHFHLHLIPRYG 114 (147)
T ss_dssp EEEEEEEESGGGTCCSSSCCEEEEEECS
T ss_pred CEEEEEeCCcccCCCcCEEEEEEeCCcc
Confidence 66776665 234447899999999854
No 4
>3lb5_A HIT-like protein involved in cell-cycle regulatio; niaid, seattle structural genomics center for infectious DIS ssgcid, histidine triad; 1.90A {Bartonella henselae}
Probab=99.71 E-value=1.6e-17 Score=149.88 Aligned_cols=102 Identities=14% Similarity=0.104 Sum_probs=83.7
Q ss_pred CCCCcccCCCCCCCcceEEEECCeEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHH----HhcC
Q 014199 213 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYY----KNQG 288 (429)
Q Consensus 213 ~~~C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~----~~~g 288 (429)
.++|+||.+..+.....||++++++++++|..|..+||+||||++|+.++.+|+++++.+|....+.+.+.+ ...|
T Consensus 27 ~~~CiFC~i~~~e~p~~iV~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~ee~~~l~~~~~~v~~~l~~~~~~~g 106 (161)
T 3lb5_A 27 DNNNIFAKLIRNEIPSVRVYEDDDVIAFMDIMPQAPGHTLVIPKKGSRNLLDADTETLFPVIKAVQKIAKAVKKAFQADG 106 (161)
T ss_dssp CTTSHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSTTTSCHHHHHHHHHHHHHHHHHHHHHHTCSE
T ss_pred CCCCcccccccCCCCccEEEECCCEEEEECCCcCCCcEEEEEEeeccchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 568999998655444678999999999999999999999999999999999999999999988776666554 4567
Q ss_pred CceEEEe--ecCCCCceeEEEEEecCcc
Q 014199 289 KEAVFFE--WLSKRGTHANLQAVPIPTS 314 (429)
Q Consensus 289 ~~~v~~E--~~~~~~~H~HihvVPvp~~ 314 (429)
++++++. .+++.+.|+|+||||+-..
T Consensus 107 ~ni~~n~g~~aGq~V~HlHiHiiPR~~~ 134 (161)
T 3lb5_A 107 ITVMQFNEAASQQTVYHLHFHIIPRMEG 134 (161)
T ss_dssp EEEEEEESGGGTCCSCSCCEEEEEECTT
T ss_pred EEEEEecCcccCCCCCEEEEEEEcccCC
Confidence 7777665 2334468999999998543
No 5
>1y23_A HIT, histidine triad protein; HIT protein, PKCI-1, cell-cycle regulation, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Bacillus subtilis} SCOP: d.13.1.1
Probab=99.71 E-value=4.8e-18 Score=150.06 Aligned_cols=102 Identities=18% Similarity=0.198 Sum_probs=80.6
Q ss_pred CCCCcccCCCCCCCcceEEEECCeEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHH----HHhcC
Q 014199 213 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMY----YKNQG 288 (429)
Q Consensus 213 ~~~C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~----~~~~g 288 (429)
+++|+||.+..+.....||++++.++++++++|..+||+||||++|+.++.+|+++++.+|....+.+.+. +...|
T Consensus 4 ~~~C~fC~i~~~e~~~~iv~e~~~~~a~~~~~p~~pgh~LViPk~h~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~~~~ 83 (145)
T 1y23_A 4 AENCIFCKIIAGDIPSAKVYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQYFHAVPKIARAIRDEFEPIG 83 (145)
T ss_dssp -CCCHHHHHHHTSSCCCEEEECSSEEEEECTTCSSTTCEEEEESSCCSSGGGCCHHHHHTTTTHHHHHHHHHHHHHCCSE
T ss_pred CCCCcCCccccCCCCCCEEEECCCEEEEECCCCCCCCeEEEEEhhhhhhHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 45799999753333347889999999999999999999999999999999999999998888666555554 44466
Q ss_pred CceEEEe--ecCCCCceeEEEEEecCcc
Q 014199 289 KEAVFFE--WLSKRGTHANLQAVPIPTS 314 (429)
Q Consensus 289 ~~~v~~E--~~~~~~~H~HihvVPvp~~ 314 (429)
++++++. .+++...|+|+||||+...
T Consensus 84 ~ni~~n~g~~~g~~v~HlH~HiiPr~~~ 111 (145)
T 1y23_A 84 LNTLNNNGEKAGQSVFHYHMHIIPRYGK 111 (145)
T ss_dssp EEEEEEESGGGTCCSSSCCEEEEEECST
T ss_pred EEEEEcCCcCCCCCcCEEEEEEEccccC
Confidence 7777766 2334468999999997543
No 6
>3p0t_A Uncharacterized protein; ssgcid, HIT-like protein, mycobacerium paratuberculosis, STR genomics; 1.90A {Mycobacterium avium subsp}
Probab=99.70 E-value=3.2e-17 Score=143.86 Aligned_cols=100 Identities=13% Similarity=0.054 Sum_probs=81.1
Q ss_pred CCCcccCCCCCCCcceEEEECCeEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCceE
Q 014199 214 KECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEAV 292 (429)
Q Consensus 214 ~~C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~-~g~~~v 292 (429)
.+|+||.+..+.....||+++++++++++..|.++||+||||++|+.++.+|+++++.+|....+.+.+.+.. .+..-+
T Consensus 5 ~~CiFC~i~~~e~p~~iV~e~~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ 84 (138)
T 3p0t_A 5 MASIFTKIINRELPGRFVYEDDDVVAFLTIEPMTQGHTLVVPREEIDNWQDVDSAAFNRVMGVSQLIGKAVCKAFRTERS 84 (138)
T ss_dssp HHHHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCCCGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEE
T ss_pred CCChhhHHhcCCCCcCEEEeCCCEEEEecCCCCCCcEEEEEEhHHhCchhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 4699998754433345889999999999999999999999999999999999999999999888877776653 454444
Q ss_pred EEeecCCCCceeEEEEEecCc
Q 014199 293 FFEWLSKRGTHANLQAVPIPT 313 (429)
Q Consensus 293 ~~E~~~~~~~H~HihvVPvp~ 313 (429)
.+..+++.+.|+|+||||+..
T Consensus 85 n~~~~gq~v~HlH~HiiPr~~ 105 (138)
T 3p0t_A 85 GLIIAGLEVPHLHVHVFPTRS 105 (138)
T ss_dssp EEEECCSSCSSCCEEEEEESC
T ss_pred cEEECCcccCEEEEEEecccc
Confidence 444345557899999999854
No 7
>4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile}
Probab=99.70 E-value=2.6e-17 Score=140.76 Aligned_cols=99 Identities=13% Similarity=0.152 Sum_probs=76.2
Q ss_pred CCCcccCCCCCCCcceEEEECCeEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHH---HHHHH--HHhcC
Q 014199 214 KECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQN---SLMMY--YKNQG 288 (429)
Q Consensus 214 ~~C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~---~L~~~--~~~~g 288 (429)
.+|+||.+..+.....||++++++++++|..|.++||+||||++|+.++.+|+++++.++..+.+ .+.+. +.+.|
T Consensus 4 ~~C~FC~i~~~e~~~~iv~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~~~~~~~~~~~~~~~ 83 (119)
T 4egu_A 4 MDCIFCKIANGEIPSTKVYEDDRVLAFNDLNPVAPYHILVVPKKHYDSLIDIPDKEMDIVSHIHVVINKIAKEKGFDQTG 83 (119)
T ss_dssp TTCHHHHHHTTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSCCSSGGGSCGGGTHHHHHHHHHHHHHHHHHTHHHHC
T ss_pred CCccCeecccCCCCCCEEEECCCEEEEECCCCCCCceEEEEechhhCCHhHCCHhHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 57999997544334678999999999999999999999999999999999999886555554444 44333 23457
Q ss_pred CceEEEe-e-cCCCCceeEEEEEecC
Q 014199 289 KEAVFFE-W-LSKRGTHANLQAVPIP 312 (429)
Q Consensus 289 ~~~v~~E-~-~~~~~~H~HihvVPvp 312 (429)
++++++. . +++...|+|+||||..
T Consensus 84 ~ni~~n~g~~agq~v~HlH~Hiip~~ 109 (119)
T 4egu_A 84 FRVINNCGSDGGQEVKHLHYHILAGK 109 (119)
T ss_dssp EEEEEEETTTTTCCSCSCCEEEEESS
T ss_pred EEEEEeCCCCCCCCcCEEEEEEeCCc
Confidence 7777666 2 3344689999999973
No 8
>3oj7_A Putative histidine triad family protein; hydrolase, structural genomics, seattle structural genomics for infectious disease, ssgcid; 1.40A {Entamoeba histolytica} SCOP: d.13.1.0 PDB: 3omf_A* 3oxk_A*
Probab=99.69 E-value=1.1e-17 Score=142.88 Aligned_cols=99 Identities=19% Similarity=0.256 Sum_probs=75.2
Q ss_pred CCC-CcccCCCCCCCcceEEEECCeEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---cC
Q 014199 213 SKE-CWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN---QG 288 (429)
Q Consensus 213 ~~~-C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~---~g 288 (429)
+++ |+||.+..+.....||++++++++++|..|..+||+||||++|+.++.+|+++++.++..+.+.+.++.+. .|
T Consensus 5 m~~~CiFC~i~~~e~~~~iv~e~~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~l~~~~~~~~~~~~~~g 84 (117)
T 3oj7_A 5 MADSCIFCKIAQKQIPSTIVYEDDEIFAFKDINPIAPIHILVIPKQHIASLNEITEENEAFIGKVLYKVSLIGKKECPEG 84 (117)
T ss_dssp ----CHHHHHHTTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSCCCSGGGCCTTTHHHHHHHHHHHHHHHHHHCTTC
T ss_pred cCCCCcccccccCCCCCCEEEECCcEEEEECCCCCCCceEEEEechHhCCHHHCCHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 445 99999855444467899999999999999999999999999999999999988777777666655555443 25
Q ss_pred CceEEEe-e-cCCCCceeEEEEEec
Q 014199 289 KEAVFFE-W-LSKRGTHANLQAVPI 311 (429)
Q Consensus 289 ~~~v~~E-~-~~~~~~H~HihvVPv 311 (429)
++++++. . +++...|+|+|+||+
T Consensus 85 ~ni~~n~g~~agq~v~H~H~Hiipr 109 (117)
T 3oj7_A 85 YRVVNNIGEDAGQTVKHIHFHILGG 109 (117)
T ss_dssp EEEECCCSTTTTCCSSSCCEEEEES
T ss_pred eEEEEcCCCCCCeeeeEEEEEEeCC
Confidence 5555444 2 233468999999996
No 9
>3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans}
Probab=99.69 E-value=1.9e-17 Score=151.21 Aligned_cols=102 Identities=22% Similarity=0.202 Sum_probs=82.4
Q ss_pred CCCCCcccCCCCCCCcceEEEECCeEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHH----HHhc
Q 014199 212 RSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMY----YKNQ 287 (429)
Q Consensus 212 ~~~~C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~----~~~~ 287 (429)
.+++|+||.+..+.....||++++.+++++|..|..+||+||||++|+.++.+|+++++.+|....+.+.+. |...
T Consensus 34 ~m~~CiFC~Ii~~e~p~~iV~e~e~~~afld~~P~~pgH~LVIPkrHv~~l~dL~~ee~~~L~~~~~~v~~~l~~~~~~~ 113 (173)
T 3l7x_A 34 SMNDCLFCKIVAGDIPSSKVYEDEDVLAFLDISQATKGHTLVIPKEHVRNALEMTQTQAANLFARIPKIARALQKATKAD 113 (173)
T ss_dssp CCTTCHHHHHHHTSSCCCEEEECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHHHHHHTHHHHHHHHHHHHTCS
T ss_pred CCCCCcccccccCCCCceEEEECCCEEEEEcCCCCCCcEEEEEeccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 367899999864433456899999999999999999999999999999999999999999998776655554 4456
Q ss_pred CCceEEEe--ecCCCCceeEEEEEecCc
Q 014199 288 GKEAVFFE--WLSKRGTHANLQAVPIPT 313 (429)
Q Consensus 288 g~~~v~~E--~~~~~~~H~HihvVPvp~ 313 (429)
|++++++. .+++.+.|+|+||||+-.
T Consensus 114 g~ni~~n~g~~aGq~V~HlHiHiIPR~~ 141 (173)
T 3l7x_A 114 GLNIINNNEETAGQTVFHAHVHLVPRFA 141 (173)
T ss_dssp EEEEEECCSGGGTCCSCSCCEEEEEECC
T ss_pred CEEEEEecCcccCCCcCEEEEEEEeccc
Confidence 66776665 233446899999999854
No 10
>3r6f_A HIT family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, protozoan parasite; 1.85A {Encephalitozoon cuniculi}
Probab=99.68 E-value=5.5e-18 Score=148.45 Aligned_cols=100 Identities=18% Similarity=0.260 Sum_probs=83.6
Q ss_pred CCCCcccCCCCCCCcceEEEECCeEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCceE
Q 014199 213 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAV 292 (429)
Q Consensus 213 ~~~C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~~g~~~v 292 (429)
+++|+||.+.. ....||++++++++++|..|..+||+||||++|+.++.+|+++++.+|....+.|.+.+...+++++
T Consensus 5 ~~~C~fC~i~~--~~~~iv~e~~~~~af~d~~p~~pgh~lViPk~H~~~l~dL~~~~~~~l~~~~~~v~~~~~~~~~ni~ 82 (135)
T 3r6f_A 5 MEGCIFCTLYR--KGANIIYETDRLFALIDRYPLSKGHFLVIPKAHHPYLHNYKPEELSGVLDTIRHLVQKFGFERYNIL 82 (135)
T ss_dssp -CCCHHHHHHH--HCCSCCEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCGGGGTTHHHHHHHHHHHHTCCSEEEE
T ss_pred CCCCcCccccc--CCceEEEECCCEEEEECCCCCCCCeEEEEEhhHhCCHhHCCHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 56899999754 3345789999999999999999999999999999999999999999999999999888877776665
Q ss_pred EEeecCCCCceeEEEEEecCcc
Q 014199 293 FFEWLSKRGTHANLQAVPIPTS 314 (429)
Q Consensus 293 ~~E~~~~~~~H~HihvVPvp~~ 314 (429)
++...++...|+|+|+||+...
T Consensus 83 ~n~g~gq~v~HlH~HiiPR~~~ 104 (135)
T 3r6f_A 83 QNNGNHQEVFHVHFHVIPFVSA 104 (135)
T ss_dssp CCSSSSCSSSSCCEEEEECCBT
T ss_pred EEcCCCCCccEEEEEEeccccC
Confidence 5442233468999999998654
No 11
>2eo4_A 150AA long hypothetical histidine triad nucleotid protein; HIT family, structural genomics, NPPSFA; 1.80A {Sulfolobus tokodaii}
Probab=99.68 E-value=2.8e-17 Score=146.09 Aligned_cols=98 Identities=21% Similarity=0.244 Sum_probs=79.0
Q ss_pred CcccCCCCCCCcceEEEECCeEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHH----hcCCce
Q 014199 216 CWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK----NQGKEA 291 (429)
Q Consensus 216 C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~----~~g~~~ 291 (429)
|+||.+..+.....||+++++++++++..|..+||+||||++|+.++.+|+++++.+|....+.+.+.+. ..|+++
T Consensus 1 CiFC~i~~~e~~~~iv~e~~~~~a~~d~~p~~pgh~lViPk~H~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ni 80 (149)
T 2eo4_A 1 CTFCSIINRELEGYFVYEDEKFAAILDKYPVSLGHTLVIPKKHFENYLEADEDTLAELAKVVKLVSLGIKDAVKADGLRL 80 (149)
T ss_dssp CHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred CcCcccccCCCCccEEEECCCEEEEECCCCCCCCeEEEEechhhCCHhHCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEE
Confidence 9999875443345788999999999999999999999999999999999999999999988777766655 345555
Q ss_pred EEEe--ecCCCCceeEEEEEecCc
Q 014199 292 VFFE--WLSKRGTHANLQAVPIPT 313 (429)
Q Consensus 292 v~~E--~~~~~~~H~HihvVPvp~ 313 (429)
+++. .+++...|+|+||||+..
T Consensus 81 ~~n~g~~~gq~v~HlHiHviPr~~ 104 (149)
T 2eo4_A 81 LTNIGRSAGQVIFHLHVHIIPTWE 104 (149)
T ss_dssp ECCCSGGGTCCSCSCCEEEEEECS
T ss_pred EEecCcCCCCCcCEEEEEEECCcC
Confidence 5554 223346899999999753
No 12
>3o1c_A Histidine triad nucleotide-binding protein 1; hydrolase, HINT protein, HIT protein, adenosine 5'- monophosphoramidase; HET: ADN; 1.08A {Oryctolagus cuniculus} SCOP: d.13.1.1 PDB: 3llj_A* 1rzy_A* 3qgz_A* 3o1z_A 3o1x_A* 4eqe_A* 4eqg_A* 4eqh_A* 3tw2_A* 1kpb_A 1kpf_A* 1kpa_A 1kpc_A 1av5_A* 1kpe_A* 4rhn_A* 3rhn_A* 5rhn_A* 6rhn_A
Probab=99.67 E-value=2.6e-17 Score=142.49 Aligned_cols=99 Identities=17% Similarity=0.098 Sum_probs=76.1
Q ss_pred CCCCcccCCCCCCCcceEEEECCeEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh----cC
Q 014199 213 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN----QG 288 (429)
Q Consensus 213 ~~~C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~----~g 288 (429)
.++|.||.+..+.....||++++++++++|..|.++||+||||++|+.++.+|+++.+.++..+...+.++.+. .|
T Consensus 14 ~~~CiFC~i~~~e~~~~iv~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~l~~~~~~~~~~~~~~~g 93 (126)
T 3o1c_A 14 GGDTIFGKIIRKEIPAKIIFEDDQALAFHDISPQAPTHFLVIPKKHISQISAAEDADESLLGHLMIVGKKCAADLGLKKG 93 (126)
T ss_dssp TCSSHHHHHHHTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSCCCCGGGCCGGGHHHHHHHHHHHHHHHHHTTCTTC
T ss_pred CCCCCcchhhcCCCcCCEEEECCCEEEEECCCCCCCceEEEEechHhchHhhCchhHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 56899998754333356889999999999999999999999999999999999988766666655444444433 45
Q ss_pred CceEEEe--ecCCCCceeEEEEEec
Q 014199 289 KEAVFFE--WLSKRGTHANLQAVPI 311 (429)
Q Consensus 289 ~~~v~~E--~~~~~~~H~HihvVPv 311 (429)
++++++. .+++.+.|+|+||||.
T Consensus 94 ~ni~~n~g~~agq~v~HlH~Hiipr 118 (126)
T 3o1c_A 94 YRMVVNEGSDGGQSVYHVHLHVLGG 118 (126)
T ss_dssp EEEECCCHHHHTCCSSSCCEEEEES
T ss_pred eEEEEecCCccCCccCEeEEEEeCC
Confidence 6665554 2344578999999996
No 13
>2oik_A Histidine triad (HIT) protein; HIT-like fold, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.65A {Methylobacillus flagellatus} SCOP: d.13.1.1
Probab=99.67 E-value=2.6e-16 Score=140.66 Aligned_cols=98 Identities=13% Similarity=0.113 Sum_probs=77.9
Q ss_pred CCCCcccCCCCCCCcceEEEECCeEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCce
Q 014199 213 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEA 291 (429)
Q Consensus 213 ~~~C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~-~g~~~ 291 (429)
+++|+||.+. ...||+++++++++++++|..+||+||||++|+.++.+|+++++.+|....+.+.+.++. .+...
T Consensus 9 ~~~C~FC~~~----~~~iv~e~~~~~a~~d~~p~~pgh~LViPk~H~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~~~g 84 (154)
T 2oik_A 9 HKNCELCTTA----GGEILWQDALCRVVHVENQDYPGFCRVILNRHVKEMSDLRPAERDHLMLVVFAVEEAVREVMRPDK 84 (154)
T ss_dssp CTTCHHHHSC----CSEEEEECSSEEEEECCCTTCTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHCCSE
T ss_pred CCCCccCCCC----CCeEEEECCcEEEEEcCCCCCCeEEEEEecCCcCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 4579999854 357899999999999999999999999999999999999999999998777777666553 23222
Q ss_pred EEEeecCCCCceeEEEEEecCcc
Q 014199 292 VFFEWLSKRGTHANLQAVPIPTS 314 (429)
Q Consensus 292 v~~E~~~~~~~H~HihvVPvp~~ 314 (429)
+.+...++...|+|+||||+...
T Consensus 85 ~ni~~~gq~v~HlHiHiiPr~~~ 107 (154)
T 2oik_A 85 INLASLGNMTPHVHWHVIPRFKR 107 (154)
T ss_dssp EEEEECCSSSCSCEEEEEEECTT
T ss_pred EEhHHhCCCCCEEEEEEeCCCCC
Confidence 22222445578999999998654
No 14
>3ano_A AP-4-A phosphorylase; diadenosine polyphosphate, HIT transferase; HET: PG4; 1.89A {Mycobacterium tuberculosis}
Probab=99.67 E-value=4.4e-17 Score=153.84 Aligned_cols=102 Identities=22% Similarity=0.182 Sum_probs=82.7
Q ss_pred CCCCcccCCCCC-CCcceEEEECCeEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh----c
Q 014199 213 SKECWFCLSSPS-VESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN----Q 287 (429)
Q Consensus 213 ~~~C~FC~~~~~-~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~----~ 287 (429)
.++|+||.+... .....||++++.++++++++|+++||+||||++|+.++.+|+++++.+|..+.+.+.++++. .
T Consensus 68 ~~~CiFC~i~~~e~~~~~iV~edd~~~afld~~P~~pGH~LVIPkrHv~~l~dL~~ee~~~L~~l~~~v~~~l~~~~~~~ 147 (218)
T 3ano_A 68 SPAQPFTEIPQLSDEEGLVVARGKLVYAVLNLYPYNPGHLMVVPYRRVSELEDLTDLESAELMAFTQKAIRVIKNVSRPH 147 (218)
T ss_dssp --CCHHHHGGGSCHHHHTEEEECSSEEEEECSSCSSTTCEEEEESSCCCCGGGSCHHHHHHHHHHHHHHHHHHHHHCCCS
T ss_pred CCCCcCcccccCCCCCceEEEECCcEEEEEccCCCCCcEEEEEechhhCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 457999998654 24667899999999999999999999999999999999999999999999887777766654 4
Q ss_pred CCceEEEe-ec-CCCC-ceeEEEEEecCcc
Q 014199 288 GKEAVFFE-WL-SKRG-THANLQAVPIPTS 314 (429)
Q Consensus 288 g~~~v~~E-~~-~~~~-~H~HihvVPvp~~ 314 (429)
|++++++. .. ++.+ .|+|+||||+...
T Consensus 148 g~ni~~n~G~~aGq~V~~HlHiHIIPR~~g 177 (218)
T 3ano_A 148 GFNVGLNLGTSAGGSLAEHLHVHVVPRWGG 177 (218)
T ss_dssp EEEEEEEESGGGTCTTTTSCCEEEEEECTT
T ss_pred CEEEEEecCcccCCcccCEEEEEEEcccCC
Confidence 56666665 23 3345 7999999998654
No 15
>3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0
Probab=99.66 E-value=7.2e-17 Score=143.84 Aligned_cols=102 Identities=17% Similarity=0.193 Sum_probs=83.0
Q ss_pred CCCCcccCCCCCCCcceEEEECCeEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh----cC
Q 014199 213 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN----QG 288 (429)
Q Consensus 213 ~~~C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~----~g 288 (429)
..+|+||.+..+.....||++++.+++++|..|..+||+||||++|+.++.+|+++++.+|....+.+.+.+.. .|
T Consensus 10 ~~~~iFc~Ii~geip~~iV~ed~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~~g 89 (149)
T 3ksv_A 10 AANCIFCKIIKGDIPCAKVAETSKALAFMDINPLSRGHMLVIPKEHASCLHELGMEDAADVGVLLAKASRAVAGPDGSMQ 89 (149)
T ss_dssp CTTCHHHHHHHTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHCTTSCCE
T ss_pred cccCHHHHHHcCCCCccEEEECCCEEEEECCCCCCCCEEEEEeChhhhhhhhCCHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 35899999864433456889999999999999999999999999999999999999999999998888887764 34
Q ss_pred CceEEEe--ecCCCCceeEEEEEecCcc
Q 014199 289 KEAVFFE--WLSKRGTHANLQAVPIPTS 314 (429)
Q Consensus 289 ~~~v~~E--~~~~~~~H~HihvVPvp~~ 314 (429)
++++++. .+++.+.|+|+||||+-..
T Consensus 90 ~ni~~n~g~~aGq~v~HlHiHiiPR~~~ 117 (149)
T 3ksv_A 90 YNVLQNNGSLAHQEVPHVHFHIIPKTDE 117 (149)
T ss_dssp EEEEECCSTTTTCCSSSCCEEEEEECCT
T ss_pred EEEEEecCcccCCCCCEEEEEEEecccC
Confidence 5555444 2233468999999998554
No 16
>1xqu_A HIT family hydrolase; protein STRU initiative, PSI, southeast collaboratory for structural GEN secsg; 2.30A {Clostridium thermocellum} SCOP: d.13.1.1
Probab=99.64 E-value=7.5e-17 Score=143.47 Aligned_cols=99 Identities=17% Similarity=0.138 Sum_probs=77.4
Q ss_pred CCCCcccCCCCCCCcceEEEECCeEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----
Q 014199 213 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQ----- 287 (429)
Q Consensus 213 ~~~C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~~----- 287 (429)
+++|+||.+..+.....||++++++++++|++|..+||+||||++|+.++.+|+++++.++..+.+.++++.+..
T Consensus 34 m~~CiFC~ii~~e~~~~iV~e~e~~~af~d~~P~~pgH~LViPkrHv~~l~dL~~~e~~~l~~l~~~~~~v~~~~~~~~~ 113 (147)
T 1xqu_A 34 LENCVFCKIIKRELPSTIYYEDERVIAIKDINPAAPVHVLIIPKEHIANVKEINESNAQILIDIHKAANKVAEDLGIAEK 113 (147)
T ss_dssp CTTCHHHHHHTTSSCBCEEEECSSEEEEECSSCSSSEEEEEEESSCCSSGGGCCTTTTTHHHHHHHHHHHHHHHTTCTTT
T ss_pred cCCCcccccccCCCCcEEEEECCcEEEEEecCCCCccEEEEEeCcccCChhHCCHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 568999997544334578999999999999999999999999999999999999888777777766555555543
Q ss_pred CCceEEEe-e-cCCCCceeEEEEEec
Q 014199 288 GKEAVFFE-W-LSKRGTHANLQAVPI 311 (429)
Q Consensus 288 g~~~v~~E-~-~~~~~~H~HihvVPv 311 (429)
|++++++. . +++...|+|+||||.
T Consensus 114 gyni~~n~g~~aGq~v~HlHlHiiP~ 139 (147)
T 1xqu_A 114 GYRLITNCGVAAGQTVFHLHYHLLGG 139 (147)
T ss_dssp CEEEECCCSTTTTCCSCSCCEEEEES
T ss_pred CEEEEEecCcccCCCccEEEEEEeCC
Confidence 44544443 1 223468999999996
No 17
>1fit_A FragIle histidine protein; FHIT, fragIle histidine triad protein, putative human tumor suppressor, advanced photon source, APS; HET: FRU; 1.85A {Homo sapiens} SCOP: d.13.1.1 PDB: 1fhi_A* 2fit_A* 3fit_A* 4fit_A 5fit_A* 6fit_A* 2fhi_A*
Probab=99.52 E-value=1.6e-14 Score=127.91 Aligned_cols=89 Identities=15% Similarity=0.220 Sum_probs=73.2
Q ss_pred CCcceEEEECCeEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHH----hcCCceEEEe--ecC
Q 014199 225 VESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK----NQGKEAVFFE--WLS 298 (429)
Q Consensus 225 ~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~----~~g~~~v~~E--~~~ 298 (429)
++...||+++++++++++..|..+||+||||++|+.++.+|+++++.+|....+.+.+.+. ..|++++++. .++
T Consensus 10 ip~~~iv~e~~~~~a~~d~~p~~pgh~LViPk~h~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ni~~n~g~~ag 89 (147)
T 1fit_A 10 IKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFSMQDGPEAG 89 (147)
T ss_dssp ECGGGEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECCSGGGT
T ss_pred cCCcEEEEECCCEEEEECCCCCCCcEEEEEEccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEecCCccC
Confidence 4566789999999999999999999999999999999999999999999987777776665 3455655554 133
Q ss_pred CCCceeEEEEEecCc
Q 014199 299 KRGTHANLQAVPIPT 313 (429)
Q Consensus 299 ~~~~H~HihvVPvp~ 313 (429)
+.+.|+|+||||+..
T Consensus 90 q~v~HlH~HiiPr~~ 104 (147)
T 1fit_A 90 QTVKHVHVHVLPRKA 104 (147)
T ss_dssp CCSSSCCEEEEEECT
T ss_pred CCccEEEEEEECCcC
Confidence 446899999999754
No 18
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=99.44 E-value=1.2e-13 Score=142.74 Aligned_cols=99 Identities=13% Similarity=0.148 Sum_probs=80.2
Q ss_pred CCCCcccCCCCCCCcceEEEECCeEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh----cC
Q 014199 213 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN----QG 288 (429)
Q Consensus 213 ~~~C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~----~g 288 (429)
...|.||. ...+...||+++++++++++..|..+||+||||++|+.++.+|+++++.+|....+.+.+.+.. .|
T Consensus 296 ~~~c~fc~--~e~p~~~iv~e~~~~~a~~~~~p~~pgh~lviPk~h~~~~~~l~~~~~~~l~~~~~~v~~~l~~~~~~~~ 373 (440)
T 1ems_A 296 TGGLKFAR--FNIPADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADLFIVAKKVQAMLEKHHNVTS 373 (440)
T ss_dssp SSCCEETT--EECCGGGEEEECSSEEEEECSSCSSTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSE
T ss_pred cCceeeec--cccCCceEEEECCCEEEEEcCCcCCCCeEEEEEccccCChhHCCHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 56899998 3345667899999999999999999999999999999999999999999999888877776653 34
Q ss_pred CceEEEe--ecCCCCceeEEEEEecCc
Q 014199 289 KEAVFFE--WLSKRGTHANLQAVPIPT 313 (429)
Q Consensus 289 ~~~v~~E--~~~~~~~H~HihvVPvp~ 313 (429)
++++++. .+++.+.|+|+||||+-.
T Consensus 374 ~n~~~~~g~~~gq~v~HlH~Hiipr~~ 400 (440)
T 1ems_A 374 TTICVQDGKDAGQTVPHVHIHILPRRA 400 (440)
T ss_dssp EEEECCCSGGGTCCSSSCCEEEEEECS
T ss_pred eEEEEecCCCCCCCccEEEEEEeCCCC
Confidence 4554443 123346899999999743
No 19
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei}
Probab=99.42 E-value=2.7e-13 Score=119.06 Aligned_cols=89 Identities=11% Similarity=-0.035 Sum_probs=72.8
Q ss_pred CcceEEEECCeEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCceEEEeecCCCCcee
Q 014199 226 ESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEAVFFEWLSKRGTHA 304 (429)
Q Consensus 226 ~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~-~g~~~v~~E~~~~~~~H~ 304 (429)
...++|+.++.|++.|++.|..+||+||+|++|+.++.+|+++++.++......+.+.+++ .+.+-+.+..+++.++|+
T Consensus 11 ~d~~~v~~~~~~~v~l~~~p~~pGh~lV~~k~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~N~~~aGq~V~Hl 90 (137)
T 3ohe_A 11 ADTHKLGESRLCDVLLMNDNTWPWVILVPRVSGIREIYELPNEQQQRLLFESSALSEGMMELFGGDKMNVAALGNMVPQL 90 (137)
T ss_dssp HHEEEEEECSSEEEEEESCTTSCEEEEEESCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECCSSCCSC
T ss_pred cccEEEEECCcEEEEEcCCCCCCEEEEEecccccCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeeccCcCCEE
Confidence 4568999999999999999999999999999999999999999988888777777766553 455444444355567899
Q ss_pred EEEEEecCcc
Q 014199 305 NLQAVPIPTS 314 (429)
Q Consensus 305 HihvVPvp~~ 314 (429)
|+||||+-..
T Consensus 91 H~HviPR~~~ 100 (137)
T 3ohe_A 91 HLHHIVRYQG 100 (137)
T ss_dssp CEEEEEECTT
T ss_pred EEEEeCCCCC
Confidence 9999997543
No 20
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114}
Probab=99.40 E-value=8e-13 Score=117.69 Aligned_cols=89 Identities=9% Similarity=0.049 Sum_probs=72.9
Q ss_pred CcceEEEECCeEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCceEEEeecCCCCcee
Q 014199 226 ESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEAVFFEWLSKRGTHA 304 (429)
Q Consensus 226 ~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~-~g~~~v~~E~~~~~~~H~ 304 (429)
+..++|+.++.|++.|++.|..+||+||+|++|+.++.+|+++++.++......+.+.++. .+.+.+.+..+++.++|+
T Consensus 11 ~d~~~v~~~~~~~v~L~~~p~~pGh~LV~pk~Hv~~l~dL~~e~~~~l~~~~~~va~al~~~~~~~~~Ni~~aGq~V~Hl 90 (149)
T 3i24_A 11 QDCIVLGNLPLCKVLLIKEDIGPWLILVPRIEELKEIHHMTDEQQIQFIKESSAVAQLLEDNFSPDKINIGALGNLVPQL 90 (149)
T ss_dssp HHEEEEEECSSEEEEEECBSSTTEEEEEESCTTCSSGGGSCHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEECCSSCCSC
T ss_pred cCCEEEEECCCEEEEEcCCCCCCEEEEEeCccccCChhHCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEhhhhCCCCEE
Confidence 4567999999999999999999999999999999999999999988888777766666553 455544444455567899
Q ss_pred EEEEEecCcc
Q 014199 305 NLQAVPIPTS 314 (429)
Q Consensus 305 HihvVPvp~~ 314 (429)
|+||||+-..
T Consensus 91 H~HvIPR~~~ 100 (149)
T 3i24_A 91 HIHHIARFTT 100 (149)
T ss_dssp CEEEEEECTT
T ss_pred EEEEeCCccC
Confidence 9999998553
No 21
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=99.26 E-value=6.7e-12 Score=126.44 Aligned_cols=98 Identities=16% Similarity=0.235 Sum_probs=77.7
Q ss_pred CCCcccCCCCCCCcceEEEECCeEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHH----hcCC
Q 014199 214 KECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK----NQGK 289 (429)
Q Consensus 214 ~~C~FC~~~~~~~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~----~~g~ 289 (429)
++|+||.+... .+||++++++++++|..|..|||+||||++|+.++.+|+++++.+|..+.+.+.+.+. ..++
T Consensus 214 ~~ciFc~ii~~---E~iV~E~e~~~af~~~~p~~P~h~lViPk~Hv~~l~dl~~~e~~~La~~l~~v~~~l~~~~~~~~y 290 (351)
T 1z84_A 214 GKCCLCEAKSK---HFVIDESSHFVSVAPFAATYPFEIWIIPKDHSSHFHHLDDVKAVDLGGLLKLMLQKIAKQLNDPPY 290 (351)
T ss_dssp SSCTTTTHHHH---SEEEEECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHTTSCCE
T ss_pred CCCHHHHHHhc---CeEEecCCcEEEEeccCCCCCeEEEEEeccccCChHHCCHHHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 57999997532 1289999999999999999999999999999999999999999999988776654443 3456
Q ss_pred ceEEEe-ecCC-----CCceeEEEEEecCcc
Q 014199 290 EAVFFE-WLSK-----RGTHANLQAVPIPTS 314 (429)
Q Consensus 290 ~~v~~E-~~~~-----~~~H~HihvVPvp~~ 314 (429)
+++++. ..++ ...|+|+|+||+-+.
T Consensus 291 n~~~n~gp~~g~~~~q~v~HlHiHiiPR~~~ 321 (351)
T 1z84_A 291 NYMIHTSPLKVTESQLPYTHWFLQIVPQLSG 321 (351)
T ss_dssp EEEEECCCTTCCGGGGGGCCCEEEEEECCCC
T ss_pred EEEEeCCCccCCCCCCccceEEEEEEccCCC
Confidence 666655 2222 356999999996543
No 22
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=99.24 E-value=4.1e-12 Score=127.84 Aligned_cols=97 Identities=12% Similarity=0.062 Sum_probs=75.7
Q ss_pred CCCcccCCCCC-CC-cceEEEECCeEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHH----hc
Q 014199 214 KECWFCLSSPS-VE-SHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK----NQ 287 (429)
Q Consensus 214 ~~C~FC~~~~~-~~-~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~----~~ 287 (429)
++|.||.+... .+ ...||++++++++++|..|..+||+||||++|+.++.+|+++++.+|....+.+.+.+. ..
T Consensus 194 ~~Cifc~ii~~E~~~~~~iV~E~e~~~af~~~~p~~pgh~lViPK~Hv~~l~dL~~~e~~~La~~l~~v~~~l~~~~~~~ 273 (348)
T 1gup_A 194 KSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCS 273 (348)
T ss_dssp SSCHHHHHHHHHHHHCTTEEEECSSEEEECCTTCCSTTCEEEEESSCCSSGGGCCHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred CCCchhHHHhhccccCceEEEeCCcEEEEEccCCCCceEEEEEeCcccCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 68999987532 21 23688999999999999999999999999999999999999999999977665555544 32
Q ss_pred -CCceEEEe-ecC---CCCceeEEEEEe
Q 014199 288 -GKEAVFFE-WLS---KRGTHANLQAVP 310 (429)
Q Consensus 288 -g~~~v~~E-~~~---~~~~H~HihvVP 310 (429)
+++++++- ..+ +...|+|+||||
T Consensus 274 ~~Yn~g~~~~p~~g~~q~v~HlHiHiiP 301 (348)
T 1gup_A 274 FPYSMGWHGAPFNGEENQHWQLHAHFYP 301 (348)
T ss_dssp CCEEEEEECCCSSSSCCTTCCCEEEEEC
T ss_pred CCeEEEEEeCCCCCCCCcccEEEEEEec
Confidence 55556554 122 235799999999
No 23
>3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti}
Probab=99.20 E-value=7e-11 Score=103.31 Aligned_cols=87 Identities=10% Similarity=0.058 Sum_probs=68.0
Q ss_pred CcceEEEECCeEEEEecCCCCCCCeEEEEec-cccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCceEEEeecCCCCce
Q 014199 226 ESHLIVSVGEYYYCALPKGPLVEDHVLVIPV-EHVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEAVFFEWLSKRGTH 303 (429)
Q Consensus 226 ~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~-~H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~-~g~~~v~~E~~~~~~~H 303 (429)
+..++|+.++.|++.|.+.|..|| .||||+ +|+.++.+|+++++.++......+.+.++. .+.+-+.+..+++.++|
T Consensus 13 ~~~~~v~~~~~~~v~l~~~~~~p~-~lvVpkr~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~N~~~aGq~V~H 91 (135)
T 3nrd_A 13 RDGIPIGTLGLCQMRLMNDRRWPW-LILVPQRADIKEVFELTPLDQAMLTFETNLVAAGLKKATGAEKINIGALGNIVRQ 91 (135)
T ss_dssp HHEEEEEECSSEEEEEESCTTSCE-EEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECCSSCCS
T ss_pred cCCEEEEECCcEEEEEcCCCCCCE-EEEEcCccccCChHHCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccCCCCE
Confidence 345789999999999999999995 577787 899999999999988888777766666543 34444444435555789
Q ss_pred eEEEEEecCc
Q 014199 304 ANLQAVPIPT 313 (429)
Q Consensus 304 ~HihvVPvp~ 313 (429)
+|+||||+-.
T Consensus 92 lH~HviPR~~ 101 (135)
T 3nrd_A 92 LHVHVIARRE 101 (135)
T ss_dssp CCEEEEEECT
T ss_pred EEEEEecCCC
Confidence 9999999754
No 24
>3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum}
Probab=99.08 E-value=5.4e-10 Score=99.37 Aligned_cols=88 Identities=10% Similarity=0.017 Sum_probs=69.1
Q ss_pred CcceEEEECCeEEEEecCCCCCCCeEEEEecc-ccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCceEEEeecCCCCce
Q 014199 226 ESHLIVSVGEYYYCALPKGPLVEDHVLVIPVE-HVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEAVFFEWLSKRGTH 303 (429)
Q Consensus 226 ~~hlIvs~g~~~yl~l~kgPl~~GH~LIIP~~-H~~s~~~l~~e~~~Ei~~~~~~L~~~~~~-~g~~~v~~E~~~~~~~H 303 (429)
...+++.....++|.+...+ ..+|+||||++ |+.++.+|+++++.+|....+.+.+.++. .+.+-+.+..+++.++|
T Consensus 16 ~d~~~~~e~p~~~v~l~~~~-~~~H~LVIPk~~H~~~l~dL~~e~~~~l~~~~~~va~~l~~~~~~~g~N~~~aGq~V~H 94 (149)
T 3i4s_A 16 EDTIDIGDLPLSKVLVIKDA-NYPWLLLVPRRPDAVEIIDLDEVQQAQLMTEISRVSRALKEITKCDKLNIAALGNLVPQ 94 (149)
T ss_dssp HHEEEEEECSSEEEEEESCT-TSCEEEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECCSSCCS
T ss_pred hCCEEEEEcCceEEEECCCC-CCCEEEEEecccccCChhHCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeecCCcCCE
Confidence 45678899999999998544 56799999999 99999999999999998888777776653 34433333435556789
Q ss_pred eEEEEEecCcc
Q 014199 304 ANLQAVPIPTS 314 (429)
Q Consensus 304 ~HihvVPvp~~ 314 (429)
+|+||||+..+
T Consensus 95 lH~HvIPR~~~ 105 (149)
T 3i4s_A 95 LHVHIIARRTG 105 (149)
T ss_dssp CCEEEEEECTT
T ss_pred EEEEEECCcCC
Confidence 99999998553
No 25
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=98.67 E-value=2.1e-08 Score=93.12 Aligned_cols=84 Identities=6% Similarity=0.056 Sum_probs=60.6
Q ss_pred EEEECCeEEEEecCCCCCCCeEEEEeccccCCCCCCC------HHHHHHHHHHHH-H-HHHHHHh-----------cCC-
Q 014199 230 IVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTS------PECEKELGRFQN-S-LMMYYKN-----------QGK- 289 (429)
Q Consensus 230 Ivs~g~~~yl~l~kgPl~~GH~LIIP~~H~~s~~~l~------~e~~~Ei~~~~~-~-L~~~~~~-----------~g~- 289 (429)
||++++.++++++++|.++||+||||++|+.++..+. .++..+|..+.. . |.+++.. .|+
T Consensus 23 ~v~edd~~~af~D~~P~a~~H~LVIPk~h~~~~~~p~~al~d~~~Ll~~m~~la~~~~l~~~~~~~~~~~~~~~~~~~~~ 102 (204)
T 3sp4_A 23 VIYYDDDVVLVRDMFPKSKMHLLLMTRDPHLTHVHPLEIMMKHRSLVEKLVSYVQGDLSGLIFDEARNCLSQQLTNEALC 102 (204)
T ss_dssp EEEECSSEEEEECSSCSSSSEEEEEECCTTTTTSCHHHHHHHCHHHHHHHHHHHHTTTHHHHHHHHHHHSCTTCCHHHHH
T ss_pred EEEEcCCEEEEeCCCCCCCccEEEEeccccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCcCCee
Confidence 8999999999999999999999999999999988653 356777777766 4 5555531 111
Q ss_pred ceEEEe-ecCCCCceeEEEEEecCc
Q 014199 290 EAVFFE-WLSKRGTHANLQAVPIPT 313 (429)
Q Consensus 290 ~~v~~E-~~~~~~~H~HihvVPvp~ 313 (429)
..+-+. -+.....|+|+|||-.+.
T Consensus 103 ~~i~~GfHa~PSm~HLHLHVIS~Df 127 (204)
T 3sp4_A 103 NYIKVGFHAGPSMNNLHLHIMTLDH 127 (204)
T ss_dssp TTEEEEEESSCSSSSCCEEEEESCC
T ss_pred eeEeccCCCCCcccceeEEEeccCC
Confidence 122222 133345799999998643
No 26
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=97.76 E-value=0.00024 Score=71.18 Aligned_cols=111 Identities=12% Similarity=0.107 Sum_probs=73.1
Q ss_pred CCcccCCCCCCCcceEEE-----ECCeEEEEecCCCCCC------------C-----------eEEEEeccccCCCCCCC
Q 014199 215 ECWFCLSSPSVESHLIVS-----VGEYYYCALPKGPLVE------------D-----------HVLVIPVEHVPNTISTS 266 (429)
Q Consensus 215 ~C~FC~~~~~~~~hlIvs-----~g~~~yl~l~kgPl~~------------G-----------H~LIIP~~H~~s~~~l~ 266 (429)
.|+||-.+......-|.. .+-.++++.+++|..+ | +++|.+-+|..++.+|+
T Consensus 62 ~CpfCpg~~~~t~~e~~~~~~~~~~~~~~v~~N~fP~l~~~~~~~~~~~~~~l~~~~~~~G~~~Vii~sp~H~~~l~~ls 141 (351)
T 1z84_A 62 SCPFCIGREQECAPELFRVPDHDPNWKLRVIENLYPALSRNLETQSTQPETGTSRTIVGFGFHDVVIESPVHSIQLSDID 141 (351)
T ss_dssp CCTTSTTCGGGSSCEEEEESTTCSSCSEEEEECSSCSSBGGGTTTC--------CEEECBCEEEEEECCSSSSCCGGGSC
T ss_pred CCcCCCCCcccCCcccccccccCCCceEEEEcCCCccccCCCCCcccccccchhhccccCcceEEEEeCCCCCCCcHHCC
Confidence 699999875432122222 3567899999999873 5 88999999999999999
Q ss_pred HHHHHHHHHHHH-HHHHHHHhcCC-ceEEEee---cCCC-CceeEEEEEecCcc------hHHHHHHHHHH
Q 014199 267 PECEKELGRFQN-SLMMYYKNQGK-EAVFFEW---LSKR-GTHANLQAVPIPTS------KAAAVQDIFNL 325 (429)
Q Consensus 267 ~e~~~Ei~~~~~-~L~~~~~~~g~-~~v~~E~---~~~~-~~H~HihvVPvp~~------~~~~~~~~F~~ 325 (429)
.+.+.++..+-. .+..+.+..+. -+.+||+ .++. ..|.|.|++-.|.- ....+..||.+
T Consensus 142 ~~e~~~vi~~~~~~~~~L~~~~~~~yv~iF~N~G~~aGaSl~HpH~QI~a~~~~p~~~~~e~~~~~~y~~~ 212 (351)
T 1z84_A 142 PVGIGDILIAYKKRINQIAQHDSINYIQVFKNQGASAGASMSHSHSQMMALPVVPPTVSSRLDGTKDYFEE 212 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTCCEEEEEEEESGGGTCCCSSCEEEEEEESSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCCEEEEEEEcCcccCCCCcCccceeEecCcCChHHHHHHHHHHHHHhh
Confidence 999888887644 44443333344 3556662 2222 46999999875532 12245556655
No 27
>1m9o_A Tristetraproline; Cys3His type zinc finger, metal binding protein; NMR {Mus musculus} SCOP: g.66.1.1 PDB: 1rgo_A
Probab=96.94 E-value=0.0003 Score=54.78 Aligned_cols=58 Identities=29% Similarity=0.733 Sum_probs=23.9
Q ss_pred CcceeeeccCCCCCCCccccccCchhhhh------hhcccchhhhhccCcCCCCccccCCCCCC
Q 014199 139 KMCFKFIYSGSCPRGEKCNFRHDTDAREQ------CLRGVCLDFIIKGKCEKGPECSYKHSLQN 196 (429)
Q Consensus 139 ~~c~~~~~~g~~~~g~~~~~~~~~~~~~~------~~~~~c~~f~~~g~~~~Gr~~~~~h~~~~ 196 (429)
.+|..|...|.|+.|+.|+|.|+...... +...+|..|.+.|.|..|.+|.+.|...+
T Consensus 13 ~~C~~f~~~G~C~~G~~C~f~H~~~e~~~~~~~~~~k~~~C~~f~~~G~C~~G~~C~f~H~~~e 76 (77)
T 1m9o_A 13 ELCRTYSESGRCRYGAKCQFAHGLGELRQANRHPKYKTELCHKFKLQGRCPYGSRCHFIHNPTE 76 (77)
T ss_dssp CCCSGGGGTSCCTTTTTCSSCSSSCCGGGTC---------------------------------
T ss_pred hhCHHhhhCCCcCCCCCccCCCCChhhccccccccccCCcccchhhCcCCCCcCcCCCCCCCCC
Confidence 47988888899999999999999754432 23568999999999999999999998654
No 28
>2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1
Probab=96.03 E-value=0.0044 Score=50.79 Aligned_cols=49 Identities=27% Similarity=0.712 Sum_probs=43.4
Q ss_pred CcceeeeccCCCCCCCccccccCchhhhhhhcccchhhhhccCcCCCCccccCCCCCC
Q 014199 139 KMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHSLQN 196 (429)
Q Consensus 139 ~~c~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~~c~~f~~~g~~~~Gr~~~~~h~~~~ 196 (429)
.+|..| ..|.|..|+.|+|.|+ ..+|+.|.+.|.|..|.+|.+.|....
T Consensus 14 ~lC~~f-~~G~C~~G~~C~f~H~--------~~~C~~f~~~G~C~~G~~C~f~H~~~~ 62 (98)
T 2cqe_A 14 ELCKFY-ITGFCARAENCPYMHG--------DFPCKLYHTTGNCINGDDCMFSHDPLT 62 (98)
T ss_dssp SBCTTT-TTTCCSCSTTCSSBSS--------SSBCSHHHHTSCCSSCTTCSSBCCCCC
T ss_pred ccCccc-ccCcCCCCCCCCCCCC--------CCcCcCcccCCcCCCCCCCcccCCCCc
Confidence 478877 4799999999999999 367999999999999999999998664
No 29
>3d2q_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 1.50A {Homo sapiens} PDB: 3d2s_A
Probab=95.97 E-value=0.0038 Score=47.85 Aligned_cols=54 Identities=35% Similarity=0.912 Sum_probs=42.8
Q ss_pred CcceeeeccCCCCCCC-ccccccCchh----hhhhhcccchhhhhccCcCCCCccccCCCCC
Q 014199 139 KMCFKFIYSGSCPRGE-KCNFRHDTDA----REQCLRGVCLDFIIKGKCEKGPECSYKHSLQ 195 (429)
Q Consensus 139 ~~c~~~~~~g~~~~g~-~~~~~~~~~~----~~~~~~~~c~~f~~~g~~~~Gr~~~~~h~~~ 195 (429)
.+|+.| ..|.|.+|+ .|+|.|+... .......+|.+|+. |.|.+| +|.+.|.+.
T Consensus 7 ~vC~~f-~~G~C~rg~~~C~f~H~~~~~~~~~~~~~~~vC~~flk-G~C~r~-~C~y~H~~~ 65 (70)
T 3d2q_A 7 EVCREY-QRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIK-GRCSRE-KCKYFHPPA 65 (70)
T ss_dssp EBCHHH-HTTCCSSCTTTCSSBCCCTTSCCBTTTTEEEBCHHHHT-TCCCCT-TCCSBCCCH
T ss_pred hhCHHH-hcCCCCCCCCCCCCccCcccccccccCCcceeccccCc-CCCCCC-CcCeeCCHH
Confidence 378888 679999999 5999998753 23334568999886 899999 999999764
No 30
>3bl9_A Scavenger mRNA-decapping enzyme DCPS; ligand complex, cytoplasm, hydrolase, nonsense-mediated mRNA decay, nucleus, polymorphism, structural genomics; HET: DD2; 1.80A {Homo sapiens} SCOP: d.13.1.3 d.246.1.1 PDB: 3bl7_A* 3bla_A*
Probab=95.01 E-value=0.077 Score=51.75 Aligned_cols=86 Identities=14% Similarity=0.098 Sum_probs=55.5
Q ss_pred CcceEEEECCe---EEEEec-C----CCCCCCeEEEEeccc-cCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCC---ce-
Q 014199 226 ESHLIVSVGEY---YYCALP-K----GPLVEDHVLVIPVEH-VPNTISTSPECEKELGRFQNSLMMYYKN-QGK---EA- 291 (429)
Q Consensus 226 ~~hlIvs~g~~---~yl~l~-k----gPl~~GH~LIIP~~H-~~s~~~l~~e~~~Ei~~~~~~L~~~~~~-~g~---~~- 291 (429)
+..-|++.+++ -||++| . .|+..-|+|+||.+| +.|+.+|..+-..=+.++.....+++.. +|. .+
T Consensus 149 E~e~ilyeD~d~~~gFvllpDlkWd~~~~~~lhlLaI~~~~~I~SlrdL~~~HlpLL~~M~~~~~~~i~~~y~~~~~~~r 228 (301)
T 3bl9_A 149 EADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAILQRYRMKGDHLR 228 (301)
T ss_dssp SGGGCCEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHHHCCCGGGEE
T ss_pred ccccEEEecCCCCcCEEEeccCccCCCcccccEEEEEecccCCCChHHCCHhHHHHHHHHHHHHHHHHHHhcCCChHHeE
Confidence 33456667665 256555 2 389999999999998 9999999887655555555555555443 232 22
Q ss_pred EEEeecCCCCceeEEEEEecC
Q 014199 292 VFFEWLSKRGTHANLQAVPIP 312 (429)
Q Consensus 292 v~~E~~~~~~~H~HihvVPvp 312 (429)
++|=... ...|+|+|+|-+-
T Consensus 229 lgfHy~P-S~yHLHlHvis~~ 248 (301)
T 3bl9_A 229 VYLHYLP-SYYHLHVHFTALG 248 (301)
T ss_dssp EEEESSC-SSSSCEEEEEETT
T ss_pred EEecCCC-CcceEEEEEEecC
Confidence 2222111 2469999999864
No 31
>2d9n_A Cleavage and polyadenylation specificity factor, 30 kDa subunit; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.00 E-value=0.014 Score=45.56 Aligned_cols=53 Identities=26% Similarity=0.689 Sum_probs=43.8
Q ss_pred CcceeeeccCCCCCCCccccccCchhhhhhhcccchhhhhccCcCCCCccccCCCCCC
Q 014199 139 KMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHSLQN 196 (429)
Q Consensus 139 ~~c~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~~c~~f~~~g~~~~Gr~~~~~h~~~~ 196 (429)
.+|+.|.. |.|.+|+.|.|.|+..... ..+|..|...|.|. |.+|.+.|....
T Consensus 11 ~~C~~fl~-G~C~~G~~C~fsH~~~~~~---~~~C~~f~~~G~C~-~~~C~f~H~~~~ 63 (77)
T 2d9n_A 11 VVCKHWLR-GLCKKGDQCEFLHEYDMTK---MPECYFYSKFGECS-NKECPFLHIDPE 63 (77)
T ss_dssp SBCHHHHT-TCCSCTTSSSSBCSCCTTT---SCBCHHHHHTCCCC-CSSCSSBCCCTT
T ss_pred eeCHhHcc-CcCCCCCCCCCccccccCc---CCCCcccCCCCccC-CCCeeccCCCcc
Confidence 47988887 9999999999999976432 24798888879999 899999998753
No 32
>3d2n_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 2.70A {Homo sapiens}
Probab=94.96 E-value=0.014 Score=46.26 Aligned_cols=55 Identities=31% Similarity=0.780 Sum_probs=43.3
Q ss_pred CcceeeeccCCCCCCC-ccccccCchhh--hhhhcccchhhhhccCcCCCCccccCCCCCC
Q 014199 139 KMCFKFIYSGSCPRGE-KCNFRHDTDAR--EQCLRGVCLDFIIKGKCEKGPECSYKHSLQN 196 (429)
Q Consensus 139 ~~c~~~~~~g~~~~g~-~~~~~~~~~~~--~~~~~~~c~~f~~~g~~~~Gr~~~~~h~~~~ 196 (429)
.+|++|.. |.|.+|+ .|+|.|++... ....-.+|.+|+ +|.|.++ .|++.|.+..
T Consensus 10 ~VCr~Flr-G~C~r~d~~C~f~H~~~~~~~~~~~~~vC~dfl-kG~C~r~-~C~y~H~~~~ 67 (83)
T 3d2n_A 10 EVCREFQR-GTCSRPDTECKFAHPSKSCQVENGRVIACFDSL-KGRCSRE-NCKYLHPPPH 67 (83)
T ss_dssp EBCTTGGG-TCCCSCTTTCSSBCCCTTCCEETTEEECCHHHH-TTCCCCS-SCSSCCCCHH
T ss_pred hhcHHHhc-CCCCCCCCCCCCcCCCccccccCCceeehhHhh-hccccCC-CcceeCChHH
Confidence 37999998 9999997 99999998542 122246799985 6889998 8999998763
No 33
>1vlr_A MRNA decapping enzyme; 16740816, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.83A {Mus musculus} SCOP: d.13.1.3 d.246.1.1 PDB: 1xmm_B* 1xml_B 1st0_B* 1st4_B*
Probab=94.58 E-value=0.086 Score=52.25 Aligned_cols=86 Identities=14% Similarity=0.094 Sum_probs=54.7
Q ss_pred CcceEEEECCe---EEEEec-C----CCCCCCeEEEEeccc-cCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCC---ce-
Q 014199 226 ESHLIVSVGEY---YYCALP-K----GPLVEDHVLVIPVEH-VPNTISTSPECEKELGRFQNSLMMYYKN-QGK---EA- 291 (429)
Q Consensus 226 ~~hlIvs~g~~---~yl~l~-k----gPl~~GH~LIIP~~H-~~s~~~l~~e~~~Ei~~~~~~L~~~~~~-~g~---~~- 291 (429)
+..-||+.++. -||++| . .|+..=|+|+||.+| +.|+.+|..+-..=|.++.....+++.. +|. .+
T Consensus 196 E~e~vlyeD~d~~~gFvllpDlKWd~~~~~~lhlLaI~~~~dI~SlRdL~~~HlpLL~~M~~~~~~ii~~~yg~~~~~lR 275 (350)
T 1vlr_A 196 EADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILREGQEAILKRYQVTGDRLR 275 (350)
T ss_dssp --CCCSEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHHHCCCGGGEE
T ss_pred ccccEEEecCCCCCCeEEeccCccCCCccccceEEEEecccCCCChHHCCHhHHHHHHHHHHHHHHHHHHhcCCChHHeE
Confidence 33346667655 266665 2 489999999999998 9999999887655555555555555443 232 22
Q ss_pred EEEeecCCCCceeEEEEEecC
Q 014199 292 VFFEWLSKRGTHANLQAVPIP 312 (429)
Q Consensus 292 v~~E~~~~~~~H~HihvVPvp 312 (429)
++|=+.. ...|+|+|||-+-
T Consensus 276 lgfHy~P-S~yHLHlHvis~~ 295 (350)
T 1vlr_A 276 VYLHYLP-SYYHLHVHFTALG 295 (350)
T ss_dssp EEEESSC-SSSSCEEEEEETT
T ss_pred EEecCCC-CcceEEEEEEecc
Confidence 2222111 2469999999864
No 34
>2e5s_A Otthump00000018578; ZF-CCCHX2 domain, muscleblind-like 2, isoform 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.95 E-value=0.013 Score=47.92 Aligned_cols=55 Identities=36% Similarity=0.893 Sum_probs=44.1
Q ss_pred CcceeeeccCCCCCCC-ccccccCchhh----hhhhcccchhhhhccCcCCCCccccCCCCCC
Q 014199 139 KMCFKFIYSGSCPRGE-KCNFRHDTDAR----EQCLRGVCLDFIIKGKCEKGPECSYKHSLQN 196 (429)
Q Consensus 139 ~~c~~~~~~g~~~~g~-~~~~~~~~~~~----~~~~~~~c~~f~~~g~~~~Gr~~~~~h~~~~ 196 (429)
.+|+.|.. |.|.+|+ .|+|.|++... ......+|.+|+. |.|.+| +|++.|.+..
T Consensus 21 ~VCr~Flr-G~C~rgd~~C~FsH~~~~~~~~~~~~~~~vC~~flk-G~C~r~-~C~y~H~~~~ 80 (98)
T 2e5s_A 21 EVCREFQR-GNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIK-GRCMRE-KCKYFHPPAH 80 (98)
T ss_dssp EBCSHHHH-TCCSSHHHHCSSBCCSSCCSCCTTTCEEEBCHHHHH-TCCCCT-TCCSBCCCHH
T ss_pred hhhHHHhc-CcCCCCCCCCCCcCCchhccccccCCccccchhhcc-CCCCCC-CcCccCChHH
Confidence 48999988 9999999 79999998532 2334568998875 899999 9999998653
No 35
>2rhk_C Cleavage and polyadenylation specificity factor subunit 4; influenza A, nonstructural protein, viral protein: HOST complex, Zn finger; 1.95A {Homo sapiens}
Probab=93.87 E-value=0.023 Score=43.78 Aligned_cols=53 Identities=26% Similarity=0.704 Sum_probs=42.8
Q ss_pred CcceeeeccCCCCCCCccccccCchhhhhhhcccchhhhhccCcCCCCccccCCCCCC
Q 014199 139 KMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHSLQN 196 (429)
Q Consensus 139 ~~c~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~~c~~f~~~g~~~~Gr~~~~~h~~~~ 196 (429)
.+|+.|.. |.|.+|+.|.|.|+..... ..+|..|+..|.|.. .+|.+.|...+
T Consensus 17 ~vCk~fl~-G~C~~G~~C~fsH~~~~~~---~~~C~~f~~~G~C~~-~~C~y~H~~p~ 69 (72)
T 2rhk_C 17 VVCKHWLR-GLCKKGDQCEFLHEYDMTK---MSECYFYSKFGECSN-KECPFLHIDPE 69 (72)
T ss_dssp SBCHHHHT-TCCCCGGGSSSBCSCCTTS---CCBCHHHHHHSCCSB-TTCCSBCCCCC
T ss_pred eeCHHHhc-CCCCCCCCCCCcccccccc---CCcccccCCCCCCCC-CCeeccCCCcc
Confidence 48988887 9999999999999975432 247888887788888 88999987643
No 36
>2rpp_A Muscleblind-like protein 2; zinc finger domain, C3H, alternative splicing, cytoplasm, metal-binding, nucleus, RNA-binding, zinc, zinc-finger; NMR {Homo sapiens}
Probab=93.78 E-value=0.027 Score=45.25 Aligned_cols=54 Identities=31% Similarity=0.795 Sum_probs=43.2
Q ss_pred CcceeeeccCCCCCCC-ccccccCchh--hhhhhcccchhhhhccCcCCCCccccCCCCC
Q 014199 139 KMCFKFIYSGSCPRGE-KCNFRHDTDA--REQCLRGVCLDFIIKGKCEKGPECSYKHSLQ 195 (429)
Q Consensus 139 ~~c~~~~~~g~~~~g~-~~~~~~~~~~--~~~~~~~~c~~f~~~g~~~~Gr~~~~~h~~~ 195 (429)
.+|++|.. |.|.+++ .|+|.|++.. .....-.+|.+|+ +|.|.++ .|++.|.+.
T Consensus 18 ~VCrdFlr-G~C~r~d~~CrfsH~~~~~~v~~~~~~vC~dfl-kG~C~r~-~Cky~H~~~ 74 (89)
T 2rpp_A 18 EVCRQFQR-GTCSRSDEECKFAHPPKSCQVENGRVIACFDSL-KGRCSRE-NCKYLHPPT 74 (89)
T ss_dssp CBCHHHHH-TCCCCCTTTSSSBCCCSSSCCBTTBEEBCHHHH-HTCCCCT-TCCSBCCCH
T ss_pred hhchHHhc-CCCCCCCCCCCCcCCCccccccCCceeeehhhh-hCcCCCC-CcceecCHH
Confidence 48999998 9999998 9999999764 2222346899996 7889888 899988765
No 37
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=90.01 E-value=2 Score=42.43 Aligned_cols=63 Identities=13% Similarity=-0.069 Sum_probs=39.8
Q ss_pred eEEEEec-cccCCCCCCCHHHHHHHHHH-HHHHHHHHHhcCCceEEEee---cCCC-CceeEEEEEecCc
Q 014199 250 HVLVIPV-EHVPNTISTSPECEKELGRF-QNSLMMYYKNQGKEAVFFEW---LSKR-GTHANLQAVPIPT 313 (429)
Q Consensus 250 H~LIIP~-~H~~s~~~l~~e~~~Ei~~~-~~~L~~~~~~~g~~~v~~E~---~~~~-~~H~HihvVPvp~ 313 (429)
|-+||=- .|..++.+++.+.+..+..+ ++.+..+. ..-.-|.+||+ .++. ..|-|.|++-.|.
T Consensus 106 ~~VIi~sp~H~~~l~~l~~~~~~~vi~~~~~r~~~l~-~~~~yV~iF~N~G~~~G~Sl~HpH~Qi~a~~~ 174 (348)
T 1gup_A 106 SRVICFSPDHSKTLPELSVAALTEIVKTWQEQTAELG-KTYPWVQVFENKGAAMGCSNPHPGGQIWANSF 174 (348)
T ss_dssp EEEEESCSCTTCCGGGSCHHHHHHHHHHHHHHHHHHH-HHCSEEEEEEEESGGGTCSCCSSEEEEEEESS
T ss_pred EEEEEcCCcccCChhhCCHHHHHHHHHHHHHHHHHHh-hcCCEEEEecccCCcCCcCCCCCceeEEeccc
Confidence 4555544 89999999998887777754 44555544 32223556662 2232 4799999986543
No 38
>2pof_A CDP-diacylglycerol pyrophosphatase; NYSGXRC, PFAM02611, PSI-2, phospholipid biosynthesis structural genomics, protein structure initiative; 1.40A {Escherichia coli} SCOP: d.13.1.4
Probab=60.23 E-value=12 Score=34.75 Aligned_cols=88 Identities=15% Similarity=0.138 Sum_probs=58.3
Q ss_pred CCCeEEEEeccccCCCCCC------CHHHHHHHHHHHHHHHHHHHh-cCCceEEEee--cCCCC-ceeEEEEEecCcchH
Q 014199 247 VEDHVLVIPVEHVPNTIST------SPECEKELGRFQNSLMMYYKN-QGKEAVFFEW--LSKRG-THANLQAVPIPTSKA 316 (429)
Q Consensus 247 ~~GH~LIIP~~H~~s~~~l------~~e~~~Ei~~~~~~L~~~~~~-~g~~~v~~E~--~~~~~-~H~HihvVPvp~~~~ 316 (429)
-+-|.|+||...+.-+.+- .+.-|.+-+.....+.+.+.+ -.-+.+...+ ..+++ .|+|||+--+ -
T Consensus 48 Gp~qyLLmPt~rItGIEsP~Ll~~~~pnYf~~AW~aR~~v~~~~g~pipd~~lsLaINS~~gRSQnQLHIHIsCl----r 123 (227)
T 2pof_A 48 GPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCI----R 123 (227)
T ss_dssp SSSCEEEEESSCCCSTTCGGGGSTTSCCHHHHHHHTTHHHHHHHTSCCCGGGEEEEEBCGGGCSCCSCCEEEEEB----C
T ss_pred CCceEEEeccccccCccChhhcCCCCCcHHHHHHHHhHHHHHhhCCCCCccceEEEecCCCCccccceeeehhhC----C
Confidence 4569999999999887752 456788888877777777764 2223344441 23333 5888887765 3
Q ss_pred HHHHHHHHHHHHHcCCcceecc
Q 014199 317 AAVQDIFNLAAEKLGFKFLATK 338 (429)
Q Consensus 317 ~~~~~~F~~~~~~~~~~~~~~~ 338 (429)
.++...+...+...+..|..++
T Consensus 124 p~V~~~L~~~~~~i~~~W~~lp 145 (227)
T 2pof_A 124 PDVREQLDNNLANISSRWLPLP 145 (227)
T ss_dssp HHHHHHHHTTGGGCCSSCEECT
T ss_pred HHHHHHHHHhccccCCCceECC
Confidence 4566666666677788898654
No 39
>1m9o_A Tristetraproline; Cys3His type zinc finger, metal binding protein; NMR {Mus musculus} SCOP: g.66.1.1 PDB: 1rgo_A
Probab=56.70 E-value=2.3 Score=32.26 Aligned_cols=24 Identities=42% Similarity=1.144 Sum_probs=0.0
Q ss_pred CcceeeeccCCCCCCCccccccCc
Q 014199 139 KMCFKFIYSGSCPRGEKCNFRHDT 162 (429)
Q Consensus 139 ~~c~~~~~~g~~~~g~~~~~~~~~ 162 (429)
.+|..|...|.|+.|..|+|.|..
T Consensus 51 ~~C~~f~~~G~C~~G~~C~f~H~~ 74 (77)
T 1m9o_A 51 ELCHKFKLQGRCPYGSRCHFIHNP 74 (77)
T ss_dssp ------------------------
T ss_pred CcccchhhCcCCCCcCcCCCCCCC
Confidence 479999999999999999999975
No 40
>2fc6_A Nuclear, target of EGR1, member 1; structure genomics, ZF-CCCH domain, member 1(nuclear), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.66.1.1
Probab=53.89 E-value=3.3 Score=29.35 Aligned_cols=26 Identities=35% Similarity=0.713 Sum_probs=23.0
Q ss_pred CCCcceeeeccCCCCCCCccccccCc
Q 014199 137 GDKMCFKFIYSGSCPRGEKCNFRHDT 162 (429)
Q Consensus 137 ~~~~c~~~~~~g~~~~g~~~~~~~~~ 162 (429)
...+|..|+.-|-||.|..|.+.||-
T Consensus 19 ~~~iC~~FSayGwCp~G~~Cp~SHDi 44 (50)
T 2fc6_A 19 PTSICDNFSAYGWCPLGPQCPQSHDI 44 (50)
T ss_dssp CSCBCSHHHHTCCCTTGGGCSSBCCC
T ss_pred ccchhhhccccccCCCCCCCCccccC
Confidence 34589999999999999999999985
No 41
>2d9m_A Zinc finger CCCH-type domain containing protein 7A; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.86 E-value=3.9 Score=31.07 Aligned_cols=29 Identities=28% Similarity=0.887 Sum_probs=24.3
Q ss_pred CcceeeeccCCCCCCCccccccCchhhhhh
Q 014199 139 KMCFKFIYSGSCPRGEKCNFRHDTDAREQC 168 (429)
Q Consensus 139 ~~c~~~~~~g~~~~g~~~~~~~~~~~~~~~ 168 (429)
.+|..| ..|+|+-|+.|.|.|-.....+.
T Consensus 21 ~LC~~~-~~G~C~~G~~C~FAHG~~ELr~~ 49 (69)
T 2d9m_A 21 SICDRY-MNGTCPEGNSCKFAHGNAELHEW 49 (69)
T ss_dssp SBCHHH-HHSCCSSCSSCSSBSSHHHHHHH
T ss_pred ccCccc-CcCCCCCCCccCCcCCHHHHhhH
Confidence 489999 78999999999999997665443
No 42
>2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1
Probab=47.38 E-value=5.8 Score=31.93 Aligned_cols=25 Identities=32% Similarity=0.697 Sum_probs=22.5
Q ss_pred CcceeeeccCCCCCCCccccccCch
Q 014199 139 KMCFKFIYSGSCPRGEKCNFRHDTD 163 (429)
Q Consensus 139 ~~c~~~~~~g~~~~g~~~~~~~~~~ 163 (429)
.+|+.|...|.|+.|..|+|.|+..
T Consensus 37 ~~C~~f~~~G~C~~G~~C~f~H~~~ 61 (98)
T 2cqe_A 37 FPCKLYHTTGNCINGDDCMFSHDPL 61 (98)
T ss_dssp SBCSHHHHTSCCSSCTTCSSBCCCC
T ss_pred CcCcCcccCCcCCCCCCCcccCCCC
Confidence 4799998999999999999999964
No 43
>2rpp_A Muscleblind-like protein 2; zinc finger domain, C3H, alternative splicing, cytoplasm, metal-binding, nucleus, RNA-binding, zinc, zinc-finger; NMR {Homo sapiens}
Probab=36.50 E-value=18 Score=28.69 Aligned_cols=25 Identities=32% Similarity=0.836 Sum_probs=22.2
Q ss_pred ccchhhhhccCcCCCC-ccccCCCCCC
Q 014199 171 GVCLDFIIKGKCEKGP-ECSYKHSLQN 196 (429)
Q Consensus 171 ~~c~~f~~~g~~~~Gr-~~~~~h~~~~ 196 (429)
.||.+|+. |.|.+|. +|+|.|....
T Consensus 18 ~VCrdFlr-G~C~r~d~~CrfsH~~~~ 43 (89)
T 2rpp_A 18 EVCRQFQR-GTCSRSDEECKFAHPPKS 43 (89)
T ss_dssp CBCHHHHH-TCCCCCTTTSSSBCCCSS
T ss_pred hhchHHhc-CCCCCCCCCCCCcCCCcc
Confidence 68999998 9999998 8999998765
No 44
>3d2q_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 1.50A {Homo sapiens} PDB: 3d2s_A
Probab=33.08 E-value=21 Score=26.66 Aligned_cols=25 Identities=28% Similarity=0.996 Sum_probs=21.2
Q ss_pred ccchhhhhccCcCCCC-ccccCCCCCC
Q 014199 171 GVCLDFIIKGKCEKGP-ECSYKHSLQN 196 (429)
Q Consensus 171 ~~c~~f~~~g~~~~Gr-~~~~~h~~~~ 196 (429)
.+|.+| +.|.|.+|. .|.|.|....
T Consensus 7 ~vC~~f-~~G~C~rg~~~C~f~H~~~~ 32 (70)
T 3d2q_A 7 EVCREY-QRGNCNRGENDCRFAHPADS 32 (70)
T ss_dssp EBCHHH-HTTCCSSCTTTCSSBCCCTT
T ss_pred hhCHHH-hcCCCCCCCCCCCCccCccc
Confidence 589999 689999999 5999997653
No 45
>3d2n_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 2.70A {Homo sapiens}
Probab=32.60 E-value=23 Score=27.59 Aligned_cols=26 Identities=31% Similarity=0.775 Sum_probs=22.1
Q ss_pred cccchhhhhccCcCCCC-ccccCCCCCC
Q 014199 170 RGVCLDFIIKGKCEKGP-ECSYKHSLQN 196 (429)
Q Consensus 170 ~~~c~~f~~~g~~~~Gr-~~~~~h~~~~ 196 (429)
..+|.+|.. |.|.+|. +|+|.|.+..
T Consensus 9 ~~VCr~Flr-G~C~r~d~~C~f~H~~~~ 35 (83)
T 3d2n_A 9 LEVCREFQR-GTCSRPDTECKFAHPSKS 35 (83)
T ss_dssp EEBCTTGGG-TCCCSCTTTCSSBCCCTT
T ss_pred chhcHHHhc-CCCCCCCCCCCCcCCCcc
Confidence 368999998 9999995 8999998764
No 46
>2fc6_A Nuclear, target of EGR1, member 1; structure genomics, ZF-CCCH domain, member 1(nuclear), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.66.1.1
Probab=28.14 E-value=23 Score=25.05 Aligned_cols=27 Identities=30% Similarity=0.749 Sum_probs=24.3
Q ss_pred hcccchhhhhccCcCCCCccccCCCCC
Q 014199 169 LRGVCLDFIIKGKCEKGPECSYKHSLQ 195 (429)
Q Consensus 169 ~~~~c~~f~~~g~~~~Gr~~~~~h~~~ 195 (429)
...+|.+|-+.|=|..|.+|.+.|.++
T Consensus 19 ~~~iC~~FSayGwCp~G~~Cp~SHDiD 45 (50)
T 2fc6_A 19 PTSICDNFSAYGWCPLGPQCPQSHDIS 45 (50)
T ss_dssp CSCBCSHHHHTCCCTTGGGCSSBCCCC
T ss_pred ccchhhhccccccCCCCCCCCccccCC
Confidence 347899999999999999999999875
No 47
>2e5s_A Otthump00000018578; ZF-CCCHX2 domain, muscleblind-like 2, isoform 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.62 E-value=15 Score=29.46 Aligned_cols=33 Identities=24% Similarity=0.643 Sum_probs=25.6
Q ss_pred CcceeeeccCCCCCCCccccccCchhhhhhhcccc
Q 014199 139 KMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVC 173 (429)
Q Consensus 139 ~~c~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~~c 173 (429)
.+|..|.. |.|..+ .|+|.|.+...+...+..|
T Consensus 57 ~vC~~flk-G~C~r~-~C~y~H~~~~l~~~~~~~~ 89 (98)
T 2e5s_A 57 TVCMDYIK-GRCMRE-KCKYFHPPAHLQAKIKAAQ 89 (98)
T ss_dssp EBCHHHHH-TCCCCT-TCCSBCCCHHHHHHHHHHH
T ss_pred ccchhhcc-CCCCCC-CcCccCChHHHHHHHHHHH
Confidence 47888765 999999 9999999877666555443
No 48
>2d9n_A Cleavage and polyadenylation specificity factor, 30 kDa subunit; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.40 E-value=53 Score=24.77 Aligned_cols=25 Identities=32% Similarity=0.820 Sum_probs=21.6
Q ss_pred ccchhhhhccCcCCCCccccCCCCCC
Q 014199 171 GVCLDFIIKGKCEKGPECSYKHSLQN 196 (429)
Q Consensus 171 ~~c~~f~~~g~~~~Gr~~~~~h~~~~ 196 (429)
.+|..|.. |.|..|.+|.+.|....
T Consensus 11 ~~C~~fl~-G~C~~G~~C~fsH~~~~ 35 (77)
T 2d9n_A 11 VVCKHWLR-GLCKKGDQCEFLHEYDM 35 (77)
T ss_dssp SBCHHHHT-TCCSCTTSSSSBCSCCT
T ss_pred eeCHhHcc-CcCCCCCCCCCcccccc
Confidence 57887777 99999999999998764
Done!